Query 015435
Match_columns 407
No_of_seqs 142 out of 1775
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 06:17:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015435.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015435hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1448 TyrB Aspartate/tyrosin 100.0 8.3E-60 1.8E-64 416.2 38.1 395 6-402 1-395 (396)
2 PTZ00376 aspartate aminotransf 100.0 7.2E-55 1.6E-59 416.7 43.2 399 6-405 4-403 (404)
3 PRK09257 aromatic amino acid a 100.0 1.5E-54 3.3E-59 413.9 43.5 393 6-403 1-396 (396)
4 PLN02397 aspartate transaminas 100.0 7.7E-54 1.7E-58 410.5 44.7 399 5-404 22-420 (423)
5 COG0436 Aspartate/tyrosine/aro 100.0 5.1E-54 1.1E-58 404.3 34.6 346 31-406 28-392 (393)
6 KOG1411 Aspartate aminotransfe 100.0 1.5E-52 3.2E-57 362.1 31.5 400 5-405 26-425 (427)
7 KOG1412 Aspartate aminotransfe 100.0 3.3E-51 7.2E-56 349.0 36.5 403 4-406 3-406 (410)
8 PLN00175 aminotransferase fami 100.0 4.3E-48 9.3E-53 370.0 33.5 361 6-405 32-413 (413)
9 KOG0257 Kynurenine aminotransf 100.0 2.4E-48 5.2E-53 346.9 23.6 338 36-400 36-414 (420)
10 PRK08636 aspartate aminotransf 100.0 5.4E-47 1.2E-51 362.5 34.7 369 7-406 7-401 (403)
11 PRK07366 succinyldiaminopimela 100.0 4.3E-47 9.3E-52 362.0 33.0 365 7-403 4-388 (388)
12 PLN02187 rooty/superroot1 100.0 1.4E-46 3E-51 363.1 35.5 365 16-406 47-439 (462)
13 PTZ00377 alanine aminotransfer 100.0 1.9E-46 4.2E-51 365.5 36.0 359 29-405 44-475 (481)
14 PRK07681 aspartate aminotransf 100.0 1.4E-46 3.1E-51 359.4 33.6 362 6-401 5-384 (399)
15 PLN00143 tyrosine/nicotianamin 100.0 2.3E-46 5.1E-51 358.1 34.3 360 19-405 20-404 (409)
16 PRK06348 aspartate aminotransf 100.0 2E-46 4.4E-51 356.5 33.6 360 7-402 7-382 (384)
17 PRK13355 bifunctional HTH-doma 100.0 2.5E-46 5.4E-51 367.6 35.0 373 7-405 120-514 (517)
18 PRK06855 aminotransferase; Val 100.0 7.2E-46 1.6E-50 356.8 36.0 355 29-405 30-429 (433)
19 PRK09148 aminotransferase; Val 100.0 5E-46 1.1E-50 355.7 33.9 367 6-406 3-391 (405)
20 PRK06207 aspartate aminotransf 100.0 5.7E-46 1.2E-50 355.0 33.8 346 30-406 38-403 (405)
21 PRK08068 transaminase; Reviewe 100.0 5.4E-46 1.2E-50 354.4 33.2 361 8-401 7-385 (389)
22 PLN02656 tyrosine transaminase 100.0 1.2E-45 2.5E-50 353.6 35.4 365 17-405 16-403 (409)
23 TIGR03540 DapC_direct LL-diami 100.0 7.4E-46 1.6E-50 353.0 33.3 361 8-401 4-382 (383)
24 PRK09147 succinyldiaminopimela 100.0 1.4E-45 2.9E-50 352.4 35.1 362 8-404 3-395 (396)
25 PRK07682 hypothetical protein; 100.0 8.5E-46 1.8E-50 352.0 32.7 341 31-406 20-377 (378)
26 PLN00145 tyrosine/nicotianamin 100.0 2.2E-45 4.7E-50 352.6 35.4 353 30-406 51-425 (430)
27 PRK05942 aspartate aminotransf 100.0 1.6E-45 3.4E-50 351.6 33.3 341 29-402 33-389 (394)
28 PRK09276 LL-diaminopimelate am 100.0 1.5E-45 3.3E-50 351.2 32.7 363 6-401 4-384 (385)
29 PLN02231 alanine transaminase 100.0 5.4E-45 1.2E-49 355.4 37.2 354 29-405 127-527 (534)
30 PRK06107 aspartate aminotransf 100.0 2.8E-45 6E-50 350.6 34.3 372 1-406 1-401 (402)
31 PRK06290 aspartate aminotransf 100.0 6.2E-45 1.4E-49 347.3 35.2 343 29-406 42-406 (410)
32 PRK08912 hypothetical protein; 100.0 2.9E-45 6.3E-50 349.3 32.8 360 8-405 6-386 (387)
33 PRK08960 hypothetical protein; 100.0 6.6E-45 1.4E-49 346.7 35.2 361 7-404 6-386 (387)
34 TIGR01264 tyr_amTase_E tyrosin 100.0 5.1E-45 1.1E-49 349.1 33.9 367 15-406 13-400 (401)
35 PRK07683 aminotransferase A; V 100.0 6.7E-45 1.4E-49 346.2 33.7 362 6-405 5-383 (387)
36 PRK12414 putative aminotransfe 100.0 4.3E-45 9.3E-50 347.2 31.8 356 7-401 8-383 (384)
37 PLN02450 1-aminocyclopropane-1 100.0 2E-44 4.3E-49 348.7 34.6 348 30-405 37-430 (468)
38 PRK07337 aminotransferase; Val 100.0 2.1E-44 4.5E-49 343.5 34.1 360 7-403 4-387 (388)
39 PRK05957 aspartate aminotransf 100.0 2.4E-44 5.2E-49 342.6 34.4 366 6-405 4-385 (389)
40 PRK07309 aromatic amino acid a 100.0 4.3E-44 9.3E-49 341.2 35.5 364 6-406 7-389 (391)
41 PRK06108 aspartate aminotransf 100.0 3.2E-44 6.9E-49 342.2 33.9 343 31-405 24-382 (382)
42 PRK05764 aspartate aminotransf 100.0 4.3E-44 9.3E-49 342.3 34.1 368 5-406 3-392 (393)
43 TIGR03538 DapC_gpp succinyldia 100.0 6.4E-44 1.4E-48 340.6 35.0 358 9-402 3-392 (393)
44 PRK07324 transaminase; Validat 100.0 1.5E-44 3.1E-49 341.8 30.2 334 29-405 24-370 (373)
45 PTZ00433 tyrosine aminotransfe 100.0 6.5E-44 1.4E-48 342.0 34.2 366 16-406 17-409 (412)
46 PRK08175 aminotransferase; Val 100.0 1.1E-43 2.4E-48 339.0 34.9 366 7-407 3-391 (395)
47 KOG0259 Tyrosine aminotransfer 100.0 2.4E-43 5.2E-48 309.3 33.5 367 16-406 42-434 (447)
48 PRK08637 hypothetical protein; 100.0 6.7E-43 1.5E-47 332.6 39.2 359 31-406 3-387 (388)
49 PLN02376 1-aminocyclopropane-1 100.0 3.4E-43 7.3E-48 341.1 37.2 346 31-404 46-437 (496)
50 PRK07550 hypothetical protein; 100.0 1.7E-43 3.6E-48 337.1 34.5 364 7-402 3-384 (386)
51 PRK09082 methionine aminotrans 100.0 5.3E-44 1.2E-48 340.1 30.6 336 31-401 30-385 (386)
52 COG1168 MalY Bifunctional PLP- 100.0 2.7E-43 5.8E-48 311.5 32.5 346 29-406 23-387 (388)
53 PLN02607 1-aminocyclopropane-1 100.0 2.3E-43 5E-48 338.7 34.7 349 29-405 45-437 (447)
54 PRK09265 aminotransferase AlaT 100.0 3.7E-43 7.9E-48 336.4 36.0 373 8-406 8-402 (404)
55 TIGR01265 tyr_nico_aTase tyros 100.0 2.4E-43 5.1E-48 337.4 34.1 368 14-406 12-402 (403)
56 PRK08361 aspartate aminotransf 100.0 9.5E-44 2.1E-48 339.2 31.2 365 7-406 11-391 (391)
57 PRK08363 alanine aminotransfer 100.0 2.8E-43 6.1E-48 336.7 33.9 350 28-405 27-394 (398)
58 PRK05839 hypothetical protein; 100.0 2.5E-43 5.4E-48 333.8 33.2 348 14-404 4-373 (374)
59 PRK07777 aminotransferase; Val 100.0 2.9E-43 6.3E-48 335.5 33.6 358 9-403 5-384 (387)
60 COG1167 ARO8 Transcriptional r 100.0 2.8E-43 6.1E-48 338.8 32.7 350 30-406 88-456 (459)
61 PRK07590 L,L-diaminopimelate a 100.0 2.5E-43 5.4E-48 337.9 31.7 341 30-403 33-409 (409)
62 PLN02368 alanine transaminase 100.0 2.8E-43 6.2E-48 333.7 31.6 346 5-366 10-403 (407)
63 PRK09275 aspartate aminotransf 100.0 2.4E-43 5.1E-48 339.1 29.0 339 32-405 101-517 (527)
64 PRK15481 transcriptional regul 100.0 4.9E-43 1.1E-47 338.2 31.2 333 31-405 85-431 (431)
65 PRK07568 aspartate aminotransf 100.0 1.7E-42 3.8E-47 331.7 33.8 365 6-405 3-392 (397)
66 TIGR03537 DapC succinyldiamino 100.0 1.9E-42 4.1E-47 325.4 33.0 331 32-401 1-349 (350)
67 TIGR03801 asp_4_decarbox aspar 100.0 2.9E-42 6.4E-47 331.1 29.4 339 32-405 95-516 (521)
68 PRK07865 N-succinyldiaminopime 100.0 5.9E-42 1.3E-46 323.9 30.8 345 6-400 3-363 (364)
69 PF00155 Aminotran_1_2: Aminot 100.0 1.1E-42 2.5E-47 329.4 24.8 345 32-399 2-363 (363)
70 TIGR03542 DAPAT_plant LL-diami 100.0 2.7E-41 5.8E-46 323.1 32.6 339 29-403 31-402 (402)
71 TIGR03539 DapC_actino succinyl 100.0 1.4E-41 3E-46 320.2 30.1 336 15-399 3-356 (357)
72 PRK01533 histidinol-phosphate 100.0 2.1E-41 4.6E-46 318.8 28.1 324 30-405 28-355 (366)
73 PRK02610 histidinol-phosphate 100.0 1.6E-40 3.4E-45 314.8 32.9 333 31-406 28-372 (374)
74 PRK06836 aspartate aminotransf 100.0 2.7E-40 5.9E-45 315.4 33.9 341 30-406 32-392 (394)
75 PRK06358 threonine-phosphate d 100.0 8E-40 1.7E-44 307.5 32.7 336 18-403 7-353 (354)
76 PRK03317 histidinol-phosphate 100.0 5.1E-40 1.1E-44 311.1 30.4 332 32-405 27-364 (368)
77 PRK14809 histidinol-phosphate 100.0 9.3E-40 2E-44 308.1 31.9 319 30-404 29-356 (357)
78 PRK09440 avtA valine--pyruvate 100.0 2.1E-39 4.5E-44 312.0 30.9 349 29-405 28-411 (416)
79 COG0079 HisC Histidinol-phosph 100.0 4E-39 8.6E-44 298.0 30.4 322 31-406 22-355 (356)
80 PLN02672 methionine S-methyltr 100.0 3.6E-39 7.9E-44 327.7 32.5 345 29-405 695-1080(1082)
81 PRK08056 threonine-phosphate d 100.0 1.2E-38 2.5E-43 300.2 32.4 338 15-404 5-354 (356)
82 PRK03158 histidinol-phosphate 100.0 4.5E-39 9.8E-44 303.9 27.9 320 31-402 29-358 (359)
83 PRK05166 histidinol-phosphate 100.0 8.9E-39 1.9E-43 302.7 29.7 325 30-403 35-369 (371)
84 PRK09105 putative aminotransfe 100.0 1.3E-38 2.8E-43 300.5 30.4 319 30-404 42-369 (370)
85 PLN03026 histidinol-phosphate 100.0 1.3E-38 2.9E-43 301.7 30.3 317 30-402 51-379 (380)
86 PRK08153 histidinol-phosphate 100.0 2.2E-38 4.7E-43 299.5 31.5 322 31-406 32-366 (369)
87 PRK07392 threonine-phosphate d 100.0 3.2E-38 7E-43 297.8 32.4 320 31-403 22-357 (360)
88 PRK05387 histidinol-phosphate 100.0 2E-38 4.3E-43 299.0 29.8 317 31-404 24-352 (353)
89 PRK06225 aspartate aminotransf 100.0 9.9E-38 2.1E-42 296.8 33.6 333 30-406 27-377 (380)
90 KOG0256 1-aminocyclopropane-1- 100.0 6.6E-38 1.4E-42 277.6 29.5 314 69-404 115-460 (471)
91 PRK04870 histidinol-phosphate 100.0 4.6E-38 9.9E-43 296.6 29.0 321 30-403 25-356 (356)
92 PRK14808 histidinol-phosphate 100.0 2.6E-37 5.7E-42 287.9 30.7 312 29-402 17-334 (335)
93 PRK14807 histidinol-phosphate 100.0 6.1E-37 1.3E-41 288.0 31.0 319 31-403 22-350 (351)
94 PRK02731 histidinol-phosphate 100.0 6.6E-37 1.4E-41 290.1 30.8 324 29-404 30-365 (367)
95 PRK07908 hypothetical protein; 100.0 1.7E-36 3.7E-41 284.9 32.9 319 27-405 18-347 (349)
96 PRK03967 histidinol-phosphate 100.0 5.5E-37 1.2E-41 286.3 29.1 313 30-407 17-336 (337)
97 PRK06959 putative threonine-ph 100.0 5.6E-37 1.2E-41 285.9 27.8 305 31-406 24-334 (339)
98 PRK06425 histidinol-phosphate 100.0 1E-36 2.2E-41 284.1 28.5 304 32-403 17-331 (332)
99 PRK01688 histidinol-phosphate 100.0 3.2E-37 6.9E-42 289.6 25.1 290 68-400 51-351 (351)
100 PRK05664 threonine-phosphate d 100.0 1.4E-36 2.9E-41 282.9 28.9 303 31-405 20-328 (330)
101 PRK03321 putative aminotransfe 100.0 7.1E-37 1.5E-41 288.1 27.2 324 31-405 22-351 (352)
102 PRK04781 histidinol-phosphate 100.0 1.2E-36 2.7E-41 286.8 27.9 297 68-403 53-361 (364)
103 TIGR01141 hisC histidinol-phos 100.0 5.3E-36 1.2E-40 281.7 27.6 317 31-400 19-346 (346)
104 PRK04635 histidinol-phosphate 100.0 3E-36 6.5E-41 283.6 25.8 311 31-401 31-351 (354)
105 TIGR01140 L_thr_O3P_dcar L-thr 100.0 7.3E-36 1.6E-40 278.1 26.9 317 15-399 2-329 (330)
106 KOG0634 Aromatic amino acid am 100.0 5.7E-35 1.2E-39 261.1 30.1 322 68-405 93-466 (472)
107 PRK00950 histidinol-phosphate 100.0 6.9E-35 1.5E-39 275.7 30.4 315 30-404 33-361 (361)
108 PRK08354 putative aminotransfe 100.0 1E-34 2.2E-39 268.1 29.4 294 30-402 7-309 (311)
109 PRK13238 tnaA tryptophanase/L- 100.0 9.4E-32 2E-36 258.2 30.1 339 28-404 33-432 (460)
110 cd00609 AAT_like Aspartate ami 100.0 2.2E-31 4.7E-36 250.9 30.8 333 34-400 1-349 (350)
111 KOG0258 Alanine aminotransfera 100.0 7.9E-31 1.7E-35 231.1 29.7 338 49-402 87-466 (475)
112 COG3977 Alanine-alpha-ketoisov 100.0 2.2E-29 4.8E-34 214.7 27.0 361 17-405 15-411 (417)
113 TIGR01822 2am3keto_CoA 2-amino 100.0 1.3E-27 2.8E-32 228.7 31.4 327 29-407 36-391 (393)
114 cd00617 Tnase_like Tryptophana 100.0 4.2E-28 9.1E-33 229.8 26.1 341 28-405 8-408 (431)
115 TIGR00707 argD acetylornithine 100.0 5.4E-28 1.2E-32 230.3 26.7 337 28-403 24-379 (379)
116 PRK02627 acetylornithine amino 100.0 4.2E-28 9.1E-33 232.3 25.8 338 28-406 36-395 (396)
117 PRK01278 argD acetylornithine 100.0 3.3E-28 7.2E-33 232.0 24.5 340 27-406 27-389 (389)
118 PRK06939 2-amino-3-ketobutyrat 100.0 1.3E-27 2.9E-32 229.1 27.4 334 29-407 40-395 (397)
119 PLN02822 serine palmitoyltrans 100.0 1E-27 2.3E-32 232.3 25.2 332 29-405 107-477 (481)
120 PRK10534 L-threonine aldolase; 100.0 1.1E-27 2.5E-32 223.9 24.2 316 34-404 2-332 (333)
121 TIGR01825 gly_Cac_T_rel pyrido 100.0 5.2E-27 1.1E-31 224.0 29.2 333 29-407 31-383 (385)
122 TIGR00858 bioF 8-amino-7-oxono 100.0 3.7E-27 8E-32 223.0 27.3 323 29-400 14-360 (360)
123 PLN02721 threonine aldolase 100.0 4.5E-27 9.8E-32 221.8 27.8 327 31-406 5-353 (353)
124 PRK03244 argD acetylornithine 100.0 3.6E-27 7.8E-32 225.7 26.0 333 28-406 40-395 (398)
125 PRK13392 5-aminolevulinate syn 100.0 2.6E-26 5.7E-31 220.4 28.5 329 30-407 45-399 (410)
126 TIGR03576 pyridox_MJ0158 pyrid 100.0 5.8E-26 1.3E-30 211.4 29.0 294 48-403 33-345 (346)
127 TIGR03392 FeS_syn_CsdA cystein 100.0 9.8E-26 2.1E-30 215.9 31.1 331 32-406 16-396 (398)
128 PRK05958 8-amino-7-oxononanoat 100.0 2.9E-26 6.2E-31 219.0 26.6 327 29-403 37-385 (385)
129 PF12897 Aminotran_MocR: Alani 100.0 8.8E-26 1.9E-30 200.9 27.5 315 66-404 59-414 (425)
130 PRK10874 cysteine sulfinate de 100.0 1.1E-25 2.5E-30 215.7 30.2 292 77-406 65-399 (401)
131 PLN02483 serine palmitoyltrans 100.0 7.8E-26 1.7E-30 219.7 29.0 332 29-406 98-467 (489)
132 KOG0633 Histidinol phosphate a 100.0 7.4E-27 1.6E-31 195.6 18.7 277 94-403 82-375 (375)
133 PRK05093 argD bifunctional N-s 100.0 3.4E-26 7.5E-31 218.9 25.2 333 27-406 36-401 (403)
134 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 1.6E-25 3.5E-30 211.8 28.4 285 77-406 53-369 (370)
135 cd06502 TA_like Low-specificit 99.9 1.5E-25 3.2E-30 210.2 27.2 291 70-401 27-337 (338)
136 PRK04073 rocD ornithine--oxo-a 99.9 1.7E-25 3.8E-30 213.6 27.7 331 27-403 36-395 (396)
137 cd06454 KBL_like KBL_like; thi 99.9 1.6E-25 3.5E-30 210.9 26.9 323 32-402 2-348 (349)
138 TIGR00713 hemL glutamate-1-sem 99.9 1.1E-25 2.4E-30 216.9 26.2 341 27-406 44-423 (423)
139 PRK02936 argD acetylornithine 99.9 3.5E-25 7.5E-30 210.6 28.2 337 27-403 25-377 (377)
140 PRK12381 bifunctional succinyl 99.9 2.3E-25 4.9E-30 213.1 25.7 341 27-406 35-400 (406)
141 TIGR01979 sufS cysteine desulf 99.9 1.5E-24 3.3E-29 208.2 31.4 330 30-407 16-403 (403)
142 PRK09295 bifunctional cysteine 99.9 1.1E-24 2.3E-29 209.1 29.8 333 32-407 23-406 (406)
143 cd00610 OAT_like Acetyl ornith 99.9 3.9E-25 8.4E-30 213.1 25.7 341 28-403 33-413 (413)
144 TIGR01821 5aminolev_synth 5-am 99.9 2.6E-24 5.7E-29 206.1 29.9 329 30-407 44-398 (402)
145 PRK07179 hypothetical protein; 99.9 3.8E-24 8.3E-29 205.3 30.8 326 29-406 52-399 (407)
146 PLN02242 methionine gamma-lyas 99.9 2.3E-24 5.1E-29 205.1 28.4 279 73-406 74-416 (418)
147 PRK00854 rocD ornithine--oxo-a 99.9 2.7E-24 5.9E-29 206.1 27.2 332 28-404 38-400 (401)
148 PRK09064 5-aminolevulinate syn 99.9 6.9E-24 1.5E-28 203.7 29.6 329 30-407 45-399 (407)
149 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 6.2E-24 1.4E-28 200.7 28.8 283 76-403 45-360 (361)
150 PRK07049 methionine gamma-lyas 99.9 1.3E-23 2.8E-28 200.8 30.9 283 73-405 81-426 (427)
151 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 6.5E-24 1.4E-28 202.0 28.4 331 31-407 18-383 (387)
152 PRK13479 2-aminoethylphosphona 99.9 9.3E-24 2E-28 200.2 29.2 320 48-407 11-365 (368)
153 PRK08088 4-aminobutyrate amino 99.9 6.5E-24 1.4E-28 204.1 28.4 348 27-406 37-424 (425)
154 PRK02948 cysteine desulfurase; 99.9 2.3E-24 4.9E-29 205.3 23.9 287 77-406 45-375 (381)
155 PLN02409 serine--glyoxylate am 99.9 1.2E-23 2.6E-28 200.9 27.9 324 48-407 15-374 (401)
156 PLN02855 Bifunctional selenocy 99.9 2E-23 4.3E-28 201.4 29.4 332 31-405 31-418 (424)
157 PRK13393 5-aminolevulinate syn 99.9 3.7E-23 8E-28 198.3 31.0 330 30-407 44-398 (406)
158 COG4992 ArgD Ornithine/acetylo 99.9 8.7E-24 1.9E-28 191.3 24.9 349 19-405 30-398 (404)
159 TIGR03403 nifS_epsilon cystein 99.9 9.3E-24 2E-28 201.1 25.8 296 75-406 39-376 (382)
160 cd00378 SHMT Serine-glycine hy 99.9 6.7E-24 1.5E-28 203.6 24.8 330 31-405 19-385 (402)
161 cd06451 AGAT_like Alanine-glyo 99.9 3E-23 6.6E-28 195.9 28.8 289 77-404 34-356 (356)
162 PRK04260 acetylornithine amino 99.9 2.6E-23 5.5E-28 197.4 28.1 333 27-403 25-375 (375)
163 TIGR03246 arg_catab_astC succi 99.9 1.4E-23 3E-28 200.2 25.8 334 27-406 31-396 (397)
164 TIGR02326 transamin_PhnW 2-ami 99.9 4.6E-23 1E-27 195.0 29.2 317 48-404 9-361 (363)
165 PTZ00125 ornithine aminotransf 99.9 3E-23 6.5E-28 198.9 27.2 342 28-406 28-396 (400)
166 TIGR01976 am_tr_V_VC1184 cyste 99.9 5.1E-23 1.1E-27 197.2 28.6 328 33-399 18-397 (397)
167 cd00613 GDC-P Glycine cleavage 99.9 2E-23 4.4E-28 200.1 25.3 322 31-399 20-398 (398)
168 PLN00144 acetylornithine trans 99.9 3.8E-23 8.3E-28 195.6 26.3 332 28-406 12-381 (382)
169 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 6.4E-23 1.4E-27 193.7 27.4 315 48-403 5-355 (355)
170 PRK13520 L-tyrosine decarboxyl 99.9 3.2E-22 6.9E-27 190.1 29.9 296 78-405 62-371 (371)
171 PRK08247 cystathionine gamma-s 99.9 3.2E-22 7E-27 188.5 29.4 274 73-406 50-365 (366)
172 PRK06234 methionine gamma-lyas 99.9 4.2E-22 9.1E-27 189.5 30.0 217 73-340 62-285 (400)
173 PLN03227 serine palmitoyltrans 99.9 1.4E-22 3E-27 192.4 26.3 331 34-406 1-383 (392)
174 cd06453 SufS_like Cysteine des 99.9 1.9E-22 4E-27 191.8 27.0 280 76-399 44-373 (373)
175 PRK04612 argD acetylornithine 99.9 2.2E-22 4.7E-27 191.4 27.0 342 27-405 36-403 (408)
176 PRK09792 4-aminobutyrate trans 99.9 4E-22 8.6E-27 190.9 28.8 340 27-404 36-420 (421)
177 PLN02624 ornithine-delta-amino 99.9 4.4E-22 9.4E-27 193.0 29.2 337 28-405 72-444 (474)
178 cd06450 DOPA_deC_like DOPA dec 99.9 3.9E-23 8.5E-28 194.3 20.7 302 48-401 9-344 (345)
179 PRK06777 4-aminobutyrate amino 99.9 4.6E-22 9.9E-27 190.5 27.8 344 27-404 36-420 (421)
180 COG1104 NifS Cysteine sulfinat 99.9 2.2E-22 4.9E-27 182.6 22.8 318 48-406 12-378 (386)
181 COG0520 csdA Selenocysteine ly 99.9 2.6E-21 5.7E-26 182.3 30.9 319 48-404 33-404 (405)
182 TIGR03402 FeS_nifS cysteine de 99.9 4.5E-22 9.8E-27 189.4 26.1 288 77-406 44-373 (379)
183 PRK06918 4-aminobutyrate amino 99.9 7.3E-22 1.6E-26 191.0 27.7 345 27-406 50-444 (451)
184 TIGR00700 GABAtrnsam 4-aminobu 99.9 1.6E-21 3.6E-26 187.1 29.0 340 27-404 29-419 (420)
185 TIGR01437 selA_rel uncharacter 99.9 9.6E-22 2.1E-26 184.9 26.7 316 31-403 8-363 (363)
186 TIGR01885 Orn_aminotrans ornit 99.9 1.4E-21 3E-26 187.1 28.0 334 28-403 34-400 (401)
187 PRK08360 4-aminobutyrate amino 99.9 7.1E-22 1.5E-26 189.7 26.0 344 27-406 37-427 (443)
188 PRK07504 O-succinylhomoserine 99.9 1.7E-21 3.7E-26 185.0 28.3 279 73-405 63-395 (398)
189 TIGR03812 tyr_de_CO2_Arch tyro 99.9 4.5E-22 9.7E-27 189.2 24.4 295 77-401 61-372 (373)
190 PRK06460 hypothetical protein; 99.9 2E-21 4.4E-26 183.3 27.9 277 74-406 44-375 (376)
191 PRK08249 cystathionine gamma-s 99.9 3.6E-21 7.7E-26 182.5 28.3 278 73-405 62-393 (398)
192 PRK08133 O-succinylhomoserine 99.9 5.1E-21 1.1E-25 181.5 28.4 276 74-404 60-389 (390)
193 COG0075 Serine-pyruvate aminot 99.9 4.9E-21 1.1E-25 175.3 26.6 319 48-407 11-365 (383)
194 PRK06767 methionine gamma-lyas 99.9 3.9E-21 8.4E-26 182.3 26.8 275 73-405 59-385 (386)
195 PRK08117 4-aminobutyrate amino 99.9 3.6E-21 7.8E-26 185.6 26.1 346 27-406 39-430 (433)
196 PRK00062 glutamate-1-semialdeh 99.9 2.7E-21 5.9E-26 185.7 25.2 331 28-406 47-425 (426)
197 TIGR01977 am_tr_V_EF2568 cyste 99.9 4.3E-21 9.2E-26 182.7 26.1 316 48-401 11-375 (376)
198 PRK08045 cystathionine gamma-s 99.9 1.6E-20 3.5E-25 177.4 29.6 278 73-405 50-382 (386)
199 TIGR01328 met_gam_lyase methio 99.9 1.4E-20 2.9E-25 178.5 29.2 280 74-406 58-391 (391)
200 TIGR02080 O_succ_thio_ly O-suc 99.9 1.1E-20 2.4E-25 178.4 28.2 278 73-405 49-381 (382)
201 PRK07495 4-aminobutyrate amino 99.9 4.6E-21 1E-25 183.3 26.0 344 27-406 36-422 (425)
202 PRK00451 glycine dehydrogenase 99.9 3E-21 6.4E-26 187.6 25.0 267 98-403 129-446 (447)
203 COG0156 BioF 7-keto-8-aminopel 99.9 8.6E-21 1.9E-25 175.4 26.4 325 30-402 38-387 (388)
204 PRK07505 hypothetical protein; 99.9 8.6E-21 1.9E-25 181.7 27.2 327 28-405 43-399 (402)
205 cd00614 CGS_like CGS_like: Cys 99.9 1.3E-20 2.8E-25 178.0 28.0 276 73-403 38-368 (369)
206 PRK07582 cystathionine gamma-l 99.9 6.6E-21 1.4E-25 179.3 25.7 275 73-406 49-366 (366)
207 PRK08776 cystathionine gamma-s 99.9 1.9E-20 4.1E-25 177.9 28.5 276 75-405 60-390 (405)
208 TIGR02006 IscS cysteine desulf 99.9 7.4E-21 1.6E-25 182.1 25.2 289 76-406 48-378 (402)
209 PRK07811 cystathionine gamma-s 99.9 2.1E-20 4.5E-25 177.2 27.8 277 73-404 59-387 (388)
210 PRK05964 adenosylmethionine--8 99.9 2.3E-20 4.9E-25 179.5 27.5 350 27-406 38-423 (423)
211 PRK06058 4-aminobutyrate amino 99.9 2.7E-20 5.9E-25 179.5 28.0 344 27-406 52-443 (443)
212 PRK07503 methionine gamma-lyas 99.9 3E-20 6.5E-25 176.8 27.5 216 74-340 64-284 (403)
213 PRK00011 glyA serine hydroxyme 99.9 3.3E-20 7.1E-25 178.8 27.9 326 30-405 24-389 (416)
214 PRK08861 cystathionine gamma-s 99.9 4.6E-20 1E-24 173.7 28.0 278 73-405 51-383 (388)
215 PRK08574 cystathionine gamma-s 99.9 7E-20 1.5E-24 173.1 29.3 276 74-405 52-384 (385)
216 PRK11658 UDP-4-amino-4-deoxy-L 99.9 3.2E-20 6.9E-25 175.9 26.6 303 50-403 13-377 (379)
217 TIGR01325 O_suc_HS_sulf O-succ 99.9 4.6E-20 9.9E-25 174.6 27.5 216 73-340 52-271 (380)
218 PLN02955 8-amino-7-oxononanoat 99.9 6.7E-20 1.4E-24 173.4 28.3 324 30-406 101-462 (476)
219 TIGR02407 ectoine_ectB diamino 99.9 2.3E-20 5E-25 178.3 25.5 348 27-405 31-412 (412)
220 PRK07050 cystathionine beta-ly 99.9 1.1E-19 2.3E-24 172.4 29.4 278 73-405 63-391 (394)
221 PRK05937 8-amino-7-oxononanoat 99.9 4.8E-20 1E-24 174.5 26.7 327 30-407 3-352 (370)
222 TIGR00709 dat 2,4-diaminobutyr 99.9 7.4E-20 1.6E-24 176.3 27.5 347 27-405 35-435 (442)
223 PRK09264 diaminobutyrate--2-ox 99.9 7.1E-20 1.5E-24 175.8 27.2 349 27-405 35-416 (425)
224 PRK07810 O-succinylhomoserine 99.9 1.1E-19 2.4E-24 172.7 27.9 216 73-340 68-288 (403)
225 PRK14012 cysteine desulfurase; 99.9 9.7E-20 2.1E-24 174.6 27.1 289 76-406 50-380 (404)
226 COG0160 GabT 4-aminobutyrate a 99.9 8.5E-20 1.8E-24 170.5 25.6 347 27-406 52-446 (447)
227 PRK05939 hypothetical protein; 99.9 7.2E-19 1.6E-23 166.6 31.2 277 77-405 49-396 (397)
228 PRK08248 O-acetylhomoserine am 99.9 4.6E-19 1E-23 169.4 29.8 157 74-266 63-223 (431)
229 PRK09028 cystathionine beta-ly 99.9 6.4E-19 1.4E-23 165.8 30.2 281 69-405 53-387 (394)
230 PRK07269 cystathionine gamma-s 99.9 2.3E-19 5E-24 168.2 27.1 277 73-404 52-363 (364)
231 PRK03715 argD acetylornithine 99.9 2.7E-19 5.9E-24 169.9 27.4 339 28-406 33-394 (395)
232 TIGR01329 cysta_beta_ly_E cyst 99.9 4E-19 8.7E-24 167.8 27.2 283 69-407 39-377 (378)
233 PRK08593 4-aminobutyrate amino 99.9 4.4E-19 9.6E-24 170.7 27.9 346 27-406 38-430 (445)
234 TIGR02379 ECA_wecE TDP-4-keto- 99.9 3.5E-19 7.6E-24 168.0 26.3 159 99-282 47-207 (376)
235 PLN02509 cystathionine beta-ly 99.9 8.2E-19 1.8E-23 167.9 28.9 283 69-405 125-461 (464)
236 PRK07671 cystathionine beta-ly 99.9 6E-19 1.3E-23 166.4 27.5 275 74-404 49-377 (377)
237 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 4.7E-19 1E-23 169.6 27.1 160 73-270 55-218 (418)
238 TIGR03235 DNA_S_dndA cysteine 99.8 9E-20 2E-24 171.9 21.0 262 77-379 44-321 (353)
239 PRK08064 cystathionine beta-ly 99.8 1.2E-18 2.7E-23 165.2 28.2 274 76-405 55-382 (390)
240 PRK06084 O-acetylhomoserine am 99.8 1.7E-18 3.6E-23 165.5 29.1 156 74-265 57-216 (425)
241 PRK06702 O-acetylhomoserine am 99.8 1.2E-18 2.5E-23 165.4 26.7 280 75-404 61-423 (432)
242 PRK05968 hypothetical protein; 99.8 2E-18 4.4E-23 163.7 28.0 213 75-340 63-280 (389)
243 PRK06541 hypothetical protein; 99.8 1.7E-18 3.7E-23 167.1 27.6 346 27-406 48-456 (460)
244 PRK11522 putrescine--2-oxoglut 99.8 1.6E-18 3.5E-23 166.9 27.2 346 27-406 78-452 (459)
245 PRK04366 glycine dehydrogenase 99.8 1.1E-18 2.4E-23 169.9 25.8 324 48-405 81-448 (481)
246 TIGR03372 putres_am_tran putre 99.8 1.6E-18 3.6E-23 165.6 26.6 337 27-403 71-442 (442)
247 TIGR01324 cysta_beta_ly_B cyst 99.8 5.8E-18 1.3E-22 159.3 29.8 281 69-405 42-376 (377)
248 PRK05967 cystathionine beta-ly 99.8 5.1E-18 1.1E-22 159.4 28.8 260 99-406 80-392 (395)
249 PRK15407 lipopolysaccharide bi 99.8 3E-18 6.5E-23 164.4 27.9 209 36-281 28-245 (438)
250 COG0399 WecE Predicted pyridox 99.8 2.4E-18 5.2E-23 158.0 25.7 286 76-405 35-373 (374)
251 PRK06176 cystathionine gamma-s 99.8 2.7E-18 5.8E-23 162.1 26.5 276 76-407 51-380 (380)
252 TIGR03588 PseC UDP-4-keto-6-de 99.8 2E-18 4.3E-23 164.2 25.4 309 50-403 9-380 (380)
253 PLN02482 glutamate-1-semialdeh 99.8 2.5E-18 5.4E-23 165.6 26.2 336 28-406 96-474 (474)
254 cd00616 AHBA_syn 3-amino-5-hyd 99.8 1.5E-18 3.3E-23 163.7 24.1 281 73-400 16-352 (352)
255 PRK06062 hypothetical protein; 99.8 3.8E-18 8.3E-23 164.4 27.2 347 27-406 49-446 (451)
256 cd00615 Orn_deC_like Ornithine 99.8 2E-19 4.4E-24 164.7 17.2 231 73-337 57-293 (294)
257 PF00266 Aminotran_5: Aminotra 99.8 7.2E-18 1.6E-22 160.0 28.0 310 48-395 10-371 (371)
258 PLN02651 cysteine desulfurase 99.8 1.8E-18 3.9E-23 163.6 23.6 259 77-377 45-320 (364)
259 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 4.8E-18 1E-22 161.0 26.0 155 99-280 47-204 (375)
260 PRK05769 4-aminobutyrate amino 99.8 6.8E-18 1.5E-22 162.4 26.8 344 27-406 50-440 (441)
261 COG2008 GLY1 Threonine aldolas 99.8 1.3E-17 2.8E-22 148.5 25.3 314 48-403 10-341 (342)
262 PRK07986 adenosylmethionine--8 99.8 6E-18 1.3E-22 161.6 24.9 349 27-405 39-423 (428)
263 PRK06173 adenosylmethionine--8 99.8 1.7E-17 3.7E-22 158.7 27.9 348 27-405 40-425 (429)
264 COG0001 HemL Glutamate-1-semia 99.8 5.5E-18 1.2E-22 155.5 23.3 336 29-406 51-429 (432)
265 PRK07482 hypothetical protein; 99.8 1.6E-17 3.5E-22 160.5 27.4 344 27-405 46-454 (461)
266 PRK12389 glutamate-1-semialdeh 99.8 2.3E-17 5.1E-22 158.4 28.3 340 27-406 49-428 (428)
267 TIGR03531 selenium_SpcS O-phos 99.8 9.1E-18 2E-22 159.0 24.7 217 99-339 124-344 (444)
268 PLN02760 4-aminobutyrate:pyruv 99.8 3.4E-17 7.4E-22 159.2 28.7 351 27-406 85-492 (504)
269 PRK06943 adenosylmethionine--8 99.8 2.4E-17 5.3E-22 158.8 27.4 351 27-406 50-447 (453)
270 PRK05630 adenosylmethionine--8 99.8 2.7E-17 5.8E-22 157.2 27.3 347 27-406 36-421 (422)
271 PRK05965 hypothetical protein; 99.8 3.4E-17 7.3E-22 158.2 28.1 350 27-406 42-448 (459)
272 PRK06082 4-aminobutyrate amino 99.8 2.6E-17 5.7E-22 158.8 27.1 344 28-406 69-452 (459)
273 PRK05639 4-aminobutyrate amino 99.8 2.6E-17 5.6E-22 158.6 26.7 345 27-406 49-444 (457)
274 PRK07678 aminotransferase; Val 99.8 3.1E-17 6.8E-22 158.2 26.6 348 27-407 43-451 (451)
275 PRK13360 omega amino acid--pyr 99.8 3.2E-17 6.9E-22 157.6 26.6 350 27-406 42-441 (442)
276 KOG1368 Threonine aldolase [Am 99.8 3.1E-17 6.8E-22 140.7 23.2 324 31-401 21-364 (384)
277 PRK07030 adenosylmethionine--8 99.8 6.7E-17 1.5E-21 156.1 27.9 349 27-406 43-447 (466)
278 PRK09221 beta alanine--pyruvat 99.8 8.7E-17 1.9E-21 154.7 28.6 349 27-406 45-444 (445)
279 PRK06916 adenosylmethionine--8 99.8 7E-17 1.5E-21 156.0 27.9 351 27-406 52-456 (460)
280 PRK04013 argD acetylornithine/ 99.8 2E-17 4.4E-22 154.5 23.1 320 27-405 20-360 (364)
281 PRK06105 aminotransferase; Pro 99.8 5.7E-17 1.2E-21 156.7 26.7 350 27-406 44-450 (460)
282 PRK05994 O-acetylhomoserine am 99.8 1.1E-16 2.4E-21 153.3 28.5 155 76-266 64-222 (427)
283 PRK00615 glutamate-1-semialdeh 99.8 3.2E-17 7E-22 156.7 24.2 339 27-406 49-429 (433)
284 PRK06917 hypothetical protein; 99.8 5.8E-17 1.2E-21 156.1 26.1 350 27-406 27-438 (447)
285 TIGR00508 bioA adenosylmethion 99.8 8.4E-17 1.8E-21 154.3 27.0 345 28-405 42-426 (427)
286 PRK07036 hypothetical protein; 99.8 1.7E-16 3.7E-21 153.5 29.2 349 27-405 47-452 (466)
287 PRK06938 diaminobutyrate--2-ox 99.8 1.2E-16 2.6E-21 154.3 27.7 346 27-405 59-460 (464)
288 COG0161 BioA Adenosylmethionin 99.8 7.8E-17 1.7E-21 149.8 25.0 350 27-405 40-443 (449)
289 PRK08742 adenosylmethionine--8 99.8 2.1E-16 4.5E-21 152.7 28.9 353 27-406 60-468 (472)
290 PRK07481 hypothetical protein; 99.8 1.4E-16 3.1E-21 153.6 27.7 347 27-406 38-446 (449)
291 PRK08134 O-acetylhomoserine am 99.8 1.6E-16 3.5E-21 151.9 27.6 155 76-266 65-223 (433)
292 TIGR02618 tyr_phenol_ly tyrosi 99.8 1.8E-16 3.9E-21 148.2 25.9 302 70-405 66-426 (450)
293 PRK13034 serine hydroxymethylt 99.8 1.7E-16 3.6E-21 152.0 26.5 341 14-405 12-392 (416)
294 PRK07812 O-acetylhomoserine am 99.8 2.8E-16 6.1E-21 150.1 27.6 285 71-405 63-431 (436)
295 PRK07480 putative aminotransfe 99.8 1.3E-16 2.7E-21 154.0 25.1 350 27-406 46-449 (456)
296 PRK12403 putative aminotransfe 99.8 1.9E-16 4E-21 153.1 26.1 350 27-406 50-453 (460)
297 TIGR01814 kynureninase kynuren 99.8 2.6E-16 5.7E-21 151.0 26.2 276 97-403 85-405 (406)
298 PRK06931 diaminobutyrate--2-ox 99.8 1.5E-16 3.3E-21 153.6 24.5 346 27-405 54-454 (459)
299 PRK07046 aminotransferase; Val 99.8 2.2E-16 4.7E-21 152.1 25.5 334 28-406 72-451 (453)
300 PRK13580 serine hydroxymethylt 99.8 7.6E-17 1.6E-21 152.9 21.7 288 77-405 96-445 (493)
301 PF01041 DegT_DnrJ_EryC1: DegT 99.8 9.6E-17 2.1E-21 151.4 22.2 259 75-379 25-309 (363)
302 PRK07483 hypothetical protein; 99.8 3.1E-16 6.8E-21 150.8 25.6 346 27-406 26-438 (443)
303 PRK08114 cystathionine beta-ly 99.8 7.3E-16 1.6E-20 144.7 26.8 282 70-406 55-394 (395)
304 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 6.6E-16 1.4E-20 144.7 26.2 280 68-404 46-386 (386)
305 COG0626 MetC Cystathionine bet 99.7 3.6E-15 7.7E-20 138.0 28.9 278 74-406 62-395 (396)
306 PRK05613 O-acetylhomoserine am 99.7 2.6E-15 5.5E-20 143.6 28.1 280 76-405 70-436 (437)
307 PRK06148 hypothetical protein; 99.7 8.9E-16 1.9E-20 161.0 26.4 345 27-406 620-1011(1013)
308 PRK06149 hypothetical protein; 99.7 1.2E-15 2.6E-20 160.0 26.9 343 28-405 582-970 (972)
309 COG0112 GlyA Glycine/serine hy 99.7 1.7E-15 3.6E-20 135.9 22.8 287 77-405 73-390 (413)
310 PRK13237 tyrosine phenol-lyase 99.7 5.8E-15 1.3E-19 138.5 26.7 305 70-405 73-433 (460)
311 KOG1549 Cysteine desulfurase N 99.7 1.4E-15 3E-20 139.1 21.7 205 28-266 39-254 (428)
312 KOG1401 Acetylornithine aminot 99.7 1.5E-14 3.2E-19 130.0 27.4 344 28-406 53-431 (433)
313 PRK02769 histidine decarboxyla 99.7 5.6E-15 1.2E-19 138.9 25.9 291 79-404 69-371 (380)
314 PRK08297 L-lysine aminotransfe 99.7 7.8E-15 1.7E-19 141.2 27.2 344 29-406 43-442 (443)
315 PRK06209 glutamate-1-semialdeh 99.7 3.1E-15 6.7E-20 143.8 23.7 328 27-405 44-405 (431)
316 KOG1404 Alanine-glyoxylate ami 99.7 2.5E-15 5.3E-20 134.0 20.5 344 21-399 40-432 (442)
317 KOG2862 Alanine-glyoxylate ami 99.7 2.2E-14 4.7E-19 124.2 25.1 321 48-405 23-382 (385)
318 TIGR01788 Glu-decarb-GAD gluta 99.7 8.1E-15 1.7E-19 139.8 24.8 287 100-406 101-430 (431)
319 KOG0053 Cystathionine beta-lya 99.7 2.4E-14 5.3E-19 130.8 26.3 277 76-406 78-407 (409)
320 cd01494 AAT_I Aspartate aminot 99.7 9.2E-16 2E-20 128.7 15.2 165 77-265 2-167 (170)
321 PTZ00094 serine hydroxymethylt 99.7 5.5E-15 1.2E-19 143.3 22.3 330 31-404 34-407 (452)
322 PRK06434 cystathionine gamma-l 99.7 4.3E-14 9.4E-19 132.9 26.8 272 75-404 64-383 (384)
323 PLN02271 serine hydroxymethylt 99.7 5E-14 1.1E-18 134.4 27.0 270 104-404 218-539 (586)
324 KOG1359 Glycine C-acetyltransf 99.7 1.4E-14 3E-19 124.3 20.5 326 30-406 66-413 (417)
325 TIGR00699 GABAtrns_euk 4-amino 99.7 2.4E-14 5.2E-19 137.4 24.6 344 27-403 54-464 (464)
326 PF04864 Alliinase_C: Allinase 99.7 5.1E-16 1.1E-20 137.2 11.9 283 77-402 45-362 (363)
327 PLN03032 serine decarboxylase; 99.7 2.7E-14 5.9E-19 133.3 23.1 288 77-401 68-372 (374)
328 TIGR01364 serC_1 phosphoserine 99.7 3.8E-14 8.2E-19 132.4 23.6 309 49-405 3-348 (349)
329 COG1103 Archaea-specific pyrid 99.7 4.9E-14 1.1E-18 119.7 21.6 290 77-406 63-381 (382)
330 PRK04311 selenocysteine syntha 99.6 1.5E-13 3.2E-18 132.0 27.2 339 30-404 78-463 (464)
331 TIGR03251 LAT_fam L-lysine 6-t 99.6 7.8E-14 1.7E-18 134.2 24.9 339 29-401 36-430 (431)
332 PLN02414 glycine dehydrogenase 99.6 1.4E-13 2.9E-18 141.5 27.1 297 67-405 553-907 (993)
333 PF00464 SHMT: Serine hydroxym 99.6 9.5E-15 2.1E-19 135.7 17.0 286 77-398 67-398 (399)
334 PLN02724 Molybdenum cofactor s 99.6 1E-13 2.2E-18 142.9 26.3 335 40-403 36-486 (805)
335 cd00611 PSAT_like Phosphoserin 99.6 2.9E-14 6.3E-19 134.1 20.1 278 77-402 46-353 (355)
336 PRK05355 3-phosphoserine/phosp 99.6 3.8E-14 8.3E-19 133.0 19.7 286 76-407 49-360 (360)
337 PLN02263 serine decarboxylase 99.6 4E-13 8.6E-18 127.5 25.5 318 54-404 107-442 (470)
338 KOG1360 5-aminolevulinate synt 99.6 2.4E-13 5.2E-18 121.4 22.4 291 77-407 218-526 (570)
339 PLN03226 serine hydroxymethylt 99.6 5E-13 1.1E-17 129.3 26.6 270 104-404 104-418 (475)
340 PF01212 Beta_elim_lyase: Beta 99.6 1.5E-14 3.4E-19 130.5 15.1 235 70-340 24-271 (290)
341 PLN02974 adenosylmethionine-8- 99.6 5.6E-13 1.2E-17 135.4 27.7 347 32-403 366-816 (817)
342 PLN02880 tyrosine decarboxylas 99.6 9.2E-13 2E-17 128.1 27.4 330 48-406 93-485 (490)
343 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 1E-14 2.2E-19 136.1 13.3 233 74-336 64-314 (417)
344 COG2873 MET17 O-acetylhomoseri 99.6 8.8E-13 1.9E-17 117.4 24.1 156 75-266 62-221 (426)
345 PLN02590 probable tyrosine dec 99.6 1.7E-12 3.6E-17 126.4 28.4 337 48-406 141-533 (539)
346 TIGR01366 serC_3 phosphoserine 99.6 1.8E-13 3.8E-18 128.8 21.0 309 48-406 9-361 (361)
347 PRK15029 arginine decarboxylas 99.6 1.5E-13 3.3E-18 137.4 21.5 190 74-285 203-418 (755)
348 PRK03080 phosphoserine aminotr 99.6 9.3E-14 2E-18 131.8 18.0 280 76-406 49-374 (378)
349 PF00202 Aminotran_3: Aminotra 99.6 5E-14 1.1E-18 131.3 14.3 278 28-339 13-316 (339)
350 TIGR00474 selA seryl-tRNA(sec) 99.6 2.6E-12 5.7E-17 123.0 25.9 211 31-270 74-301 (454)
351 PRK13578 ornithine decarboxyla 99.5 1.2E-12 2.7E-17 129.7 21.7 169 74-264 172-364 (720)
352 COG0076 GadB Glutamate decarbo 99.5 2.9E-12 6.3E-17 122.6 22.9 286 48-358 72-378 (460)
353 PRK15400 lysine decarboxylase 99.5 1.3E-12 2.9E-17 129.3 21.0 169 74-263 193-375 (714)
354 TIGR01365 serC_2 phosphoserine 99.5 1.7E-12 3.7E-17 121.3 19.0 282 77-404 41-372 (374)
355 PRK15399 lysine decarboxylase 99.5 9.4E-12 2E-16 123.4 23.3 169 75-265 194-377 (713)
356 KOG1402 Ornithine aminotransfe 99.5 8.1E-12 1.8E-16 109.2 18.1 330 29-404 57-426 (427)
357 TIGR03799 NOD_PanD_pyr putativ 99.4 1.3E-10 2.9E-15 113.3 26.2 261 71-357 121-435 (522)
358 PF06838 Met_gamma_lyase: Meth 99.4 2E-10 4.4E-15 102.8 24.7 237 99-369 70-327 (403)
359 TIGR02617 tnaA_trp_ase tryptop 99.4 5.8E-11 1.2E-15 110.5 22.0 331 29-405 39-441 (467)
360 PRK05367 glycine dehydrogenase 99.4 9.3E-11 2E-15 121.4 23.2 276 99-405 558-875 (954)
361 TIGR00461 gcvP glycine dehydro 99.4 6.5E-10 1.4E-14 113.4 27.1 295 68-405 516-867 (939)
362 PLN02452 phosphoserine transam 99.4 1.2E-10 2.7E-15 108.8 20.4 322 31-405 6-363 (365)
363 KOG1357 Serine palmitoyltransf 99.3 1.7E-11 3.6E-16 111.6 12.9 287 76-403 183-500 (519)
364 PF00282 Pyridoxal_deC: Pyrido 99.3 2.7E-10 5.8E-15 107.2 21.2 285 48-356 50-369 (373)
365 PRK12566 glycine dehydrogenase 99.3 1.4E-09 2.9E-14 110.5 26.2 302 68-405 529-876 (954)
366 COG1982 LdcC Arginine/lysine/o 99.3 9.1E-10 2E-14 105.2 23.3 291 76-404 71-403 (557)
367 PLN02414 glycine dehydrogenase 99.3 9.4E-10 2E-14 113.6 22.7 277 77-401 150-465 (993)
368 PRK12462 phosphoserine aminotr 99.2 1.2E-09 2.6E-14 101.3 19.4 320 33-405 5-362 (364)
369 KOG1403 Predicted alanine-glyo 99.2 5.7E-10 1.2E-14 96.6 15.5 341 27-404 43-436 (452)
370 PRK05367 glycine dehydrogenase 99.2 8.3E-09 1.8E-13 107.1 25.0 277 77-400 123-437 (954)
371 COG3033 TnaA Tryptophanase [Am 99.1 4.3E-08 9.4E-13 87.3 22.1 310 68-405 72-444 (471)
372 COG3844 Kynureninase [Amino ac 99.1 7.1E-08 1.5E-12 84.9 23.1 343 14-406 15-403 (407)
373 KOG1383 Glutamate decarboxylas 99.0 7.8E-08 1.7E-12 88.6 20.6 303 76-406 117-447 (491)
374 COG4100 Cystathionine beta-lya 99.0 4.2E-08 9.1E-13 85.3 17.4 166 76-265 66-246 (416)
375 COG1003 GcvP Glycine cleavage 99.0 3.6E-07 7.8E-12 83.7 23.4 141 67-220 94-243 (496)
376 KOG2467 Glycine/serine hydroxy 98.9 1.3E-07 2.8E-12 84.4 18.5 271 104-404 110-425 (477)
377 TIGR03811 tyr_de_CO2_Ent tyros 98.9 2.3E-06 4.9E-11 84.8 29.1 276 48-339 94-475 (608)
378 COG1921 SelA Selenocysteine sy 98.9 5.9E-07 1.3E-11 82.5 22.6 216 31-278 20-243 (395)
379 KOG1358 Serine palmitoyltransf 98.9 2.6E-08 5.7E-13 89.6 13.4 329 29-405 92-465 (467)
380 PF05889 SLA_LP_auto_ag: Solub 98.8 5.6E-07 1.2E-11 82.6 19.1 285 99-404 75-389 (389)
381 PLN02994 1-aminocyclopropane-1 98.8 8.1E-09 1.8E-13 83.8 5.7 66 69-138 86-153 (153)
382 TIGR00461 gcvP glycine dehydro 98.6 2.1E-05 4.5E-10 81.1 24.2 273 77-400 111-426 (939)
383 KOG0629 Glutamate decarboxylas 98.5 7E-06 1.5E-10 75.1 16.7 220 100-341 161-415 (510)
384 PF03841 SelA: L-seryl-tRNA se 98.5 2.5E-07 5.3E-12 84.3 6.3 160 99-278 63-233 (367)
385 COG1932 SerC Phosphoserine ami 98.5 9.8E-06 2.1E-10 73.2 15.9 322 31-406 4-364 (365)
386 PF02347 GDC-P: Glycine cleava 98.5 1.4E-05 3.1E-10 75.3 17.7 218 77-339 112-364 (429)
387 COG0403 GcvP Glycine cleavage 98.4 0.00051 1.1E-08 63.5 26.2 294 64-401 100-446 (450)
388 KOG0628 Aromatic-L-amino-acid/ 98.3 4.5E-05 9.8E-10 70.7 17.4 93 129-226 185-280 (511)
389 KOG1405 4-aminobutyrate aminot 98.3 2.4E-05 5.2E-10 70.0 13.3 215 165-405 255-483 (484)
390 PRK12566 glycine dehydrogenase 98.0 0.002 4.4E-08 66.6 21.9 283 64-399 104-438 (954)
391 KOG2040 Glycine dehydrogenase 97.7 0.01 2.3E-07 57.8 20.6 143 67-220 567-719 (1001)
392 KOG3843 Predicted serine hydro 97.2 0.014 3E-07 50.6 13.8 197 127-340 104-301 (432)
393 PLN02672 methionine S-methyltr 96.3 0.091 2E-06 55.9 14.3 200 52-275 405-620 (1082)
394 KOG2790 Phosphoserine aminotra 96.2 0.19 4E-06 44.4 13.4 322 30-406 5-369 (370)
395 KOG3846 L-kynurenine hydrolase 95.7 0.67 1.5E-05 41.5 14.6 132 76-221 112-254 (465)
396 KOG2040 Glycine dehydrogenase 89.1 27 0.00058 35.2 22.5 296 58-400 137-478 (1001)
397 cd06568 GH20_SpHex_like A subg 84.7 2.3 4.9E-05 39.6 5.9 71 139-216 23-93 (329)
398 COG0296 GlgB 1,4-alpha-glucan 82.3 1.9 4.1E-05 43.3 4.5 34 194-227 210-243 (628)
399 cd02742 GH20_hexosaminidase Be 82.3 4 8.6E-05 37.5 6.4 68 140-215 22-89 (303)
400 cd06562 GH20_HexA_HexB-like Be 79.8 4.3 9.3E-05 38.1 5.8 65 140-216 24-88 (348)
401 KOG1465 Translation initiation 79.1 25 0.00054 31.7 9.8 108 96-220 160-273 (353)
402 cd06570 GH20_chitobiase-like_1 75.8 6.1 0.00013 36.4 5.5 63 140-216 24-86 (311)
403 COG1105 FruK Fructose-1-phosph 75.6 44 0.00096 30.6 10.7 55 162-220 110-168 (310)
404 KOG1209 1-Acyl dihydroxyaceton 74.3 27 0.0006 30.0 8.3 87 98-191 7-93 (289)
405 cd06563 GH20_chitobiase-like T 72.8 9.7 0.00021 35.9 6.2 77 140-216 24-104 (357)
406 cd06569 GH20_Sm-chitobiase-lik 71.4 12 0.00026 36.4 6.6 77 139-215 27-114 (445)
407 COG2102 Predicted ATPases of P 70.4 56 0.0012 28.3 9.5 99 101-215 4-116 (223)
408 PF00728 Glyco_hydro_20: Glyco 65.7 6.1 0.00013 37.1 3.3 68 140-216 24-91 (351)
409 PF14258 DUF4350: Domain of un 64.5 37 0.00081 23.1 6.3 60 139-217 10-70 (70)
410 COG0552 FtsY Signal recognitio 64.3 46 0.001 30.8 8.3 109 100-219 140-268 (340)
411 PLN03244 alpha-amylase; Provis 64.2 11 0.00025 38.9 4.9 42 185-226 428-469 (872)
412 smart00642 Aamy Alpha-amylase 62.5 10 0.00022 31.3 3.6 27 197-223 69-95 (166)
413 PRK04296 thymidine kinase; Pro 61.7 97 0.0021 26.1 11.0 112 123-251 27-142 (190)
414 TIGR02104 pulA_typeI pullulana 59.8 10 0.00022 38.7 3.8 35 187-224 221-255 (605)
415 PF05687 DUF822: Plant protein 59.7 45 0.00097 26.5 6.3 51 318-380 12-66 (150)
416 TIGR01470 cysG_Nterm siroheme 58.0 1.2E+02 0.0026 26.0 10.1 94 98-219 9-103 (205)
417 PF02662 FlpD: Methyl-viologen 58.0 58 0.0013 25.4 7.0 58 148-211 29-90 (124)
418 TIGR02402 trehalose_TreZ malto 57.8 17 0.00037 36.5 4.9 32 194-225 156-187 (542)
419 PHA02128 hypothetical protein 57.7 51 0.0011 24.5 6.0 93 106-215 56-148 (151)
420 PRK05678 succinyl-CoA syntheta 57.1 51 0.0011 30.1 7.4 71 134-219 52-124 (291)
421 PF04019 DUF359: Protein of un 57.0 91 0.002 24.2 8.3 77 188-284 40-117 (121)
422 KOG2741 Dimeric dihydrodiol de 56.7 50 0.0011 30.6 7.2 77 134-224 59-135 (351)
423 KOG2865 NADH:ubiquinone oxidor 56.2 1.3E+02 0.0028 27.4 9.3 102 99-212 61-169 (391)
424 PF05368 NmrA: NmrA-like famil 55.7 80 0.0017 27.3 8.5 63 140-216 37-99 (233)
425 PRK12313 glycogen branching en 51.8 24 0.00052 36.2 5.0 33 193-225 215-247 (633)
426 COG0031 CysK Cysteine synthase 51.7 83 0.0018 28.8 7.8 56 96-155 59-116 (300)
427 TIGR01515 branching_enzym alph 50.5 25 0.00054 36.0 4.8 33 193-225 201-233 (613)
428 PF10087 DUF2325: Uncharacteri 50.5 98 0.0021 22.7 8.0 70 135-216 11-80 (97)
429 TIGR01019 sucCoAalpha succinyl 49.9 76 0.0016 28.9 7.3 71 134-219 50-122 (286)
430 PF00128 Alpha-amylase: Alpha 49.7 13 0.00029 33.7 2.6 30 197-226 51-80 (316)
431 PLN02960 alpha-amylase 49.7 26 0.00056 36.9 4.7 37 190-226 458-494 (897)
432 PRK05703 flhF flagellar biosyn 49.2 2.6E+02 0.0056 27.2 11.4 129 79-220 201-342 (424)
433 PRK05402 glycogen branching en 48.8 28 0.0006 36.4 4.9 35 191-225 308-342 (726)
434 TIGR00064 ftsY signal recognit 48.7 2E+02 0.0044 25.8 11.0 113 100-219 73-201 (272)
435 PLN02447 1,4-alpha-glucan-bran 47.9 27 0.00058 36.4 4.5 33 193-225 295-327 (758)
436 PRK05234 mgsA methylglyoxal sy 47.0 1E+02 0.0023 24.6 7.0 82 126-219 32-114 (142)
437 TIGR02012 tigrfam_recA protein 46.7 1.7E+02 0.0037 27.1 9.2 21 365-385 270-290 (321)
438 PRK08535 translation initiatio 46.5 2.4E+02 0.0052 26.0 11.2 105 97-218 119-229 (310)
439 PRK09441 cytoplasmic alpha-amy 46.5 22 0.00048 35.0 3.7 28 197-224 80-107 (479)
440 TIGR03573 WbuX N-acetyl sugar 46.5 2.5E+02 0.0055 26.3 11.9 104 99-223 61-172 (343)
441 PRK13352 thiamine biosynthesis 45.2 1.6E+02 0.0034 28.2 8.6 160 31-224 60-232 (431)
442 PRK01160 hypothetical protein; 44.7 1.7E+02 0.0037 24.5 7.9 78 188-285 90-171 (178)
443 PRK11889 flhF flagellar biosyn 44.5 3E+02 0.0064 26.6 10.4 106 101-219 243-361 (436)
444 PRK14706 glycogen branching en 44.5 34 0.00073 35.1 4.7 33 193-225 212-244 (639)
445 COG1184 GCD2 Translation initi 44.5 2.5E+02 0.0055 25.7 11.2 105 96-217 117-227 (301)
446 TIGR03815 CpaE_hom_Actino heli 44.1 2.6E+02 0.0057 25.7 10.5 134 75-219 73-213 (322)
447 PF04016 DUF364: Domain of unk 43.7 44 0.00096 26.9 4.4 78 123-211 8-89 (147)
448 TIGR00623 sula cell division i 43.6 1.9E+02 0.0041 23.9 11.0 81 125-213 59-140 (168)
449 PRK14705 glycogen branching en 43.3 34 0.00074 37.7 4.7 36 190-225 807-842 (1224)
450 PF01408 GFO_IDH_MocA: Oxidore 42.5 1.3E+02 0.0028 22.6 6.9 69 135-216 50-118 (120)
451 PF01008 IF-2B: Initiation fac 42.0 1.3E+02 0.0027 27.2 7.6 120 79-218 92-217 (282)
452 KOG1201 Hydroxysteroid 17-beta 41.7 2.8E+02 0.006 25.4 10.8 101 99-206 38-144 (300)
453 cd06564 GH20_DspB_LnbB-like Gl 41.3 29 0.00063 32.2 3.4 74 140-215 23-99 (326)
454 COG2870 RfaE ADP-heptose synth 41.1 71 0.0015 30.4 5.7 82 129-218 94-178 (467)
455 COG0505 CarA Carbamoylphosphat 40.6 1.4E+02 0.0031 27.8 7.5 70 126-209 179-249 (368)
456 TIGR00190 thiC thiamine biosyn 40.2 2.2E+02 0.0048 27.1 8.8 157 31-224 60-229 (423)
457 COG1909 Uncharacterized protei 40.2 2.1E+02 0.0045 23.5 7.5 77 188-284 85-162 (167)
458 PRK02261 methylaspartate mutas 40.2 1.9E+02 0.0041 23.0 9.4 58 141-211 25-82 (137)
459 PLN02565 cysteine synthase 40.1 2.2E+02 0.0047 26.4 9.0 51 101-154 70-120 (322)
460 PRK09354 recA recombinase A; P 39.9 2.4E+02 0.0052 26.5 9.1 121 99-221 60-198 (349)
461 PRK10595 SOS cell division inh 39.9 2.1E+02 0.0046 23.5 11.2 81 125-213 55-136 (164)
462 COG2515 Acd 1-aminocyclopropan 39.8 3E+02 0.0065 25.2 11.1 109 99-210 64-178 (323)
463 PF12138 Spherulin4: Spherulat 39.8 1.6E+02 0.0035 26.2 7.7 57 163-220 16-78 (253)
464 cd02071 MM_CoA_mut_B12_BD meth 39.4 1.8E+02 0.0038 22.4 7.2 57 142-211 22-78 (122)
465 TIGR01425 SRP54_euk signal rec 39.4 3.7E+02 0.008 26.1 10.9 115 100-219 101-223 (429)
466 TIGR00289 conserved hypothetic 39.2 2.2E+02 0.0047 24.8 8.2 96 106-215 7-115 (222)
467 PF00154 RecA: recA bacterial 38.4 1.8E+02 0.0038 27.0 7.9 85 99-184 53-138 (322)
468 KOG2774 NAD dependent epimeras 38.4 2.4E+02 0.0051 24.8 8.0 75 139-227 93-167 (366)
469 cd02072 Glm_B12_BD B12 binding 38.1 1.5E+02 0.0033 23.2 6.4 59 141-212 21-79 (128)
470 PF02310 B12-binding: B12 bind 37.9 1.1E+02 0.0024 23.1 5.9 66 141-219 22-89 (121)
471 cd02067 B12-binding B12 bindin 37.4 1.8E+02 0.0039 22.0 7.6 58 141-211 21-78 (119)
472 PLN00191 enolase 37.3 2.7E+02 0.0059 27.3 9.4 100 108-218 296-395 (457)
473 COG2102 Predicted ATPases of P 37.3 2.1E+02 0.0045 24.9 7.6 70 140-215 105-177 (223)
474 PRK14723 flhF flagellar biosyn 37.1 4.8E+02 0.01 27.6 11.5 112 99-220 185-305 (767)
475 cd06449 ACCD Aminocyclopropane 36.8 2.5E+02 0.0054 25.7 8.8 17 139-155 100-116 (307)
476 TIGR01501 MthylAspMutase methy 36.6 1.5E+02 0.0034 23.4 6.3 60 140-212 22-81 (134)
477 PRK07476 eutB threonine dehydr 36.2 3.5E+02 0.0076 25.0 10.0 51 101-154 70-120 (322)
478 cd01422 MGS Methylglyoxal synt 36.1 1.7E+02 0.0037 22.3 6.4 70 139-216 36-106 (115)
479 PRK12568 glycogen branching en 36.1 50 0.0011 34.3 4.4 33 194-226 315-347 (730)
480 PLN00125 Succinyl-CoA ligase [ 36.1 1.2E+02 0.0026 27.8 6.4 74 132-219 54-129 (300)
481 TIGR00290 MJ0570_dom MJ0570-re 36.0 2.8E+02 0.0061 24.2 8.4 96 106-215 7-115 (223)
482 PRK10785 maltodextrin glucosid 36.0 44 0.00095 34.0 4.0 64 162-225 175-253 (598)
483 PF03460 NIR_SIR_ferr: Nitrite 35.9 16 0.00034 24.9 0.6 23 188-211 15-37 (69)
484 PLN00011 cysteine synthase 35.9 2.6E+02 0.0057 25.8 8.9 53 99-154 70-122 (323)
485 PF04002 RadC: RadC-like JAB d 35.9 1.2E+02 0.0025 23.6 5.5 59 162-224 50-118 (123)
486 TIGR00649 MG423 conserved hypo 35.8 4.1E+02 0.0089 25.6 12.2 74 125-212 318-401 (422)
487 PLN00196 alpha-amylase; Provis 35.8 44 0.00095 32.4 3.8 29 196-224 90-118 (428)
488 cd06448 L-Ser-dehyd Serine deh 35.0 3.3E+02 0.0071 25.1 9.3 114 99-226 52-167 (316)
489 PF05127 Helicase_RecD: Helica 34.7 39 0.00084 28.2 2.8 104 123-254 22-126 (177)
490 TIGR00511 ribulose_e2b2 ribose 34.2 3.7E+02 0.008 24.6 11.4 104 97-217 114-223 (301)
491 cd07476 Peptidases_S8_thiazoli 34.2 1.4E+02 0.003 26.8 6.6 69 148-216 75-143 (267)
492 PLN03013 cysteine synthase 33.6 2.8E+02 0.0061 26.9 8.8 51 101-154 178-228 (429)
493 PRK08638 threonine dehydratase 33.6 1.8E+02 0.004 27.0 7.5 53 99-154 76-128 (333)
494 COG1908 FrhD Coenzyme F420-red 33.4 2E+02 0.0044 22.2 6.1 58 148-211 30-91 (132)
495 COG3033 TnaA Tryptophanase [Am 33.3 4.3E+02 0.0092 25.1 13.3 57 96-155 42-100 (471)
496 COG1204 Superfamily II helicas 33.2 2.2E+02 0.0048 30.1 8.5 55 99-154 48-110 (766)
497 TIGR02102 pullulan_Gpos pullul 32.7 55 0.0012 35.8 4.2 28 197-224 554-581 (1111)
498 PF04016 DUF364: Domain of unk 32.6 78 0.0017 25.5 4.2 69 99-175 63-131 (147)
499 PLN02970 serine racemase 32.4 1.7E+02 0.0037 27.2 7.0 54 99-155 76-129 (328)
500 PF13460 NAD_binding_10: NADH( 32.3 2.4E+02 0.0052 23.0 7.4 88 106-212 3-90 (183)
No 1
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.3e-60 Score=416.20 Aligned_cols=395 Identities=53% Similarity=0.935 Sum_probs=376.8
Q ss_pred ccccccCCCCCchhhhhHhhhhcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHH
Q 015435 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSA 85 (407)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a 85 (407)
||.++...|+++|+++...+++++++++|||++|++.|+.|.++..+.|+++...+. +......|.|..|++.++++++
T Consensus 1 ~F~~i~~~p~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~-~~~~~k~Yl~i~G~~~f~~~~~ 79 (396)
T COG1448 1 MFEKIEAAPADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLL-EQEKTKNYLPIEGLPEFLEAVQ 79 (396)
T ss_pred CccccccCCCCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhh-ccccccccCCcCCcHHHHHHHH
Confidence 578999999999999999999999999999999999999998888899999998887 4457888999999999999999
Q ss_pred HHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcCh
Q 015435 86 KLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNF 165 (407)
Q Consensus 86 ~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~ 165 (407)
+++++..+..++.+++..+||.|||+|+.+...++....+..+|.+++|+|++|..+++.+|.++..||++|..+.++|+
T Consensus 80 ~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df 159 (396)
T COG1448 80 KLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDF 159 (396)
T ss_pred HHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccH
Confidence 99999887777889999999999999999999999888888899999999999999999999999999999999899999
Q ss_pred hhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcE
Q 015435 166 QGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245 (407)
Q Consensus 166 ~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (407)
+.+.+.+.+.+...+++++.+||||||.-++.++|++|+++.++++++.++|-||++|..+ .+.|.+.++.+.......
T Consensus 160 ~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G-leeDa~~lR~~a~~~~~~ 238 (396)
T COG1448 160 DGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG-LEEDAYALRLFAEVGPEL 238 (396)
T ss_pred HHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc-hHHHHHHHHHHHHhCCcE
Confidence 9999999988899999999999999999999999999999999999999999999999987 888999999998888889
Q ss_pred EEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHH
Q 015435 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRI 325 (407)
Q Consensus 246 i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 325 (407)
++..||||+||+-|.|+|.+.+++.|.+...++.+.+....+..+++||..+..++..+|++++++.+|...+..+++++
T Consensus 239 lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri 318 (396)
T COG1448 239 LVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRI 318 (396)
T ss_pred EEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCCHHHHHHhHhhccEEEcCCCeEEecCCCCCChhHHHHHHHHH
Q 015435 326 ISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAA 402 (407)
Q Consensus 326 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~ggRis~~~~~~e~i~~~~~~l~~~ 402 (407)
.++|..|.+.|+..+.+..|+++..+.|+|.+.+++.+++.++.++++|++..+|||+++++++..++.++++|.++
T Consensus 319 ~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gls~~QV~rLree~~IY~v~sGRi~vaGl~~~ni~~va~ai~~v 395 (396)
T COG1448 319 LEMRQALVDALKALGAPRNFDFIISQRGMFSYTGLSPEQVDRLREEFGIYLVASGRINVAGLNTSNIDYVAKAIAAV 395 (396)
T ss_pred HHHHHHHHHHHHhhCCCcccchHhhcCceeecCCCCHHHHHHHHHhccEEEecCCeeeeccCChhhHHHHHHHHHhh
Confidence 99999999999998877789999999999999999999999999999999999999999999999999999999876
No 2
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.2e-55 Score=416.74 Aligned_cols=399 Identities=58% Similarity=0.997 Sum_probs=319.5
Q ss_pred ccccccCCCCCchhhhhHhhhhcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHH
Q 015435 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSA 85 (407)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a 85 (407)
+|.|+...+.++++...+.+++..+++.+||+.|.|.+..+.+.+.+.+.++...+. ......+|++..|.+++|++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~~Y~~~~G~~~lR~aia 82 (404)
T PTZ00376 4 LFSQVPLGPPDPILGLAAAFKADPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIA-EKNLDKEYLPIEGLQSFIEAAQ 82 (404)
T ss_pred hhhcCCcCCCChHHHHHHHHhhcCCcccEecccceeECCCCCEehhhHHHHHHHHhc-cccCCCCCCCCCCCHHHHHHHH
Confidence 688888888888888777776555578999999987443442334455555544443 2344578999999999999999
Q ss_pred HHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHH-HhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcC
Q 015435 86 KLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFL-ARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLN 164 (407)
Q Consensus 86 ~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~-~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 164 (407)
+++.+..+..+++++|++.+|.|+++++.++..++ ..+.+||+|++++|+|+.|...++..|++++.+|+.+++++++|
T Consensus 83 ~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d 162 (404)
T PTZ00376 83 KLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLD 162 (404)
T ss_pred HHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcC
Confidence 99966655556788998333999999999986544 34579999999999999999999999999999999544568999
Q ss_pred hhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCc
Q 015435 165 FQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGE 244 (407)
Q Consensus 165 ~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~ 244 (407)
++.+++.+.+......++++++||||||.+++.+++++|+++|++||++||+||+|.++.+++.+.+..++..+....++
T Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~ 242 (404)
T PTZ00376 163 FDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVE 242 (404)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCc
Confidence 99999998643233455666999999999999999999999999999999999999999985321123344444444568
Q ss_pred EEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHH
Q 015435 245 CLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADR 324 (407)
Q Consensus 245 ~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (407)
+++++||||.|+++|+|+||+.+++.++++.+++...+....+..+.+++.++|.++..++++..+.+.|.+.+++.+++
T Consensus 243 vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 322 (404)
T PTZ00376 243 FLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGR 322 (404)
T ss_pred EEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999843356777777777666655544455678889999999998876556666777888899
Q ss_pred HHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCCHHHHHHhHhhccEEEcCCCeEEecCCCCCChhHHHHHHHHHHH
Q 015435 325 IISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 325 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~ggRis~~~~~~e~i~~~~~~l~~~l~ 404 (407)
++++++.+.+.|++.+.+..+.+..|+||+|.|++++.+++.++++++||.+.|+|||+++.+++++++.++++|++++.
T Consensus 323 ~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~~~~~~~L~~~~~v~v~p~~Ris~~~~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 323 IQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGLTKEQVERLIEKYHIYLLDNGRISVAGLTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred HHHHHHHHHHHHHhcCCCCcccccccCceEEEecCCCHHHHHHHHHhCCEeecCCCeEEEeccCHHhHHHHHHHHHHHHh
Confidence 99999999999998764323566688999999999999999999998999999999999986799999999999999875
Q ss_pred h
Q 015435 405 R 405 (407)
Q Consensus 405 ~ 405 (407)
.
T Consensus 403 ~ 403 (404)
T PTZ00376 403 N 403 (404)
T ss_pred c
Confidence 3
No 3
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=1.5e-54 Score=413.92 Aligned_cols=393 Identities=49% Similarity=0.866 Sum_probs=317.8
Q ss_pred ccccccCCCCCchhhhhHhhhhcCCCCeeeeeeeeeecCCCcccc-chhHHHHHHHHhccccccccCCCCCCcHHHHHHH
Q 015435 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLV-LNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLS 84 (407)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~ 84 (407)
||+|+...+++++..+...++....++.|||++|.+.++++ ..| .+.+.++..++. ......+|++..|.+++|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~-~~p~~~~l~~a~~~~~-~~~~~~~Y~~~~G~~~lR~ai 78 (396)
T PRK09257 1 MFEHLEAAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQG-RTPVLRAVKKAEARLL-ETETTKNYLPIEGLAAYRQAV 78 (396)
T ss_pred CcccCCCCCCChHHHHHHHHhhCCCcCcEecceeeEECCCC-CEeccHHHHHHHHHhc-ccccCCCcCCCCCCHHHHHHH
Confidence 47888888888888877777654457899999999866555 334 345555555554 223456799999999999999
Q ss_pred HHHHhCCCCCCCCCCce--EEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCC
Q 015435 85 AKLILGADSPAIKDNRV--TTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRG 162 (407)
Q Consensus 85 a~~~~~~~~~~~~~~~i--~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ 162 (407)
++++.+.++..+++++| ++ |+|+++++.++.+++..+.+||+|++++|+|+.|...++..|++++.+|+.++++++
T Consensus 79 a~~~~~~~~~~~~~~~i~v~i--T~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~ 156 (396)
T PRK09257 79 QELLFGADSPALAAGRVATVQ--TPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKG 156 (396)
T ss_pred HHHhcCCCCcccccCeEEEEe--cCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCc
Confidence 99997665544567887 78 999999999996656556899999999999999999999999999999985455679
Q ss_pred cChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcC
Q 015435 163 LNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADG 242 (407)
Q Consensus 163 ~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~ 242 (407)
+|++++++.+.+.+....++++++||||||.++|.+++++|+++|++||+++|+||+|.++.++. +.+..++..+....
T Consensus 157 ~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~-~~~~~~~~~~~~~~ 235 (396)
T PRK09257 157 LDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGL-EEDAYGLRAFAAAG 235 (396)
T ss_pred cCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccch-HHHHHHHHHHHhcC
Confidence 99999999887433445667769999999999999999999999999999999999999998641 11234444444445
Q ss_pred CcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHH
Q 015435 243 GECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMA 322 (407)
Q Consensus 243 ~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 322 (407)
+++++++||||.|+++|+|+||++.++++++...++...+....+..+.+++.+.|.++..++.+..+.+.|.+++++.+
T Consensus 236 ~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r 315 (396)
T PRK09257 236 LELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMR 315 (396)
T ss_pred CcEEEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 68999999999999999999999422456665556666665555555557788999999999998776666778899999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCCHHHHHHhHhhccEEEcCCCeEEecCCCCCChhHHHHHHHHH
Q 015435 323 DRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAA 402 (407)
Q Consensus 323 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~ggRis~~~~~~e~i~~~~~~l~~~ 402 (407)
++++++++.+.+.|++.+.+..+.+..|+||+|.|++++.+++.++++++||.+.|.|||+++.++++++++++++|+++
T Consensus 316 ~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~~~~~~~l~~~~~V~~~p~~ri~~~~~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 316 ERIKAMRQLLVEALKAKGPSRDFDFIARQRGMFSYSGLTPEQVDRLREEFGVYAVGSGRINVAGLNESNIDYVAEAIAAV 395 (396)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcccccccceEEEecCCCHHHHHHHHHcCCEEEcCCCeEEEeeCCHHHHHHHHHHHHhh
Confidence 99999999999999987532226677899999999999988889999999999999899999877999999999999876
Q ss_pred H
Q 015435 403 V 403 (407)
Q Consensus 403 l 403 (407)
+
T Consensus 396 ~ 396 (396)
T PRK09257 396 L 396 (396)
T ss_pred C
Confidence 4
No 4
>PLN02397 aspartate transaminase
Probab=100.00 E-value=7.7e-54 Score=410.54 Aligned_cols=399 Identities=78% Similarity=1.203 Sum_probs=318.2
Q ss_pred cccccccCCCCCchhhhhHhhhhcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHH
Q 015435 5 SVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLS 84 (407)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~ 84 (407)
+||.++...+.++|....+.++.+.....|+|+.|.+.++.+.|...+.+.++...+. +.....+|++..|.++||+++
T Consensus 22 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~-~~~~~~~Y~~~~G~~~LR~ai 100 (423)
T PLN02397 22 SRFEHVEPAPPDPILGVTEAFLADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLL-AGSRNKEYLPIEGLAEFNKLS 100 (423)
T ss_pred hHHHcCCcCCCChHHHHHHHHhhCCCcceEecccceeeCCCCCcccchHHHHHHHHhh-ccCCCCCCCCcCCCHHHHHHH
Confidence 4789999999999999888887777788999999975455553443455666655553 234456799999999999999
Q ss_pred HHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcC
Q 015435 85 AKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLN 164 (407)
Q Consensus 85 a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 164 (407)
++++.+......++++|...++.+++++..++..++..+.+||+|++++|+|+.|...++.+|++++.+|+.+++++++|
T Consensus 101 a~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d 180 (423)
T PLN02397 101 AKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLD 180 (423)
T ss_pred HHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccC
Confidence 99996654433334455333355666676655555666679999999999999999999999999999998544457899
Q ss_pred hhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCc
Q 015435 165 FQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGE 244 (407)
Q Consensus 165 ~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~ 244 (407)
++.+++.+.+.+.+..++++++||||||.+++.+++++|+++|++||++||+||+|.++.+++...+..++..+....++
T Consensus 181 ~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~ 260 (423)
T PLN02397 181 FDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHE 260 (423)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCc
Confidence 99999888643233455665999999999999999999999999999999999999999985421123344444444467
Q ss_pred EEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHH
Q 015435 245 CLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADR 324 (407)
Q Consensus 245 ~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (407)
+|+++||||.|+++|||+||+++++++++..+.+...+....+..+.+++.+.|.++..++++..+.+.|.+++++++++
T Consensus 261 vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~ 340 (423)
T PLN02397 261 ILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADR 340 (423)
T ss_pred EEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999843356677666666666666655566788889999999998876666776778899999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCCHHHHHHhHhhccEEEcCCCeEEecCCCCCChhHHHHHHHHHHH
Q 015435 325 IISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 325 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~ggRis~~~~~~e~i~~~~~~l~~~l~ 404 (407)
++++++.+.+.|++.+.+..+.+..|+||||.|++++.+++.++++++||.+.++|||+++.++++.+++++++|+++++
T Consensus 341 ~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~fl~~~l~~~~~~~Ll~~~~V~v~~~~Ri~~~~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 341 IISMRQKLYDALEARGSPGDWSHITKQIGMFSFTGLNKEQVDRMTKEYHIYMTRDGRISMAGLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCcccCCceEEEecCCCHHHHHHHHHhCCEEECCCCeEEEeeCCHHHHHHHHHHHHHHHh
Confidence 99999999999998864334677789999999999998899999999999999999999987799999999999999986
No 5
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.1e-54 Score=404.29 Aligned_cols=346 Identities=18% Similarity=0.251 Sum_probs=294.6
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCc-eEEeecCCc
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNR-VTTVQCLSG 109 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~-i~~~~t~g~ 109 (407)
.++|||++|.| +. +.|.+..+++.+++. .... .|++..|+++||+++++++...++..+++++ |++ |+|+
T Consensus 28 ~~vi~l~iG~P---d~-~~p~~i~~a~~~a~~--~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiiv--t~Ga 98 (393)
T COG0436 28 EDVIDLSIGEP---DF-PTPEHIIEAAIEALE--EGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIV--TAGA 98 (393)
T ss_pred CCEEEeCCCCC---CC-CCCHHHHHHHHHHHh--cccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEE--eCCH
Confidence 68999999996 55 888899999988886 2222 6889999999999999999777776677665 999 9999
Q ss_pred ccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecC-CCCCcChhhHHHHHHcCCCCcEEEEecCCC
Q 015435 110 TGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDP-ATRGLNFQGLLEDLRAAPSGAIVLLHACAH 188 (407)
Q Consensus 110 t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~ 188 (407)
++++.++ ++..+.+||+|++++|.|+.|...+..+|++++.+++..+ .++.+|++++++.++ ++++++++ ++||
T Consensus 99 ~~al~~~--~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~--~ktk~i~l-n~P~ 173 (393)
T COG0436 99 KEALFLA--FLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAIT--PKTKAIIL-NSPN 173 (393)
T ss_pred HHHHHHH--HHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcC--ccceEEEE-eCCC
Confidence 9999999 4666899999999999999999999999999999998534 479999999999998 67888777 9999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEe
Q 015435 189 NPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIV 268 (407)
Q Consensus 189 NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v 268 (407)
||||.+++++++++|+++|++||++||+||+|.++.+++. ..+++..+....+++|++.||||.|+++|||+||+ +
T Consensus 174 NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~--~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~--v 249 (393)
T COG0436 174 NPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGA--EHPSILELAGARDRTITINSFSKTYGMTGWRIGWV--V 249 (393)
T ss_pred CCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCC--CcCCHhhcCCCcceEEEEecccccccccccceeEe--e
Confidence 9999999999999999999999999999999999999863 24445444444578999999999999999999999 5
Q ss_pred ecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc
Q 015435 269 CKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHI 348 (407)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 348 (407)
+++++ +.+.+...+....++++.+.|.++..+|++.+. ....+..++.++++|+.+.+.|++.+. +.+.
T Consensus 250 ~~~~~----l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~----~~~~~~~~~~~~~rrd~l~~~l~~~~g---~~~~ 318 (393)
T COG0436 250 GPPEE----LIAALRKLKSYLTSCAPTPAQYAAIAALNGPQS----DEVVEEMREEYRERRDLLVEALNEIGG---LSVV 318 (393)
T ss_pred cChHH----HHHHHHHHHHhcccCCCHHHHHHHHHHhcCccc----hHHHHHHHHHHHHHHHHHHHHHHhcCC---eeec
Confidence 66554 444454566667779999999999999998741 145677779999999999999998864 7777
Q ss_pred c-CCceeEEecCCC-----HHHHHHhHhhccEEEcCC-------C----eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 349 I-KQIGMFTFTGLN-----SEQVAFMTKEYHIYMTSD-------G----RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 349 ~-~~~~~~~~~~~~-----~~~~~~~l~~~gi~~~~g-------g----Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
. |.|++|.|++++ .+++.++|+++||.+.|| | |||++. +++.+++++++|.+.++..
T Consensus 319 ~~p~Ga~Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~-~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 319 KPPEGAFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLAT-SEETLEEALRRLARFLAEY 392 (393)
T ss_pred cCCCeeEEEEeecCCCCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEec-CHHHHHHHHHHHHHHHHhc
Confidence 7 889999999663 467899999999999996 2 999997 6699999999999988754
No 6
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-52 Score=362.08 Aligned_cols=400 Identities=70% Similarity=1.122 Sum_probs=382.0
Q ss_pred cccccccCCCCCchhhhhHhhhhcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHH
Q 015435 5 SVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLS 84 (407)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~ 84 (407)
+.+.++...|++||+++..+++.++++..|||++|.+.|.+|+|...+.++++..++. .......|.|..|++++.+..
T Consensus 26 s~~s~V~maPpDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~-~~~ldKEYlpI~Gl~eF~k~s 104 (427)
T KOG1411|consen 26 SWWSHVEMAPPDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLA-SLSLDKEYLPITGLAEFNKLS 104 (427)
T ss_pred chhhcCCCCCCCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHh-hhcccchhccccchHHHHHHH
Confidence 4688999999999999999999999999999999999999999999999999999887 345566899999999999999
Q ss_pred HHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcC
Q 015435 85 AKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLN 164 (407)
Q Consensus 85 a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 164 (407)
+++.++..+..+++++|+.+||-|||+|+.+...++..+-++..|.+|+|+|.++..++..+|..+..+..+++.+.++|
T Consensus 105 akLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld 184 (427)
T KOG1411|consen 105 AKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLD 184 (427)
T ss_pred HHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccccc
Confidence 99999999888999999999999999999999999998889999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCc
Q 015435 165 FQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGE 244 (407)
Q Consensus 165 ~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~ 244 (407)
++.+.+.+.+.+....++++.+.|||||+-.+.+.|++|.++.++.+.+-++|.+|++|..++.+.++++++.|...+.+
T Consensus 185 ~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~ 264 (427)
T KOG1411|consen 185 FKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHE 264 (427)
T ss_pred hHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCc
Confidence 99999999988889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHH
Q 015435 245 CLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADR 324 (407)
Q Consensus 245 ~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (407)
++++-||.|.+|+.|.|+|.+.+||.+++...++.+.+....++++++||..+..++...+.+.+++.+|...++.+.++
T Consensus 265 ~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadR 344 (427)
T KOG1411|consen 265 ILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADR 344 (427)
T ss_pred eEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCCHHHHHHhHhhccEEEcCCCeEEecCCCCCChhHHHHHHHHHHH
Q 015435 325 IISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 325 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~ggRis~~~~~~e~i~~~~~~l~~~l~ 404 (407)
+..+|+.|.+.|+..+.+..|+++..+.|+|.|.+++.+++..+.+++.|.++..||||+++++...+..+.++|.++-+
T Consensus 345 i~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl~peQv~~l~ke~~iYmT~dGRiS~aG~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 345 IISMRQQLFDALEKEGSPGNWSHITKQIGMFCFTGLNPEQVDWLTKEYHIYLTKDGRISMAGLSSSNVPYLADAIHAVTK 424 (427)
T ss_pred hhhhHHHHhHHhhcCCCCccHHHHHHhhheeeecCCCHHHHHHHHhhheeeeccCceEeeccccccCCcccchhhHhHhc
Confidence 99999999999999988778999999999999999999999999999999999999999999999999999999988754
Q ss_pred h
Q 015435 405 R 405 (407)
Q Consensus 405 ~ 405 (407)
.
T Consensus 425 ~ 425 (427)
T KOG1411|consen 425 N 425 (427)
T ss_pred C
Confidence 3
No 7
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-51 Score=349.00 Aligned_cols=403 Identities=51% Similarity=0.875 Sum_probs=380.8
Q ss_pred ccccccccCCCCCchhhhhHhhhhcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHH
Q 015435 4 ESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKL 83 (407)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ 83 (407)
+++|..+...++..++.....|.++..+..+||++|.+.+.+|.|+..+++++....+.++....|.|-|..|++.++.+
T Consensus 3 ~s~f~~I~~a~p~~vf~~~~~y~~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~ 82 (410)
T KOG1412|consen 3 MSFFANIPVAPPIEVFKLNASYGEDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKA 82 (410)
T ss_pred cchhcCCccCChHHHHhhHHHhcccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhh
Confidence 36999999999999999999999999999999999999999999999999999988887666778999999999999999
Q ss_pred HHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcC-ceeeEEEeecCCCCC
Q 015435 84 SAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAG-LSVKTYRYYDPATRG 162 (407)
Q Consensus 84 ~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G-~~~~~v~~~~~~~~~ 162 (407)
.++.+++.+...+++++++-+|+-|||+|+.+...++..+-...+|.+++|+|.++..+++.+| ..+..++.-+.++..
T Consensus 83 A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~ 162 (410)
T KOG1412|consen 83 ATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKC 162 (410)
T ss_pred hHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCce
Confidence 9999999999999999999999999999999999999887777889999999999999999999 567778876777789
Q ss_pred cChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcC
Q 015435 163 LNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADG 242 (407)
Q Consensus 163 ~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~ 242 (407)
+|++.+...++..|...+++++.+.|||||.-.+.++|.+|++..++++++.++|-+|++|..++.+.|.|.++.+...+
T Consensus 163 ~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g 242 (410)
T KOG1412|consen 163 VDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQG 242 (410)
T ss_pred ecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcC
Confidence 99999999999888888888877779999999999999999999999999999999999999999999999999999988
Q ss_pred CcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHH
Q 015435 243 GECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMA 322 (407)
Q Consensus 243 ~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 322 (407)
...+++-||+|.+|+.+.|+|-+.++..++.....+.+.+...++..+++||..+..++.+.|..++++++|...++.+.
T Consensus 243 ~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~Ms 322 (410)
T KOG1412|consen 243 FELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMS 322 (410)
T ss_pred CeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 88999999999999999999999989999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCCHHHHHHhHhhccEEEcCCCeEEecCCCCCChhHHHHHHHHH
Q 015435 323 DRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAA 402 (407)
Q Consensus 323 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~ggRis~~~~~~e~i~~~~~~l~~~ 402 (407)
.|+.++|..|++.|..++.|+.|+++..+.|+|++.|++...++.+.+++.|++.+.|||++++++...++....+|.+.
T Consensus 323 sRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGLtp~qV~~li~~h~vyLl~~GRInisGLN~~NveyVAkAIde~ 402 (410)
T KOG1412|consen 323 SRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYTGLTPAQVDHLIENHKVYLLSDGRINISGLNMKNVEYVAKAIDET 402 (410)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeecCCCHHHHHHHHHhceEEEecCCcEeeeccccccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHhh
Q 015435 403 VTRM 406 (407)
Q Consensus 403 l~~~ 406 (407)
.+..
T Consensus 403 Vr~~ 406 (410)
T KOG1412|consen 403 VRAI 406 (410)
T ss_pred HHhh
Confidence 8754
No 8
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=4.3e-48 Score=370.01 Aligned_cols=361 Identities=16% Similarity=0.155 Sum_probs=286.1
Q ss_pred ccccccCCCCCchhhhhHhhhhcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHH
Q 015435 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSA 85 (407)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a 85 (407)
+..|+...+.+.+..+.... ...+.|||+.|.| +. +.++.+.+++.+.+. . ...+|++..|.++||++++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~---~~~~~i~l~~G~P---~~-~~~~~~~~~~~~~~~--~-~~~~Y~~~~G~~~Lr~aia 101 (413)
T PLN00175 32 VAKRLEKFKTTIFTQMSSLA---IKHGAINLGQGFP---NF-DGPDFVKEAAIQAIR--D-GKNQYARGFGVPELNSAIA 101 (413)
T ss_pred hhHHhhcCCCCHHHHHHHHh---hcCCeEecCCCCC---CC-CCCHHHHHHHHHHHh--c-CCCCcCCCCCCHHHHHHHH
Confidence 34555555555544433332 2358999999997 33 445455555555554 2 3467999999999999999
Q ss_pred HHHhCCCCCCCCCC-ceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcC
Q 015435 86 KLILGADSPAIKDN-RVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLN 164 (407)
Q Consensus 86 ~~~~~~~~~~~~~~-~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 164 (407)
+++....+..++++ +|++ |+|+++++.+++ ...+.+||+|++++|+|..+...++..|.+++.+++. ++++.+|
T Consensus 102 ~~~~~~~g~~~~~~~~I~v--t~G~~~al~~~~--~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~-~~~~~~~ 176 (413)
T PLN00175 102 ERFKKDTGLVVDPEKEVTV--TSGCTEAIAATI--LGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLR-PPDFAVP 176 (413)
T ss_pred HHHHHHhCCCCCCCCCEEE--eCCHHHHHHHHH--HHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECC-cccCCCC
Confidence 99965556666776 7999 999999999884 4457899999999999999999999999999999994 4457899
Q ss_pred hhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCc
Q 015435 165 FQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGE 244 (407)
Q Consensus 165 ~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~ 244 (407)
++++++.+. ++++++++ ++||||||.+++.+++++|+++|++|+++||+||+|.++.+++. ..++..+....++
T Consensus 177 ~~~l~~~~~--~~~k~i~i-~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~---~~s~~~~~~~~~~ 250 (413)
T PLN00175 177 EDELKAAFT--SKTRAILI-NTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGD---HISMASLPGMYER 250 (413)
T ss_pred HHHHHHhcC--cCceEEEe-cCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCc---ccChhhCCCCcCc
Confidence 999999887 56777766 89999999999999999999999999999999999999988642 2233333333578
Q ss_pred EEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHH
Q 015435 245 CLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADR 324 (407)
Q Consensus 245 ~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (407)
+|+++||||.|+++|+|+||+ +++ +.+...+.........+++.+.|.++..+|++.+ .++++.+++
T Consensus 251 vi~i~SfSK~~~~~G~RiG~~--v~~-----~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~------~~~~~~~~~ 317 (413)
T PLN00175 251 TVTMNSLGKTFSLTGWKIGWA--IAP-----PHLTWGVRQAHSFLTFATATPMQWAAVAALRAPE------SYYEELKRD 317 (413)
T ss_pred EEEEecchhhccCcchheeee--EeC-----HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCH------HHHHHHHHH
Confidence 999999999999999999999 566 4455555555554556888999999999997653 567888999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCC------C-HHHHHHhHhhccEEEcCC---------C----eEEe
Q 015435 325 IISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL------N-SEQVAFMTKEYHIYMTSD---------G----RISM 384 (407)
Q Consensus 325 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~l~~~gi~~~~g---------g----Ris~ 384 (407)
++++++++.+.|++.+ +.+..|.|++|+|+++ + .+++..+++++||.+.|| + ||++
T Consensus 318 ~~~~~~~l~~~L~~~g----~~~~~p~g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~ 393 (413)
T PLN00175 318 YSAKKDILVEGLKEVG----FKVYPSSGTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAF 393 (413)
T ss_pred HHHHHHHHHHHHHHCC----CeecCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEE
Confidence 9999999999999886 6778899999999854 2 245667778899999885 1 9999
Q ss_pred cCCCCCChhHHHHHHHHHHHh
Q 015435 385 AGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 385 ~~~~~e~i~~~~~~l~~~l~~ 405 (407)
+. +++++++++++|++++++
T Consensus 394 ~~-~~e~l~~~~~rL~~~~~~ 413 (413)
T PLN00175 394 CK-DEETLRAAVERMKTKLKR 413 (413)
T ss_pred cC-CHHHHHHHHHHHHHHHhC
Confidence 96 889999999999998864
No 9
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-48 Score=346.88 Aligned_cols=338 Identities=17% Similarity=0.159 Sum_probs=276.4
Q ss_pred eeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCC-CCceEEeecCCcccHHH
Q 015435 36 LGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIK-DNRVTTVQCLSGTGSLR 114 (407)
Q Consensus 36 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~-~~~i~~~~t~g~t~a~~ 114 (407)
|+.|.+ +. |.|..+.+++...+. ....++|++..|+++|++++++.+..-++.... +++|++ |.|+.+++.
T Consensus 36 LgqGfp---~~-~~P~fv~ea~~~~~~--~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlV--T~GA~~ai~ 107 (420)
T KOG0257|consen 36 LGQGFP---DF-PPPKFVTEAAKNAAK--EPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLV--TAGANEAIS 107 (420)
T ss_pred ccCCCC---CC-CCcHHHHHHHHHHhc--cchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEE--ecCchHHHH
Confidence 999986 55 767777777766665 336789999999999999999999553444443 467999 999999999
Q ss_pred HHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEee------cCCCCCcChhhHHHHHHcCCCCcEEEEecCCC
Q 015435 115 VGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYY------DPATRGLNFQGLLEDLRAAPSGAIVLLHACAH 188 (407)
Q Consensus 115 ~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~------~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~ 188 (407)
.+ ++..+++||+|++.+|.|++|...+..+|..++.+++. ...++.+|+++++.+++ +++++|++ |+||
T Consensus 108 ~~--~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t--~kTk~Ii~-ntPh 182 (420)
T KOG0257|consen 108 SA--LLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKIT--EKTKAIIL-NTPH 182 (420)
T ss_pred HH--HHHHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhcc--CCccEEEE-eCCC
Confidence 77 46779999999999999999999999999999999986 35568899999999999 77888888 9999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEe
Q 015435 189 NPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIV 268 (407)
Q Consensus 189 NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v 268 (407)
||||.++++++|++|+++|++||+++|.||+|..+.+++. ++..+..++++.++++.++|+||+||++|||+||+ +
T Consensus 183 NPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~--~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~--i 258 (420)
T KOG0257|consen 183 NPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGN--KHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWA--I 258 (420)
T ss_pred CCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCC--cceeeecCCchhheEEEeccccceeeeeeeeeeee--e
Confidence 9999999999999999999999999999999999999864 23444445677789999999999999999999999 5
Q ss_pred ecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHH--hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 015435 269 CKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYK--EWTLELKAMADRIISMRQQLFDALSARGTPGDWS 346 (407)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 346 (407)
.+ +.+...+...++......+++.|.+...++....... .-..+...+.+.++++|+.|.+.|.++| +.
T Consensus 259 gp-----~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg----~~ 329 (420)
T KOG0257|consen 259 GP-----KHLYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEELG----LK 329 (420)
T ss_pred ch-----HHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcC----Cc
Confidence 65 5567777777777777788888888887776543100 0002344588999999999999999998 89
Q ss_pred cccCCceeEEecCCC-----------------HHHHHHhHhhccEEEcCCC---------------eEEecCCCCCChhH
Q 015435 347 HIIKQIGMFTFTGLN-----------------SEQVAFMTKEYHIYMTSDG---------------RISMAGLSSKTVPH 394 (407)
Q Consensus 347 ~~~~~~~~~~~~~~~-----------------~~~~~~~l~~~gi~~~~gg---------------Ris~~~~~~e~i~~ 394 (407)
+..|+|+||+|.+++ -.+..+++++.|+.+.|+. |+++.. +.+.++.
T Consensus 330 v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k-~~~~L~~ 408 (420)
T KOG0257|consen 330 VTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCK-ADETLRK 408 (420)
T ss_pred cccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHh-hHHHHHH
Confidence 999999999998653 1235688899999998862 667765 6677777
Q ss_pred HHHHHH
Q 015435 395 LTDAIH 400 (407)
Q Consensus 395 ~~~~l~ 400 (407)
+.++++
T Consensus 409 a~e~l~ 414 (420)
T KOG0257|consen 409 AIERLK 414 (420)
T ss_pred HHHHHh
Confidence 777776
No 10
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.4e-47 Score=362.51 Aligned_cols=369 Identities=15% Similarity=0.193 Sum_probs=282.0
Q ss_pred cccccCCCCCchhhhhHhhh--hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHH
Q 015435 7 FGKIVRAPEDPILGVTVAYN--KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLS 84 (407)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~ 84 (407)
|.++...+.+++..+..... ...+.++++|+.|.| +. +.|...++++.+.+. .....+|++..|.+++|+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~p---~~-~~~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lR~~i 80 (403)
T PRK08636 7 FNKIKRLPKYVFAEVNELKMAARRAGEDIIDFSMGNP---DG-PTPQHIIDKLCESAQ--KPKTHGYSVSKGIYKLRLAI 80 (403)
T ss_pred HHHHHhCCccHHHHHHHHHHHHHhcCCCEEEcCCcCC---CC-CCCHHHHHHHHHHhc--CCccCCCCCCCCCHHHHHHH
Confidence 45566666665544444332 224578999999976 44 456667777766664 23467899999999999999
Q ss_pred HHHHhCCCCCCCCCC-ceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCc
Q 015435 85 AKLILGADSPAIKDN-RVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGL 163 (407)
Q Consensus 85 a~~~~~~~~~~~~~~-~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~ 163 (407)
++++...++..++++ +|++ |+|+++++.+++ ...+.+||+|++++|+|+.+...++..|++++.+++..+.++++
T Consensus 81 a~~l~~~~~~~~~~~~~I~i--t~G~~~al~~~~--~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 156 (403)
T PRK08636 81 CNWYKRKYNVDLDPETEVVA--TMGSKEGYVHLV--QAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFEL 156 (403)
T ss_pred HHHHHHHhCCCCCCCCeEEE--CCChHHHHHHHH--HHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCcc
Confidence 999965556666777 7999 999999999995 34478999999999999999999999999999999842345789
Q ss_pred ChhhH----HHHHHcC-CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHH
Q 015435 164 NFQGL----LEDLRAA-PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMF 238 (407)
Q Consensus 164 d~~~l----~~~i~~~-~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~ 238 (407)
|++.+ ++.+.+. ++++++++ ++||||||.++|.+++++|+++|++|+++||+||+|.++.+++. ...++..+
T Consensus 157 d~~~l~~~l~~~~~~~~~~~~~i~~-~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~--~~~~~~~~ 233 (403)
T PRK08636 157 DEDQFFENLEKALRESSPKPKYVVV-NFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGY--KTPSILEV 233 (403)
T ss_pred ChhhhhhHHHHHHhhccCCceEEEE-eCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCC--CCCChhcC
Confidence 98865 4444432 34555555 89999999999999999999999999999999999999987642 22333333
Q ss_pred HHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHH
Q 015435 239 VADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLEL 318 (407)
Q Consensus 239 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 318 (407)
....+.+++++||||.||+||+|+||+ +++ ++ ++..+.........+++.+.|.++..+++... +++
T Consensus 234 ~~~~~~~i~~~S~SK~~~~~GlRiG~i--v~~-~~----li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~------~~~ 300 (403)
T PRK08636 234 EGAKDVAVESYTLSKSYNMAGWRVGFV--VGN-KK----LVGALKKIKSWLDYGMFTPIQVAATIALDGDQ------SCV 300 (403)
T ss_pred CCccccEEEEEecccccCCccceeeee--eCC-HH----HHHHHHHHHHHhcccCChHHHHHHHHHHhCcH------HHH
Confidence 223356788999999999999999999 555 44 44444444433334666777887776665332 567
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCC--------HHHHHHhHhhccEEEcCCC----------
Q 015435 319 KAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN--------SEQVAFMTKEYHIYMTSDG---------- 380 (407)
Q Consensus 319 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~gi~~~~gg---------- 380 (407)
+++++.++++++.+.+.|++.+ +.+..|.+|+|.|+.+. .+++..+++++||.+.||.
T Consensus 301 ~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~i 376 (403)
T PRK08636 301 EEIRETYRKRRDVLIESFANAG----WELQKPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYV 376 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC----CcccCCCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeE
Confidence 7888999999999999999876 67778899999999763 3445677878999999971
Q ss_pred eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 381 RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 381 Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
||+++ .+++++++++++|+++++++
T Consensus 377 Ri~~~-~~~~~l~~~~~rl~~~l~~~ 401 (403)
T PRK08636 377 RIALI-ENENRIRQAARNIKKFLKEL 401 (403)
T ss_pred EEEec-CCHHHHHHHHHHHHHHHHhh
Confidence 99998 48899999999999998764
No 11
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=4.3e-47 Score=361.98 Aligned_cols=365 Identities=14% Similarity=0.154 Sum_probs=272.0
Q ss_pred cccccCCCCCchhhhhHhhh--hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHH
Q 015435 7 FGKIVRAPEDPILGVTVAYN--KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLS 84 (407)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~ 84 (407)
.+|+...+.+.+....+... ...+.++|+|+.|.+ .. +.++.+.+++...+. .....+|++..|.++||+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~---~~-~~~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lr~ai 77 (388)
T PRK07366 4 AQRLQPLQSNVFADMDRAKAQARAAGKELIDLSLGSS---DL-PAPAHALEAIAQSLH--DPSTHGYLLFHGTLDFREAA 77 (388)
T ss_pred hhhhhcCCccHHHHHHHHHHHHHhcCCCeEEeCCCCC---CC-CCCHHHHHHHHHHHh--CcccCCCCCCCCCHHHHHHH
Confidence 34444444333333333222 334678999999985 22 445555555555553 23456798889999999999
Q ss_pred HHHHhCCCCCCCCCC-ceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCc
Q 015435 85 AKLILGADSPAIKDN-RVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGL 163 (407)
Q Consensus 85 a~~~~~~~~~~~~~~-~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~ 163 (407)
++++...++..++++ +|++ |+|+++++.++. ...+.+||+|++++|+|+.+...++..|++++.+|+..+.++.+
T Consensus 78 a~~~~~~~g~~~~~~~~I~i--t~Gs~~al~~~~--~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 153 (388)
T PRK07366 78 AQWYEQRFGLAVDPETEVLP--LIGSQEGTAHLP--LAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLP 153 (388)
T ss_pred HHHHHHhhCCcCCCcCeEEE--CCCcHHHHHHHH--HHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCC
Confidence 999966666667777 6999 999999999985 34477999999999999999999999999999999953445678
Q ss_pred ChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCC
Q 015435 164 NFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGG 243 (407)
Q Consensus 164 d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~ 243 (407)
|++++++.+. ++++++++ ++||||||.+++.+++++|+++|++||++||+||+|.++.+++.. ...++..+....+
T Consensus 154 d~~~l~~~~~--~~~k~i~l-~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~-~~~~~~~~~~~~~ 229 (388)
T PRK07366 154 VFADIPTEVL--AQARLMVL-SYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEV-EPPSILQADPEKS 229 (388)
T ss_pred CHHHHHHhhc--ccceEEEE-eCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCC-CCCChhhCCCCcc
Confidence 8889988775 45667666 889999999999999999999999999999999999999876421 1223333322345
Q ss_pred cEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHH
Q 015435 244 ECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMAD 323 (407)
Q Consensus 244 ~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 323 (407)
++++++||||.||++|+|+||+ +++ ++ +.+.+.........+.+...+.++...+.+. .+++++.++
T Consensus 230 ~vi~~~SfSK~~g~~GlRiG~~--v~~-~~----li~~l~~~~~~~~~~~~~~~~~~a~~~l~~~------~~~l~~~~~ 296 (388)
T PRK07366 230 VSIEFFTLSKSYNMGGFRIGFA--IGN-AQ----LIQALRQVKAVVDFNQYRGILNGAIAALTGP------QATVQQTVQ 296 (388)
T ss_pred cEEEEeecccccCCcchhheeh--cCC-HH----HHHHHHHHHhhcccCCCHHHHHHHHHHHhCc------HHHHHHHHH
Confidence 7899999999999999999999 554 44 4444544444333344333344444444332 256888999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCC------H-HHHHHhHhhccEEEcCCC----------eEEecC
Q 015435 324 RIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN------S-EQVAFMTKEYHIYMTSDG----------RISMAG 386 (407)
Q Consensus 324 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~l~~~gi~~~~gg----------Ris~~~ 386 (407)
.++++++++.+.|++.+ +.+..|.+|+|.|+.+. . +++..+++++||.+.||. ||+++.
T Consensus 297 ~~~~~r~~l~~~L~~~~----~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~ 372 (388)
T PRK07366 297 IFRQRRDAFINALHQIG----WPVPLPEATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVH 372 (388)
T ss_pred HHHHHHHHHHHHHHHCC----CcccCCCeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecC
Confidence 99999999999999886 67677889999999663 2 335567788999999861 999986
Q ss_pred CCCCChhHHHHHHHHHH
Q 015435 387 LSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 387 ~~~e~i~~~~~~l~~~l 403 (407)
+++++++++++|++++
T Consensus 373 -~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 373 -DPDILEEAVERIAAFL 388 (388)
T ss_pred -CHHHHHHHHHHHHHhC
Confidence 7889999999998753
No 12
>PLN02187 rooty/superroot1
Probab=100.00 E-value=1.4e-46 Score=363.07 Aligned_cols=365 Identities=13% Similarity=0.158 Sum_probs=282.4
Q ss_pred CchhhhhHhh----hhcCCCCeeeeeeeeeecCCCcc---ccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHH
Q 015435 16 DPILGVTVAY----NKDTSPVKLNLGVGAYRTEEGKP---LVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLI 88 (407)
Q Consensus 16 ~~~~~~~~~~----~~~~~~~~i~l~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~ 88 (407)
.+|+.+...+ ....++++|+|+.|.| +..| .|.++.+++.+.+. ......|.+..|.+++|+++|+++
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~vi~l~~Gdp---~~~p~~~~~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lR~aiA~~~ 121 (462)
T PLN02187 47 VTLRGVIYMLFDNCGKDVNKTILPLGHGDP---SVYPCFRTCIEAEDAVVDVLR--SGKGNSYGPGAGILPARRAVADYM 121 (462)
T ss_pred chHhhHHHHHHhhcccCCCCCeEECCCCCC---CCCCCCCCCHHHHHHHHHHHh--CCCCCCCCCCCChHHHHHHHHHHH
Confidence 3455554433 2344689999999975 4323 24456666666564 334567999999999999999999
Q ss_pred hCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhH
Q 015435 89 LGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGL 168 (407)
Q Consensus 89 ~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l 168 (407)
....+..+++++|++ |+|+++++.+++ ...+.+||+|++++|+|+.|...++..|++++.+++..+.++++|++++
T Consensus 122 ~~~~~~~~~~~~I~i--t~G~~~al~~~~--~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l 197 (462)
T PLN02187 122 NRDLPHKLTPEDIFL--TAGCNQGIEIVF--ESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGI 197 (462)
T ss_pred HHhcCCCCCcccEEE--eCCHHHHHHHHH--HHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHH
Confidence 655566788899999 999999999995 3447899999999999999999999999999999985445689999999
Q ss_pred HHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEE
Q 015435 169 LEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVA 248 (407)
Q Consensus 169 ~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 248 (407)
++++. ++++++++ ++||||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+.. ..+++++
T Consensus 198 ~~~~~--~~~~~v~i-~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~--~~~s~~~~~~-~~~vi~l 271 (462)
T PLN02187 198 EAIAD--ENTVAMVV-INPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDN--PFVSMGKFAS-IVPVLTL 271 (462)
T ss_pred HHhcC--CCcEEEEE-eCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCC--CceeHHHhcc-CCcEEEE
Confidence 99876 55666666 89999999999999999999999999999999999999988642 2223333322 2469999
Q ss_pred EecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccC--CCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHH
Q 015435 249 QSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYS--SPPIHGASIVATILKDSTMYKEWTLELKAMADRII 326 (407)
Q Consensus 249 ~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (407)
+||||.|++||+|+||+ ++++++..-.+.+.+......... +++.+.|.++..++++.. .+++++.++.++
T Consensus 272 ~SfSK~f~~pGlRiG~~--v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~-----~~~l~~~~~~l~ 344 (462)
T PLN02187 272 AGISKGWVVPGWKIGWI--ALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKAD-----KNFFAKKNKILK 344 (462)
T ss_pred ecchhhcCCccceeEEE--EecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCc-----HHHHHHHHHHHH
Confidence 99999999999999999 576554221223344444443333 457899999999987521 256888889999
Q ss_pred HHHHHHHHHHHhcCCCCCcc-cccCCceeEEecCCC---------H-HHHHHhHhhccEEEcCCC--------eEEecCC
Q 015435 327 SMRQQLFDALSARGTPGDWS-HIIKQIGMFTFTGLN---------S-EQVAFMTKEYHIYMTSDG--------RISMAGL 387 (407)
Q Consensus 327 ~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~---------~-~~~~~~l~~~gi~~~~gg--------Ris~~~~ 387 (407)
++++++.+.|++.+. .. +..|.+++|.|+.++ . +++.+++.++||.+.||. ||+++.
T Consensus 345 ~~r~~l~~~L~~~~~---~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~- 420 (462)
T PLN02187 345 HNVDLVCDRLKDIPC---VVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGV- 420 (462)
T ss_pred HHHHHHHHHHhhCCC---CcCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCC-
Confidence 999999999998752 22 346789999998542 2 456778888999999972 999996
Q ss_pred CCCChhHHHHHHHHHHHhh
Q 015435 388 SSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 388 ~~e~i~~~~~~l~~~l~~~ 406 (407)
+++.++.++++|+++++++
T Consensus 421 ~~e~l~~al~rL~~~l~~~ 439 (462)
T PLN02187 421 EAHMLEDALERLKGFCTRH 439 (462)
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 7888999999999998753
No 13
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=1.9e-46 Score=365.54 Aligned_cols=359 Identities=17% Similarity=0.150 Sum_probs=274.8
Q ss_pred CCCCeeeeeeeeeecCCC-------------ccc-------------cchhHHHHHHHHhccccccccCCCCCCcHHHHH
Q 015435 29 TSPVKLNLGVGAYRTEEG-------------KPL-------------VLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNK 82 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~-------------~~~-------------~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~ 82 (407)
++.++|+|++|.|.+ .| ... |..+++++.+.+.........|++..|.+++|+
T Consensus 44 ~~~~vi~~~~G~p~~-~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~ 122 (481)
T PTZ00377 44 PFDSIVYCNIGNPQA-LGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRK 122 (481)
T ss_pred CcceeEEcCCCChhh-cCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHH
Confidence 457999999999721 00 122 446676665544411224567999999999999
Q ss_pred HHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhh-cCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCC
Q 015435 83 LSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARH-YHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATR 161 (407)
Q Consensus 83 ~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~-~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~ 161 (407)
++++++...++..+++++|++ |+|+++++.+++. ..+ .+||.|++++|+|+.|...++..|.+++.+++..++++
T Consensus 123 aia~~~~~~~g~~~~~~~I~i--t~Ga~~al~~~~~--~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~ 198 (481)
T PTZ00377 123 AVAAFIERRDGVPKDPSDIFL--TDGASSGIKLLLQ--LLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGW 198 (481)
T ss_pred HHHHHHHHhcCCCCChhhEEE--cCCHHHHHHHHHH--HhccCCCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCC
Confidence 999999766677778899999 9999999999953 336 69999999999999999999999999999999545567
Q ss_pred CcChhhHHHHHHcC----CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHH
Q 015435 162 GLNFQGLLEDLRAA----PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRM 237 (407)
Q Consensus 162 ~~d~~~l~~~i~~~----~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~ 237 (407)
++|++++++.+... .+++++++ ++||||||.+++.+++++|+++|++||++||+||+|.++.+++. ....++..
T Consensus 199 ~~d~~~l~~~l~~~~~~~~~~k~l~l-~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~-~~~~s~~~ 276 (481)
T PTZ00377 199 SLDQEELEEAYEQAVRNGITPRALVV-INPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGE-KPFISFRK 276 (481)
T ss_pred CCCHHHHHHHHHHHHhcCCCeeEEEE-ECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCC-CCcccHHH
Confidence 89999999998631 14566666 79999999999999999999999999999999999999988431 12223322
Q ss_pred HH-H---c---CCcEEEEEecCcc-ccccCCCcceeEEee--cChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcC
Q 015435 238 FV-A---D---GGECLVAQSYAKN-MGLYGERVGALSIVC--KTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKD 307 (407)
Q Consensus 238 ~~-~---~---~~~~i~~~s~sK~-~~~~G~r~G~~~~v~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 307 (407)
+. . . ..++++++||||. +++||+|+||+ ++ .++++. +.+...+. ...+++.++|.++..++++
T Consensus 277 ~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~--~~~~~p~~li----~~l~~~~~-~~~~~~~~~Q~a~~~~l~~ 349 (481)
T PTZ00377 277 VLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYF--ELTNIPPEVR----EQIYKLAS-INLCSNVVGQLMTGLMCNP 349 (481)
T ss_pred HHHhhcccccCCeEEEEEecCCcccccCCcCceEEE--EEeCCCHHHH----HHHHHHhh-eecCCChHHHHHHHHHhCC
Confidence 21 1 1 1268999999997 69999999999 45 245444 44444432 2346888999999999864
Q ss_pred h----hhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCC-----------------HHHHH
Q 015435 308 S----TMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN-----------------SEQVA 366 (407)
Q Consensus 308 ~----~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~ 366 (407)
. ..++.|.+...+.+++++++++++.+.|++.+. +.+..|+||+|.|+.+. .+++.
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g---~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~ 426 (481)
T PTZ00377 350 PREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEG---VSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCL 426 (481)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---cEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHH
Confidence 2 222335555666677789999999999988732 78889999999996431 12356
Q ss_pred HhHhhccEEEcCCC-----------eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 367 FMTKEYHIYMTSDG-----------RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 367 ~~l~~~gi~~~~gg-----------Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
.+++++||.+.||. ||+++ .+++++++++++|++++++
T Consensus 427 ~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~-~~~e~l~~~l~rl~~~~~~ 475 (481)
T PTZ00377 427 ELLESTGIVVVPGSGFGQKPGTYHFRITIL-PPEEQIEEMVKKIKEFHES 475 (481)
T ss_pred HHHHHcCEEEeCCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHHHH
Confidence 78888999999862 99999 4778999999999998864
No 14
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-46 Score=359.37 Aligned_cols=362 Identities=12% Similarity=0.145 Sum_probs=278.4
Q ss_pred ccccccCCCCCchhhhhHhhh--hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHH
Q 015435 6 VFGKIVRAPEDPILGVTVAYN--KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKL 83 (407)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ 83 (407)
+.+|++...++.+........ ...++++|||+.|.+ .. +.+..+.+++...+. .....+|. ..|.+++|++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p---~~-~~~~~~~~~~~~~~~--~~~~~~y~-~~G~~~lr~a 77 (399)
T PRK07681 5 LATRMKAFQSSIFSELGAYKKEKIAAGHKMIDLSIGNP---DM-PPADFVREEMVHTAN--QKESYGYT-LSGIQEFHEA 77 (399)
T ss_pred HhHHHhhcCccHHHHHHHHHHHhhhcCCCeEEeCCCCC---CC-CCCHHHHHHHHHHHh--ccccCCCC-CCCcHHHHHH
Confidence 445666555555555444332 234578999999985 22 334344444444433 22334454 5899999999
Q ss_pred HHHHHhCCCCCCCCC-CceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCC
Q 015435 84 SAKLILGADSPAIKD-NRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRG 162 (407)
Q Consensus 84 ~a~~~~~~~~~~~~~-~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ 162 (407)
+++++...++..+++ ++|++ |+|+++++.+++ ...+.+||.|++++|+|+.+...++..|++++.+|++++.++.
T Consensus 78 ia~~~~~~~g~~~~~~~~I~i--t~G~~~al~~~~--~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~ 153 (399)
T PRK07681 78 VTEYYNNTHNVILNADKEVLL--LMGSQDGLVHLP--MVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFL 153 (399)
T ss_pred HHHHHHHHhCCCCCCCCeEEE--CCCcHHHHHHHH--HHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCc
Confidence 999996656666777 79999 999999999985 4447899999999999999999999999999999995444567
Q ss_pred cChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcC
Q 015435 163 LNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADG 242 (407)
Q Consensus 163 ~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~ 242 (407)
+|++++++.+. ++++++++ ++||||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+....
T Consensus 154 ~d~~~l~~~~~--~~~k~v~l-~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~~ 228 (399)
T PRK07681 154 PDLELIPEEIA--DKAKMMIL-NFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGN--KPISFLSVPGAK 228 (399)
T ss_pred CCHHHHHHhcc--ccceEEEE-eCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCC--CCCChhhCCCCc
Confidence 89999998886 45677666 89999999999999999999999999999999999999987642 122332222234
Q ss_pred CcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHH
Q 015435 243 GECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMA 322 (407)
Q Consensus 243 ~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 322 (407)
+++|+++||||.|+++|+|+||+ +++ ++ +.+.+.........+++.+.|.++..++++.. +++++.+
T Consensus 229 ~~~i~~~S~SK~~~~~GlRiG~~--i~~-~~----l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~------~~~~~~~ 295 (399)
T PRK07681 229 EVGVEINSLSKSYSLAGSRIGYM--IGN-EE----IVRALTQFKSNTDYGVFLPIQKAACAALRNGA------AFCEKNR 295 (399)
T ss_pred ccEEEEeecccccCCccceeEEE--ecC-HH----HHHHHHHHHhhcccCCCHHHHHHHHHHHhCcH------HHHHHHH
Confidence 67899999999999999999999 565 44 44445545444455788889999999998753 4577788
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCC----CH-HHHHHhHhhccEEEcCCC----------eEEecCC
Q 015435 323 DRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL----NS-EQVAFMTKEYHIYMTSDG----------RISMAGL 387 (407)
Q Consensus 323 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~l~~~gi~~~~gg----------Ris~~~~ 387 (407)
+.++++++++.+.|++.+ +.+..|.+|+|.|+.+ +. +++.++++++||.+.||. ||+++.
T Consensus 296 ~~~~~~~~~l~~~L~~~g----~~~~~p~~g~f~~~~l~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~- 370 (399)
T PRK07681 296 GIYQERRDTLVDGFRTFG----WNVDKPAGSMFVWAEIPKGWTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQ- 370 (399)
T ss_pred HHHHHHHHHHHHHHHHCC----CcccCCCeeeEEEEECCCCCCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecC-
Confidence 899999999999999886 6777788999999865 23 456677777999998861 999985
Q ss_pred CCCChhHHHHHHHH
Q 015435 388 SSKTVPHLTDAIHA 401 (407)
Q Consensus 388 ~~e~i~~~~~~l~~ 401 (407)
+++++++++++|++
T Consensus 371 ~~~~~~~~l~~l~~ 384 (399)
T PRK07681 371 DEEVLQQAVENIRN 384 (399)
T ss_pred CHHHHHHHHHHHHH
Confidence 77999999999988
No 15
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=2.3e-46 Score=358.12 Aligned_cols=360 Identities=15% Similarity=0.165 Sum_probs=278.6
Q ss_pred hhhhHhhhhcCCCCeeeeeeeeeecCC---CccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCC
Q 015435 19 LGVTVAYNKDTSPVKLNLGVGAYRTEE---GKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPA 95 (407)
Q Consensus 19 ~~~~~~~~~~~~~~~i~l~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~ 95 (407)
......+.++.++++|+|++|.| + ..+.|+.+.+++.+.+. .....+|+|..|.+++|+++++++...++..
T Consensus 20 ~~~~~~~~~~~~~~~i~l~~G~p---~~~~~~~~p~~~~~a~~~~~~--~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~ 94 (409)
T PLN00143 20 KFLKENFNEDDHRLAISFGFGDP---SCFECFRTTNIAEDAIVEAVR--SAKFNSYAPTGGILPARRAIADYLSNDLPYQ 94 (409)
T ss_pred HHHHHhcccCCCCceeeCCCCCC---CCCCCCCCCHHHHHHHHHHHh--CcCCCCCCCCCCCHHHHHHHHHHHHhhcCCC
Confidence 33344445677899999999986 3 12556666666666664 3334669999999999999999997666667
Q ss_pred CCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC
Q 015435 96 IKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA 175 (407)
Q Consensus 96 ~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 175 (407)
+++++|++ |+|+++++.++. ...+.+||.|++++|+|+.+...++..|.+++.+++.+++++.+|++++++++.
T Consensus 95 ~~~~~I~i--t~G~~~al~~~~--~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-- 168 (409)
T PLN00143 95 LSPDDVYL--TLGCKHAAEIII--KVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIAD-- 168 (409)
T ss_pred CCHhhEEE--ecChHHHHHHHH--HHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcc--
Confidence 78899999 999999999995 344789999999999999999999999999999998544567899999998876
Q ss_pred CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccc
Q 015435 176 PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNM 255 (407)
Q Consensus 176 ~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 255 (407)
++++.+++ ++||||||.+++.+++++|+++|++|+++||+||+|.++.+++. ...++..+ ...+++++++||||.|
T Consensus 169 ~~~~~~~~-~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~--~~~~~~~~-~~~~~vi~~~SfSK~f 244 (409)
T PLN00143 169 ENTIAMVI-INPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSK--PFVPMGLF-ASIVPVITLGSISKRW 244 (409)
T ss_pred cCCEEEEE-ECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCC--CCcchhhh-cccCcEEEEccchhhc
Confidence 45666666 89999999999999999999999999999999999999988642 11222222 3345799999999999
Q ss_pred cccCCCcceeEEeecCh-hhHH--HHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHH
Q 015435 256 GLYGERVGALSIVCKTE-DVAS--RVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQL 332 (407)
Q Consensus 256 ~~~G~r~G~~~~v~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 332 (407)
+++|+|+||+ +++++ .+.+ .+...+...... ...++.+.|.++..++++.. ..++++.+++++++++.+
T Consensus 245 ~~pGlRvG~~--v~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~~ 316 (409)
T PLN00143 245 MIPGWGLGWL--VTCDPSGLLQICEIADSIKKALNP-APFPPTFIQAAIPEILEKTT-----EDFFSKTINILRAALAFC 316 (409)
T ss_pred CCCccceEEE--EeeCchhhhhhHHHHHHHHHHHhc-cCCCCchHHHHHHHHHhcCh-----HHHHHHHHHHHHHHHHHH
Confidence 9999999999 67544 2222 122333333222 22457788999998887531 145677788888889999
Q ss_pred HHHHHhcCCCCCcc-cccCCceeEEecCCC----------HHHHHHhHhhccEEEcCCC--------eEEecCCCCCChh
Q 015435 333 FDALSARGTPGDWS-HIIKQIGMFTFTGLN----------SEQVAFMTKEYHIYMTSDG--------RISMAGLSSKTVP 393 (407)
Q Consensus 333 ~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~~l~~~gi~~~~gg--------Ris~~~~~~e~i~ 393 (407)
.+.|++++. .. ...|.+|+|.|+.+. .+++.++++++||.+.||. ||+++. ++++++
T Consensus 317 ~~~L~~~~~---~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~-~~~~l~ 392 (409)
T PLN00143 317 YDKLKEIPC---IMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAV-EQSSLE 392 (409)
T ss_pred HHHHhcCCC---CCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcC-CHHHHH
Confidence 999988652 22 346889999999763 2345677788999999972 999995 789999
Q ss_pred HHHHHHHHHHHh
Q 015435 394 HLTDAIHAAVTR 405 (407)
Q Consensus 394 ~~~~~l~~~l~~ 405 (407)
+++++|++++++
T Consensus 393 ~al~rl~~~l~~ 404 (409)
T PLN00143 393 DGLGRLKSFCGR 404 (409)
T ss_pred HHHHHHHHHHHH
Confidence 999999999865
No 16
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2e-46 Score=356.52 Aligned_cols=360 Identities=14% Similarity=0.139 Sum_probs=282.3
Q ss_pred cccccCCCCCchhhhhHhhhhcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHH
Q 015435 7 FGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAK 86 (407)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~ 86 (407)
.+++.......+.......+. .+++|||+.|.+ .. +.++..++++..... .....|++..|.+++|+++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~g~p---~~-~~~~~~~~~~~~~~~---~~~~~Y~~~~G~~~lr~~ia~ 77 (384)
T PRK06348 7 AKKYQQMEVNIMAEIATLAKK--FPDIIDLSLGDP---DL-ITDESIINAAFEDAK---KGHTRYTDSGGDVELIEEIIK 77 (384)
T ss_pred HHHHhcCCccHHHHHHHHHHh--cCCcEEcCCCCC---CC-CCCHHHHHHHHHHHh---cCCCCCCCCCCcHHHHHHHHH
Confidence 455555555555555554332 357899999975 33 334455555655553 235679999999999999999
Q ss_pred HHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChh
Q 015435 87 LILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQ 166 (407)
Q Consensus 87 ~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~ 166 (407)
++...++..+++++|++ |+|+++++.+++ ...+.+||+|++++|+|..+...++..|.+++.+++.+++++.+|++
T Consensus 78 ~~~~~~~~~~~~~~i~i--t~G~~~al~~~~--~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 153 (384)
T PRK06348 78 YYSKNYDLSFKRNEIMA--TVGACHGMYLAL--QSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVK 153 (384)
T ss_pred HHHHHhCCCCChhhEEE--cCChHHHHHHHH--HHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHH
Confidence 99666666778899999 999999999995 44478999999999999999999999999999998754456779999
Q ss_pred hHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEE
Q 015435 167 GLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECL 246 (407)
Q Consensus 167 ~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i 246 (407)
++++.+. ++++++++ ++||||||.++|.+++++|+++|++||++||+||+|.++.+++. ..++..+....++++
T Consensus 154 ~l~~~~~--~~~~~v~l-~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~---~~~~~~~~~~~~~vi 227 (384)
T PRK06348 154 KLEALIT--SKTKAIIL-NSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYED---FVPMATLAGMPERTI 227 (384)
T ss_pred HHHHhhC--cCccEEEE-eCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCC---ccchhhcCCCcCcEE
Confidence 9999886 45677777 79999999999999999999999999999999999999987631 223322322256899
Q ss_pred EEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHH
Q 015435 247 VAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRII 326 (407)
Q Consensus 247 ~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (407)
+++||||.++++|+|+||+ +++ +.+.+.+.........+++.+.|.++..++.+.+ ++++++++.++
T Consensus 228 ~~~SfSK~~~l~GlRiG~~--v~~-----~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~~~ 294 (384)
T PRK06348 228 TFGSFSKDFAMTGWRIGYV--IAP-----DYIIETAKIINEGICFSAPTISQRAAIYALKHRD------TIVPLIKEEFQ 294 (384)
T ss_pred EEecchhccCCccccceee--ecC-----HHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcH------HHHHHHHHHHH
Confidence 9999999999999999999 576 4456656656555556788899999998887543 55778889999
Q ss_pred HHHHHHHHHHHhcCCCCCcccccCCceeEEecCC-----CHH-HHHHhHhhccEEEcCCC----------eEEecCCCCC
Q 015435 327 SMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL-----NSE-QVAFMTKEYHIYMTSDG----------RISMAGLSSK 390 (407)
Q Consensus 327 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~l~~~gi~~~~gg----------Ris~~~~~~e 390 (407)
++++++.+.|+..+. +.+..|.+|+|.|+.+ +.+ ++..+++++||.+.||. ||+++. +++
T Consensus 295 ~r~~~~~~~L~~~~~---~~~~~p~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~ 370 (384)
T PRK06348 295 KRLEYAYKRIESIPN---LSLHPPKGSIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTV-GIE 370 (384)
T ss_pred HHHHHHHHHHhcCCC---ceeccCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecC-CHH
Confidence 999999999987642 6777889999999754 333 45566777899999862 999984 888
Q ss_pred ChhHHHHHHHHH
Q 015435 391 TVPHLTDAIHAA 402 (407)
Q Consensus 391 ~i~~~~~~l~~~ 402 (407)
+++.++++|+++
T Consensus 371 ~l~~al~~l~~~ 382 (384)
T PRK06348 371 VLEEAFNRIEKM 382 (384)
T ss_pred HHHHHHHHHHhh
Confidence 899999998764
No 17
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=2.5e-46 Score=367.64 Aligned_cols=373 Identities=17% Similarity=0.181 Sum_probs=284.9
Q ss_pred cccccCCCCCchhhhhHhhh--hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHH
Q 015435 7 FGKIVRAPEDPILGVTVAYN--KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLS 84 (407)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~ 84 (407)
.+|+...+.+.+..+...++ ...+.++|+|++|.| ++.+.+.|..+++++.+++. ...+|++..|.++||+++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p-~~~~~~~p~~~~~~~~~~~~----~~~~Y~~~~G~~~lReai 194 (517)
T PRK13355 120 SHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNP-APFGFRTPDEVVYDMAQQLT----DTEGYSDSKGLFSARKAI 194 (517)
T ss_pred hHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCC-CcCCCCCCHHHHHHHHHHhh----cCCCCCCCcChHHHHHHH
Confidence 45555555554444444333 335679999999986 23344557777777777664 245699999999999999
Q ss_pred HHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcC
Q 015435 85 AKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLN 164 (407)
Q Consensus 85 a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 164 (407)
++++...+...+++++|++ |+|+++++.+++ ...+.+||+|++++|+|+.|...++.+|.+++.+++..+.++.+|
T Consensus 195 a~~~~~~~~~~~~~~~I~i--t~G~~eal~~~~--~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d 270 (517)
T PRK13355 195 MQYAQLKGLPNVDVDDIYT--GNGVSELINLSM--SALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPD 270 (517)
T ss_pred HHHHHhcCCCCCChhHEEE--eCcHHHHHHHHH--HHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCC
Confidence 9999554444578899999 999999999985 344789999999999999999999999999999998544457899
Q ss_pred hhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCc
Q 015435 165 FQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGE 244 (407)
Q Consensus 165 ~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~ 244 (407)
++++++++. ++++++++ ++||||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+. ....
T Consensus 271 ~~~l~~~~~--~~~k~i~i-~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~--~~~s~~~~~-~~~~ 344 (517)
T PRK13355 271 IDDIRSKIT--SRTKAIVI-INPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGL--EHTSIASLA-PDLF 344 (517)
T ss_pred HHHHHHhcC--cCceEEEE-ECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCC--CcccHHHhC-CCCe
Confidence 999999887 56777777 89999999999999999999999999999999999999998642 223333321 1234
Q ss_pred EEEEEecCccccccCCCcceeEEee-cChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHH
Q 015435 245 CLVAQSYAKNMGLYGERVGALSIVC-KTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMAD 323 (407)
Q Consensus 245 ~i~~~s~sK~~~~~G~r~G~~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 323 (407)
+++++||||.|+++|+|+||+ ++ .++++.+.+...+.... ....+++.++|.++..+|.+.+. +.+++.+. .
T Consensus 345 vi~~~S~SK~~~~~G~RiG~~--i~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~a~~~aL~~~~~---~~~~~~~~-~ 417 (517)
T PRK13355 345 CVTFSGLSKSHMIAGYRIGWM--ILSGNKRIAKDYIEGLNMLA-NMRLCSNVPAQSIVQTALGGHQS---VKDYLVPG-G 417 (517)
T ss_pred EEEEecchhhccCcccceEEE--EeeCchhhHHHHHHHHHHHh-cCcCCcChHHHHHHHHHhcCCcc---HHHHHHHH-H
Confidence 677899999999999999999 44 44554444555444332 23346788899999998865321 22344443 3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCC---------HHHHHHhHhhccEEEcCCC----------eEEe
Q 015435 324 RIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN---------SEQVAFMTKEYHIYMTSDG----------RISM 384 (407)
Q Consensus 324 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~~gi~~~~gg----------Ris~ 384 (407)
++.++++++.+.|++++. +.+..|+|+||.|+.++ .+++.++|+++||.+.||. ||++
T Consensus 418 ~~~~~r~~l~~~L~~~~g---~~~~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~ 494 (517)
T PRK13355 418 RVYEQRELVYNALNAIPG---ISAVKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVY 494 (517)
T ss_pred HHHHHHHHHHHHHhcCCC---cccCCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEe
Confidence 445668999999988732 78889999999997552 3567788888999999861 9999
Q ss_pred cCCCCCChhHHHHHHHHHHHh
Q 015435 385 AGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 385 ~~~~~e~i~~~~~~l~~~l~~ 405 (407)
+. ++++++.++++|++++++
T Consensus 495 ~~-~~~~l~~a~~rl~~~~~~ 514 (517)
T PRK13355 495 LP-RLEDLEDAMDRLADFFSY 514 (517)
T ss_pred CC-CHHHHHHHHHHHHHHHHH
Confidence 74 889999999999999875
No 18
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=7.2e-46 Score=356.83 Aligned_cols=355 Identities=13% Similarity=0.134 Sum_probs=272.9
Q ss_pred CCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCC
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLS 108 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g 108 (407)
.+.+++++++|.|. ..+.+.|....+++.+.+. .....+|++..|.+++|+++++++...++..+++++|++ |+|
T Consensus 30 ~g~~~~~~~~G~p~-~~~~~~p~~~~~a~~~~~~--~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~i--t~G 104 (433)
T PRK06855 30 LGVKITWENIGDPI-AKGEKIPDWMKEIVAELVM--DDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIF--FNG 104 (433)
T ss_pred ccccccccccCCCc-ccCCCCCHHHHHHHHHHhh--cCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEE--cCc
Confidence 45689999999861 1122445444444444443 234567999999999999999999666677788899999 999
Q ss_pred cccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHH-hhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCC
Q 015435 109 GTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVF-TLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACA 187 (407)
Q Consensus 109 ~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~-~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p 187 (407)
+++++.+++ ..+.+||.|++++|+|+.+.... ...|++++.+++..+.++++|++++++.+...++++++++ ++|
T Consensus 105 ~~~al~~~~---~l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l-~~P 180 (433)
T PRK06855 105 LGDAIAKIY---GLLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILL-INP 180 (433)
T ss_pred HHHHHHHHH---HhcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEE-ECC
Confidence 999998884 35789999999999999987553 4568999999985345678999999999874344566666 799
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEE
Q 015435 188 HNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSI 267 (407)
Q Consensus 188 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 267 (407)
|||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+.. ...+|+++||||.|++||+|+||+
T Consensus 181 ~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~--~~~sl~~~~~-~~~~I~~~S~SK~~~~pGlRiG~i-- 255 (433)
T PRK06855 181 DNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGK--KTVPLSEVIG-DVPGIALKGISKELPWPGSRCGWI-- 255 (433)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCCCHHHHcC-cCCeEEEecCccccCCCcceEEEE--
Confidence 99999999999999999999999999999999999988642 2233333322 235799999999999999999999
Q ss_pred eecCh---hhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 015435 268 VCKTE---DVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGD 344 (407)
Q Consensus 268 v~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 344 (407)
+++++ .....+.+.+..... ...+++.+.|.++..++++.. +.+++++.++.++++++.+.+.|++.+.
T Consensus 256 i~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~----~~~~~~~~~~~~~~r~~~~~~~L~~~~~--- 327 (433)
T PRK06855 256 EVYNADKDEVFKKYINSILNAKM-IEVCSTTLPQMAIPRIMSHPE----YKNYLKERNKRYEKRSNIAYEKLKDVPG--- 327 (433)
T ss_pred EEeCCchhhHHHHHHHHHHHhhc-cccCCChHHHHHHHHhhcCCc----HHHHHHHHHHHHHHHHHHHHHHHhcCCC---
Confidence 56431 111223333332222 233677889999999998753 3467888999999999999999987632
Q ss_pred cccccCCceeEEecCCCH--------------------------------HHHHHhHhhccEEEcCCC---------eEE
Q 015435 345 WSHIIKQIGMFTFTGLNS--------------------------------EQVAFMTKEYHIYMTSDG---------RIS 383 (407)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~l~~~gi~~~~gg---------Ris 383 (407)
+.+..|.||||.|+.+.. +++..+++++||.+.||. ||+
T Consensus 328 ~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls 407 (433)
T PRK06855 328 LKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVT 407 (433)
T ss_pred eeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEE
Confidence 677889999999986632 345577888999999982 999
Q ss_pred ecCCCCCChhHHHHHHHHHHHh
Q 015435 384 MAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 384 ~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
++..+++++++++++|++++++
T Consensus 408 ~~~~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 408 LLERDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred ECCCcHHHHHHHHHHHHHHHHH
Confidence 9976889999999999999875
No 19
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=5e-46 Score=355.67 Aligned_cols=367 Identities=17% Similarity=0.203 Sum_probs=278.4
Q ss_pred ccccccCCCCCchhhhhHhhh--hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHH
Q 015435 6 VFGKIVRAPEDPILGVTVAYN--KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKL 83 (407)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ 83 (407)
-|+|+....++.+..+..... ++.+.+.|||+.|.+ .. +.+....+++.+.+. .....+|++..|.+++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p---~~-~~~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lr~a 76 (405)
T PRK09148 3 EFHRIRRLPPYVFEQVNRLKAAARAAGADIIDLGMGNP---DL-PTPQHIVDKLCETAQ--DPRTHRYSASKGIPGLRRA 76 (405)
T ss_pred chhhhhcCCccHHHHHHHHHHHHHhcCCCeEEcCCCCC---CC-CCCHHHHHHHHHHHc--CcccCCCCCCCCCHHHHHH
Confidence 356666666665554433332 234578999999975 32 335566666555543 2345789999999999999
Q ss_pred HHHHHhCCCCCCCCCC-ceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCC
Q 015435 84 SAKLILGADSPAIKDN-RVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRG 162 (407)
Q Consensus 84 ~a~~~~~~~~~~~~~~-~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ 162 (407)
+++++....+..++++ +|++ |+|+++++.+++. ..+.+||+|++++|+|+.+...++..|.+++.+++..+..
T Consensus 77 ia~~~~~~~g~~~~~~~~I~i--t~G~~~al~~~~~--~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~-- 150 (405)
T PRK09148 77 QAAYYARRFGVKLNPDTQVVA--TLGSKEGFANMAQ--AITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEE-- 150 (405)
T ss_pred HHHHHHHHhCCCCCCCCcEEE--cCChHHHHHHHHH--HhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCC--
Confidence 9999954445556666 8999 9999999999953 4478999999999999999999999999999999843322
Q ss_pred cChhhHHHHHHcC-CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHc
Q 015435 163 LNFQGLLEDLRAA-PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVAD 241 (407)
Q Consensus 163 ~d~~~l~~~i~~~-~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~ 241 (407)
.++++++.+... ++++++++ ++||||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+...
T Consensus 151 -~~~~l~~~~~~~~~~~~~v~l-~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~--~~~s~~~~~~~ 226 (405)
T PRK09148 151 -FFPALERAVRHSIPKPIALIV-NYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGN--PPPSVLQVPGA 226 (405)
T ss_pred -CccCHHHHHhhccccceEEEE-eCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCC--CCCChhhCCCc
Confidence 344555555422 44566665 89999999999999999999999999999999999999987542 12223222222
Q ss_pred CCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHH
Q 015435 242 GGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAM 321 (407)
Q Consensus 242 ~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 321 (407)
.+.+++++||||.|++||+|+||+ +++ + .+.+.+...+.....+++.+.|.++..++++.+ +++++.
T Consensus 227 ~~~~i~~~SfSK~~~~pGlR~G~~--v~~-~----~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~~------~~~~~~ 293 (405)
T PRK09148 227 KDVTVEFTSMSKTFSMAGWRMGFA--VGN-E----RLIAALTRVKSYLDYGAFTPIQVAATAALNGPQ------DCIAEM 293 (405)
T ss_pred cCcEEEEeccccccCCcchheeee--eCC-H----HHHHHHHHHHHHhccCCChHHHHHHHHHHhCcH------HHHHHH
Confidence 356788999999999999999999 554 4 455555555544455778889999999997542 567888
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCC--------HHHHHHhHhhccEEEcCCC----------eEE
Q 015435 322 ADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN--------SEQVAFMTKEYHIYMTSDG----------RIS 383 (407)
Q Consensus 322 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~gi~~~~gg----------Ris 383 (407)
++.++++++++.+.|+..+ +.+..|.+|+|.|+.+. .++...+++++||.+.||. ||+
T Consensus 294 ~~~~~~~r~~l~~~L~~~~----~~~~~p~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~ 369 (405)
T PRK09148 294 RELYKKRRDVLVESFGRAG----WDIPPPAASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIA 369 (405)
T ss_pred HHHHHHHHHHHHHHHHHcC----CccCCCCeeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEE
Confidence 8999999999999999876 66677899999998652 2445667778999999862 999
Q ss_pred ecCCCCCChhHHHHHHHHHHHhh
Q 015435 384 MAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 384 ~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
++. +.+.+..++++|.++++++
T Consensus 370 ~~~-~~~~l~~al~~l~~~l~~~ 391 (405)
T PRK09148 370 LVE-NEQRIRQAARNIKRFLSSA 391 (405)
T ss_pred ecC-CHHHHHHHHHHHHHHHHHH
Confidence 984 7899999999999998764
No 20
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.7e-46 Score=355.00 Aligned_cols=346 Identities=15% Similarity=0.169 Sum_probs=271.4
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCC-CceEEeecCC
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKD-NRVTTVQCLS 108 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~-~~i~~~~t~g 108 (407)
..+.|+|+.|.+ +..+.++.+.+++.+.+. .....+|++..|.+++|+++++++....+..+++ ++|++ |+|
T Consensus 38 ~~~~i~l~~g~~---~~~~p~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~i--t~G 110 (405)
T PRK06207 38 PGRPVDFSHGDV---DAHEPTPGAFELFSAGVE--RGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELII--TPG 110 (405)
T ss_pred CCCceecCCcCC---CCCCCCHHHHHHHHHHHh--cCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEE--eCC
Confidence 468899999986 321334556666666654 2234679889999999999999996655655677 89999 999
Q ss_pred cccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeec---CCCCCcChhhHHHHHHcCCCCcEEEEec
Q 015435 109 GTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYD---PATRGLNFQGLLEDLRAAPSGAIVLLHA 185 (407)
Q Consensus 109 ~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~---~~~~~~d~~~l~~~i~~~~~~~~v~i~~ 185 (407)
+++++.+++ ...+.+||+|++++|+|+.+...++..|.+++.++++. +.++++|++++++.+. ++++++++ +
T Consensus 111 a~~al~~~~--~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~--~~~k~v~l-~ 185 (405)
T PRK06207 111 TQGALFLAV--AATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFK--AGVRVFLF-S 185 (405)
T ss_pred cHHHHHHHH--HHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhh--hcCeEEEE-C
Confidence 999999985 44478999999999999999999999999999999841 2357899999999887 45666666 9
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCccee
Q 015435 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGAL 265 (407)
Q Consensus 186 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 265 (407)
+||||||.+++.+++++|+++|++||++||+||+|.++.+++.. ..++..+....+++++++||||.|+++|+|+||+
T Consensus 186 ~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~--~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~i 263 (405)
T PRK06207 186 NPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTS--YTHLRALPIDPENVITIMGPSKTESLSGYRLGVA 263 (405)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC--CCchhcCCCCcCcEEEEecchhhccCcccceEEE
Confidence 99999999999999999999999999999999999999886421 1222222223578999999999999999999999
Q ss_pred EEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 015435 266 SIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDW 345 (407)
Q Consensus 266 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 345 (407)
+++ + .+.+.+.........+.+.+.|.++..++++.. .++++.+++++++++.+.+.|++.+. +
T Consensus 264 --i~~-~----~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~------~~~~~~~~~~~~~r~~l~~~L~~~~~---~ 327 (405)
T PRK06207 264 --FGS-P----AIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPD------GWMKDRIARHQAIRDDLLRVLRGVEG---V 327 (405)
T ss_pred --EcC-H----HHHHHHHHHHhHhccCCCHHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHHhcCCC---c
Confidence 555 4 455555555544555677788999998887542 23455666777889999999987632 6
Q ss_pred ccccCCceeEEecCCC-----HH-HHHHhHhhccEEEcCCC----------eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 346 SHIIKQIGMFTFTGLN-----SE-QVAFMTKEYHIYMTSDG----------RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 346 ~~~~~~~~~~~~~~~~-----~~-~~~~~l~~~gi~~~~gg----------Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
.+..|.+|+|.|+.+. .+ +...+++++||.+.||. ||+++. +++++++++++|++++++.
T Consensus 328 ~~~~p~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~-~~~~l~~al~rl~~~l~~~ 403 (405)
T PRK06207 328 FVRAPQAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ-DHAAAVAAAERIAQLIERY 403 (405)
T ss_pred eecCCCeeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 7778899999999763 33 45566667899999962 999996 7899999999999998764
No 21
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=5.4e-46 Score=354.39 Aligned_cols=361 Identities=16% Similarity=0.184 Sum_probs=272.1
Q ss_pred ccccCCCCCchhhhhHhhh--hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHH
Q 015435 8 GKIVRAPEDPILGVTVAYN--KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSA 85 (407)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a 85 (407)
+++.......+....+.+. ...+.++|+|+.|.| +. +.++.+.+.+...+. .....+|+|..|.++||++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p---~~-~~~~~~~~~~~~~~~--~~~~~~Y~~~~g~~~lr~aia 80 (389)
T PRK08068 7 ELLKQLPKQFFASLVAKVNKKVAEGHDVINLGQGNP---DQ-PTPEHIVEALQEAAE--NPANHKYSPFRGYPFLKEAAA 80 (389)
T ss_pred hHhhhcCccHHHHHHHHHHHHHhcCCCeEEecCCCC---CC-CCCHHHHHHHHHHHh--CCCCCCCCCCCCCHHHHHHHH
Confidence 4454545555544444332 223468999999975 43 444445555545543 334567988999999999999
Q ss_pred HHHhCCCCCCCCCC-ceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcC
Q 015435 86 KLILGADSPAIKDN-RVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLN 164 (407)
Q Consensus 86 ~~~~~~~~~~~~~~-~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 164 (407)
+++....+..++++ +|++ |+|+++++..++ ...+.+||+|++++|+|..+...++..|++++.+|++++.++.+|
T Consensus 81 ~~~~~~~g~~~~~~~~i~i--t~G~~~~l~~~~--~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d 156 (389)
T PRK08068 81 DFYKREYGVTLDPETEVAI--LFGGKAGLVELP--QCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPD 156 (389)
T ss_pred HHHHHHhCCCCCCCccEEE--cCCcHHHHHHHH--HHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCC
Confidence 99965455556677 8999 999999999884 444789999999999999999999999999999999534457789
Q ss_pred hhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCc
Q 015435 165 FQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGE 244 (407)
Q Consensus 165 ~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~ 244 (407)
++++++.+. ++++++++ ++||||||++++.+++++|+++|++|+++||+||+|.++.+++. ...+........++
T Consensus 157 ~~~l~~~~~--~~~~~v~l-~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~--~~~s~~~~~~~~~~ 231 (389)
T PRK08068 157 YTKIPEEVA--EKAKLMYL-NYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQ--KPVSFLQTPGAKDV 231 (389)
T ss_pred HHHHHHhcc--ccceEEEE-ECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCC--CCcChhhCCCccCC
Confidence 999998886 45667666 89999999999999999999999999999999999998887531 12222222223457
Q ss_pred EEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHH
Q 015435 245 CLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADR 324 (407)
Q Consensus 245 ~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (407)
+++++||||.||++|+|+||+ +++ ++ +.+.+.........+.+...|.++..++.+.. +++++++++
T Consensus 232 ~i~~~S~SK~~g~~GlRiG~~--~~~-~~----l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~ 298 (389)
T PRK08068 232 GIELYTLSKTFNMAGWRVAFA--VGN-ES----VIEAINLLQDHLFVSLFGAIQDAAIEALLSDQ------SCVAELVAR 298 (389)
T ss_pred EEEEecchhccCCccceeEeE--ecC-HH----HHHHHHHHHhhccCCCChHHHHHHHHHHhCcH------HHHHHHHHH
Confidence 899999999999999999999 454 44 44445445444444666667887777775432 557788899
Q ss_pred HHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCC----CHHH-HHHhHhhccEEEcCCC----------eEEecCCCC
Q 015435 325 IISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL----NSEQ-VAFMTKEYHIYMTSDG----------RISMAGLSS 389 (407)
Q Consensus 325 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~l~~~gi~~~~gg----------Ris~~~~~~ 389 (407)
++++++++.+.|++.+ +.+..+.+|+|.|+.+ +.+. ...+++++||.+.||. ||+++. ++
T Consensus 299 ~~~~r~~~~~~L~~~g----~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~ 373 (389)
T PRK08068 299 YESRRNAFISACREIG----WEVDAPKGSFFAWMPVPKGYTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLT-DE 373 (389)
T ss_pred HHHHHHHHHHHHHHCC----CcccCCCeeEEEEEECCCCCCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcC-CH
Confidence 9999999999999887 6777889999999855 3444 4566666899998851 999985 66
Q ss_pred CChhHHHHHHHH
Q 015435 390 KTVPHLTDAIHA 401 (407)
Q Consensus 390 e~i~~~~~~l~~ 401 (407)
+.+..++++|++
T Consensus 374 ~~l~~al~~l~~ 385 (389)
T PRK08068 374 ERLREAVERIGK 385 (389)
T ss_pred HHHHHHHHHHHH
Confidence 777888877765
No 22
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=1.2e-45 Score=353.58 Aligned_cols=365 Identities=15% Similarity=0.134 Sum_probs=282.2
Q ss_pred chhhhhHhhh-hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCC
Q 015435 17 PILGVTVAYN-KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPA 95 (407)
Q Consensus 17 ~~~~~~~~~~-~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~ 95 (407)
+.+..+..+. +.++.++|+|++|.|......+.|+...+++.+.+. .....+|++..|.+++|+++++++...++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~ 93 (409)
T PLN02656 16 ILSLLMESIDDEENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQ--SNKFNGYAPTVGLPQARRAIAEYLSRDLPYK 93 (409)
T ss_pred HHHHHHHhccccccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHh--cCCCCCCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 3445554442 456789999999987110112556666666666665 3345679999999999999999996655666
Q ss_pred CCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC
Q 015435 96 IKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA 175 (407)
Q Consensus 96 ~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 175 (407)
+++++|++ |+|+++++.+++. ..+.+||+|++++|+|+.+.......|++++.+++..++++.+|++++++.+.
T Consensus 94 ~~~~~i~~--t~G~~~al~~~~~--~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-- 167 (409)
T PLN02656 94 LSLDDVFI--TSGCTQAIDVALS--MLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALAD-- 167 (409)
T ss_pred CCcccEEE--eCChHHHHHHHHH--HHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhc--
Confidence 78899999 9999999999853 34789999999999999999999999999999998534567899999999886
Q ss_pred CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccc
Q 015435 176 PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNM 255 (407)
Q Consensus 176 ~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 255 (407)
++++++++ ++||||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+ ....++|+++||||.|
T Consensus 168 ~~~~~v~l-~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~vi~~~SfSK~f 243 (409)
T PLN02656 168 QNTVALVI-INPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSN--PFVPMGVF-GSIVPVLTLGSLSKRW 243 (409)
T ss_pred cCceEEEE-ECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCC--CcccHHHh-cccCcEEEEcccchhc
Confidence 55677666 88999999999999999999999999999999999999988642 12233222 3346799999999999
Q ss_pred cccCCCcceeEEeecChhhH---HHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHH
Q 015435 256 GLYGERVGALSIVCKTEDVA---SRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQL 332 (407)
Q Consensus 256 ~~~G~r~G~~~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 332 (407)
+++|+|+||+ ++++++.. ..++..+...... ..+++.+.|.++..++++.. ..++++.+++++++++.+
T Consensus 244 ~~pGlRiG~~--i~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~a~~~~l~~~~-----~~~~~~~~~~~~~~r~~~ 315 (409)
T PLN02656 244 IVPGWRLGWF--VTTDPSGSFRDPKIVERIKKYFDI-LGGPATFIQAAVPTILEQTD-----ESFFKKTINILKQSSDIC 315 (409)
T ss_pred cCcceeEEEE--EEeCcccccccHHHHHHHHHHHhh-hcCCCHHHHHHHHHHHhcCc-----HHHHHHHHHHHHHHHHHH
Confidence 9999999999 67532100 1233334333332 23678889999999997532 256778888999999999
Q ss_pred HHHHHhcCCCCCcc-cccCCceeEEecCCC---------H-HHHHHhHhhccEEEcCCC--------eEEecCCCCCChh
Q 015435 333 FDALSARGTPGDWS-HIIKQIGMFTFTGLN---------S-EQVAFMTKEYHIYMTSDG--------RISMAGLSSKTVP 393 (407)
Q Consensus 333 ~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~---------~-~~~~~~l~~~gi~~~~gg--------Ris~~~~~~e~i~ 393 (407)
.+.|+..+. +. +..|.+|+|.|+.++ . +++.++++++||.+.||. ||+++. ++++++
T Consensus 316 ~~~L~~~~~---~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~-~~e~l~ 391 (409)
T PLN02656 316 CDRIKEIPC---ITCPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAA-DPSSLE 391 (409)
T ss_pred HHHHhhCCC---CcCCcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCC-CHHHHH
Confidence 999988742 33 457899999998652 2 346678888999999972 999996 889999
Q ss_pred HHHHHHHHHHHh
Q 015435 394 HLTDAIHAAVTR 405 (407)
Q Consensus 394 ~~~~~l~~~l~~ 405 (407)
+++++|++++++
T Consensus 392 eal~rl~~~~~~ 403 (409)
T PLN02656 392 EALGRIKSFYLR 403 (409)
T ss_pred HHHHHHHHHHHH
Confidence 999999998864
No 23
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=7.4e-46 Score=353.04 Aligned_cols=361 Identities=16% Similarity=0.168 Sum_probs=273.5
Q ss_pred ccccCCCCCchhhhhHhhh--hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHH
Q 015435 8 GKIVRAPEDPILGVTVAYN--KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSA 85 (407)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a 85 (407)
.|+...+.+.+......+. ++.++++++|+.|.+ .. +.++.+.+++.+.+. .....+|++..|.+++|++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~-~~~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lr~~ia 77 (383)
T TIGR03540 4 DRIENLPPYLFAEIDKKKAEKKAEGVDVISLGIGDP---DL-PTPKHIVEALCKAAE--NPENHRYPSYEGMLAYRQAVA 77 (383)
T ss_pred hhhccCChhHHHHHHHHHHHHHhcCCCeEEeCCCCC---CC-CCCHHHHHHHHHHHh--CCCCCCCCCCCCCHHHHHHHH
Confidence 3444444444333333332 345679999999985 32 334455555555543 234577988999999999999
Q ss_pred HHHhCCCCCCCCCC-ceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcC
Q 015435 86 KLILGADSPAIKDN-RVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLN 164 (407)
Q Consensus 86 ~~~~~~~~~~~~~~-~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 164 (407)
+++...++..++++ +|++ |+|+++++.++. ...+.+||.|++++|+|+.+...++..|.+++.+|++++.++.+|
T Consensus 78 ~~~~~~~~~~~~~~~~vi~--t~G~~~~l~~~~--~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d 153 (383)
T TIGR03540 78 DWYKRRFGVELDPETEVLS--LIGSKEGIAHIP--LAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPD 153 (383)
T ss_pred HHHHHhhCCCCCCCCeEEE--CCCcHHHHHHHH--HHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccC
Confidence 99965445555555 6888 999999999995 334789999999999999999999999999999999544456789
Q ss_pred hhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCc
Q 015435 165 FQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGE 244 (407)
Q Consensus 165 ~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~ 244 (407)
++++++.+. ++++++++ ++||||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+....++
T Consensus 154 ~~~l~~~~~--~~~~~v~i-~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~--~~~~~~~~~~~~~~ 228 (383)
T TIGR03540 154 FDAIPEDIA--KKAKLMFI-NYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGY--KAPSFLEVDGAKDV 228 (383)
T ss_pred HHHHHhhcc--ccceEEEE-eCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCC--CCcCcccCCCcccC
Confidence 999998886 45677777 79999999999999999999999999999999999999887542 22222222222357
Q ss_pred EEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHH
Q 015435 245 CLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADR 324 (407)
Q Consensus 245 ~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (407)
+++++||||.||++|+|+||+ +++ ++ +.+.+.........+++.+.|.++..++.+.. ++++++++.
T Consensus 229 ~i~~~SfSK~~g~~GlRiG~~--i~~-~~----l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~ 295 (383)
T TIGR03540 229 GIEFHSLSKTYNMTGWRIGMA--VGN-AD----LIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQ------DVVKEIRKI 295 (383)
T ss_pred EEEEEecccccCCccceeeEE--eCC-HH----HHHHHHHHHHhcccCCChHHHHHHHHHHhCCH------HHHHHHHHH
Confidence 899999999999999999999 454 44 44444444433444667788898888887653 567788899
Q ss_pred HHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCC----H-HHHHHhHhhccEEEcCC--------C--eEEecCCCC
Q 015435 325 IISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN----S-EQVAFMTKEYHIYMTSD--------G--RISMAGLSS 389 (407)
Q Consensus 325 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~l~~~gi~~~~g--------g--Ris~~~~~~ 389 (407)
++++++.+.+.|++.+ +.+..+.+|+|.|+.+. . +++..+++++||.+.|| + ||+++. ++
T Consensus 296 ~~~~~~~~~~~L~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~ 370 (383)
T TIGR03540 296 YQRRRDLLLEALKKIG----IDVEKPKATFYVWVPVPEGYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTV-PD 370 (383)
T ss_pred HHHHHHHHHHHHHhCC----CEecCCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecC-CH
Confidence 9999999999999886 77778889999998652 3 44567777899999986 1 999985 77
Q ss_pred CChhHHHHHHHH
Q 015435 390 KTVPHLTDAIHA 401 (407)
Q Consensus 390 e~i~~~~~~l~~ 401 (407)
++++.++++|++
T Consensus 371 ~~l~~~l~~l~~ 382 (383)
T TIGR03540 371 ERLEEAVARIKK 382 (383)
T ss_pred HHHHHHHHHHhh
Confidence 778888877764
No 24
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=1.4e-45 Score=352.44 Aligned_cols=362 Identities=13% Similarity=0.128 Sum_probs=275.6
Q ss_pred ccccCCCCCchhhhhHhhh---hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHH
Q 015435 8 GKIVRAPEDPILGVTVAYN---KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLS 84 (407)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~---~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~ 84 (407)
+++.+.+++.+..+...++ +..+.++|+|+.|.+ +. +.++...+++.+.+. ...+|++..|.+++|+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p---~~-~~~~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~~i 74 (396)
T PRK09147 3 PRLDRLQPYPFEKLRALFAGVTPPADLPPISLSIGEP---KH-PTPAFIKDALAANLD----GLASYPTTAGLPALREAI 74 (396)
T ss_pred chhhcCCcchHHHHHHHHHhhhhccCCCeEecCCCCC---CC-CCCHHHHHHHHHHhh----hhcCCCCCCCCHHHHHHH
Confidence 3555566666655555443 345789999999986 33 334444444433332 357798899999999999
Q ss_pred HHHHhCCCCCC-CCCC-ceEEeecCCcccHHHHHHHHHHhhcC---CCeEEecCCCCCChHHHHhhcCceeeEEEeecCC
Q 015435 85 AKLILGADSPA-IKDN-RVTTVQCLSGTGSLRVGAEFLARHYH---QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPA 159 (407)
Q Consensus 85 a~~~~~~~~~~-~~~~-~i~~~~t~g~t~a~~~~~~~~~~~~~---gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~ 159 (407)
++++...++.. ++++ +|++ |+|+++++.++. ...+.+ ||.|++++|+|..+...++..|++++.+|++.+.
T Consensus 75 a~~~~~~~g~~~~~~~~~i~i--t~G~~~al~~~~--~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~ 150 (396)
T PRK09147 75 AAWLERRYGLPALDPATQVLP--VNGSREALFAFA--QTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPAN 150 (396)
T ss_pred HHHHHHHhCCCcCCccceEEE--CCChHHHHHHHH--HHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccc
Confidence 99996555655 6664 8999 999999999985 344678 8999999999999999999999999999995444
Q ss_pred CCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHH
Q 015435 160 TRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFV 239 (407)
Q Consensus 160 ~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~ 239 (407)
++++|++++++.+. ++++++++ ++||||||.+++.+++++|+++|++|+++||+||+|.++.+++............
T Consensus 151 ~~~~d~~~l~~~~~--~~~k~i~l-~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 227 (396)
T PRK09147 151 NFAPDFDAVPAEVW--ARTQLLFV-CSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAA 227 (396)
T ss_pred cCccCHHHHHHHHh--hccEEEEE-cCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhcc
Confidence 57899999998876 45677776 8999999999999999999999999999999999999998764211111111111
Q ss_pred ----HcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHH
Q 015435 240 ----ADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWT 315 (407)
Q Consensus 240 ----~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 315 (407)
...+++++++||||.|+++|+|+||+ +++ ++ +.+.+.........+++.+.|.++...+.+.
T Consensus 228 ~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~--~~~-~~----l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~------- 293 (396)
T PRK09147 228 ELGRDDFKRLVVFHSLSKRSNVPGLRSGFV--AGD-AA----LLKKFLLYRTYHGCAMPPAVQAASIAAWNDE------- 293 (396)
T ss_pred ccCccccccEEEEeccccccCCccceeeee--cCC-HH----HHHHHHHHhhhcccCCCHHHHHHHHHHhcch-------
Confidence 12368999999999999999999999 565 44 4444444443334467778888877777543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCC---HHHHHHhHhhccEEEcCC-------------
Q 015435 316 LELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN---SEQVAFMTKEYHIYMTSD------------- 379 (407)
Q Consensus 316 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gi~~~~g------------- 379 (407)
+++.+.++.++++++.+.+.|++. +.+..|.+|+|.|+.+. .+++..+++++||.+.||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~L~~~-----~~~~~p~~g~f~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~ 368 (396)
T PRK09147 294 AHVRENRALYREKFDAVTPILAPV-----LDVQLPDAGFYLWAKVPGDDTEFARRLYADYNVTVLPGSYLAREAHGVNPG 368 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHh-----cCCCCCCeeEEEEEECCCCHHHHHHHHHHhCCEEEeCCccccccccCCCCC
Confidence 457788899999999999998763 35567889999999763 345667777789999774
Q ss_pred -C--eEEecCCCCCChhHHHHHHHHHHH
Q 015435 380 -G--RISMAGLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 380 -g--Ris~~~~~~e~i~~~~~~l~~~l~ 404 (407)
+ ||+++. +++++++++++|+++++
T Consensus 369 ~~~iRi~~~~-~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 369 AGRVRIALVA-PLAECVEAAERIVDFCR 395 (396)
T ss_pred CCeEEEEecC-CHHHHHHHHHHHHHHhc
Confidence 1 999986 78899999999998774
No 25
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=8.5e-46 Score=352.00 Aligned_cols=341 Identities=16% Similarity=0.163 Sum_probs=270.9
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCC-ceEEeecCCc
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDN-RVTTVQCLSG 109 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~-~i~~~~t~g~ 109 (407)
++.|+|+.|.+ +. +.+....+++.+.+. ....+|.+..|.+++|+++++++....+..++++ +|++ |+|+
T Consensus 20 ~~~i~l~~~~~---~~-~~~~~~~~~~~~~~~---~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~--t~G~ 90 (378)
T PRK07682 20 EGVISLGVGEP---DF-VTPWNVREASIRSLE---QGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIV--TVGA 90 (378)
T ss_pred CCeEEeCCCCC---CC-CCCHHHHHHHHHHHh---cCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCCh
Confidence 57899999986 22 333344455544443 2356798889999999999999965445556665 7999 9999
Q ss_pred ccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCC
Q 015435 110 TGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHN 189 (407)
Q Consensus 110 t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~N 189 (407)
++++.+++ ...+.+||+|++++|+|+.+...++..|.+++.++...++++++|++++++++. ++++++++ ++|||
T Consensus 91 ~~al~~~~--~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--~~~~~v~~-~~p~N 165 (378)
T PRK07682 91 SQALDVAM--RAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAIT--AKTKAILL-CSPNN 165 (378)
T ss_pred HHHHHHHH--HHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcC--cccEEEEE-ECCCC
Confidence 99999985 444789999999999999999999999999999987433457899999999886 45667666 89999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEee
Q 015435 190 PTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVC 269 (407)
Q Consensus 190 PtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~ 269 (407)
|||.+++.+++++|+++|++|++++|+||+|.++.+++. ..++..+....+++++++||||.|+++|+|+||+ ++
T Consensus 166 PtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~---~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~--~~ 240 (378)
T PRK07682 166 PTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEA---YTSFASIKGMRERTILISGFSKGFAMTGWRLGFI--AA 240 (378)
T ss_pred CcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCC---CCChhhcccccCCEEEEecCcccccChhhhhhhh--hc
Confidence 999999999999999999999999999999999998642 2223333333468999999999999999999999 45
Q ss_pred cChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc
Q 015435 270 KTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHII 349 (407)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 349 (407)
+ ++ +.+.+.........+++.+.|.++..+|++.. .++++++++++++++++.+.|++.+ +.+..
T Consensus 241 ~-~~----~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~L~~~~----~~~~~ 305 (378)
T PRK07682 241 P-VY----FSEAMLKIHQYSMMCAPTMAQFAALEALRAGN------DDVIRMRDSYRKRRNFFVTSFNEIG----LTCHV 305 (378)
T ss_pred C-HH----HHHHHHHHHHhhccCCCHHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHHHHHHCC----CccCC
Confidence 5 44 44444444444445778889999999998653 3467888999999999999999887 67788
Q ss_pred CCceeEEecCC-----CHH-HHHHhHhhccEEEcCCC----------eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 350 KQIGMFTFTGL-----NSE-QVAFMTKEYHIYMTSDG----------RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 350 ~~~~~~~~~~~-----~~~-~~~~~l~~~gi~~~~gg----------Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
|.+++|.|+.+ +.+ +...+++++||.+.||. ||+++. +++++++++++|+++++++
T Consensus 306 p~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 306 PGGAFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT-SLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred CCeeEEEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHhhc
Confidence 89999999843 344 45566777899999861 999997 7899999999999999875
No 26
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=2.2e-45 Score=352.63 Aligned_cols=353 Identities=14% Similarity=0.169 Sum_probs=277.4
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCc
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSG 109 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~ 109 (407)
+.++|+|++|.|..--..+.++++.+++.+.+. ......|++..|.+++|+++++++...++..+++++|++ |+|+
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~--~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~i--t~G~ 126 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALR--SGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYL--TAGC 126 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHH--cCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEE--eCCH
Confidence 679999999986110012445666666666664 333457988899999999999999666666778899999 9999
Q ss_pred ccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCC
Q 015435 110 TGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHN 189 (407)
Q Consensus 110 t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~N 189 (407)
++++.+++.. .+.+||+|++++|+|+.|.......|++++.+++..+.++.+|++.+++.++ ++++++++ ++|||
T Consensus 127 ~~al~l~~~~--l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--~~~~~i~i-~~P~N 201 (430)
T PLN00145 127 AQAIEIIMSV--LAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALAD--ENTVAMVI-INPNN 201 (430)
T ss_pred HHHHHHHHHH--hcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhC--cCceEEEE-eCCCC
Confidence 9999999543 3679999999999999999999999999999997545568899999999887 56777777 89999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEee
Q 015435 190 PTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVC 269 (407)
Q Consensus 190 PtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~ 269 (407)
|||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+ ....++++++||||.|++||+|+||+ ++
T Consensus 202 PtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~--~~~~~~~~-~~~~~vi~~~S~SK~~~~pG~RlG~i--v~ 276 (430)
T PLN00145 202 PCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSK--PFVPMGVF-GEVAPVLTLGSISKRWVVPGWRLGWI--AT 276 (430)
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCC--Cccchhhh-cccCcEEEEeccccccCCCCeeEEEE--EE
Confidence 999999999999999999999999999999999988642 22333333 23568999999999999999999999 56
Q ss_pred cCh-hhHHH--HHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 015435 270 KTE-DVASR--VESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWS 346 (407)
Q Consensus 270 ~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 346 (407)
+++ .+.+. +...+.... ....+++.+.|.++..++++.. .+++++.++.++++++.+.+.|++.+. +.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Q~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~L~~~~g---~~ 347 (430)
T PLN00145 277 CDPNGILKETKVVDSIRNYL-NISTDPATFVQGAIPQIIANTK-----EEFFTKTLGLLKETADICYEKIKEIKC---IT 347 (430)
T ss_pred ecchhhhhhhHHHHHHHHHh-cccCCCCHHHHHHHHHHHhcCH-----HHHHHHHHHHHHHHHHHHHHHHhcCCC---CC
Confidence 433 22221 233333333 2333678889999998887531 256778889999999999999988632 55
Q ss_pred c-ccCCceeEEecCCC----------HHHHHHhHhhccEEEcCCC--------eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 347 H-IIKQIGMFTFTGLN----------SEQVAFMTKEYHIYMTSDG--------RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 347 ~-~~~~~~~~~~~~~~----------~~~~~~~l~~~gi~~~~gg--------Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
. ..|.+++|+|+.++ .+++.++++++||.+.||. ||+++. ++++++.++++|++++++.
T Consensus 348 ~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~-~~~~l~~al~rl~~~~~~~ 425 (430)
T PLN00145 348 CPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAI-DPPSLEDGLERLKSFCLRH 425 (430)
T ss_pred CCcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHHh
Confidence 4 47899999998653 2456788888999999972 999995 8888999999999998753
No 27
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-45 Score=351.59 Aligned_cols=341 Identities=17% Similarity=0.205 Sum_probs=266.3
Q ss_pred CCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCC-ceEEeecC
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDN-RVTTVQCL 107 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~-~i~~~~t~ 107 (407)
.+.++|+|+.|.| .. +.|....+++...+. ......|+++.|.++||+++++++....+..++++ +|++ |+
T Consensus 33 ~g~~~i~l~~g~p---~~-~~p~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~v--t~ 104 (394)
T PRK05942 33 QGLDLIDLGMGNP---DG-AAPQPVIEAAIAALA--DPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALP--LL 104 (394)
T ss_pred cCCCeEEcCCCCC---CC-CCCHHHHHHHHHHHh--CCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEE--cc
Confidence 4567999999975 44 445567777766664 23457798899999999999999965445556667 5888 99
Q ss_pred CcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCC
Q 015435 108 SGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACA 187 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p 187 (407)
|+++++.+++ ...+.+||+|++++|+|+.+...+...|++++.++++.+.++.+|++++++.+. ++++++++ ++|
T Consensus 105 G~~~al~~~~--~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~--~~~k~i~l-~~P 179 (394)
T PRK05942 105 GSKEGLTHLA--LAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVA--QQAKILYF-NYP 179 (394)
T ss_pred ChHHHHHHHH--HHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhcc--ccceEEEE-cCC
Confidence 9999999985 444789999999999999999999999999999998434456799999999886 56777777 799
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEE
Q 015435 188 HNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSI 267 (407)
Q Consensus 188 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 267 (407)
|||||.+++.+++++|+++|++||+++|+||+|.++.+++.. ..++..+....+.+++++||||.|+++|+|+||+
T Consensus 180 ~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~--~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i-- 255 (394)
T PRK05942 180 SNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQ--PTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFV-- 255 (394)
T ss_pred CCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCC--CCChhhCCCccccEEEEecchhccCChhhheeee--
Confidence 999999999999999999999999999999999999875421 2223222222356789999999999999999999
Q ss_pred eecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Q 015435 268 VCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSH 347 (407)
Q Consensus 268 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 347 (407)
+++ ++ +.+.+.........+++...|.++..+++..+ +++++.+++++++++++.+.|++.+ +.+
T Consensus 256 ~~~-~~----l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~L~~~~----~~~ 320 (394)
T PRK05942 256 VGN-RH----IIQGLRTLKTNLDYGIFSALQKAAETALQLPD------SYLQQVQERYRTRRDFLIQGLGELG----WNI 320 (394)
T ss_pred ecC-HH----HHHHHHHHHhhcccCCCHHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHHHHCC----Cee
Confidence 455 44 44555544443344677788888888886432 5677888999999999999998876 677
Q ss_pred ccCCceeEEecCC----C-HHHHHHhHhhccEEEcCCC----------eEEecCCCCCChhHHHHHHHHH
Q 015435 348 IIKQIGMFTFTGL----N-SEQVAFMTKEYHIYMTSDG----------RISMAGLSSKTVPHLTDAIHAA 402 (407)
Q Consensus 348 ~~~~~~~~~~~~~----~-~~~~~~~l~~~gi~~~~gg----------Ris~~~~~~e~i~~~~~~l~~~ 402 (407)
..+.+++|.|+.+ + .+++.++++++||.+.||. ||+++. +.+.+..++++|+++
T Consensus 321 ~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 321 PPTKATMYLWVPCPVGMGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIA-DCDRLGEALDRLKQA 389 (394)
T ss_pred cCCCeeeEEEEECCCCCCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHHh
Confidence 7888999999865 2 3446678888999998851 999974 556666666666553
No 28
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-45 Score=351.15 Aligned_cols=363 Identities=14% Similarity=0.159 Sum_probs=272.6
Q ss_pred ccccccCCCCCchhhhhHhhh--hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHH
Q 015435 6 VFGKIVRAPEDPILGVTVAYN--KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKL 83 (407)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ 83 (407)
|.+++....++.........+ ...+.++++|+.|.+ .. +.++.+.+++.+.+. ......|++..|.+++|++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~---~~-~~~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lr~a 77 (385)
T PRK09276 4 LADRIKNLPPYLFAEIDKKKAEKIARGVDVISLGIGDP---DL-PTPDHIIEAMCKAVE--DPENHQYPSYEGMLEFRKA 77 (385)
T ss_pred hhhHhhhCCccHHHHHHHHHHHHHhcCCCEEEecCCCC---CC-CCCHHHHHHHHHHHh--CCCCCCCCCCCCcHHHHHH
Confidence 445555555444433333222 134578999999975 32 334444444444443 2335679888999999999
Q ss_pred HHHHHhCCCCCCCCCC-ceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCC
Q 015435 84 SAKLILGADSPAIKDN-RVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRG 162 (407)
Q Consensus 84 ~a~~~~~~~~~~~~~~-~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ 162 (407)
+++++...++..++++ +|++ |+|+++++.++.. ..+.+||+|++++|+|+.+...++..|.+++.++++++.++.
T Consensus 78 ia~~~~~~~g~~~~~~~~ii~--t~G~~~~i~~~~~--~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~ 153 (385)
T PRK09276 78 VADWYKRRFGVELDPETEVIS--LIGSKEGIAHIPL--AFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFL 153 (385)
T ss_pred HHHHHHHHhCCCCCCCCcEEE--ccCcHHHHHHHHH--HhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCc
Confidence 9999965445555666 5888 9999999999853 347899999999999999999999999999999985444567
Q ss_pred cChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcC
Q 015435 163 LNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADG 242 (407)
Q Consensus 163 ~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~ 242 (407)
+|++++++.+. ++++++++ ++||||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+....
T Consensus 154 ~d~~~l~~~~~--~~~~~v~l-~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~ 228 (385)
T PRK09276 154 PDLDAIPEDVA--KKAKLMFI-NYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGY--KPPSFLEVPGAK 228 (385)
T ss_pred CCHHHHHHhcc--ccceEEEE-eCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCC--CCCChhccCCCc
Confidence 89999988876 45677777 79999999999999999999999999999999999999987542 122332222224
Q ss_pred CcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHH
Q 015435 243 GECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMA 322 (407)
Q Consensus 243 ~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 322 (407)
+++++++||||.||++|+|+||+ +++ +++ .+.+.........+++.+.|.++..++.+.. .++++.+
T Consensus 229 ~~~i~~~S~SK~~g~~GlRiG~~--i~~-~~l----~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~ 295 (385)
T PRK09276 229 DVGIEFHSLSKTYNMTGWRIGFA--VGN-ADL----IAGLGKVKSNVDSGVFQAIQEAGIAALNGPQ------EVVEELR 295 (385)
T ss_pred CCEEEEecchhhcCCcchhheee--eCC-HHH----HHHHHHHHhhccCCCCHHHHHHHHHHHcCcH------HHHHHHH
Confidence 57899999999999999999999 554 444 4444444433444566778888888887532 5677888
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCC----CHH-HHHHhHhhccEEEcCC--------C--eEEecCC
Q 015435 323 DRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL----NSE-QVAFMTKEYHIYMTSD--------G--RISMAGL 387 (407)
Q Consensus 323 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~l~~~gi~~~~g--------g--Ris~~~~ 387 (407)
++++++++.+.+.|++.+ +.+..+.+|+|.|+.+ +.. ++.++++++||.+.|| + ||+++.
T Consensus 296 ~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~v~~~~~~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~- 370 (385)
T PRK09276 296 KIYQERRDILVEGLRKLG----LEVEPPKATFYVWAPVPKGYTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTV- 370 (385)
T ss_pred HHHHHHHHHHHHHHHhCC----CcccCCCcceEEEEECCCCCCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCC-
Confidence 999999999999999876 6777888999999865 333 4567777789999996 1 999985
Q ss_pred CCCChhHHHHHHHH
Q 015435 388 SSKTVPHLTDAIHA 401 (407)
Q Consensus 388 ~~e~i~~~~~~l~~ 401 (407)
+++++..++++|++
T Consensus 371 ~~~~l~~~l~~l~~ 384 (385)
T PRK09276 371 PDERIEEAVERIKK 384 (385)
T ss_pred CHHHHHHHHHHHhh
Confidence 77788888887764
No 29
>PLN02231 alanine transaminase
Probab=100.00 E-value=5.4e-45 Score=355.43 Aligned_cols=354 Identities=17% Similarity=0.184 Sum_probs=275.5
Q ss_pred CCCCeeeeeeeeeecCCCccccchhHHHHHHHHhcc-ccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVND-QSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
..+++|+|+.|.+ ..|..+++++.+.+.+. .....+|+++.|.+++|+++++++...++..+++++|++ |+
T Consensus 127 ~~p~~i~~~~~~~------~fp~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~i--T~ 198 (534)
T PLN02231 127 DHPSLLDKSETHG------LFSADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFL--TD 198 (534)
T ss_pred cCCccCCCCCccc------cCCHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEE--eC
Confidence 3468899985542 33568888887766522 124677999999999999999999776777888999999 99
Q ss_pred CcccHHHHHHHHHHhh-cCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCC----CCcEEE
Q 015435 108 SGTGSLRVGAEFLARH-YHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAP----SGAIVL 182 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~-~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~----~~~~v~ 182 (407)
|+++++.+++.++ + .+||.|+++.|+|+.|...+...|.+++.++++.++++++|++++++.+.+.. ++++++
T Consensus 199 Ga~~ai~~~~~~l--~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~iv 276 (534)
T PLN02231 199 GASPAVHMMMQLL--IRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALV 276 (534)
T ss_pred CHHHHHHHHHHHh--ccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEE
Confidence 9999999995333 5 37999999999999999999999999999999544568999999999986421 345666
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHH------cCCcEEEEEecCccc-
Q 015435 183 LHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVA------DGGECLVAQSYAKNM- 255 (407)
Q Consensus 183 i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~------~~~~~i~~~s~sK~~- 255 (407)
+ +|||||||.+++.+++++|+++|++||++||+||+|.++.+++. ....++..+.. ...++++++||||.+
T Consensus 277 l-~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~-~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~ 354 (534)
T PLN02231 277 V-INPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPD-KKFHSFKKVARSMGYGEKDISLVSFQSVSKGYY 354 (534)
T ss_pred E-eCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC-CCcccHHHHHhhhccccCCceEEEEeccCcccc
Confidence 6 89999999999999999999999999999999999999998531 12334333321 123689999999975
Q ss_pred cccCCCcceeEEeec--ChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcCh----hhHHhHHHHHHHHHHHHHHHH
Q 015435 256 GLYGERVGALSIVCK--TEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDS----TMYKEWTLELKAMADRIISMR 329 (407)
Q Consensus 256 ~~~G~r~G~~~~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~ 329 (407)
++||+|+||+ ++. ++++.+.+.+ ... ...+++..+|.++..+++.+ ..++.|.++.+.+++.+++++
T Consensus 355 g~pGlRiGy~--~~~~~~~~l~~~l~k----~~~-~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~ 427 (534)
T PLN02231 355 GECGKRGGYM--EVTGFTSDVREQIYK----VAS-VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRA 427 (534)
T ss_pred cCCccceEEE--EEecCCHHHHHHHHH----HHh-hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 8999999999 443 5665555544 222 23467778888888888653 234455556667889999999
Q ss_pred HHHHHHHHhcCCCCCcccccCCceeEEecCC--CH--------------H-HHHHhHhhccEEEcCCC-----------e
Q 015435 330 QQLFDALSARGTPGDWSHIIKQIGMFTFTGL--NS--------------E-QVAFMTKEYHIYMTSDG-----------R 381 (407)
Q Consensus 330 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~--------------~-~~~~~l~~~gi~~~~gg-----------R 381 (407)
+++.+.|++++. +.+..|+||||.|.++ .. + ++.++++++||++.||. |
T Consensus 428 ~~l~~~L~~~~g---i~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~R 504 (534)
T PLN02231 428 KTLEDALNSLEG---VTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFR 504 (534)
T ss_pred HHHHHHHhcCCC---ceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEE
Confidence 999999998732 7888999999999543 21 1 24567888999999972 8
Q ss_pred EEecCCCCCChhHHHHHHHHHHHh
Q 015435 382 ISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 382 is~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
+++.. ++++++.++++|++++++
T Consensus 505 it~~~-~~e~l~eal~RL~~~~~~ 527 (534)
T PLN02231 505 CTILP-QEDKIPAIVSRLTEFHKS 527 (534)
T ss_pred EEeCC-CHHHHHHHHHHHHHHHHH
Confidence 89874 889999999999998764
No 30
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.8e-45 Score=350.62 Aligned_cols=372 Identities=14% Similarity=0.151 Sum_probs=288.3
Q ss_pred CCcccccccccCCCCCchhhhh---HhhhhcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCc
Q 015435 1 MDSESVFGKIVRAPEDPILGVT---VAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGL 77 (407)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~ 77 (407)
||.+-+.+|++..+++...... +.. ...+.+++||+.|.| .. +.++.+.+.+.+.+. ....+|.+..|.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~~g~p---~~-~~~~~~~~~~~~~~~---~~~~~Y~~~~G~ 72 (402)
T PRK06107 1 MSTFVPAARVSRIKPSPSTAAAARAREL-RAAGRSIVDLTVGEP---DF-DTPDHIKQAAVAAIE---RGETKYTLVNGT 72 (402)
T ss_pred CCchhhhHHhhhcCccHHHHHHHHHHHH-HhccCCEEEcCCCCC---CC-CCCHHHHHHHHHHHH---cCCCCCCCCCCC
Confidence 4554455666665555433322 222 234578999999986 22 334444444444443 234679999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeec
Q 015435 78 VDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYD 157 (407)
Q Consensus 78 ~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~ 157 (407)
+++|+++++++....+..+++++|++ |+|+++++.+++ ...+.+||+|++++|+|..|...+...|.+++.+++..
T Consensus 73 ~~lr~~ia~~l~~~~g~~~~~~~i~~--t~G~~~al~~~~--~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~ 148 (402)
T PRK06107 73 PALRKAIIAKLERRNGLHYADNEITV--GGGAKQAIFLAL--MATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPE 148 (402)
T ss_pred HHHHHHHHHHHHHhcCCCCChhhEEE--eCCHHHHHHHHH--HHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCc
Confidence 99999999999655566667899999 999999999984 44578999999999999999999999999998888843
Q ss_pred CCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc-CceeeeccccccccCCCCCchhHHHH
Q 015435 158 PATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSK-GLLPFFDSAYQGFASGSLDADAQSVR 236 (407)
Q Consensus 158 ~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~-~~~li~D~~y~~~~~~~~~~~~~~~~ 236 (407)
++++.+|++++++.+. ++++++++ ++|+||||.+++.+++++|+++|++| ++++|+||+|.++.+++. ...++.
T Consensus 149 ~~~~~~~~~~l~~~~~--~~~~~v~l-~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~--~~~~~~ 223 (402)
T PRK06107 149 EQGFKLTPEALEAAIT--PRTRWLIL-NAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDE--PTPHLL 223 (402)
T ss_pred ccCCCCCHHHHHhhcC--cCceEEEE-ECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCC--CCCCHH
Confidence 4456789999999886 55667766 89999999999999999999999998 999999999999887542 223333
Q ss_pred HHH-HcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHH
Q 015435 237 MFV-ADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWT 315 (407)
Q Consensus 237 ~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 315 (407)
.+. ...+++++++||||.|+++|+|+||+ +++ +.+.+.+.........+++.+.|.++..+++...
T Consensus 224 ~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~--~~~-----~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~------ 290 (402)
T PRK06107 224 AAAPELRDRVLVTNGVSKTYAMTGWRIGYA--AGP-----ADLIAAINKLQSQSSSCPSSISQAAAAAALNGDQ------ 290 (402)
T ss_pred HhCcCccCCEEEEeccchhhcCcccceeee--ecC-----HHHHHHHHHHHHhcccCCChHHHHHHHHHhcCCh------
Confidence 332 22468999999999999999999999 565 4455556656555556889999999999997543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCC---------------C-HHHHHHhHhhccEEEcCC
Q 015435 316 LELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL---------------N-SEQVAFMTKEYHIYMTSD 379 (407)
Q Consensus 316 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~---------------~-~~~~~~~l~~~gi~~~~g 379 (407)
+++++.++.++++++.+.+.|++.+. +.+..|.+|+|.|+.+ + .+++..+++++||.+.||
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~L~~~~g---~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg 367 (402)
T PRK06107 291 SFVTESVAVYKQRRDYALALLNAIPG---LSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQG 367 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC---CcccCCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCc
Confidence 56788889999999999999988632 6778899999999864 2 244667888899999998
Q ss_pred C--------eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 380 G--------RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 380 g--------Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
. ||+++. +++++++++++|+++++++
T Consensus 368 ~~Fg~~~~iRis~~~-~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 368 TAYGLSPYFRLSIAT-SLETLEEACARIERAVAAL 401 (402)
T ss_pred cccCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHhc
Confidence 3 999996 8899999999999998764
No 31
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.2e-45 Score=347.33 Aligned_cols=343 Identities=14% Similarity=0.129 Sum_probs=268.1
Q ss_pred CCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCC-CCCC-ceEEeec
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPA-IKDN-RVTTVQC 106 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~-~~~~-~i~~~~t 106 (407)
++.++|||++|.+ .. +.++...+++...+. ......|+ ..|.+++|+++++++....+.. ++++ +|++ |
T Consensus 42 ~~~~~i~L~~g~p---~~-~~~~~~~~~l~~~~~--~~~~~~Y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~i--t 112 (410)
T PRK06290 42 PDMELIDMGVGEP---DE-MADESVVEVLCEEAK--KPENRGYA-DNGIQEFKEAAARYMEKVFGVKDIDPVTEVIH--S 112 (410)
T ss_pred CCCCeEEcCCCCC---CC-CCCHHHHHHHHHHHh--CCCCCCCC-CCCcHHHHHHHHHHHHHHcCCCcCCCcceEEE--c
Confidence 4567999999986 32 334444555444443 22345685 4899999999999996544554 6665 7999 9
Q ss_pred CCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecC
Q 015435 107 LSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHAC 186 (407)
Q Consensus 107 ~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~ 186 (407)
+|+++++..++ ...+.+||.|+++.|+|+.+...++..|.+++.++++.+.++.+|++++++.+. ++++++++ ++
T Consensus 113 ~Gs~~al~~~~--~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~--~~~k~i~l-~n 187 (410)
T PRK06290 113 IGSKPALAMLP--SCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIK--EKAKLLYL-NY 187 (410)
T ss_pred cCHHHHHHHHH--HHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhc--ccceEEEE-EC
Confidence 99999999985 344789999999999999999999999999999999544456789999998886 45677777 79
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeE
Q 015435 187 AHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALS 266 (407)
Q Consensus 187 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 266 (407)
||||||.+++.+++++|+++|++||++||+||+|.++.+++. ..++..+....+++|+++||||.||++|+|+||+
T Consensus 188 P~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~---~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~i- 263 (410)
T PRK06290 188 PNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGK---PLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFV- 263 (410)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCC---CcChhcCCCccccEEEEeechhhcCCchhheEeE-
Confidence 999999999999999999999999999999999999987532 1222222223457899999999999999999999
Q ss_pred EeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 015435 267 IVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWS 346 (407)
Q Consensus 267 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 346 (407)
+++ + .+.+.+.........+++.+.|.++..++++. .++++.+++++++++++.+.|++.| +.
T Consensus 264 -i~~-~----~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~g----~~ 326 (410)
T PRK06290 264 -VGN-E----LIVKAFATVKDNNDSGQFIAIQKAGIYALDHP-------EITEKIREKYSRRLDKLVKILNEVG----FK 326 (410)
T ss_pred -EeC-H----HHHHHHHHHHhccccCCcHHHHHHHHHHhhCc-------HHHHHHHHHHHHHHHHHHHHHHhCC----Ce
Confidence 555 3 45555555555555566778899999998875 3466788899999999999999887 77
Q ss_pred cccCCceeEEecCCC-----------H-HHHHHhHhhccEEEcCCC------eEEecC--CCCCChhHHHHHHHHHHHhh
Q 015435 347 HIIKQIGMFTFTGLN-----------S-EQVAFMTKEYHIYMTSDG------RISMAG--LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 347 ~~~~~~~~~~~~~~~-----------~-~~~~~~l~~~gi~~~~gg------Ris~~~--~~~e~i~~~~~~l~~~l~~~ 406 (407)
+..|.+++|.|+.+. . ++...++++.++.+.|+. ||+++. .++++.++++++|++.|.++
T Consensus 327 ~~~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 327 AEMPGGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred ecCCCeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 788899999997552 3 345677777778887752 999984 36789999999999998764
No 32
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=2.9e-45 Score=349.29 Aligned_cols=360 Identities=18% Similarity=0.158 Sum_probs=276.6
Q ss_pred ccccCCCCCchhhhhHhhhhcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHH
Q 015435 8 GKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKL 87 (407)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~ 87 (407)
++++..++..+..... ..+ ..+.++|+.|.| +. +.|+...+.+.+.+. ....+|++..|.+++|++++++
T Consensus 6 ~~~~~~~~~~~~~~~~-~~~--~~~~i~l~~g~p---~~-~~p~~~~~~~~~~~~---~~~~~Y~~~~G~~~lr~~ia~~ 75 (387)
T PRK08912 6 PVFADLPTTIFEVMSQ-LAR--EHGAINLGQGFP---DD-PGPEDVRRAAADALL---DGSNQYPPMMGLPELRQAVAAH 75 (387)
T ss_pred HHHhhCCCCHHHHHHH-HHh--hCCeEEccCCCC---CC-CCCHHHHHHHHHHHh---cCCCCCCCCCCcHHHHHHHHHH
Confidence 4455545454433333 222 258999999986 33 446666666666554 2346799999999999999999
Q ss_pred HhCCCCCCCCCC-ceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChh
Q 015435 88 ILGADSPAIKDN-RVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQ 166 (407)
Q Consensus 88 ~~~~~~~~~~~~-~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~ 166 (407)
+...++..++++ +|++ |+|+++++.+++ ...+.+||+|++++|+|..+...++..|.+++.++++ ++++++|++
T Consensus 76 ~~~~~g~~~~~~~~i~~--t~G~~~al~~~~--~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~ 150 (387)
T PRK08912 76 YARFQGLDLDPETEVMV--TSGATEALAAAL--LALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLE-PPHWRLPRA 150 (387)
T ss_pred HHHHhCCCCCCcccEEE--eCCcHHHHHHHH--HHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecC-cccCcCCHH
Confidence 965555556777 9999 999999998884 4447899999999999999999999999999999983 446789999
Q ss_pred hHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEE
Q 015435 167 GLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECL 246 (407)
Q Consensus 167 ~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i 246 (407)
++++.+. ++++++++ ++||||||.+++.+++++|+++|++|++++|+||+|.++.+++. ...++..+....++++
T Consensus 151 ~l~~~~~--~~~~~v~l-~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~i 225 (387)
T PRK08912 151 ALAAAFS--PRTKAVLL-NNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGR--RHIPLMTLPGMRERTV 225 (387)
T ss_pred HHHHHhC--ccceEEEE-eCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCC--CCcChhhCCCccCceE
Confidence 9999886 55677776 79999999999999999999999999999999999999887642 1222222222246899
Q ss_pred EEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHH
Q 015435 247 VAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRII 326 (407)
Q Consensus 247 ~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (407)
+++||||.||++|+|+||+ +++ ++ +.+.+.........+.+...|.++...+.... +++++.+++++
T Consensus 226 ~~~S~SK~~g~~GlRiG~~--~~~-~~----~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~~~ 292 (387)
T PRK08912 226 KIGSAGKIFSLTGWKVGFV--CAA-PP----LLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPD------DYFEGMRADLA 292 (387)
T ss_pred EEeechhhccCcCceeEEE--ecC-HH----HHHHHHHHHhhccccCChHHHHHHHHHHhCCH------HHHHHHHHHHH
Confidence 9999999999999999999 565 44 44444444443334556666777777665432 45678889999
Q ss_pred HHHHHHHHHHHhcCCCCCcccccCCceeEEecCCC-------H-HHHHHhHhhccEEEcCC----------C--eEEecC
Q 015435 327 SMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN-------S-EQVAFMTKEYHIYMTSD----------G--RISMAG 386 (407)
Q Consensus 327 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~l~~~gi~~~~g----------g--Ris~~~ 386 (407)
++++++.+.|+..+ +.+..+.+++|.|+.+. . +++..+++++||.+.|| + ||+++.
T Consensus 293 ~~~~~l~~~L~~~g----~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~ 368 (387)
T PRK08912 293 RSRDRLAAGLRRIG----FPVLPSQGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK 368 (387)
T ss_pred HHHHHHHHHHHhCC----CcccCCCcceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC
Confidence 99999999999887 67778889999998552 3 24556677889999885 1 999997
Q ss_pred CCCCChhHHHHHHHHHHHh
Q 015435 387 LSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 387 ~~~e~i~~~~~~l~~~l~~ 405 (407)
+++.++.++++|++++++
T Consensus 369 -~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 369 -RDATLDEAVERLAAARRR 386 (387)
T ss_pred -CHHHHHHHHHHHHHHHhc
Confidence 789999999999998865
No 33
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=6.6e-45 Score=346.67 Aligned_cols=361 Identities=16% Similarity=0.187 Sum_probs=281.4
Q ss_pred cccccCCCCCchhhhhHhhhh--cCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHH
Q 015435 7 FGKIVRAPEDPILGVTVAYNK--DTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLS 84 (407)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~ 84 (407)
.+++.+..+..+..+...+.+ ..++++++|+.|.+ .. +.|..+.+++.+.+. .....|.+..|.+++|+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~---~~-~~~~~v~~a~~~~~~---~~~~~Y~~~~g~~~lr~~i 78 (387)
T PRK08960 6 SRRSRDIEPFHVMALLARANELEAAGHDVIHLEIGEP---DF-TTAEPIVAAGQAALA---AGHTRYTAARGLPALREAI 78 (387)
T ss_pred hhHHHhCCchHHHHHHHHHHHHHhcCCCeEEeCCCCC---CC-CCCHHHHHHHHHHHh---cCCCccCCCCCCHHHHHHH
Confidence 455555566666655543331 34578999999986 22 446666666655554 2345698899999999999
Q ss_pred HHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcC
Q 015435 85 AKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLN 164 (407)
Q Consensus 85 a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 164 (407)
++++...++..+++++|++ |+|+++++.++... .+.+||+|++++|+|+.+...+...|.+++.++++.+.++.+|
T Consensus 79 a~~~~~~~g~~~~~~~i~i--t~G~~~al~~~~~~--~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d 154 (387)
T PRK08960 79 AGFYAQRYGVDVDPERILV--TPGGSGALLLASSL--LVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLT 154 (387)
T ss_pred HHHHHHHhCCCCChhhEEE--ccCcHHHHHHHHHH--hcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCC
Confidence 9999655556677899999 99999999998533 3789999999999999999999999999999998544456899
Q ss_pred hhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCc
Q 015435 165 FQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGE 244 (407)
Q Consensus 165 ~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~ 244 (407)
++++++.+. ++++++++ ++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ..++ ....++
T Consensus 155 ~~~l~~~~~--~~~~~i~i-~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~---~~~~---~~~~~~ 225 (387)
T PRK08960 155 PALVERHWN--ADTVGALV-ASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVD---AASV---LEVDDD 225 (387)
T ss_pred HHHHHHHhC--ccceEEEE-ECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC---CCCh---hhccCC
Confidence 999999887 55666666 89999999999999999999999999999999999999887532 2222 223468
Q ss_pred EEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHH
Q 015435 245 CLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADR 324 (407)
Q Consensus 245 ~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (407)
+++++||||.||++|+|+||+ +++ +.+...+.........+++.+.|.++..++.+. +.+++++.++.
T Consensus 226 vi~~~S~SK~~g~~GlRiG~~--~~~-----~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~-----~~~~l~~~~~~ 293 (387)
T PRK08960 226 AFVLNSFSKYFGMTGWRLGWL--VAP-----PAAVPELEKLAQNLYISASTPAQHAALACFEPE-----TLAILEARRAE 293 (387)
T ss_pred EEEEeecccccCCcccEEEEE--EcC-----HHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcC-----cHHHHHHHHHH
Confidence 999999999999999999999 566 345555555555555677889999888888642 13667888899
Q ss_pred HHHHHHHHHHHHHhcCCCCCccc-ccCCceeEEecCC-----CHH-HHHHhHhhccEEEcCCC-----------eEEecC
Q 015435 325 IISMRQQLFDALSARGTPGDWSH-IIKQIGMFTFTGL-----NSE-QVAFMTKEYHIYMTSDG-----------RISMAG 386 (407)
Q Consensus 325 ~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~-~~~~~l~~~gi~~~~gg-----------Ris~~~ 386 (407)
++++++.+.+.|+..+ +.. ..|.+|+|.|+++ +.. ++.++++++||.+.||. ||+++.
T Consensus 294 ~~~~~~~l~~~L~~~~----~~~~~~p~g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~ 369 (387)
T PRK08960 294 FARRRDFLLPALRELG----FGIAVEPQGAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ 369 (387)
T ss_pred HHHHHHHHHHHHHhcC----CcCCcCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC
Confidence 9999999999999876 443 4678999999865 333 45567778999999861 999996
Q ss_pred CCCCChhHHHHHHHHHHH
Q 015435 387 LSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 387 ~~~e~i~~~~~~l~~~l~ 404 (407)
+.+.++.++++|+++++
T Consensus 370 -~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 370 -SLPRLQEAVERIARGLR 386 (387)
T ss_pred -CHHHHHHHHHHHHHHHh
Confidence 77888888888888764
No 34
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=5.1e-45 Score=349.07 Aligned_cols=367 Identities=15% Similarity=0.181 Sum_probs=280.0
Q ss_pred CCchhhhhHhhhhc--CCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCC
Q 015435 15 EDPILGVTVAYNKD--TSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGAD 92 (407)
Q Consensus 15 ~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~ 92 (407)
.+++....+.+++. .++++++|++|.|......+.++.+.+++.+.+. ......|.+..|..++|+++++++.. .
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~Y~~~~g~~~lr~aia~~~~~-~ 89 (401)
T TIGR01264 13 VNPIRAIVDNMKVKPNPEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLD--SGKYNGYAPTVGALSAREAIASYYHN-P 89 (401)
T ss_pred hhHHHHHHHHHHhhhhcCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHh--ccCCCCCCCCCCCHHHHHHHHHHHhh-c
Confidence 34566666555543 3468899999987211122334445554444443 23345698999999999999999954 4
Q ss_pred CCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHH
Q 015435 93 SPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDL 172 (407)
Q Consensus 93 ~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i 172 (407)
+..+++++|++ |+|+++++.+++. ..+.+||+|++++|+|..+...++..|++++.+++..+.++++|++.+++.+
T Consensus 90 ~~~~~~~~i~~--t~G~~~al~~~~~--~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~ 165 (401)
T TIGR01264 90 DGPIEADDVVL--CSGCSHAIEMCIA--ALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLI 165 (401)
T ss_pred CCCCCHHHEEE--CcChHHHHHHHHH--HhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHh
Confidence 44577899999 9999999999853 3477999999999999999999999999999999854445789999999988
Q ss_pred HcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecC
Q 015435 173 RAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYA 252 (407)
Q Consensus 173 ~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 252 (407)
. ++++++++ ++||||||.+++.+++++|+++|+++|+++|+||+|.+|.+++. ...++..+.. ..++|+++|||
T Consensus 166 ~--~~~~~v~~-~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~-~~~vi~~~SfS 239 (401)
T TIGR01264 166 D--EKTAALIV-NNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGA--TFEPLASLSS-TVPILSCGGLA 239 (401)
T ss_pred c--cCceEEEE-cCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCc--ccccHHHcCC-CCcEEEEccCc
Confidence 6 45667666 99999999999999999999999999999999999999987642 2233333221 23589999999
Q ss_pred ccccccCCCcceeEEeecCh-hhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHH
Q 015435 253 KNMGLYGERVGALSIVCKTE-DVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQ 331 (407)
Q Consensus 253 K~~~~~G~r~G~~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (407)
|.|+++|+|+||+ +++++ +....+...+..... ...+++.+.|.++..++.+.. .+++++.++.+++++++
T Consensus 240 K~~~~~GlRiG~i--v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~-----~~~l~~~~~~~~~~r~~ 311 (401)
T TIGR01264 240 KRWLVPGWRLGWI--IIHDRRGILRDIRDGLVKLSQ-RILGPCTIVQGALPSILLRTP-----QEYFDGTLSVLESNAML 311 (401)
T ss_pred ccCCCccceEEEE--EecCcchhHHHHHHHHHHHhh-ccCCCCcHHHHHHHHHHHhCc-----HHHHHHHHHHHHHHHHH
Confidence 9999999999999 56643 222334444444332 234678889999988886521 25678888999999999
Q ss_pred HHHHHHhcCCCCCcccccCCceeEEecCCC----------HHHHHHhHhhccEEEcCCC--------eEEecCCCCCChh
Q 015435 332 LFDALSARGTPGDWSHIIKQIGMFTFTGLN----------SEQVAFMTKEYHIYMTSDG--------RISMAGLSSKTVP 393 (407)
Q Consensus 332 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~gi~~~~gg--------Ris~~~~~~e~i~ 393 (407)
+.+.|++.+. +.+..|.+|+|.|+.+. .+++..+++++||.+.||. ||+++. ++++++
T Consensus 312 l~~~L~~~~~---~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~-~~~~l~ 387 (401)
T TIGR01264 312 CYGALAAVPG---LRPVMPSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTV-PVVMME 387 (401)
T ss_pred HHHHHHhCCC---CcccCCCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcC-CHHHHH
Confidence 9999998732 67778899999999742 3345677778999999863 999996 789999
Q ss_pred HHHHHHHHHHHhh
Q 015435 394 HLTDAIHAAVTRM 406 (407)
Q Consensus 394 ~~~~~l~~~l~~~ 406 (407)
.++++|.++++++
T Consensus 388 ~~l~rl~~~~~~~ 400 (401)
T TIGR01264 388 EACSRIQEFCERH 400 (401)
T ss_pred HHHHHHHHHHhcc
Confidence 9999999998764
No 35
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=6.7e-45 Score=346.25 Aligned_cols=362 Identities=15% Similarity=0.186 Sum_probs=280.1
Q ss_pred ccccccCCCCCchhhhhHhhhhcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHH
Q 015435 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSA 85 (407)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a 85 (407)
|.+++.......+......+. +.++.|+|+.|.| .. +.+..+.+++.+.+. .....|.+..|.+++|++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~p---~~-~~~~~~~~a~~~~~~---~~~~~Y~~~~g~~~lr~~ia 75 (387)
T PRK07683 5 INPRVKDIQISGIRQFSNMVQ--NYDNLISLTIGQP---DF-PTPSHVKEAAKRAIT---ENYTSYTHNAGLLELRKAAC 75 (387)
T ss_pred hhHHHHhCCccHHHHHHHHHH--hcCCeEEecCCCC---CC-CCCHHHHHHHHHHHh---cCCCCCCCCCCCHHHHHHHH
Confidence 345665555555544444432 2367899999975 32 334455555555543 23567988999999999999
Q ss_pred HHHhCCCCCCCCCC-ceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcC
Q 015435 86 KLILGADSPAIKDN-RVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLN 164 (407)
Q Consensus 86 ~~~~~~~~~~~~~~-~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 164 (407)
+++...++..++++ +|++ |+|+++++.+++. ..+.+||+|+++.|+|..+...++..|++++.++.+ ++++.+|
T Consensus 76 ~~l~~~~g~~~~~~~~I~~--t~G~~~al~~~~~--~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~ 150 (387)
T PRK07683 76 NFVKDKYDLHYSPESEIIV--TIGASEAIDIAFR--TILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTR-STGFRLT 150 (387)
T ss_pred HHHHHHhCCCCCCCCcEEE--eCChHHHHHHHHH--HhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecC-cccCCCC
Confidence 99965556666777 9999 9999999999853 347799999999999999999999999999999983 4556778
Q ss_pred hhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCc
Q 015435 165 FQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGE 244 (407)
Q Consensus 165 ~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~ 244 (407)
++++++.+. ++++++++ ++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ..++..+.+..++
T Consensus 151 ~~~l~~~~~--~~~~~i~i-~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~---~~~~~~~~~~~~~ 224 (387)
T PRK07683 151 AEALENAIT--EKTRCVVL-PYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQP---HTSIAHFPEMREK 224 (387)
T ss_pred HHHHHHhcC--cCceEEEE-eCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCC---cCChhhccCCcCC
Confidence 899999886 45677666 99999999999999999999999999999999999999987532 2233333233468
Q ss_pred EEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHH
Q 015435 245 CLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADR 324 (407)
Q Consensus 245 ~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (407)
+++++||||.||+||+|+||+ +++ +++ ++.+.........+++.+.|.++..++.+.. .+.++.+++
T Consensus 225 vi~~~s~SK~~~~pGlRiG~i--~~~-~~l----~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~ 291 (387)
T PRK07683 225 TIVINGLSKSHSMTGWRIGFL--FAP-SYL----AKHILKVHQYNVTCASSISQYAALEALTAGK------DDAKMMRHQ 291 (387)
T ss_pred eEEEeeccccccCccceeEEE--EcC-HHH----HHHHHHHHHhccCCCChHHHHHHHHHHhCCh------HHHHHHHHH
Confidence 999999999999999999999 455 444 4444433333334567788999998887653 346777888
Q ss_pred HHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCC-----CH-HHHHHhHhhccEEEcCCC----------eEEecCCC
Q 015435 325 IISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL-----NS-EQVAFMTKEYHIYMTSDG----------RISMAGLS 388 (407)
Q Consensus 325 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~l~~~gi~~~~gg----------Ris~~~~~ 388 (407)
++++++++.+.|++.+ +.+..+.+++|.|+.+ +. +++.++++++||.+.||. ||+++. +
T Consensus 292 ~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~-~ 366 (387)
T PRK07683 292 YKKRRDYVYNRLISMG----LDVEKPTGAFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAY-S 366 (387)
T ss_pred HHHHHHHHHHHHHHcC----CcccCCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecC-C
Confidence 9999999999998876 7778889999999743 33 345677888999999862 999996 8
Q ss_pred CCChhHHHHHHHHHHHh
Q 015435 389 SKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 389 ~e~i~~~~~~l~~~l~~ 405 (407)
+++++.++++|.+++++
T Consensus 367 ~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 367 IETLKEGLDRLEAFLQQ 383 (387)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 89999999999998865
No 36
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=4.3e-45 Score=347.21 Aligned_cols=356 Identities=15% Similarity=0.180 Sum_probs=273.1
Q ss_pred cccccCCCCCchhhhhHhhhhcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHH
Q 015435 7 FGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAK 86 (407)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~ 86 (407)
++++...+.+ +........ ..++.|+|+.|.+ +. +.++...+++.+.+. ....+|+|..|.+++|+++++
T Consensus 8 ~~~~~~~~~~-~~~~~~~~~--~~~~~i~l~~g~p---~~-~~~~~~~~~~~~~~~---~~~~~Y~~~~G~~~lr~~ia~ 77 (384)
T PRK12414 8 RSKLPDVGTT-IFTVIGQLA--AQHDALNLSQGAP---NF-APDPALVEGVARAMR---DGHNQYAPMAGIAALREALAE 77 (384)
T ss_pred HHhcccCCcc-HHHHHHHHH--HhCCeEEcCCCCC---CC-CCCHHHHHHHHHHHH---hCCCCcCCCCCcHHHHHHHHH
Confidence 5566555543 333333222 3367999999986 32 334444444444443 234679999999999999999
Q ss_pred HHhCCCCCCCCC-CceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcCh
Q 015435 87 LILGADSPAIKD-NRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNF 165 (407)
Q Consensus 87 ~~~~~~~~~~~~-~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~ 165 (407)
++....+...++ ++|++ |+|+++++.+++ ...+.+||+|++++|+|..+...++..|.+++.+++. ++++.+|+
T Consensus 78 ~l~~~~g~~~~~~~~i~i--t~g~~~al~~~~--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~~d~ 152 (384)
T PRK12414 78 KTERLYGARYDPASEVTV--IASASEGLYAAI--SALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLS-PEDFRVNW 152 (384)
T ss_pred HHHHHhCCCCCCCCcEEE--ECChHHHHHHHH--HHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecC-ccccccCH
Confidence 985444444444 68999 999999999884 4447899999999999999999999999999999984 44578999
Q ss_pred hhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcE
Q 015435 166 QGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245 (407)
Q Consensus 166 ~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (407)
+++++.+. ++++++++ ++||||||.+++.+++++|+++|++||+++|+||+|.++.+++.. ..++..+....+++
T Consensus 153 ~~l~~~l~--~~~~~v~i-~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~--~~~~~~~~~~~~~~ 227 (384)
T PRK12414 153 DEVAAAIT--PRTRMIIV-NTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGAR--HHSMARHRELAERS 227 (384)
T ss_pred HHHHhhcC--cccEEEEE-cCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCC--ccCcccCcCccCcE
Confidence 99999886 55677766 899999999999999999999999999999999999998876421 12222222234589
Q ss_pred EEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHH
Q 015435 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRI 325 (407)
Q Consensus 246 i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 325 (407)
++++||||.||++|+|+||+ +++ +.+.+.+.........+++.+.|.++..++++.. ...+.++.+
T Consensus 228 i~~~SfSK~~~~pGlRiG~~--v~~-----~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~-------~~~~~~~~~ 293 (384)
T PRK12414 228 VIVSSFGKSYHVTGWRVGYC--LAP-----AELMDEIRKVHQFMVFSADTPMQHAFAEALAEPA-------SYLGLGAFY 293 (384)
T ss_pred EEEecccccccCccceEEEE--ecC-----HHHHHHHHHHHhheecCCCcHHHHHHHHHhcCCh-------HHHHHHHHH
Confidence 99999999999999999999 566 3455555555544455788899999999998753 123467788
Q ss_pred HHHHHHHHHHHHhcCCCCCcccccCCceeEEecCC-------CHHHHHHhHhhccEEEcCCC------------eEEecC
Q 015435 326 ISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL-------NSEQVAFMTKEYHIYMTSDG------------RISMAG 386 (407)
Q Consensus 326 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~gi~~~~gg------------Ris~~~ 386 (407)
+++++++.+.|++.+ +.+.++.||+|.|+.+ +.+++.++++++||.+.||. ||+++.
T Consensus 294 ~~~r~~l~~~L~~~g----~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~ 369 (384)
T PRK12414 294 QRKRDLLARELAGSR----FELLPSEGSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK 369 (384)
T ss_pred HHHHHHHHHHHHhCC----CeecCCCcceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC
Confidence 999999999999886 6778889999999743 34566688888999998851 999997
Q ss_pred CCCCChhHHHHHHHH
Q 015435 387 LSSKTVPHLTDAIHA 401 (407)
Q Consensus 387 ~~~e~i~~~~~~l~~ 401 (407)
+++++++++++|.+
T Consensus 370 -~~~~~~~~~~rl~~ 383 (384)
T PRK12414 370 -DDATLVEGARRLCS 383 (384)
T ss_pred -CHHHHHHHHHHHhh
Confidence 78889999998875
No 37
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2e-44 Score=348.69 Aligned_cols=348 Identities=16% Similarity=0.211 Sum_probs=270.5
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhcc----------ccccccCCCCCCcHHHHHHHHHHHhCCCC--CCCC
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVND----------QSRVKEYLPIVGLVDFNKLSAKLILGADS--PAIK 97 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~y~~~~g~~~l~~~~a~~~~~~~~--~~~~ 97 (407)
...+|+|+.++. +.+.+.+...+....+. ......|++..|.++||+++++++...++ ..++
T Consensus 37 p~g~i~L~~~En------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~ 110 (468)
T PLN02450 37 PSGIIQMGLAEN------QLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFD 110 (468)
T ss_pred CCeeEEeehhHh------HhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcC
Confidence 347999999873 45557777776554200 01234588888999999999999954333 3367
Q ss_pred CCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHh-hcCceeeEEEeecCCCCCcChhhHHHHHHcC-
Q 015435 98 DNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFT-LAGLSVKTYRYYDPATRGLNFQGLLEDLRAA- 175 (407)
Q Consensus 98 ~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~- 175 (407)
+++|++ |+|+++++.+++ ...+.+||.|++++|+|+.+...+. ..|++++.+++..++++.+|++++++.+.+.
T Consensus 111 ~~~Iii--t~Ga~~al~~l~--~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~ 186 (468)
T PLN02450 111 PNKLVL--TAGATSANETLM--FCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQ 186 (468)
T ss_pred hHHeEE--ccChHHHHHHHH--HHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHH
Confidence 899999 999999999994 4457899999999999999988888 5899999999854556778889999887631
Q ss_pred ---CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHH--------cCCc
Q 015435 176 ---PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVA--------DGGE 244 (407)
Q Consensus 176 ---~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~--------~~~~ 244 (407)
.+.+++++ +|||||||.+++.+++++|+++|++||++||+||+|.++.+.+. +..+...... ..++
T Consensus 187 ~~~~~~k~v~l-~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~--~~~s~l~~~~~~~~~~~~~~~~ 263 (468)
T PLN02450 187 KLNLKVKGVLI-TNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSP--GFVSVMEVLKDRKLENTDVSNR 263 (468)
T ss_pred hcCCCeeEEEE-ecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCC--CcccHHHHhhhcccccCCCCCc
Confidence 24566666 89999999999999999999999999999999999999887642 2223222211 2468
Q ss_pred EEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHH
Q 015435 245 CLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADR 324 (407)
Q Consensus 245 ~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (407)
+++++||||.|+++|+|+||+ +++++.+.+. +..... ...++.+.|.++..+|++..+.+ .++++.+++
T Consensus 264 vi~l~S~SK~~~l~GlRiG~l--i~~~~~l~~~----~~~~~~--~~~~s~~~Q~a~~~~L~~~~~~~---~~l~~~~~~ 332 (468)
T PLN02450 264 VHIVYSLSKDLGLPGFRVGAI--YSNDEMVVSA----ATKMSS--FGLVSSQTQYLLSALLSDKKFTK---NYLEENQKR 332 (468)
T ss_pred EEEEEeccccCCCCCccEEEE--EECCHHHHHH----HHHHhh--cCCCCHHHHHHHHHHhCCchhHH---HHHHHHHHH
Confidence 999999999999999999999 6775543332 222221 23567889999999998864221 256778899
Q ss_pred HHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCC-----------HHHHHHhHhhccEEEcCCC----------eEE
Q 015435 325 IISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN-----------SEQVAFMTKEYHIYMTSDG----------RIS 383 (407)
Q Consensus 325 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~gi~~~~gg----------Ris 383 (407)
++++++.+.+.|++.+ +.+..+++|+|+|+.+. .+...++++++||.+.||. ||+
T Consensus 333 l~~rr~~l~~~L~~~g----i~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~ 408 (468)
T PLN02450 333 LKQRQKKLVSGLEAAG----IKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVC 408 (468)
T ss_pred HHHHHHHHHHHHHHcC----CcccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEE
Confidence 9999999999999887 67788999999999763 1234567788999999972 999
Q ss_pred ecCCCCCChhHHHHHHHHHHHh
Q 015435 384 MAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 384 ~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
++.++++++++++++|++++++
T Consensus 409 f~~~~~~~l~~~l~ri~~~l~~ 430 (468)
T PLN02450 409 FANMSEETLDLAMKRLKSFVES 430 (468)
T ss_pred ecCCCHHHHHHHHHHHHHHHHh
Confidence 9965789999999999999865
No 38
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=2.1e-44 Score=343.50 Aligned_cols=360 Identities=15% Similarity=0.189 Sum_probs=277.8
Q ss_pred cccccCCCCCchhhhhHhhh--hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHH
Q 015435 7 FGKIVRAPEDPILGVTVAYN--KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLS 84 (407)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~ 84 (407)
.+++.....+.+........ ...++++++|+.|.+ .. +.++.+.+++.+.+. .....|++..|.+++|+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~---~~-~~~~~~~~~~~~~~~---~~~~~Y~~~~g~~~lr~~i 76 (388)
T PRK07337 4 AARVDAIEPFYVMELAKEAQALERAGRDIIHMGIGEP---DF-TAPEPVVEAAARALR---RGVTQYTSALGLAPLREAI 76 (388)
T ss_pred hhHhHhcCchHHHHHHHHHHHHHhcCCCEEEeCCcCC---CC-CCCHHHHHHHHHHHh---cCCCCCCCCCCCHHHHHHH
Confidence 34555555554544443332 224578999999985 22 334455555544443 2356798888999999999
Q ss_pred HHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcC
Q 015435 85 AKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLN 164 (407)
Q Consensus 85 a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 164 (407)
++++...++..+++++|++ |+|+++++.++.. ..+.+||+|++++|+|..+...++..|.+++.+|++.+.++++|
T Consensus 77 a~~~~~~~~~~~~~~~i~~--t~G~~~al~~~~~--~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 152 (388)
T PRK07337 77 AAWYARRFGLDVAPERIVV--TAGASAALLLACL--ALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLT 152 (388)
T ss_pred HHHHHHHhCCCCChHhEEE--ecCcHHHHHHHHH--HhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCC
Confidence 9999655566677899999 9999999998853 34789999999999999999999999999999998534467899
Q ss_pred hhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCc
Q 015435 165 FQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGE 244 (407)
Q Consensus 165 ~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~ 244 (407)
++++++.+. ++++++++ ++||||||.+++.+++++|+++|+++++++|+||+|.++.+++. ..+. ....++
T Consensus 153 ~~~l~~~~~--~~~~~v~l-~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~---~~~~---~~~~~~ 223 (388)
T PRK07337 153 AADVEAAWG--ERTRGVLL-ASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAA---PVSA---LSLGDD 223 (388)
T ss_pred HHHHHhhcC--ccceEEEE-ECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCC---CcCh---hhccCC
Confidence 999999887 56777776 99999999999999999999999999999999999999887532 1121 123467
Q ss_pred EEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHH
Q 015435 245 CLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADR 324 (407)
Q Consensus 245 ~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (407)
+++++||||.|+++|+|+||+ +++ +.+.+.+.........+++.+.|.++..++.+..+ ...++.++.
T Consensus 224 vi~~~S~SK~~~~~G~RiG~~--~~~-----~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~-----~~~~~~~~~ 291 (388)
T PRK07337 224 VITINSFSKYFNMTGWRLGWL--VVP-----EALVGTFEKLAQNLFICASALAQHAALACFEPDTL-----AIYERRRAE 291 (388)
T ss_pred EEEEEechhhcCCchhheeee--ecC-----HHHHHHHHHHHHHhccCCChHHHHHHHHHhccCch-----HHHHHHHHH
Confidence 899999999999999999999 566 44555555555455557788899998888875421 335677889
Q ss_pred HHHHHHHHHHHHHhcCCCCCccc-ccCCceeEEecCCC---------H-HHHHHhHhhccEEEcCCC-----------eE
Q 015435 325 IISMRQQLFDALSARGTPGDWSH-IIKQIGMFTFTGLN---------S-EQVAFMTKEYHIYMTSDG-----------RI 382 (407)
Q Consensus 325 ~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~---------~-~~~~~~l~~~gi~~~~gg-----------Ri 382 (407)
++++++++.+.|++.+ +.. ..|.+|+|.|+.+. . +++.++++++||.+.||. ||
T Consensus 292 ~~~~r~~~~~~L~~~~----~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri 367 (388)
T PRK07337 292 FKRRRDFIVPALESLG----FKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRL 367 (388)
T ss_pred HHHHHHHHHHHHHhcC----CccccCCCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEE
Confidence 9999999999999876 443 46789999999653 3 345677888999998751 99
Q ss_pred EecCCCCCChhHHHHHHHHHH
Q 015435 383 SMAGLSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 383 s~~~~~~e~i~~~~~~l~~~l 403 (407)
+++. +++.++.++++|++++
T Consensus 368 ~~~~-~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 368 SYAT-SMSRLEEAVARLGKLF 387 (388)
T ss_pred EecC-CHHHHHHHHHHHHHHh
Confidence 9997 7788899999888764
No 39
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-44 Score=342.65 Aligned_cols=366 Identities=16% Similarity=0.210 Sum_probs=278.0
Q ss_pred ccccccCCCCCchhhhhHhhhhcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHH
Q 015435 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSA 85 (407)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a 85 (407)
+.+|+...++..+ ..+....+. .+.+++|+.|.+ .. +.+..+.+++.+.+. ......|.+..|.+++|++++
T Consensus 4 ~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~g~~---~~-~~~~~~~~a~~~~~~--~~~~~~Y~~~~G~~~lr~~~~ 75 (389)
T PRK05957 4 FTSRMDAVQSPII-PVVGQLIRE-NPGTISLGQGVV---SY-PPPPEAIEALNNFLA--NPENHKYQAVQGIPPLLEAIT 75 (389)
T ss_pred hhHHHHhcCCcHH-HHHHHHHHh-CCCeEEccCCCC---CC-CCCHHHHHHHHHHHh--CCCCCCCCCCCCCHHHHHHHH
Confidence 3455555554444 333322222 257899999985 32 445555555545443 233467988999999999999
Q ss_pred HHHhCCCCCCCC-CCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcC
Q 015435 86 KLILGADSPAIK-DNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLN 164 (407)
Q Consensus 86 ~~~~~~~~~~~~-~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 164 (407)
+++....+..++ +++|++ |+|+++++..++ ...+.+||+|++++|+|..+...++..|++++.++. +.++++|
T Consensus 76 ~~l~~~~g~~~~~~~~i~~--t~G~~~~l~~~~--~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~--~~~~~~d 149 (389)
T PRK05957 76 QKLQQDNGIELNNEQAIVV--TAGSNMAFMNAI--LAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPT--DDNYQLQ 149 (389)
T ss_pred HHHHHHhCCCCCCCCeEEE--eCChHHHHHHHH--HHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeec--CCCCCcC
Confidence 999555455455 578999 999999998884 344789999999999999999988999999999998 3457899
Q ss_pred hhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCc
Q 015435 165 FQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGE 244 (407)
Q Consensus 165 ~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~ 244 (407)
++++++.+. ++++++++ ++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ...+...+.+...+
T Consensus 150 ~~~l~~~i~--~~~klv~~-~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~--~~~~~~~~~~~~~~ 224 (389)
T PRK05957 150 PEAIEQAIT--PKTRAIVT-ISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGV--KHFSPGSIPGSGNH 224 (389)
T ss_pred HHHHHHhcC--cCceEEEE-eCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCC--CccChhhCCCccCc
Confidence 999999987 56777766 89999999999999999999999999999999999999988642 11222222344568
Q ss_pred EEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHH
Q 015435 245 CLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADR 324 (407)
Q Consensus 245 ~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (407)
+|+++||||.||++|+|+||+ +++ + .+.+++.........+++.+.|.++..++++.. .++++.++.
T Consensus 225 ~i~~~S~SK~~g~~GlRiG~~--~~~-~----~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~ 291 (389)
T PRK05957 225 TISLYSLSKAYGFASWRIGYM--VIP-I----HLLEAIKKIQDTILICPPVVSQYAALGALQVGK------SYCQQHLPE 291 (389)
T ss_pred EEEEecchhhccCccceeEEE--ecC-H----HHHHHHHHHHhhcccCCCcHHHHHHHHHHhCCh------HHHHHHHHH
Confidence 999999999999999999999 565 3 455555555554555778889999998887643 345666677
Q ss_pred HHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCC----CH-HHHHHhHhhccEEEcCCC----------eEEecCCCC
Q 015435 325 IISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL----NS-EQVAFMTKEYHIYMTSDG----------RISMAGLSS 389 (407)
Q Consensus 325 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~l~~~gi~~~~gg----------Ris~~~~~~ 389 (407)
++++++++.+.|+..+. .+.+..+.+|+|.|+.+ +. +++.++++++||.+.||. ||+++..++
T Consensus 292 ~~~~r~~l~~~L~~~~~--~~~~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~ 369 (389)
T PRK05957 292 IAQVRQILLKSLGQLQD--RCTLHPANGAFYCFLKVNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQK 369 (389)
T ss_pred HHHHHHHHHHHHHhcCC--CccccCCCeeEEEEEeCCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCH
Confidence 89999999999987642 13566788999999854 33 456677777999999961 999986678
Q ss_pred CChhHHHHHHHHHHHh
Q 015435 390 KTVPHLTDAIHAAVTR 405 (407)
Q Consensus 390 e~i~~~~~~l~~~l~~ 405 (407)
+++++++++|.+.++.
T Consensus 370 ~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 370 ATAKEGIERLVQGLKT 385 (389)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8899999999998875
No 40
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=4.3e-44 Score=341.17 Aligned_cols=364 Identities=14% Similarity=0.186 Sum_probs=276.1
Q ss_pred ccccccCCCCCchhhhhHhhhhcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHH
Q 015435 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSA 85 (407)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a 85 (407)
|.+|+++.....+..+..... +.+++|+|+.|.+ .. +.+..+.++..+.+. .....|.+..|.+++|++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~~---~~-~~~~~~~~~~~~~~~---~~~~~Y~~~~g~~~lr~~ia 77 (391)
T PRK07309 7 FNKQLDKIEVSLIRQFDQSIS--DIPGILKLTLGEP---DF-TTPDHVKEAAKRAID---ANQSHYTGMAGLLELRQAAA 77 (391)
T ss_pred HHhhhhhcCccHHHHHHHHHH--hcCCeEEcCCCCC---CC-CCCHHHHHHHHHHHh---cCCCCCCCCCCcHHHHHHHH
Confidence 345555555544444433332 2267999999986 22 224444444444443 22356988999999999999
Q ss_pred HHHhCCCCCCCC-CCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcC
Q 015435 86 KLILGADSPAIK-DNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLN 164 (407)
Q Consensus 86 ~~~~~~~~~~~~-~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 164 (407)
+++...++..++ +++|++ |+|+++++.+++ ...+.+||+|++++|+|..+...++..|.+++.++. ++.++.+|
T Consensus 78 ~~~~~~~~~~~~~~~~i~i--t~G~~~al~~~~--~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~d 152 (391)
T PRK07309 78 DFVKEKYNLDYAPENEILV--TIGATEALSASL--TAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDT-TENDFVLT 152 (391)
T ss_pred HHHHHHhCCCCCCCCcEEE--eCChHHHHHHHH--HHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEec-CCcCCcCC
Confidence 999655555455 378999 999999999985 444789999999999999999999999999999998 34456899
Q ss_pred hhhHHHHHHcCC-CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCC
Q 015435 165 FQGLLEDLRAAP-SGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGG 243 (407)
Q Consensus 165 ~~~l~~~i~~~~-~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~ 243 (407)
++++++++.+.+ +++++++ ++||||||++++.+++++|+++|++||+++|+|++|.++.+++. ...++..+ ..+
T Consensus 153 ~~~l~~~~~~~~~~~~~i~l-~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~--~~~~~~~~--~~~ 227 (391)
T PRK07309 153 PEMLEKAILEQGDKLKAVIL-NYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGE--PHVSIAEY--LPD 227 (391)
T ss_pred HHHHHHHhhccCCCeEEEEE-ECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCC--CCCCHHHh--ccC
Confidence 999999987432 3566666 78999999999999999999999999999999999999987532 12233222 246
Q ss_pred cEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHH
Q 015435 244 ECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMAD 323 (407)
Q Consensus 244 ~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 323 (407)
++++++||||.||++|+|+||+ +++ +++ .+.+.........+++.+.|.++..++++.. ......++
T Consensus 228 ~~i~~~S~SK~~g~~GlRvG~~--v~~-~~~----~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~ 294 (391)
T PRK07309 228 QTILINGLSKSHAMTGWRIGLI--FAP-AEF----TAQLIKSHQYLVTAATTMAQFAAVEALTNGK------DDALPMKK 294 (391)
T ss_pred CEEEEecChhhccCccceeEEE--EeC-HHH----HHHHHHHHhhcccCCChHHHHHHHHHHhCCh------hHHHHHHH
Confidence 8999999999999999999999 565 444 4444433333344778888999999988653 22346778
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCC-------HHHHHHhHhhccEEEcCCC----------eEEecC
Q 015435 324 RIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN-------SEQVAFMTKEYHIYMTSDG----------RISMAG 386 (407)
Q Consensus 324 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~gi~~~~gg----------Ris~~~ 386 (407)
+++++++++.+.|++.+ +.+..|.+|+|.|+.+. .+.+.++++++||.+.||. ||+++.
T Consensus 295 ~~~~~~~~~~~~l~~~~----~~~~~p~gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~ 370 (391)
T PRK07309 295 EYIKRRDYIIEKMTDLG----FKIIKPDGAFYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAA 370 (391)
T ss_pred HHHHHHHHHHHHHHHCC----CeecCCCeeEEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC
Confidence 88899999999998876 77888899999997542 2345577788999998862 999986
Q ss_pred CCCCChhHHHHHHHHHHHhh
Q 015435 387 LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 387 ~~~e~i~~~~~~l~~~l~~~ 406 (407)
+.++++.++++|+++++++
T Consensus 371 -~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 371 -SMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred -CHHHHHHHHHHHHHHHHhh
Confidence 7789999999999999765
No 41
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-44 Score=342.17 Aligned_cols=343 Identities=19% Similarity=0.189 Sum_probs=270.3
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcc
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGT 110 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t 110 (407)
+++|+|+.|.+ .. +.+..+.+++...+. . ....|.+..|.+++|+++++++....+..+++++|++ |+|++
T Consensus 24 ~~~i~l~~g~~---~~-~~~~~~~~~~~~~~~--~-~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~--t~g~~ 94 (382)
T PRK06108 24 EGVLPLWFGES---DL-PTPDFIRDAAAAALA--D-GETFYTHNLGIPELREALARYVSRLHGVATPPERIAV--TSSGV 94 (382)
T ss_pred CCeEEecCCCC---CC-CCCHHHHHHHHHHHh--c-CCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEE--eCChH
Confidence 57999999986 32 445555555555554 2 2345988999999999999999655565677899999 99999
Q ss_pred cHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecC-CCCCcChhhHHHHHHcCCCCcEEEEecCCCC
Q 015435 111 GSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDP-ATRGLNFQGLLEDLRAAPSGAIVLLHACAHN 189 (407)
Q Consensus 111 ~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~N 189 (407)
+++.+++ ...+.+||+|++++|+|..+...++..|++++.+|++.+ .++.+|++++++.+. ++++++++ ++|||
T Consensus 95 ~al~~~~--~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~--~~~~~i~l-~~p~N 169 (382)
T PRK06108 95 QALMLAA--QALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAIT--PRTRALFI-NSPNN 169 (382)
T ss_pred HHHHHHH--HHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcC--ccceEEEE-ECCCC
Confidence 9999985 334779999999999999999999999999999998532 345689999999886 45667666 79999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEee
Q 015435 190 PTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVC 269 (407)
Q Consensus 190 PtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~ 269 (407)
|||.+++.+++++|+++|+++|+++|+||+|.++.+++. ....++..+....+++++++||||.|+++|+|+||+ ++
T Consensus 170 PtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~--~~ 246 (382)
T PRK06108 170 PTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPG-GRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWL--VA 246 (382)
T ss_pred CCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCC-CCCCCHhhcCCCcCCEEEEeechhhccCcccceeee--eC
Confidence 999999999999999999999999999999999987511 122232223333468999999999999999999999 56
Q ss_pred cChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc
Q 015435 270 KTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHII 349 (407)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 349 (407)
+ ++ +.+.+.........+++.+.|.++..++.+.. +++++.+++++++++++.+.|++.+. +.+..
T Consensus 247 ~-~~----~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~------~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~ 312 (382)
T PRK06108 247 P-PA----LGQVLEKLIEYNTSCVAQFVQRAAVAALDEGE------DFVAELVARLRRSRDHLVDALRALPG---VEVAK 312 (382)
T ss_pred C-HH----HHHHHHHHHHhcccCCChHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHHHHHhCCC---CcccC
Confidence 5 44 44444444333345678889999998887653 45678888999999999999988732 67778
Q ss_pred CCceeEEecCCC----H-HHHHHhHhhccEEEcCC--------C--eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 350 KQIGMFTFTGLN----S-EQVAFMTKEYHIYMTSD--------G--RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 350 ~~~~~~~~~~~~----~-~~~~~~l~~~gi~~~~g--------g--Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
|++|+|.|+.+. . +++..+++++||.+.|| + ||+++. ++++++.++++|++++++
T Consensus 313 p~~g~~~~~~l~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~~ 382 (382)
T PRK06108 313 PDGAMYAFFRIPGVTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR-DPARLDEAVERLRRFLAR 382 (382)
T ss_pred CCeeEEEEEeCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHhC
Confidence 899999998652 3 45567778899999885 1 999997 889999999999998764
No 42
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.3e-44 Score=342.34 Aligned_cols=368 Identities=16% Similarity=0.193 Sum_probs=287.6
Q ss_pred cccccccCCCCCchhhhhHhhh--hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHH
Q 015435 5 SVFGKIVRAPEDPILGVTVAYN--KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNK 82 (407)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~ 82 (407)
+|.+|+.+.+++++.++....+ ...+.++++|+.|.+ .. +.++.+.+++.+.+. .....|++..|.+++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~-~~~~~~~~~~~~~~~---~~~~~Y~~~~g~~~lr~ 75 (393)
T PRK05764 3 KLSKRVSRVTPSATLAVTAKAKELKAQGRDVISLGAGEP---DF-DTPEHIKEAAIEALD---DGKTKYTPAAGIPELRE 75 (393)
T ss_pred chhhhhhhcCchHHHHHHHHHHHHHhccCCEEEeCCCCC---CC-CCCHHHHHHHHHHHh---cCCCCcCCCCChHHHHH
Confidence 3677888888888766555443 233578999999986 33 444455555545553 22446988999999999
Q ss_pred HHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCC
Q 015435 83 LSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRG 162 (407)
Q Consensus 83 ~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ 162 (407)
++++++....+..+++++|++ |+|+++++.+++ ...+.+||.|++++|+|..+..+++.+|.+++.++++.+.++.
T Consensus 76 ~ia~~~~~~~~~~~~~~~i~~--~~g~~~a~~~~~--~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 151 (393)
T PRK05764 76 AIAAKLKRDNGLDYDPSQVIV--TTGAKQALYNAF--MALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFK 151 (393)
T ss_pred HHHHHHHHHhCCCCCHHHEEE--eCCcHHHHHHHH--HHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCc
Confidence 999999554455567799999 999999999884 4447899999999999999999999999999999985344577
Q ss_pred cChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHH-HHc
Q 015435 163 LNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMF-VAD 241 (407)
Q Consensus 163 ~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~-~~~ 241 (407)
+|++++++.+. ++++++++ ++|+||||.+++.+++++|+++|++||+++|+|++|.++.+++. ...++..+ .+.
T Consensus 152 ~d~~~l~~~l~--~~~~~v~~-~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~ 226 (393)
T PRK05764 152 LTVEQLEAAIT--PKTKALIL-NSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGA--EFTSIASLSPEL 226 (393)
T ss_pred CCHHHHHHhhC--ccceEEEE-ECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCC--CcccHHHcCCCC
Confidence 89999999886 56677666 89999999999999999999999999999999999999887532 11233322 233
Q ss_pred CCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHH
Q 015435 242 GGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAM 321 (407)
Q Consensus 242 ~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 321 (407)
.+++++++||||.++++|+|+||+ +++ ++ +...+.........+++.+.|.++..+++... ++++++
T Consensus 227 ~~~~i~~~s~SK~~~~~G~RiG~i--~~~-~~----~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~ 293 (393)
T PRK05764 227 RDRTITVNGFSKAYAMTGWRLGYA--AGP-KE----LIKAMSKLQSHSTSNPTSIAQYAAVAALNGPQ------DEVEEM 293 (393)
T ss_pred cCCEEEEecCcccccCccceeEEE--ecC-HH----HHHHHHHHHhhcccCCChHHHHHHHHHHcCCh------HHHHHH
Confidence 468999999999999999999999 444 44 44445445544555788889999888887321 556778
Q ss_pred HHHHHHHHHHHHHHHHhc-CCCCCcccccCCceeEEecCCC----------HHHHHHhHhhccEEEcCCC--------eE
Q 015435 322 ADRIISMRQQLFDALSAR-GTPGDWSHIIKQIGMFTFTGLN----------SEQVAFMTKEYHIYMTSDG--------RI 382 (407)
Q Consensus 322 ~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~gi~~~~gg--------Ri 382 (407)
+++++++++.+.+.|++. + +.+..|.+++|.|+.+. .++...+++++||.+.+|. ||
T Consensus 294 ~~~~~~~~~~l~~~L~~~~g----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRi 369 (393)
T PRK05764 294 RQAFEERRDLMVDGLNEIPG----LECPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRL 369 (393)
T ss_pred HHHHHHHHHHHHHHHhhCCC----CcccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEE
Confidence 888999999999999987 5 67778889999987542 3445677788999999862 99
Q ss_pred EecCCCCCChhHHHHHHHHHHHhh
Q 015435 383 SMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 383 s~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
+++. +++++++++++|.++++++
T Consensus 370 s~~~-~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 370 SYAT-SLEDLEEGLERIERFLESL 392 (393)
T ss_pred EecC-CHHHHHHHHHHHHHHHHhh
Confidence 9986 8899999999999998865
No 43
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=6.4e-44 Score=340.59 Aligned_cols=358 Identities=15% Similarity=0.155 Sum_probs=269.3
Q ss_pred cccCCCCCchhhhhHhhh---hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHH
Q 015435 9 KIVRAPEDPILGVTVAYN---KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSA 85 (407)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~---~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a 85 (407)
++...+.+.+......+. +.++.+.++|+.|.+ .. +.|+.+.+++.+.+. ....|+++.|.+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p---~~-~~~~~~~~a~~~~~~----~~~~Y~~~~G~~~lr~aia 74 (393)
T TIGR03538 3 NLSRLQPYPFEKLAALLAGVTPPASKPPIALSIGEP---KH-PTPAFVLEALRENLH----GLSTYPTTKGLPELRQAIA 74 (393)
T ss_pred hhhhCCccHHHHHHHHHHhhhhhcCCCeEEecCCCC---CC-CCCHHHHHHHHHHhh----ccCCCCCCCCCHHHHHHHH
Confidence 344455555555444443 235689999999986 32 334444444444432 3577999999999999999
Q ss_pred HHHhCCCCCC--CCCC-ceEEeecCCcccHHHHHHHHHHhhcCCCe--EEecCCCCCChHHHHhhcCceeeEEEeecCCC
Q 015435 86 KLILGADSPA--IKDN-RVTTVQCLSGTGSLRVGAEFLARHYHQLT--IYIPQPTWGNHPKVFTLAGLSVKTYRYYDPAT 160 (407)
Q Consensus 86 ~~~~~~~~~~--~~~~-~i~~~~t~g~t~a~~~~~~~~~~~~~gd~--Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~ 160 (407)
+++...++.. ++++ +|++ |+|+++++.+++. ..+.+||. |++++|+|..|...++..|.+++.++++++.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~i~i--t~Ga~~al~~~~~--~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~ 150 (393)
T TIGR03538 75 RWLERRFDLPTGVDPERHVLP--VNGTREALFAFAQ--AVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENG 150 (393)
T ss_pred HHHHHhhCCcccCCCCceEEE--CCCcHHHHHHHHH--HHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCC
Confidence 9996554443 5664 7999 9999999999853 34779986 99999999999999999999999999954445
Q ss_pred CCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHH-HHHH
Q 015435 161 RGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSV-RMFV 239 (407)
Q Consensus 161 ~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~-~~~~ 239 (407)
+.+|++++++++. ++++++++ ++||||||.+++.+++++|+++|++||++||+||+|.++.+++.. ...+. ..+.
T Consensus 151 ~~~d~~~l~~~~~--~~~k~i~l-~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~-~~~~~~~~~~ 226 (393)
T TIGR03538 151 FLPDFDAVPESVW--RRCQLLFV-CSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGN-PPAGLLQAAA 226 (393)
T ss_pred CCCCHHHHHHHHh--hcceEEEE-eCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCC-CCcCHHHhcc
Confidence 7789999999886 45677777 899999999999999999999999999999999999999875311 11111 1111
Q ss_pred ----HcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHH
Q 015435 240 ----ADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWT 315 (407)
Q Consensus 240 ----~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 315 (407)
...+++++++||||.|+++|+|+||+ +++ ++ +...+.........+++.+.|.++...+.+.
T Consensus 227 ~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~--i~~-~~----l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~------- 292 (393)
T TIGR03538 227 QLGRDDFRRCLVFHSLSKRSNLPGLRSGFV--AGD-AE----ILKAFLRYRTYHGCAMPIPTQLASIAAWNDE------- 292 (393)
T ss_pred cccccccccEEEEecchhhcCCcccceEEE--ecC-HH----HHHHHHHHHHhhccCcCHHHHHHHHHHhcCh-------
Confidence 12468999999999999999999999 565 44 4444444444334467788888887777543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCC--H-HHHHHhHhhccEEEcCC------------C
Q 015435 316 LELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN--S-EQVAFMTKEYHIYMTSD------------G 380 (407)
Q Consensus 316 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~l~~~gi~~~~g------------g 380 (407)
+++++.++.++++++.+.+.|++. +.+..|.+|+|.|+.+. . +++..+++++||.+.|| +
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~L~~~-----~~~~~p~gg~f~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~ 367 (393)
T TIGR03538 293 QHVRENRALYREKFAAVLEILGQV-----LDLELPDAGFYLWPKVPGDDEAFARALYEEENVTVLPGRFLAREAEGVNPG 367 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-----CcccCCCeeEEEEEECCCCHHHHHHHHHHHCCEEEeCCccccccccCCCCC
Confidence 557788889999999999999764 24457889999999764 3 34556677799999654 1
Q ss_pred ----eEEecCCCCCChhHHHHHHHHH
Q 015435 381 ----RISMAGLSSKTVPHLTDAIHAA 402 (407)
Q Consensus 381 ----Ris~~~~~~e~i~~~~~~l~~~ 402 (407)
||+++. ++++++.++++|+++
T Consensus 368 ~~~~Ris~~~-~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 368 EGRVRIALVA-PLEECVEAAERIRSF 392 (393)
T ss_pred CCEEEEEecC-CHHHHHHHHHHHHHh
Confidence 899986 789999999999875
No 44
>PRK07324 transaminase; Validated
Probab=100.00 E-value=1.5e-44 Score=341.83 Aligned_cols=334 Identities=16% Similarity=0.114 Sum_probs=270.1
Q ss_pred CCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCC
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLS 108 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g 108 (407)
.++++++|+.|.+ +. +.|... ++...++. ....+|++..|.+++|+++++++.+ +++++|++ |+|
T Consensus 24 ~~~~~~~~~~~e~---~~-~~~~~~-~~~~~~~~---~~~~~Y~~~~G~~~lr~~ia~~~~~-----~~~~~vi~--t~G 88 (373)
T PRK07324 24 AESCIDSLTLEEL---LA-LAGKNP-EAFYQELG---QKKLTYGWIEGSPEFKEAVASLYQN-----VKPENILQ--TNG 88 (373)
T ss_pred ccCCCCCCcHHHH---Hh-ccCcch-HHHHHHHh---cCCccCCCCCCCHHHHHHHHHHhcC-----CChhhEEE--cCC
Confidence 4689999999987 33 445555 66666665 2345799999999999999999832 44689999 999
Q ss_pred cccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCC
Q 015435 109 GTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAH 188 (407)
Q Consensus 109 ~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~ 188 (407)
+++++.+++ ...+.+||+|+++.|+|..+...++..|.+++.+|+..+.++.+|++++++.+. ++++++++ ++||
T Consensus 89 ~~~al~~~~--~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~--~~~kli~i-~~p~ 163 (373)
T PRK07324 89 ATGANFLVL--YALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVR--PNTKLICI-NNAN 163 (373)
T ss_pred hHHHHHHHH--HHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCC--CCCcEEEE-eCCC
Confidence 999999985 444789999999999999999999999999999999544456789999998876 56777766 8999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEe
Q 015435 189 NPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIV 268 (407)
Q Consensus 189 NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v 268 (407)
||||.+++.+++++|+++|++||+++|+||+|.++.+++ +..++ ....+++|+++||||.||++|+|+||+ +
T Consensus 164 NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~---~~~s~---~~~~~~~I~~~s~SK~~~~~G~RiG~i--~ 235 (373)
T PRK07324 164 NPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDG---STPSI---ADLYEKGISTNSMSKTYSLPGIRVGWI--A 235 (373)
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC---CCCCh---hhccCCEEEEecchhhcCCccceeEEE--e
Confidence 999999999999999999999999999999999988753 12222 223467899999999999999999999 5
Q ss_pred ecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc
Q 015435 269 CKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHI 348 (407)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 348 (407)
++ + .+...+...+.....+++.+.|.++..++++.+ ..+++.++.++++++.+.+.|.+.+. +.+.
T Consensus 236 ~~-~----~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~~------~~l~~~~~~~~~~~~~l~~~l~~~~~---~~~~ 301 (373)
T PRK07324 236 AN-E----EVIDILRKYRDYTMICAGVFDDMLASLALEHRD------AILERNRKIVRTNLAILDEWVAKEPR---VSYV 301 (373)
T ss_pred cC-H----HHHHHHHHHhCcEEecCChHHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHHHHHHhcCCC---ceEE
Confidence 65 4 455555555555555778888988888887542 56778889999999999999987642 6677
Q ss_pred cCCceeEEecCC----C-HHHHHHhHhhccEEEcCCC--------eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 349 IKQIGMFTFTGL----N-SEQVAFMTKEYHIYMTSDG--------RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 349 ~~~~~~~~~~~~----~-~~~~~~~l~~~gi~~~~gg--------Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
.|.+|++.|+.+ + .+++.++++++||.+.||. ||+++. +++.+++++++|++++++
T Consensus 302 ~p~gg~~~~i~~~~~~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~-~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 302 KPKAVSTSFVKLDVDMPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCC-DTETLKKGLKKLSEFLRE 370 (373)
T ss_pred CCCceEEEEEEeCCCCCHHHHHHHHHHhcCEEEECccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 888888766633 3 3467788888999999983 999996 788999999999999875
No 45
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=6.5e-44 Score=342.04 Aligned_cols=366 Identities=16% Similarity=0.168 Sum_probs=278.8
Q ss_pred CchhhhhHhhhh-cCCCCeeeeeeeeeecC-CCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCC--
Q 015435 16 DPILGVTVAYNK-DTSPVKLNLGVGAYRTE-EGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGA-- 91 (407)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~i~l~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~-- 91 (407)
.++.+...++.. ..++++|+|+.|.|... +. ..+..+.+++.+.+. .....+|++..|.++||+++++++...
T Consensus 17 ~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~-~p~~~~~~a~~~~~~--~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~ 93 (412)
T PTZ00433 17 NPLRTVTDNAKPSPSPKSIIKLSVGDPTLDGNL-LTPAIQTKALVEAVD--SQECNGYPPTVGSPEAREAVATYWRNSFV 93 (412)
T ss_pred ccHHHHHHhhccCCCCCCeeecCCcCCCCcCCC-CCCHHHHHHHHHHhh--cCCCCCCCCCCCcHHHHHHHHHHHHhhcc
Confidence 345555556653 46789999999987210 11 224444444444443 234567988889999999999999532
Q ss_pred ----CCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhh
Q 015435 92 ----DSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQG 167 (407)
Q Consensus 92 ----~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~ 167 (407)
.+..+++++|++ |+|+++++.+++. ..+.+||+|+++.|+|..+...++..|++++.+++..+.++++|+++
T Consensus 94 ~~~~~~~~~~~~~i~i--t~G~~~al~~~~~--~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~ 169 (412)
T PTZ00433 94 HKESLKSTIKKDNVVL--CSGVSHAILMALT--ALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDE 169 (412)
T ss_pred ccccccCCCChhhEEE--eCChHHHHHHHHH--HhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHH
Confidence 234577899999 9999999999953 34779999999999999999999999999999998544467899999
Q ss_pred HHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEE
Q 015435 168 LLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLV 247 (407)
Q Consensus 168 l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~ 247 (407)
+++.+. ++++++++ ++||||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+. ...++++
T Consensus 170 l~~~~~--~~~~~i~~-~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~-~~~~~i~ 243 (412)
T PTZ00433 170 IRRLVD--DRTKALIM-TNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGA--TFTSVADFD-TTVPRVI 243 (412)
T ss_pred HHHHhc--cCceEEEE-eCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCC--Cccchhhcc-CCCceEE
Confidence 998886 45677766 89999999999999999999999999999999999999987642 122333332 1235799
Q ss_pred EEecCccccccCCCcceeEEeecChh-hHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHH
Q 015435 248 AQSYAKNMGLYGERVGALSIVCKTED-VASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRII 326 (407)
Q Consensus 248 ~~s~sK~~~~~G~r~G~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (407)
++||||.|+++|+|+||+ ++.+++ ..+.+...+..... ...+++.+.|.++..++.+.. ..++++.+++++
T Consensus 244 ~~SfSK~~~~pGlRlG~~--i~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~-----~~~~~~~~~~~~ 315 (412)
T PTZ00433 244 LGGTAKNLVVPGWRLGWL--LLVDPHGNGGDFLDGMKRLGM-LVCGPCSVVQAALGEALLNTP-----QEHLEQIVAKLE 315 (412)
T ss_pred EccchhhcCCCCeeEEEE--EEeCCcccHHHHHHHHHHHhh-ccCCCChHHHHHHHHHHhcCc-----HHHHHHHHHHHH
Confidence 999999999999999999 553321 12334554544432 234788889999988887521 256788889999
Q ss_pred HHHHHHHHHHHhcCCCCCcccccCCceeEEecCCC----------HHHHHHhHhhccEEEcCCC--------eEEecCCC
Q 015435 327 SMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN----------SEQVAFMTKEYHIYMTSDG--------RISMAGLS 388 (407)
Q Consensus 327 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~gi~~~~gg--------Ris~~~~~ 388 (407)
++++.+.+.|++... +.+..|.+|+|.|+.++ .+++..+++++||.+.||. ||+++. +
T Consensus 316 ~~r~~l~~~L~~~~~---~~~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~-~ 391 (412)
T PTZ00433 316 EGAMVLYNHIGECIG---LSPTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR-P 391 (412)
T ss_pred HHHHHHHHHHhcCCC---CcccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecC-C
Confidence 999999999987532 67778999999997552 2456677777899999973 999986 6
Q ss_pred CCChhHHHHHHHHHHHhh
Q 015435 389 SKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 389 ~e~i~~~~~~l~~~l~~~ 406 (407)
++++++++++|.+++++.
T Consensus 392 ~e~l~~al~~l~~~~~~~ 409 (412)
T PTZ00433 392 VEVLREAVERIKAFCERH 409 (412)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 788999999999998753
No 46
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=1.1e-43 Score=339.00 Aligned_cols=366 Identities=17% Similarity=0.239 Sum_probs=277.4
Q ss_pred cccccCCCCCchhhhhHhhh---hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHH
Q 015435 7 FGKIVRAPEDPILGVTVAYN---KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKL 83 (407)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ 83 (407)
|+++...+++ .+...+... .+.++++++|+.|.| ++ +.++...+++.+.+. ......|++..|.+++|++
T Consensus 3 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~~g~p---~~-~~~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lr~a 75 (395)
T PRK08175 3 FTRIDRLPPY-VFNITAELKMAARRRGEDIIDFSMGNP---DG-PTPPHIVEKLCEVAQ--RPDTHGYSTSRGIPRLRRA 75 (395)
T ss_pred cchhhcCCch-HHHHHHHHHHHHHhcCCCeEEcCCCCC---CC-CCCHHHHHHHHHHHh--CCCcCCCCCCCCCHHHHHH
Confidence 4455444433 443333332 234578999999976 44 445556666666654 2345779999999999999
Q ss_pred HHHHHhCCCCCCCCCC-ceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCC
Q 015435 84 SAKLILGADSPAIKDN-RVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRG 162 (407)
Q Consensus 84 ~a~~~~~~~~~~~~~~-~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ 162 (407)
+++++...++..++++ ++++ |+|+++++.++. ...+.+||+|++++|+|+.+...++..|.+++.++++ ++ +
T Consensus 76 ia~~~~~~~g~~~~~~~~i~~--t~G~~~~l~~~~--~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~-~~--~ 148 (395)
T PRK08175 76 ISRWYQDRYDVDIDPESEAIV--TIGSKEGLAHLM--LATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLV-EG--V 148 (395)
T ss_pred HHHHHHHHhCCCCCCCCcEEE--ccCcHHHHHHHH--HHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecc-cC--C
Confidence 9999965556666666 7999 999999999884 3447899999999999999999999999999999984 22 2
Q ss_pred cChhhHHHHHHcC-CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHc
Q 015435 163 LNFQGLLEDLRAA-PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVAD 241 (407)
Q Consensus 163 ~d~~~l~~~i~~~-~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~ 241 (407)
.+++++++++.+. ++++++++ ++||||||.+++.+++++|+++|++||+++|+||+|.++.+++.. ..++..+...
T Consensus 149 ~~~~~l~~~l~~~~~~~~~v~i-~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~--~~~~~~~~~~ 225 (395)
T PRK08175 149 DFFNELERAIRESYPKPKMMIL-GFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWK--APSIMQVPGA 225 (395)
T ss_pred CcHHHHHHHHhhccCCceEEEE-eCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCC--CcchhcCCCc
Confidence 3478888877643 34566666 799999999999999999999999999999999999998875421 2232222222
Q ss_pred CCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHH
Q 015435 242 GGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAM 321 (407)
Q Consensus 242 ~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 321 (407)
.+.+++++||||.||+||+|+||+ ++ ++++.+ .+.........+++.+.|.++..++.+.. ++++++
T Consensus 226 ~~~~i~~~S~SK~~g~pGlRiG~~--~~-~~~l~~----~~~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~ 292 (395)
T PRK08175 226 KDVAVEFFTLSKSYNMAGWRIGFM--VG-NPELVS----ALARIKSYHDYGTFTPLQVAAIAALEGDQ------QCVRDI 292 (395)
T ss_pred ccCEEEEeeccccccCcchhheee--eC-CHHHHH----HHHHHHhhcccCCCcHHHHHHHHHHhCcH------HHHHHH
Confidence 456889999999999999999999 45 455444 44444443344667778888888886532 567888
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCC--------HHHHHHhHhhccEEEcCCC----------eEE
Q 015435 322 ADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN--------SEQVAFMTKEYHIYMTSDG----------RIS 383 (407)
Q Consensus 322 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~gi~~~~gg----------Ris 383 (407)
++.++++++++.+.|+..+ +.+..|.+|+|.|+.+. .+++..+++++||.+.||. ||+
T Consensus 293 ~~~~~~~~~~~~~~L~~~~----~~~~~p~~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis 368 (395)
T PRK08175 293 AEQYKRRRDVLVKGLHEAG----WMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFA 368 (395)
T ss_pred HHHHHHHHHHHHHHHHHcC----CcccCCCEEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEE
Confidence 9999999999999999886 67777889999999653 2345567778999999961 999
Q ss_pred ecCCCCCChhHHHHHHHHHHHhhC
Q 015435 384 MAGLSSKTVPHLTDAIHAAVTRMG 407 (407)
Q Consensus 384 ~~~~~~e~i~~~~~~l~~~l~~~~ 407 (407)
++. +++.++.++++|++++++.|
T Consensus 369 ~~~-~~~~~~~al~~l~~~l~~~~ 391 (395)
T PRK08175 369 LIE-NRDRIRQAIRGIKAMFRADG 391 (395)
T ss_pred eCC-CHHHHHHHHHHHHHHHHhcC
Confidence 984 78999999999999998754
No 47
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-43 Score=309.32 Aligned_cols=367 Identities=13% Similarity=0.143 Sum_probs=297.4
Q ss_pred CchhhhhHhhh----hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCC
Q 015435 16 DPILGVTVAYN----KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGA 91 (407)
Q Consensus 16 ~~~~~~~~~~~----~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~ 91 (407)
..+++....+. ....+.+|.++.|.|..-.-.+..+...+++.+++. .+...+|+|..|+...|+++|++++..
T Consensus 42 ~tir~i~~~l~~~~~p~~~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~--Sgk~N~Yaps~G~~~AR~AVAeYl~~~ 119 (447)
T KOG0259|consen 42 VTIRGILSALFDCCDPEKKKPILPLGHGDPSVYPCFRTSQEAEQAVVDALR--SGKGNGYAPSVGILPARRAVAEYLNRD 119 (447)
T ss_pred ccHHHHHHHHhhcCCcccCceeccCCCCCCCccccccCCHHHHHHHHHHHh--cCCCCCcCCccccHHHHHHHHHHhhcC
Confidence 34555554443 222348899999987321122335566777777776 566788999999999999999998777
Q ss_pred CCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHH
Q 015435 92 DSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLED 171 (407)
Q Consensus 92 ~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~ 171 (407)
....+++++|++ |+|.++|+++++.. +..+|..|++|.|+|+.|...+...|+.++++++-.+.+|.+|++.++..
T Consensus 120 l~~kl~a~DV~l--tsGC~qAIe~~i~~--LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal 195 (447)
T KOG0259|consen 120 LPNKLTADDVVL--TSGCSQAIELAISS--LANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEAL 195 (447)
T ss_pred CCCccCcCceEE--eccchHHHHHHHHH--hcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHh
Confidence 777889999999 99999999999544 46799999999999999999999999999999987677899999999999
Q ss_pred HHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEec
Q 015435 172 LRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSY 251 (407)
Q Consensus 172 i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 251 (407)
++ ++|.+++| .||+||+|.+++.+.|++|+++|+|+++.+|.||+|.+++|++. +..++..+. .--.++.++|.
T Consensus 196 ~D--ENT~Aivv-iNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~--pfvpmg~fs-siVPVitlggi 269 (447)
T KOG0259|consen 196 AD--ENTVAIVV-INPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDK--PFVPMGKFS-SIVPVITLGGI 269 (447)
T ss_pred hc--cCeeEEEE-eCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCC--Cccchhhcc-ccCceEeeccc
Confidence 98 67888888 89999999999999999999999999999999999999999864 445555442 24578999999
Q ss_pred CccccccCCCcceeEEeecChh--hHH-HHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHH
Q 015435 252 AKNMGLYGERVGALSIVCKTED--VAS-RVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISM 328 (407)
Q Consensus 252 sK~~~~~G~r~G~~~~v~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 328 (407)
||-|-.||||+||+ +..|+. +.+ .....+..+.+ ....|.++.|.|.-..|..-. +++.+.....++.+
T Consensus 270 sKrW~VPGWRlGWi--~~hD~~gvf~~~~~~q~~~~~~~-~~~~p~TiiQ~AlP~IL~kTp-----~efF~k~~~~lk~n 341 (447)
T KOG0259|consen 270 SKRWIVPGWRLGWI--ALHDPRGVFRDTKVVQGIKNFLD-IIPGPATIIQGALPDILEKTP-----EEFFDKKLSFLKSN 341 (447)
T ss_pred ccccccCCceeeeE--EEecccccccchHHHHHHHHHHh-ccCCccHhHHHHhHHHHHhCh-----HHHHHHHHHHHHhh
Confidence 99999999999999 455543 111 11223333322 234889999999999998643 26788888999999
Q ss_pred HHHHHHHHHhcCCCCCcc-cccCCceeEEecCC----------CHHHHHHhHhhccEEEcCCC--------eEEecCCCC
Q 015435 329 RQQLFDALSARGTPGDWS-HIIKQIGMFTFTGL----------NSEQVAFMTKEYHIYMTSDG--------RISMAGLSS 389 (407)
Q Consensus 329 ~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~----------~~~~~~~~l~~~gi~~~~gg--------Ris~~~~~~ 389 (407)
.+...+.|.+++. +. ...|.|.+|.|+++ +.++...+.+|..+.+.||. |+++.. +.
T Consensus 342 a~l~y~~Lk~IP~---l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~-~~ 417 (447)
T KOG0259|consen 342 ADLCYSRLKDIPC---LTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITV-EE 417 (447)
T ss_pred HHHHHHHHhcCCC---cccCcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEcc-Ch
Confidence 9999999999874 55 77999999999966 45788999999999999983 999995 88
Q ss_pred CChhHHHHHHHHHHHhh
Q 015435 390 KTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 390 e~i~~~~~~l~~~l~~~ 406 (407)
+.+++++.||+++.++.
T Consensus 418 ~~leea~~Rik~Fc~RH 434 (447)
T KOG0259|consen 418 EMLEEAFSRIKEFCDRH 434 (447)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999998763
No 48
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=6.7e-43 Score=332.63 Aligned_cols=359 Identities=20% Similarity=0.294 Sum_probs=273.0
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCC---CCceEEeecC
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIK---DNRVTTVQCL 107 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~---~~~i~~~~t~ 107 (407)
.+.+|.++|...+..+ |.+.+.+.++..... .....+|+++.|.+++|+.+++++..... ... .++|++ |+
T Consensus 3 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~i--t~ 76 (388)
T PRK08637 3 ATKYNATIGMATEKGG-PMYLSSLQDLLNDLT--PDEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIV--TN 76 (388)
T ss_pred ccceecceeeEecCCC-cchHHHHHHHHHhhc--cccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeE--cc
Confidence 4788999998855444 777777777776653 34577899999999999999999865432 222 267899 99
Q ss_pred CcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHh-hcCceeeEEEeecCCCCCcChhhHHHHHHc-CCCCcEEEEec
Q 015435 108 SGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFT-LAGLSVKTYRYYDPATRGLNFQGLLEDLRA-APSGAIVLLHA 185 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~-~~~~~~v~i~~ 185 (407)
|+++++.++... .+.+||+|++++|+|+.|...+. ..|.+++.+|+. .+++++|++++++.+.. .++.+.+++++
T Consensus 77 G~~~al~~~~~~--l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~-~~~~~~d~~~l~~~~~~~~~~~~~~~~~~ 153 (388)
T PRK08637 77 ALTHGLSLVADL--FVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIF-DEDGGFDTDALKEALQAAYNKGKVIVILN 153 (388)
T ss_pred chHHHHHHHHHH--hcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEeccc-CCCCcCCHHHHHHHHHhhccCCCEEEEEe
Confidence 999999998533 36799999999999999998765 689999999983 23468999999998761 12345556669
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHH-----cCceeeeccccccccCCCCCchhHHH-HHHHHcCCcE--EEEEecCccccc
Q 015435 186 CAHNPTGVDPTLEQWEQIRQLMRS-----KGLLPFFDSAYQGFASGSLDADAQSV-RMFVADGGEC--LVAQSYAKNMGL 257 (407)
Q Consensus 186 ~p~NPtG~~~~~~~l~~i~~~~~~-----~~~~li~D~~y~~~~~~~~~~~~~~~-~~~~~~~~~~--i~~~s~sK~~~~ 257 (407)
+||||||.+++.+++++|+++|++ |+++||+||+|.++.+++. ...++ ..+.+..+++ ++++|+||.+++
T Consensus 154 ~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~--~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~ 231 (388)
T PRK08637 154 FPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDS--YKESLFAALANLHSNILAVKLDGATKEEFV 231 (388)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCc--cchhhHHHhhcccccceEEEeccccccCCC
Confidence 999999999999999999999886 8999999999999988653 22222 2222334564 455699999999
Q ss_pred cCCCcceeEEeec-----ChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHH
Q 015435 258 YGERVGALSIVCK-----TEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQL 332 (407)
Q Consensus 258 ~G~r~G~~~~v~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 332 (407)
||+|+||+ +++ ++++.+.+...+....+....+++.+.|.++..++++.. |.++..+.++.++++++.+
T Consensus 232 pGlRlG~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~----~~~~~~~~~~~~~~r~~~~ 305 (388)
T PRK08637 232 WGFRVGFI--TFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPE----FDKEKQEKFQILKERYEKT 305 (388)
T ss_pred cccceEEE--EEccccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHH
Confidence 99999999 454 356665555433222222334788999999999998763 4566677778899999999
Q ss_pred HHHHHhcCCCCCcccccCCceeEEecCCCH----HHHHHhHhhccEEEcCCC----eEEecCCCCCChhHHHHHHHHHHH
Q 015435 333 FDALSARGTPGDWSHIIKQIGMFTFTGLNS----EQVAFMTKEYHIYMTSDG----RISMAGLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 333 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~gi~~~~gg----Ris~~~~~~e~i~~~~~~l~~~l~ 404 (407)
.+.++..+.+..+.+.++.+|+|.|+.+.. +++..+++++||.+.+.+ ||+++..++++++.++++|+++++
T Consensus 306 ~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~l~~~l~~~~gv~~~~~~~~~iRi~~~~~~~~~i~~~~~~l~~~~~ 385 (388)
T PRK08637 306 KEVLYDGKYDDAWQAYPFNSGYFMCLKLKGVDAEELRVHLLEKYGIGTIALNETDLRIAFSCVEEEDIPELFDSIYKAIK 385 (388)
T ss_pred HHHHHhhCCCCCcccccccceEEEEecCChHHHHHHHHHHhhhcceEEEeccCCceEEEeecCCHHHHHHHHHHHHHHHH
Confidence 998876532223677888999999997742 334566677899887643 999987788999999999999987
Q ss_pred hh
Q 015435 405 RM 406 (407)
Q Consensus 405 ~~ 406 (407)
.+
T Consensus 386 ~~ 387 (388)
T PRK08637 386 DL 387 (388)
T ss_pred hc
Confidence 65
No 49
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=3.4e-43 Score=341.08 Aligned_cols=346 Identities=16% Similarity=0.193 Sum_probs=265.0
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHH-Hh----c-----cccccccCCCCCCcHHHHHHHHHHHhCCCC--CCCCC
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQL-LV----N-----DQSRVKEYLPIVGLVDFNKLSAKLILGADS--PAIKD 98 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~-~~----~-----~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~--~~~~~ 98 (407)
..+|+|+..+ + +...+.+...+.. .. . ...+...|.+..|.+++|+++|+++...++ ..+++
T Consensus 46 ~g~i~l~~aE----N--~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~p 119 (496)
T PLN02376 46 HGIIQMGLAE----N--QLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDP 119 (496)
T ss_pred CceEEeecch----h--hhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCCh
Confidence 4799999875 2 4433333322221 11 0 112345688889999999999999965444 45778
Q ss_pred CceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHh-hcCceeeEEEeecCCCCCcChhhHHHHHHc---
Q 015435 99 NRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFT-LAGLSVKTYRYYDPATRGLNFQGLLEDLRA--- 174 (407)
Q Consensus 99 ~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~--- 174 (407)
++|++ |+|+++++++++ ...+.+||.|++++|+|+.+...+. ..|++++.+++...++++++++.+++++..
T Consensus 120 e~Ivi--t~Ga~~al~~l~--~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~ 195 (496)
T PLN02376 120 ERVVM--SGGATGANETIM--FCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQE 195 (496)
T ss_pred hhEEE--ccchHHHHHHHH--HHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHh
Confidence 99999 999999999995 4457899999999999999999888 589999999995445678999999876532
Q ss_pred -CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHc-------CCcEE
Q 015435 175 -APSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVAD-------GGECL 246 (407)
Q Consensus 175 -~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~-------~~~~i 246 (407)
..+.+++++ ++||||||++++.+++++|+++|++||++||+||+|.++.+.+. +..++..+... .+.++
T Consensus 196 ~~~~~k~l~l-~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~--~~~si~~l~~~~~~~~~~~~~v~ 272 (496)
T PLN02376 196 SNKKVKGLIL-TNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGG--DFVSVAEVVNDVDISEVNVDLIH 272 (496)
T ss_pred cCCCeeEEEE-cCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCC--CcccHHHhhccccccccCCCeEE
Confidence 134566666 89999999999999999999999999999999999999987643 23344333221 13567
Q ss_pred EEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHH
Q 015435 247 VAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRII 326 (407)
Q Consensus 247 ~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (407)
+++||||.||+||+|+||+ +++++.+.+. +..... ....+.+.|.++..++++.... .+++.+.+++++
T Consensus 273 vv~S~SK~~glpGlRvG~l--i~~~~~l~~~----~~~~~~--~~~vs~~~Q~a~~~~L~d~~~~---~~~l~~~r~~l~ 341 (496)
T PLN02376 273 IVYSLSKDMGLPGFRVGIV--YSFNDSVVSC----ARKMSS--FGLVSSQTQLMLASMLSDDQFV---DNFLMESSRRLG 341 (496)
T ss_pred EEEeccccCCCCcceEEEE--EECCHHHHHH----HHHHhh--cCCCCHHHHHHHHHHhCChhHH---HHHHHHHHHHHH
Confidence 8999999999999999999 6765554333 222222 2357888999999999876421 356778889999
Q ss_pred HHHHHHHHHHHhcCCCCCcccccCCceeEEecCCC------------HHHHHHhHhhccEEEcCCC----------eEEe
Q 015435 327 SMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN------------SEQVAFMTKEYHIYMTSDG----------RISM 384 (407)
Q Consensus 327 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~~~gi~~~~gg----------Ris~ 384 (407)
++++.+.+.|++.+ +.+..+.+|+|+|+++. .++...+++++||.+.||. ||++
T Consensus 342 ~r~~~l~~~L~~~g----i~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~f 417 (496)
T PLN02376 342 IRHKVFTTGIKKAD----IACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICF 417 (496)
T ss_pred HHHHHHHHHHHHCC----CcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEe
Confidence 99999999999877 67788899999999762 1234456777899999972 9999
Q ss_pred cCCCCCChhHHHHHHHHHHH
Q 015435 385 AGLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 385 ~~~~~e~i~~~~~~l~~~l~ 404 (407)
+..+++.++.++++|+++++
T Consensus 418 a~~~~~~l~~al~rl~~~l~ 437 (496)
T PLN02376 418 ANMDDDTLHVALGRIQDFVS 437 (496)
T ss_pred eCCCHHHHHHHHHHHHHHHH
Confidence 97677899999999999885
No 50
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-43 Score=337.10 Aligned_cols=364 Identities=17% Similarity=0.157 Sum_probs=277.3
Q ss_pred cccccCCCCCchhhhhHhhh--hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHH
Q 015435 7 FGKIVRAPEDPILGVTVAYN--KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLS 84 (407)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~ 84 (407)
.+|+....+.++.++.+.+. .+.+...|+|+.|.+ .. +.+....+...+.+. ......|.+..|.+++|+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~---~~-~~~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lr~~i 76 (386)
T PRK07550 3 NPLIAALFPPPIPEVRAWLAGYDGADGPLIDLSQAVP---GY-PPPPELLRALAEAAA--DPAAHLYGPVEGLPELREAY 76 (386)
T ss_pred chhhhhcCChHHHHHHHHHHHHhhcCCCeEEeCCCCC---CC-CCCHHHHHHHHHHHh--CcCCcCCCCCCCCHHHHHHH
Confidence 35566666667777665544 234678999999986 22 333344443333333 23456798889999999999
Q ss_pred HHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcC
Q 015435 85 AKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLN 164 (407)
Q Consensus 85 a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 164 (407)
++++....+..+++++|++ |+|+++++.+++.. .+.+||+|++++|+|..+...++..|++++.++++.+.++.+|
T Consensus 77 a~~~~~~~g~~~~~~~i~~--t~G~~~al~~~~~~--l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~ 152 (386)
T PRK07550 77 AAHYSRLYGAAISPEQVHI--TSGCNQAFWAAMVT--LAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPD 152 (386)
T ss_pred HHHHHHHhCCCCCcceEEE--ecCcHHHHHHHHHH--hcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCC
Confidence 9999665566677899999 99999999988533 3679999999999999999999999999999998533456789
Q ss_pred hhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCc
Q 015435 165 FQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGE 244 (407)
Q Consensus 165 ~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~ 244 (407)
++++++.++ ++++++++ ++||||||.+++.+++++|+++|++||+++|+|++|.++.+++. ...+.........+
T Consensus 153 ~~~l~~~~~--~~~~~v~~-~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~--~~~~~~~~~~~~~~ 227 (386)
T PRK07550 153 PAAAEALIT--PRTRAIAL-VTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGG--APHDLFADPDWDDT 227 (386)
T ss_pred HHHHHHHhc--ccCcEEEE-eCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCC--CCcchhhCCCcccc
Confidence 999999887 45677776 68999999999999999999999999999999999998875421 11222111123467
Q ss_pred EEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHH
Q 015435 245 CLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADR 324 (407)
Q Consensus 245 ~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (407)
+++++||||.++++|+|+||+ +++ + .+...+.........+++.++|.++..++++. .+++++.++.
T Consensus 228 ~i~~~S~SK~~g~~G~RiG~i--~~~-~----~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~------~~~~~~~~~~ 294 (386)
T PRK07550 228 LVHLYSFSKSYALTGHRVGAV--VAS-P----ARIAEIEKFMDTVAICAPRIGQIAVAWGLPNL------ADWRAGNRAE 294 (386)
T ss_pred EEEEecchhhccCcccceEee--ecC-H----HHHHHHHHHHhhcccCCCcHHHHHHHHHhccH------HHHHHHHHHH
Confidence 999999999999999999999 565 3 34444555555555678889999999888753 2556777889
Q ss_pred HHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCC-----CH-HHHHHhHhhccEEEcCCC----------eEEecCCC
Q 015435 325 IISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL-----NS-EQVAFMTKEYHIYMTSDG----------RISMAGLS 388 (407)
Q Consensus 325 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~l~~~gi~~~~gg----------Ris~~~~~ 388 (407)
++++++.+.+.|+.... +.+ .+.+++|.|+.+ +. +++.++++++||.+.||. ||+++..+
T Consensus 295 ~~~~~~~l~~~L~~~~~---~~~-~~~g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~ 370 (386)
T PRK07550 295 IARRRDAFRAVFARLPG---WEL-LASGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANAD 370 (386)
T ss_pred HHHHHHHHHHHHHhCCC---cee-CCCceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCC
Confidence 99999999999988631 443 356889999844 33 345567788999999862 99998767
Q ss_pred CCChhHHHHHHHHH
Q 015435 389 SKTVPHLTDAIHAA 402 (407)
Q Consensus 389 ~e~i~~~~~~l~~~ 402 (407)
++++++++++|.++
T Consensus 371 ~~~~~~~~~~l~~~ 384 (386)
T PRK07550 371 VAGIGELVERLRAF 384 (386)
T ss_pred HHHHHHHHHHHHhh
Confidence 88999999999764
No 51
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=5.3e-44 Score=340.13 Aligned_cols=336 Identities=15% Similarity=0.177 Sum_probs=264.5
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCC-ceEEeecCCc
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDN-RVTTVQCLSG 109 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~-~i~~~~t~g~ 109 (407)
.++|+|+.|.+ +. +.++.+.+.+.+.+. ....+|.+..|.+++|+++++++....+...+++ +|++ |+|+
T Consensus 30 ~~~i~l~~g~~---~~-~~~~~~~~~~~~~~~---~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~--t~G~ 100 (386)
T PRK09082 30 HGAINLSQGFP---DF-DGPPYLVEALAYAMA---AGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITV--TAGA 100 (386)
T ss_pred CCEEEecCCCC---CC-CCCHHHHHHHHHHHH---cCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCCH
Confidence 57899999985 33 334444444444443 2346798899999999999999855445445554 7999 9999
Q ss_pred ccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCC
Q 015435 110 TGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHN 189 (407)
Q Consensus 110 t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~N 189 (407)
++++.+++ ...+.+||+|+++.|+|..+...++..|.+++.++++ ++++.+|++++++.+. ++++++++ ++|||
T Consensus 101 ~~al~~~~--~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~--~~~~~v~l-~~p~N 174 (386)
T PRK09082 101 TEALFAAI--LALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQ-PPDFRVDWQRFAAAIS--PRTRLIIL-NTPHN 174 (386)
T ss_pred HHHHHHHH--HHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecC-cccccCCHHHHHHhcC--ccceEEEE-eCCCC
Confidence 99999985 4447899999999999999999999999999999994 4568899999999886 55677766 89999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEee
Q 015435 190 PTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVC 269 (407)
Q Consensus 190 PtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~ 269 (407)
|||.+++.+++++|+++|++||+++|+|++|.++.+++. ...++..+....+++++++||||.||++|+|+||+ ++
T Consensus 175 PtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~--~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~i--v~ 250 (386)
T PRK09082 175 PSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGA--GHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYC--VA 250 (386)
T ss_pred CCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCC--CCCChhhCcCccCcEEEEeechhhccchhhhhhhh--hC
Confidence 999999999999999999999999999999999988542 12233333233568999999999999999999999 56
Q ss_pred cChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc
Q 015435 270 KTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHII 349 (407)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 349 (407)
+ ++ +...+.........+++.+.|.++..+++..+ ++++++++.++++++++.+.|++.+ +.+.+
T Consensus 251 ~-~~----l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~L~~~~----~~~~~ 315 (386)
T PRK09082 251 P-AA----LSAEFRKVHQYNTFTVNTPAQLALADYLRAEP------EHYLELPAFYQAKRDRFRAALANSR----FKLLP 315 (386)
T ss_pred C-HH----HHHHHHHHHhhhcCCCChHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHHHHHhCC----CcccC
Confidence 5 44 44445545444455788889998888886322 5567788899999999999999876 77788
Q ss_pred CCceeEEecCC------CH-HHHHHhHhhccEEEcCCC------------eEEecCCCCCChhHHHHHHHH
Q 015435 350 KQIGMFTFTGL------NS-EQVAFMTKEYHIYMTSDG------------RISMAGLSSKTVPHLTDAIHA 401 (407)
Q Consensus 350 ~~~~~~~~~~~------~~-~~~~~~l~~~gi~~~~gg------------Ris~~~~~~e~i~~~~~~l~~ 401 (407)
+.+|+|.|+.+ +. ++...+++++||.+.||. ||+++. +++++++++++|++
T Consensus 316 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~-~~~~l~~~~~rl~~ 385 (386)
T PRK09082 316 CEGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK-QEETLDAAAERLCQ 385 (386)
T ss_pred CCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence 89999999754 23 345567788999998861 999996 78889999998875
No 52
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-43 Score=311.50 Aligned_cols=346 Identities=14% Similarity=0.148 Sum_probs=294.1
Q ss_pred CCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCC
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLS 108 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g 108 (407)
+.++++-+++..+ +. +.|+++++++.+.+. ....+|+ .+.+++.+++++|+...++..++++-|++ ++|
T Consensus 23 g~~DvlPmWVADM---Df-~~pp~i~~Al~~rvd---hGvfGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~--~p~ 91 (388)
T COG1168 23 GNEDVLPMWVADM---DF-PTPPEIIEALRERVD---HGVFGYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVF--VPG 91 (388)
T ss_pred CCCCcceeeeecc---cC-CCCHHHHHHHHHHHh---cCCCCCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEE--cCc
Confidence 4589999999986 66 889899988888886 2345563 77889999999999888888899999999 999
Q ss_pred cccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeec-CCCCCcChhhHHHHHHcCCCCcEEEEecCC
Q 015435 109 GTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYD-PATRGLNFQGLLEDLRAAPSGAIVLLHACA 187 (407)
Q Consensus 109 ~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p 187 (407)
.-.++..+++.+ ..+||.|++..|.|+++...+...|.+++..|+.. ...+.+|++.|++++. .....++++|||
T Consensus 92 VVpgi~~~I~~~--T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~--~~~vkl~iLCnP 167 (388)
T COG1168 92 VVPGISLAIRAL--TKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFV--DERVKLFILCNP 167 (388)
T ss_pred chHhHHHHHHHh--CcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHh--cCCccEEEEeCC
Confidence 999999995444 77999999999999999999999999999999863 3335779999999998 344444555999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHH-HHcCCcEEEEEecCccccccCCCcceeE
Q 015435 188 HNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMF-VADGGECLVAQSYAKNMGLYGERVGALS 266 (407)
Q Consensus 188 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 266 (407)
|||||.+++.++|.+|.++|++||++||+||+|+++++.+. .+.+...+ ....++.+++.|.||+|+++|++++++
T Consensus 168 HNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~--~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~- 244 (388)
T COG1168 168 HNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGH--KHIPFASLSERFADNSITLTSASKTFNLAGLKCAYI- 244 (388)
T ss_pred CCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCC--CccchhhcChhhhcceEEEeeccccccchhhhheeE-
Confidence 99999999999999999999999999999999999999863 23333322 234588999999999999999999999
Q ss_pred EeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCc
Q 015435 267 IVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSAR-GTPGDW 345 (407)
Q Consensus 267 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~ 345 (407)
+.+|+++++++.+++.... ..+++.+++.+...+++.+. .+++++++.++.|++++.+.+++. +. +
T Consensus 245 -Ii~n~~lr~~~~~~l~~~~---~~~~n~lg~~A~~aAY~~G~------~WLd~L~~yl~~N~~~~~~~l~~~~P~---v 311 (388)
T COG1168 245 -IISNRELRAKFLKRLKRNG---LHGPSALGIIATEAAYNQGE------PWLDELLEYLKDNRDYVADFLNKHLPG---V 311 (388)
T ss_pred -EecCHHHHHHHHHHHHHhc---CCCCchHHHHHHHHHHHhch------HHHHHHHHHHHHHHHHHHHHHHhhCCC---c
Confidence 7999999888888777443 34889999999999999885 789999999999999999999985 32 7
Q ss_pred ccccCCceeEEecCC-----CH-HHHHHhHhhccEEEcCC------C----eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 346 SHIIKQIGMFTFTGL-----NS-EQVAFMTKEYHIYMTSD------G----RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 346 ~~~~~~~~~~~~~~~-----~~-~~~~~~l~~~gi~~~~g------g----Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
.+..|+|.|..|+++ +. +....++++.+|.+.+| | |++++. +..-+++++++|+.+++..
T Consensus 312 ~v~~p~gTYL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~ac-pr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 312 KVTEPQGTYLAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFAC-PRAILEEALERLKRALKKR 387 (388)
T ss_pred EEecCCCceeeeeeccccCCChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCC-CHHHHHHHHHHHHHHHhcc
Confidence 899999999999844 54 45667889899999987 2 999997 8999999999999998754
No 53
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2.3e-43 Score=338.66 Aligned_cols=349 Identities=15% Similarity=0.218 Sum_probs=268.7
Q ss_pred CCCCeeeeeeeeeecCCCccccchhHHHHHHHHhc----------cccccccCCCCCCcHHHHHHHHHHHhCCCC--CCC
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVN----------DQSRVKEYLPIVGLVDFNKLSAKLILGADS--PAI 96 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~--~~~ 96 (407)
+...+|+|+.++ | ......+...+..-.+ ...+...|.+..|.++||+++|+++...++ ..+
T Consensus 45 np~g~i~l~~ae----N--~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v 118 (447)
T PLN02607 45 NPSGVIQMGLAE----N--QVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARF 118 (447)
T ss_pred CCCceEEEechh----h--hhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCc
Confidence 335699999886 2 3444444444433210 011234477788999999999999965433 357
Q ss_pred CCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHh-hcCceeeEEEeecCCCCCcChhhHHHHHHcC
Q 015435 97 KDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFT-LAGLSVKTYRYYDPATRGLNFQGLLEDLRAA 175 (407)
Q Consensus 97 ~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 175 (407)
++++|++ |+|++++++++. ...+.+||.|+++.|+|+.+...+. ..|+++++|++...+++.+|++++++++.+.
T Consensus 119 ~p~~Ivi--t~G~t~al~~l~--~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a 194 (447)
T PLN02607 119 DPDRIVL--TAGATAANELLT--FILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEA 194 (447)
T ss_pred CHHHeEE--cCChHHHHHHHH--HHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHH
Confidence 8899999 999999999984 4447899999999999999998887 5899999999854445678999999988641
Q ss_pred ----CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHH------cCCcE
Q 015435 176 ----PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVA------DGGEC 245 (407)
Q Consensus 176 ----~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~------~~~~~ 245 (407)
.+.+++++ +|||||||.+++++++++|+++|++|+++||+||+|+.+.+++. +..++..+.. ..+++
T Consensus 195 ~~~~~~vk~lll-~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~--~f~S~~s~~~~~~~~~~~~~v 271 (447)
T PLN02607 195 EAANIRVRGVLI-TNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSAS--EFVSVAEIVEARGYKGVAERV 271 (447)
T ss_pred HHhCCCeeEEEE-eCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCC--CcccHHHHHhhcCCCCCcCcE
Confidence 24566666 99999999999999999999999999999999999999887642 2334433321 14689
Q ss_pred EEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHH
Q 015435 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRI 325 (407)
Q Consensus 246 i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 325 (407)
+++.||||.||++|+|+||+ ++.++++... +..... ...++.+.|.++..+|++..+.+ +++...++++
T Consensus 272 ~vi~s~SK~fg~~GlRvG~i--vs~n~~l~~~----~~~~~~--~~~~s~~~q~~~~~~L~d~~~~~---~~l~~~r~~l 340 (447)
T PLN02607 272 HIVYSLSKDLGLPGFRVGTI--YSYNDKVVTT----ARRMSS--FTLVSSQTQHLLASMLSDEEFTE---NYIRTNRERL 340 (447)
T ss_pred EEEEcchhcCCCCcceEEEE--EEcCHHHHHH----HHHHhh--cCCCCHHHHHHHHHHhCCchhHH---HHHHHHHHHH
Confidence 99999999999999999999 5756554333 332321 22567788999999999875322 4577888999
Q ss_pred HHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCCH-----------HHHHHhHhhccEEEcCCC----------eEEe
Q 015435 326 ISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNS-----------EQVAFMTKEYHIYMTSDG----------RISM 384 (407)
Q Consensus 326 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~gi~~~~gg----------Ris~ 384 (407)
+++++.+.+.|++.+ +.+..+++|+|+|+++.. +...++++++||.+.||. ||+|
T Consensus 341 ~~~~~~~~~~L~~~g----i~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~f 416 (447)
T PLN02607 341 RKRYEMIVQGLRRAG----IECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCF 416 (447)
T ss_pred HHHHHHHHHHHHhCC----CCcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEe
Confidence 999999999999887 677889999999997731 123467777899999972 9999
Q ss_pred cCCCCCChhHHHHHHHHHHHh
Q 015435 385 AGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 385 ~~~~~e~i~~~~~~l~~~l~~ 405 (407)
+.++++.++.++++|.+++++
T Consensus 417 a~~~~~~l~~gl~Ri~~~l~~ 437 (447)
T PLN02607 417 ANMSEDTLEVALKRIHRFMDR 437 (447)
T ss_pred ccCCHHHHHHHHHHHHHHHHH
Confidence 976789999999999999864
No 54
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=3.7e-43 Score=336.39 Aligned_cols=373 Identities=16% Similarity=0.158 Sum_probs=277.1
Q ss_pred ccccCCCCCchhhhhHhhh--hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHH
Q 015435 8 GKIVRAPEDPILGVTVAYN--KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSA 85 (407)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a 85 (407)
+++...+++.+..+...++ ...+.++++|+.|.|. +.+.+.++.+.+++.+.+. ....|+++.|.+++|++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~-~~~~~~~~~i~~~~~~~~~----~~~~Y~~~~G~~~lr~~ia 82 (404)
T PRK09265 8 SKLENVCYDIRGPVLKEAKRLEEEGHKILKLNIGNPA-PFGFEAPDEILRDVIRNLP----TAQGYSDSKGLFSARKAIM 82 (404)
T ss_pred HHHHhcCcchhHHHHHHHHHHHHcCCCeEEecCCCCC-cCCCCCCHHHHHHHHHHhh----cCCCCCCCCCcHHHHHHHH
Confidence 4444444443433333333 3356799999999761 1122455566666665553 2467999999999999999
Q ss_pred HHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcCh
Q 015435 86 KLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNF 165 (407)
Q Consensus 86 ~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~ 165 (407)
+++.......+++++|++ |+|+++++.+++ ...+.+||+|++++|+|..+...++..|.+++.++++.+.++.+|+
T Consensus 83 ~~~~~~~~~~~~~~~i~~--t~G~~~~l~~~~--~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~ 158 (404)
T PRK09265 83 QYYQQKGIPDVDVDDIYI--GNGVSELIVMAM--QALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDL 158 (404)
T ss_pred HHHhccCCCCCCcccEEE--eCChHHHHHHHH--HHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCH
Confidence 999543333577899999 999999999884 3347899999999999999999999999999999874334567899
Q ss_pred hhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcE
Q 015435 166 QGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245 (407)
Q Consensus 166 ~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (407)
+++++.+. ++++++++ ++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+. ...++
T Consensus 159 ~~l~~~~~--~~~~~v~l-~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~-~~~~v 232 (404)
T PRK09265 159 DDIRSKIT--PRTKAIVI-INPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGA--VHISIASLA-PDLLC 232 (404)
T ss_pred HHHHHhcc--ccceEEEE-ECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCC--CcCCHHHcC-CCceE
Confidence 99999886 55667666 79999999999999999999999999999999999999987542 122332221 23468
Q ss_pred EEEEecCccccccCCCcceeEEee-cChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHH
Q 015435 246 LVAQSYAKNMGLYGERVGALSIVC-KTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADR 324 (407)
Q Consensus 246 i~~~s~sK~~~~~G~r~G~~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (407)
++++||||.|++||+|+||+ ++ .+++..+.+.+.+... .....+++.++|.++..+|.+.+. + +...+.+++
T Consensus 233 i~~~S~SK~~~~pGlRiG~~--v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~---~-~~~~~~~~~ 305 (404)
T PRK09265 233 VTFNGLSKAYRVAGFRVGWM--VLSGPKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQS---I-NELILPGGR 305 (404)
T ss_pred EEEecchhhccCcccceEEE--EEeCchHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCchh---H-HHHHHHHHH
Confidence 99999999999999999999 55 3454444455544332 223347788899999998875421 1 122222346
Q ss_pred HHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCC---------HHHHHHhHhhccEEEcCCC----------eEEec
Q 015435 325 IISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN---------SEQVAFMTKEYHIYMTSDG----------RISMA 385 (407)
Q Consensus 325 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~~gi~~~~gg----------Ris~~ 385 (407)
++++++.+.+.|++.+. +.+..|.+|+|.|+.++ .+++.+++.++||.+.||. ||+++
T Consensus 306 ~~~~r~~~~~~L~~~~~---~~~~~p~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~ 382 (404)
T PRK09265 306 LYEQRDRAWELLNAIPG---VSCVKPKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTL 382 (404)
T ss_pred HHHHHHHHHHHHhcCCC---CcccCCCcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeC
Confidence 77788999999987632 67788999999997552 3457788888999998861 99997
Q ss_pred CCCCCChhHHHHHHHHHHHhh
Q 015435 386 GLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 386 ~~~~e~i~~~~~~l~~~l~~~ 406 (407)
.++++++.++++|+++++..
T Consensus 383 -~~~e~l~~~l~rl~~~l~~~ 402 (404)
T PRK09265 383 -PRVDDLEEAIGRIGRFLSGY 402 (404)
T ss_pred -CCHHHHHHHHHHHHHHHHHh
Confidence 48899999999999988753
No 55
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=2.4e-43 Score=337.41 Aligned_cols=368 Identities=14% Similarity=0.165 Sum_probs=282.4
Q ss_pred CCCchhhhhHhhhhc--CCCCeeeeeeeeeec-CCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhC
Q 015435 14 PEDPILGVTVAYNKD--TSPVKLNLGVGAYRT-EEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILG 90 (407)
Q Consensus 14 ~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~ 90 (407)
..++|.++...++++ ++.++++|+.|.|.. ++. +.++...+++.+.+. ......|.+..|.+++|+++++++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~-~~~~~~~~~~~~~l~--~~~~~~Y~~~~g~~~lr~~ia~~l~~ 88 (403)
T TIGR01265 12 TVNPIRAIVDNLKVKPNPEKPIIPLSHGDPSVFGNL-RTDPEAEEAVKDALR--SGKFNGYAPSVGALAAREAVAEYLSS 88 (403)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCccCCC-CCCHHHHHHHHHHHh--cCCCCCCCCCCCCHHHHHHHHHHHHh
Confidence 345677777777643 468999999998621 122 334455554444453 22345798899999999999999965
Q ss_pred CCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHH
Q 015435 91 ADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLE 170 (407)
Q Consensus 91 ~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 170 (407)
..+..+++++|++ |+|+|+++.+++..+ +.+||+|++++|+|..+...++..|.+++.+++..+.++++|++++++
T Consensus 89 ~~~~~~~~~~ii~--t~G~t~al~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 164 (403)
T TIGR01265 89 DLPGKLTADDVVL--TSGCSQAIEICIEAL--ANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEA 164 (403)
T ss_pred hcCCCCCHHHEEE--ecChHHHHHHHHHHh--CCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHH
Confidence 4455667799999 999999999995433 679999999999999999999999999999988434457899999999
Q ss_pred HHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEe
Q 015435 171 DLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQS 250 (407)
Q Consensus 171 ~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 250 (407)
.+. ++++++++ ++||||||.+++.+++++|+++|+++|+++|+|++|.++.+++. ...++..+ ....++++++|
T Consensus 165 ~~~--~~~~~v~i-~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~vi~~~S 238 (403)
T TIGR01265 165 LAD--EKTVAIVV-INPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDA--PFIPMASF-ASIVPVLSLGG 238 (403)
T ss_pred HhC--cCccEEEE-ecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCC--Cccchhhh-ccCCcEEEEee
Confidence 886 56777776 89999999999999999999999999999999999999987642 22233333 22346999999
Q ss_pred cCccccccCCCcceeEEeecCh-h-hHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHH
Q 015435 251 YAKNMGLYGERVGALSIVCKTE-D-VASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISM 328 (407)
Q Consensus 251 ~sK~~~~~G~r~G~~~~v~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 328 (407)
|||.|++||+|+||+ +++++ + +...+...+..... ...+++.+.|.++..++++.. ..++++.+++++++
T Consensus 239 ~SK~~~~pGlRiG~~--v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~-----~~~~~~~~~~~~~~ 310 (403)
T TIGR01265 239 ISKRWVVPGWRLGWI--IIHDPHGIFRDTVLQGLKNLLQ-RILGPATIVQGALPDILENTP-----QEFFDGKISVLKSN 310 (403)
T ss_pred cccccCCCcceEEEE--EEeCchhhhHHHHHHHHHHHhh-hhcCCChHHHHHHHHHHHhCh-----HHHHHHHHHHHHHH
Confidence 999999999999999 56543 2 22224444444432 234678889999998886521 25677888999999
Q ss_pred HHHHHHHHHhcCCCCCcccccCCceeEEecCCC---------H-HHHHHhHhhccEEEcCCC--------eEEecCCCCC
Q 015435 329 RQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN---------S-EQVAFMTKEYHIYMTSDG--------RISMAGLSSK 390 (407)
Q Consensus 329 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~l~~~gi~~~~gg--------Ris~~~~~~e 390 (407)
++++.+.|+..+. +.+..|.+|+|.|+.++ . +++..+++++||.+.||. ||+++. +++
T Consensus 311 ~~~l~~~L~~~~~---~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~-~~~ 386 (403)
T TIGR01265 311 AELCYEELKDIPG---LVCPKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITV-PES 386 (403)
T ss_pred HHHHHHHHhcCCC---ceecCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecC-CHH
Confidence 9999999987632 66667889999998662 2 345677788999999973 999996 778
Q ss_pred ChhHHHHHHHHHHHhh
Q 015435 391 TVPHLTDAIHAAVTRM 406 (407)
Q Consensus 391 ~i~~~~~~l~~~l~~~ 406 (407)
.+++++++|+++++++
T Consensus 387 ~l~~~l~~l~~~~~~~ 402 (403)
T TIGR01265 387 MLEEACSRIKEFCERH 402 (403)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 8999999999998764
No 56
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.5e-44 Score=339.16 Aligned_cols=365 Identities=14% Similarity=0.153 Sum_probs=277.7
Q ss_pred cccccCCCCCchhhhhHhhhhcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHH
Q 015435 7 FGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAK 86 (407)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~ 86 (407)
..|+.......+..+..... ..+++|||+.|.+ .. +.+..+.+.+.+.+. ....+|.+..|.+++|+++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~~---~~-~~~~~~~~~~~~~~~---~~~~~Y~~~~g~~~lr~~ia~ 81 (391)
T PRK08361 11 AGRINLIQRSKIRELFERAS--KMENVISLGIGEP---DF-DTPKNIKEAAKRALD---EGWTHYTPNAGIPELREAIAE 81 (391)
T ss_pred hHHHHhCCccHHHHHHHHHH--hhcCeEEcCCCCC---CC-CCCHHHHHHHHHHHh---cCCCCCCCCCCcHHHHHHHHH
Confidence 34555545444444433322 2257899999985 33 334444444444443 234569888999999999999
Q ss_pred HHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChh
Q 015435 87 LILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQ 166 (407)
Q Consensus 87 ~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~ 166 (407)
++....+..+++++|++ |+|+++++.+++ ...+.+||+|++++|+|..+...++..|.+++.++++.+.++.+|++
T Consensus 82 ~~~~~~g~~~~~~~i~~--t~G~~~al~~~~--~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 157 (391)
T PRK08361 82 YYKKFYGVDVDVDNVIV--TAGAYEATYLAF--ESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPD 157 (391)
T ss_pred HHHHHhCCCCCcccEEE--eCChHHHHHHHH--HHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHH
Confidence 99544455577899999 999999999885 34478999999999999999999999999999999854445789999
Q ss_pred hHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEE
Q 015435 167 GLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECL 246 (407)
Q Consensus 167 ~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i 246 (407)
++++.+. ++++++++ ++|+||||.+++.+++++|+++|+++++++|+||+|.++.+++. ...++..+ ..++++
T Consensus 158 ~l~~~i~--~~~~~v~i-~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~--~~~~~i 230 (391)
T PRK08361 158 ELLELIT--KRTRMIVI-NYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGA--KHYPMIKY--APDNTI 230 (391)
T ss_pred HHHHhcc--cccEEEEE-eCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCC--CCCCHhhc--CCCCEE
Confidence 9999887 45677766 89999999999999999999999999999999999999887532 11222211 236789
Q ss_pred EEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHH
Q 015435 247 VAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRII 326 (407)
Q Consensus 247 ~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (407)
+++||||.||++|+|+||+ +++ ++ +...+.........+++.+.|.++..++++... .+++++.+++++
T Consensus 231 ~~~s~SK~~~~~GlRiG~~--~~~-~~----~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~~ 299 (391)
T PRK08361 231 LANSFSKTFAMTGWRLGFV--IAP-EQ----VIKDMIKLHAYIIGNVASFVQIAGIEALRSKES----WKAVEEMRKEYN 299 (391)
T ss_pred EEecCchhcCCcHhhhhhh--ccC-HH----HHHHHHHHHhhhccCCChHHHHHHHHHhcCCcc----cHHHHHHHHHHH
Confidence 9999999999999999999 565 44 444444444333457788889999888887531 245788889999
Q ss_pred HHHHHHHHHHHhcCCCCCcccccCCceeEEecCC-----CHH-HHHHhHhhccEEEcCCC----------eEEecCCCCC
Q 015435 327 SMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL-----NSE-QVAFMTKEYHIYMTSDG----------RISMAGLSSK 390 (407)
Q Consensus 327 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~l~~~gi~~~~gg----------Ris~~~~~~e 390 (407)
++++.+.+.|++.+. +.+..|.+|+|.|+.+ +.. +...+++++||.+.||. ||+++. +++
T Consensus 300 ~~~~~~~~~L~~~~~---~~~~~p~g~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~ 375 (391)
T PRK08361 300 ERRKLVLKRLKEMPH---IKVFEPKGAFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYAT-SKE 375 (391)
T ss_pred HHHHHHHHHHHhCCC---CeecCCCEEEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecC-CHH
Confidence 999999999988732 6778889999999744 333 44566677899998862 999996 778
Q ss_pred ChhHHHHHHHHHHHhh
Q 015435 391 TVPHLTDAIHAAVTRM 406 (407)
Q Consensus 391 ~i~~~~~~l~~~l~~~ 406 (407)
+++.++++|+++++++
T Consensus 376 ~l~~al~~l~~~l~~~ 391 (391)
T PRK08361 376 KLIEAMERMEKALEEL 391 (391)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 9999999999988753
No 57
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=2.8e-43 Score=336.72 Aligned_cols=350 Identities=14% Similarity=0.119 Sum_probs=272.1
Q ss_pred cCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 28 DTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 28 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
..+.++|+|+.|.|...+. +.++.+.+++.+.+. .....|++..|.+++|+++++++...++..+++++|++ |+
T Consensus 27 ~~~~~~i~l~~g~p~~~~~-~p~~~~~~~~~~~~~---~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~i--t~ 100 (398)
T PRK08363 27 KKGIKVIRLNIGDPVKFDF-QPPEHMKEAYCRAIK---EGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRV--TA 100 (398)
T ss_pred hcCCCeEEEeCCCCCcCCC-CCCHHHHHHHHHHHH---cCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEE--eC
Confidence 3457999999998721122 334445444444443 12346888899999999999999665566778899999 99
Q ss_pred CcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCC
Q 015435 108 SGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACA 187 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p 187 (407)
|+++++.++. ...+.+||+|++++|+|..+...++..|.+++.++..+++++.+|++++++.+. ++++++++ ++|
T Consensus 101 G~~~al~~~~--~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~--~~~~~v~l-~~p 175 (398)
T PRK08363 101 AVTEALQLIF--GALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKIT--EKTKAIAV-INP 175 (398)
T ss_pred CHHHHHHHHH--HHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCC--cceEEEEE-ECC
Confidence 9999999985 344789999999999999999999999999988843245566789999999886 55677776 899
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEE
Q 015435 188 HNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSI 267 (407)
Q Consensus 188 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 267 (407)
|||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ..++..+ ....++++++||||.|+++|+|+||+
T Consensus 176 ~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~---~~~~~~~-~~~~~vi~~~SfSK~~~~~GlRiG~~-- 249 (398)
T PRK08363 176 NNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGK---HVSPGSL-TKDVPVIVMNGLSKVYFATGWRLGYI-- 249 (398)
T ss_pred CCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCc---ccCHHHc-CcCCcEEEEecchhccCCccceEEEE--
Confidence 99999999999999999999999999999999999887542 2233222 23457999999999999999999999
Q ss_pred ee-cChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 015435 268 VC-KTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWS 346 (407)
Q Consensus 268 v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 346 (407)
++ .++++.+.+...+..... ...+++.+.|.++..++.+.. +++++.+++++++++++.+.|++.+. +.
T Consensus 250 ~~~~~~~~~~~l~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~------~~l~~~~~~~~~~~~~l~~~L~~~~~---~~ 319 (398)
T PRK08363 250 YFVDPEGKLAEVREAIDKLAR-IRLCPNTPAQFAAIAGLTGPM------DYLEEYMKKLKERRDYIYKRLNEIPG---IS 319 (398)
T ss_pred EEeCcHHHHHHHHHHHHHHhc-ccccCChHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHHHHhcCCC---CE
Confidence 55 345555555555443322 124678888999988887532 56778889999999999999988732 67
Q ss_pred cccCCceeEEecCC-------CHHHHHHhHhhccEEEcCCC----------eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 347 HIIKQIGMFTFTGL-------NSEQVAFMTKEYHIYMTSDG----------RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 347 ~~~~~~~~~~~~~~-------~~~~~~~~l~~~gi~~~~gg----------Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
+..|.+|+|.|+.+ +.+++.++++++||.+.||. ||+++. ++++++.++++|++++++
T Consensus 320 ~~~p~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 320 TTKPQGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLP-PVEILEEAMDRFEEFMRE 394 (398)
T ss_pred ecCCCeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHH
Confidence 77889999999643 23456778888999998862 999985 788899999999998864
No 58
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=2.5e-43 Score=333.76 Aligned_cols=348 Identities=14% Similarity=0.114 Sum_probs=256.8
Q ss_pred CCCchhhhh---HhhhhcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhC
Q 015435 14 PEDPILGVT---VAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILG 90 (407)
Q Consensus 14 ~~~~~~~~~---~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~ 90 (407)
+++++++.. .+..+..+.++++|+.|.+ .. +.+ +.+.+++.... .....|+++.|.+++|+++++++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p---~~-~~~-~~~~~a~~~~~---~~~~~Y~~~~G~~~lr~aia~~l~~ 75 (374)
T PRK05839 4 EPYPFEKLRELLKEITPNKEYKGLDLTIGEP---QF-ETP-KFIQDALKNNA---HLLNKYPKSAGEESLREAQRGFFKR 75 (374)
T ss_pred CcchHHHHHHHHHHhhhcCCCCeEEcCCCCC---CC-CCC-HHHHHHHHHHh---hccCCCCCCCCCHHHHHHHHHHHHH
Confidence 334444443 3333434569999999986 22 334 33344433322 2356798899999999999999966
Q ss_pred CCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHH
Q 015435 91 ADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLE 170 (407)
Q Consensus 91 ~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 170 (407)
.++..+++++|++ |+|+++++..+...+....+||.|+++.|+|..|...+...|++++.++++.+.++.+|+.+.+
T Consensus 76 ~~g~~~~~~~I~i--t~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~- 152 (374)
T PRK05839 76 RFKIELKENELIP--TFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE- 152 (374)
T ss_pred HhCCCCCcceEEE--ecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh-
Confidence 5566678899999 9999999988743321114789999999999999999999999999999943334555554332
Q ss_pred HHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHH-----HcCCcE
Q 015435 171 DLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFV-----ADGGEC 245 (407)
Q Consensus 171 ~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~-----~~~~~~ 245 (407)
+ .+++++++ ++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ..++.... ...+++
T Consensus 153 -~---~~~k~v~i-~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~---~~s~~~~~~~~~~~~~~~v 224 (374)
T PRK05839 153 -L---QEVDLVIL-NSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTP---PPSLLEASILVGNESFKNV 224 (374)
T ss_pred -h---ccccEEEE-eCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCC---CCCHhhhhcccCccccCcE
Confidence 2 34677777 89999999999999999999999999999999999999865421 22221111 123689
Q ss_pred EEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHH
Q 015435 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRI 325 (407)
Q Consensus 246 i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 325 (407)
++++||||.|+++|+|+||+ +++ ++ +.+.+.........+.+.+.|.++..++.+. +++++.++++
T Consensus 225 i~~~SfSK~~~~~GlRiG~i--i~~-~~----~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~ 290 (374)
T PRK05839 225 LVINSISKRSSAPGLRSGFI--AGD-AS----ILKKYKAYRTYLGCASPLPLQKAAAVAWLDD-------EHAEFFRNIY 290 (374)
T ss_pred EEEeccccccCCccceeEEE--ecC-HH----HHHHHHHHHhhcCCCCChHHHHHHHHHhccc-------hHHHHHHHHH
Confidence 99999999999999999999 565 44 4444444443334467778888888777653 4567778888
Q ss_pred HHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCC--HHHHHHhHhhccEEEcCC----------C--eEEecCCCCCC
Q 015435 326 ISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN--SEQVAFMTKEYHIYMTSD----------G--RISMAGLSSKT 391 (407)
Q Consensus 326 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gi~~~~g----------g--Ris~~~~~~e~ 391 (407)
+++++.+.+.| + .. .|.+|+|.|+++. .+++.++++++||.+.|| + ||+++. ++++
T Consensus 291 ~~~~~~~~~~l---~----~~--~p~gg~fi~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~-~~~~ 360 (374)
T PRK05839 291 AKNLKLAREIL---G----IT--IPPATFYVWLPVDNDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY-DTPK 360 (374)
T ss_pred HHHHHHHHHhc---C----CC--CCCeeEEEEEeCCChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC-CHHH
Confidence 88888887765 4 23 6789999999873 445667767799999985 1 999986 7899
Q ss_pred hhHHHHHHHHHHH
Q 015435 392 VPHLTDAIHAAVT 404 (407)
Q Consensus 392 i~~~~~~l~~~l~ 404 (407)
++.++++|+++++
T Consensus 361 ~~~~l~~l~~~l~ 373 (374)
T PRK05839 361 LEKALEIIKTYLE 373 (374)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999875
No 59
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=2.9e-43 Score=335.54 Aligned_cols=358 Identities=14% Similarity=0.139 Sum_probs=272.6
Q ss_pred cccCCCCCchhhhhHhhhhcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHH
Q 015435 9 KIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLI 88 (407)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~ 88 (407)
++...+...+..+.+.++ ..+++||+.|.| +. +.|+...+++...+. . ...+|.+..|.+++|+++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~---~~~~i~l~~g~p---~~-~~~~~~~~~~~~~~~--~-~~~~Y~~~~g~~~lr~~ia~~~ 74 (387)
T PRK07777 5 RLRPFGTTIFAEMSALAV---RTGAVNLGQGFP---DE-DGPPEMLEAAQEAIA--G-GVNQYPPGPGIPELRAAIAAQR 74 (387)
T ss_pred hhhhcCccHHHHHHHHHh---hCCeEEccCCCC---CC-CCCHHHHHHHHHHHh--c-CCCCCCCCCCCHHHHHHHHHHH
Confidence 343444444444444432 358899999986 22 334455555555454 2 3467988899999999999988
Q ss_pred hCCCCCCCCCC-ceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecC-CCCCcChh
Q 015435 89 LGADSPAIKDN-RVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDP-ATRGLNFQ 166 (407)
Q Consensus 89 ~~~~~~~~~~~-~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~ 166 (407)
...++..++++ +|++ |+|+++++.+++ ...+.+||+|+++.|+|..+...++..|.+++.+++.+. .++.+|++
T Consensus 75 ~~~~g~~~~~~~~i~~--t~G~~~al~~~~--~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~ 150 (387)
T PRK07777 75 RRRYGLEYDPDTEVLV--TVGATEAIAAAV--LGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLD 150 (387)
T ss_pred HHHhCCCCCCCCcEEE--eCCcHHHHHHHH--HHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHH
Confidence 55445545555 7999 999999999884 445779999999999999999999999999999998533 24679999
Q ss_pred hHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEE
Q 015435 167 GLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECL 246 (407)
Q Consensus 167 ~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i 246 (407)
++++.+. ++++++++ ++||||||.+++.+++++|+++|++|++++|+||+|.++.+.+. ...++..+....++++
T Consensus 151 ~l~~~~~--~~~~~v~l-~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~--~~~~~~~~~~~~~~~i 225 (387)
T PRK07777 151 ALRAAVT--PRTRALIV-NSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGA--RHLPLATLPGMRERTV 225 (387)
T ss_pred HHHHhcC--cccEEEEE-cCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCC--CcccHhhCCCCcCcEE
Confidence 9999886 45677766 89999999999999999999999999999999999999987542 1223333322346799
Q ss_pred EEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHH
Q 015435 247 VAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRII 326 (407)
Q Consensus 247 ~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (407)
+++||||.||++|+|+||+ +++ + .+.+.+.........+++.+.|.++..++...+ +++++.++.++
T Consensus 226 ~~~S~SK~~g~~GlRiG~~--~~~-~----~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~~~ 292 (387)
T PRK07777 226 TISSAAKTFNVTGWKIGWA--CGP-A----PLIAAVRAAKQYLTYVGGAPFQPAVAHALDHED------AWVAALRDSLQ 292 (387)
T ss_pred EEeechhhccCcCceeEEE--ecC-H----HHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCc------HHHHHHHHHHH
Confidence 9999999999999999999 555 3 344445444443344567777888888776543 45677889999
Q ss_pred HHHHHHHHHHHhcCCCCCcccccCCceeEEecCC------CH-HHHHHhHhhccEEEcCCC-------------eEEecC
Q 015435 327 SMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL------NS-EQVAFMTKEYHIYMTSDG-------------RISMAG 386 (407)
Q Consensus 327 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~l~~~gi~~~~gg-------------Ris~~~ 386 (407)
++++++.+.|++.+ +.+..+.+++|.|+.+ +. +++..+++++||.+.||. ||+++.
T Consensus 293 ~~~~~l~~~L~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~ 368 (387)
T PRK07777 293 AKRDRLAAGLAEAG----FEVHDSAGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK 368 (387)
T ss_pred HHHHHHHHHHHhCC----CCccCCCcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC
Confidence 99999999999876 7778888999999753 33 345667677899998751 999986
Q ss_pred CCCCChhHHHHHHHHHH
Q 015435 387 LSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 387 ~~~e~i~~~~~~l~~~l 403 (407)
+++++++++++|+++.
T Consensus 369 -~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 369 -RDDTLDEAIRRLRALR 384 (387)
T ss_pred -CHHHHHHHHHHHHHHh
Confidence 7899999999998764
No 60
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-43 Score=338.82 Aligned_cols=350 Identities=17% Similarity=0.229 Sum_probs=290.0
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhccc-cc-cccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ-SR-VKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
.+.+++|+.|.+ +....|....++......... .. ...|.+..|.++||+.+++++....+..+++++|++ |+
T Consensus 88 ~~~~i~f~~g~p---~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~Iii--T~ 162 (459)
T COG1167 88 DPSVIDFAGGLP---DPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVI--TS 162 (459)
T ss_pred CCceecCCCCCC---CcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEE--eC
Confidence 389999999985 332456677776665554211 22 467888899999999999999657788888899999 99
Q ss_pred CcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCC
Q 015435 108 SGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACA 187 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p 187 (407)
|+++|+.++.+++ +.+||+|++.+|+|.....+++..|.+++.+|++ ..|+|++++++.+... +.++++++++.
T Consensus 163 G~q~al~l~~~~l--~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d---~~G~~~e~le~~~~~~-~~k~~y~~P~~ 236 (459)
T COG1167 163 GAQQALDLLLRLL--LDPGDTVLVEDPTYPGALQALEALGARVIPVPVD---EDGIDPEALEEALAQW-KPKAVYVTPTF 236 (459)
T ss_pred CHHHHHHHHHHHh--CCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCC---CCCCCHHHHHHHHhhc-CCcEEEECCCC
Confidence 9999999996444 7799999999999999999999999999999993 4689999999999743 57888998999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEE
Q 015435 188 HNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSI 267 (407)
Q Consensus 188 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 267 (407)
|||||.++|.+..++|+++|++||++||+||.|+++.+++.+. .++.. .+..+++|+++||||.+. ||+|+||+
T Consensus 237 qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~--~~l~~-ld~~~rViy~gSFSK~l~-PglRlG~v-- 310 (459)
T COG1167 237 QNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPP--PPLKA-LDAPGRVIYLGSFSKTLA-PGLRLGYV-- 310 (459)
T ss_pred CCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCC--CChHh-hCCCCCEEEEeeehhhcc-cccceeee--
Confidence 9999999999999999999999999999999999999985422 23333 244689999999999997 99999999
Q ss_pred eecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Q 015435 268 VCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSH 347 (407)
Q Consensus 268 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 347 (407)
+++ ..+.+.+.........+++.+.|.++...+.++ .|.++++++|+.++++++.+.+.|++... ....+
T Consensus 311 v~p-----~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G----~~~~hl~~lR~~y~~rr~~l~~~L~~~~~-~~~~~ 380 (459)
T COG1167 311 VAP-----PELIEKLLRLKQAADLGPSSLSQAALAAFLLSG----HYDRHLRRLRREYARRRDALLEALAEYLP-ELATW 380 (459)
T ss_pred eCC-----HHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcC----CHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeee
Confidence 677 556666666666677799999999999988865 46688999999999999999999998752 12678
Q ss_pred ccCCceeEEecCC----CHHHHHHhHhhccEEEcC-CC------------eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 348 IIKQIGMFTFTGL----NSEQVAFMTKEYHIYMTS-DG------------RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 348 ~~~~~~~~~~~~~----~~~~~~~~l~~~gi~~~~-gg------------Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
..|.+|+|.|+.+ +...+.+.+.++|+.+.| |. |++++..+++++++++.+|.+++++.
T Consensus 381 ~~p~gG~flwl~l~~~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~ 456 (459)
T COG1167 381 TRPEGGLFLWLELPEGIDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREA 456 (459)
T ss_pred ecCCceEEEEEEcCCCCCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence 8999999999966 444555555558999988 41 99999888899999999999998764
No 61
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=2.5e-43 Score=337.89 Aligned_cols=341 Identities=17% Similarity=0.175 Sum_probs=255.9
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhcc--ccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVND--QSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
++++++|+.|.+ +. +.++.+.+++.+.+.+. .....+|.+..|.++||+++++++...++..+++++|++ |+
T Consensus 33 ~~~~i~l~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~i--t~ 106 (409)
T PRK07590 33 EAKIIRLGIGDV---TQ-PLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFI--SD 106 (409)
T ss_pred CCceEEecCcCC---CC-CCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEE--CC
Confidence 568999999985 33 33444555555544310 124567999999999999999998766777788999999 99
Q ss_pred CcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCce-----------eeEEEeecCCCCCcChhhHHHHHHcCC
Q 015435 108 SGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLS-----------VKTYRYYDPATRGLNFQGLLEDLRAAP 176 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~-----------~~~v~~~~~~~~~~d~~~l~~~i~~~~ 176 (407)
|+++++.++ ...+.+||+|++++|+|+.+...++..|.+ ++.++++.+.++.+|+++ +
T Consensus 107 Ga~~al~~l---~~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~--------~ 175 (409)
T PRK07590 107 GAKCDTGNI---LDIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE--------E 175 (409)
T ss_pred CHHHHHHHH---HHhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc--------c
Confidence 999999886 344679999999999999999999999987 888988422233333321 3
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCcccc
Q 015435 177 SGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMG 256 (407)
Q Consensus 177 ~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 256 (407)
+++++++ ++||||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+....+++|+++||||.|+
T Consensus 176 ~~k~i~l-~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~--~~~~~~~~~~~~~~vi~~~SfSK~~~ 252 (409)
T PRK07590 176 KVDIIYL-CFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPS--LPHSIYEIEGARECAIEFRSFSKTAG 252 (409)
T ss_pred CceEEEE-eCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCC--CCcchhhCCCcccceEEEecCccccC
Confidence 5677777 79999999999999999999999999999999999999987542 12233333222357899999999999
Q ss_pred ccCCCcceeEEeecChhhHHHH--------HHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHH
Q 015435 257 LYGERVGALSIVCKTEDVASRV--------ESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISM 328 (407)
Q Consensus 257 ~~G~r~G~~~~v~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 328 (407)
++|+|+||+ +++ +++.+.+ .............+++.+.|.++..++.+.. .+++++.++.++++
T Consensus 253 ~pGlRiG~~--i~~-~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~-----~~~~~~~~~~~~~~ 324 (409)
T PRK07590 253 FTGTRCAYT--VVP-KELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEG-----KAQIKELIDYYMEN 324 (409)
T ss_pred CcCceeEEE--EcC-HHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCc-----HHHHHHHHHHHHHH
Confidence 999999999 565 3333311 0011111122223578889999888886532 15677888999999
Q ss_pred HHHHHHHHHhcCCCCCcccccCCceeEEecCC----CH-HHHHHhHhhccEEEcCCC----------eEEecCCCCCChh
Q 015435 329 RQQLFDALSARGTPGDWSHIIKQIGMFTFTGL----NS-EQVAFMTKEYHIYMTSDG----------RISMAGLSSKTVP 393 (407)
Q Consensus 329 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~l~~~gi~~~~gg----------Ris~~~~~~e~i~ 393 (407)
++.+.+.|++.+ +.+..+.+++|.|+.+ +. ++...+++++||.+.||. ||++.. ++++++
T Consensus 325 r~~l~~~L~~~~----~~~~~~~g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~ 399 (409)
T PRK07590 325 AKIIREGLESAG----FEVYGGVNAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFG-SRENVL 399 (409)
T ss_pred HHHHHHHHHhcC----CceecCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccC-CHHHHH
Confidence 999999999886 6777788999999966 33 345677778899999862 899764 789999
Q ss_pred HHHHHHHHHH
Q 015435 394 HLTDAIHAAV 403 (407)
Q Consensus 394 ~~~~~l~~~l 403 (407)
.++++|++++
T Consensus 400 ~~l~rl~~~~ 409 (409)
T PRK07590 400 EAMERIKKAL 409 (409)
T ss_pred HHHHHHHhhC
Confidence 9999998753
No 62
>PLN02368 alanine transaminase
Probab=100.00 E-value=2.8e-43 Score=333.68 Aligned_cols=346 Identities=14% Similarity=0.147 Sum_probs=256.2
Q ss_pred cccccccCCCCCchhhhhHhhh--hcCCCCeeeeeeeeeecC-----CC---------------cc-----ccchhHHHH
Q 015435 5 SVFGKIVRAPEDPILGVTVAYN--KDTSPVKLNLGVGAYRTE-----EG---------------KP-----LVLNVVRKA 57 (407)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~~~~~-----~~---------------~~-----~~~~~~~~~ 57 (407)
++.+|+.+.+...+........ .+.+.++|+|++|.|.-. +. .| .|++.+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a 89 (407)
T PLN02368 10 SLNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARA 89 (407)
T ss_pred hcCHHHHhhhhhcCCHHHHHHHHHHHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHH
Confidence 3456666666555554433222 335679999999997100 01 01 255666666
Q ss_pred HHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhh-cCCCeEEecCCCC
Q 015435 58 EQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARH-YHQLTIYIPQPTW 136 (407)
Q Consensus 58 ~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~-~~gd~Vi~~~p~y 136 (407)
...+........+|++..|.++||+++++++...++..+++++|++ |+|+++++.+++ ...+ .+||+|++++|+|
T Consensus 90 ~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~i--t~Ga~~al~~~~--~~l~~~pGd~Vli~~P~Y 165 (407)
T PLN02368 90 KHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFL--TDGASKGVMQIL--NAVIRGEKDGVLVPVPQY 165 (407)
T ss_pred HHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEE--cccHHHHHHHHH--HHHcCCCCCEEEEeCCCC
Confidence 6655312234567999999999999999999665566678899999 999999999884 3335 5899999999999
Q ss_pred CChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC----CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 015435 137 GNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA----PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGL 212 (407)
Q Consensus 137 ~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~----~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~ 212 (407)
+.|...++..|.+++.+++..++++++|++++++.+++. .+++++++ ++||||||.+++.+++++|+++|++||+
T Consensus 166 ~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l-~nP~NPTG~v~s~e~l~~l~~~a~~~~~ 244 (407)
T PLN02368 166 PLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVI-INPGNPTGQCLSEANLREILKFCYQERL 244 (407)
T ss_pred ccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEE-ECCCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 999999999999999999865556899999999998631 14566655 8999999999999999999999999999
Q ss_pred eeeeccccccccCCCCCchhHHHHHHH-H------cCCcEEEEEecCccc-cccCCCcceeEEee--cChhhHHHHHHHH
Q 015435 213 LPFFDSAYQGFASGSLDADAQSVRMFV-A------DGGECLVAQSYAKNM-GLYGERVGALSIVC--KTEDVASRVESQL 282 (407)
Q Consensus 213 ~li~D~~y~~~~~~~~~~~~~~~~~~~-~------~~~~~i~~~s~sK~~-~~~G~r~G~~~~v~--~~~~~~~~~~~~~ 282 (407)
+||+||+|.++.+++.. ...++..+. . ..+++|+++||||.| +++|+|+||+ ++ .++++ .+.+
T Consensus 245 ~II~DE~Y~~l~y~~~~-~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~--i~~~~~~~l----i~~~ 317 (407)
T PLN02368 245 VLLGDEVYQQNIYQDER-PFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYF--EMTNIPPKT----VEEI 317 (407)
T ss_pred EEEEEccccccccCCCC-CcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEE--EEeCCCHHH----HHHH
Confidence 99999999999986421 122332221 1 134899999999998 8999999999 54 34444 4444
Q ss_pred hhhhhcccCCCChhHHHHHHHHhcChh----hHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEec
Q 015435 283 KLVIRPMYSSPPIHGASIVATILKDST----MYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFT 358 (407)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 358 (407)
..... ..++++.++|.++..++.+.+ ..+.|.+..+++++.++++++++.+.|++++. +.+..|+|+||.|.
T Consensus 318 ~~~~~-~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g---~~~~~P~Gafy~~~ 393 (407)
T PLN02368 318 YKVAS-IALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKN---VVCNFTEGAMYSFP 393 (407)
T ss_pred HHHhc-ccCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---eEeCCCCeeeEecc
Confidence 44322 345788899999999997542 11224444566789999999999999999742 78889999999997
Q ss_pred CC--CHHHHH
Q 015435 359 GL--NSEQVA 366 (407)
Q Consensus 359 ~~--~~~~~~ 366 (407)
++ ..+.+.
T Consensus 394 ~i~lp~~~~~ 403 (407)
T PLN02368 394 QIKLPPKAIE 403 (407)
T ss_pred CCCCCHHHHH
Confidence 54 444443
No 63
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-43 Score=339.06 Aligned_cols=339 Identities=15% Similarity=0.134 Sum_probs=256.1
Q ss_pred CeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCC-CCC-CC--CCceEEeecC
Q 015435 32 VKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGAD-SPA-IK--DNRVTTVQCL 107 (407)
Q Consensus 32 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~-~~~-~~--~~~i~~~~t~ 107 (407)
++|+++.|.| +. +.|.. +.++...+. . .+|+++.|.+++|+++++++.... +.. .. +++|++ |+
T Consensus 101 ~~i~l~~g~p---~~-~~~~~-v~e~~~~~~--~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~v--T~ 168 (527)
T PRK09275 101 DAVSYVRDQL---GF-DADEF-VYELVDGII--G---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFA--VE 168 (527)
T ss_pred HHHhhcCCCC---CC-CCCHH-HHHHHHHHh--c---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEE--eC
Confidence 5799999986 44 44444 444656654 2 259999999999999999664432 111 12 348999 99
Q ss_pred CcccHHHHHHHHH---HhhcCCCeEEecCCCCCChHHHHhhcCcee--eEEEeecCCCCCcChhhHHHHHHcCCCCcEEE
Q 015435 108 SGTGSLRVGAEFL---ARHYHQLTIYIPQPTWGNHPKVFTLAGLSV--KTYRYYDPATRGLNFQGLLEDLRAAPSGAIVL 182 (407)
Q Consensus 108 g~t~a~~~~~~~~---~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~--~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~ 182 (407)
|+++++..++..+ ..+.+||+|++++|+|+.|...++..|..+ +.++...+.++.+|+++++++++ +++++++
T Consensus 169 Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~--~~tkai~ 246 (527)
T PRK09275 169 GGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRD--PSIKALF 246 (527)
T ss_pred CHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC--CCCCEEE
Confidence 9999999985432 247899999999999999999988776555 44544334457899999999876 6788888
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHH--cCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCC
Q 015435 183 LHACAHNPTGVDPTLEQWEQIRQLMRS--KGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGE 260 (407)
Q Consensus 183 i~~~p~NPtG~~~~~~~l~~i~~~~~~--~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 260 (407)
+ ++||||||.+++.+++++|+++|++ ++++||+||+|..|.+. ..++.. ...+++|++.||||.|+++||
T Consensus 247 l-~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~-----~~s~~~--~~~~~~I~v~SfSK~f~mtG~ 318 (527)
T PRK09275 247 L-VNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD-----FRSLFA--VLPYNTILVYSFSKYFGATGW 318 (527)
T ss_pred E-eCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc-----ccCHHH--hCCCCEEEEeehhhhccCcHh
Confidence 7 7999999999999999999999965 59999999999998752 122221 134689999999999999999
Q ss_pred CcceeEEeecChhhHHHHHHHH--------------------------------hhhhhcccCCCChhHHHH-----HHH
Q 015435 261 RVGALSIVCKTEDVASRVESQL--------------------------------KLVIRPMYSSPPIHGASI-----VAT 303 (407)
Q Consensus 261 r~G~~~~v~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~-----~~~ 303 (407)
|+||+ +++++.+.+++++.+ +.+....+.+.+++.|.+ +.+
T Consensus 319 RlG~i--~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~a 396 (527)
T PRK09275 319 RLGVI--ALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFA 396 (527)
T ss_pred HHhhh--hcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHH
Confidence 99999 576554444333322 455555666788888876 233
Q ss_pred HhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCC---------------------H
Q 015435 304 ILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN---------------------S 362 (407)
Q Consensus 304 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~ 362 (407)
+++..+ .+.++.++.++++++.+.+.|. .+ +...+|.|+||+|+++. .
T Consensus 397 ll~~~~------~~~~~~~~~~~~Rr~~l~~~Lg-~~----~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~ 465 (527)
T PRK09275 397 LLDEED------AYKKAMKDIIRRRYKALYEGLG-LP----EPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPV 465 (527)
T ss_pred HHhCch------HHHHHHHHHHHHHHHHHHHHcC-CC----CcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHH
Confidence 455433 5677888999999999988872 22 34457899999998552 2
Q ss_pred HHHHHhHhhccEEEcCCC---------eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 363 EQVAFMTKEYHIYMTSDG---------RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 363 ~~~~~~l~~~gi~~~~gg---------Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
+++.++++++||.+.||. |||++.++++++..+.++|++++++
T Consensus 466 ~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~a~~~~~~~~~~~~rl~~~l~~ 517 (527)
T PRK09275 466 DLLFRLAEETGVVLLPGGGFGGPEWSVRVSLANLNEEDYAKIGKAIRKLLDE 517 (527)
T ss_pred HHHHHHHhcCCEEEeCchhhCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 456789999999999983 9999976889999999999999865
No 64
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=4.9e-43 Score=338.17 Aligned_cols=333 Identities=17% Similarity=0.173 Sum_probs=260.4
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcc
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGT 110 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t 110 (407)
..+++|+.|.| +. +.++. +.+.+.... .....|++..|.+++|+.+++++..... .+++|++ |+|++
T Consensus 85 ~~~i~L~~g~p---~~-~~~p~-~~~~~~~~~---~~~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iii--t~G~~ 151 (431)
T PRK15481 85 TPLHDLAGGNP---DP-QRLPD-LSRYFARLS---RTPRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDL--TSGAI 151 (431)
T ss_pred chhhhhhcCCC---Ch-hHhHH-HHHHHHHhh---hhhhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEE--ecCcH
Confidence 46789998875 33 22223 333333332 1245698899999999999999832211 2469999 99999
Q ss_pred cHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCC
Q 015435 111 GSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNP 190 (407)
Q Consensus 111 ~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NP 190 (407)
+++.+++ ...+.+||.|++++|+|..+...++..|++++.+|++ + .++|++++++++. +++++++++++||||
T Consensus 152 ~al~~~~--~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~-~--~g~~~~~l~~~~~--~~~k~i~~~p~p~NP 224 (431)
T PRK15481 152 DAIERLL--CAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVD-A--EGMQPEKLERALA--QGARAVILTPRAHNP 224 (431)
T ss_pred HHHHHHH--HHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccC-C--CCCCHHHHHHHHh--cCCCEEEECCCCCCC
Confidence 9999984 4447899999999999999999999999999999983 3 3589999999887 456777776699999
Q ss_pred CCCCCCHHHHHHHHHHHHHc-CceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEee
Q 015435 191 TGVDPTLEQWEQIRQLMRSK-GLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVC 269 (407)
Q Consensus 191 tG~~~~~~~l~~i~~~~~~~-~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~ 269 (407)
||.+++.+++++|+++|++| +++||+||+|.++.+.+. .+. +....+++++++||||.|+ +|+|+||+ ++
T Consensus 225 TG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~----~~~--~~~~~~~vi~~~SfSK~~~-~GlRiG~~--i~ 295 (431)
T PRK15481 225 TGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPY----HSV--IPQTTQRWALIRSVSKALG-PDLRLAFV--AS 295 (431)
T ss_pred CCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCC----CCC--CcCCCCCEEEEeeeccccC-CCceeEEE--eC
Confidence 99999999999999999999 999999999999976421 111 1113468999999999999 99999999 45
Q ss_pred cChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc
Q 015435 270 KTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHII 349 (407)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 349 (407)
+ +++ ...+.........+++.+.|.++..++++.. |.+++++.++.++++++.+.+.|++.+ +.+..
T Consensus 296 ~-~~~----~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~----~~~~l~~~~~~~~~~r~~~~~~L~~~~----~~~~~ 362 (431)
T PRK15481 296 D-SAT----SARLRLRLNSGTQWVSHLLQDLVYACLTDPE----YQARLAQARLFYAQRRQKLARALQQYG----IAIPS 362 (431)
T ss_pred C-HHH----HHHHHHHHhccccCCCHHHHHHHHHHHhCcc----HHHHHHHHHHHHHHHHHHHHHHHHHcC----Ccccc
Confidence 5 444 4444333333334678899999999998763 446688899999999999999999886 67778
Q ss_pred CCceeEEecCCC--HHHHHHhHhhccEEEcCCC-----------eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 350 KQIGMFTFTGLN--SEQVAFMTKEYHIYMTSDG-----------RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 350 ~~~~~~~~~~~~--~~~~~~~l~~~gi~~~~gg-----------Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
|.+|+|.|+.+. .+.+...|.++||.+.||. ||+++..+++++++++++|++++.+
T Consensus 363 p~gg~f~~~~l~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~~ 431 (431)
T PRK15481 363 PGDGLNLWLPLDTDSQATALTLAKSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALNR 431 (431)
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhcC
Confidence 899999999773 3444444556899998851 9999987889999999999998753
No 65
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-42 Score=331.70 Aligned_cols=365 Identities=16% Similarity=0.199 Sum_probs=276.1
Q ss_pred ccccccCCCCCchhhhhHhhh--hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHH
Q 015435 6 VFGKIVRAPEDPILGVTVAYN--KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKL 83 (407)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ 83 (407)
+.+++.....+.+.+..+... ...+.++++|+.|.+ .. +.+..+ .+++.... ....+|.+..|.+++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~---~~-~~~~~~-~~a~~~~~---~~~~~Y~~~~g~~~lr~~ 74 (397)
T PRK07568 3 ISKRVLNMPASPIRKLVPYADEAKKRGIKVYHLNIGQP---DI-KTPEVF-FEAIKNYD---EEVLAYSHSQGIPELREA 74 (397)
T ss_pred hhhHhhhCCcchHHHHHHHHHHHHhhCCCEEEecCCCC---CC-CCCHHH-HHHHHHHh---cCCcCcCCCCCCHHHHHH
Confidence 344555555556666554332 123457999999985 22 334334 33333332 235679889999999999
Q ss_pred HHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCC-
Q 015435 84 SAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRG- 162 (407)
Q Consensus 84 ~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~- 162 (407)
+++++. ..+..+++++|++ |+|+++++.+++. ..+.+||+|++++|+|..+...++..|.+++.++++.+.++.
T Consensus 75 ia~~~~-~~~~~~~~~~i~~--t~G~~~al~~~~~--~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~ 149 (397)
T PRK07568 75 FAKYYK-KWGIDVEPDEILI--TNGGSEAILFAMM--AICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHL 149 (397)
T ss_pred HHHHHH-HhCCCCCcceEEE--cCChHHHHHHHHH--HhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCC
Confidence 999995 4566677899999 9999999999853 347799999999999999999999999999999984233333
Q ss_pred cChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcC
Q 015435 163 LNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADG 242 (407)
Q Consensus 163 ~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~ 242 (407)
.+++++++.+. ++++++++ ++|+||||.+++.+++++|+++|+++|+++|+|++|.++.+++. ...++..+....
T Consensus 150 ~~~~~l~~~~~--~~~~~v~i-~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~--~~~s~~~~~~~~ 224 (397)
T PRK07568 150 PSKEEIEKLIT--PKTKAILI-SNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGL--KYTSALSLEGLE 224 (397)
T ss_pred CCHHHHHHhcC--ccceEEEE-ECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCC--CccChhhcCCCc
Confidence 35788988886 55677666 89999999999999999999999999999999999999987642 223333332235
Q ss_pred CcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHH
Q 015435 243 GECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMA 322 (407)
Q Consensus 243 ~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 322 (407)
+++++++||||.|+++|+|+||+ +++++++.+.+.. .... ..+++.+.|.++..++++.+ .++++++
T Consensus 225 ~~~i~~~S~SK~~~~~G~R~G~~--~~~~~~~~~~~~~----~~~~-~~~~s~~~q~~~~~~l~~~~------~~~~~~~ 291 (397)
T PRK07568 225 DRVIIIDSVSKRYSACGARIGCL--ISKNKELIAAAMK----LCQA-RLSPPTLEQIGAAALLDTPE------SYFDEVR 291 (397)
T ss_pred CCEEEEecchhhccCCCcceEEE--ecCCHHHHHHHHH----Hhhc-cCCCCcHHHHHHHHHhhCCH------HHHHHHH
Confidence 78999999999999999999999 6766665554433 2222 34778889999999987643 5677888
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCC---H-HHHHHhHhh-----ccEEEcCC---------C----
Q 015435 323 DRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN---S-EQVAFMTKE-----YHIYMTSD---------G---- 380 (407)
Q Consensus 323 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~l~~-----~gi~~~~g---------g---- 380 (407)
+.++++++.+.+.|++.+. +.+..|.+|+|.|+.+. . ++...++++ +||.+.|| +
T Consensus 292 ~~~~~~~~~l~~~L~~~~~---~~~~~p~g~~~~~~~l~~~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~i 368 (397)
T PRK07568 292 EEYKKRRDILYEELNKIPG---VVCEKPKGAFYIIAKLPVDDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEI 368 (397)
T ss_pred HHHHHHHHHHHHHHhcCCC---ceecCCCcceEEEEecCCCCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeE
Confidence 9999999999999988742 66778899999998762 3 345556554 68999874 1
Q ss_pred eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 381 RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 381 Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
||+++. ++++++.++++|++++++
T Consensus 369 Rls~~~-~~~~~~~~~~~l~~~l~~ 392 (397)
T PRK07568 369 RIAYVL-NEEDLKRAMEILKEALEK 392 (397)
T ss_pred EEEEeC-CHHHHHHHHHHHHHHHHH
Confidence 999985 789999999999998875
No 66
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=1.9e-42 Score=325.36 Aligned_cols=331 Identities=13% Similarity=0.135 Sum_probs=255.0
Q ss_pred CeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCC-ceEEeecCCcc
Q 015435 32 VKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDN-RVTTVQCLSGT 110 (407)
Q Consensus 32 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~-~i~~~~t~g~t 110 (407)
.++||+.|.| +. +.++...+++.+... ....|+++.|.+++|+++++++...++..++++ +|++ |+|++
T Consensus 1 ~~~~~~~g~p---~~-~~~~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iii--t~Gs~ 70 (350)
T TIGR03537 1 RLFDFGTGDP---KE-PTPPFIRKALIDAVP----EVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLP--SAGSK 70 (350)
T ss_pred CeEeccCCCC---CC-CCCHHHHHHHHHHHh----ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--cCChH
Confidence 3688999975 32 334444444443332 356798889999999999999965556667777 9999 99999
Q ss_pred cHHHHHHHHHHhhcCC---CeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCC
Q 015435 111 GSLRVGAEFLARHYHQ---LTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACA 187 (407)
Q Consensus 111 ~a~~~~~~~~~~~~~g---d~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p 187 (407)
+++..+. ...+.+| |+|+++.|+|+.+...++..|++++.++++.+.++.+|++++++++. ++++++++ ++|
T Consensus 71 ~ai~~~~--~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~--~~~~~i~i-~~p 145 (350)
T TIGR03537 71 EAIFHFP--LVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSIL--EETKIVWI-NYP 145 (350)
T ss_pred HHHHHHH--HHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhh--hccEEEEE-eCC
Confidence 9999984 4446666 69999999999999999999999999998534456789999999887 45677776 789
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEE
Q 015435 188 HNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSI 267 (407)
Q Consensus 188 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 267 (407)
|||||.+++.+++++|+++|++||+++|+||+|.++.+++. ..+...+ ..+++++++||||.+|++|+|+||+
T Consensus 146 ~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~---~~~~~~~--~~~~~i~~~s~SK~~g~~GlRiG~~-- 218 (350)
T TIGR03537 146 HNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEP---PHSALEV--GIENVLAFHSLSKRSGMTGYRSGFV-- 218 (350)
T ss_pred CCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCC---CCchhhc--CcCCEEEEeecccccCCccccceee--
Confidence 99999999999999999999999999999999998876531 2222221 2468999999999999999999999
Q ss_pred eecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Q 015435 268 VCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSH 347 (407)
Q Consensus 268 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 347 (407)
+++ ++ +...+.........+++...|.++...+.+. .++++.+++++++++.+.+.|+..+ +.+
T Consensus 219 ~~~-~~----~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-------~~~~~~r~~l~~~~~~~~~~l~~~g----~~~ 282 (350)
T TIGR03537 219 AGD-EK----LISFLRKLRANFGVASPDFVQAAAKAAWSDD-------NHVLERRKIFKRKRDLFIEFFNKVG----LEY 282 (350)
T ss_pred ecC-HH----HHHHHHHHHHhhccCCCHHHHHHHHHHhCCc-------HHHHHHHHHHHHHHHHHHHHHHHCC----Ccc
Confidence 454 44 4444444444444466667778777777643 4466778899999999999999887 677
Q ss_pred ccCCceeEEecCC----CHHHHHHhHhhccEEEcCCC----------eEEecCCCCCChhHHHHHHHH
Q 015435 348 IIKQIGMFTFTGL----NSEQVAFMTKEYHIYMTSDG----------RISMAGLSSKTVPHLTDAIHA 401 (407)
Q Consensus 348 ~~~~~~~~~~~~~----~~~~~~~~l~~~gi~~~~gg----------Ris~~~~~~e~i~~~~~~l~~ 401 (407)
..+.+|+|.|+.+ +...+.+.|.++||.+.||. ||+++. +++++++++++|++
T Consensus 283 ~~~~g~~~~~~~~~~~~~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~~~-~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 283 LYPDATFYLWVKVPSGIDAKDYALRLLENGIVVAPGENFGSGEEGYVRVALVP-TLEECEEALRLWER 349 (350)
T ss_pred cCCCeEEEEEEECCCCCCHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHhc
Confidence 7888999998855 33444444445899998852 999874 77889999988875
No 67
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=2.9e-42 Score=331.06 Aligned_cols=339 Identities=14% Similarity=0.131 Sum_probs=252.0
Q ss_pred CeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCC-CCC-CCCC--ceEEeecC
Q 015435 32 VKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGAD-SPA-IKDN--RVTTVQCL 107 (407)
Q Consensus 32 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~-~~~-~~~~--~i~~~~t~ 107 (407)
+.|++++|.| +. + +++.+.++...+. . .+|+++.|..++++++++.+.... +.. ..++ +|++ |+
T Consensus 95 ~~i~l~~g~p---~~-~-~~~~~~~~~~~~~--~---~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~i--t~ 162 (521)
T TIGR03801 95 DIISYVIDQL---GF-D-PDAFLYEMCDGII--G---DNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFA--VE 162 (521)
T ss_pred HHHhhcCCCC---CC-C-CCHHHHHHHHHhh--c---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEE--eC
Confidence 5799999986 33 4 5577777776654 1 258777888888888885443322 221 2233 8999 99
Q ss_pred CcccHHHHHHHHHH---hhcCCCeEEecCCCCCChHHHHhhc--CceeeEEEeecCCC-----CCcChhhHHHHHHcCCC
Q 015435 108 SGTGSLRVGAEFLA---RHYHQLTIYIPQPTWGNHPKVFTLA--GLSVKTYRYYDPAT-----RGLNFQGLLEDLRAAPS 177 (407)
Q Consensus 108 g~t~a~~~~~~~~~---~~~~gd~Vi~~~p~y~~~~~~~~~~--G~~~~~v~~~~~~~-----~~~d~~~l~~~i~~~~~ 177 (407)
|+++++..++..+. .+.+||+|++++|+|+.|...++.. |.+++.++...+.. +.+|++++++++. ++
T Consensus 163 Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~--~~ 240 (521)
T TIGR03801 163 GGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD--PS 240 (521)
T ss_pred CHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcC--CC
Confidence 99999999854321 4779999999999999999998765 67777777642222 7789999998776 67
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc--CceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccc
Q 015435 178 GAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSK--GLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNM 255 (407)
Q Consensus 178 ~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~--~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 255 (407)
++++++ ++||||||.+++.+++++|+++|++| +++||+||+|..|.+. ..++.. ...+++++++||||.|
T Consensus 241 ~kai~l-~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~-----~~sl~~--~~~~~vI~v~SfSK~f 312 (521)
T TIGR03801 241 IKALFV-VNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD-----FRSLFA--ELPYNTIGVYSFSKYF 312 (521)
T ss_pred CcEEEE-eCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc-----ccchhh--hCCCCEEEEEcchhhc
Confidence 788887 79999999999999999999999987 8999999999988752 223222 2346899999999999
Q ss_pred cccCCCcceeEEeecChhhHHHHH--------------------------------HHHhhhhhcccCCCChhHHH--H-
Q 015435 256 GLYGERVGALSIVCKTEDVASRVE--------------------------------SQLKLVIRPMYSSPPIHGAS--I- 300 (407)
Q Consensus 256 ~~~G~r~G~~~~v~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~--~- 300 (407)
+++|||+||+ +++++.+.++++ ...+......+.+.+++.|. +
T Consensus 313 g~~G~RlG~i--~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al 390 (521)
T TIGR03801 313 GATGWRLGTI--ALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMAL 390 (521)
T ss_pred cCchhhhhhh--hcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHH
Confidence 9999999999 566543333332 22233444444556666565 3
Q ss_pred --HHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCC-----------------
Q 015435 301 --VATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN----------------- 361 (407)
Q Consensus 301 --~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 361 (407)
+..+++..+ .+.++.++.++++++.+.+.| |.+ +...++.++||+|+++.
T Consensus 391 ~a~~all~~~~------~y~~~~~~~~~~R~~~l~~~L---g~~--~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~ 459 (521)
T TIGR03801 391 FSLFALMDKEN------AYKAETKDICRRREKLLFRGL---GLP--LQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKK 459 (521)
T ss_pred HHHHHHhccch------hHHHHHHHHHHHHHHHHHHhc---CCC--CcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhc
Confidence 344455432 567788899999999999988 311 34457889999998653
Q ss_pred ----HHHHHHhHhhccEEEcCCC---------eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 362 ----SEQVAFMTKEYHIYMTSDG---------RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 362 ----~~~~~~~l~~~gi~~~~gg---------Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
.+++.++++++||.+.||. |||++.+++++++++.++|++++++
T Consensus 460 ~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRisla~l~~~~~~~~~~rl~~~~~~ 516 (521)
T TIGR03801 460 NYSPVDVLFRLAEETGIVLLPGGGFGGPEWSVRVSLANLNEYDYAEIGRAIRKILDE 516 (521)
T ss_pred cCCHHHHHHHHHHhCCEEEeCchhcCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Confidence 2456789999999999983 9999877889999999999999865
No 68
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=5.9e-42 Score=323.86 Aligned_cols=345 Identities=15% Similarity=0.146 Sum_probs=257.2
Q ss_pred ccccccCCCCCchhhhhHhhhhcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHH
Q 015435 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSA 85 (407)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a 85 (407)
|.+|+...+..++........ ..+...++|+.|.| .. +.++...+. +.... ...+|++..|.+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~l~~~~p---~~-~~~~~~~~~-~~~~~----~~~~Y~~~~G~~~lr~~ia 72 (364)
T PRK07865 3 VSARLPDFPWDTLAPAKATAA-AHPDGIVDLSVGTP---VD-PVPPVIQEA-LAAAA----DAPGYPTTAGTPELREAIV 72 (364)
T ss_pred ccccCCCccHHHHHHHHHHHH-hcCCCEEEcCCCCC---CC-CCCHHHHHH-HHHHH----hhCCCCCccCCHHHHHHHH
Confidence 556666666555555443332 24467999999975 33 434333333 33332 1347988899999999999
Q ss_pred HHHhCCCCCC-CCCCceEEeecCCcccHHHHHHHHHHh-hcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCc
Q 015435 86 KLILGADSPA-IKDNRVTTVQCLSGTGSLRVGAEFLAR-HYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGL 163 (407)
Q Consensus 86 ~~~~~~~~~~-~~~~~i~~~~t~g~t~a~~~~~~~~~~-~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~ 163 (407)
+++...++.. +++++|++ |+|+++++.++. ... +.+||.|++++|+|+.+...++..|++++.++.
T Consensus 73 ~~l~~~~~~~~~~~~~I~i--t~G~~~~i~~~~--~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-------- 140 (364)
T PRK07865 73 GWLARRRGVTGLDPAAVLP--VIGSKELVAWLP--TLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADS-------- 140 (364)
T ss_pred HHHHHHcCCCCCCcccEEE--ccChHHHHHHHH--HHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCC--------
Confidence 9996655554 77899999 999999999874 233 479999999999999999999999999888742
Q ss_pred ChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHH--HHc
Q 015435 164 NFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMF--VAD 241 (407)
Q Consensus 164 d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~--~~~ 241 (407)
++++.+ .+++++++ ++||||||.+++.+++++|+++|++||++||+||+|.++.+++. ....+... ...
T Consensus 141 -~~~l~~-----~~~~~v~~-~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~ 211 (364)
T PRK07865 141 -LTELGP-----QRPALIWL-NSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAE--PVSILDPRVCGGD 211 (364)
T ss_pred -hhhCCc-----ccceEEEE-cCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCC--CCccccccccCCc
Confidence 122221 34567777 79999999999999999999999999999999999999887542 11111100 112
Q ss_pred CCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHH
Q 015435 242 GGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAM 321 (407)
Q Consensus 242 ~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 321 (407)
.+++++++||||.|+++|+|+||+ +++ ++ +...+.........+++.+.|.++..++.+. ++.++.
T Consensus 212 ~~~~i~~~S~SK~~~~~GlRiG~i--~~~-~~----~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-------~~~~~~ 277 (364)
T PRK07865 212 HTGLLAVHSLSKQSNLAGYRAGFV--AGD-PA----LVAELLEVRKHAGMMVPAPVQAAMVAALGDD-------AHVREQ 277 (364)
T ss_pred cceEEEEeechhccCCCceeeEEE--ecC-HH----HHHHHHHHHHhcCCCcCHHHHHHHHHHhCCH-------HHHHHH
Confidence 368999999999999999999999 454 44 4444444444444577888999998888764 446677
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCC--CHHHHHHhHhhccEEEcCCC----------eEEecCCCC
Q 015435 322 ADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL--NSEQVAFMTKEYHIYMTSDG----------RISMAGLSS 389 (407)
Q Consensus 322 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~~~~gg----------Ris~~~~~~ 389 (407)
++.++++++.+.+.|++.| +.+..+.+|+|.|+.+ +...+.+.+.++||.+.||. ||+++. ++
T Consensus 278 ~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~ 352 (364)
T PRK07865 278 RERYARRRAVLRPALEAAG----FRVDHSEAGLYLWATRGEDCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTA-TD 352 (364)
T ss_pred HHHHHHHHHHHHHHHHHcC----CcccCCCccEEEEEeCCCCHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecC-CH
Confidence 8889999999999999876 6777788999999865 34445566677999998851 999986 78
Q ss_pred CChhHHHHHHH
Q 015435 390 KTVPHLTDAIH 400 (407)
Q Consensus 390 e~i~~~~~~l~ 400 (407)
+++++++++|+
T Consensus 353 ~~~~~~~~~l~ 363 (364)
T PRK07865 353 ERIAAAVERLA 363 (364)
T ss_pred HHHHHHHHHhh
Confidence 88999998875
No 69
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=1.1e-42 Score=329.35 Aligned_cols=345 Identities=21% Similarity=0.276 Sum_probs=270.8
Q ss_pred CeeeeeeeeeecCCCccccchhHHHHHH-HHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCC-ceEEeecCCc
Q 015435 32 VKLNLGVGAYRTEEGKPLVLNVVRKAEQ-LLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDN-RVTTVQCLSG 109 (407)
Q Consensus 32 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~-~i~~~~t~g~ 109 (407)
++|||+.|.+....+.+.++..+++... ... ......|++..|.+++|+++++++....+..++++ +|++ ++|+
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~--~~G~ 77 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAAT--SSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILV--TSGA 77 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHH--HTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEE--ESHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhc--ccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEE--eccc
Confidence 6899999987443333345556666655 222 35678899999999999999999964455556667 8999 9999
Q ss_pred ccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCC-C--CcEEEEecC
Q 015435 110 TGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAP-S--GAIVLLHAC 186 (407)
Q Consensus 110 t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~-~--~~~v~i~~~ 186 (407)
++++..+..++. ..+||+|++++|+|+.+...++..|.+++.+++..+.++.+|++++++.+.+.+ + +..++++++
T Consensus 78 ~~~~~~~~~~~~-~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~ 156 (363)
T PF00155_consen 78 QAALFLLLRLLK-INPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICN 156 (363)
T ss_dssp HHHHHHHHHHHH-SSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEES
T ss_pred ccchhhhhhccc-ccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeecc
Confidence 999988742221 458999999999999999999999999999998766778999999999998531 1 233444599
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeE
Q 015435 187 AHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALS 266 (407)
Q Consensus 187 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 266 (407)
||||||.+++.+++++|+++|++||+++|+||+|.++.+++. +..+.........++++++|+||.||++|+|+||+
T Consensus 157 p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i- 233 (363)
T PF00155_consen 157 PNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDP--DFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYI- 233 (363)
T ss_dssp SBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSS--HTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEE-
T ss_pred cccccccccccccccchhhhhcccccceeeeeceeccccCCC--ccCcccccccccccceeeeeccccccccccccccc-
Confidence 999999999999999999999999999999999999998743 33332333455566999999999999999999999
Q ss_pred EeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 015435 267 IVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWS 346 (407)
Q Consensus 267 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 346 (407)
+++ +.+.+.+......+.. +.+.+.++..++.+... ..+++++++++++++++++.+.|++.+ +.
T Consensus 234 -~~~-----~~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~---~~~~~~~~~~~l~~~~~~l~~~L~~~~----~~ 298 (363)
T PF00155_consen 234 -VAP-----PELIERLRRFQRSGLS--SSPMQAAAAAALSDPEL---VEKWLEELRERLRENRDLLREALEEIG----IT 298 (363)
T ss_dssp -EEE-----HHHHHHHHHHHHHTTS--SHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHTT----SE
T ss_pred -cch-----hhhhhhhhhccccccc--cchhhHHHHHhhhcccc---cccccccchhhHHHHHHHHHHHHHHhh----hh
Confidence 565 4455556666554433 77888888888876642 223788999999999999999999887 88
Q ss_pred cccCCceeEEecCCCH----HHHHHhHhhccEEEcCCC--------eEEecCCCCCChhHHHHHH
Q 015435 347 HIIKQIGMFTFTGLNS----EQVAFMTKEYHIYMTSDG--------RISMAGLSSKTVPHLTDAI 399 (407)
Q Consensus 347 ~~~~~~~~~~~~~~~~----~~~~~~l~~~gi~~~~gg--------Ris~~~~~~e~i~~~~~~l 399 (407)
+..+.+++|.|..++. ++..++++++||.+.||. ||+++..+++++++++++|
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 299 VLPPEAGFFLWVRLDPNDAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp EEHHSBSSEEEEEESHHHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred eeeccCccEEEEEcccchHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence 8888899999997754 456677776799999963 9999556889999999886
No 70
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=2.7e-41 Score=323.12 Aligned_cols=339 Identities=17% Similarity=0.204 Sum_probs=250.3
Q ss_pred CCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccc---cccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ---SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
+++++|+|+.|.+ .. +.++.+.+++...+. +. ....+|.|..|.+++|+++++++.... +++++|++
T Consensus 31 ~~~~~i~l~~~~~---~~-~~~~~v~~~~~~~~~-~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~---~~~d~I~i-- 100 (402)
T TIGR03542 31 PSADIIRLGIGDT---TQ-PLPASVIEAFHNAVD-ELASEETFRGYGPEQGYPFLREAIAENDYRGR---IDPEEIFI-- 100 (402)
T ss_pred CCCCeEEcCCCCC---CC-CCCHHHHHHHHHHHh-cccccccccCCCCCCCCHHHHHHHHHHHHhcC---CCHHHEEE--
Confidence 4678999999975 22 344455555555543 21 123569888999999999999874432 66799999
Q ss_pred cCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCc-----------eeeEEEeecCCCCCcChhhHHHHHHc
Q 015435 106 CLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGL-----------SVKTYRYYDPATRGLNFQGLLEDLRA 174 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~-----------~~~~v~~~~~~~~~~d~~~l~~~i~~ 174 (407)
|+|+++++.++. ..+.+||+|++++|+|..+...++..|. +++.+++..+.++..|++ +
T Consensus 101 t~Ga~~al~~l~---~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~---- 170 (402)
T TIGR03542 101 SDGAKCDVFRLQ---SLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLP---E---- 170 (402)
T ss_pred CCCcHHHHHHHH---HhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCcc---c----
Confidence 999999998763 3467899999999999999999999999 999998742333333322 1
Q ss_pred CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCcc
Q 015435 175 APSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKN 254 (407)
Q Consensus 175 ~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 254 (407)
.++++++++ ++||||||++++.+++++|+++|++||++||+||+|.+|.+++. ...++..+....+++++++||||.
T Consensus 171 ~~~~~~i~l-~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~~~~vi~~~SfSK~ 247 (402)
T TIGR03542 171 EPKIDIIYL-CSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPS--LPHSIFEIPGAKECAIEFRSFSKT 247 (402)
T ss_pred cCCceEEEE-eCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCC--CCcchhhCCCCcccEEEEecCccc
Confidence 135677777 79999999999999999999999999999999999999987531 112222222223578999999999
Q ss_pred ccccCCCcceeEEeecChhhH----HHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHH
Q 015435 255 MGLYGERVGALSIVCKTEDVA----SRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQ 330 (407)
Q Consensus 255 ~~~~G~r~G~~~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (407)
||+||+|+||+ +++ +++. +.+.............+++.+.|.++..++.+... +...+.++.++++++
T Consensus 248 ~g~pGlRiG~~--i~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~-----~~~~~~~~~~~~~~~ 319 (402)
T TIGR03542 248 AGFTGVRLGWT--VVP-KELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGL-----QPILEAISYYMENAR 319 (402)
T ss_pred cCCCCcceEEE--Eec-HHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcch-----hHHHHHHHHHHHHHH
Confidence 99999999999 565 3332 11112222222222335778889988888876431 335566788899999
Q ss_pred HHHHHHHhcCCCCCcccccCCceeEEecCC----CH-HHHHHhHhhccEEEcCCC----------eEEecCCCCCChhHH
Q 015435 331 QLFDALSARGTPGDWSHIIKQIGMFTFTGL----NS-EQVAFMTKEYHIYMTSDG----------RISMAGLSSKTVPHL 395 (407)
Q Consensus 331 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~l~~~gi~~~~gg----------Ris~~~~~~e~i~~~ 395 (407)
.+.+.|++.+ +.+..+.+++|.|+.+ +. ++...+++++||.+.||. ||+++. ++++++.+
T Consensus 320 ~~~~~L~~~~----~~~~~~~~~~f~~v~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~ 394 (402)
T TIGR03542 320 ILRKALEAAG----FKVYGGEHAPYLWVKTPEGISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFG-KRENIVEA 394 (402)
T ss_pred HHHHHHHhcC----ceecCCCceeEEEEECCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHH
Confidence 9999998876 6667778899999966 33 456677777899999862 999876 88999999
Q ss_pred HHHHHHHH
Q 015435 396 TDAIHAAV 403 (407)
Q Consensus 396 ~~~l~~~l 403 (407)
+++|+++|
T Consensus 395 l~~l~~~~ 402 (402)
T TIGR03542 395 CERIKEAL 402 (402)
T ss_pred HHHHHhhC
Confidence 99998753
No 71
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1.4e-41 Score=320.21 Aligned_cols=336 Identities=15% Similarity=0.117 Sum_probs=250.9
Q ss_pred CCchhhhhHhhh--hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCC
Q 015435 15 EDPILGVTVAYN--KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGAD 92 (407)
Q Consensus 15 ~~~~~~~~~~~~--~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~ 92 (407)
..++++..+... ..++.+++||+.|.| .. +.++...++ +.... ....|+++.|.+++|+++++++....
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~i~l~~~~p---~~-~~~~~~~~~-~~~~~----~~~~Y~~~~G~~~lr~~ia~~~~~~~ 73 (357)
T TIGR03539 3 DFPWDSLAPYKAKAASHPDGIVDLSVGTP---VD-PVPPLIRAA-LAAAA----DAPGYPQTWGTPELREAIVDWLERRR 73 (357)
T ss_pred cchHHHHHHHHHHhhhCCCCeEEccCCCC---CC-CCCHHHHHH-HHHHH----hhCCCCcccCCHHHHHHHHHHHHHhc
Confidence 344555544333 234568899999975 33 434444444 33332 24569889999999999999996655
Q ss_pred CCC-CCCCceEEeecCCcccHHHHHHHHHHh-hcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHH
Q 015435 93 SPA-IKDNRVTTVQCLSGTGSLRVGAEFLAR-HYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLE 170 (407)
Q Consensus 93 ~~~-~~~~~i~~~~t~g~t~a~~~~~~~~~~-~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 170 (407)
+.. +++++|++ |+|+++++..+. ... +.+||.|++++|+|+.+...++..|.+++.++ +++.+..
T Consensus 74 ~~~~~~~~~I~i--t~G~~~~i~~~~--~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~~ 140 (357)
T TIGR03539 74 GVPGLDPTAVLP--VIGTKELVAWLP--TLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD---------DPTELDP 140 (357)
T ss_pred CCCCCCcCeEEE--ccChHHHHHHHH--HHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcCc
Confidence 654 78899999 999999999874 222 57999999999999999999999999987773 1222221
Q ss_pred HHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHH--HHHcCCcEEEE
Q 015435 171 DLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRM--FVADGGECLVA 248 (407)
Q Consensus 171 ~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~--~~~~~~~~i~~ 248 (407)
++++++++ ++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++.. ...+.. .....++++++
T Consensus 141 -----~~~~~v~~-~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~--~~~~~~~~~~~~~~~vi~~ 212 (357)
T TIGR03539 141 -----VGPDLIWL-NSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRP--VSILDPRVCGGDHTGLLAV 212 (357)
T ss_pred -----cCccEEEE-eCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCC--ccceecccCCCccccEEEE
Confidence 35667666 799999999999999999999999999999999999988875421 111110 01123579999
Q ss_pred EecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHH
Q 015435 249 QSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISM 328 (407)
Q Consensus 249 ~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 328 (407)
+||||.|+++|+|+||+ +++ ++ +...+.........+++.++|.++..++++. .+.+..++.++++
T Consensus 213 ~S~SK~~~~~G~R~G~~--i~~-~~----~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~ 278 (357)
T TIGR03539 213 HSLSKRSNLAGYRAGFV--AGD-PA----LVAELLTVRKHAGLMVPAPVQAAMVAALGDD-------GHVAEQKARYAAR 278 (357)
T ss_pred eccccccCCCceeEEEE--ecC-HH----HHHHHHHHHhhcccCCCHHHHHHHHHHcCCH-------HHHHHHHHHHHHH
Confidence 99999999999999999 555 44 4444444444444578888999999888763 4456778889999
Q ss_pred HHHHHHHHHhcCCCCCcccccCCceeEEecCC--CHHHHHHhHhhccEEEcCCC----------eEEecCCCCCChhHHH
Q 015435 329 RQQLFDALSARGTPGDWSHIIKQIGMFTFTGL--NSEQVAFMTKEYHIYMTSDG----------RISMAGLSSKTVPHLT 396 (407)
Q Consensus 329 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~~~~gg----------Ris~~~~~~e~i~~~~ 396 (407)
++++.+.|++.| +.+..|.+|+|.|+.+ +...+.+.|.++||.+.||. ||+++. +++++++++
T Consensus 279 ~~~~~~~L~~~g----~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~~i~~~~ 353 (357)
T TIGR03539 279 RAQLKPALEKAG----FRIDHSEAGLYLWATRGEDAWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTA-TDERIAAAV 353 (357)
T ss_pred HHHHHHHHHHcC----CCCcCCCccEEEEEECCCCHHHHHHHHHhCCEEECCccccCCCCCCeEEEEecC-CHHHHHHHH
Confidence 999999998876 6777888999999965 44445566677999998862 999997 778888888
Q ss_pred HHH
Q 015435 397 DAI 399 (407)
Q Consensus 397 ~~l 399 (407)
++|
T Consensus 354 ~~l 356 (357)
T TIGR03539 354 ARL 356 (357)
T ss_pred Hhh
Confidence 776
No 72
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.1e-41 Score=318.76 Aligned_cols=324 Identities=14% Similarity=0.098 Sum_probs=251.7
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCc
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSG 109 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~ 109 (407)
..++|+|+.|.+ ..+.++.+++++.+.+. . ...| |..|.+++|+++++++ + +++++|++ |+|+
T Consensus 28 ~~~~i~l~~nen----~~~~~~~v~~a~~~~~~--~--~~~Y-p~~g~~~Lr~aia~~~-~-----~~~~~I~v--t~Gs 90 (366)
T PRK01533 28 DHSFVKLASNEN----PFGCSPRVLDELQKSWL--D--HALY-PDGGATTLRQTIANKL-H-----VKMEQVLC--GSGL 90 (366)
T ss_pred CCceEEeCCCCC----CCCCCHHHHHHHHHHHH--h--cCcC-CCCCHHHHHHHHHHHh-C-----CCcceEEE--CCCH
Confidence 468999999984 22455566666655554 1 2235 7789999999999998 4 45689999 9999
Q ss_pred ccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCC
Q 015435 110 TGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHN 189 (407)
Q Consensus 110 t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~N 189 (407)
++++.+++ ...+.+||+|++++|+|..|...+...|.+++.++++ ++++|++++++.+. ++++++++ ++|||
T Consensus 91 ~e~i~~~~--~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~---~~~~d~~~l~~~~~--~~~~~v~i-~~P~N 162 (366)
T PRK01533 91 DEVIQIIS--RAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN---NGVYDLDEISSVVD--NDTKIVWI-CNPNN 162 (366)
T ss_pred HHHHHHHH--HHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC---CCCcCHHHHHHHhC--cCCcEEEE-eCCCC
Confidence 99999985 3347899999999999999999999999999999983 34799999999886 55677776 89999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEee
Q 015435 190 PTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVC 269 (407)
Q Consensus 190 PtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~ 269 (407)
|||.+++.+++++|+++|++++ ++|+||+|.+|.+.+. ..+........+++|+++||||.||++|+|+||+ ++
T Consensus 163 PTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~---~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~--i~ 236 (366)
T PRK01533 163 PTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKD---FPETLPLLEKHKNILVLRTFSKAYGLASFRVGYA--VG 236 (366)
T ss_pred CCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhcccc---CcchhHHhccCCCEEEEeCchHHhcChHHHHhHH--hC
Confidence 9999999999999999999877 5677999998876431 1111122334578999999999999999999999 56
Q ss_pred cChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc
Q 015435 270 KTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHII 349 (407)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 349 (407)
+ ++ +.+.+..... .++.+.++|.++..+|++. .+.++.++..+++++++.+.++..| +.+..
T Consensus 237 ~-~~----~~~~l~~~~~--~~~~~~~~q~aa~~~l~~~-------~~~~~~~~~~~~~r~~~~~~l~~~g----~~~~~ 298 (366)
T PRK01533 237 H-EE----LIEKLNVVRL--PFNVSSLAQKAATIAFGDD-------EFIEEIVRVNTEGLRQYESFCKENE----IPFYQ 298 (366)
T ss_pred C-HH----HHHHHHHhcC--CCCcCHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHHHhCC----CccCC
Confidence 5 44 4444444432 3578999999999999865 4455666777778888888888777 66667
Q ss_pred CCceeEEecCC-CHHHHHHhHhhccEEEcCCC---eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 350 KQIGMFTFTGL-NSEQVAFMTKEYHIYMTSDG---RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 350 ~~~~~~~~~~~-~~~~~~~~l~~~gi~~~~gg---Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
+.+ .|.|+.+ +.+.+...|.++||.+.+.. ||+++ +.+++++++++|+++++.
T Consensus 299 ~~~-nf~~~~~~~~~~~~~~l~~~GI~Vr~~~~~iRis~~--~~~~~~~l~~al~~~~~~ 355 (366)
T PRK01533 299 SQT-NFIFLPVENGGEIYEACAHAGFIIRPFPNGVRITVG--TREQNEGVISVLQQHFEN 355 (366)
T ss_pred CcC-cEEEEeCCCHHHHHHHHHHCCcEEccCCCceEEeCC--CHHHHHHHHHHHHHHHHh
Confidence 754 5777766 44555566667999998854 99988 578999999999998764
No 73
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-40 Score=314.82 Aligned_cols=333 Identities=18% Similarity=0.219 Sum_probs=248.6
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCC--CCCCCCCceEEeecCC
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGAD--SPAIKDNRVTTVQCLS 108 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~--~~~~~~~~i~~~~t~g 108 (407)
..+++|+.|.+ ..+.|+.+.+++.+.+. .......| |..|.++||+++++++...+ +..+++++|++ |+|
T Consensus 28 ~~~~~l~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~Y-~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~i--t~G 99 (374)
T PRK02610 28 IQLDRLDTNEF----PYDLPPDLKQKLAWLYQ-QGIESNRY-PDGGHEALKQAIAEYVNESAAGSSQITPANISV--GNG 99 (374)
T ss_pred cceeEecCCCC----CCCCCHHHHHHHHHHHh-hcccccCC-CCCchHHHHHHHHHHhCccccccCCCCHHHEEE--cCC
Confidence 35899999985 22556666666666554 11123458 55799999999999994433 35577899999 999
Q ss_pred cccHHHHHHHHHHhhcCCC-eEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC--CCCcEEEEec
Q 015435 109 GTGSLRVGAEFLARHYHQL-TIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA--PSGAIVLLHA 185 (407)
Q Consensus 109 ~t~a~~~~~~~~~~~~~gd-~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~--~~~~~v~i~~ 185 (407)
+++++..++ ...+.+|| .|++++|+|..|...++..|++++.+++ +++++++|++++++.+.+. ++.+++++ +
T Consensus 100 a~~al~~~~--~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~~~~~~~~~~k~i~l-~ 175 (374)
T PRK02610 100 SDELIRSLL--IATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGR-DPETFEIDLAAAQSAIEQTQNPPVRVVFV-V 175 (374)
T ss_pred hHHHHHHHH--HHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecC-CcccCCCCHHHHHHHHHhhcCCCceEEEE-e
Confidence 999998763 44456776 8999999999999999999999999998 3445899999999988631 35667777 7
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCccee
Q 015435 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGAL 265 (407)
Q Consensus 186 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 265 (407)
+||||||.+++.+++++|+++| ++++||+||+|.+|.+.. .+..+ ...+++|+++||||.||++|+|+||+
T Consensus 176 ~P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~------~~~~~-~~~~~~ivi~SfSK~~g~~GlRiG~~ 246 (374)
T PRK02610 176 HPNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQTT------LVGEL-AQHPNWVILRTFSKAFRLAAHRVGYA 246 (374)
T ss_pred CCCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccCccc------hHHHH-hcCCCEEEEEecchhccCcccceeee
Confidence 8999999999999999999887 499999999999886421 12222 23467889999999999999999999
Q ss_pred EEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 015435 266 SIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDW 345 (407)
Q Consensus 266 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 345 (407)
+++ ++ +.+.+..... .++.+.+.|.++..++++.+ .+.+.+++.++ .++.+.+.|+.++. +
T Consensus 247 --v~~-~~----l~~~l~~~~~--~~~~~~~~q~a~~~~l~~~~------~~~~~~~~~~~-~r~~l~~~L~~~~~---~ 307 (374)
T PRK02610 247 --IGH-PE----LIAVLEKVRL--PYNLPSFSQLAAQLALEHRQ------ELLAAIPEILQ-ERDRLYQALQELPQ---L 307 (374)
T ss_pred --ecC-HH----HHHHHHHhcC--CCCCCHHHHHHHHHHhcCHH------HHHHHHHHHHH-HHHHHHHHHHhCCC---c
Confidence 565 44 4444444432 24678889999988887643 33444444444 46778888877632 4
Q ss_pred ccccCCceeEEecCC----CHHHHHHhHhhccEEEcCCC---eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 346 SHIIKQIGMFTFTGL----NSEQVAFMTKEYHIYMTSDG---RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 346 ~~~~~~~~~~~~~~~----~~~~~~~~l~~~gi~~~~gg---Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
.+ .|.+|+|.|+.+ +.+.+...+.++||.+.++. ||+++. ++++++++++|+++++.+
T Consensus 308 ~~-~p~~g~f~~~~l~~~~~~~~~~~~l~~~gi~v~~~~~~lRls~~~--~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 308 RV-WPSAANFLYLRLSQDAALAALHQALKAQGTLVRHTGGGLRITIGT--PEENQRTLERLQAALTQL 372 (374)
T ss_pred Ee-CCCcceEEEEeCCCCCCHHHHHHHHHHCCEEEEeCCCeEEEeCCC--HHHHHHHHHHHHHHHhhc
Confidence 44 467889999865 34555555677999998753 999884 467899999999998765
No 74
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-40 Score=315.36 Aligned_cols=341 Identities=16% Similarity=0.216 Sum_probs=261.9
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCc
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSG 109 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~ 109 (407)
..+++||+.|.| .. +.+..+.+++...+........+|.+..|++++|+.+++++...++..+++++|++ |+|+
T Consensus 32 ~~~~~~l~~g~p---~~-~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~--t~G~ 105 (394)
T PRK06836 32 ADNVFDFSLGNP---SV-PPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVM--TCGA 105 (394)
T ss_pred CCCeEEecCcCC---CC-CCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEE--eCCh
Confidence 367899999864 32 33434444443333311123577988899999999999999655555677899999 9999
Q ss_pred ccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCC
Q 015435 110 TGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHN 189 (407)
Q Consensus 110 t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~N 189 (407)
++++..++ ...+.+||.|++++|+|..+...++..|++++.++++ ++++++|++++++.+. ++++++++ ++|+|
T Consensus 106 ~~al~~~~--~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~-~~~~~~d~~~l~~~~~--~~~~~v~~-~~p~N 179 (394)
T PRK06836 106 AGALNVAL--KAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTD-TDTFQPDLDALEAAIT--PKTKAVII-NSPNN 179 (394)
T ss_pred HHHHHHHH--HHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecC-CccCcCCHHHHHhhcC--cCceEEEE-eCCCC
Confidence 99999884 3447899999999999999999999999999999984 4457899999999987 56777776 78999
Q ss_pred CCCCCCCHHHHHHHHHHHHH------cCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcc
Q 015435 190 PTGVDPTLEQWEQIRQLMRS------KGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVG 263 (407)
Q Consensus 190 PtG~~~~~~~l~~i~~~~~~------~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 263 (407)
|||.+++.+++++|+++|++ ||+++|+||+|.++.+++. ....+ ....+++++++||||.|++||+|+|
T Consensus 180 PtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~---~~~~~~~i~~~S~SK~~~~pGlRiG 254 (394)
T PRK06836 180 PTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGA--EVPYI---FKYYDNSIVVYSFSKSLSLPGERIG 254 (394)
T ss_pred CCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCC--CCCCh---HHccCcEEEEecchhhccCcceeeE
Confidence 99999999999999999999 8999999999999987542 11121 2235689999999999999999999
Q ss_pred eeEEeecChhhHH--HHHHHHhhhhhc-ccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015435 264 ALSIVCKTEDVAS--RVESQLKLVIRP-MYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARG 340 (407)
Q Consensus 264 ~~~~v~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 340 (407)
|+ +++ ++..+ .+...+....+. ...+++.+.|.++..++.+.. .++.++++++.+.+.|++.|
T Consensus 255 ~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~-----------~~~~~~~~r~~l~~~L~~~g 320 (394)
T PRK06836 255 YI--AVN-PEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDATV-----------DVSIYKRNRDLLYDGLTELG 320 (394)
T ss_pred EE--ecC-HHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCChH-----------HHHHHHHHHHHHHHHHHhCC
Confidence 99 454 33221 123323222222 123677888999888887531 24567788899999998876
Q ss_pred CCCCcccccCCceeEEecCC---CHHHHHHhHhhccEEEcCCC--------eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 341 TPGDWSHIIKQIGMFTFTGL---NSEQVAFMTKEYHIYMTSDG--------RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gi~~~~gg--------Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
+.+..+.+|+|.|+.+ +...+.+.|.++||.+.||. ||+++. ++++++.++++|++++++.
T Consensus 321 ----~~~~~~~gg~~~~~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~~-~~~~~~~~i~~l~~~l~~~ 392 (394)
T PRK06836 321 ----FECVKPQGAFYLFPKSPEEDDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYCV-DTETIERSLPAFEKLAKEY 392 (394)
T ss_pred ----CEeecCCceEEEEEeCCCCCHHHHHHHHHhCCEEEECchhcCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 7778888999999855 44444466677899999972 999984 8999999999999998763
No 75
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=8e-40 Score=307.51 Aligned_cols=336 Identities=15% Similarity=0.153 Sum_probs=251.4
Q ss_pred hhhhhHhhhhcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCC
Q 015435 18 ILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIK 97 (407)
Q Consensus 18 ~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~ 97 (407)
+.++.+..+. ..++++||+.|.+ +. +.|+.+.+++.+.+. ...+|+ ..+.+++|+++++++ + ++
T Consensus 7 ~~~~~~~~~~-~~~~~~~l~~~~~--~~--~~p~~~~~a~~~~~~----~~~~Y~-~~~~~~lr~~ia~~~-~-----~~ 70 (354)
T PRK06358 7 INEIAREKGL-TKNMILDFSANIN--PL--GVPESLKQAITENLD----KLVEYP-DPDYLELRKRIASFE-Q-----LD 70 (354)
T ss_pred HHHHHHHhCC-CccceEEecCCCC--CC--CCCHHHHHHHHHHHH----hhhcCC-CccHHHHHHHHHHHh-C-----CC
Confidence 4444444432 2356899999874 22 335555555554442 245684 457899999999998 3 45
Q ss_pred CCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCC
Q 015435 98 DNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPS 177 (407)
Q Consensus 98 ~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 177 (407)
+++|++ |+|+++++.++.. .+. +++|++++|+|+.|...++..|.+++.+++..+.++.+| +++.+.+. .+
T Consensus 71 ~~~i~i--t~Ga~~~l~~~~~---~~~-~~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~--~~ 141 (354)
T PRK06358 71 LENVIL--GNGATELIFNIVK---VTK-PKKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIK--EE 141 (354)
T ss_pred hhhEEE--CCCHHHHHHHHHH---HhC-CCcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhc--cC
Confidence 799999 9999999998843 243 468999999999999999999999999998534456788 66666665 45
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccc
Q 015435 178 GAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGL 257 (407)
Q Consensus 178 ~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 257 (407)
++++++ ++||||||.+++.+++++|+++|++||+++|+||+|.+|.+++. ..+........+++++++||||.||+
T Consensus 142 ~~~v~~-~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~---~~~~~~~~~~~~~vi~~~S~SK~~gl 217 (354)
T PRK06358 142 IDLVFL-CNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENE---TISMINYLENFKNLIIIRAFTKFFAI 217 (354)
T ss_pred CCEEEE-eCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCcc---chhHHHhccCCCCEEEEEechhhccC
Confidence 677766 89999999999999999999999999999999999999987642 22222223445789999999999999
Q ss_pred cCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015435 258 YGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALS 337 (407)
Q Consensus 258 ~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 337 (407)
+|+|+||+ +++++++.+.+. .... .++.+.+.|.++..++++. +++++.++.++++++.+.+.|+
T Consensus 218 ~G~RiG~l--v~~~~~~~~~~~----~~~~--~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~r~~l~~~L~ 282 (354)
T PRK06358 218 PGLRLGYG--LTSNKNLAEKLL----QMRE--PWSINTFADLAGQTLLDDK-------EYIKKTIQWIKEEKDFLYNGLS 282 (354)
T ss_pred cchhheee--ecCCHHHHHHHH----HhCC--CCcchHHHHHHHHHHhccH-------HHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999 576655444433 3332 3467888899999998754 4467778888999999999998
Q ss_pred hcCCCCCcccccCCceeEEecCCC-HHHHHHhHhhccEEEcCCC----------eEEecCCCCCChhHHHHHHHHHH
Q 015435 338 ARGTPGDWSHIIKQIGMFTFTGLN-SEQVAFMTKEYHIYMTSDG----------RISMAGLSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~gi~~~~gg----------Ris~~~~~~e~i~~~~~~l~~~l 403 (407)
+.+. +.+..+.++ |.|+.+. .+.+.+.|.++||.+.++. ||+++ ++++.++++++|++++
T Consensus 283 ~~~~---~~~~~~~g~-f~~~~~~~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls~~--~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 283 EFKG---IKVYKPSVN-FIFFKLEKPIDLRKELLKKGILIRSCSNYRGLDENYYRVAVK--SREDNKKLLKALEVIL 353 (354)
T ss_pred cCCC---cEEcCCcce-EEEEEcCchHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC--CHHHHHHHHHHHHHHh
Confidence 8632 566677665 7788763 3334444445899998852 88888 5788999999998765
No 76
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.1e-40 Score=311.13 Aligned_cols=332 Identities=16% Similarity=0.157 Sum_probs=253.5
Q ss_pred CeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCccc
Q 015435 32 VKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTG 111 (407)
Q Consensus 32 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~ 111 (407)
..|+|+.|.+ .. +.|+.+++++.+.+.........| |..|.+++|+++++++...++..+++++|++ |+|+++
T Consensus 27 ~~i~l~~~~~---~~-~~~~~~~~al~~~l~~~~~~~~~Y-~~~g~~~lr~aia~~~~~~~~~~~~~~~I~i--t~G~~~ 99 (368)
T PRK03317 27 VPVRLNTNEN---PY-PPSPALVADIAEAVAEAAAGLNRY-PDRDAVALRADLAAYLTAQTGVGLTVENVWA--ANGSNE 99 (368)
T ss_pred ceeEecCCCC---CC-CCCHHHHHHHHHHHhhhhhhhccC-CCCchHHHHHHHHHHhhhhccCCCChhhEEE--CCCHHH
Confidence 6799999985 22 455566666666554112235667 5578999999999999666566778899999 999999
Q ss_pred HHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCC
Q 015435 112 SLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPT 191 (407)
Q Consensus 112 a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPt 191 (407)
++.+++ ...+.+||.|+++.|+|..|...++..|.+++.++. .+++++|++++++++.+. +.+++++ ++|||||
T Consensus 100 ~l~~~~--~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~~~~~-~~~~i~l-~~p~NPt 173 (368)
T PRK03317 100 ILQQLL--QAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPR--AADFTLDVDAAVAAIAEH-RPDVVFL-TSPNNPT 173 (368)
T ss_pred HHHHHH--HHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEccc--CCCCCCCHHHHHHHHhcc-CCCEEEE-eCCCCCC
Confidence 999995 334789999999999999999999999999988876 345789999999988732 4566666 8999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecC
Q 015435 192 GVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKT 271 (407)
Q Consensus 192 G~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~ 271 (407)
|.+++.+++++|+++| +++||+||+|.+|.+.+. . +...+....+++++++||||.||++|+|+||+ +++
T Consensus 174 G~~~~~~~l~~l~~~~---~~~lI~DE~y~~~~~~~~---~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~--~~~- 243 (368)
T PRK03317 174 GTALPLDDVEAILDAA---PGIVVVDEAYAEFRRSGT---P-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYL--AAA- 243 (368)
T ss_pred CCCCCHHHHHHHHHHC---CceEEEeCCchhhcccCC---c-CHHHHHHhCCCEEEEEechhhhccchhhhhhh--hCC-
Confidence 9999999999997766 789999999999876532 1 11122233458999999999999999999999 454
Q ss_pred hhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCC
Q 015435 272 EDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQ 351 (407)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 351 (407)
++ +.+.+..... .++.+.++|.++..++++.+ ...+.+++++++++.+.+.|+..| +.+..+.
T Consensus 244 ~~----~~~~l~~~~~--~~~~s~~~~~a~~~~l~~~~-------~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~ 306 (368)
T PRK03317 244 PA----VVDALRLVRL--PYHLSAVTQAAARAALRHAD-------ELLASVAALRAERDRVVAWLRELG----LRVAPSD 306 (368)
T ss_pred HH----HHHHHHhcCC--CCCCCHHHHHHHHHHhhCHH-------HHHHHHHHHHHHHHHHHHHHHHCC----CEeCCCC
Confidence 44 4444443332 34778889999888887642 233444567888889999998877 6777888
Q ss_pred ceeEEecCC-CHHHHHHhHhhccEEEcCCC-----eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 352 IGMFTFTGL-NSEQVAFMTKEYHIYMTSDG-----RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 352 ~~~~~~~~~-~~~~~~~~l~~~gi~~~~gg-----Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
++++.|..+ +.+.+.+.+.++||.+.+.+ ||+++ +.+++++++++|+++++.
T Consensus 307 ~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~--~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 307 ANFVLFGRFADRHAVWQGLLDRGVLIRDVGIPGWLRVTIG--TPEENDAFLAALAEVLAT 364 (368)
T ss_pred CcEEEEeccCCHHHHHHHHHHCCEEEEeCCCCCeEEEecC--CHHHHHHHHHHHHHHHHH
Confidence 998888655 44555555666899998864 89987 567899999999998763
No 77
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9.3e-40 Score=308.06 Aligned_cols=319 Identities=19% Similarity=0.226 Sum_probs=243.5
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCc
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSG 109 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~ 109 (407)
+.++|+|+.|.+ .. +.++.+.+++.+.+. ....|+ ..|.++||+++++++ + +++++|++ |+|+
T Consensus 29 ~~~~i~l~~~~~---~~-~~~~~~~~~~~~~~~----~~~~Y~-~~~~~~lr~~ia~~~-~-----~~~~~I~i--t~G~ 91 (357)
T PRK14809 29 PDDLVKLSSNEN---PH-GPSPAAVEAIREAAE----RVHSYP-KASHADLTAALADRW-D-----VSPEQVWL--ANGG 91 (357)
T ss_pred ccceeEecCCCC---CC-CCCHHHHHHHHHHHh----hhhcCC-CCCHHHHHHHHHHHh-C-----CCcceEEE--CCCH
Confidence 468999999974 22 334455555544443 245684 578999999999998 3 45689999 9999
Q ss_pred ccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCC
Q 015435 110 TGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHN 189 (407)
Q Consensus 110 t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~N 189 (407)
++++.++. ...+.+||.|++++|+|..+.......|.+++.+++..++++.++++++.+... +++++++ ++|||
T Consensus 92 ~~al~~~~--~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~---~~k~i~l-~~p~N 165 (357)
T PRK14809 92 DGALDYLA--RAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYD---GERIVYL-TSPHN 165 (357)
T ss_pred HHHHHHHH--HHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc---CCcEEEE-eCCCC
Confidence 99999984 334789999999999999898888899999999998533456677777766542 4567777 79999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEee
Q 015435 190 PTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVC 269 (407)
Q Consensus 190 PtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~ 269 (407)
|||.+++.+++++|+++|++ +++||+||+|.++.+.+ . ... .....+++++++||||.|+++|+|+||+ ++
T Consensus 166 PTG~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~---~--~~~-~~~~~~~vi~~~SfSK~~~~~GlRiG~~--~~ 236 (357)
T PRK14809 166 PTGSEIPLDEVEALAERTDE-ETLVVVDEAYGEFAERP---S--AVA-LVEERDDVAVLRTFSKAYGLAGLRLGYA--VV 236 (357)
T ss_pred CCCcCCCHHHHHHHHHhCcc-CcEEEEechhhhccCCc---h--hHH-HHhhCCCEEEEecchhHhcCcchhheee--ec
Confidence 99999999999999999975 78999999999988642 1 111 2234578999999999999999999999 56
Q ss_pred cChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc
Q 015435 270 KTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHII 349 (407)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 349 (407)
+ ++ +.+.+..... ..+.+.++|.++..++.+. +++++.++.++++++++.+.|+... +
T Consensus 237 ~-~~----~~~~~~~~~~--~~~~~~~~~~~a~~~l~~~-------~~~~~~~~~~~~~r~~l~~~L~~~~----~---- 294 (357)
T PRK14809 237 P-EE----WADAYARVNT--PFAASELACRAGLAALDDD-------EHVERTVETARWAREYIREELDAPT----W---- 294 (357)
T ss_pred C-HH----HHHHHHHhCC--CCCCCHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHhcCcc----C----
Confidence 5 33 4444444432 3467888889888888753 4566777888889999999885432 2
Q ss_pred CCceeEEecCC-CHHHHHHhHhhccEEEcCCC--------eEEecCCCCCChhHHHHHHHHHHH
Q 015435 350 KQIGMFTFTGL-NSEQVAFMTKEYHIYMTSDG--------RISMAGLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 350 ~~~~~~~~~~~-~~~~~~~~l~~~gi~~~~gg--------Ris~~~~~~e~i~~~~~~l~~~l~ 404 (407)
+.+|+|.|+.+ +.+.+.+.+.++||.+.+|. ||+++ +++++++++++|+++++
T Consensus 295 ~~~g~f~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRls~~--~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 295 ESAGNFVLAEVGDASAVAEAAQERGVIVRDCTSFGLPECIRITCG--TREETERAVEVLNEVLA 356 (357)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHCCEEEEECccCCCCCeEEEecC--CHHHHHHHHHHHHHHhc
Confidence 45778888877 44444455677899999873 99987 46899999999999875
No 78
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=2.1e-39 Score=311.98 Aligned_cols=349 Identities=14% Similarity=0.104 Sum_probs=248.7
Q ss_pred CCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccc---cccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ---SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
..+++|+|+.|.| +..|.+.+.+.++.....+.. .....|++..|.+++|+++++++...++..+++++|++
T Consensus 28 ~~~~~i~l~~g~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~i-- 102 (416)
T PRK09440 28 RTPGAIMLGGGNP---AHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIAL-- 102 (416)
T ss_pred cCCCceeccCCCC---CccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEE--
Confidence 3467899999986 322444455555555443121 23357999999999999999999665566678899999
Q ss_pred cCCcccHHHHHHHHHHhh---cCCCeEEe-cCCCCCChHHHHhhcC----ceeeEEEeecC-CCCCcChhhHHHHHHcCC
Q 015435 106 CLSGTGSLRVGAEFLARH---YHQLTIYI-PQPTWGNHPKVFTLAG----LSVKTYRYYDP-ATRGLNFQGLLEDLRAAP 176 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~---~~gd~Vi~-~~p~y~~~~~~~~~~G----~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~ 176 (407)
|+|+++++.++...+... .+||.|++ .+|+|+.|.......| .....+++..+ ..+++|+++++ +. +
T Consensus 103 t~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~--~ 178 (416)
T PRK09440 103 TNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--ID--E 178 (416)
T ss_pred ccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cC--C
Confidence 999999999985444211 25899999 6999999988655333 22223333211 13678998887 23 4
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCcccc
Q 015435 177 SGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMG 256 (407)
Q Consensus 177 ~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 256 (407)
+++++++ ++||||||++++.+++++|+++|++|+++||+||+|..+... . ...+. .....+++|+++||||. +
T Consensus 179 ~~~~i~l-~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~-~--~~~~~--~~~~~~~vI~~~SfSK~-~ 251 (416)
T PRK09440 179 DTGAICV-SRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPG-I--IFSEA--TPLWNPNIILCMSLSKL-G 251 (416)
T ss_pred CceEEEE-ecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCC-c--chhhc--CccccCCeEEEeccccc-C
Confidence 4556555 999999999999999999999999999999999999754321 0 00111 01124689999999996 8
Q ss_pred ccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHH-HHHHHHHHHHHHHHH
Q 015435 257 LYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKA-MADRIISMRQQLFDA 335 (407)
Q Consensus 257 ~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~ 335 (407)
++|+|+||+ +++ + .+.+.+.........+++.+.|.++..++.+..+ .++..+ +++.++++++.+.+.
T Consensus 252 ~pGlRiG~~--i~~-~----~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~----~~~~~~~~~~~~~~r~~~~~~~ 320 (416)
T PRK09440 252 LPGVRCGIV--IAD-E----EIIEALSNMNGIISLAPGRLGPAIAAEMIESGDL----LRLSETVIRPFYRQKVQLAIAL 320 (416)
T ss_pred CCcceEEEE--eCC-H----HHHHHHHHHHHHhccCCCcHHHHHHHHHhccchH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 565 4 4555555555555567899999999999987642 233333 567778888888888
Q ss_pred HHhcCCCCCcccccCCceeEEecCC-----CHHHHHHhHhhccEEEcCC---------------C--eEEecCCCCCChh
Q 015435 336 LSARGTPGDWSHIIKQIGMFTFTGL-----NSEQVAFMTKEYHIYMTSD---------------G--RISMAGLSSKTVP 393 (407)
Q Consensus 336 l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gi~~~~g---------------g--Ris~~~~~~e~i~ 393 (407)
|.+.-....+.+..|.+|+|.|+.+ +.+.+...+.++||.+.|| + ||+++. ++++++
T Consensus 321 L~~~l~~~~~~~~~p~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~-~~~~l~ 399 (416)
T PRK09440 321 LRRYLPDEPCLIHKPEGAIFLWLWFKDLPITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ-DDEEIE 399 (416)
T ss_pred HHHhcccCCeEEecCCCceEEEEECCCCCCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEecC-CHHHHH
Confidence 7653100015567888999999854 3344445567789999873 1 899986 789999
Q ss_pred HHHHHHHHHHHh
Q 015435 394 HLTDAIHAAVTR 405 (407)
Q Consensus 394 ~~~~~l~~~l~~ 405 (407)
.++++|++++++
T Consensus 400 ~~i~~l~~~~~~ 411 (416)
T PRK09440 400 KGIAILAEEVEK 411 (416)
T ss_pred HHHHHHHHHHHH
Confidence 999999999875
No 79
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=4e-39 Score=298.02 Aligned_cols=322 Identities=20% Similarity=0.271 Sum_probs=256.0
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcc
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGT 110 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t 110 (407)
+++++|+.++ +..+.|+.+..++...+. ..+.| |.....++++++++++ +. .++++|++ ++|++
T Consensus 22 ~~~i~LssNe----nP~gp~~~~~~~~~~~~~----~~~rY-Pd~~~~~l~~a~a~~~-~~----~~~~~V~~--gnGsd 85 (356)
T COG0079 22 PGIIKLSSNE----NPYGPPPKVIEAIRAALD----KLNRY-PDPDYRELRAALAEYY-GV----VDPENVLV--GNGSD 85 (356)
T ss_pred ccceeecCCC----CCCCCCHHHHHHHHHHHH----hhccC-CCCcHHHHHHHHHHHh-CC----CCcceEEE--cCChH
Confidence 4799999886 222223344444434332 46667 5568999999999999 42 34589999 99999
Q ss_pred cHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCC
Q 015435 111 GSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNP 190 (407)
Q Consensus 111 ~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NP 190 (407)
+.+..+. ...+.+||+|+++.|+|..|...++..|++++.++.. + +.+|++.+.+.+. ++++++++ ||||||
T Consensus 86 e~i~~l~--~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~--~-~~~d~~~~~~~~~--~~~~lv~i-~nPNNP 157 (356)
T COG0079 86 ELIELLV--RAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLK--E-FRLDLDAILAAIR--DKTKLVFL-CNPNNP 157 (356)
T ss_pred HHHHHHH--HHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEeccc--c-cccCHHHHHHhhh--cCCCEEEE-eCCCCC
Confidence 9999995 4447799999999999999999999999999999994 3 8899999999998 46788888 999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeec
Q 015435 191 TGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCK 270 (407)
Q Consensus 191 tG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~ 270 (407)
||..++.++++++++.+.+ +.+||+||+|.+|... + ... +....+++++++||||+||++|+|+||+ ++.
T Consensus 158 TG~~~~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~~----~--~~~-l~~~~~nlivlRTfSKa~gLAGlRlGy~--ia~ 227 (356)
T COG0079 158 TGTLLPREELRALLEALPE-GGLVVIDEAYIEFSPE----S--SLE-LLKYPPNLIVLRTFSKAFGLAGLRVGYA--IAN 227 (356)
T ss_pred CCCCCCHHHHHHHHHhCCC-CcEEEEeCchhhcCCc----h--hhh-hccCCCCEEEEEecHHhhhcchhceeec--cCC
Confidence 9999999999999999998 9999999999999962 1 121 2235678999999999999999999998 455
Q ss_pred ChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC
Q 015435 271 TEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIK 350 (407)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 350 (407)
..+.+.+.....++ +.+.+++.++..++++. +++++.++++.+.++.+.+.|+..+. ..+.+.
T Consensus 228 -----~~~i~~l~~vr~p~--~v~~~a~~aa~aal~~~-------~~~~~~~~~~~~~r~rl~~~l~~~~~---~~v~pS 290 (356)
T COG0079 228 -----PELIAALNKVRPPF--NVSSPALAAAIAALRDA-------DYLEESVERIREERERLYAALKALGL---FGVFPS 290 (356)
T ss_pred -----HHHHHHHHHhcCCC--CCCHHHHHHHHHHcccH-------HHHHHHHHHHHHHHHHHHHHHHhCCC---CeecCC
Confidence 55666677776554 88889999999999876 56788889999999999999999872 235555
Q ss_pred CceeEEecCCC---HHHHHHhHhhccEEEcCCC---------eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 351 QIGMFTFTGLN---SEQVAFMTKEYHIYMTSDG---------RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 351 ~~~~~~~~~~~---~~~~~~~l~~~gi~~~~gg---------Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
. +.|+++... ...+.+.|.++||.++..+ ||+++ ++++.++++++|+++++..
T Consensus 291 ~-aNFvlv~~~~~~~~~l~~~L~~~giivR~~~~~~~~~~~lRitvg--t~een~~ll~AL~~~~~~~ 355 (356)
T COG0079 291 Q-ANFVLVRVPDAEAAALAEALLKKGILVRDCSSVGLLPGYLRITVG--TPEENDRLLAALREVLKGL 355 (356)
T ss_pred C-CcEEEEECCCccHHHHHHHHHHCCEEEEeCCCCCCCCCeEEEEeC--CHHHHHHHHHHHHHHHhcc
Confidence 5 456666553 3356666677899997651 99998 5677799999999988653
No 80
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=3.6e-39 Score=327.69 Aligned_cols=345 Identities=13% Similarity=0.083 Sum_probs=257.0
Q ss_pred CCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCC-CceEEeecC
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKD-NRVTTVQCL 107 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~-~~i~~~~t~ 107 (407)
++.++|+|+.|.+ .. +.|+.+.+++.+.+. . .++ ..|.+++++++++++...++...++ ++|++ |+
T Consensus 695 ~g~~vI~LsinE~---d~-ppPp~V~eAi~eal~--~---~~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIv--t~ 761 (1082)
T PLN02672 695 QESSLIHMDVDES---FL-PVPSAVKASIFESFV--R---QNI--SESETDPRPSILQFIKSNYGFPTDSCTEFVY--GD 761 (1082)
T ss_pred CCCCEEEEeCCCC---CC-CCCHHHHHHHHHHHh--h---cCC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEE--eC
Confidence 4578999999985 33 666666666666554 1 112 2356778999999996655665543 58999 99
Q ss_pred CcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCC
Q 015435 108 SGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACA 187 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p 187 (407)
|+++++..+. ...+++||.|+++.|+|+.|...++..|.+++.+|+..++++.+|++.+++++... .++.+++ ++|
T Consensus 762 Gs~elL~lll--~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~-~~~~I~L-~nP 837 (1082)
T PLN02672 762 TSLALFNKLV--LCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETV-KKPWVYI-SGP 837 (1082)
T ss_pred CHHHHHHHHH--HHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccC-CCCEEEE-ECc
Confidence 9999998884 44478999999999999999999999999999999954456888999999998621 2456666 888
Q ss_pred C-CCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHH---Hc---CCcEEEEEecCccccccCC
Q 015435 188 H-NPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFV---AD---GGECLVAQSYAKNMGLYGE 260 (407)
Q Consensus 188 ~-NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~---~~---~~~~i~~~s~sK~~~~~G~ 260 (407)
+ ||||.+++.+++++|+++|++||++||+||+|.++.+++......++.... .. ..++++++||||.|+++|+
T Consensus 838 nhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGL 917 (1082)
T PLN02672 838 TINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGH 917 (1082)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHH
Confidence 6 999999999999999999999999999999999998864221111111111 11 2379999999999999999
Q ss_pred CcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHH---hcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015435 261 RVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATI---LKDSTMYKEWTLELKAMADRIISMRQQLFDALS 337 (407)
Q Consensus 261 r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 337 (407)
|+||+ +++++++.+.+.. ..... .+....+.++..+ +.+.. ..|.+++.+.++.++++++++.+.|+
T Consensus 918 RIGyl--Iap~~eLi~~l~~----~~~~s--~~~~~~q~Aaaaalall~~~~--~~~~~~l~e~r~~Lk~rRd~L~e~L~ 987 (1082)
T PLN02672 918 EFGFL--ALNDSVLIDAFHS----APGLS--RPHSTLKYTIKKLLGLKNQKS--SDLLDGVAEQKKILKSRAERLKETLE 987 (1082)
T ss_pred HheeE--EeCCHHHHHHHHH----hhhhc--CCCcHHHHHHHHHHHHHhccC--cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 6776655555443 22111 2222334333333 32100 13556788889999999999999999
Q ss_pred hcCCCCCcccccCCceeEEecCC---------------------CHH-HHHHhHhhccEEEcCC---C-----eEEecCC
Q 015435 338 ARGTPGDWSHIIKQIGMFTFTGL---------------------NSE-QVAFMTKEYHIYMTSD---G-----RISMAGL 387 (407)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~-~~~~~l~~~gi~~~~g---g-----Ris~~~~ 387 (407)
+.+ +.+..|.||||.|+.+ +.+ +...++++.||.+.|| | ||+++.
T Consensus 988 ~~G----i~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~- 1062 (1082)
T PLN02672 988 ACG----WDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFAL- 1062 (1082)
T ss_pred HCC----CeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecC-
Confidence 987 7888999999999842 233 4567777789999997 2 999996
Q ss_pred CCCChhHHHHHHHHHHHh
Q 015435 388 SSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 388 ~~e~i~~~~~~l~~~l~~ 405 (407)
+++++++++++|+++.+-
T Consensus 1063 ~~e~LeeALerL~kf~~~ 1080 (1082)
T PLN02672 1063 EDSEFDRALKAIARFKEL 1080 (1082)
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 888999999999987653
No 81
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.2e-38 Score=300.21 Aligned_cols=338 Identities=17% Similarity=0.166 Sum_probs=247.8
Q ss_pred CCchhhhhHhhhhcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCC
Q 015435 15 EDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSP 94 (407)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~ 94 (407)
+..+.+..+.+.. ++.++++|+.|.+ ..+.|+.+.+++.+.+. . ...|+ ..+.+++|+++++++ +
T Consensus 5 ~~~~~~~~~~~~~-~~~~~i~l~~~~~----~~~~p~~~~~a~~~~~~--~--~~~y~-~~~~~~lr~~ia~~~-~---- 69 (356)
T PRK08056 5 GGNIREAATVLGI-SPDQLLDFSANIN----PLGMPVSLKRAIIDNLD--C--AERYP-DVEYRHLHQALARHH-Q---- 69 (356)
T ss_pred CccHHHHHHHhCC-ChhhEEEeccccC----CCCCCHHHHHHHHHHHH--h--cccCc-CccHHHHHHHHHHHh-C----
Confidence 3444555554442 2467999999974 22455566666655554 1 23574 457899999999998 3
Q ss_pred CCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHc
Q 015435 95 AIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRA 174 (407)
Q Consensus 95 ~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~ 174 (407)
+++++|++ |+|+++++.++.. .+.+|+ +++++|+|..|...++..|.+++.+|+.++.++.+| +++++.+.
T Consensus 70 -~~~~~i~i--t~Ga~~~l~~~~~---~l~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~- 140 (356)
T PRK08056 70 -VPASWILA--GNGETESIFAVVS---GLKPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALT- 140 (356)
T ss_pred -cChhhEEE--CCCHHHHHHHHHH---HhCCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhcc-
Confidence 34689999 9999999998843 345675 788899999999999999999999998533444555 35555554
Q ss_pred CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCcc
Q 015435 175 APSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKN 254 (407)
Q Consensus 175 ~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 254 (407)
++++++++ ++||||||.+++.+++++|+++|++++++||+||+|.+|.+.+. ...+. ....+++++++||||.
T Consensus 141 -~~~k~v~l-~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~---~~~~~~~i~~~S~SK~ 213 (356)
T PRK08056 141 -PDLDCLFL-CTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDET--GFIPQ---LADNPHLWVLRSLTKF 213 (356)
T ss_pred -CCCCEEEE-eCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcch--HHHHH---hccCCCEEEEEechhh
Confidence 56777776 99999999999999999999999999999999999999986421 11121 2334689999999999
Q ss_pred ccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHH
Q 015435 255 MGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFD 334 (407)
Q Consensus 255 ~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (407)
|+++|+|+||+ ++++++..+.+. ... ...+++.++|.++..++++. .+.++.+++++++++.+.+
T Consensus 214 ~~~~G~RiG~~--v~~~~~~~~~l~----~~~--~~~~~~~~~~~~a~~~l~~~-------~~~~~~~~~~~~~r~~l~~ 278 (356)
T PRK08056 214 YAIPGLRLGYL--VNSDDAAVARMR----RQQ--MPWSINAFAALAGEVILQDR-------AYQQATWQWLAEEGARFYQ 278 (356)
T ss_pred ccCcchhheee--ecCCHHHHHHHH----HhC--CCCchhHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHH
Confidence 99999999999 566555444433 222 23366778888888888754 3456778889999999999
Q ss_pred HHHhcCCCCCcccccCCceeEEecCC--CHHHHHHhHhhccEEEcCCC----------eEEecCCCCCChhHHHHHHHHH
Q 015435 335 ALSARGTPGDWSHIIKQIGMFTFTGL--NSEQVAFMTKEYHIYMTSDG----------RISMAGLSSKTVPHLTDAIHAA 402 (407)
Q Consensus 335 ~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~~~~gg----------Ris~~~~~~e~i~~~~~~l~~~ 402 (407)
.|+.++. +.+.++ +++|.|+.+ +.+.+...|.++||.+.+|. ||+++ ++++.+++++.|+++
T Consensus 279 ~L~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~~l~~~ 352 (356)
T PRK08056 279 ALCALPL---LTVWPG-RANYLFLRCERPDIDLQRALLTQRILIRSCANYPGLDSRYYRVAIR--SAAENERLLAALRNV 352 (356)
T ss_pred HHhcCCC---cEEcCC-CCcEEEEEcCCChHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEEc--CHHHHHHHHHHHHHH
Confidence 9988742 555554 567788865 33334444446899998752 99988 568889999999887
Q ss_pred HH
Q 015435 403 VT 404 (407)
Q Consensus 403 l~ 404 (407)
++
T Consensus 353 ~~ 354 (356)
T PRK08056 353 LT 354 (356)
T ss_pred Hc
Confidence 64
No 82
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.5e-39 Score=303.86 Aligned_cols=320 Identities=15% Similarity=0.163 Sum_probs=244.9
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcc
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGT 110 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t 110 (407)
.+++||+.|.+ +.+ .++.+.+++.+.+. ...|.|..|.+++|+++++++ + +++++|++ |+|++
T Consensus 29 ~~~i~l~~n~~--~~~--~~~~v~~a~~~~~~-----~~~~~p~~g~~~lr~~ia~~~-~-----~~~~~i~~--t~G~~ 91 (359)
T PRK03158 29 EKIVKLASNEN--PYG--PSPKVKEAIAAHLD-----ELALYPDGYAPELRTKVAKHL-G-----VDEEQLLF--GAGLD 91 (359)
T ss_pred CceEEecCCCC--CCC--CCHHHHHHHHHHHH-----HhhcCCCCcHHHHHHHHHHHh-C-----CCHHHEEE--CCCHH
Confidence 48999999975 222 24444444444443 234667789999999999998 4 34589999 99999
Q ss_pred cHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCC
Q 015435 111 GSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNP 190 (407)
Q Consensus 111 ~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NP 190 (407)
+++..+. ...+.+||.|++++|+|+.+...+...|.+++.+|+. ++++|++++++.+. ++++++++ ++||||
T Consensus 92 ~~l~~~~--~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~--~~~~~v~i-~~p~NP 163 (359)
T PRK03158 92 EVIQMIS--RALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAID--EQTKIVWI-CNPNNP 163 (359)
T ss_pred HHHHHHH--HHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcC--CCCCEEEE-eCCCCC
Confidence 9999884 3346799999999999999999999999999999983 46789999998876 56677776 899999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeec
Q 015435 191 TGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCK 270 (407)
Q Consensus 191 tG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~ 270 (407)
||.+++.+++.++++.|+ +|+++|+||+|.++.+++.... .+. .....+++++++||||.||++|+|+||+ +++
T Consensus 164 tG~~~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~--~~~-~~~~~~~vi~~~S~SK~~g~~GlRiG~~--v~~ 237 (359)
T PRK03158 164 TGTYVNHEELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPD--TLP-LLEKYENLIVLRTFSKAYGLAALRVGYG--IAS 237 (359)
T ss_pred CCCCCCHHHHHHHHHhCC-CCcEEEEECchHhhcCCccccc--HHH-HHHhcCCEEEEEechHhhcCcchhhehh--cCC
Confidence 999999999999988774 6999999999999887532111 112 2344578999999999999999999999 555
Q ss_pred ChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC
Q 015435 271 TEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIK 350 (407)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 350 (407)
++ +.+.+..... .++++.++|.++..++++. ++.++.++.++++++.+.+.|++.+ +.+.++
T Consensus 238 -~~----~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~ 299 (359)
T PRK03158 238 -EE----LIEKLNIARP--PFNTTRIAQYAAIAALEDQ-------AFLKECVEKNAEGLEQYYAFCKEYG----LFYYPS 299 (359)
T ss_pred -HH----HHHHHHHhcC--CCCCCHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHHHCC----CeeCCC
Confidence 44 4444444433 2478899999999999764 3455666778888889999888876 555544
Q ss_pred CceeEEecCC--CHHHHHHhHhhccEEEcCC---C-----eEEecCCCCCChhHHHHHHHHH
Q 015435 351 QIGMFTFTGL--NSEQVAFMTKEYHIYMTSD---G-----RISMAGLSSKTVPHLTDAIHAA 402 (407)
Q Consensus 351 ~~~~~~~~~~--~~~~~~~~l~~~gi~~~~g---g-----Ris~~~~~~e~i~~~~~~l~~~ 402 (407)
+|+|.|+.+ +.+.+.+.|.++||.+.|| | ||+++ +++++++++++|+++
T Consensus 300 -~g~~i~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~--~~~~~~~l~~al~~~ 358 (359)
T PRK03158 300 -QTNFIFVDTGRDANELFEALLKKGYIVRSGAALGFPTGVRITIG--LKEQNDKIIELLKEL 358 (359)
T ss_pred -cCcEEEEECCCCHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHh
Confidence 567888865 3444444445689999996 2 99988 678899999999875
No 83
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.9e-39 Score=302.67 Aligned_cols=325 Identities=18% Similarity=0.194 Sum_probs=244.2
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCc
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSG 109 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~ 109 (407)
..++|||+.|.+ +.+ .++.+.+++ .... ....+|++..| .++|+++++++ + +++++|++ |+|+
T Consensus 35 ~~~~i~l~~~~~--~~~--~~~~~~~al-~~~~---~~~~~Y~~~~g-~~lr~~ia~~~-~-----~~~~~i~~--t~G~ 97 (371)
T PRK05166 35 VPRIAKLGSNEN--PLG--PSPAVRRAF-ADIA---ELLRLYPDPQG-RALREAIAART-G-----VPADRIIL--GNGS 97 (371)
T ss_pred CcceEEcCCCCC--CCC--CCHHHHHHH-HHHH---HHhhcCCCCcH-HHHHHHHHHHh-C-----cCHHHEEE--cCCH
Confidence 458999999975 222 233444443 3332 23557987788 48999999988 4 24589999 9999
Q ss_pred ccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCC
Q 015435 110 TGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHN 189 (407)
Q Consensus 110 t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~N 189 (407)
++++.+++ ...+.+||.|+++.|+|+.+...++..|++++.++++ .++++|++++++.+. ++++++++ ++|||
T Consensus 98 ~~~l~~~~--~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~~~--~~~~~v~l-~~p~N 170 (371)
T PRK05166 98 EDLIAVIC--RAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVT--PDLGFDLDALCAAVA--RAPRMLMF-SNPSN 170 (371)
T ss_pred HHHHHHHH--HHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHhhh--cCCCEEEE-eCCCC
Confidence 99999884 3347899999999999999999999999999999983 347899999999887 45677766 99999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEee
Q 015435 190 PTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVC 269 (407)
Q Consensus 190 PtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~ 269 (407)
|||.+++.+++++|+++|++ ++++|+||+|.++.+++... .....+....+++++++||||.|+++|+|+||+ ++
T Consensus 171 PtG~~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~--~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~--i~ 245 (371)
T PRK05166 171 PVGSWLTADQLARVLDATPP-ETLIVVDEAYAEYAAGDDYP--SALTLLKARGLPWIVLRTFSKAYGLAGLRVGYG--LV 245 (371)
T ss_pred CCCCCCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcCcc--cHHHHHhhcCCCEEEEeechHhhhcchhheeee--ec
Confidence 99999999999999999875 88999999999998643211 112222233467999999999999999999998 56
Q ss_pred cChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc
Q 015435 270 KTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHII 349 (407)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 349 (407)
+++++.+.+.. ... ..+++.+.|.++..++.+. .++++.++.++++++.+.+.|++.+ +.+.
T Consensus 246 ~~~~l~~~~~~----~~~--~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~r~~l~~~L~~~g----~~~~- 307 (371)
T PRK05166 246 SDPELVGLLDR----VRT--PFNVNGAAQAAALAALDDE-------EHLAKGVALALAERERLKKELAEMG----YRIA- 307 (371)
T ss_pred CCHHHHHHHHH----hcc--CCCCCHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHHHCc----CeeC-
Confidence 66665554432 222 3467888888888888754 3466777888899999999999886 5543
Q ss_pred CCceeEEecCC--CHHHHHHhHhhccEEEcCCC--------eEEecCCCCCChhHHHHHHHHHH
Q 015435 350 KQIGMFTFTGL--NSEQVAFMTKEYHIYMTSDG--------RISMAGLSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 350 ~~~~~~~~~~~--~~~~~~~~l~~~gi~~~~gg--------Ris~~~~~~e~i~~~~~~l~~~l 403 (407)
+.+|+|.|+++ +.+.+.+.|.++||.+.|+. ||+++ ++++.+++.+.|+.++
T Consensus 308 p~~g~fl~~~~~~~~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~--~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 308 PSRANFLFFDARRPASAVAEALLRQGVIVKPWKQPGFETFIRVSIG--SPEENDHFVAALDKVL 369 (371)
T ss_pred CCcCCEEEEeCCCCHHHHHHHHHHCCeEEecCCCCCCCCeEEEEcC--CHHHHHHHHHHHHHHh
Confidence 45678889865 33444444445799999862 99988 4566788888877654
No 84
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=1.3e-38 Score=300.50 Aligned_cols=319 Identities=17% Similarity=0.201 Sum_probs=243.0
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCc
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSG 109 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~ 109 (407)
.++.++|+.|.+ ..+.|+.+.+++...+. ....|++. +.+++|+++++++ + +++++|++ |+|+
T Consensus 42 ~~~~i~l~~~~~----~~~~~~~~~~a~~~~~~----~~~~Y~~~-~~~~Lr~aia~~~-~-----v~~e~I~i--t~Gs 104 (370)
T PRK09105 42 AEGAVFLNANEC----PLGPSPAARDAAARSAA----LSGRYDLE-LEDDLRTLFAAQE-G-----LPADHVMA--YAGS 104 (370)
T ss_pred CCCcEEecCCCC----CCCCCHHHHHHHHHHHH----HhcCCCCc-hHHHHHHHHHHHh-C-----cChhhEEE--cCCh
Confidence 468899999974 22556666666655543 12458554 4899999999987 4 34689999 9999
Q ss_pred ccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCC
Q 015435 110 TGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHN 189 (407)
Q Consensus 110 t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~N 189 (407)
++++.++. ...+.+||+|++++|+|..|...++..|.+++.+++. .++.+|++++++. . ++++++++ ++|||
T Consensus 105 ~~ai~~~~--~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~-~--~~~~~v~l-~nP~N 176 (370)
T PRK09105 105 SEPLNYAV--LAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLR--ADGAHDVKAMLAA-D--PNAGLIYI-CNPNN 176 (370)
T ss_pred HHHHHHHH--HHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCC--CCCCCCHHHHHhc-C--CCCCEEEE-eCCCC
Confidence 99999985 3447799999999999999999999999999999983 3567899999875 2 45677666 99999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEee
Q 015435 190 PTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVC 269 (407)
Q Consensus 190 PtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~ 269 (407)
|||.+++.+++++|++.|+ +++++|+||+|.+|... .+...+....+++++++||||.||++|+|+||+ ++
T Consensus 177 PTG~~~~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~~------~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~--v~ 247 (370)
T PRK09105 177 PTGTVTPRADIEWLLANKP-AGSVLLVDEAYIHFSDA------PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLA--AA 247 (370)
T ss_pred CCCcCcCHHHHHHHHHhCC-CCcEEEEECchHHhccC------cchHHHHhhCCCEEEEecccHhhcCCccceeee--ec
Confidence 9999999999999998764 59999999999877542 122233345678999999999999999999999 55
Q ss_pred cChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc
Q 015435 270 KTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHII 349 (407)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 349 (407)
+ ++ +.+.+... ....++.+.|.++..++.+. +++++.+++++++++.+.+.|++.+ +.+..
T Consensus 248 ~-~~----~i~~l~~~---~~~~~~~~~~~aa~~~L~~~-------~~~~~~~~~~~~~r~~l~~~L~~~g----~~~~~ 308 (370)
T PRK09105 248 R-PD----LLAKLARF---GHNPLPVPAAAAGLASLRDP-------KLVPQRRAENAAVREDTIAWLKKKG----YKCTP 308 (370)
T ss_pred C-HH----HHHHHHhc---CCCCcCHHHHHHHHHHHhCH-------HHHHHHHHHHHHHHHHHHHHHHHCC----CCcCC
Confidence 5 44 44444333 23357778888888888764 4567777889999999999999887 67777
Q ss_pred CCceeEEecCC--CHHHHHHhHhhccEEEcCC-----C--eEEecCCCCCChhHHHHHHHHHHH
Q 015435 350 KQIGMFTFTGL--NSEQVAFMTKEYHIYMTSD-----G--RISMAGLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 350 ~~~~~~~~~~~--~~~~~~~~l~~~gi~~~~g-----g--Ris~~~~~~e~i~~~~~~l~~~l~ 404 (407)
+.+++|. +.+ +.+.+.+.|.++||.+..+ + ||+++ +++++++++++|+++++
T Consensus 309 ~~~~f~~-~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~Ris~~--~~~~~~~l~~al~~~~~ 369 (370)
T PRK09105 309 SQANCFM-VDVKRPAKAVADAMAKQGVFIGRSWPIWPNWVRVTVG--SEEEMAAFRSAFAKVMR 369 (370)
T ss_pred CCCcEEE-EeCCCCHHHHHHHHHHCCcEEecCCCCCCCeEEEEcC--CHHHHHHHHHHHHHHhh
Confidence 8888775 543 4444444444569988321 2 99988 56779999999988763
No 85
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-38 Score=301.72 Aligned_cols=317 Identities=15% Similarity=0.147 Sum_probs=238.7
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCc
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSG 109 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~ 109 (407)
+.++|+|+.|.+ +. +.++.+.++ +.... ....| |..+.+++|+++++++ + +++++|++ |+|+
T Consensus 51 ~~~~i~l~~n~~--p~--~~~~~v~~a-~~~~~----~~~~Y-p~~~~~~lr~~ia~~~-~-----~~~~~I~~--t~Ga 112 (380)
T PLN03026 51 PEDIVKLDANEN--PY--GPPPEVLEA-LGNMK----FPYVY-PDPESRRLRAALAEDS-G-----LESENILV--GCGA 112 (380)
T ss_pred ccceEEccCCCC--CC--CCCHHHHHH-HHhhH----hhccC-CCCCHHHHHHHHHHHh-C-----cChhhEEE--cCCH
Confidence 468999999973 12 333333333 33221 23446 4567899999999998 4 34689999 9999
Q ss_pred ccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCC
Q 015435 110 TGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHN 189 (407)
Q Consensus 110 t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~N 189 (407)
++++.+++ ...+.+||+|++++|+|..|...++..|++++.++. +.++.+|++++++.+.. ++++++++ ++|||
T Consensus 113 ~~~i~~~~--~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~~~~-~~~~~v~l-~~P~N 186 (380)
T PLN03026 113 DELIDLLM--RCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPR--TPDFSLDVPRIVEAVET-HKPKLLFL-TSPNN 186 (380)
T ss_pred HHHHHHHH--HHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec--CCCCCcCHHHHHHHHhc-cCCcEEEE-eCCCC
Confidence 99999984 334679999999999999999999999999999998 33578999999998831 45677777 89999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEee
Q 015435 190 PTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVC 269 (407)
Q Consensus 190 PtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~ 269 (407)
|||++++.+++++|++.+ +++|+||+|.+|.+.+ ... ......+++++++||||.||++|+|+||+ ++
T Consensus 187 PTG~~~~~~~l~~l~~~~----~~vi~DeaY~~~~~~~---~~~---~~~~~~~~viv~~SfSK~~glaGlRiGy~--~~ 254 (380)
T PLN03026 187 PDGSIISDDDLLKILELP----ILVVLDEAYIEFSTQE---SRM---KWVKKYDNLIVLRTFSKRAGLAGLRVGYG--AF 254 (380)
T ss_pred CCCCCCCHHHHHHHHhcC----CEEEEECcchhhcCCc---chH---HHHHhCCCEEEEecchHhhcCccccceee--ec
Confidence 999999999999997653 8999999999987642 111 12334578999999999999999999999 45
Q ss_pred cChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc
Q 015435 270 KTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHII 349 (407)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 349 (407)
+ + .+.+.+...... ++.+.++|.++..+|++. +++++.++.++++++++.+.|++++. ..+ .
T Consensus 255 ~-~----~~i~~l~~~~~~--~~~~~~~q~aa~~aL~~~-------~~~~~~~~~~~~~r~~l~~~L~~~~~---~~~-~ 316 (380)
T PLN03026 255 P-L----SIIEYLWRAKQP--YNVSVAAEVAACAALSNP-------KYLEDVKNALVEERERLFGLLKEVPF---LEP-Y 316 (380)
T ss_pred C-H----HHHHHHHHhcCC--CCCCHHHHHHHHHHhhCH-------HHHHHHHHHHHHHHHHHHHHHHHCCC---CeE-C
Confidence 5 4 344445444433 467888899999998764 44677788899999999999998762 333 5
Q ss_pred CCceeEEecCC----CHHHHHHhHhhccEEEcCCC--------eEEecCCCCCChhHHHHHHHHH
Q 015435 350 KQIGMFTFTGL----NSEQVAFMTKEYHIYMTSDG--------RISMAGLSSKTVPHLTDAIHAA 402 (407)
Q Consensus 350 ~~~~~~~~~~~----~~~~~~~~l~~~gi~~~~gg--------Ris~~~~~~e~i~~~~~~l~~~ 402 (407)
+.+++|.|+.+ +.+.+.+.|.++||.+.++. ||+++ +++++++++++|+++
T Consensus 317 p~~~~f~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~lRis~~--~~~~~~~l~~al~~~ 379 (380)
T PLN03026 317 PSDANFILCRVTSGRDAKKLKEDLAKMGVMVRHYNSKELKGYIRVSVG--KPEHTDALMEALKQL 379 (380)
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHCCeEEEECCCCCCCCEEEEecC--CHHHHHHHHHHHHHh
Confidence 56777888755 34445544457899998751 99988 456788888887653
No 86
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-38 Score=299.47 Aligned_cols=322 Identities=16% Similarity=0.158 Sum_probs=247.3
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcc
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGT 110 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t 110 (407)
...++|+.|.+ +.+.++.+++++.+.+. ...+|++. +.+++|+++++++ + +++++|++ |+|++
T Consensus 32 ~~~~~l~~~~~----~~~~~~~~~~a~~~~~~----~~~~Y~~~-~~~~Lr~~ia~~~-~-----~~~~~I~i--t~G~~ 94 (369)
T PRK08153 32 PFRARIGANES----GFGPSPSVIAAMREAAA----EIWKYGDP-ENHDLRHALAAHH-G-----VAPENIMV--GEGID 94 (369)
T ss_pred cceeEecCCCC----CCCCCHHHHHHHHHHHH----HhhcCCCC-ccHHHHHHHHHHh-C-----CCHHHEEE--cCCHH
Confidence 45679999974 33556666666655543 23568654 5899999999998 3 45689999 99999
Q ss_pred cHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCC
Q 015435 111 GSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNP 190 (407)
Q Consensus 111 ~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NP 190 (407)
+++.++. ...+.+||.|++++|+|+.+...+...|.+++.+|+. . .++|++++++.+.. ++++++++ ++||||
T Consensus 95 ~~l~~~~--~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~-~--~~~~~~~l~~~~~~-~~~~~i~l-~~P~NP 167 (369)
T PRK08153 95 GLLGLIV--RLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYR-D--DREDLDALLDAARR-ENAPLVYL-ANPDNP 167 (369)
T ss_pred HHHHHHH--HHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCC-C--CCCCHHHHHHHhcc-cCCcEEEE-eCCCCC
Confidence 9999984 3337899999999999999999999999999999973 2 35889998877642 34566666 899999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeec
Q 015435 191 TGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCK 270 (407)
Q Consensus 191 tG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~ 270 (407)
||.+++.+++++|+++|+ ++++||+||+|.++.+++ ...++ ....+++++++||||.||++|+|+||+ +++
T Consensus 168 tG~~~~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~---~~~~~---~~~~~~~i~~~SfSK~~g~~GlRiG~~--v~~ 238 (369)
T PRK08153 168 MGSWHPAADIVAFIEALP-ETTLLVLDEAYCETAPAG---AAPPI---DTDDPNVIRMRTFSKAYGLAGARVGYA--IGA 238 (369)
T ss_pred CCCCCCHHHHHHHHHhCC-CCcEEEEeCchhhhcCcc---cchhh---hhcCCCEEEEecchHhccCcchheeee--ecC
Confidence 999999999999999887 499999999999998753 12222 223568999999999999999999999 565
Q ss_pred ChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC
Q 015435 271 TEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIK 350 (407)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 350 (407)
++ +.+.+...... ++.+.++|.++..++++. +++++.++.++++++.+.+.|++.| +... |
T Consensus 239 -~~----~~~~l~~~~~~--~~~s~~~q~~~~~~l~~~-------~~~~~~~~~~~~~r~~~~~~L~~~g----~~~~-p 299 (369)
T PRK08153 239 -PG----TIKAFDKVRNH--FGMNRIAQAAALAALKDQ-------AYLAEVVGKIAAARDRIAAIARANG----LTPL-P 299 (369)
T ss_pred -HH----HHHHHHHhhcC--CCCCHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHHHCC----CccC-C
Confidence 44 44444444433 468889999999999764 4466778889999999999998877 5533 5
Q ss_pred CceeEEecCCC-----HHHHHHhHhhccEEEc-CC-----C--eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 351 QIGMFTFTGLN-----SEQVAFMTKEYHIYMT-SD-----G--RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 351 ~~~~~~~~~~~-----~~~~~~~l~~~gi~~~-~g-----g--Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
.+++|.|+.+. .+.+.+.+.++||.+. |+ + ||+++ +++++++++++|+++++.+
T Consensus 300 ~~~~f~~~~~~~~~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~--~~~~~~~~~~al~~~~~~~ 366 (369)
T PRK08153 300 SATNFVAIDCGRDGAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCG--PDEELDLFAEALPEALEAA 366 (369)
T ss_pred CcCcEEEEECCCCcccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHHHHHh
Confidence 67888888652 3334444446899995 43 1 88988 6789999999999988653
No 87
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=3.2e-38 Score=297.76 Aligned_cols=320 Identities=16% Similarity=0.139 Sum_probs=230.2
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcc
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGT 110 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t 110 (407)
.++|||+.|.. ..+.|+.+.+++.+.+. ....|++. +..++|+++++++ + +++++|++ |+|++
T Consensus 22 ~~~i~l~~~~n----~~~~~~~~~~a~~~~~~----~~~~Y~~~-~~~~Lr~aia~~~-~-----v~~~~I~i--t~G~~ 84 (360)
T PRK07392 22 DAILDFSASIN----PLGPPESVIAAIQSALS----ALRHYPDP-DYRELRLALAQHH-Q-----LPPEWILP--GNGAA 84 (360)
T ss_pred ccEEEeCCcCC----CCCCCHHHHHHHHHHHH----HhhcCCCc-CHHHHHHHHHHHh-C-----cChhhEEE--CCCHH
Confidence 57899998863 22445566666554443 25568654 5689999999998 3 45689999 99999
Q ss_pred cHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCC---CcChhhHHHHHHcCCCCcEEEEecCC
Q 015435 111 GSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATR---GLNFQGLLEDLRAAPSGAIVLLHACA 187 (407)
Q Consensus 111 ~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~---~~d~~~l~~~i~~~~~~~~v~i~~~p 187 (407)
+++.+++ ..+.+||+|++++|+|..+...++..|++++.++++++.++ ..+++++++.. ++++++++ +||
T Consensus 85 ~~i~~~~---~~l~~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l-~nP 157 (360)
T PRK07392 85 ELLTWAG---RELAQLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL---TPNDGLLL-NNP 157 (360)
T ss_pred HHHHHHH---HHhCCCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc---cCCCEEEE-eCC
Confidence 9999884 23457899999999999999999999999999998533322 23455554432 34566555 899
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEE
Q 015435 188 HNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSI 267 (407)
Q Consensus 188 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 267 (407)
|||||.+++++++.++ |+++++ +|+||+|.+|.+++. ..+........+++++++||||.|+++|+|+||+
T Consensus 158 ~NPTG~~~~~~~l~~l---~~~~~~-~IiDE~y~~~~~~~~---~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~-- 228 (360)
T PRK07392 158 HNPTGKLWSREAILPL---LEQFAL-VVVDEAFMDFLPPDA---EQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYA-- 228 (360)
T ss_pred CCCCCCCcCHHHHHHH---HHHCCE-EEEECchhhhccCcc---ccchHHHhhcCCCEEEEEechhhhcCCchheeee--
Confidence 9999999997766555 678885 666999999987542 1222222344578999999999999999999999
Q ss_pred eecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Q 015435 268 VCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSH 347 (407)
Q Consensus 268 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 347 (407)
+++ ++ +.+.+..... .++++.++|.++..++++. .+.+..++.++++++.+.+.|+.++. +.+
T Consensus 229 v~~-~~----~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~-------~~~~~~~~~~~~~r~~l~~~L~~~~~---~~~ 291 (360)
T PRK07392 229 IAH-PD----RLQRWQQWRD--PWPVNGLAAAAAIAALADR-------DFQQQTWAWLPPAREALFQGLASLPG---LTP 291 (360)
T ss_pred eCC-HH----HHHHHHhhCC--CCCCCHHHHHHHHHHhccH-------HHHHHHHHHHHHHHHHHHHHHHhCCC---cEE
Confidence 565 33 3344443332 3478899999999999865 23445566788889999999987632 554
Q ss_pred ccCCceeEEecCC--CH-HHHHHhHhhccEEEcCCC----------eEEecCCCCCChhHHHHHHHHHH
Q 015435 348 IIKQIGMFTFTGL--NS-EQVAFMTKEYHIYMTSDG----------RISMAGLSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 348 ~~~~~~~~~~~~~--~~-~~~~~~l~~~gi~~~~gg----------Ris~~~~~~e~i~~~~~~l~~~l 403 (407)
. +.+++|.|+.+ +. ++...+++++||.+.||. ||+++. .++.+++.+.|..++
T Consensus 292 ~-~~~~~fl~~~~~~~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~~~l~~al~~~~ 357 (360)
T PRK07392 292 L-PSAANFLLVQSQGSALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRT--EAENQRLLEALAAIL 357 (360)
T ss_pred C-CCCCCEEEEEcCCCHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCC--HHHHHHHHHHHHHHh
Confidence 4 46788999866 33 345566788899998861 999985 344566666665554
No 88
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2e-38 Score=298.96 Aligned_cols=317 Identities=18% Similarity=0.235 Sum_probs=238.1
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcc
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGT 110 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t 110 (407)
.++|+|+.|.+ .. +.++.+.+++.+.+. .....|+ ..+.+++|+++++++ + +++++|++ |+|++
T Consensus 24 ~~~i~l~~~~~---~~-~~~~~~~~a~~~~~~---~~~~~y~-~~~~~~lr~aia~~~-~-----~~~~~I~i--t~G~~ 87 (353)
T PRK05387 24 AKLIKLNTNEN---PY-PPSPKVLEAIRAALG---DDLRLYP-DPNADALRQAIAAYY-G-----LDPEQVFV--GNGSD 87 (353)
T ss_pred cceeeccCCCC---CC-CCCHHHHHHHHHHhh---hhhhcCC-CCcHHHHHHHHHHHh-C-----CCHHHEEE--cCCHH
Confidence 57899999985 21 334445555544443 2245684 457799999999998 3 45689999 99999
Q ss_pred cHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCC
Q 015435 111 GSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNP 190 (407)
Q Consensus 111 ~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NP 190 (407)
+++.+++ ...+.+||.|++++|+|+.+...++..|++++.++++ +++++|++++++ .++++++ ++||||
T Consensus 88 ~al~~~~--~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~------~~~~v~~-~~P~NP 156 (353)
T PRK05387 88 EVLAHAF--LAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLD--DDFSIDVEDYLR------PNGGIIF-PNPNAP 156 (353)
T ss_pred HHHHHHH--HHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHh------cCCEEEE-eCCCCC
Confidence 9999995 3447899999999999999999999999999999983 357899998864 2456555 899999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeec
Q 015435 191 TGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCK 270 (407)
Q Consensus 191 tG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~ 270 (407)
||.+++.+++++|++.++ ++++|+||+|.+|... ...+ +....+++++++||||.|+++|+|+||+ +++
T Consensus 157 tG~~~~~~~~~~l~~~~~--~~~livDe~y~~~~~~----~~~~---~~~~~~~~i~~~S~SK~~~~~GlR~G~~--~~~ 225 (353)
T PRK05387 157 TGIALPLAEIERILAANP--DSVVVIDEAYVDFGGE----SAIP---LIDRYPNLLVVQTFSKSRSLAGLRVGFA--IGH 225 (353)
T ss_pred CCCCCCHHHHHHHHHhCC--CcEEEEeCcccccCCc----chHH---HHhhCCCEEEEEehhHhhcchhhhceee--ecC
Confidence 999999999999987653 9999999999876421 1122 2234577999999999999999999999 454
Q ss_pred ChhhHHHHHHHHhhhhhcc-cCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc
Q 015435 271 TEDVASRVESQLKLVIRPM-YSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHII 349 (407)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 349 (407)
++ +.+.+....... ..+.+.++|.++..++.+. .+.++.+++++++++.+.+.|++.+ +.+.
T Consensus 226 -~~----~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~- 288 (353)
T PRK05387 226 -PE----LIEALNRVKNSFNSYPLDRLAQAGAIAAIEDE-------AYFEETRAKVIATRERLVEELEALG----FEVL- 288 (353)
T ss_pred -HH----HHHHHHHhhccCCCCCcCHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHHHCC----CeEC-
Confidence 44 444444443322 3367788899888888764 3356777888999999999999886 5544
Q ss_pred CCceeEEecCC---CHHHHHHhHhhccEEEcCCC--------eEEecCCCCCChhHHHHHHHHHHH
Q 015435 350 KQIGMFTFTGL---NSEQVAFMTKEYHIYMTSDG--------RISMAGLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 350 ~~~~~~~~~~~---~~~~~~~~l~~~gi~~~~gg--------Ris~~~~~~e~i~~~~~~l~~~l~ 404 (407)
+.+++|.|+.+ +.+.+.+.|.++||.+...+ ||+++ +++++++++++|+++++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~--~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 289 PSKANFVFARHPSHDAAELAAKLRERGIIVRHFNKPRIDQFLRITIG--TDEEMEALVDALKEILA 352 (353)
T ss_pred CCcCcEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC--CHHHHHHHHHHHHHHhh
Confidence 45667778755 44555555567899885431 99987 56889999999998875
No 89
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.9e-38 Score=296.76 Aligned_cols=333 Identities=16% Similarity=0.188 Sum_probs=249.6
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCc
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSG 109 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~ 109 (407)
..+.|+|+.|.. .. +.++.+.+++.+.+. ......|.+..|.+++|+++++++ + +++++|++ |+|+
T Consensus 27 ~~~~i~l~~~~~---~~-~~~~~~~~a~~~~~~--~~~~~~y~~~~g~~~lr~~ia~~l-~-----~~~~~v~~--~~g~ 92 (380)
T PRK06225 27 DKEMIWMGQNTN---HL-GPHEEVREAMIRCIE--EGEYCKYPPPEGFPELRELILKDL-G-----LDDDEALI--TAGA 92 (380)
T ss_pred cCCeEEccCCCC---CC-CCCHHHHHHHHHHHh--cCCCCCCCCCcchHHHHHHHHHhc-C-----CCCCcEEE--eCCH
Confidence 468999998863 22 445555555555554 233456888889999999999988 4 34579999 9999
Q ss_pred ccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeec-CCCCCcChhhHHHHHHcCCCCcEEEEecCCC
Q 015435 110 TGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYD-PATRGLNFQGLLEDLRAAPSGAIVLLHACAH 188 (407)
Q Consensus 110 t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~ 188 (407)
++++.+++. ..+.+||+|++++|+|..+...++..|.+++.+++.+ +.++.+|++.+++.+. ++++++++ ++|+
T Consensus 93 t~al~~~~~--~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~--~~~~~v~l-~~p~ 167 (380)
T PRK06225 93 TESLYLVMR--AFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMD--ENTRLIYL-IDPL 167 (380)
T ss_pred HHHHHHHHH--HhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcC--CCceEEEE-eCCC
Confidence 999999853 3477999999999999999999999999999998742 2246799999999887 55677777 6999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEe
Q 015435 189 NPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIV 268 (407)
Q Consensus 189 NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v 268 (407)
||||.+++.+++++|+++|++||+++|+||+|.+|..+. .....+ ..++++++.||||.+|++|+|+||+ +
T Consensus 168 NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-----~~~~~~--~~~~~i~~~s~SK~~g~~G~RiG~i--~ 238 (380)
T PRK06225 168 NPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREH-----TLAAEY--APEHTVTSYSFSKIFGMAGLRIGAV--V 238 (380)
T ss_pred CCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccC-----Cchhhc--CCCCEEEEeechhhcCCccceeEEE--e
Confidence 999999999999999999999999999999998876431 111111 2367899999999999999999999 5
Q ss_pred ecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-c
Q 015435 269 CKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWS-H 347 (407)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~ 347 (407)
++ +++.+ .+..... ...+.+.++|.++...++... ++.++.++.++++++++.+.|+++.. .. .
T Consensus 239 ~~-~~l~~----~~~~~~~-~~~~~~~~~~~~a~~~l~~~~------~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~ 303 (380)
T PRK06225 239 AT-PDLIE----VVKSIVI-NDLGTNVIAQEAAIAGLKVKD------EWIDRIRRTTFKNQKLIKEAVDEIEG---VFLP 303 (380)
T ss_pred cC-HHHHH----HHHHHHh-cccCCCHHHHHHHHHHHhcch------HHHHHHHHHHHHHHHHHHHHHHhCcC---Cccc
Confidence 65 44444 3433322 234677888888877776532 44566677778888888888887521 22 1
Q ss_pred ccCCceeEEecCC-----CHHHHHHhHhhccEEEcCC-------C----eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 348 IIKQIGMFTFTGL-----NSEQVAFMTKEYHIYMTSD-------G----RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 348 ~~~~~~~~~~~~~-----~~~~~~~~l~~~gi~~~~g-------g----Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
..+.++.|.|+.+ +.+.+...|.++||.+.|| | |++++. +++++++++++|+++++++
T Consensus 304 ~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~~-~~e~l~~~~~~l~~~~~~~ 377 (380)
T PRK06225 304 VYPSHGNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFSI-PREQVEVFCEEFPDVVETL 377 (380)
T ss_pred cCCCCCeEEEEEcccccCCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeCC-CHHHHHHHHHHHHHHHHHh
Confidence 2344566667643 4455555555789999885 2 999986 7899999999999998653
No 90
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-38 Score=277.57 Aligned_cols=314 Identities=18% Similarity=0.230 Sum_probs=259.4
Q ss_pred ccCCCCCCcHHHHHHHHHHHhCCC--CCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHh-h
Q 015435 69 KEYLPIVGLVDFNKLSAKLILGAD--SPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFT-L 145 (407)
Q Consensus 69 ~~y~~~~g~~~l~~~~a~~~~~~~--~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~-~ 145 (407)
..|.+-.|++.+|+++|+++.... ....+|+++++ |+|+|.+++++. ..+.+|||.-++|.|.|+++...++ +
T Consensus 115 a~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv--~~G~T~ane~l~--fcLadpgdafLvPtPyY~gfdrdl~~r 190 (471)
T KOG0256|consen 115 AMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVV--TNGATSANETLM--FCLADPGDAFLVPTPYYPGFDRDLRWR 190 (471)
T ss_pred hhcccccCchHHHHHHHHHHHHHhCCCCccCccceEE--ecccchhhHHHH--HHhcCCCceeeecCCCCCcccccceec
Confidence 456666799999999999993333 44567899999 999999999994 5557899999999999999988888 6
Q ss_pred cCceeeEEEeecCCCCCcChhhHHHHHHcC----CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccc
Q 015435 146 AGLSVKTYRYYDPATRGLNFQGLLEDLRAA----PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQ 221 (407)
Q Consensus 146 ~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~----~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~ 221 (407)
-|+++++|.+...+++.++++++++++.+. .+-+.+++ .||+||.|++++++++..++++|.++++.+|+||+|+
T Consensus 191 Tgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvli-tNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya 269 (471)
T KOG0256|consen 191 TGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLI-TNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYA 269 (471)
T ss_pred cCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEE-eCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhc
Confidence 799999999987778899999999988653 23466666 8999999999999999999999999999999999999
Q ss_pred cccCCCCCchhHHHHHHHH----cCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhH
Q 015435 222 GFASGSLDADAQSVRMFVA----DGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHG 297 (407)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~----~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (407)
+-+++.. +..++..+.. ..+.+.++.|+||-+|+||+|+|.+ .+.|+++... ..+... +...+...
T Consensus 270 ~sVF~~~--~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGvi--YS~ne~Vvsa----A~kmss--f~~vSs~t 339 (471)
T KOG0256|consen 270 GSVFDKS--EFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVI--YSNNEDVVSA----ATKMSS--FGLVSSQT 339 (471)
T ss_pred ccccCcc--CceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEE--EecChHHHHH----HHHHhh--ccCCcHHH
Confidence 9999754 4555544432 3468899999999999999999999 5888765443 333332 23778889
Q ss_pred HHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCC---------CHH--HHH
Q 015435 298 ASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL---------NSE--QVA 366 (407)
Q Consensus 298 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~---------~~~--~~~ 366 (407)
|..+..+|.|..+.+ .++.+.++|++.+..++.+.|+++| +.+...++|+|.|+++ ..| ...
T Consensus 340 Q~~la~LLSD~~f~~---~yl~en~~Rl~~rh~~~~~gLk~lg----I~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~ 412 (471)
T KOG0256|consen 340 QYLLASLLSDEEFTR---EYLRENNKRLRIRHRYIVEGLKALG----IPCLKSNAGLFCWVDLRKLLTSLTFEGELELWE 412 (471)
T ss_pred HHHHHHHhchHHHHH---HHHHHHHHHHHHHHHHHHhhHHhcC----CceeecCCeeEEEEEhHHhcCcCChHHHHHHHH
Confidence 999999999975433 3577888999999999999999999 7889999999999976 223 355
Q ss_pred HhHhhccEEEcCCC----------eEEecCCCCCChhHHHHHHHHHHH
Q 015435 367 FMTKEYHIYMTSDG----------RISMAGLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 367 ~~l~~~gi~~~~gg----------Ris~~~~~~e~i~~~~~~l~~~l~ 404 (407)
.++++.++.++||. |++|+...++.++.+++||++++.
T Consensus 413 ~i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 413 RILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred HHHHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Confidence 77787799999984 999998666777779999999875
No 91
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.6e-38 Score=296.56 Aligned_cols=321 Identities=20% Similarity=0.159 Sum_probs=245.6
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCc
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSG 109 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~ 109 (407)
++++|+|+.|.+ ..+.|+.+++++.+.+. ......|++ .|.+++|+++++++ +.. ..++|++ |+|+
T Consensus 25 ~~~~i~l~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~Y~~-~~~~~lr~~ia~~~-~~~----~~~~I~~--t~G~ 90 (356)
T PRK04870 25 ATGMVKLDAMEN----PYRLPAELRAELGERLA--EVALNRYPD-PRAAALKAALRAAM-GVP----AGADVLL--GNGS 90 (356)
T ss_pred CCCceeCcCCCC----CCCCCHHHHHHHHHHhh--ccccccCCC-CCHHHHHHHHHHHh-CcC----CCCcEEE--cCCH
Confidence 468999999974 33556677777766664 233567865 68899999999998 431 1258999 9999
Q ss_pred ccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCC
Q 015435 110 TGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHN 189 (407)
Q Consensus 110 t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~N 189 (407)
++++.++.. ..+.+||+|++++|+|..+...++..|++++.++++ +++++|++++++.+.. .+++++++ ++|||
T Consensus 91 ~~~i~~~~~--~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~~~~-~~~~~v~l-~~p~N 164 (356)
T PRK04870 91 DELIQLLAL--ACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLT--ADFTLDLPAMLAAIAE-HRPALVFL-AYPNN 164 (356)
T ss_pred HHHHHHHHH--HhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhc-CCCCEEEE-cCCCC
Confidence 999999853 336899999999999999999999999999999983 3578999999998863 25677777 89999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEee
Q 015435 190 PTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVC 269 (407)
Q Consensus 190 PtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~ 269 (407)
|||.+++.+++++|+++| ++++|+||+|.+|...+ ..+ . ....+++++++|||| ++++|+|+||+ ++
T Consensus 165 PtG~~~~~~~~~~i~~~~---~~~ii~De~y~~~~~~~----~~~--~-~~~~~~vi~~~S~SK-~~~~GlRiG~~--i~ 231 (356)
T PRK04870 165 PTGNLFDDADVERIIEAA---PGLVVVDEAYQPFAGDS----WLP--R-LARFPNLLVMRTVSK-LGLAGLRLGYL--AG 231 (356)
T ss_pred CCCCCCCHHHHHHHHHHC---CCEEEEECCchhhcCcc----hHH--H-HhhCCCEEEEecchh-hhhHHHhhhhh--hC
Confidence 999999999999999998 67899999999886531 111 1 233468999999999 89999999999 45
Q ss_pred cChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc
Q 015435 270 KTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHII 349 (407)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 349 (407)
+ ++ +.+.+..... .++.+.++|.++..++++. +.+++.+++++++++.+.+.|++++. +.+.
T Consensus 232 ~-~~----~i~~~~~~~~--~~~~~~~~q~~a~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~- 293 (356)
T PRK04870 232 H-PA----WIAELDKVRP--PYNVNVLTQATALFALEHV-------DVLDAQAAQLRAERTRLAAALAALPG---VTVF- 293 (356)
T ss_pred C-HH----HHHHHHHccC--CCcCCHHHHHHHHHHHhCH-------HHHHHHHHHHHHHHHHHHHHHHhCCC---cEEC-
Confidence 5 44 4444444332 2367778888888887754 33567778888999999999988732 5444
Q ss_pred CCceeEEecCC-CHHHHHHhHhhccEEEcCCC----------eEEecCCCCCChhHHHHHHHHHH
Q 015435 350 KQIGMFTFTGL-NSEQVAFMTKEYHIYMTSDG----------RISMAGLSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 350 ~~~~~~~~~~~-~~~~~~~~l~~~gi~~~~gg----------Ris~~~~~~e~i~~~~~~l~~~l 403 (407)
+.+++|.|+.+ +.+.+.+.|+++||.+.++. ||+++ +.+++++++++|++++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 294 PSAANFILVRVPDAAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG--TPEENAQFLAALKAAL 356 (356)
T ss_pred CCCCeEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC--CHHHHHHHHHHHHHhC
Confidence 45667888877 44556677788999998751 99988 5688899999888753
No 92
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.6e-37 Score=287.89 Aligned_cols=312 Identities=15% Similarity=0.132 Sum_probs=232.4
Q ss_pred CCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCC
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLS 108 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g 108 (407)
.+.++|+|+.|++ .. +.|+.+++++.+.+. ......|+ ..|.+++|+++++++ +..+ +++++|++ |+|
T Consensus 17 ~~~~~i~l~~~~~---~~-~~p~~~~~~~~~~~~--~~~~~~Y~-~~~~~~Lr~aia~~~-~~~~--~~~~~i~i--t~G 84 (335)
T PRK14808 17 EKRDRTYLALNEN---PF-PFPEDLVDEVFRRLN--SDTLRIYY-DSPDEELIEKILSYL-DTDF--LSKNNVSV--GNG 84 (335)
T ss_pred CCCceeEecCCCC---CC-CCCHHHHHHHHHHhh--hhhhhcCC-CCChHHHHHHHHHHh-CCCC--CCcceEEE--cCC
Confidence 3469999999984 33 667677777776664 22334464 458999999999999 4333 56799999 999
Q ss_pred cccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCC
Q 015435 109 GTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAH 188 (407)
Q Consensus 109 ~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~ 188 (407)
+++++.++.. .+ |.|++++|+|+.|...++.+|.+++.+|++ + ++.++... + ..++++++ ++||
T Consensus 85 a~~~i~~~~~---~~---d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~-~-~~~~~~~~----~---~~~~~i~i-~nP~ 148 (335)
T PRK14808 85 ADEIIYVMML---MF---DRSVFFPPTYSCYRIFAKAVGAKFLEVPLT-K-DLRIPEVN----V---GEGDVVFI-PNPN 148 (335)
T ss_pred HHHHHHHHHH---Hh---CcEEECCCCHHHHHHHHHHcCCeEEEecCC-C-cCCCChhH----c---cCCCEEEE-eCCC
Confidence 9999999842 23 789999999999999999999999999983 2 23333221 2 23566665 9999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEe
Q 015435 189 NPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIV 268 (407)
Q Consensus 189 NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v 268 (407)
||||.+++.+++++|+ +++++||+||+|.+|... ...+ .....+++++++||||.|+++|+|+||+ +
T Consensus 149 NPTG~~~s~~~l~~l~----~~~~~ii~DE~Y~~f~~~----~~~~---~~~~~~~vi~~~S~SK~~~l~GlRvG~~--v 215 (335)
T PRK14808 149 NPTGHVFEREEIERIL----KTGAFVALDEAYYEFHGE----SYVD---LLKKYENLAVIRTFSKAFSLAAQRIGYV--V 215 (335)
T ss_pred CCCCCCcCHHHHHHHH----hcCCEEEEECchhhhcCC----chHH---HHHhCCCEEEEEechhhccCcccceEEE--E
Confidence 9999999999999885 589999999999988521 1222 2234568999999999999999999999 5
Q ss_pred ecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc
Q 015435 269 CKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHI 348 (407)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 348 (407)
++ +.+.+.+..... .++.+.++|.++..++++. ++..+.++.++++++.+.+.|++.| +.+.
T Consensus 216 ~~-----~~~~~~l~~~~~--~~~~~~~~q~a~~~~l~~~-------~~~~~~~~~~~~~r~~l~~~L~~~g----~~~~ 277 (335)
T PRK14808 216 SS-----EKFIDAYNRVRL--PFNVSYVSQMFAKVALDHR-------EIFEERTKFIVEERERMKSALREMG----YRIT 277 (335)
T ss_pred eC-----HHHHHHHHHhcC--CCCCCHHHHHHHHHHHhCH-------HHHHHHHHHHHHHHHHHHHHHHHCC----CEEC
Confidence 66 345555544442 3467788898888888754 3345566677788899999999887 6766
Q ss_pred cCCceeEEecCC---CHHHHHHhHhhccEEEcCCC---eEEecCCCCCChhHHHHHHHHH
Q 015435 349 IKQIGMFTFTGL---NSEQVAFMTKEYHIYMTSDG---RISMAGLSSKTVPHLTDAIHAA 402 (407)
Q Consensus 349 ~~~~~~~~~~~~---~~~~~~~~l~~~gi~~~~gg---Ris~~~~~~e~i~~~~~~l~~~ 402 (407)
.+.|+ |.|+.+ +.+.+.+.|.++||.+.... ||+++ +.++.+++++.|+++
T Consensus 278 ~~~g~-f~~~~l~~~~~~~~~~~l~~~Gi~V~~~~~~~Risi~--~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 278 DSRGN-FVFIFMEKEEKERLLEHLRAKNIAVRSFREGVRITIG--KREENDMILKELEVF 334 (335)
T ss_pred CCCCe-EEEEeCCCccHHHHHHHHHHCCeEEEECCCCeEEecC--CHHHHHHHHHHHHhh
Confidence 77665 557654 34556666777999998743 99988 468888888888753
No 93
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.1e-37 Score=287.98 Aligned_cols=319 Identities=18% Similarity=0.202 Sum_probs=237.2
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcc
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGT 110 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t 110 (407)
+..++|+.|.+ .. +.|+.+++++.+.+. ......|++ .+.+++|+++++++ + +++++|++ |+|++
T Consensus 22 ~~~~~l~~~~~---~~-~~p~~~~~a~~~~~~--~~~~~~y~~-~~~~~lr~~ia~~~-~-----~~~~~i~i--t~G~~ 86 (351)
T PRK14807 22 PYKYKMDANET---PF-ELPEEVIKNIQEIVK--SSQVNIYPD-PTAEKLREELARYC-S-----VVPTNIFV--GNGSD 86 (351)
T ss_pred CceeEccCCCC---CC-CCCHHHHHHHHHHhh--cCcccCCCC-ccHHHHHHHHHHHh-C-----CCcccEEE--ecCHH
Confidence 46799999975 32 556677777665554 234566754 45789999999997 3 34589999 99999
Q ss_pred cHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCC
Q 015435 111 GSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNP 190 (407)
Q Consensus 111 ~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NP 190 (407)
+++.+++. ..+.+||+|++++|+|..+...++..|.+++.++++ .++++|++++++.+.. .+++++++ ++||||
T Consensus 87 ~~l~~~~~--~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~-~~~k~v~l-~~p~NP 160 (351)
T PRK14807 87 EIIHLIML--AFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLK--EDYTYDVGSFIKVIEK-YQPKLVFL-CNPNNP 160 (351)
T ss_pred HHHHHHHH--HhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHHhhc-cCCCEEEE-eCCCCC
Confidence 99998853 347899999999999999999999999999999983 3478999999998872 25677777 799999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeec
Q 015435 191 TGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCK 270 (407)
Q Consensus 191 tG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~ 270 (407)
||.+++.+++.+| |++++.++|+||+|.++. +. ...+ .....+++++++||||.|+++|+|+||+ +++
T Consensus 161 tG~~~~~~~l~~l---~~~~~~~~ivDe~y~~~~-~~---~~~~---~~~~~~~vi~~~S~SK~~~~~GlRiG~~--v~~ 228 (351)
T PRK14807 161 TGSVIEREDIIKI---IEKSRGIVVVDEAYFEFY-GN---TIVD---VINEFENLIVLRTLSKAFGLAGLRVGYA--VAN 228 (351)
T ss_pred CCCCCCHHHHHHH---HHhCCCEEEEeCcchhhc-cc---chHH---HhhhCCCEEEEecchHhcccchhceeee--ecC
Confidence 9999998887777 556677899999998874 21 1222 2234578999999999999999999999 554
Q ss_pred ChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC
Q 015435 271 TEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIK 350 (407)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 350 (407)
++ +.+.+...... .+.+.+.|.++..++++. ++++..+.++++++.+.+.|++.+. +.+.+
T Consensus 229 -~~----~~~~~~~~~~~--~~~~~~~q~~~~~~l~~~--------~~~~~~~~~~~~r~~l~~~l~~~~g---~~~~~- 289 (351)
T PRK14807 229 -EN----ILKYLNLVKSP--YNINSLSQVIALKVLRTG--------VLKERVNYILNERERLIKELSKIPG---IKVYP- 289 (351)
T ss_pred -HH----HHHHHHHccCC--CCcCHHHHHHHHHHHhHH--------HHHHHHHHHHHHHHHHHHHHHhCCC---cEECc-
Confidence 44 44444444332 356788899998888743 2344555677888889898877532 55544
Q ss_pred CceeEEecCC-CHHHHHHhHhhccEEEcCCC---------eEEecCCCCCChhHHHHHHHHHH
Q 015435 351 QIGMFTFTGL-NSEQVAFMTKEYHIYMTSDG---------RISMAGLSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 351 ~~~~~~~~~~-~~~~~~~~l~~~gi~~~~gg---------Ris~~~~~~e~i~~~~~~l~~~l 403 (407)
.+++|.|+.+ +.+.+.+.|.++||.+.+++ ||+++ +.++.+++++.|++++
T Consensus 290 ~~~~~~~i~~~~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 290 SKTNFILVKFKDADYVYQGLLERGILVRDFSKVEGLEGALRITVS--SCEANDYLINGLKELL 350 (351)
T ss_pred CCccEEEEEcCCHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcC--CHHHHHHHHHHHHHhh
Confidence 4567888876 44556666666899986631 99988 4577888888887753
No 94
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=6.6e-37 Score=290.08 Aligned_cols=324 Identities=16% Similarity=0.172 Sum_probs=246.9
Q ss_pred CCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCC
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLS 108 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g 108 (407)
+..+++||++|.+ +.+ + ++.+.+++.+.+. ....|++. +..++|+++++++ + +++++|++ |+|
T Consensus 30 ~~~~~i~l~~~~~--~~~-~-~~~~~~a~~~~~~----~~~~y~~~-~~~~lr~~ia~~~-~-----~~~~~i~~--t~G 92 (367)
T PRK02731 30 GIADIIKLASNEN--PLG-P-SPKAIEAIRAAAD----ELHRYPDG-SGFELKAALAEKF-G-----VDPERIIL--GNG 92 (367)
T ss_pred CCCceEEecCCCC--CCC-C-CHHHHHHHHHHHH----hhcCCCCC-cHHHHHHHHHHHh-C-----cCHHHEEE--cCC
Confidence 4578999999974 233 3 4445555554443 24567554 4579999999988 4 23589999 999
Q ss_pred cccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCC
Q 015435 109 GTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAH 188 (407)
Q Consensus 109 ~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~ 188 (407)
+++++.++. ...+.+||+|++++|+|..+...++..|.+++.++. .++++|++.+++.+. ++++++++ ++||
T Consensus 93 ~~~~l~~~~--~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~--~~~~~v~l-~~p~ 164 (367)
T PRK02731 93 SDEILELLA--RAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVT--PRTRLVFI-ANPN 164 (367)
T ss_pred HHHHHHHHH--HHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc---cCCCCCHHHHHHHhC--CCCcEEEE-eCCC
Confidence 999998874 334679999999999999998888899999999987 246799999999887 56677777 8999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEe
Q 015435 189 NPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIV 268 (407)
Q Consensus 189 NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v 268 (407)
||||.+++.+++.+|++.|+ +|+++|+||+|.++.+.+.. ..++ .+....+++++++||||.||++|+|+||+ +
T Consensus 165 nptG~~~~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~--~~~~-~~~~~~~~~i~~~S~SK~~g~~G~RiG~l--~ 238 (367)
T PRK02731 165 NPTGTYLPAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKDY--EDGL-ELVAKFPNVVVTRTFSKAYGLAGLRVGYG--I 238 (367)
T ss_pred CCCCcCCCHHHHHHHHHhCC-CCcEEEEECcHHHhccCcCc--ccHH-HHHhhcCCEEEEeeehHhhcCcccceeee--e
Confidence 99999999999999988875 69999999999988875421 2222 22344578999999999999999999999 5
Q ss_pred ecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc
Q 015435 269 CKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHI 348 (407)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 348 (407)
++ ++ +.+.+...... ++.+.++|.++..++++. ++.++.++.++++++.+.+.|++.| +.+.
T Consensus 239 ~~-~~----~~~~l~~~~~~--~~~~~~~~~~a~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~ 300 (367)
T PRK02731 239 AP-PE----IIDALNRVRQP--FNVNSLALAAAVAALDDD-------AFVEKSRALNAEGMAWLTEFLAELG----LEYI 300 (367)
T ss_pred CC-HH----HHHHHHHccCC--CCCCHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHHHHCC----CccC
Confidence 65 44 44444444332 356788899999988764 4466778888899999999999886 5554
Q ss_pred cCCceeEEecCC----CHHHHHHhHhhccEEEcCC------C--eEEecCCCCCChhHHHHHHHHHHH
Q 015435 349 IKQIGMFTFTGL----NSEQVAFMTKEYHIYMTSD------G--RISMAGLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 349 ~~~~~~~~~~~~----~~~~~~~~l~~~gi~~~~g------g--Ris~~~~~~e~i~~~~~~l~~~l~ 404 (407)
+ .+|+|.|+.+ +.+.+.+.|.++||.+.++ + ||+++ +.++++++++.|+++++
T Consensus 301 ~-~~g~~~~i~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 301 P-SVGNFILVDFDDGKDAAEAYQALLKRGVIVRPVAGYGLPNALRITIG--TEEENRRFLAALKEFLA 365 (367)
T ss_pred C-CCceEEEEECCCCCCHHHHHHHHHHCCEEEEeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHHHh
Confidence 4 4567888765 4455555556689999885 2 99987 56889999999998875
No 95
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-36 Score=284.95 Aligned_cols=319 Identities=19% Similarity=0.169 Sum_probs=239.2
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC 106 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t 106 (407)
...+++++||+.|.+ ..+.|..+.+++.+.+. ...+|++..|.+++|+++++++ + +++++|++ |
T Consensus 18 ~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~----~~~~Y~~~~g~~~lr~aia~~~-~-----~~~~~I~i--t 81 (349)
T PRK07908 18 QDAGPGLLDFAVNVR----HDTPPEWLRERLAARLG----DLAAYPSTEDERRARAAVAARH-G-----RTPDEVLL--L 81 (349)
T ss_pred ccCCCCeEEecCCCC----CCCCCHHHHHHHHHHhh----HhhcCCCccchHHHHHHHHHHh-C-----cChhhEEE--C
Confidence 344689999999973 22445555666555553 2456977889999999999998 4 34689999 9
Q ss_pred CCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecC
Q 015435 107 LSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHAC 186 (407)
Q Consensus 107 ~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~ 186 (407)
+|+++++.+++. +.+ +.++++.|+|..+...++..|.+++.++++ + ++++|++.+. ++++++++ ++
T Consensus 82 ~Ga~~al~~~~~----l~~-~~viv~~P~y~~~~~~~~~~G~~i~~v~~~-~-~~~~d~~~l~------~~~~~i~l-~n 147 (349)
T PRK07908 82 AGAAEGFALLAR----LRP-RRAAVVHPSFTEPEAALRAAGIPVHRVVLD-P-PFRLDPAAVP------DDADLVVI-GN 147 (349)
T ss_pred CCHHHHHHHHHh----cCC-CeEEEeCCCChHHHHHHHHcCCEEEeeccC-c-ccCcChhHhc------cCCCEEEE-cC
Confidence 999999998842 456 567788999999999999999999999983 3 3678887542 34667666 99
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeE
Q 015435 187 AHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALS 266 (407)
Q Consensus 187 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 266 (407)
||||||++++.+++.++ |+ ++.++|+||+|.++..+. ..++.. ...+++++++||||.|+++|+|+||+
T Consensus 148 p~NPTG~~~~~~~l~~l---~~-~~~~iIvDe~y~~~~~~~----~~~l~~--~~~~~~i~i~S~SK~~~l~GlRiG~~- 216 (349)
T PRK07908 148 PTNPTSVLHPAEQLLAL---RR-PGRILVVDEAFADAVPGE----PESLAG--DDLPGVLVLRSLTKTWSLAGLRVGYA- 216 (349)
T ss_pred CCCCCCCCcCHHHHHHH---Hh-cCCEEEEECcchhhccCC----cccccc--ccCCCEEEEeecccccCCccceeeee-
Confidence 99999999998766555 65 477888999999886431 122211 12357999999999999999999999
Q ss_pred EeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 015435 267 IVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWS 346 (407)
Q Consensus 267 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 346 (407)
+++ ++ +.+.+...... ++.+.+.+.++..++.+.. .+++++.+++++++++++.+.|++.+ +.
T Consensus 217 -~~~-~~----~~~~~~~~~~~--~~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~~~~~r~~l~~~L~~~~----~~ 279 (349)
T PRK07908 217 -LGA-PD----VLARLTRGRAH--WPVGTLQLEAIAACCAPRA-----VAEAAADAARLAADRAEMVAGLRAVG----AR 279 (349)
T ss_pred -ecC-HH----HHHHHHhcCCC--CCccHHHHHHHHHHhcccc-----hHHHHHHHHHHHHHHHHHHHHHHhCC----cE
Confidence 555 44 44444443332 3455666777666666321 24567788999999999999998875 77
Q ss_pred cccCCceeEEecCCC-HHHHHHhHhhccEEEcCCC----------eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 347 HIIKQIGMFTFTGLN-SEQVAFMTKEYHIYMTSDG----------RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 347 ~~~~~~~~~~~~~~~-~~~~~~~l~~~gi~~~~gg----------Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
+..|.+++|.|+.+. .+.+...|+++||.+.+|. ||+++ +++++++++++|++++..
T Consensus 280 ~~~p~~g~~~~~~~~~~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~--~~~~~~~l~~al~~~~~~ 347 (349)
T PRK07908 280 VVDPAAAPFVLVRVPDAELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR--PRAEVPVLVQALAEILKA 347 (349)
T ss_pred eccCCCceEEEEECCcHHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC--CCccHHHHHHHHHHHHhc
Confidence 777788999999774 4566777788999998751 99996 678999999999988753
No 96
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.5e-37 Score=286.32 Aligned_cols=313 Identities=17% Similarity=0.191 Sum_probs=233.4
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCc
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSG 109 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~ 109 (407)
+.+.|||+.|.+ .. +.++.+++++.+.+. ......| |..|.+++|+++++++ + +++++|++ |+|+
T Consensus 17 ~~~~i~l~~~~~---~~-~~~~~~~~~~~~~~~--~~~~~~Y-~~~g~~~lr~~ia~~~-~-----~~~~~I~~--t~G~ 81 (337)
T PRK03967 17 GNYRIWLDKNEN---PF-DLPEELKEEIFEELK--RVPFNRY-PHITSDPLREAIAEFY-G-----LDAENIAV--GNGS 81 (337)
T ss_pred CCceEEecCCCC---CC-CCCHHHHHHHHHHhh--cCccccC-CCCCHHHHHHHHHHHh-C-----cCcceEEE--cCCH
Confidence 357899999974 22 455667777766664 2235568 4579999999999999 4 45689999 9999
Q ss_pred ccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCC
Q 015435 110 TGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHN 189 (407)
Q Consensus 110 t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~N 189 (407)
++++..+. ..+ +||+|+++.|+|..+...++..|.+++.++++ .++++|++.+++.+ ++++++++ ++|||
T Consensus 82 ~~~l~~~~---~~~-~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~---~~~~~v~~-~~P~N 151 (337)
T PRK03967 82 DELISYLV---KLF-EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLK--EDFTIDGERIAEKA---KNASAVFI-CSPNN 151 (337)
T ss_pred HHHHHHHH---HHh-CCCeEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCcCHHHHHHhc---cCCCEEEE-eCCCC
Confidence 99998773 223 79999999999999988889999999999983 34789999998764 35667776 89999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEee
Q 015435 190 PTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVC 269 (407)
Q Consensus 190 PtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~ 269 (407)
|||.+++.+++.++ + ++++++|+||+|.+|... ... ......+++++++||||.|+++|+|+||+ ++
T Consensus 152 PtG~~~~~~~l~~i---~-~~~~~ii~De~y~~~~~~----~~~---~~~~~~~~vi~l~S~SK~~~l~GlRiG~i--v~ 218 (337)
T PRK03967 152 PTGNLQPEEEILKV---L-ETGKPVVLDEAYAEFSGK----SLI---GLIDEYPNLILLRTFSKAFGLAGIRAGYA--IA 218 (337)
T ss_pred CCCCCCCHHHHHHH---H-hcCCEEEEECchhhhccc----chH---HHHhhCCCEEEEecchHhhcchhhhheee--ec
Confidence 99999998877776 4 479999999999988632 111 12334568999999999999999999999 56
Q ss_pred cChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc
Q 015435 270 KTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHII 349 (407)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 349 (407)
+ ++ +.+.+...... .+.+.++|.++..++++. ++..+.++.+.++++.+.+.|.+.. .
T Consensus 219 ~-~~----~i~~~~~~~~~--~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~r~~l~~~L~~~~--------~ 276 (337)
T PRK03967 219 N-EE----IIDALYRIKPP--FSLNILTMKIVRLALDHY-------DLIEERIDYIIKERERVRRELGEYA--------Y 276 (337)
T ss_pred C-HH----HHHHHHhhcCC--CCCCHHHHHHHHHHHhCH-------HHHHHHHHHHHHHHHHHHHHhccCc--------C
Confidence 5 44 44445444433 367889999999998764 2344444556667777888775432 3
Q ss_pred CCceeEEecCCCHHHHHHhHhhccEEEcCCC-------eEEecCCCCCChhHHHHHHHHHHHhhC
Q 015435 350 KQIGMFTFTGLNSEQVAFMTKEYHIYMTSDG-------RISMAGLSSKTVPHLTDAIHAAVTRMG 407 (407)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~l~~~gi~~~~gg-------Ris~~~~~~e~i~~~~~~l~~~l~~~~ 407 (407)
+.+++|.|+.++ .. +.|.++||.+.+++ ||+++ +.++.++++++|..+.+..|
T Consensus 277 ~~~~~~~~~~~~--~~-~~l~~~gi~v~~~~~~~~~~~Ri~~~--~~~~~~~l~~~l~~~~~~~~ 336 (337)
T PRK03967 277 PSDANFLLLKLD--AY-DYLLENGIVVRKLSGRLEGHIRVTVG--KREENDEFIKALKEIKEGYG 336 (337)
T ss_pred CCCCcEEEEhHH--HH-HHHHHCCEEEEeCCCCCCCeEEEecC--CHHHHHHHHHHHHHHHHhcC
Confidence 567889998763 33 44445799997642 99888 45778899999988876554
No 97
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=5.6e-37 Score=285.95 Aligned_cols=305 Identities=17% Similarity=0.173 Sum_probs=227.9
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcc
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGT 110 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t 110 (407)
.++|||+.++. +.| |.+..... .. ...| |... .+||+++++++ +.. ++++|++ |+|++
T Consensus 24 ~~~i~ls~Nen--p~~-~~~~~~~~---~~-------~~~Y-p~~~-~~L~~~ia~~~-~~~----~~~~I~i--~~Gs~ 81 (339)
T PRK06959 24 DAWLDLSTGIN--PHG-YPVPPVPA---DA-------WRRL-PEDD-DGLAACAARYY-GAP----DAAHVLP--VAGSQ 81 (339)
T ss_pred hhhceeccCCC--CCC-CCCCCCCH---HH-------HHhC-CCch-HHHHHHHHHHh-CCC----CcccEEE--CcCHH
Confidence 57899998873 333 22122211 11 2337 4444 89999999998 532 2479999 99999
Q ss_pred cHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCC
Q 015435 111 GSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNP 190 (407)
Q Consensus 111 ~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NP 190 (407)
+++.++. ..+.+|| |++++|+|..|...++..|.+++.++.+ + +.+. ...+++++ ++||||
T Consensus 82 e~i~~l~---~~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~-~-------~~~~------~~~~~v~l-~nPnNP 142 (339)
T PRK06959 82 AAIRALP---ALLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEA-A-------DTLP------AALTHLIV-VNPNNP 142 (339)
T ss_pred HHHHHHH---HhcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeeccc-c-------hhcc------ccCCEEEE-eCCCCC
Confidence 9998663 3456776 8899999999999999999999988762 1 2221 12345565 999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeec
Q 015435 191 TGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCK 270 (407)
Q Consensus 191 tG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~ 270 (407)
||++++.+++++|++.|.+++.++|+||+|.+|... .++..+. ..+++++++||||.||++|+|+||+ +++
T Consensus 143 TG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~------~s~~~~~-~~~~vi~l~SfSK~~gl~GlRiGy~--v~~ 213 (339)
T PRK06959 143 TAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA------ASLAAHT-DRPGLVVLRSVGKFFGLAGVRAGFV--LAA 213 (339)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc------ccchhcc-CCCCEEEEecChhhcCCcchheEEE--ecC
Confidence 999999999999999999999999999999988642 1222222 2467999999999999999999999 565
Q ss_pred ChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC
Q 015435 271 TEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIK 350 (407)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 350 (407)
+ .+.+.+...... ++.+.++|.++..+|++. .+.++.+++++++++.+.+.|++.| +.+.
T Consensus 214 -~----~li~~l~~~~~~--~~vs~~~q~a~~~~L~~~-------~~~~~~~~~~~~~r~~l~~~L~~~g----~~~~-- 273 (339)
T PRK06959 214 -P----ALLAALRDALGA--WTVSGPARHAVRAAFADA-------AWQAAMRERLAADGARLAALLRAHG----FAVH-- 273 (339)
T ss_pred -H----HHHHHHHHhcCC--CCCcHHHHHHHHHHhCcH-------HHHHHHHHHHHHHHHHHHHHHHHCC----CCcc--
Confidence 4 455555555433 356788999999999875 3456778999999999999999987 4443
Q ss_pred CceeEEecCC-CHHHHHHhHhhccEEEcCCC-----eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 351 QIGMFTFTGL-NSEQVAFMTKEYHIYMTSDG-----RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 351 ~~~~~~~~~~-~~~~~~~~l~~~gi~~~~gg-----Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
.+++|.|+++ +...+...|.++||.+...+ ||+++. +++++++++++|+++++.+
T Consensus 274 ~~~~f~~~~~~~~~~l~~~l~~~GI~vr~~~~~~~lRisi~~-~~~e~~~l~~al~~~~~~~ 334 (339)
T PRK06959 274 ATPLFSWTDDPRAAALHAALARRGIWTRYFAPPPSVRFGLPA-DEAEWQRLEDALAECVPTL 334 (339)
T ss_pred CcceEEEEeCCCHHHHHHHHHhCCeEEEECCCCCeEEEECCC-CHHHHHHHHHHHHHHHHHH
Confidence 2568888876 44455666667899998653 999864 6789999999999887654
No 98
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1e-36 Score=284.07 Aligned_cols=304 Identities=14% Similarity=0.142 Sum_probs=222.1
Q ss_pred CeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCccc
Q 015435 32 VKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTG 111 (407)
Q Consensus 32 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~ 111 (407)
++|||+.++- |.+ .. .....| |.....+||+++++++ +. ++++|++ |+|+++
T Consensus 17 ~~i~l~~Nen------p~~---------~~----~~~~~Y-p~~~~~~lr~~ia~~~-~~-----~~~~I~i--t~Gs~~ 68 (332)
T PRK06425 17 RIIDFSANIN------DFM---------DI----GDISIY-PEISYTDIEDQIKIYT-QG-----LKIKVLI--GPGLTH 68 (332)
T ss_pred CEEEeccccC------CCc---------Ch----hhcccC-cCcCHHHHHHHHHHHh-CC-----CcceEEE--CCCHHH
Confidence 7899997762 432 01 123447 6566899999999998 53 3578999 999999
Q ss_pred HHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCC
Q 015435 112 SLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPT 191 (407)
Q Consensus 112 a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPt 191 (407)
++.++.. .+.+| .|++++|+|..|...++..|++++.+|++ + .+.|.+.+++ .+++++++ ++|||||
T Consensus 69 ~l~~~~~---~~~~~-~vv~~~P~y~~y~~~~~~~G~~v~~vp~~-~--~~~~~~~l~~-----~~~k~v~l-~nP~NPT 135 (332)
T PRK06425 69 FIYRLLS---YINVG-NIIIVEPNFNEYKGYAFTHGIRISALPFN-L--INNNPEILNN-----YNFDLIFI-VSPDNPL 135 (332)
T ss_pred HHHHHHH---HhCCC-cEEEeCCChHHHHHHHHHcCCeEEEEeCC-c--ccCcHHHHhh-----cCCCEEEE-eCCCCCc
Confidence 9999852 35565 57777999999999999999999999983 2 3455544432 35677777 7999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecC
Q 015435 192 GVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKT 271 (407)
Q Consensus 192 G~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~ 271 (407)
|.+++.+++++|+++|+++|++||+||+|.+|.+++. .+...+....+++++++||||.|+++|+|+||+ +++
T Consensus 136 G~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~----~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~--v~~- 208 (332)
T PRK06425 136 GNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRA----EEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYI--ATD- 208 (332)
T ss_pred CCccCHHHHHHHHHHHHHcCCEEEEecchhccccccc----hhHHHHhccCCCEEEEeecHHhcCCchhhheee--ecC-
Confidence 9999999999999999999999999999999987531 223333344578999999999999999999999 566
Q ss_pred hhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCC
Q 015435 272 EDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQ 351 (407)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 351 (407)
+.+.+.+......+ +.+..++ .++.... +..+.++.++.++++++.+.+.|++.+ +.+..+.
T Consensus 209 ----~~li~~l~~~~~~~--~~~~~~~----~~l~~~~----~~~~~~~~~~~~~~~r~~l~~~L~~~g----~~~~~~~ 270 (332)
T PRK06425 209 ----DYNMKISRKITEPW--SVCDPAI----DFIRSID----LDYVAKHSLDIMENERSYLINNLEAMG----FRAAGDP 270 (332)
T ss_pred ----HHHHHHHHHcCCCC--ccCHHHH----HHHHHhh----hHHHHHHHHHHHHHHHHHHHHHHHHCC----CEECCCC
Confidence 34555454433222 2233222 2232221 124456778899999999999999887 6655444
Q ss_pred ceeEEecCC-CHHHHHHhHhhccEEEcCCC----------eEEecCCCCCChhHHHHHHHHHH
Q 015435 352 IGMFTFTGL-NSEQVAFMTKEYHIYMTSDG----------RISMAGLSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 352 ~~~~~~~~~-~~~~~~~~l~~~gi~~~~gg----------Ris~~~~~~e~i~~~~~~l~~~l 403 (407)
+|.|.|+.+ +.+.+.+.|.++||.+.|+. ||+++ +++++++++++|++++
T Consensus 271 ~g~f~~~~~~~~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 271 SANFITFMIPDAHDFYSYLLKNGILVRLLDDYECLGEQYIRIAIR--RRSFNIKLVNALRNFL 331 (332)
T ss_pred CceEEEEEcCCHHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC--CHHHHHHHHHHHHHHh
Confidence 566777766 44444444445799998751 99998 5688999999998765
No 99
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-37 Score=289.57 Aligned_cols=290 Identities=20% Similarity=0.236 Sum_probs=222.8
Q ss_pred cccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCC-CeEEecCCCCCChHHHHhhc
Q 015435 68 VKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQ-LTIYIPQPTWGNHPKVFTLA 146 (407)
Q Consensus 68 ~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~g-d~Vi~~~p~y~~~~~~~~~~ 146 (407)
...| |.....++++.+++++ + +++++|++ |+|+++++.+++ ...+.+| |+|++++|+|..|...++..
T Consensus 51 ~~~Y-p~~~~~~l~~~~a~~~-g-----~~~~~I~~--~~Gs~e~i~~~~--~~~~~~g~~~vli~~P~y~~y~~~~~~~ 119 (351)
T PRK01688 51 LNRY-PECQPKAVIENYAAYA-G-----VKPEQVLV--SRGADEGIELLI--RAFCEPGKDAILYCPPTYGMYSVSAETI 119 (351)
T ss_pred cccC-CCCChHHHHHHHHHHh-C-----CCHHHEEE--cCCHHHHHHHHH--HHhcCCCCCEEEEcCCCHHHHHHHHHHc
Confidence 4446 5555689999999987 5 35689999 999999999995 3346676 89999999999999999999
Q ss_pred CceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCC
Q 015435 147 GLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASG 226 (407)
Q Consensus 147 G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~ 226 (407)
|++++.+|++ .++.+|++++++.+. +++++++ +|||||||++++.+++++|++.|++ +.++|+||+|.+|...
T Consensus 120 G~~~~~v~~~--~~~~~d~~~l~~~~~---~~~lv~l-~nPnNPTG~~~~~~~l~~l~~~~~~-~~~vivDEay~~f~~~ 192 (351)
T PRK01688 120 GVEIRTVPTL--DNWQLDLPAIADNLD---GVKVVYV-CSPNNPTGNLINPQDLRTLLELTRG-KAIVVADEAYIEFCPQ 192 (351)
T ss_pred CCEEEEeecC--CCCCCCHHHHHHhcc---CCcEEEE-eCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECchhhcCCC
Confidence 9999999983 347899999998763 5677777 8999999999999999999999986 6789999999998742
Q ss_pred CCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhc
Q 015435 227 SLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILK 306 (407)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 306 (407)
. +...+....+++++++||||.||++|+|+||+ +++ ++ +.+.+...... ++.+.+.+.++..+|.
T Consensus 193 ~------s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~--i~~-~~----~i~~l~~~~~~--~~v~~~~~~~a~~~L~ 257 (351)
T PRK01688 193 A------SLAGWLAEYPHLVILRTLSKAFALAGLRCGFT--LAN-EE----VINLLLKVIAP--YPLSTPVADIAAQALS 257 (351)
T ss_pred C------ChHHHHhhCCCEEEEecchHhhcCHHHHHhHH--hCC-HH----HHHHHHhccCC--CCCCHHHHHHHHHHHh
Confidence 1 12223344578999999999999999999999 555 44 44444444433 3567777888888887
Q ss_pred ChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCC-CHHHHHHhHhhccEEEcCC----C-
Q 015435 307 DSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL-NSEQVAFMTKEYHIYMTSD----G- 380 (407)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~gi~~~~g----g- 380 (407)
+.. .+++++.++.+.++++++.+.|++++. +....|.++.|.|+.+ +.+.+.+.|.++||.+.++ |
T Consensus 258 ~~~-----~~~~~~~~~~~~~~r~~l~~~L~~~~~---~~~~~ps~~nfi~~~~~~~~~l~~~L~~~gi~vr~~~~~~~~ 329 (351)
T PRK01688 258 PQG-----IAAMRERVAEINANRQWLIAALKEIPC---VEQVFDSETNYILARFTASSAVFKSLWDQGIILRDQNKQPGL 329 (351)
T ss_pred cch-----HHHHHHHHHHHHHHHHHHHHHHHhCCC---CCeECCCCCcEEEEEcCCHHHHHHHHHHCCeEEEECCCcCCC
Confidence 542 144667778888899999999988742 4434455677888866 3455555555689999753 2
Q ss_pred ----eEEecCCCCCChhHHHHHHH
Q 015435 381 ----RISMAGLSSKTVPHLTDAIH 400 (407)
Q Consensus 381 ----Ris~~~~~~e~i~~~~~~l~ 400 (407)
||+++ +++++++++++|+
T Consensus 330 ~~~iRis~~--~~~e~~~l~~al~ 351 (351)
T PRK01688 330 SNCLRITIG--TREECQRVIDALR 351 (351)
T ss_pred CCeEEEeCC--CHHHHHHHHHhhC
Confidence 99988 5688888888763
No 100
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=1.4e-36 Score=282.87 Aligned_cols=303 Identities=15% Similarity=0.145 Sum_probs=224.9
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcc
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGT 110 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t 110 (407)
.++|||+.++. +.+ +.+..... .. ...|+. +..+||+++++++ +. ++|++ |+|++
T Consensus 20 ~~~i~l~~ne~--p~~-~~~~~~~~---~~-------~~~yp~--~~~~Lr~~ia~~~-~~-------~~I~i--t~Gs~ 74 (330)
T PRK05664 20 ADWLDLSTGIA--PWP-WPVPAIPA---DA-------WARLPE--TDDGLEAAARAYY-GA-------PQLLP--VAGSQ 74 (330)
T ss_pred HHheeecCCcC--CCC-CCCcccCH---HH-------HHhCCC--ChHHHHHHHHHHh-CC-------CCEEE--CcCHH
Confidence 47899999962 233 22222211 11 122632 3389999999998 43 79999 99999
Q ss_pred cHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCC
Q 015435 111 GSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNP 190 (407)
Q Consensus 111 ~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NP 190 (407)
+++.++. . +.+||+|++++|+|+.+...++..|++++.+|+. ++++.+. +++++++ ++||||
T Consensus 75 ~al~~~~--~--~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~----------~~~~~~~---~~~~v~l-~nP~NP 136 (330)
T PRK05664 75 AAIQALP--R--LRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA----------EVEAALD---SLDVLVV-VNPNNP 136 (330)
T ss_pred HHHHHHH--H--ccCCCEEEEcCCChHHHHHHHHHcCCeEEEechh----------hHhhhhc---CCCEEEE-eCCcCC
Confidence 9998873 2 5699999999999999999999999999998761 3444443 4556666 899999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeec
Q 015435 191 TGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCK 270 (407)
Q Consensus 191 tG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~ 270 (407)
||.+++.+++++|+++|+++|++||+||+|.++... .++..+. ..+++++++||||.||++|+|+||+ +++
T Consensus 137 TG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~------~s~~~~~-~~~~vi~~~SfSK~~gl~GlRiG~~--v~~ 207 (330)
T PRK05664 137 TGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQ------HSLAACA-HRPGLIVLRSFGKFFGLAGARLGFV--LAE 207 (330)
T ss_pred CCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCc------ccccccc-cCCCEEEEeeccccccCCCcceEEE--EeC
Confidence 999999999999999999999999999999876521 1222222 3468999999999999999999999 565
Q ss_pred ChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC
Q 015435 271 TEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIK 350 (407)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 350 (407)
++ +.+.+...... .+.+.+.|.++..+|.+. .+.++.+++++++++.+.+.|++.+ +... +
T Consensus 208 -~~----l~~~~~~~~~~--~~~~~~~~~~~~~~L~~~-------~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~-~ 268 (330)
T PRK05664 208 -PA----LLRALAELLGP--WTVSGPTRWLAQAALADT-------PWQRRQRERLLAASQRLAALLRRHG----LTPA-G 268 (330)
T ss_pred -HH----HHHHHHHhcCC--CCCCHHHHHHHHHHHhCh-------HHHHHHHHHHHHHHHHHHHHHHHCC----Cccc-C
Confidence 44 44545444332 356778888888888765 2345678889999999999999876 4321 2
Q ss_pred CceeEEecCC-CHHHHHHhHhhccEEEcCCC-----eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 351 QIGMFTFTGL-NSEQVAFMTKEYHIYMTSDG-----RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 351 ~~~~~~~~~~-~~~~~~~~l~~~gi~~~~gg-----Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
..++|.|+.. +.+.+.+.|.++||.+...+ ||+++. ++++++++.+.|+++.++
T Consensus 269 ~~~~f~~~~~~~~~~~~~~l~~~gi~v~~f~~~~~iRis~~~-~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 269 GCALFQWVRTEDAAALHEFLARRGILTRLFEQPASLRFGLPA-DEADWARLDQALLAYRKE 328 (330)
T ss_pred CcceEEEEecCCHHHHHHHHHHCCeEEEECCCCCeEEEECCC-CHHHHHHHHHHHHHHHhh
Confidence 2237888866 45556666777899997643 999985 667889999998887654
No 101
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=7.1e-37 Score=288.10 Aligned_cols=324 Identities=17% Similarity=0.217 Sum_probs=241.1
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcc
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGT 110 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t 110 (407)
.++|+|+.|.+ .. +.++.+.+++.+.+. ....| +..|.+++|+++++++ + +++++|++ |+|++
T Consensus 22 ~~~i~l~~~~~---~~-~~~~~~~~a~~~~~~----~~~~y-~~~g~~~lr~~ia~~~-~-----~~~~~I~~--~~G~~ 84 (352)
T PRK03321 22 PGAIKLSSNET---PF-GPLPSVRAAIARAAA----GVNRY-PDMGAVELRAALAEHL-G-----VPPEHVAV--GCGSV 84 (352)
T ss_pred ccceeccCCCC---CC-CCCHHHHHHHHHHHH----hcCcC-CCCcHHHHHHHHHHHh-C-----cCHHHEEE--CCCHH
Confidence 47899999975 21 234445555444432 23457 5689999999999998 4 34579999 99999
Q ss_pred cHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCC
Q 015435 111 GSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNP 190 (407)
Q Consensus 111 ~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NP 190 (407)
+++..+. ...+.+||+|+++.|+|..+...++..|.+++.++++ + .+++|++.+++.+. ++++++++ ++||||
T Consensus 85 ~~l~~~~--~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~-~-~~~~~~~~l~~~~~--~~~~~v~l-~~p~NP 157 (352)
T PRK03321 85 ALCQQLV--QATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLT-P-DHTHDLDAMAAAIT--DRTRLIFV-CNPNNP 157 (352)
T ss_pred HHHHHHH--HHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCC-C-CCCCCHHHHHHhhc--cCCCEEEE-eCCCCC
Confidence 9998884 3346799999999999999888889999999999983 2 37899999999886 56777777 799999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeec
Q 015435 191 TGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCK 270 (407)
Q Consensus 191 tG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~ 270 (407)
||.+++.+++.++++.| ++++++|+||+|.++.+++.. ..++.. ....+++++++||||.||++|+|+||+ +++
T Consensus 158 tG~~~~~~~l~~l~~~~-~~~~~ii~De~y~~~~~~~~~--~~~~~~-~~~~~~vi~~~S~SK~~g~~GlRiG~~--v~~ 231 (352)
T PRK03321 158 TGTVVTPAELARFLDAV-PADVLVVLDEAYVEYVRDDDV--PDGLEL-VRDHPNVVVLRTFSKAYGLAGLRVGYA--VGH 231 (352)
T ss_pred cCCCcCHHHHHHHHHhC-CCCeEEEEechHHHhccCcCC--CcHHHH-HhhCCCEEEEecchHHhhhHHHhhhhh--cCC
Confidence 99999999888887765 479999999999999886421 122222 234578999999999999999999999 565
Q ss_pred ChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC
Q 015435 271 TEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIK 350 (407)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 350 (407)
++ +.+.+.... ...+.+.++|.++..++...+ . ..+..+++.++++.+.+.|++.+ +.+..
T Consensus 232 -~~----~~~~~~~~~--~~~~~s~~~q~~a~~~l~~~~------~-~~~~~~~~~~~r~~~~~~L~~~~----~~~~~- 292 (352)
T PRK03321 232 -PE----VIAALRKVA--VPFSVNSLAQAAAIASLAAED------E-LLERVDAVVAERDRVRAALRAAG----WTVPP- 292 (352)
T ss_pred -HH----HHHHHHHhc--CCCCCCHHHHHHHHHHhcCHH------H-HHHHHHHHHHHHHHHHHHHHHCC----CccCC-
Confidence 44 444444332 234778889988888886432 2 22333444556677889998876 55444
Q ss_pred CceeEEecCC--CHHHHHHhHhhccEEEcCCC----eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 351 QIGMFTFTGL--NSEQVAFMTKEYHIYMTSDG----RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 351 ~~~~~~~~~~--~~~~~~~~l~~~gi~~~~gg----Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
.+|+|.|+.+ +.+.+.+.|+++||.+.+.+ ||+++ +.+++++++++|++++..
T Consensus 293 ~~g~~i~i~l~~~~~~~~~~l~~~gI~v~~~~~~~iRi~~~--~~~~~~~~~~al~~~~~~ 351 (352)
T PRK03321 293 SQANFVWLPLGERTADFAAAAAEAGVVVRPFAGEGVRVTIG--APEENDAFLRAARAWRAG 351 (352)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHCCEEEEccCCCcEEEeeC--CHHHHHHHHHHHHHHhcc
Confidence 4567888866 34445555677999999854 88886 678899999999988753
No 102
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-36 Score=286.79 Aligned_cols=297 Identities=16% Similarity=0.189 Sum_probs=228.1
Q ss_pred cccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCC-CeEEecCCCCCChHHHHhhc
Q 015435 68 VKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQ-LTIYIPQPTWGNHPKVFTLA 146 (407)
Q Consensus 68 ~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~g-d~Vi~~~p~y~~~~~~~~~~ 146 (407)
...|+. .+..++|+++++++ + +++++|++ |+|+++++.+++ ...+.+| |.|++++|+|..+...++..
T Consensus 53 ~~~Y~~-~~~~~lr~~ia~~~-~-----~~~~~I~~--t~G~~~~l~~~~--~~~~~~g~~~vlv~~p~y~~~~~~~~~~ 121 (364)
T PRK04781 53 TRRYPD-PQPPGLRSALAALY-G-----CAPEQLLI--GRGSDEAIDLLV--RALCVPGRDAVLVTPPVFGMYAVCARLQ 121 (364)
T ss_pred hccCCC-CCHHHHHHHHHHHh-C-----cChHHEEE--eCCHHHHHHHHH--HHhcCCCCCeEEEcCCChHHHHHHHHHc
Confidence 455754 45789999999988 4 34689999 999999999985 3336788 79999999999998888999
Q ss_pred CceeeEEEeecC-CCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccC
Q 015435 147 GLSVKTYRYYDP-ATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFAS 225 (407)
Q Consensus 147 G~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~ 225 (407)
|.+++.+|+.++ .++.+|++++.+.+.. ++++++++ ++||||||.+++.+++++|++.|+ +++++|+||+|.+|.+
T Consensus 122 g~~~~~v~~~~~~~~~~~d~~~l~~~~~~-~~~~lv~l-~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~ 198 (364)
T PRK04781 122 NAPLVEVPLVDGADGFHADVPAIVAAALA-SNAKLVFL-CSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSD 198 (364)
T ss_pred CCEEEEEecCCCccCCCcCHHHHHHHHhc-cCCeEEEE-cCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcC
Confidence 999999998422 3456788888765532 45677777 799999999999999999999885 4789999999999985
Q ss_pred CCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHh
Q 015435 226 GSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305 (407)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (407)
.. +...+....+++++++||||.||++|+|+||+ +++ .++...+...... ++.+.++|.++..++
T Consensus 199 ~~------~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~--v~~-----~~l~~~l~~~~~~--~~~~~~~~~~a~~~l 263 (364)
T PRK04781 199 VP------SAVGLLARYDNLAVLRTLSKAHALAAARIGSL--IAN-----AELIAVLRRCQAP--YPVPTPCAALAEQAL 263 (364)
T ss_pred Cc------chHHHHhhCCCEEEEecChhhcccccceeeee--eCC-----HHHHHHHHhccCC--CCCCHHHHHHHHHHH
Confidence 31 11122344678999999999999999999999 565 4455555555433 367788888888888
Q ss_pred cChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCC-CHHHHHHhHhhccEEEcCCC----
Q 015435 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL-NSEQVAFMTKEYHIYMTSDG---- 380 (407)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~gi~~~~gg---- 380 (407)
++.. + ....+.+++++++++.+.+.|++++. +....|.+|+|.|+.+ +.+.+.+.+.++||.+.++.
T Consensus 264 ~~~~----~-~~~~~~~~~~~~~r~~l~~~L~~~~~---~~~~~p~~g~f~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~ 335 (364)
T PRK04781 264 SAPA----L-AVTARRVAEVRAERERLHAALAQLPG---VRRVYPSQGNFLLVRFDDAEAAFQALLAAGVVVRDQRAAPR 335 (364)
T ss_pred hccc----H-HHHHHHHHHHHHHHHHHHHHHHhCCC---CCeECCCCCcEEEEEcCCHHHHHHHHHHCCeEEeeCCCCCC
Confidence 7652 1 23445556788999999999988742 4434566788999877 45556666777999998851
Q ss_pred -----eEEecCCCCCChhHHHHHHHHHH
Q 015435 381 -----RISMAGLSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 381 -----Ris~~~~~~e~i~~~~~~l~~~l 403 (407)
||+++ +++++++++++|+++.
T Consensus 336 ~~~~~Ris~~--~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 336 LSDALRITLG--TPEQNDRVLAALQRTQ 361 (364)
T ss_pred CCCeEEEeCC--CHHHHHHHHHHHHHHH
Confidence 99988 5688899999988754
No 103
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=5.3e-36 Score=281.67 Aligned_cols=317 Identities=15% Similarity=0.164 Sum_probs=240.9
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcc
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGT 110 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t 110 (407)
.++|||++|.+ +.+.|+.+++++.+... ..+.|++..+ +++|+++++++ + +++++|++ |+|++
T Consensus 19 ~~~i~l~~~~~----~~~~~~~~~~a~~~~~~----~~~~y~~~~~-~~lr~~ia~~~-~-----~~~~~i~~--~~G~~ 81 (346)
T TIGR01141 19 KEVIKLNSNEN----PFGPPPKAKEALRAEAD----KLHRYPDPDP-AELKQALADYY-G-----VDPEQILL--GNGSD 81 (346)
T ss_pred CceEEccCCCC----CCCCCHHHHHHHHHhHH----HhhcCCCCCH-HHHHHHHHHHh-C-----cChHHEEE--cCCHH
Confidence 58999999984 33556667766666543 2456866555 89999999998 4 33589999 99999
Q ss_pred cHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCC
Q 015435 111 GSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNP 190 (407)
Q Consensus 111 ~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NP 190 (407)
+++..++ ...+.+||+|++++|+|+.+...++..|.+++.+++. + ++.+|++++++.+. ++++++++ ++|+||
T Consensus 82 ~~l~~~~--~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~-~~~~d~~~l~~~~~--~~~~~v~l-~~p~Np 154 (346)
T TIGR01141 82 EIIELLI--RAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLD-E-DGQLDLEDILVAID--DKPKLVFL-CSPNNP 154 (346)
T ss_pred HHHHHHH--HHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccC-C-CCCCCHHHHHHhcC--CCCCEEEE-eCCCCC
Confidence 9998874 3446799999999999999988889999999999983 3 36689999999875 56777777 899999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeec
Q 015435 191 TGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCK 270 (407)
Q Consensus 191 tG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~ 270 (407)
||.+++.+++.++++.|+ +|+++|+|++|.++...+ .... .....+++++++|+||.+|++|+|+||+ +++
T Consensus 155 tG~~~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~---~~~~---~~~~~~~~i~~~S~sK~~g~~G~r~G~~--~~~ 225 (346)
T TIGR01141 155 TGNLLSRSDIEAVLERTP-EDALVVVDEAYGEFSGEP---STLP---LLAEYPNLIVLRTLSKAFGLAGLRIGYA--IAN 225 (346)
T ss_pred CCCCCCHHHHHHHHHhCC-CCcEEEEECchhhhcCCc---cHHH---HHhhCCCEEEEehhhHhhhchhhhceee--ecC
Confidence 999999999999988887 799999999999776532 1111 1223457899999999999999999999 454
Q ss_pred ChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC
Q 015435 271 TEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIK 350 (407)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 350 (407)
++ +.+.+..... .++.+.++|.++..++++. .+.++.+++++++++.+.+.|++.+. +.+.+
T Consensus 226 -~~----~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~~g---~~~~~- 287 (346)
T TIGR01141 226 -AE----IIDALNKVRA--PFNLSRLAQAAAIAALRDD-------DFIEKTVEEINAERERLYDGLKKLPG---LEVYP- 287 (346)
T ss_pred -HH----HHHHHHhccC--CCCCCHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHHHhcCC---CEECC-
Confidence 44 4444443332 2366788899888888765 23667788899999999999988731 55443
Q ss_pred CceeEEecCC--CHHHHHHhHhhccEEEcCC-------C--eEEecCCCCCChhHHHHHHH
Q 015435 351 QIGMFTFTGL--NSEQVAFMTKEYHIYMTSD-------G--RISMAGLSSKTVPHLTDAIH 400 (407)
Q Consensus 351 ~~~~~~~~~~--~~~~~~~~l~~~gi~~~~g-------g--Ris~~~~~~e~i~~~~~~l~ 400 (407)
.+++|.|+.+ +.+.+.+.|.++||.+.++ + |++++ ++++++++++.|+
T Consensus 288 ~~g~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~--~~~~i~~~~~~l~ 346 (346)
T TIGR01141 288 SDANFVLIRFPRDADALFEALLEKGIIVRDLNSYPGLPNCLRITVG--TREENDRFLAALR 346 (346)
T ss_pred CcCCEEEEecCCCHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC--CHHHHHHHHHHhC
Confidence 4567777765 3455555556689999875 2 89977 6788888887763
No 104
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3e-36 Score=283.59 Aligned_cols=311 Identities=17% Similarity=0.167 Sum_probs=232.5
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcc
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGT 110 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t 110 (407)
...++|+.+.. +. +.+ +.+ .. .....|++ .+.++||+++++++ + +++++|++ |+|++
T Consensus 31 ~~~~~l~~ne~--~~--~~~-~~~-----~~----~~~~~Yp~-~~~~~Lr~aia~~~-~-----~~~~~I~i--t~Gs~ 87 (354)
T PRK04635 31 RGDIWINANES--PF--NNE-YKL-----DL----ARLNRYPE-CQPPELINAYSAYA-G-----VAPEQILT--SRGAD 87 (354)
T ss_pred CCcEEeeCCCC--CC--CCC-hhh-----hh----HHhccCCC-CCHHHHHHHHHHHh-C-----cCHHHEEE--eCCHH
Confidence 56799998873 12 222 211 11 12455754 46899999999987 4 45689999 99999
Q ss_pred cHHHHHHHHHHhhcCC-CeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCC
Q 015435 111 GSLRVGAEFLARHYHQ-LTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHN 189 (407)
Q Consensus 111 ~a~~~~~~~~~~~~~g-d~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~N 189 (407)
+++.+++.. .+.+| |+|++++|+|..|...++..|++++.+|+. .++.+|++.++. + ++++++++ ++|||
T Consensus 88 ~~i~~~~~~--~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~--~~~~~~~~~l~~-~---~~~~li~i-~nP~N 158 (354)
T PRK04635 88 EAIELLIRA--FCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLT--ADYQLPLDYIEQ-L---DGAKLVFI-CNPNN 158 (354)
T ss_pred HHHHHHHHH--hcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecC--CCCCCCHHHHHh-c---cCCCEEEE-eCCCC
Confidence 999999533 36788 899999999999999999999999999983 346788888863 2 46778777 89999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEee
Q 015435 190 PTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVC 269 (407)
Q Consensus 190 PtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~ 269 (407)
|||++++.+++++|++.|+ +++||+||+|.+|.... +...+....+++++++||||.||++|+|+||+ ++
T Consensus 159 PTG~~~~~~~l~~l~~~~~--~~~vivDeay~~~~~~~------s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~--i~ 228 (354)
T PRK04635 159 PTGTVIDRADIEQLIEMTP--DAIVVVDEAYIEFCPEY------SVADLLASYPNLVVLRTLSKAFALAGARCGFT--LA 228 (354)
T ss_pred CCCccCCHHHHHHHHHhCC--CcEEEEeCchHhhccCc------chHHHHhhCCCEEEEechHHHhhhhHHHHhhh--hC
Confidence 9999999999999988876 49999999999887421 22223344578999999999999999999999 56
Q ss_pred cChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc
Q 015435 270 KTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHII 349 (407)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 349 (407)
+ ++ +.+.+..... ..+.+.+.+.++..++.+... +.+++.++.++++++.+.+.|++.+. +.+.+
T Consensus 229 ~-~~----~~~~l~~~~~--~~~~~~~~~~~a~~~l~~~~~-----~~~~~~~~~~~~~r~~l~~~L~~~~~---~~~~~ 293 (354)
T PRK04635 229 N-EE----LIEILMRVIA--PYPVPLPVSEIATQALSEAGL-----ARMKFQVLDLNAQGARLQAALSMYGG---AKVLE 293 (354)
T ss_pred C-HH----HHHHHHhhcC--CCCCCHHHHHHHHHHHhcccH-----HHHHHHHHHHHHHHHHHHHHHHhCCC---ceECC
Confidence 5 44 4444443332 236677778888888865421 34566777888999999999998752 45555
Q ss_pred CCceeEEecCC-CHHHHHHhHhhccEEEcCC------C--eEEecCCCCCChhHHHHHHHH
Q 015435 350 KQIGMFTFTGL-NSEQVAFMTKEYHIYMTSD------G--RISMAGLSSKTVPHLTDAIHA 401 (407)
Q Consensus 350 ~~~~~~~~~~~-~~~~~~~~l~~~gi~~~~g------g--Ris~~~~~~e~i~~~~~~l~~ 401 (407)
+. |.|.|+.+ +.+.+.++++++||.+..+ + |||++ +++++++++++|++
T Consensus 294 ~~-g~f~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~~--~~e~~~~l~~al~~ 351 (354)
T PRK04635 294 GN-GNYVLAKFDDVDAVFKALWDAGIVARAYKDPRLANCIRFSFS--NRAETDKLIGLIRN 351 (354)
T ss_pred CC-CcEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC--CHHHHHHHHHHHHH
Confidence 65 45777766 5555667777899998653 1 99987 67889999998875
No 105
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=7.3e-36 Score=278.12 Aligned_cols=317 Identities=16% Similarity=0.166 Sum_probs=235.0
Q ss_pred CCchhhhhHhhhhcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCC
Q 015435 15 EDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSP 94 (407)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~ 94 (407)
+.+++++.+.+.- ++++.++|+.|.+ +. ++| ... .. .....+|++..+ +++|+.+++++ +
T Consensus 2 ~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~--~~~--~~~----~~---~~~~~~y~~~~~-~~lr~~la~~~-~---- 61 (330)
T TIGR01140 2 GGNLRRAAARYGI-PPEDWLDFSTGIN--PL--GPP--VPP----IP---ASAWARYPDPEY-DELRAAAAAYY-G---- 61 (330)
T ss_pred CccHHHHHHHcCC-ChhheeEccccCC--CC--CCC--hhh----cc---hHHHhhCCCccH-HHHHHHHHHHh-C----
Confidence 4567888887652 3467899999984 22 222 211 11 223566866554 99999999988 4
Q ss_pred CCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHc
Q 015435 95 AIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRA 174 (407)
Q Consensus 95 ~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~ 174 (407)
+++++|++ |+|+++++.++. ..+.+| .|++++|+|..+...++..|.+++.++ |++++++.+.
T Consensus 62 -~~~~~i~~--t~G~~~~i~~~~---~~l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~~- 124 (330)
T TIGR01140 62 -LPAASVLP--VNGAQEAIYLLP---RLLAPG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAALE- 124 (330)
T ss_pred -CChhhEEE--CCCHHHHHHHHH---HHhCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhcc-
Confidence 23589999 999999999873 335677 799999999999999999999998885 7788888774
Q ss_pred CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCcc
Q 015435 175 APSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKN 254 (407)
Q Consensus 175 ~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 254 (407)
+++++++ ++||||||.+++.+++++|+++|+++|+++|+|++|.++.... ++..+.+..+++++++||||.
T Consensus 125 --~~~~v~i-~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~------~~~~~~~~~~~~i~~~S~SK~ 195 (330)
T TIGR01140 125 --ELDVLVL-CNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDA------SLAPQAARFPGLVVLRSLTKF 195 (330)
T ss_pred --cCCEEEE-eCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCcc------chhhHhccCCCEEEEEecchh
Confidence 3556666 8999999999999999999999999999999999999887531 222222335789999999999
Q ss_pred ccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHH
Q 015435 255 MGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFD 334 (407)
Q Consensus 255 ~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (407)
+|++|+|+||+ +++ ++ +.+.+..... ..+.+.++|.++..++++. .+.+..+++++++++++.+
T Consensus 196 ~g~~G~R~G~i--~~~-~~----~~~~l~~~~~--~~~~s~~~q~~~~~~l~~~-------~~~~~~~~~~~~~~~~l~~ 259 (330)
T TIGR01140 196 FGLAGLRLGFV--VAH-PA----LLARLREALG--PWTVNGPARAAGRAALADT-------AWQAATRARLAAERARLAA 259 (330)
T ss_pred hcCchhhhhhe--eCC-HH----HHHHHHhcCC--CCCchHHHHHHHHHHHhch-------HHHHHHHHHHHHHHHHHHH
Confidence 99999999999 455 44 4444444332 2356778899999898865 2345667889999999999
Q ss_pred HHHhcCCCCCcccccCCceeEEecCC-CHHHHHHhHhhccEEEcCCC----------eEEecCCCCCChhHHHHHH
Q 015435 335 ALSARGTPGDWSHIIKQIGMFTFTGL-NSEQVAFMTKEYHIYMTSDG----------RISMAGLSSKTVPHLTDAI 399 (407)
Q Consensus 335 ~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~gi~~~~gg----------Ris~~~~~~e~i~~~~~~l 399 (407)
.|++.+. +.+ .+.+++|.|+.+ +.+.+.+.|.++||.+.||. ||+++. ..++ ++++.+|
T Consensus 260 ~L~~~~~---~~~-~~~~~~f~~~~~~~~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~-~~~~~~l 329 (330)
T TIGR01140 260 LLARLGG---LEV-VGGTALFLLVRTPDAAALHEALARRGILIRDFDNFPGLDPRYLRFALPT-DEEN-DRLEEAL 329 (330)
T ss_pred HHHhCCC---ceE-CCCCCeEEEEEcCCHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEecC-HHHH-HHHHHhh
Confidence 9998863 333 345788999876 33334444445899999862 999985 4444 6666654
No 106
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=5.7e-35 Score=261.09 Aligned_cols=322 Identities=17% Similarity=0.181 Sum_probs=254.1
Q ss_pred cccCCCCCCcHHHHHHHHHHHhCCC-CCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhc
Q 015435 68 VKEYLPIVGLVDFNKLSAKLILGAD-SPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLA 146 (407)
Q Consensus 68 ~~~y~~~~g~~~l~~~~a~~~~~~~-~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~ 146 (407)
..+|++..|.+++...+.++..... ....+.-++++ |+|.|.+++..+.. .++.||.|++..++|+.....++..
T Consensus 93 alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiii--t~G~t~~l~~~l~~--~~N~gd~vlie~~ty~~AL~s~~a~ 168 (472)
T KOG0634|consen 93 ALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIII--TNGNTDGLFKVLRT--LINRGDHVLIEEYTYPSALQSMEAL 168 (472)
T ss_pred hhccccccCcHHHHHHHHHhccccccCCCCCCceEEE--ecCCchHHHHHHHH--hhcCCCceEEecccchHHHHhcccc
Confidence 4689999999999999999763122 22334458999 99999999999544 4889999999999999999999999
Q ss_pred CceeeEEEeecCCCCCcChhhHHHHHHc-------CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccc
Q 015435 147 GLSVKTYRYYDPATRGLNFQGLLEDLRA-------APSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSA 219 (407)
Q Consensus 147 G~~~~~v~~~~~~~~~~d~~~l~~~i~~-------~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~ 219 (407)
|+++++|+++ ..++++|.|++.+.. .++..+++.+++.+||||..++.+..++|.++|+||++++|+||.
T Consensus 169 gv~~ipv~md---~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdp 245 (472)
T KOG0634|consen 169 GVKIIPVKMD---QDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDP 245 (472)
T ss_pred CceEEecccc---CCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCc
Confidence 9999999882 368999999998864 134678888899999999999999999999999999999999999
Q ss_pred cccccCCC------CCchhHHHHHHH----------HcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHh
Q 015435 220 YQGFASGS------LDADAQSVRMFV----------ADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLK 283 (407)
Q Consensus 220 y~~~~~~~------~~~~~~~~~~~~----------~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~ 283 (407)
|.-+.++. .+.+.++...+. +...++|-+.||||.++ ||+|+||+ +.++. +.++.-
T Consensus 246 Yy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~i---t~~~~----~l~ril 317 (472)
T KOG0634|consen 246 YYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWI---TGNSL----FLKRIL 317 (472)
T ss_pred cceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEe---ecCHH----HHHHHh
Confidence 98777763 111222211222 22468999999999998 99999999 45443 333333
Q ss_pred hhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCC--
Q 015435 284 LVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN-- 361 (407)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-- 361 (407)
......+.+++...|.++-+.++. ...+-|.+++.+++..+..++..+.+++.+.-...-.++..|.+|+|.|+.++
T Consensus 318 ~~ae~~t~~pSg~sq~iv~a~l~~-wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~ 396 (472)
T KOG0634|consen 318 DLAEVATSGPSGFSQGIVYAMLKR-WGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYI 396 (472)
T ss_pred hhcceeecCcccccHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEeccc
Confidence 344555667888888888877764 23345778899999999999999999998742211257789999999999663
Q ss_pred -----------HHHHHHhHhhccEEEcCCC---------------eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 362 -----------SEQVAFMTKEYHIYMTSDG---------------RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 362 -----------~~~~~~~l~~~gi~~~~gg---------------Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
.+.+...+.++||.+.+|. |++++..+.|+++++++++.+++++
T Consensus 397 ~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike 466 (472)
T KOG0634|consen 397 NFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKE 466 (472)
T ss_pred ccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHH
Confidence 2346677788999998872 9999887889999999999999976
No 107
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=6.9e-35 Score=275.74 Aligned_cols=315 Identities=16% Similarity=0.190 Sum_probs=229.6
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec-CC
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC-LS 108 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t-~g 108 (407)
+.++|||++|.+ .. +.++.+.+++.+.+. ....|++. ..+++|+++++++ + +++++|++ | +|
T Consensus 33 ~~~~i~l~~~~~---~~-~~~~~~~~~~~~~~~----~~~~y~~~-~~~~lr~~ia~~~-~-----~~~~~i~~--~~~G 95 (361)
T PRK00950 33 PESIIKLGSNEN---PL-GPSPKAVEAIEKELS----KIHRYPEP-DAPELREALSKYT-G-----VPVENIIV--GGDG 95 (361)
T ss_pred ccceEEccCCCC---CC-CCCHHHHHHHHHHHH----hhcCCCCC-CHHHHHHHHHHHh-C-----CCHHHEEE--eCCC
Confidence 358999999973 22 334455555555443 24557554 4589999999998 4 23577877 5 56
Q ss_pred cccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCC
Q 015435 109 GTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAH 188 (407)
Q Consensus 109 ~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~ 188 (407)
+++++.+++ ...+.+||+|++++|+|..+...++..|++++.++. +.++++|++++++.+. ++++++++ ++|+
T Consensus 96 a~~~i~~~~--~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~l~~~~~--~~~~~v~~-~~p~ 168 (361)
T PRK00950 96 MDEVIDTLM--RTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKR--EEDFSLDVDSVLNAIT--EKTKVIFL-CTPN 168 (361)
T ss_pred HHHHHHHHH--HHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec--CCCCCcCHHHHHHHhc--cCCCEEEE-eCCC
Confidence 678888774 333679999999999999999899999999999986 4456899999999886 45677777 7999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEe
Q 015435 189 NPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIV 268 (407)
Q Consensus 189 NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v 268 (407)
||||.+++.+++.+| |+++|+++|+|++|.++... +..+ +....+++++++||||.+|++|+|+||+ +
T Consensus 169 nptG~~~~~~~l~~l---~~~~~~~li~De~y~~~~~~----~~~~---~~~~~~~vi~~~S~SK~~g~~GlRiG~~--~ 236 (361)
T PRK00950 169 NPTGNLIPEEDIRKI---LESTDALVFVDEAYVEFAEY----DYTP---LALEYDNLIIGRTFSKVFGLAGLRIGYG--F 236 (361)
T ss_pred CCCCCCcCHHHHHHH---HHHCCcEEEEECchhhhCcc----chHH---HHHhcCCEEEEEeehHhhcCchhhcchh--c
Confidence 999999998776666 77889999999999887621 1222 2334568999999999999999999999 5
Q ss_pred ecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc
Q 015435 269 CKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHI 348 (407)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 348 (407)
++ + ++...+...... .+.+.+.+.++..++.+. +++++.+++++++++++.+.|+ +.+.
T Consensus 237 ~~-~----~~~~~~~~~~~~--~~~~~~~~~~a~~~l~~~-------~~~~~~~~~~~~~r~~l~~~l~-------~~~~ 295 (361)
T PRK00950 237 VP-E----WLIDYYMRAKTP--FSLTRLSQAAAIAALSDK-------EYIEKSIEHGIKSREYLYNELP-------FKVY 295 (361)
T ss_pred CC-H----HHHHHHHHhcCC--CCCCHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHhhcC-------eeEC
Confidence 65 3 344444444333 356778888888888764 3456667778888888887764 2222
Q ss_pred cCCceeEEecCC---CHHHHHHhHhhccEEEcCC------C----eEEecCCCCCChhHHHHHHHHHHH
Q 015435 349 IKQIGMFTFTGL---NSEQVAFMTKEYHIYMTSD------G----RISMAGLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 349 ~~~~~~~~~~~~---~~~~~~~~l~~~gi~~~~g------g----Ris~~~~~~e~i~~~~~~l~~~l~ 404 (407)
+.+++|.|+.+ +.+.+.+.|.++||.+.++ + ||+++ +.+++++++++|+++++
T Consensus 296 -~~~~~~i~~~~~~~~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~--~~~~~~~l~~~L~~il~ 361 (361)
T PRK00950 296 -PSEANFVLVDVTPMTAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG--TFEENERFLEILKEIVE 361 (361)
T ss_pred -CCcceEEEEECCCCCHHHHHHHHHHCCEEEeeCCccCCCCCCeEEEECC--CHHHHHHHHHHHHHHhC
Confidence 44667888754 4455544445689999874 1 88988 56789999999988763
No 108
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=1e-34 Score=268.12 Aligned_cols=294 Identities=16% Similarity=0.200 Sum_probs=206.7
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCc
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSG 109 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~ 109 (407)
..++|||+.|.. ..+ |+.+.+++.+.+. ....|+. ...+|+++++++ + ++|++ |+|+
T Consensus 7 ~~~~i~l~~~~n----p~~-p~~~~~a~~~~~~----~~~~yp~---~~~l~~~ia~~~-~--------~~I~v--t~G~ 63 (311)
T PRK08354 7 EEGLIDFSASVN----PYP-PEWLDEMFERAKE----ISGRYTY---YEWLEEEFSKLF-G--------EPIVI--TAGI 63 (311)
T ss_pred ccceeEecCCCC----CCC-CHHHHHHHHHHHH----HhhcCCC---hHHHHHHHHHHH-C--------CCEEE--CCCH
Confidence 467999998852 212 3344444443332 2345742 467999999988 4 47999 9999
Q ss_pred ccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCC
Q 015435 110 TGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHN 189 (407)
Q Consensus 110 t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~N 189 (407)
++++.++. ..+.+||+|++++|+|+.+...++..|.+++.++ +|++.+++.+. +++++++ ++|||
T Consensus 64 ~~al~~~~---~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~--------~d~~~l~~~~~---~~~~vi~-~~P~N 128 (311)
T PRK08354 64 TEALYLIG---ILALRDRKVIIPRHTYGEYERVARFFAARIIKGP--------NDPEKLEELVE---RNSVVFF-CNPNN 128 (311)
T ss_pred HHHHHHHH---HhhCCCCeEEEeCCCcHHHHHHHHHcCCEEeecC--------CCHHHHHHhhc---CCCEEEE-ecCCC
Confidence 99998874 3345899999999999999999999999997652 57888888765 3456555 89999
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEee
Q 015435 190 PTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVC 269 (407)
Q Consensus 190 PtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~ 269 (407)
|||.+++.+++++|+++|+++|+++|+||+|.+|.+++. . ...+++++++||||.|+++|+|+||+ ++
T Consensus 129 PTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~---~-------~~~~~vi~~~S~SK~~~l~GlRiG~~--v~ 196 (311)
T PRK08354 129 PDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPE---S-------PEGENIIKLRTFTKSYGLPGIRVGYV--KG 196 (311)
T ss_pred CCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhcccccc---c-------cCCCcEEEEeccHhhcCCccceeeee--ee
Confidence 999999999999999999999999999999999987631 1 11568999999999999999999999 45
Q ss_pred cChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc
Q 015435 270 KTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHII 349 (407)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 349 (407)
. .+. +......+ ..+...+.++..++++. + +++.+.++.+.++++.+.+.+ ...
T Consensus 197 ~----~~~----l~~~~~~~--~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~l~~~l----------~~~ 250 (311)
T PRK08354 197 F----EEA----FRSVRMPW--SIGSTGYAFLEFLIEDD-----F-EHLRKTMPLIWREKERFEKAL----------YVK 250 (311)
T ss_pred h----HHH----HHHcCCCc--cCCHHHHHHHHHHHHhH-----H-HHHHHHHHHHHHHHHHHHHhc----------CCC
Confidence 1 222 33233222 44455566666665532 1 223344444444444443332 124
Q ss_pred CCceeEEecCC-CHHHHHHhHhhccEEEcCCC--------eEEecCCCCCChhHHHHHHHHH
Q 015435 350 KQIGMFTFTGL-NSEQVAFMTKEYHIYMTSDG--------RISMAGLSSKTVPHLTDAIHAA 402 (407)
Q Consensus 350 ~~~~~~~~~~~-~~~~~~~~l~~~gi~~~~gg--------Ris~~~~~~e~i~~~~~~l~~~ 402 (407)
+.++++. +.+ +.+.+.+.+.++||.+.||. ||+++. +++.+++.+.|+++
T Consensus 251 ~~~~~~~-~~~~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~~--~~~~~~l~~al~~~ 309 (311)
T PRK08354 251 SDANFFI-KDVGDAEKFVEFLKRNGILVRDCTSFGLPGYIRFSVRD--REENEKLIRALREW 309 (311)
T ss_pred CCCcEEE-EECCCHHHHHHHHHHCCeEEEecccCCCCCeEEEEeCC--HHHHHHHHHHHHHh
Confidence 6677666 444 44445555667899999873 999884 45677777777764
No 109
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=9.4e-32 Score=258.21 Aligned_cols=339 Identities=11% Similarity=0.047 Sum_probs=235.0
Q ss_pred cCCCCeeeeeeeeeecCCCccccc---hhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 28 DTSPVKLNLGVGAYRTEEGKPLVL---NVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 28 ~~~~~~i~l~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
..+.++|+|++|.|. .|. +.|. +...+..+++. . ...+|++..|.++||+++++++ +. +++++
T Consensus 33 ~~g~~~~~L~~g~p~-~D~-~tds~t~a~~~a~~~a~~--~-g~~~Y~~~~g~~~Lreaia~~~-~~-------~~vv~- 98 (460)
T PRK13238 33 EAGYNPFLLKSEDVF-IDL-LTDSGTGAMSDRQWAAMM--R-GDEAYAGSRSYYRLEDAVKDIF-GY-------PYTIP- 98 (460)
T ss_pred HcCCCEEeCCCCCCC-CCC-CCCCCchhhhHHHHHHHH--h-CCcccCCCCCHHHHHHHHHHHh-CC-------CcEEE-
Confidence 456899999999862 133 3333 45555556664 2 2456999999999999999999 53 57888
Q ss_pred ecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecC------CCC--CcChhhHHHHHHcC-
Q 015435 105 QCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDP------ATR--GLNFQGLLEDLRAA- 175 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~------~~~--~~d~~~l~~~i~~~- 175 (407)
|+||++|+.+++ ...+++|| |++++|.|..+...++..|++++.+++... +.+ .+|+++|++.+++.
T Consensus 99 -t~ggt~A~~~~~--~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~ 174 (460)
T PRK13238 99 -THQGRAAEQILF--PVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVG 174 (460)
T ss_pred -CCCHHHHHHHHH--HHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcC
Confidence 999999999994 55588999 999999999999999999999999998421 123 49999999999743
Q ss_pred -CCCcEEEEecCCCCCCC-CCCCHHHHHHHHHHHHHcCceeeecccccc--ccCCCC---CchhHHHHHHHHcCCcEEEE
Q 015435 176 -PSGAIVLLHACAHNPTG-VDPTLEQWEQIRQLMRSKGLLPFFDSAYQG--FASGSL---DADAQSVRMFVADGGECLVA 248 (407)
Q Consensus 176 -~~~~~v~i~~~p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~D~~y~~--~~~~~~---~~~~~~~~~~~~~~~~~i~~ 248 (407)
++++++++ ++|+|||| .+++.+++++|+++|++||++||+|+++.. ..+... .....++..+ +..+
T Consensus 175 ~~~tk~Ivl-~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i------~~~~ 247 (460)
T PRK13238 175 AENVPFIVM-TITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI------AREM 247 (460)
T ss_pred CCceeEEEE-ecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH------hhhh
Confidence 24566666 89999997 999999999999999999999999997632 222110 0011122211 2334
Q ss_pred EecCccccccCCCc-----ceeEEeecChhhHHHHHHHHhhhhhcccCCC-ChhHHHHHHHHhcChhhHHhHHHHHHHHH
Q 015435 249 QSYAKNMGLYGERV-----GALSIVCKTEDVASRVESQLKLVIRPMYSSP-PIHGASIVATILKDSTMYKEWTLELKAMA 322 (407)
Q Consensus 249 ~s~sK~~~~~G~r~-----G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 322 (407)
+|++|.+.++|+|+ |+++ +++++++.+++....-......+++. +...|.++...+.... . .+++..
T Consensus 248 ~s~~D~~~~Sg~K~g~~~~GG~i-~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~-~---~~~~~~-- 320 (460)
T PRK13238 248 FSYADGLTMSAKKDAMVNIGGLL-CFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGM-D---EDYLAY-- 320 (460)
T ss_pred cccCcEEEEecccCCCCcceeEE-EcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhh-C---hHHHHH--
Confidence 66777777777765 3331 45555555544332111112223333 3333556555554310 0 022222
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCC-------------CHHHHHHhHhhccEEEcCCC---------
Q 015435 323 DRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL-------------NSEQVAFMTKEYHIYMTSDG--------- 380 (407)
Q Consensus 323 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~l~~~gi~~~~gg--------- 380 (407)
..+++++|.+.|++.| +.+..|.||+|++++. +..++.+++++.||.+.|+|
T Consensus 321 --~~~~~~~l~~~L~~~G----~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~ 394 (460)
T PRK13238 321 --RIGQVEYLGEGLEEAG----VPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPK 394 (460)
T ss_pred --HHHHHHHHHHHHHHCC----CCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCC
Confidence 2335799999999988 7888899999998844 23467899999999998853
Q ss_pred ------------eEEecC--CCCCChhHHHHHHHHHHH
Q 015435 381 ------------RISMAG--LSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 381 ------------Ris~~~--~~~e~i~~~~~~l~~~l~ 404 (407)
|+++.. .+.+.++.++++|+.+.+
T Consensus 395 ~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 395 TGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKE 432 (460)
T ss_pred CccccCCccceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 888874 377889999999998774
No 110
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=2.2e-31 Score=250.85 Aligned_cols=333 Identities=20% Similarity=0.279 Sum_probs=247.3
Q ss_pred eeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHH
Q 015435 34 LNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSL 113 (407)
Q Consensus 34 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~ 113 (407)
+||+.|.+ .. ..++..+.+....- .......|.+..|..++++.+++++....+.....+++++ ++|+++++
T Consensus 1 ~~~~~~~~---~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~--~~~~t~a~ 72 (350)
T cd00609 1 IDLSIGEP---DF-PPPPEVLEALAAAA--LRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVV--TNGAQEAL 72 (350)
T ss_pred CCCCCCCC---CC-CCCHHHHHHHHHHh--hccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEE--ecCcHHHH
Confidence 57787765 11 22333333333311 2334566888999999999999999554333334578999 99999999
Q ss_pred HHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcCh--hhHHHHHHcCCCCcEEEEecCCCCCC
Q 015435 114 RVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNF--QGLLEDLRAAPSGAIVLLHACAHNPT 191 (407)
Q Consensus 114 ~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~--~~l~~~i~~~~~~~~v~i~~~p~NPt 191 (407)
..++ .....+||+|++++++|.++...++..|.+++.++.++ ....+. +.+++... ++++++++ ++++|||
T Consensus 73 ~~~~--~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~--~~~~~v~i-~~~~~~t 145 (350)
T cd00609 73 SLLL--RALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDE--EGGFLLDLELLEAAKT--PKTKLLYL-NNPNNPT 145 (350)
T ss_pred HHHH--HHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEeccc--ccCCccCHHHHHhhcC--ccceEEEE-ECCCCCC
Confidence 9985 33367899999999999999999999999999999842 333433 45555443 56677777 5699999
Q ss_pred CCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecC
Q 015435 192 GVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKT 271 (407)
Q Consensus 192 G~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~ 271 (407)
|.+++.+++++|+++|+++|+++|+|++|+.+.+.+.... ........+.+++++|++|.++.+|.|+|++ ++++
T Consensus 146 G~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i--~~~~ 220 (350)
T cd00609 146 GAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPP---ALALLDAYERVIVLRSFSKTFGLPGLRIGYL--IAPP 220 (350)
T ss_pred CcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccc---cccCcCccCcEEEEeecccccCCcccceEEE--ecCH
Confidence 9999999999999999999999999999998876543211 1111233457899999999999899999999 5663
Q ss_pred hhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCC
Q 015435 272 EDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQ 351 (407)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 351 (407)
++ +.+.+.......+.+++...+.++..+++... +..++.+++++++++++.+.|++.+. .....+.
T Consensus 221 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~ 287 (350)
T cd00609 221 EE----LLERLKKLLPYTTSGPSTLSQAAAAAALDDGE------EHLEELRERYRRRRDALLEALKELGP---LVVVKPS 287 (350)
T ss_pred HH----HHHHHHHHHHhcccCCChHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHHHhcCC---ccccCCC
Confidence 34 44444444444456788888888888887653 44677888899999999999998873 2224567
Q ss_pred ceeEEecCCC----HHHHHHhHhhccEEEcCC------C----eEEecCCCCCChhHHHHHHH
Q 015435 352 IGMFTFTGLN----SEQVAFMTKEYHIYMTSD------G----RISMAGLSSKTVPHLTDAIH 400 (407)
Q Consensus 352 ~~~~~~~~~~----~~~~~~~l~~~gi~~~~g------g----Ris~~~~~~e~i~~~~~~l~ 400 (407)
++++.|+.+. .+.+.++++++||.+.++ + ||+++.. .+|+++++++|+
T Consensus 288 ~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~-~~~i~~~~~al~ 349 (350)
T cd00609 288 GGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP-EEELEEALERLA 349 (350)
T ss_pred ccEEEEEecCCCChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC-HHHHHHHHHHhh
Confidence 7888888653 456778888899999886 3 9999974 889999998886
No 111
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.9e-31 Score=231.07 Aligned_cols=338 Identities=16% Similarity=0.206 Sum_probs=265.5
Q ss_pred ccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCe
Q 015435 49 LVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLT 128 (407)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~ 128 (407)
.|..+++++.+-+....+....|+.+.|++-+|+.+|+++...++.+.++++|++ |.|++.++..++.++. -.+.+.
T Consensus 87 fp~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~L--T~GAS~ai~~il~l~~-~~~~~G 163 (475)
T KOG0258|consen 87 FPTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFL--TTGASPAIRSILSLLI-AGKKTG 163 (475)
T ss_pred CCHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeee--cCCCcHHHHHHHHHHh-cCCCCc
Confidence 4667777777666533446778999999999999999999888888889999999 9999999999865542 237789
Q ss_pred EEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCC--CcEEEEecCCCCCCCCCCCHHHHHHHHHH
Q 015435 129 IYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPS--GAIVLLHACAHNPTGVDPTLEQWEQIRQL 206 (407)
Q Consensus 129 Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~--~~~v~i~~~p~NPtG~~~~~~~l~~i~~~ 206 (407)
|++|-|.|+-|...+..+|...+.+-++++++|.+|.++|++.+.++.+ ++.++++.||.||||.+++.+.+++|+.+
T Consensus 164 vliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~f 243 (475)
T KOG0258|consen 164 VLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICF 243 (475)
T ss_pred eEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHH
Confidence 9999999999999999999999999998888899999999999876421 23334447999999999999999999999
Q ss_pred HHHcCceeeeccccccccCCCCCchhHHHHHHH-HcC------CcEEEEEecCccc-cccCCCcceeEEeecChhhHHHH
Q 015435 207 MRSKGLLPFFDSAYQGFASGSLDADAQSVRMFV-ADG------GECLVAQSYAKNM-GLYGERVGALSIVCKTEDVASRV 278 (407)
Q Consensus 207 ~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~-~~~------~~~i~~~s~sK~~-~~~G~r~G~~~~v~~~~~~~~~~ 278 (407)
|.+++++|+.||+|++.++.+ ..+.+++.... ..+ ...+.++|.||.+ |-+|.|-|+..++-.+++..+.+
T Consensus 244 a~~~~l~llaDEVYQ~Nvy~~-~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi 322 (475)
T KOG0258|consen 244 AAEEGLVLLADEVYQDNVYTT-GSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQI 322 (475)
T ss_pred HHHcCeEEechHHHHhhccCC-CcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHH
Confidence 999999999999999999874 34566665543 222 2447788999986 56899999998666677777765
Q ss_pred HHHHhhhhhcccCCCChhHHHHHHHHhc----ChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCcee
Q 015435 279 ESQLKLVIRPMYSSPPIHGASIVATILK----DSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGM 354 (407)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 354 (407)
.+... . ..+++..+|........ ....+++|....+.....++.+...+.+.++++.. +...+++|.+
T Consensus 323 ~Kl~s-i----~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~g---i~cn~~qGAM 394 (475)
T KOG0258|consen 323 KKLAS-I----KLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEG---ISCNPVQGAM 394 (475)
T ss_pred HHHHh-h----hhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCc---eeeccCccce
Confidence 55222 2 23666677777766554 23566778888888999999999999999999864 8888999999
Q ss_pred EEecCC---------------CHH-H-HHHhHhhccEEEcCCC-----------eEEecCCCCCChhHHHHHHHHH
Q 015435 355 FTFTGL---------------NSE-Q-VAFMTKEYHIYMTSDG-----------RISMAGLSSKTVPHLTDAIHAA 402 (407)
Q Consensus 355 ~~~~~~---------------~~~-~-~~~~l~~~gi~~~~gg-----------Ris~~~~~~e~i~~~~~~l~~~ 402 (407)
|.|..+ ..+ + +.+||++.||++.||. |.++.. .. + ..+++++++
T Consensus 395 Y~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp--~~-~-~~i~~~~~f 466 (475)
T KOG0258|consen 395 YLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILP--PG-L-EIIEKFKKF 466 (475)
T ss_pred eecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecC--ch-h-HHHHHHHHH
Confidence 999743 223 3 5689999999999982 777664 22 4 666666654
No 112
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=2.2e-29 Score=214.74 Aligned_cols=361 Identities=16% Similarity=0.152 Sum_probs=253.4
Q ss_pred chhhhhHhhhh-cCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhcc---ccccccCCCCCCcHHHHHHHHHHHhCCC
Q 015435 17 PILGVTVAYNK-DTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVND---QSRVKEYLPIVGLVDFNKLSAKLILGAD 92 (407)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~y~~~~g~~~l~~~~a~~~~~~~ 92 (407)
.|..+|..+.. -..+..|.|+.|.| .--|-.....+...+.+..+ .....+|+.++|...+.+++++.+...+
T Consensus 15 Gi~~lMdDl~d~Lrt~g~imLggGNP---a~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~y 91 (417)
T COG3977 15 GITQLMDDLNDGLRTPGAIMLGGGNP---ARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREY 91 (417)
T ss_pred hHHHHHHHHHhhccCCCceeeCCCCc---ccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHh
Confidence 46777777763 23356899997764 22122223333333333311 1345689999999999999999999989
Q ss_pred CCCCCCCceEEeecCCcccHHHHHHHHHHhh-cCCC--eEEec-CCCCCChHHHHhhcCceeeE---EEeecCCC---CC
Q 015435 93 SPAIKDNRVTTVQCLSGTGSLRVGAEFLARH-YHQL--TIYIP-QPTWGNHPKVFTLAGLSVKT---YRYYDPAT---RG 162 (407)
Q Consensus 93 ~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~-~~gd--~Vi~~-~p~y~~~~~~~~~~G~~~~~---v~~~~~~~---~~ 162 (407)
+..+++.||.+ |+|++.+...++.+...- ..|+ +|+.| .|.|.+|.++.-.-..=|.. +.+ .+.+ +.
T Consensus 92 gwnit~~NIal--TnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel-~~~g~FKY~ 168 (417)
T COG3977 92 GWNITAQNIAL--TNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIEL-LPAGQFKYH 168 (417)
T ss_pred CCCCccceeee--cCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCccc-ccccceeec
Confidence 99999999999 999999998886554322 2454 46666 59999997754321111111 111 1111 34
Q ss_pred cChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcC
Q 015435 163 LNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADG 242 (407)
Q Consensus 163 ~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~ 242 (407)
+|++.+.- . .++.++++ +.|.||||.+++.+++.+|.++|++||+.+|.|.+|..-..+=.-.+.. .-..
T Consensus 169 vDF~~l~i--~--e~~g~ic~-SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~-----~~w~ 238 (417)
T COG3977 169 VDFEHLHI--G--ESTGAICV-SRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDAT-----PLWN 238 (417)
T ss_pred cCHHHccc--c--cccceEEe-cCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceeccccc-----ccCC
Confidence 56666553 2 45777777 9999999999999999999999999999999999996322110100111 1235
Q ss_pred CcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHH
Q 015435 243 GECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMA 322 (407)
Q Consensus 243 ~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 322 (407)
++++.+.|+|| .|+||.|+|-+ ++. +++.+.+.++.......+..+++.++..+++..++...-. +..|
T Consensus 239 ~NiilC~SLSK-~GLPG~R~GIi--Ian-----e~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlse---qVIr 307 (417)
T COG3977 239 ENIILCMSLSK-LGLPGSRCGII--IAN-----EKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSE---QVIR 307 (417)
T ss_pred CCEEEEeehhh-cCCCCcceeEE--Ecc-----HHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHH---Hhhh
Confidence 79999999999 58999999999 566 7788888877776777899999999999999876532211 1234
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEec-----CCCHHHHHHhHhhccEEEcCCC-----------------
Q 015435 323 DRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFT-----GLNSEQVAFMTKEYHIYMTSDG----------------- 380 (407)
Q Consensus 323 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~gi~~~~gg----------------- 380 (407)
-.++.+.+...+.|+..-....+....|.|.+|.|+ +++.+.+.+.|++.|+.+.||.
T Consensus 308 PFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~ 387 (417)
T COG3977 308 PFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCM 387 (417)
T ss_pred HHHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceE
Confidence 445555555555555431122377789999999997 4477888888999999999982
Q ss_pred eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 381 RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 381 Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
|+++.. +++.++..+.+|.+.+++
T Consensus 388 Rmn~~~-~~~~ie~Gva~lae~ve~ 411 (417)
T COG3977 388 RMNYVP-EPEKIEKGVAILAEEVER 411 (417)
T ss_pred EEecCC-CHHHHHHHHHHHHHHHHH
Confidence 999986 889999999999988765
No 113
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.97 E-value=1.3e-27 Score=228.68 Aligned_cols=327 Identities=15% Similarity=0.135 Sum_probs=218.8
Q ss_pred CCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCC---Cc----HHHHHHHHHHHhCCCCCCCCCCce
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIV---GL----VDFNKLSAKLILGADSPAIKDNRV 101 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~---g~----~~l~~~~a~~~~~~~~~~~~~~~i 101 (407)
++.++|||+.|.| .|.+.++++++++.+.+. . ...+|+++. |. .++++++++++ +. +++
T Consensus 36 ~g~~~i~~~~~~~---lg~~~~~~v~~~~~~~~~--~-~~~~~~~s~~~~G~~~~~~~le~~ia~~~-g~-------~~~ 101 (393)
T TIGR01822 36 DGREVLNFCANNY---LGLSSHPDLIQAAKDALD--E-HGFGMSSVRFICGTQDIHKELEAKIAAFL-GT-------EDT 101 (393)
T ss_pred CCceEEEeeCCCc---cccCCCHHHHHHHHHHHH--H-hCCCCCCcCcccCChHHHHHHHHHHHHHh-CC-------CcE
Confidence 5678999999986 455667788888888775 1 112455544 65 78899999988 53 578
Q ss_pred EEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC--C--C
Q 015435 102 TTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA--P--S 177 (407)
Q Consensus 102 ~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~--~--~ 177 (407)
++ ++|+++|+..++ ...+.+||.|++++|.|+.+...++..+.+.+.++ ..|++++++.+.+. + +
T Consensus 102 ii--~~~~~~a~~~~~--~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~ 170 (393)
T TIGR01822 102 IL--YASCFDANGGLF--ETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGAR 170 (393)
T ss_pred EE--ECchHHHHHHHH--HHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCC
Confidence 88 889999999874 44578999999999999999998888887765442 26889999988742 1 4
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHH-cCCcEEEEEecCcccc
Q 015435 178 GAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVA-DGGECLVAQSYAKNMG 256 (407)
Q Consensus 178 ~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~ 256 (407)
++++++ ++++||||.+.+ +++|+++|++||++||+|++|.....+ .... +...... ..+..++++|+||.++
T Consensus 171 ~~~v~~-~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~-~~~~--~~~~~~~~~~~~di~~~s~sK~l~ 243 (393)
T TIGR01822 171 HRLIAT-DGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLG-PTGR--GSHELCGVMGRVDIITGTLGKALG 243 (393)
T ss_pred ceEEEE-eCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcC-CCCC--chHHhcCCCCCCeEEEEEChHHhh
Confidence 445554 778999999764 888888999999999999998532221 1111 1111111 1245689999999864
Q ss_pred ccCCCcceeEEeecChhhHHHHHHHHhhhhhcc-cC-CCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHH
Q 015435 257 LYGERVGALSIVCKTEDVASRVESQLKLVIRPM-YS-SPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFD 334 (407)
Q Consensus 257 ~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (407)
|+|+||+ +++ +++.+.+.. ..... .. +.+...+.++..+++.. +..++.+++++++++++.+
T Consensus 244 --g~r~G~~--~~~-~~~~~~l~~----~~~~~~~~~~~~~~~~~a~~~al~~~-------~~~~~~~~~~~~~~~~l~~ 307 (393)
T TIGR01822 244 --GASGGFT--TAR-KEVVELLRQ----RSRPYLFSNSLPPAVVGASIKVLEML-------EASNELRDRLWANTRYFRE 307 (393)
T ss_pred --CCCcEEE--EeC-HHHHHHHHH----hCccceecCCCCHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHH
Confidence 7899998 454 544444333 21111 12 22333334444444311 2245677889999999999
Q ss_pred HHHhcCCCCCcccccCCceeEEecCC---CHHHHHHhHhhccEEEcC-------CC----eEEecC-CCCCChhHHHHHH
Q 015435 335 ALSARGTPGDWSHIIKQIGMFTFTGL---NSEQVAFMTKEYHIYMTS-------DG----RISMAG-LSSKTVPHLTDAI 399 (407)
Q Consensus 335 ~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gi~~~~-------gg----Ris~~~-~~~e~i~~~~~~l 399 (407)
.|++.+ +.+..+.+.++.+.-. +.+.+...|.++||.+.. .+ ||+++. .+++++++++++|
T Consensus 308 ~L~~~g----~~~~~~~~~~~~i~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l 383 (393)
T TIGR01822 308 RMEAAG----FDIKPADHPIIPVMLYDAVLAQRFARRLLEEGIYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAF 383 (393)
T ss_pred HHHHcC----CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHH
Confidence 998876 4544444444433211 233343334446998862 12 777654 4789999999999
Q ss_pred HHHHHhhC
Q 015435 400 HAAVTRMG 407 (407)
Q Consensus 400 ~~~l~~~~ 407 (407)
+++++++|
T Consensus 384 ~~~~~~~~ 391 (393)
T TIGR01822 384 TRIGRELG 391 (393)
T ss_pred HHHHHHhC
Confidence 99988764
No 114
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.96 E-value=4.2e-28 Score=229.75 Aligned_cols=341 Identities=12% Similarity=0.072 Sum_probs=229.3
Q ss_pred cCCCCeeeeeeeeeecCCCccc-cchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec
Q 015435 28 DTSPVKLNLGVGAYRTEEGKPL-VLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC 106 (407)
Q Consensus 28 ~~~~~~i~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t 106 (407)
+.+-+.+.|..+.+......+. ......+..+++. ..+ ..|++..|..+|++++++++ +. +++++ |
T Consensus 8 ~~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~--~gd-~~Y~~~~g~~~Leeaia~~~-g~-------~~vv~--t 74 (431)
T cd00617 8 EAGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMM--LGD-EAYAGSKSFYDLEDAVQDLF-GF-------KHIIP--T 74 (431)
T ss_pred HcCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHH--hCC-CccCCCCCHHHHHHHHHHHH-CC-------CeEEE--c
Confidence 3467888888886522111111 1133344445554 223 34999999999999999998 54 68888 9
Q ss_pred CCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecC--------CCCCcChhhHHHHHHcC--C
Q 015435 107 LSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDP--------ATRGLNFQGLLEDLRAA--P 176 (407)
Q Consensus 107 ~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~--------~~~~~d~~~l~~~i~~~--~ 176 (407)
+||++|+.+++ ...+.+||.| +++|+|..+...+...|++++.+++..+ ..+.+|++++++.+++. .
T Consensus 75 ~~Gt~Al~la~--~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~ 151 (431)
T cd00617 75 HQGRGAENILF--SILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAE 151 (431)
T ss_pred CCHHHHHHHHH--HHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCC
Confidence 99999999984 4458899987 6899999999999999999999998422 22459999999999743 1
Q ss_pred CCcEEEEecCCCCCC-CCCCCHHHHHHHHHHHHHcCceeeeccccccc--cCC---CCCchhHHHHHHHHcCCcEEEEEe
Q 015435 177 SGAIVLLHACAHNPT-GVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGF--ASG---SLDADAQSVRMFVADGGECLVAQS 250 (407)
Q Consensus 177 ~~~~v~i~~~p~NPt-G~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~--~~~---~~~~~~~~~~~~~~~~~~~i~~~s 250 (407)
+++++++ ++|+||+ |..++.+++++|.++|++||++||+|++.... .+. +......++.. .++.++|
T Consensus 152 ~~~~I~v-~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~e------i~~e~~s 224 (431)
T cd00617 152 NIPYIVL-TITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAE------IAREMFS 224 (431)
T ss_pred CccEEEE-ECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHH------HHHHhhc
Confidence 2455666 8999998 99999999999999999999999999994321 110 00001112221 1345677
Q ss_pred cCccccccCCC------cceeEEeecChhhHHHHHHHHhhhhhcccCCC-ChhHHHHHHHHhcChhhHHhHHHHHHHHHH
Q 015435 251 YAKNMGLYGER------VGALSIVCKTEDVASRVESQLKLVIRPMYSSP-PIHGASIVATILKDSTMYKEWTLELKAMAD 323 (407)
Q Consensus 251 ~sK~~~~~G~r------~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 323 (407)
++|.+.++|+| .||+ +++++++.+++.............+. +...+.++...|+... + .+.+.+
T Consensus 225 ~sd~~~mS~~K~~~~~~GG~i--~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~------~-~~~l~~ 295 (431)
T cd00617 225 YADGCTMSAKKDGLVNIGGFL--ALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAV------E-EDYLRH 295 (431)
T ss_pred cCCEEEEEeecCCCCccceEE--EeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcc------c-HHHHHH
Confidence 88888878777 4577 67766666654432211111111122 2222233332443211 1 122334
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCC------------H-HHHHHhHhhccEEEcCC-----------
Q 015435 324 RIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN------------S-EQVAFMTKEYHIYMTSD----------- 379 (407)
Q Consensus 324 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------~-~~~~~~l~~~gi~~~~g----------- 379 (407)
+++ +++++.+.|++.| +.+..|.|++++|++.. . .++.+++++.||.+..-
T Consensus 296 ~~~-~r~~l~~~L~~~G----~~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~ 370 (431)
T cd00617 296 RVE-QVRYLGDRLDEAG----VPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNT 370 (431)
T ss_pred HHH-HHHHHHHHHHHCC----CCccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCC
Confidence 444 5599999999998 78888999999998542 2 34668889999986431
Q ss_pred C----------eEEecC--CCCCChhHHHHHHHHHHHh
Q 015435 380 G----------RISMAG--LSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 380 g----------Ris~~~--~~~e~i~~~~~~l~~~l~~ 405 (407)
| |+++.. .+.+.++.++++|..++++
T Consensus 371 ~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 371 GENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred CcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 1 888764 4778999999999998864
No 115
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.96 E-value=5.4e-28 Score=230.27 Aligned_cols=337 Identities=14% Similarity=0.116 Sum_probs=220.4
Q ss_pred cCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 28 DTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 28 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
..+.++|||..|.+.++.| +.++.+.+++.+++.+-......| +.....++.+.+++++ +. +++++ ++
T Consensus 24 ~~g~~~id~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~-g~-------~~~~~--~~ 91 (379)
T TIGR00707 24 VNGKEYLDFVAGIAVNSLG-HAHPKLVEALKEQLEKLVHVSNLY-YTEPQEELAEKLVEHS-GA-------DRVFF--CN 91 (379)
T ss_pred CCCCEEEEcCcchhhccCC-CCCHHHHHHHHHHHhhcccccccc-CCHHHHHHHHHHHhhC-CC-------CEEEE--eC
Confidence 3568999999987655566 555677777777775111111223 3344666777777765 42 58999 99
Q ss_pred CcccHHHHHHHHHHhhc-----CCCeEEecCCCCCChHHHHhhcCceeeE----EEeecCCCCC--cChhhHHHHHHcCC
Q 015435 108 SGTGSLRVGAEFLARHY-----HQLTIYIPQPTWGNHPKVFTLAGLSVKT----YRYYDPATRG--LNFQGLLEDLRAAP 176 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~-----~gd~Vi~~~p~y~~~~~~~~~~G~~~~~----v~~~~~~~~~--~d~~~l~~~i~~~~ 176 (407)
||++++.+++.++.... ++|+|++++|+|+.+.......+..... .++..+.... .|++++++.+. +
T Consensus 92 sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~--~ 169 (379)
T TIGR00707 92 SGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAID--D 169 (379)
T ss_pred CcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhh--h
Confidence 99999999976554322 3799999999999887776655543321 2221111111 17899999887 4
Q ss_pred CCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccc
Q 015435 177 SGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNM 255 (407)
Q Consensus 177 ~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 255 (407)
+++++++ ++++||+|.. ++.+++++|.++|+++|+++|+||+|.++++.+ ...+.... ....++ .+|||.+
T Consensus 170 ~~~~v~~-~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g---~~~~~~~~-~~~~d~---~t~sK~~ 241 (379)
T TIGR00707 170 ETAAVIV-EPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTG---KFFAYEHY-GIEPDI---ITLAKGL 241 (379)
T ss_pred CeeEEEE-EccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---hhhhHHhc-CCCCCE---EEEcccc
Confidence 5667777 5557777764 789999999999999999999999998887643 11222222 222333 3689999
Q ss_pred cccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHH
Q 015435 256 GLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDA 335 (407)
Q Consensus 256 ~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 335 (407)
+ +|+|+||+ +++ + ++.+.+.........+.++++|.++.++++... ....+++++++++++.+.
T Consensus 242 ~-~G~riG~~--~~~-~----~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~--------~~~~~~~~~~~~~~~~~~ 305 (379)
T TIGR00707 242 G-GGVPIGAT--LAK-E----EVAEAFTPGDHGSTFGGNPLACAAALAVLEVIE--------KERLLENVKEKGDYFKER 305 (379)
T ss_pred c-CCcccEEE--EEc-H----HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH--------hhhHHHHHHHHHHHHHHH
Confidence 9 99999999 565 3 355545443333344678888888887775321 123456666777777777
Q ss_pred HHhcCCCCCcccccCCceeEEecCC--CHHHHHHhHhhccEEEcCCC----eEEecC-CCCCChhHHHHHHHHHH
Q 015435 336 LSARGTPGDWSHIIKQIGMFTFTGL--NSEQVAFMTKEYHIYMTSDG----RISMAG-LSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 336 l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~~~~gg----Ris~~~-~~~e~i~~~~~~l~~~l 403 (407)
|++.+....+....+ .|.+.|+.+ +...+.+.|.++||.+.|++ ||+++. .+++++++++++|++++
T Consensus 306 l~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 306 LEELGKNYPNKEVRG-KGLMLGIELEAPCKDIVKKALEKGLLVNCAGPKVLRFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred HHHHHhhCCCCcccc-CceEEEEEecCcHHHHHHHHHHCCcEEeeCCCCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 765532111222223 455555544 34455555677899999865 888643 58899999999998763
No 116
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=4.2e-28 Score=232.30 Aligned_cols=338 Identities=13% Similarity=0.150 Sum_probs=217.1
Q ss_pred cCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 28 DTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 28 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
.+++++|||..|.+..+.| +..+.+.+++.+++. ... + .......++++++++++....+ .+++++ |+
T Consensus 36 ~dg~~~iD~~~g~~~~~lG-~~~p~v~~a~~~~~~-~~~--~--~~~~~~~~~~~~la~~l~~~~~----~~~v~~--~~ 103 (396)
T PRK02627 36 DDGKEYLDFLAGIAVNNLG-HCHPKLVEAIQEQAA-KLI--H--TSNLYYIEPQEELAEKLVELSG----MDKVFF--CN 103 (396)
T ss_pred CCCCEEEECCccHHhccCC-CCCHHHHHHHHHHHh-hcc--c--cccccCCHHHHHHHHHHHhhcC----CCEEEE--CC
Confidence 4678999999997755556 544566667766664 111 1 1111224667777777744322 279999 99
Q ss_pred CcccHHHHHHHHHHhhcCC-----CeEEecCCCCCChHHHHhhcCceeeE-EEeecCCCCCc------ChhhHHHHHHcC
Q 015435 108 SGTGSLRVGAEFLARHYHQ-----LTIYIPQPTWGNHPKVFTLAGLSVKT-YRYYDPATRGL------NFQGLLEDLRAA 175 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~~g-----d~Vi~~~p~y~~~~~~~~~~G~~~~~-v~~~~~~~~~~------d~~~l~~~i~~~ 175 (407)
||++|++++++++...... ++|++..++|.++.......+..... .+. .+...++ |++++++.+.
T Consensus 104 gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~l~~~i~-- 180 (396)
T PRK02627 104 SGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGF-EPLVEGFIYVPFNDIEALKAAIT-- 180 (396)
T ss_pred CcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccC-CCCCCCceEeCCCCHHHHHHhcC--
Confidence 9999999997765443321 78999999998876655443322211 000 0101122 8899999885
Q ss_pred CCCcEEEEecCCCCCCC-CCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCcc
Q 015435 176 PSGAIVLLHACAHNPTG-VDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKN 254 (407)
Q Consensus 176 ~~~~~v~i~~~p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 254 (407)
++++++++ .+++|||| ..++++.+++|.++|++||++||+||+|.++.+.+. ..+...+ ....+ +.+|||.
T Consensus 181 ~~~~~vii-~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~---~~~~~~~-~~~pd---i~t~sK~ 252 (396)
T PRK02627 181 DKTAAVML-EPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGK---LFAYQHY-GIEPD---IMTLAKG 252 (396)
T ss_pred CCeEEEEE-ecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCc---eeeehhc-CCCCC---EEEEcch
Confidence 55677777 66799999 688999999999999999999999999998876541 1222111 11222 3469999
Q ss_pred ccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHH
Q 015435 255 MGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFD 334 (407)
Q Consensus 255 ~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (407)
++ +|+|+||+ +++ +.+.+.+.......+++.+++.|.++.++++... . +...++++++.+.+.+
T Consensus 253 ~~-~G~rig~~--~~~-----~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~------~--~~~~~~~~~~~~~~~~ 316 (396)
T PRK02627 253 LG-GGVPIGAV--LAK-----EKVADVFTPGDHGSTFGGNPLACAAALAVIEIIE------E--EGLLENAAEVGEYLRA 316 (396)
T ss_pred hh-CCcccEEE--EEc-----HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHh------h--ccHHHHHHHHHHHHHH
Confidence 99 99999999 566 3455545433334455788889999888886432 0 1233444444555555
Q ss_pred HHHhcCCCC-CcccccCCceeEEecCC--CHHH-HHHhHhhccEEEcCCC----eEEec-CCCCCChhHHHHHHHHHHHh
Q 015435 335 ALSARGTPG-DWSHIIKQIGMFTFTGL--NSEQ-VAFMTKEYHIYMTSDG----RISMA-GLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 335 ~l~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~-~~~~l~~~gi~~~~gg----Ris~~-~~~~e~i~~~~~~l~~~l~~ 405 (407)
.|.++.... .+....+ .|.+.|+.+ +... ...+++ +||.+.|++ ||+++ ..+++++++++++|++++++
T Consensus 317 ~l~~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~l~~-~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~ 394 (396)
T PRK02627 317 KLRELLEKYPGIKEVRG-LGLMIGIELDRPAAEIVKKALE-KGLLINVTGDNVLRLLPPLIISKEEIDEAVDRLEEVLKE 394 (396)
T ss_pred HHHHHHHhCCCeeeecc-CcEEEEEEecCcHHHHHHHHHH-CCeEEeecCCCEEEEECCcccCHHHHHHHHHHHHHHHHh
Confidence 444431000 0222223 456666654 3443 445555 699999865 88764 35889999999999999876
Q ss_pred h
Q 015435 406 M 406 (407)
Q Consensus 406 ~ 406 (407)
+
T Consensus 395 ~ 395 (396)
T PRK02627 395 L 395 (396)
T ss_pred h
Confidence 4
No 117
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.96 E-value=3.3e-28 Score=232.04 Aligned_cols=340 Identities=14% Similarity=0.083 Sum_probs=217.0
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC 106 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t 106 (407)
...+++++||..|....+.| ..++.+++++.+++. ...............++.+++++.. . .+++++ +
T Consensus 27 d~dG~~~lD~~~g~~~~~lG-h~~p~v~~a~~~~~~-~~~~~~~~~~~~~~~~la~~l~~~~-~-------~~~v~~--~ 94 (389)
T PRK01278 27 DEDGERYLDFASGIAVNSLG-HAHPHLVEALKEQAE-KLWHVSNLYRIPEQERLAERLVENS-F-------ADKVFF--T 94 (389)
T ss_pred ECCCCEEEECCccHhhccCC-CCCHHHHHHHHHHHH-hcCccccccCChHHHHHHHHHHhhC-C-------CCEEEE--c
Confidence 44678999999986655567 567788888888875 1111111111223344555555433 1 268999 9
Q ss_pred CCcccHHHHHHHHHHhh--cCCC----eEEecCCCCCChHHHHhhcCceeeEEEeec--CCCC----CcChhhHHHHHHc
Q 015435 107 LSGTGSLRVGAEFLARH--YHQL----TIYIPQPTWGNHPKVFTLAGLSVKTYRYYD--PATR----GLNFQGLLEDLRA 174 (407)
Q Consensus 107 ~g~t~a~~~~~~~~~~~--~~gd----~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~--~~~~----~~d~~~l~~~i~~ 174 (407)
+||++|++.+++++..+ .+|| +|++.+++|+++.......+......+... ..+. -.|++.+++.+.
T Consensus 95 ~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~- 173 (389)
T PRK01278 95 NSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAIT- 173 (389)
T ss_pred CCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhC-
Confidence 99999999998776543 3565 899999999998877765544332221100 0111 148899999886
Q ss_pred CCCCcEEEEecCCCCCCC-CCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCc
Q 015435 175 APSGAIVLLHACAHNPTG-VDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAK 253 (407)
Q Consensus 175 ~~~~~~v~i~~~p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 253 (407)
++++++++ ..++||+| .+++.+++++|+++|++||+++|+||+|.++.+.+. ......+ ....+ +.++||
T Consensus 174 -~~~~aviv-ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~---~~~~~~~-~~~pd---i~t~sK 244 (389)
T PRK01278 174 -PNTAAILI-EPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGK---LFAHEWA-GVTPD---IMAVAK 244 (389)
T ss_pred -CCeEEEEE-ecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc---ceeeccc-CCCCC---EEEEeh
Confidence 45677777 56688888 789999999999999999999999999998876542 1111111 11112 357999
Q ss_pred cccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHH
Q 015435 254 NMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLF 333 (407)
Q Consensus 254 ~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 333 (407)
.++ +|+|+||+ +++ +++.+.+.......+.+.+++.|.++.+.++... + ....++++++.+++.
T Consensus 245 ~l~-~G~~ig~~--~~~-----~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~------~--~~~~~~~~~~~~~l~ 308 (389)
T PRK01278 245 GIG-GGFPLGAC--LAT-----EEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVIL------A--PGFLDNVQRMGLYLK 308 (389)
T ss_pred hcc-CCcceEEE--EEc-----HHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHh------h--hHHHHHHHHHHHHHH
Confidence 999 89999999 576 4445545444444555788888888877775321 0 112233334444444
Q ss_pred HHHHhcC--CCCCcccccCCceeEEecCC--CHH-HHHHhHhhccEEEcCCC----eEEecC-CCCCChhHHHHHHHHHH
Q 015435 334 DALSARG--TPGDWSHIIKQIGMFTFTGL--NSE-QVAFMTKEYHIYMTSDG----RISMAG-LSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 334 ~~l~~~~--~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~l~~~gi~~~~gg----Ris~~~-~~~e~i~~~~~~l~~~l 403 (407)
+.++.+. .+..+....+ .|++.++.+ +.+ +..++++ +||.+.|++ ||+++. .+++++++++++|++++
T Consensus 309 ~~l~~l~~~~~~~~~~v~g-~G~~~~i~~~~~~~~~~~~l~~-~GV~~~p~~~~~lR~~p~~~~~~~~i~~~l~~l~~~l 386 (389)
T PRK01278 309 QKLEGLVDRFPDVIEEVRG-KGLLLGLKCVVPNRDLVQALRD-EGLLTVGAGDNVVRLLPPLIITEEEIDEALERLERAA 386 (389)
T ss_pred HHHHHHHhhCCCceeeEec-ccEEEEEEEecCHHHHHHHHHH-CCeEEeecCCCEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence 4444321 1101222333 445555433 333 4455555 599999875 887543 58899999999999998
Q ss_pred Hhh
Q 015435 404 TRM 406 (407)
Q Consensus 404 ~~~ 406 (407)
+++
T Consensus 387 ~~~ 389 (389)
T PRK01278 387 ESL 389 (389)
T ss_pred HhC
Confidence 764
No 118
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.96 E-value=1.3e-27 Score=229.05 Aligned_cols=334 Identities=14% Similarity=0.110 Sum_probs=215.8
Q ss_pred CCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccc-cccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSR-VKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
.++++|||+.|.+ -|.+.++.+.+++.+.+. .... ...|....|..++++++++++....+. +++|++ |+
T Consensus 40 ~g~~~i~l~~~~~---~~~~~~~~i~~a~~~~~~-~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~--ts 110 (397)
T PRK06939 40 DGKEVINFCANNY---LGLANHPELIAAAKAALD-SHGFGMASVRFICGTQDLHKELEEKLAKFLGT---EDAILY--SS 110 (397)
T ss_pred CCCeEEEeeccCc---cccCCCHHHHHHHHHHHH-HcCCCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEE--cC
Confidence 5788999999874 244556677777777665 1111 112223467777777777777443332 256766 77
Q ss_pred CcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC--C-CCcEEEEe
Q 015435 108 SGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA--P-SGAIVLLH 184 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~--~-~~~~v~i~ 184 (407)
| ++++..++ ...+.+||.|++++|+|+.+...+..+|.+++.++. .|++++++.+.+. + .+..++++
T Consensus 111 G-~~a~~~~~--~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~ 180 (397)
T PRK06939 111 C-FDANGGLF--ETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIAT 180 (397)
T ss_pred h-HHHHHHHH--HHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEE
Confidence 6 77888774 444789999999999999999999999998877754 4788888887631 1 12334444
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcce
Q 015435 185 ACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGA 264 (407)
Q Consensus 185 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 264 (407)
.+.+||||. .+++++|+++|++||++||+||+|...... .... ..........+..++++|+||.++ |+|+||
T Consensus 181 ~~v~~~~G~---~~~~~~l~~la~~~~~~li~De~~~~g~~~-~~~~-~~~~~~~~~~~~~i~~~S~sK~~~--g~r~G~ 253 (397)
T PRK06939 181 DGVFSMDGD---IAPLPEICDLADKYDALVMVDDSHAVGFVG-ENGR-GTVEHFGVMDRVDIITGTLGKALG--GASGGY 253 (397)
T ss_pred ecCcCCCCC---cCCHHHHHHHHHHhCCEEEEECcccccCcC-CCCC-CHHHHcCCCCCCcEEEEECHHHhC--ccCceE
Confidence 667899998 457899999999999999999999532221 1101 111111111235699999999984 569999
Q ss_pred eEEeecChhhHHHHHHHHhhhhhcc-cCCC-ChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 015435 265 LSIVCKTEDVASRVESQLKLVIRPM-YSSP-PIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTP 342 (407)
Q Consensus 265 ~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 342 (407)
+ +++ +++.+. +....... ..++ +...+.++..+++.. ...++.+++++++++++.+.|++.+
T Consensus 254 v--~~~-~~~~~~----l~~~~~~~~~~~~~~~~~~~a~~~al~~~-------~~~~~~~~~~~~~~~~l~~~L~~~~-- 317 (397)
T PRK06939 254 T--AGR-KEVIDW----LRQRSRPYLFSNSLAPAIVAASIKVLELL-------EESDELRDRLWENARYFREGMTAAG-- 317 (397)
T ss_pred E--EeC-HHHHHH----HHHhCccccccCCCCHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHHHcC--
Confidence 8 555 444443 33322211 1122 233334444333321 1124667889999999999998886
Q ss_pred CCcccccCCceeEEec-C--CCHH-HHHHhHhhccEEEcCC-------C----eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 343 GDWSHIIKQIGMFTFT-G--LNSE-QVAFMTKEYHIYMTSD-------G----RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 343 ~~~~~~~~~~~~~~~~-~--~~~~-~~~~~l~~~gi~~~~g-------g----Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
+....+.++++.+. + .+.+ ++..+++ +||.+.++ + |++++. .+++++++++++|+++++++
T Consensus 318 --~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 318 --FTLGPGEHPIIPVMLGDAKLAQEFADRLLE-EGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred --CCcCCCCCCEEEEEECCHHHHHHHHHHHHH-CCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 55555666666443 2 1233 3455555 59988642 1 887754 58899999999999999876
Q ss_pred C
Q 015435 407 G 407 (407)
Q Consensus 407 ~ 407 (407)
|
T Consensus 395 ~ 395 (397)
T PRK06939 395 G 395 (397)
T ss_pred C
Confidence 5
No 119
>PLN02822 serine palmitoyltransferase
Probab=99.96 E-value=1e-27 Score=232.31 Aligned_cols=332 Identities=14% Similarity=0.071 Sum_probs=224.5
Q ss_pred CCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccc----cccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ----SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
+++++|||++|.+ .+...++++.+++.+++.+-. .....|++..++.++++++++++ +. ++.|++
T Consensus 107 ~G~~~id~~s~~~---lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~-~~------~~~i~~- 175 (481)
T PLN02822 107 NGKDVVNFASANY---LGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFL-GT------PDSILY- 175 (481)
T ss_pred CCceEEEeECCCc---CCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHh-CC------CCEEEE-
Confidence 4688999999976 344567788888888886211 11123666777999999999999 42 367888
Q ss_pred ecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC----CCCcE
Q 015435 105 QCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA----PSGAI 180 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~----~~~~~ 180 (407)
++|++ ++..+ +...+++||.|++....|..+...+...|.+++.++.++.+ +++...+.+... ++++.
T Consensus 176 -s~G~~-a~~sa--i~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~----~l~~~l~~~~~~~~~~~~~~~ 247 (481)
T PLN02822 176 -SYGLS-TIFSV--IPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDME----SLRNTLEKLTAENKRKKKLRR 247 (481)
T ss_pred -CCHHH-HHHHH--HHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHH----HHHHHHHHHhhhhcccCCCcE
Confidence 87776 45555 34557799999988777777777888889999998774222 222222222211 22333
Q ss_pred EEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHH-HcCCcEEEEEecCccccccC
Q 015435 181 VLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFV-ADGGECLVAQSYAKNMGLYG 259 (407)
Q Consensus 181 v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G 259 (407)
++++..++|+||.+.+ +++|+++|++||++||+||+|....++....... ..+. ...+..+++.||||.+|++|
T Consensus 248 ~Ivve~i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~--e~~~v~~~~~dii~~s~sKalg~~G 322 (481)
T PLN02822 248 YIVVEAIYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLS--EHFGVPIEKIDIITAAMGHALATEG 322 (481)
T ss_pred EEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCChH--HHcCCCCCCCeEEEecchhhhhhCC
Confidence 4444888999999887 7888899999999999999998555442111111 1111 11245688999999999888
Q ss_pred CCcceeEEeecChhhHHHHHHHHhhhhhcccCC--CChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015435 260 ERVGALSIVCKTEDVASRVESQLKLVIRPMYSS--PPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALS 337 (407)
Q Consensus 260 ~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 337 (407)
||+ +++ ++ +.+.++......+++ .|+..+.++..+++.. +...+.+++++++++++.+.|+
T Consensus 323 ---G~i--~g~-~~----ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l-------~~~~~~~~~l~~~~~~l~~~L~ 385 (481)
T PLN02822 323 ---GFC--TGS-AR----VVDHQRLSSSGYVFSASLPPYLASAAITAIDVL-------EDNPSVLAKLKENIALLHKGLS 385 (481)
T ss_pred ---eEE--EcC-HH----HHHHHHhcCCceeeccccCHHHHHHHHHHHHHH-------HhCHHHHHHHHHHHHHHHHHHH
Confidence 888 454 44 444444333333333 3466667776666432 1124677889999999999998
Q ss_pred hc-CCCCCcccccCCceeEEecCCC-------------HHHHHHhHhhccEEEcCC------------C-eEEecC-CCC
Q 015435 338 AR-GTPGDWSHIIKQIGMFTFTGLN-------------SEQVAFMTKEYHIYMTSD------------G-RISMAG-LSS 389 (407)
Q Consensus 338 ~~-~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~gi~~~~g------------g-Ris~~~-~~~ 389 (407)
+. | +.+..+.++++.++.+. .+++.++++++||.+.++ . ||+++. +++
T Consensus 386 ~~~g----~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~ 461 (481)
T PLN02822 386 DIPG----LSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTE 461 (481)
T ss_pred hcCC----cccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCH
Confidence 86 4 66665566677666442 234667777789999864 1 887664 588
Q ss_pred CChhHHHHHHHHHHHh
Q 015435 390 KTVPHLTDAIHAAVTR 405 (407)
Q Consensus 390 e~i~~~~~~l~~~l~~ 405 (407)
++|++++++|+++++.
T Consensus 462 edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 462 SDILKASESLKRVAAS 477 (481)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998875
No 120
>PRK10534 L-threonine aldolase; Provisional
Probab=99.96 E-value=1.1e-27 Score=223.85 Aligned_cols=316 Identities=13% Similarity=0.060 Sum_probs=206.6
Q ss_pred eeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHH
Q 015435 34 LNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSL 113 (407)
Q Consensus 34 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~ 113 (407)
|||++.+ +|.|++.+.+++.... .....|+|.....+|++++++++ +. +.+++ ++||++++
T Consensus 2 ~~~~~~~------~~~p~~~~~~a~~~~~---~~~~~Y~~~~~~~~L~~~la~~~-g~-------~~~~v--~~~g~~a~ 62 (333)
T PRK10534 2 IDLRSDT------VTRPSRAMLEAMMAAP---VGDDVYGDDPTVNALQDYAAELS-GK-------EAALF--LPTGTQAN 62 (333)
T ss_pred ccccccc------CCCCCHHHHHHHHhcc---CCCcccCCCHHHHHHHHHHHHHh-CC-------CeEEE--eCchHHHH
Confidence 5677554 2556666655554443 23456888889999999999998 53 45677 88888888
Q ss_pred HHHHHHHHhhcCCCeEEecCCCCCC-hHHH-HhhcC-ceeeEEEeecCCCCCcChhhHHHHHHcCC----CCcEEEEecC
Q 015435 114 RVGAEFLARHYHQLTIYIPQPTWGN-HPKV-FTLAG-LSVKTYRYYDPATRGLNFQGLLEDLRAAP----SGAIVLLHAC 186 (407)
Q Consensus 114 ~~~~~~~~~~~~gd~Vi~~~p~y~~-~~~~-~~~~G-~~~~~v~~~~~~~~~~d~~~l~~~i~~~~----~~~~v~i~~~ 186 (407)
.+++ ...+.+||+|+++.|+|.. +... ....| .+++.++. ..++.+|++++++++.... +++++++ +|
T Consensus 63 ~~~l--~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l-~n 137 (333)
T PRK10534 63 LVAL--LSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDA--AADGTLPLDKVAAKIKPDDIHFARTRLLSL-EN 137 (333)
T ss_pred HHHH--HHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecC--CCCCCCCHHHHHHhhcccCcCcccceEEEE-ec
Confidence 7774 4457799999998888753 3221 23333 67777776 3357889999999886210 3566666 65
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeE
Q 015435 187 AHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALS 266 (407)
Q Consensus 187 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 266 (407)
| |||.+++.+++++|+++|++|+++|++||+|......... .....+....+.++ .||||.|+++ +||.
T Consensus 138 p--~~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~---~~~~~~~~~~~~~~--~s~SK~~~~~---~G~~- 206 (333)
T PRK10534 138 T--HNGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYG---CELKEITQYCDSFT--ICLSKGLGTP---VGSL- 206 (333)
T ss_pred C--CCCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcC---CCHHHHHhcCCEEE--EEeEcCCCCc---ccce-
Confidence 4 4699999999999999999999999999997622110000 01111222223333 4899988754 7853
Q ss_pred EeecChhhHHHHHHHHhhhhhcccCC--CChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 015435 267 IVCKTEDVASRVESQLKLVIRPMYSS--PPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGD 344 (407)
Q Consensus 267 ~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 344 (407)
++.++++.+ .+......+..+ .+.+.+.++...+++. .+..++..++++++.+.|++.|
T Consensus 207 -~~~~~~~i~----~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~----------~~~~~~~~~~r~~l~~~L~~~g---- 267 (333)
T PRK10534 207 -LVGNRDYIK----RARRWRKMTGGGMRQAGILAAAGLYALKHN----------VARLQEDHDNAAWLAEQLREAG---- 267 (333)
T ss_pred -EEcCHHHHH----HHHHHHHHhCCchhhHHHHHHHHHHHHHhh----------HHHHHHHHHHHHHHHHHHHhCC----
Confidence 244555444 444444332212 2234455544444321 1222234456789999999887
Q ss_pred cccccCCceeEEecCCC---HHHHHHhHhhccEEEcCCC--eEEec-CCCCCChhHHHHHHHHHHH
Q 015435 345 WSHIIKQIGMFTFTGLN---SEQVAFMTKEYHIYMTSDG--RISMA-GLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 345 ~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gi~~~~gg--Ris~~-~~~~e~i~~~~~~l~~~l~ 404 (407)
+.+.++ .+.|.|+.+. .+.+.++|.++||.+.++. |++.. .++++++++++++|++++.
T Consensus 268 ~~~~~~-~~nfv~~~~~~~~~~~~~~~l~~~gi~v~~~~~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 268 ADVMRQ-DTNMLFVRVGEEQAAALGEYMRERNVLINASPIVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred CccCCC-CceEEEEECCchhHHHHHHHHHHcCeeecCCceEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 666666 4668777653 4556778888999999986 88653 2588999999999998765
No 121
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.96 E-value=5.2e-27 Score=223.97 Aligned_cols=333 Identities=14% Similarity=0.120 Sum_probs=219.2
Q ss_pred CCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCC
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLS 108 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g 108 (407)
+++++|||+.|.+ .|.+.++.+.+++.+++.+.......|.+..|..++++.+++++....+. ++.+++ ++|
T Consensus 31 ~g~~~id~~~~~~---~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~~--~sG 102 (385)
T TIGR01825 31 NGKEVINLSSNNY---LGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALVF--QSG 102 (385)
T ss_pred CCceEEEeeccCc---cCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEEE--CcH
Confidence 4689999999863 35455667777777766511212345777789899999999888544332 245666 666
Q ss_pred cccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCC--CCcEEEEecC
Q 015435 109 GTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAP--SGAIVLLHAC 186 (407)
Q Consensus 109 ~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~--~~~~v~i~~~ 186 (407)
++++..++ ...+.+||.|++++|+|..+...+...|.++..++ .+|++++++.+.+.. +++++ ++++
T Consensus 103 -~~a~~~a~--~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v-~~~~ 171 (385)
T TIGR01825 103 -FNTNQGVL--SALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLI-VTDG 171 (385)
T ss_pred -HHHHHHHH--HHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEE-EEec
Confidence 66666663 44478999999999999999888888888776653 368888888876432 34555 4488
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeE
Q 015435 187 AHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALS 266 (407)
Q Consensus 187 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 266 (407)
++||||.+.+ +++|+++|++||+++|+||+|..+.++..... ....+.-..+.++++.||||.++++| ||+
T Consensus 172 v~~~tG~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~- 242 (385)
T TIGR01825 172 VFSMDGDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRG--TVHHFGLEDKVDIQVGTLSKAIGVVG---GYA- 242 (385)
T ss_pred CCcCCCCccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCc--cHhhcCCCcCCcEEEEeccHHhhcCC---CEE-
Confidence 8999999765 78888889999999999999977654311111 11111112467899999999998665 888
Q ss_pred EeecChhhHHHHHHHHhhhhh-cccC-CCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 015435 267 IVCKTEDVASRVESQLKLVIR-PMYS-SPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGD 344 (407)
Q Consensus 267 ~v~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 344 (407)
++ ++++.+. +..... .... ..++..+.++..+++... + ..+..++++++++++.+.|++.+
T Consensus 243 -~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~a~~~al~~~~------~-~~~~~~~~~~~~~~l~~~L~~~g---- 305 (385)
T TIGR01825 243 -AG-HKELIEY----LKNRARPFLFSTAQPPAVVAALAAAVDELQ------R-SPELMERLWDNTRFFKAGLGKLG---- 305 (385)
T ss_pred -ec-CHHHHHH----HHHhCccccccCCCCHHHHHHHHHHHHHHh------c-CHHHHHHHHHHHHHHHHHHHHcC----
Confidence 34 4444443 332222 1112 234555666666554221 1 12345667778999999998887
Q ss_pred cccccCCceeEEec-CC--CH-HHHHHhHhhccEEEcCC-------C----eEEec-CCCCCChhHHHHHHHHHHHhhC
Q 015435 345 WSHIIKQIGMFTFT-GL--NS-EQVAFMTKEYHIYMTSD-------G----RISMA-GLSSKTVPHLTDAIHAAVTRMG 407 (407)
Q Consensus 345 ~~~~~~~~~~~~~~-~~--~~-~~~~~~l~~~gi~~~~g-------g----Ris~~-~~~~e~i~~~~~~l~~~l~~~~ 407 (407)
+++..+.+.++.+. +. +. ++...+++ +||.+.++ | |+++. ..+++++++++++|+++++.+|
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 383 (385)
T TIGR01825 306 YDTGGSETPITPVVIGDEKAAQEFSRRLFD-EGIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKELG 383 (385)
T ss_pred CCCCCCCCCEEEEEECCHHHHHHHHHHHHH-CCcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHHhC
Confidence 56555655544433 21 22 33455555 59988531 2 66654 2588999999999999998764
No 122
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.96 E-value=3.7e-27 Score=223.04 Aligned_cols=323 Identities=14% Similarity=0.068 Sum_probs=210.1
Q ss_pred CCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCC----CCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYL----PIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~----~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
.+.++|||+.|.+ .|.+.++++++++.+.+.........|. ......++++++++++ +. ++++++
T Consensus 14 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-~~------~~~i~~- 82 (360)
T TIGR00858 14 DGRRLLNFSSNDY---LGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWK-GT------EAALLF- 82 (360)
T ss_pred CCceEEecccCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHh-CC------CCEEEE-
Confidence 5689999999953 5644566777777776651111111121 1223566888888887 42 256666
Q ss_pred ecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCC--CCcEEE
Q 015435 105 QCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAP--SGAIVL 182 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~--~~~~v~ 182 (407)
++| ++++..++ ...+.+||.|++++|+|..+...++..|.+++.++. +|++++++.+.+.. ++.+++
T Consensus 83 -~~G-~~~~~~~l--~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~ 151 (360)
T TIGR00858 83 -SSG-YLANVGVI--SALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIV 151 (360)
T ss_pred -Cch-HHHHHHHH--HHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEE
Confidence 666 45554443 334679999999999999999999999999887753 58889999887432 344444
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCc
Q 015435 183 LHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERV 262 (407)
Q Consensus 183 i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 262 (407)
+++++||||... ++++|.++|+++|+++|+||+|..+.++........... ....+++++++||||.++++|
T Consensus 152 -~~~~~~~~G~~~---~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~~~i~i~s~sK~~~~~g--- 223 (360)
T TIGR00858 152 -TDGVFSMDGDIA---PLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFG-LKPEPVDIQVGTLSKALGSYG--- 223 (360)
T ss_pred -EeCCccCCCCCc---CHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcC-CCccCCcEEEEechhhhhccC---
Confidence 488999999865 478888889999999999999976554321111111110 112367899999999998766
Q ss_pred ceeEEeecChhhHHHHHHHHhhhhhcc--cCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015435 263 GALSIVCKTEDVASRVESQLKLVIRPM--YSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARG 340 (407)
Q Consensus 263 G~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 340 (407)
||+ +++ +++.+. +....... ..+++...+.++..+++.. ...++.+++++++++++.+.|++.+
T Consensus 224 G~~--~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~a~~~al~~~-------~~~~~~~~~~~~~~~~l~~~L~~~~ 289 (360)
T TIGR00858 224 AYV--AGS-QALIDY----LINRARTLIFSTALPPAVAAAALAALELI-------QEEPWRREKLLALIARLRAGLEALG 289 (360)
T ss_pred cEE--EcC-HHHHHH----HHHhCccceecCCCCHHHHHHHHHHHHHH-------hhCHHHHHHHHHHHHHHHHHHHHcC
Confidence 888 454 443333 33222221 1234444444555555322 1234567899999999999999876
Q ss_pred CCCCcccccCCceeEEecCCC----HHHHHHhHhhccEEEcCC-------C----eEEecC-CCCCChhHHHHHHH
Q 015435 341 TPGDWSHIIKQIGMFTFTGLN----SEQVAFMTKEYHIYMTSD-------G----RISMAG-LSSKTVPHLTDAIH 400 (407)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gi~~~~g-------g----Ris~~~-~~~e~i~~~~~~l~ 400 (407)
+.+..+ ++.+.|+.+. ...+.+.|.++||.+.++ | ||+++. .+++++++++++|+
T Consensus 290 ----~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 290 ----FTLMPS-CTPIVPVIIGDNASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred ----CccCCC-CCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 555544 4445655442 334445556689999641 2 898874 47899999988763
No 123
>PLN02721 threonine aldolase
Probab=99.96 E-value=4.5e-27 Score=221.82 Aligned_cols=327 Identities=14% Similarity=0.148 Sum_probs=207.7
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcc
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGT 110 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t 110 (407)
..+++|+.+.+ +.|.+.+.+++.... .......|. ....++++++++++ +. +.+++ +++|+
T Consensus 5 ~~~~~~~~~~~------~~~~~~~~~a~~~~~-~~~~~~~~~--~~~~~l~~~la~~~-~~-------~~~~~--~~~Gs 65 (353)
T PLN02721 5 SRVVDLRSDTV------TKPTDAMRAAMANAE-VDDDVLGYD--PTALRLEEEMAKIF-GK-------EAALF--VPSGT 65 (353)
T ss_pred hhhhhhhcccc------cCCCHHHHHHHHhcc-CCCcccCCC--HHHHHHHHHHHHHh-CC-------ceeEE--ecCcc
Confidence 36788998875 234444444444321 112223333 33789999999999 53 34667 77788
Q ss_pred cHHHHHHHHHHhhc-CCCeEEecCCCCCChHH---HHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC-----CCCcEE
Q 015435 111 GSLRVGAEFLARHY-HQLTIYIPQPTWGNHPK---VFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA-----PSGAIV 181 (407)
Q Consensus 111 ~a~~~~~~~~~~~~-~gd~Vi~~~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~-----~~~~~v 181 (407)
+++.++ +...+. +||+|++++|+|..... .....|.+++.+|. ++++.+|++++++.+.+. ++++++
T Consensus 66 ~a~~~~--l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~~~~~~~v 141 (353)
T PLN02721 66 MGNLIS--VLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKN--NEDGTMDLDAIEAAIRPKGDDHFPTTRLI 141 (353)
T ss_pred HHHHHH--HHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCC--CcCCCcCHHHHHHHHHhccCCCCCcceEE
Confidence 887655 333455 89999999999865544 56788999999987 334678999999999742 356777
Q ss_pred EEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCC
Q 015435 182 LLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGER 261 (407)
Q Consensus 182 ~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 261 (407)
++.+.++||||++++.+++++|+++|++||+++|+|++|...... . .......+....+ .++.|+||.++. +
T Consensus 142 ~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~-~--~~~~~~~~~~~~d--~~~~s~sK~l~~---~ 213 (353)
T PLN02721 142 CLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASV-A--LGVPVHRLVKAAD--SVSVCLSKGLGA---P 213 (353)
T ss_pred EEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchh-h--hCCCHHHHhhhCC--EEEEecccccCC---c
Confidence 775667899999999999999999999999999999997522210 0 0011111222223 445579998873 3
Q ss_pred cceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015435 262 VGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGT 341 (407)
Q Consensus 262 ~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 341 (407)
+|++ +..++++.+.+. .........+...++.++..+.. +.+..+.. ++..++++.+.+.|++++.
T Consensus 214 ~G~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-------l~~~~~~~-~~~~~~~~~l~~~L~~~~~ 279 (353)
T PLN02721 214 VGSV--IVGSKSFIRKAK----RLRKTLGGGMRQVGVLAAAALVA-------LQENVPKL-EDDHKKAKLLAEGLNQIKG 279 (353)
T ss_pred eeeE--EecCHHHHHhHH----HHHHhcCCCeehhHHHHHHHHHH-------HHHHHHHH-HHHHHHHHHHHHHHHhCCC
Confidence 6774 355665544432 22222222222222222221111 11222322 3335667889999988742
Q ss_pred CCCcc--cccCCceeEEecCC------CHHHHHHhHhhccEEEcCCC----eEEec-CCCCCChhHHHHHHHHHHHhh
Q 015435 342 PGDWS--HIIKQIGMFTFTGL------NSEQVAFMTKEYHIYMTSDG----RISMA-GLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 342 ~~~~~--~~~~~~~~~~~~~~------~~~~~~~~l~~~gi~~~~gg----Ris~~-~~~~e~i~~~~~~l~~~l~~~ 406 (407)
+. ...+.++ +.|+.+ +.+.+.+.|.++||.+.+++ |++++ ..+++++++++++|+++++.+
T Consensus 280 ---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~~~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (353)
T PLN02721 280 ---LRVNVAAVETN-IVYFDITDGSRITAEKLCKSLEEHGVLLMPGNSSRIRVVTHHQISDSDVQYTLSCFQQAALTL 353 (353)
T ss_pred ---cEEecCCccce-EEEEEccCCccccHHHHHHHHHhCCcEEecCCCceEEEEecCcCCHHHHHHHHHHHHHHhhcC
Confidence 42 3344444 455433 34556655667999999986 99886 358899999999999988653
No 124
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=3.6e-27 Score=225.70 Aligned_cols=333 Identities=16% Similarity=0.144 Sum_probs=221.4
Q ss_pred cCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 28 DTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 28 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
..++++|||..|.+..+.| +.++.+++++.+++.+.......|.... ..++.+.+++++ +.. ..+++++ ++
T Consensus 40 ~dg~~~lD~~s~~~~~~lG-~~~p~v~~ai~~~~~~~~~~~~~~~~~~-~~~la~~l~~~~-~~~----~~~~v~~--~~ 110 (398)
T PRK03244 40 VDGKEYLDLLGGIAVNALG-HAHPAVVEAVTRQLATLGHVSNLFATEP-QIALAERLVELL-GAP----EGGRVFF--CN 110 (398)
T ss_pred CCCCEEEECCcCHhhccCC-CCCHHHHHHHHHHHHhccCccCccCCHH-HHHHHHHHHHhC-CCC----CCCEEEE--eC
Confidence 3578999999987655566 5456777777776651111123354322 346677777665 321 1368999 99
Q ss_pred CcccHHHHHHHHHHhhcCC-CeEEecCCCCCChHHHHhh-cCc------------eeeEEEeecCCCCCcChhhHHHHHH
Q 015435 108 SGTGSLRVGAEFLARHYHQ-LTIYIPQPTWGNHPKVFTL-AGL------------SVKTYRYYDPATRGLNFQGLLEDLR 173 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~~g-d~Vi~~~p~y~~~~~~~~~-~G~------------~~~~v~~~~~~~~~~d~~~l~~~i~ 173 (407)
||+++++.++++... .| +.|+..+++|+++...... .|. ++..+|. .|++.+++.+.
T Consensus 111 sgsea~~~al~~~~~--~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~ 181 (398)
T PRK03244 111 SGAEANEAAFKLARL--TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDALAAAVD 181 (398)
T ss_pred chHHHHHHHHHHHHH--HCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHHHHHhhc
Confidence 999999999776644 44 5677778899877554332 221 2222221 37888988875
Q ss_pred cCCCCcEEEEecCCCCCCCCCCCHHH-HHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecC
Q 015435 174 AAPSGAIVLLHACAHNPTGVDPTLEQ-WEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYA 252 (407)
Q Consensus 174 ~~~~~~~v~i~~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 252 (407)
++.+++++ .+++||||.++++++ +++|.++|++||+++|+||+|.+|+..+ ..+..... ....++ .+||
T Consensus 182 --~~~~avii-ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g---~~~~~~~~-~~~pDi---~t~s 251 (398)
T PRK03244 182 --DDTAAVFL-EPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTG---AWFAHQHD-GVTPDV---VTLA 251 (398)
T ss_pred --CCeEEEEE-ecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccc---hHHhhhhh-CCCCCE---EEEc
Confidence 45666666 778999999986654 9999999999999999999999887654 22221111 112232 3789
Q ss_pred ccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHH
Q 015435 253 KNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQL 332 (407)
Q Consensus 253 K~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 332 (407)
|.++ +|+|+||+ +++ +++.+.+.......+++.+++++.++.+.|+... -+...++++++++++
T Consensus 252 K~l~-~G~~ig~~--~~~-----~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~--------~~~~~~~~~~~~~~l 315 (398)
T PRK03244 252 KGLG-GGLPIGAC--LAF-----GPAADLLTPGLHGSTFGGNPVACAAALAVLDTIA--------SEGLLENAERLGEQL 315 (398)
T ss_pred hhhh-CCcccEEE--EEc-----HHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHH--------hccHHHHHHHHHHHH
Confidence 9999 89999999 566 3344444433333455778888998888876321 124456777788889
Q ss_pred HHHHHhcCCCCCcccccCCceeEEecCCC---HHHHHHhHhhccEEEcCCC----eEEecC-CCCCChhHHHHHHHHHHH
Q 015435 333 FDALSARGTPGDWSHIIKQIGMFTFTGLN---SEQVAFMTKEYHIYMTSDG----RISMAG-LSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 333 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gi~~~~gg----Ris~~~-~~~e~i~~~~~~l~~~l~ 404 (407)
.+.|++++.+. +.... ..|.+.|+.+. ...+.+.+.++||.+.+.+ |+++.. .+++|+++++++|+++++
T Consensus 316 ~~~L~~~~~~~-~~~v~-g~g~~~~i~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~ 393 (398)
T PRK03244 316 RAGIEALGHPL-VDHVR-GRGLLLGIVLTAPVAKAVEAAAREAGFLVNAVAPDVIRLAPPLIITDAQVDAFVAALPAILD 393 (398)
T ss_pred HHHHHhcCCCc-eeeEe-eccEEEEEEEeccHHHHHHHHHHHCCeEEeecCCCEEEEECCCcCCHHHHHHHHHHHHHHHH
Confidence 99998865321 11122 25566776553 3344555566899998754 888665 588999999999999987
Q ss_pred hh
Q 015435 405 RM 406 (407)
Q Consensus 405 ~~ 406 (407)
++
T Consensus 394 ~~ 395 (398)
T PRK03244 394 AA 395 (398)
T ss_pred hc
Confidence 64
No 125
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.96 E-value=2.6e-26 Score=220.42 Aligned_cols=329 Identities=15% Similarity=0.081 Sum_probs=212.8
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccc----c-ccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSR----V-KEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
+++.++|+...+ ++...++.+++++.+++. .... . ..|.......+|++++++++ +. ++.+++
T Consensus 45 ~~~~~~~~sn~y---l~l~~~p~v~~a~~~~~~-~~~~~~~~s~~~~~~~~~~~~Le~~la~~~-g~------~~~i~~- 112 (410)
T PRK13392 45 PRRVTIWCSNDY---LGMGQHPDVIGAMVDALD-RYGAGAGGTRNISGTSHPHVLLERELADLH-GK------ESALLF- 112 (410)
T ss_pred CceEEEEECCCc---cCCCCCHHHHHHHHHHHH-HcCCCCchhhhcccChHHHHHHHHHHHHHh-CC------CCEEEE-
Confidence 356889988776 454456677777777665 1111 1 11222234778999999988 43 244555
Q ss_pred ecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC--CCCcEEE
Q 015435 105 QCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA--PSGAIVL 182 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~--~~~~~v~ 182 (407)
++ |++++..++..+....+||.|+++.+.|..+...++..|.++..++. .|.+.+++.+... +++++++
T Consensus 113 -~s-G~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~t~~v~ 183 (410)
T PRK13392 113 -TS-GYVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRH-------NDLADLEEQLASVDPDRPKLIA 183 (410)
T ss_pred -Cc-HHHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC-------CCHHHHHHHHHhccCCCCEEEE
Confidence 54 56777766433322347888888777777777778888988877643 1455566655432 3455655
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcC-CcEEEEEecCccccccCCC
Q 015435 183 LHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADG-GECLVAQSYAKNMGLYGER 261 (407)
Q Consensus 183 i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~sK~~~~~G~r 261 (407)
+ ++|+||||.+.+ +++|.++|++||+++|+||+|....++.. . .++....... ...++++|+||.||++|
T Consensus 184 i-~~~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~-g--~g~~~~~~~~~~~div~~tlsK~~g~~G-- 254 (410)
T PRK13392 184 F-ESVYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGAR-G--GGIAERDGLMDRIDMIQGTLAKAFGCLG-- 254 (410)
T ss_pred E-eCCCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCC-C--CchhhhccCCCCCcEEEEEChHhhhccc--
Confidence 5 999999999876 77888889999999999999984333211 1 1111111111 22488899999999887
Q ss_pred cceeEEeecChhhHHHHHHHHhhhhhcc--cCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015435 262 VGALSIVCKTEDVASRVESQLKLVIRPM--YSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSAR 339 (407)
Q Consensus 262 ~G~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 339 (407)
||+ ++ ++++.+ .+......+ +.+.++..+.++..+|+.. +.....++++.++++++.+.|++.
T Consensus 255 -G~~--~~-~~~~~~----~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~-------~~~~~~~~~~~~~~~~l~~~L~~~ 319 (410)
T PRK13392 255 -GYI--AA-SADLID----FVRSFAPGFIFTTALPPAVAAGATAAIRHL-------KTSQTERDAHQDRVAALKAKLNAN 319 (410)
T ss_pred -chh--hc-CHHHHH----HHHHhCcchhccCcCCHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHHHc
Confidence 888 34 454444 344333322 2234556677777777543 112345577888999999999988
Q ss_pred CCCCCcccccCCceeE-EecCCC--H-HHHHHhHhhccEEEcCC-------C----eEEecC-CCCCChhHHHHHHHHHH
Q 015435 340 GTPGDWSHIIKQIGMF-TFTGLN--S-EQVAFMTKEYHIYMTSD-------G----RISMAG-LSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 340 ~~~~~~~~~~~~~~~~-~~~~~~--~-~~~~~~l~~~gi~~~~g-------g----Ris~~~-~~~e~i~~~~~~l~~~l 403 (407)
| +.+..+.++++ .+++.. . +...++++++||.+.+. | ||++.. .+++|+++++++|++++
T Consensus 320 g----~~~~~~~~~~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~ 395 (410)
T PRK13392 320 G----IPVMPSPSHIVPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIW 395 (410)
T ss_pred C----CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 7 66666666665 344432 2 33445667789999753 2 888743 48899999999999998
Q ss_pred HhhC
Q 015435 404 TRMG 407 (407)
Q Consensus 404 ~~~~ 407 (407)
+++|
T Consensus 396 ~~~~ 399 (410)
T PRK13392 396 DRLE 399 (410)
T ss_pred HHcC
Confidence 8764
No 126
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.95 E-value=5.8e-26 Score=211.36 Aligned_cols=294 Identities=15% Similarity=0.131 Sum_probs=206.3
Q ss_pred cccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCC
Q 015435 48 PLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQL 127 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd 127 (407)
...+.++++..+.+. . .. ++..-+.++++.+++++ +. +++++++ ++||++++..++ ...+.+||
T Consensus 33 ~~~~~~~~~~~~~~~--~--~~--g~~~~~~~Le~~lA~~~-g~-----~~e~ilv--~~gg~~a~~~~~--~al~~~gd 96 (346)
T TIGR03576 33 AGGFKIDEEDLELLE--T--YV--GPAIFEEKVQELGREHL-GG-----PEEKILV--FNRTSSAILATI--LALEPPGR 96 (346)
T ss_pred CCChhHHHHHHHHHH--H--hc--CCHHHHHHHHHHHHHHc-CC-----CcceEEE--ECCHHHHHHHHH--HHhCCCCC
Confidence 345566677666664 1 11 22344677788888877 42 3589999 999999999984 55578999
Q ss_pred eEEec---CCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHH
Q 015435 128 TIYIP---QPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIR 204 (407)
Q Consensus 128 ~Vi~~---~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~ 204 (407)
.|+++ .|+|..+...++..|++++.+ .++++++. .++++++++ ++++|+|.+++.+++++|+
T Consensus 97 ~Vli~~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~----~~~~~lIii--tg~s~~G~v~~~~~L~~i~ 161 (346)
T TIGR03576 97 KVVHYLPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK----IDGTSLVVI--TGSTMDLKVVSEEDLKRVI 161 (346)
T ss_pred EEEECCCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh----CcCceEEEE--ECCCCCCcccCHHHHHHHH
Confidence 99975 479999999999999876332 13444322 134566666 3469999999999999999
Q ss_pred HHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhh
Q 015435 205 QLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKL 284 (407)
Q Consensus 205 ~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~ 284 (407)
++|++||+++|+||+|..+..+... . .+.. ... ..+++.|||| +++|+|+||+ +++ +.+++.+..
T Consensus 162 ~la~~~~~~livDEAy~~~~~~~~~-~-~~~~---~~~-~divv~s~SK--alaG~r~G~v--~~~-----~~li~~l~~ 226 (346)
T TIGR03576 162 KQAKSKEAIVLVDDASGARVRRLYG-Q-PPAL---DLG-ADLVVTSTDK--LMDGPRGGLL--AGR-----KELVDKIKS 226 (346)
T ss_pred HHHHHcCCEEEEECCccccccccCC-C-CCHH---HcC-CcEEEeccch--hccccceEEE--EeC-----HHHHHHHHH
Confidence 9999999999999999876532111 1 1111 112 2366789999 5689999999 465 445566666
Q ss_pred hhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCC---
Q 015435 285 VIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN--- 361 (407)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--- 361 (407)
..+.+.++.+++.+.++..+|+... .+..++.++++++++.+.++.+ .+.++.++ |.|++++
T Consensus 227 ~~~~~~~s~~~~~~~aa~~aL~~~~--------~~~~~~~l~~r~~~~~~~l~~~------~~~~~~~~-f~~~~~~~~~ 291 (346)
T TIGR03576 227 VGEQFGLEAQAPLLAAVVRALEEFE--------LSRIRDAFKRKEEVYLRLFDKL------NVERTPTG-FVIKGVEEEK 291 (346)
T ss_pred hhcCcccCccHHHHHHHHHHHhhcc--------HHHHHHHHHHHHHHHHHHHHhC------CCCcCCCe-EEEEeCCCCC
Confidence 6555555567778888888886431 2455677888888888877643 33334455 6777653
Q ss_pred -HHHHHHhHhhccEEEcCC-------C--eEEecCCCCC---ChhHHHHHHHHHH
Q 015435 362 -SEQVAFMTKEYHIYMTSD-------G--RISMAGLSSK---TVPHLTDAIHAAV 403 (407)
Q Consensus 362 -~~~~~~~l~~~gi~~~~g-------g--Ris~~~~~~e---~i~~~~~~l~~~l 403 (407)
.+++.++|+++||.+.|+ + ||+++. +++ +++.++++|++-+
T Consensus 292 ~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~-~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 292 LIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAA-KDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred HHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEec-ChHHhcCHHHHHHHHHhcc
Confidence 367889999999999984 2 999995 444 7999999998754
No 127
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.95 E-value=9.8e-26 Score=215.91 Aligned_cols=331 Identities=19% Similarity=0.129 Sum_probs=215.9
Q ss_pred CeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCC-------CCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 32 VKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPI-------VGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 32 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~-------~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
+.+.|..+. -+ +.|..++++..+.+. .......+.+. ..++++|+.+++++ +.. ++++|++
T Consensus 16 ~~iyld~a~----~~-~~p~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-g~~----~~~~i~~- 83 (398)
T TIGR03392 16 GTVYLDSAA----TA-LKPQAVIDATQQFYR-LSSGTVHRSQHQQAQSLTARYELARQQVARFL-NAP----DAENIVW- 83 (398)
T ss_pred CeEEeeCcc----cc-CCCHHHHHHHHHHHH-hcCCCCCCcccHHHHHHHHHHHHHHHHHHHHh-CCC----CCCeEEE-
Confidence 455565554 23 556677666666553 11111112111 23567899999988 432 2478999
Q ss_pred ecCCcccHHHHHHHHHH--hhcCCCeEEecCCCCCC----hHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCC
Q 015435 105 QCLSGTGSLRVGAEFLA--RHYHQLTIYIPQPTWGN----HPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSG 178 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~--~~~~gd~Vi~~~p~y~~----~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 178 (407)
|+|+|+++.+++..+. .+.+||+|++++|.|++ +...++..|++++.++.+ .++.+|++++++.+. +++
T Consensus 84 -t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~~~~~l~~~i~--~~t 158 (398)
T TIGR03392 84 -TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIG--ADLLPDIRQLPELLT--PRT 158 (398)
T ss_pred -eCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecC--CCCCcCHHHHHHHhc--cCc
Confidence 9999999999853332 14689999999999876 345567889999999983 345689999999987 567
Q ss_pred cEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCcccccc
Q 015435 179 AIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLY 258 (407)
Q Consensus 179 ~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 258 (407)
+++++ ++++||||.+.+ +++|+++|+++|+++++|++|...... . .+. ..+..+++.|++|.+|.+
T Consensus 159 ~lv~i-~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~~-~-----~~~----~~~~d~~~~s~~K~~gp~ 224 (398)
T TIGR03392 159 RILAL-GQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHGP-P-----DVQ----ALDIDFYAFSGHKLYGPT 224 (398)
T ss_pred eEEEE-ECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCCC-C-----Chh----hcCCCEEEEecccccCCC
Confidence 77766 899999999875 677888899999999999998643321 1 111 122357788889988866
Q ss_pred CCCcceeEEeecChhhHHHHHHHHhhh-----------------hhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHH
Q 015435 259 GERVGALSIVCKTEDVASRVESQLKLV-----------------IRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAM 321 (407)
Q Consensus 259 G~r~G~~~~v~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 321 (407)
| +|++ +.+ ++..+.+....... .+....+++..++.++..+++-.. ....++.
T Consensus 225 G--~G~l--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~-----~~g~~~i 294 (398)
T TIGR03392 225 G--IGVL--YGK-TELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLT-----DIDIAAA 294 (398)
T ss_pred c--eEEE--EEc-HHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHH-----HhCHHHH
Confidence 6 7998 455 33333221100000 011112344445555544443211 0124466
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCccccc-CCceeEEec--CCCHHHHHHhHhhccEEEcCC--------------C--eE
Q 015435 322 ADRIISMRQQLFDALSARGTPGDWSHII-KQIGMFTFT--GLNSEQVAFMTKEYHIYMTSD--------------G--RI 382 (407)
Q Consensus 322 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~l~~~gi~~~~g--------------g--Ri 382 (407)
+++.++.++++.+.+++++. +.... +..+++.|. +.+.+.+...|.++||.+.+| | |+
T Consensus 295 ~~~~~~l~~~l~~~l~~l~g---~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRv 371 (398)
T TIGR03392 295 EAWSVSLADLAEERLAQLPG---FRSFRCPGSSLLAFDFAGVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRA 371 (398)
T ss_pred HHHHHHHHHHHHHHHhcCCC---eEEeCCCCCcEEEEEeCCcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEE
Confidence 78888889999999987632 44332 334444432 455666666677799998753 2 99
Q ss_pred EecC-CCCCChhHHHHHHHHHHHhh
Q 015435 383 SMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 383 s~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
|++. .+++|++++++.|+++++.+
T Consensus 372 S~~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 372 SFAPYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred EeeccCCHHHHHHHHHHHHHHHHHh
Confidence 8865 47799999999999988764
No 128
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.95 E-value=2.9e-26 Score=218.97 Aligned_cols=327 Identities=16% Similarity=0.132 Sum_probs=211.2
Q ss_pred CCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCC----cHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVG----LVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g----~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
+++++|||+.|.+ .|.+.++.+++++.+.+.........|....| ..++++.+++++ +. ++.++
T Consensus 37 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-~~-------~~~i~- 104 (385)
T PRK05958 37 DGRRMLNFASNDY---LGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWF-GA-------ERALL- 104 (385)
T ss_pred CCceEEEeeCCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHh-CC-------CcEEE-
Confidence 6799999999853 35334566777777777511101111222223 566777777766 31 34444
Q ss_pred ecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEe
Q 015435 105 QCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLH 184 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~ 184 (407)
+++|++++..++ ...+.+||.|++++|+|+.+...+...|.+++.++. .|++++++.+...+++..++++
T Consensus 105 -~~~g~~~~~~~l--~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi~ 174 (385)
T PRK05958 105 -FSSGYAANLAVL--TALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIVT 174 (385)
T ss_pred -ECcHHHHHHHHH--HHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEEE
Confidence 555666666553 344789999999999999999998899999888764 3788999988743223555565
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcce
Q 015435 185 ACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGA 264 (407)
Q Consensus 185 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 264 (407)
++++||||... ++++|+++|++||+++|+||+|..+.++........... .....+++++.|+||.++++| ||
T Consensus 175 ~~~~~~~G~~~---~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G---g~ 247 (385)
T PRK05958 175 ESVFSMDGDLA---PLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAG-LAGEPDVILVGTLGKALGSSG---AA 247 (385)
T ss_pred EecccCCCCcC---CHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhC-CCCCCceEEEEechhhcccCC---cE
Confidence 88899999854 488899999999999999999965543311111111111 123457899999999998766 88
Q ss_pred eEEeecChhhHHHHHHHHhhhhhcc--cCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 015435 265 LSIVCKTEDVASRVESQLKLVIRPM--YSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTP 342 (407)
Q Consensus 265 ~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 342 (407)
+ +++ +++.+.+ ....+.. ..+++...+.++..+++... . .+++++++.++++++.+.|++.+
T Consensus 248 ~--~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~aa~~aal~~~~------~-~~~~~~~~~~~~~~l~~~L~~~~-- 311 (385)
T PRK05958 248 V--LGS-ETLIDYL----INRARPFIFTTALPPAQAAAARAALRILR------R-EPERRERLAALIARLRAGLRALG-- 311 (385)
T ss_pred E--EcC-HHHHHHH----HHhCccceecCCCCHHHHHHHHHHHHHHh------c-CHHHHHHHHHHHHHHHHHHHHcC--
Confidence 7 454 4444333 2221111 12344444445555554221 1 14567888999999999999887
Q ss_pred CCcccccCCceeEEecCC----CHHHHHHhHhhccEEEcCC-------C----eEEecC-CCCCChhHHHHHHHHHH
Q 015435 343 GDWSHIIKQIGMFTFTGL----NSEQVAFMTKEYHIYMTSD-------G----RISMAG-LSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gi~~~~g-------g----Ris~~~-~~~e~i~~~~~~l~~~l 403 (407)
+++..+.++++. +.+ +...+...|.++||.+.++ | ||+++. .++++++.++++|++++
T Consensus 312 --~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 312 --FQLMDSQSAIQP-LIVGDNERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred --CCcCCCCCCEEE-EEeCCHHHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 555666666544 333 2223444445679999752 2 999873 48899999999998763
No 129
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.95 E-value=8.8e-26 Score=200.91 Aligned_cols=315 Identities=17% Similarity=0.199 Sum_probs=207.4
Q ss_pred cccccC-CCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhh--c--CC----------CeEE
Q 015435 66 SRVKEY-LPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARH--Y--HQ----------LTIY 130 (407)
Q Consensus 66 ~~~~~y-~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~--~--~g----------d~Vi 130 (407)
.+..+| +...|+++.|+..++.+ + +++++|++ ||+.+++++..++... . .| -+.+
T Consensus 59 ~D~RNY~G~l~Gipe~r~l~a~ll-g-----v~~~~viv----~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfL 128 (425)
T PF12897_consen 59 TDCRNYPGGLDGIPEARELFAELL-G-----VPPENVIV----GGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFL 128 (425)
T ss_dssp EBTTSS-S-SS--HHHHHHHHHHH-T-----S-GGGEEE-----SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEE
T ss_pred ccccCCCCccCChHHHHHHHHHHh-C-----CCHHHEEE----eccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEE
Confidence 355789 88999999999999999 5 34588888 6677777765544321 1 11 2479
Q ss_pred ecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHH-HHH
Q 015435 131 IPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQL-MRS 209 (407)
Q Consensus 131 ~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~-~~~ 209 (407)
+|.|+|..|..+.+.+|++.+.||+. ..|+|.+.+++.+.+.+..+.+++++..+||||.++|.+..++|+++ +..
T Consensus 129 CPvPGYDRHFai~E~~Giemi~VpM~---~dGPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA 205 (425)
T PF12897_consen 129 CPVPGYDRHFAITEHFGIEMIPVPMT---EDGPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAA 205 (425)
T ss_dssp EEES--HHHHHHHHHCT-EEEEEEEE---TTEE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SS
T ss_pred ecCCCchHHHHHHHhhCcEEEecCCC---CCCCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCC
Confidence 99999999999999999999999995 25799999999998778889999999999999999999999999988 456
Q ss_pred cCceeeeccccccccC-CCCCchh-HHHHHHH---HcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhh
Q 015435 210 KGLLPFFDSAYQGFAS-GSLDADA-QSVRMFV---ADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKL 284 (407)
Q Consensus 210 ~~~~li~D~~y~~~~~-~~~~~~~-~~~~~~~---~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~ 284 (407)
.+..|+.|++|.-... ++.+... ..+.... ...++++.+.|.||.- .+|.+++++ +.+++..+.+.+.
T Consensus 206 ~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~---aaS~~Nl~~~~~~--- 278 (425)
T PF12897_consen 206 PDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFF---AASEANLAWIKKH--- 278 (425)
T ss_dssp TT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEE---EE-HHHHHHHHHH---
T ss_pred cCeEEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeee---ecCHHHHHHHHHH---
Confidence 7999999999976555 2221121 2333322 3458899999999974 599999998 5555555544443
Q ss_pred hhhcccCCCChhHHHHHHHHhcCh--hhHHhHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCCCcccccCCceeEEecCC-
Q 015435 285 VIRPMYSSPPIHGASIVATILKDS--TMYKEWTLELKAMADRIISMRQQLFDALS-ARGTPGDWSHIIKQIGMFTFTGL- 360 (407)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~~~~~~~~~~~~~~~- 360 (407)
....+.++..+.|..-.+++.+. .++.+++++.+-++-+...--+.|.+.|. ..+. .++..|.||||++++.
T Consensus 279 -~~~~tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~i---a~Wt~P~GGYFIsld~~ 354 (425)
T PF12897_consen 279 -LSVQTIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGI---ASWTKPKGGYFISLDVL 354 (425)
T ss_dssp -HHHH-S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTS---EEE---SBSS-EEEEES
T ss_pred -hcCceeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCe---eEecCCCCceEEEEecC
Confidence 34445689999999999999984 45566666666666666666667777776 5554 6899999999998743
Q ss_pred --CHHHHHHhHhhccEEEcCCC--------------eEEecCCCCCChhHHHHHHHHHHH
Q 015435 361 --NSEQVAFMTKEYHIYMTSDG--------------RISMAGLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 361 --~~~~~~~~l~~~gi~~~~gg--------------Ris~~~~~~e~i~~~~~~l~~~l~ 404 (407)
.+..+.+++++.||.++|.| ||+.+..+.||++.+++.+.-.++
T Consensus 355 ~G~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 355 DGTAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVK 414 (425)
T ss_dssp TT-HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 67778899999999999954 998887677999999998876553
No 130
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.95 E-value=1.1e-25 Score=215.66 Aligned_cols=292 Identities=20% Similarity=0.181 Sum_probs=200.4
Q ss_pred cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHH--hhcCCCeEEecCCCCCC----hHHHHhhcCcee
Q 015435 77 LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLA--RHYHQLTIYIPQPTWGN----HPKVFTLAGLSV 150 (407)
Q Consensus 77 ~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~--~~~~gd~Vi~~~p~y~~----~~~~~~~~G~~~ 150 (407)
++++|+.+++++ +.. ++++|++ |+|+|+++.+++..+. .+.+||+|+++++.|++ +....+..|+++
T Consensus 65 ~~~~r~~la~~~-g~~----~~~~i~~--~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v 137 (401)
T PRK10874 65 YEAAREQVAQLL-NAP----DAKNIVW--TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKV 137 (401)
T ss_pred HHHHHHHHHHHc-CCC----CCCEEEE--ECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEE
Confidence 678899999988 431 3589999 9999999999854432 24689999999999875 344557889999
Q ss_pred eEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCc
Q 015435 151 KTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDA 230 (407)
Q Consensus 151 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~ 230 (407)
+.++. +.++.+|++++++.+. ++++++++ ++|+||||.+.+ +++|+++|+++|+++|+|++|+..... .
T Consensus 138 ~~v~~--~~~~~~d~~~l~~~i~--~~t~lv~i-~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~~-~-- 206 (401)
T PRK10874 138 VKLPL--GADRLPDVDLLPELIT--PRTRILAL-GQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHFP-A-- 206 (401)
T ss_pred EEEec--CCCCcCCHHHHHHhcC--cCcEEEEE-eCCcccccCcCC---HHHHHHHHHHcCCEEEEECCccccccc-C--
Confidence 99998 3356789999999997 66777777 999999999875 678888899999999999998533221 1
Q ss_pred hhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhh-----------------hhhcccCCC
Q 015435 231 DAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKL-----------------VIRPMYSSP 293 (407)
Q Consensus 231 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~-----------------~~~~~~~~~ 293 (407)
+ +. ..+..+++.|++|.+|.+| +|++ +.+ ++..+.+...... ..+....++
T Consensus 207 ~---~~----~~~~d~~~~s~~K~~gp~G--~G~l--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~ 274 (401)
T PRK10874 207 D---VQ----ALDIDFYAFSGHKLYGPTG--IGVL--YGK-SELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTP 274 (401)
T ss_pred C---ch----hcCCCEEEEecccccCCCc--cEEE--EEc-hHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCc
Confidence 1 11 1234577899999888766 5888 444 4433332110000 001111244
Q ss_pred ChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc-CCceeEEec--CCCHHHHHHhHh
Q 015435 294 PIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHII-KQIGMFTFT--GLNSEQVAFMTK 370 (407)
Q Consensus 294 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~l~ 370 (407)
+..++.++..+++-.. ....++.+++.++.++++.+.|+++.. +.... +.++++.|. +++.+.+.+.|.
T Consensus 275 ~~~~~~al~~al~~l~-----~~g~~~~~~~~~~l~~~l~~~l~~~~g---~~~~~~~~~~i~~~~~~~~~~~~~~~~L~ 346 (401)
T PRK10874 275 NVAGVIGLSAALEWLA-----DIDINQAESWSRSLATLAEDALAKLPG---FRSFRCQDSSLLAFDFAGVHHSDLVTLLA 346 (401)
T ss_pred CHHHHHHHHHHHHHHH-----HhCHHHHHHHHHHHHHHHHHHHhcCCC---EEEeCCCCCcEEEEEECCcCHHHHHHHHH
Confidence 5555555555553211 012345678888889999999987632 44443 344443332 455666667777
Q ss_pred hccEEEcCC--------------C--eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 371 EYHIYMTSD--------------G--RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 371 ~~gi~~~~g--------------g--Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
++||.+.+| | |||++. .+++|++++++.|+++++.+
T Consensus 347 ~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 347 EYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred HCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHHh
Confidence 799998762 2 999875 47799999999999988754
No 131
>PLN02483 serine palmitoyltransferase
Probab=99.95 E-value=7.8e-26 Score=219.73 Aligned_cols=332 Identities=13% Similarity=0.047 Sum_probs=209.8
Q ss_pred CCCCeeeeeeeeeecCCCcccc-chhHHHHHHHHhccc----cccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEE
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLV-LNVVRKAEQLLVNDQ----SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTT 103 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~ 103 (407)
..++.+||++-.+ .|...+ +...+++.+++.+-. .....|++..++.++++++|+++ +. ++.+++
T Consensus 98 ~~~~~~n~~s~~Y---Lgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~-g~------~~ai~~ 167 (489)
T PLN02483 98 KTRRCLNLGSYNY---LGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFV-GK------PAAIVF 167 (489)
T ss_pred CCceEEEeecCCc---cCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHh-CC------CcEEEE
Confidence 3578899998887 454432 233344444443111 22334777788999999999999 53 255665
Q ss_pred eecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC-----C--
Q 015435 104 VQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA-----P-- 176 (407)
Q Consensus 104 ~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~-----~-- 176 (407)
++| ..++..+ +...+.+||.|++++|+|..+...++..|++++.++.. |++++++.+.+. +
T Consensus 168 --~~G-~~an~~~--i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t 235 (489)
T PLN02483 168 --GMG-YATNSTI--IPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRT 235 (489)
T ss_pred --CCH-HHHHHHH--HHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhcccccc
Confidence 554 4444444 34457899999999999999999999999999999863 345555544321 2
Q ss_pred ---CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHH-HcCCcEEEEEecC
Q 015435 177 ---SGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFV-ADGGECLVAQSYA 252 (407)
Q Consensus 177 ---~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~s 252 (407)
.+++++++....|++|.+. ++++|+++|++||++||+||+|+....+ ..... ....+. ...+..|+++|||
T Consensus 236 ~~p~~k~livve~v~s~~G~~~---~l~~I~~la~~~~~~livDEa~s~g~~G-~~G~g-~~~~~~v~~~~~dI~~~SfS 310 (489)
T PLN02483 236 HRPWKKIIVIVEGIYSMEGELC---KLPEIVAVCKKYKAYVYLDEAHSIGAVG-KTGRG-VCELLGVDPADVDIMMGTFT 310 (489)
T ss_pred ccCCceEEEEECCCCCCCCccc---CHHHHHHHHHHcCCEEEEECcCccCccC-CCCCc-hHHhcCCCcccCcEEEEecc
Confidence 2245566466678999854 6888899999999999999998743322 11111 111111 1235679999999
Q ss_pred ccccccCCCcceeEEeecChhhHHHHHHHHhhhhhc--ccCCCChhHHHHHHHHhc---ChhhHHhHHHHHHHHHHHHHH
Q 015435 253 KNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRP--MYSSPPIHGASIVATILK---DSTMYKEWTLELKAMADRIIS 327 (407)
Q Consensus 253 K~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~ 327 (407)
|.+|++| ||+ +++ ++ +.+.+...... ...+.++....++...++ ..+. .+...+.++++++
T Consensus 311 Ks~g~~G---G~i--~~~-~~----li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g----~~~~~~~~~~l~~ 376 (489)
T PLN02483 311 KSFGSCG---GYI--AGS-KE----LIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDG----TNRGAQKLAQIRE 376 (489)
T ss_pred hhcccCc---eEE--EcC-HH----HHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCcc----ccchHHHHHHHHH
Confidence 9999876 888 444 44 44444433221 111223233333333332 1100 0223455788999
Q ss_pred HHHHHHHHHHhcCCCCCcccccCCceeEEec--C--CCH-HHHHHhHhhccEEEcCC---------C--eEEecC-CCCC
Q 015435 328 MRQQLFDALSARGTPGDWSHIIKQIGMFTFT--G--LNS-EQVAFMTKEYHIYMTSD---------G--RISMAG-LSSK 390 (407)
Q Consensus 328 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~--~--~~~-~~~~~~l~~~gi~~~~g---------g--Ris~~~-~~~e 390 (407)
+++++.+.|++.| +.+..+.++...++ . ... ++...+++ +||.+.+. + ||+++. +++|
T Consensus 377 ~~~~l~~~L~~~G----~~v~~~~~sp~~~l~l~~~~~~~~~~~~Ll~-~GI~v~~~~fp~~p~~~~~vRi~isa~~t~e 451 (489)
T PLN02483 377 NSNFFRSELQKMG----FEVLGDNDSPVMPIMLYNPAKIPAFSRECLK-QNVAVVVVGFPATPLLLARARICISASHSRE 451 (489)
T ss_pred HHHHHHHHHHHCC----CcccCCCCCCEEEEEECCHHHHHHHHHHHHH-CCcEEeeeCCCCCCCCCceEEEEeCCCCCHH
Confidence 9999999999987 55544333333332 1 122 34555555 79988742 1 888875 5889
Q ss_pred ChhHHHHHHHHHHHhh
Q 015435 391 TVPHLTDAIHAAVTRM 406 (407)
Q Consensus 391 ~i~~~~~~l~~~l~~~ 406 (407)
++++++++|+++++.+
T Consensus 452 dId~~l~~L~~~~~~~ 467 (489)
T PLN02483 452 DLIKALEVISEVGDLV 467 (489)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999988765
No 132
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=7.4e-27 Score=195.58 Aligned_cols=277 Identities=17% Similarity=0.166 Sum_probs=215.8
Q ss_pred CCCCCCceEEeecCCcccHHHHHHHHHHhhcCC-CeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHH
Q 015435 94 PAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQ-LTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDL 172 (407)
Q Consensus 94 ~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~g-d~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i 172 (407)
-++.+++|.+ .-|+-+.+.++++. .+.|| ++|++-.|+|..|.-.+...++.++.+|++ + .+.+|.+.+.+.+
T Consensus 82 kpLt~dnic~--GvGsDE~ID~iiR~--~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~-p-dF~lnvdai~evl 155 (375)
T KOG0633|consen 82 KPLTSDNICV--GVGSDELIDLIIRC--VCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLN-P-DFSLNVDAIAEVL 155 (375)
T ss_pred CCCCccceEE--ecCcHHHHHHHHhh--eecCCccceeecCCcceeEEEEeecCCceEEEecCC-C-CccccHHHHHHHH
Confidence 3467899999 99999999998533 37799 789999999999988888999999999993 4 6899999999999
Q ss_pred HcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecC
Q 015435 173 RAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYA 252 (407)
Q Consensus 173 ~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 252 (407)
+.....+++++ ++|+||||..++.+++.+|.+.=. +.++++||+|-+|...+. -..+.....+.+++.++|
T Consensus 156 ~~ds~iK~~F~-tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYidFsg~~S------~~~lV~kYpNLivlqTlS 226 (375)
T KOG0633|consen 156 ELDSKIKCIFL-TSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYIDFSGVES------RMKLVKKYPNLIVLQTLS 226 (375)
T ss_pred hccccceEEEE-cCCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEeeccccc------cchHhHhCCceeehhhhh
Confidence 86555677777 999999999999999999966554 679999999999987432 122456678999999999
Q ss_pred ccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHH
Q 015435 253 KNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQL 332 (407)
Q Consensus 253 K~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 332 (407)
|.||++|+|+|+- .++ ..+...+.....++ +.+..+..++++++++... +.++..++.+.+.+..|
T Consensus 227 KsfGLAGiRvG~~--~~~-----~~ia~iln~~KaPY--NiS~~~s~~AL~Als~~n~-----kkme~~rdaiv~er~RL 292 (375)
T KOG0633|consen 227 KSFGLAGIRVGYG--AFP-----LSIAEILNRAKAPY--NISVAGSVAALAALSDSNG-----KKMEDVRDAIVRERERL 292 (375)
T ss_pred hhcCcceeEeecc--ccc-----HHHHHHHHhccCCc--cccchhHHHHHHhcCcccc-----hHHHHHHHHHHHHHHHH
Confidence 9999999999998 466 55666666666544 7777778888888986542 56778888888899999
Q ss_pred HHHHHhcCCCCCcccccCCceeEEecC-------CCHHHHHHhHhhccEEEcCC-------C--eEEecCCCCCChhHHH
Q 015435 333 FDALSARGTPGDWSHIIKQIGMFTFTG-------LNSEQVAFMTKEYHIYMTSD-------G--RISMAGLSSKTVPHLT 396 (407)
Q Consensus 333 ~~~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~gi~~~~g-------g--Ris~~~~~~e~i~~~~ 396 (407)
.+.|.+++.-. ++..+.-..|..+. ++.....+++.++||.++-- | ||+.+ ++|+...++
T Consensus 293 ~keLt~v~~~~--~~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvG--t~EentvL~ 368 (375)
T KOG0633|consen 293 FKELTEVPFLN--DYPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVG--TPEENTVLM 368 (375)
T ss_pred HHHhhcCcccc--CCCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcC--CcccchHHH
Confidence 99999886411 22333333344442 24455677888899998643 2 99998 678888999
Q ss_pred HHHHHHH
Q 015435 397 DAIHAAV 403 (407)
Q Consensus 397 ~~l~~~l 403 (407)
+.+++++
T Consensus 369 k~~K~~l 375 (375)
T KOG0633|consen 369 KCLKQFL 375 (375)
T ss_pred HHHHhhC
Confidence 9988763
No 133
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.95 E-value=3.4e-26 Score=218.89 Aligned_cols=333 Identities=12% Similarity=0.112 Sum_probs=216.8
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC 106 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t 106 (407)
...+.++|||..|....+.| ..++.+.+++.+++. ............-..++.+.+++.. + .+.+++ +
T Consensus 36 d~dG~~~iD~~~~~~~~~lG-h~~p~v~~a~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~-~-------~~~~~~--~ 103 (403)
T PRK05093 36 DQQGKEYIDFAGGIAVTALG-HCHPALVKALKEQGE-KLWHISNVFTNEPALRLAKKLIDAT-F-------AERVFF--A 103 (403)
T ss_pred eCCCCEEEEcCcCHHhccCC-CCCHHHHHHHHHHHH-hcCcccCccCCHHHHHHHHHHHhhC-C-------CCEEEE--e
Confidence 34578999998885444577 567778888877775 1111111111112335555555543 2 168999 9
Q ss_pred CCcccHHHHHHHHHHhhc------CCCeEEecCCCCCChHHHHhhc-C------------ceeeEEEeecCCCCCcChhh
Q 015435 107 LSGTGSLRVGAEFLARHY------HQLTIYIPQPTWGNHPKVFTLA-G------------LSVKTYRYYDPATRGLNFQG 167 (407)
Q Consensus 107 ~g~t~a~~~~~~~~~~~~------~gd~Vi~~~p~y~~~~~~~~~~-G------------~~~~~v~~~~~~~~~~d~~~ 167 (407)
+||++|++.++++..... ..++|+..+-+|++........ | .+++.++. .|++.
T Consensus 104 ~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~ 176 (403)
T PRK05093 104 NSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-------NDLAA 176 (403)
T ss_pred CchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-------CCHHH
Confidence 999999999988765542 2357888888887764422111 1 11222221 27888
Q ss_pred HHHHHHcCCCCcEEEEecCCCCCCCCCC--CHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcE
Q 015435 168 LLEDLRAAPSGAIVLLHACAHNPTGVDP--TLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245 (407)
Q Consensus 168 l~~~i~~~~~~~~v~i~~~p~NPtG~~~--~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (407)
+++.+. ++++++++ . |.||+|.++ +.+.+++|+++|++||+++|+||+|.++.+.+. ..+...+ .....
T Consensus 177 l~~~l~--~~~aaiii-e-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~---~~~~~~~-~~~pd- 247 (403)
T PRK05093 177 VKAVID--DHTCAVVV-E-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGD---LFAYMHY-GVTPD- 247 (403)
T ss_pred HHHHhc--CCeEEEEE-e-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc---chhhhhc-CCCCC-
Confidence 988886 44555555 3 788887765 899999999999999999999999998877642 2222111 11112
Q ss_pred EEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHH
Q 015435 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRI 325 (407)
Q Consensus 246 i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 325 (407)
+.||||.++ +|+|+||+ +++ +.+.+.+.......+.+++++.|.++.+.|+... ..+.++++
T Consensus 248 --i~s~sK~l~-~G~rig~v--v~~-----~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~--------~~~~~~~~ 309 (403)
T PRK05093 248 --ILTSAKALG-GGFPIGAM--LTT-----AEIASHFKVGTHGSTYGGNPLACAVAEAVFDIIN--------TPEVLEGV 309 (403)
T ss_pred --EEEeccccc-CCcceEEE--EEc-----HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh--------hccHHHHH
Confidence 568999999 89999999 566 4455555443333445778888888888664321 12445778
Q ss_pred HHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCC------H-HHHHHhHhhccEEEcCCC----eEEecC-CCCCChh
Q 015435 326 ISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN------S-EQVAFMTKEYHIYMTSDG----RISMAG-LSSKTVP 393 (407)
Q Consensus 326 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~l~~~gi~~~~gg----Ris~~~-~~~e~i~ 393 (407)
+++++++.+.|++++.........+..|++.|+.+. . ++...+++ +||.+.++| ||+++. +++++++
T Consensus 310 ~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~-~Gv~v~~~g~~~lRl~~~~~~~~~~i~ 388 (403)
T PRK05093 310 KARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYKGRARDFLNAAAE-EGVMVLVAGPDVLRFAPSLVIEEADID 388 (403)
T ss_pred HHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcchhHHHHHHHHHHH-CCeEEecCCCCEEEEeCCCCCCHHHHH
Confidence 889999999998764211121223345677776541 2 33445544 799999865 886554 4889999
Q ss_pred HHHHHHHHHHHhh
Q 015435 394 HLTDAIHAAVTRM 406 (407)
Q Consensus 394 ~~~~~l~~~l~~~ 406 (407)
+++++|+++++++
T Consensus 389 ~~~~~l~~~l~~~ 401 (403)
T PRK05093 389 EGLARFEKAVAKV 401 (403)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988753
No 134
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.95 E-value=1.6e-25 Score=211.84 Aligned_cols=285 Identities=15% Similarity=0.087 Sum_probs=192.6
Q ss_pred cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEee
Q 015435 77 LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYY 156 (407)
Q Consensus 77 ~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~ 156 (407)
+.++++.+++++ +. +++.+ ++|+++++..++ ...+.+||.|+++.+.|.+....++..|++++.+|.+
T Consensus 53 ~~~~~e~lA~~~-g~-------~~~~i--~~g~~~a~~~~~--~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~ 120 (370)
T TIGR02539 53 IHDFLEDLAEFL-GM-------DEARV--THGAREGKFAVM--HALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHT 120 (370)
T ss_pred HHHHHHHHHHHh-CC-------CceEE--ECChHHHHHHHH--HHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecC
Confidence 567788888888 54 56788 999999999884 4446899999999888766667788999999999985
Q ss_pred cCCCCCcChhhHHHHHHcC-----CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCch
Q 015435 157 DPATRGLNFQGLLEDLRAA-----PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDAD 231 (407)
Q Consensus 157 ~~~~~~~d~~~l~~~i~~~-----~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~ 231 (407)
.+.++.+|++++++.+.+. ++++++++ ++|+||||... ++++|+++|+++|+++|+|++|...... . +
T Consensus 121 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~-~~p~~~~G~~~---~l~~i~~la~~~~~~livDea~~~g~~~-~--~ 193 (370)
T TIGR02539 121 GHPEYKVDPEGYGEVIEEVEDESGKPPVLALL-THVDGEYGNLP---DAGKVAKVCREKGVPLLLNCAYTVGRMP-V--S 193 (370)
T ss_pred CcccCCcCHHHHHHHHHHhhhccCCCcEEEEE-ECCCCCCcccc---CHHHHHHHHHHcCCeEEEECccccCCcC-C--C
Confidence 3345789999999998631 13456555 89999999955 5778888899999999999999764321 1 1
Q ss_pred hHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccC--------CCChhHHHHHHH
Q 015435 232 AQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYS--------SPPIHGASIVAT 303 (407)
Q Consensus 232 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ 303 (407)
. .. .+..++++|+||.++ +|.|+||+ +++ ++ +.+.+.....++.. ......+.++..
T Consensus 194 ~------~~-~~~di~v~s~sK~~~-~~g~~G~l--~~~-~~----~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (370)
T TIGR02539 194 A------KE-IGADFIVGSGHKSMA-ASGPCGVL--GMS-EE----WEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMA 258 (370)
T ss_pred H------HH-cCCCEEEeeCccccc-CCCCEEEE--EEC-HH----HHhhhcccccCCccceeeeecccccccHHHHHHH
Confidence 1 11 124466799999998 56789998 465 44 44444433322111 112223434443
Q ss_pred HhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc--cCCceeEEecCCC------------HHHHHHhH
Q 015435 304 ILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHI--IKQIGMFTFTGLN------------SEQVAFMT 369 (407)
Q Consensus 304 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~------------~~~~~~~l 369 (407)
.+... .+.++..++.++. ++++.+.|+++| +... .+..+.|+++... ...+.+.|
T Consensus 259 al~~~------~~~l~~~~~~~~~-~~~l~~~L~~~g----~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L 327 (370)
T TIGR02539 259 SFPHV------VERVKRWDEEVKK-TRWFVAELEDIG----FIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEEL 327 (370)
T ss_pred HHHHH------HHHHHHHHHHHHH-HHHHHHHHHhCC----cEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHH
Confidence 34321 1334444444444 458999999887 5532 2333444444321 22466667
Q ss_pred hhccEE-EcCCC----eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 370 KEYHIY-MTSDG----RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 370 ~~~gi~-~~~gg----Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
.++||. +.++. ||++...+++++++++++|+++++++
T Consensus 328 ~e~GI~~ir~~~~~~iRis~~~~t~e~i~~l~~~L~~~~~~~ 369 (370)
T TIGR02539 328 KKRGIHGIRSGQTKYFKLSVYGLTKEQVEYVVDSFEEIVEEY 369 (370)
T ss_pred HhCCCccccCCcceEEEEEecCCCHHHHHHHHHHHHHHHHhc
Confidence 778997 77753 88863358999999999999998764
No 135
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.95 E-value=1.5e-25 Score=210.20 Aligned_cols=291 Identities=18% Similarity=0.129 Sum_probs=196.3
Q ss_pred cCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHH---HHhhc
Q 015435 70 EYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPK---VFTLA 146 (407)
Q Consensus 70 ~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~---~~~~~ 146 (407)
.|.+.....++++.+++++ + ++++++ ++||++++.+++ ...+.+||+|++++|+|..+.. .....
T Consensus 27 ~~~~~~~~~~l~~~~a~~~-g-------~~~~~~--~~~gt~a~~~~~--~~l~~~gd~v~~~~~~~~~~~~~~~~~~~~ 94 (338)
T cd06502 27 VYGEDPTTAKLEARAAELF-G-------KEAALF--VPSGTAANQLAL--AAHTQPGGSVICHETAHIYTDEAGAPEFLS 94 (338)
T ss_pred ccCCCHHHHHHHHHHHHHh-C-------CCeEEE--ecCchHHHHHHH--HHhcCCCCeEEEecCcceeeecCCcHHHHc
Confidence 5767778889999999988 4 267888 899999998884 3347799999999999876543 34458
Q ss_pred CceeeEEEeecCCCCCcChhhHHHHHHcC-----CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccc
Q 015435 147 GLSVKTYRYYDPATRGLNFQGLLEDLRAA-----PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQ 221 (407)
Q Consensus 147 G~~~~~v~~~~~~~~~~d~~~l~~~i~~~-----~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~ 221 (407)
|++++.++. +. +.+|++++++++.+. ++++++++ ++|+|| |.+++.+++++|+++|++||+++|+|++|.
T Consensus 95 g~~~~~v~~--~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l-~~p~n~-g~~~~~~~l~~i~~~~~~~~~~livDea~~ 169 (338)
T cd06502 95 GVKLLPVPG--EN-GKLTPEDLEAAIRPRDDIHFPPPSLVSL-ENTTEG-GTVYPLDELKAISALAKENGLPLHLDGARL 169 (338)
T ss_pred CceEEeecC--CC-CcCCHHHHHHHhhccCCCcCCcceEEEE-EeecCC-ccccCHHHHHHHHHHHHHcCCeEeechHHH
Confidence 999999987 22 579999999998742 24566665 899998 667799999999999999999999999985
Q ss_pred cccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHH
Q 015435 222 GFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIV 301 (407)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (407)
.+....... ++..... ..+ +++.|+||.++++| |++ ++.++++.+.+....... ....+.+.+.+.++
T Consensus 170 ~~~~~~~~~---~~~~~~~-~~d-~~~~s~sK~~~~~~---g~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~ 237 (338)
T cd06502 170 ANAAAALGV---ALKTYKS-GVD-SVSFCLSKGGGAPV---GAV--VVGNRDFIARARRRRKQA--GGGMRQSGFLAAAG 237 (338)
T ss_pred HHHHHhcCC---CHHHHHh-cCC-EEEEeccccCCCcc---ceE--EECCHHHHHHHHHHHHHh--CCChhhHHHHHHHH
Confidence 432111101 1222222 222 56789999999876 664 455666555543321111 11223455666777
Q ss_pred HHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEec-CCCHHHHHHhHh------hccE
Q 015435 302 ATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFT-GLNSEQVAFMTK------EYHI 374 (407)
Q Consensus 302 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~------~~gi 374 (407)
...|+... ..+..+++.++++++.+.|++.+ +.+..+.++++.+. .-+......+++ ++|+
T Consensus 238 ~~~L~~~~--------~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi 305 (338)
T cd06502 238 LAALENDL--------WLRRLRHDHEMARRLAEALEELG----GLESEVQTNIVLLDPVEANAVFVELSKEAIERRGEGV 305 (338)
T ss_pred HHHhcCch--------HHHHHHHHHHHHHHHHHHHHhcC----CCcccccCCeEEEecCCccHHHHHHHHHHHHhhhCCE
Confidence 77776532 22444677777889999999887 44445556654432 222222223332 4799
Q ss_pred EEcCCC----eEEecC-CCCCChhHHHHHHHH
Q 015435 375 YMTSDG----RISMAG-LSSKTVPHLTDAIHA 401 (407)
Q Consensus 375 ~~~~gg----Ris~~~-~~~e~i~~~~~~l~~ 401 (407)
.+.+.+ ||+... .++++++++++++++
T Consensus 306 ~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 306 LFYAWGEGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred EEEecCCCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 887653 888764 377899999998865
No 136
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.95 E-value=1.7e-25 Score=213.55 Aligned_cols=331 Identities=11% Similarity=0.094 Sum_probs=215.7
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC 106 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t 106 (407)
...+++++|+..|....+.| ..++.+++++.+++. .......+.......++.++++++. + .+.+++ +
T Consensus 36 d~~G~~~lD~~~g~~~~~lG-h~~p~v~~ai~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~-~-------~~~~~~--~ 103 (396)
T PRK04073 36 DPEGNRYMDMLSAYSAVNQG-HRHPKIIQALKDQAD-KVTLTSRAFHSDQLGPWYEKVAKLT-G-------KDMVLP--M 103 (396)
T ss_pred ECCCCEEEEcCCCHHhccCC-CCCHHHHHHHHHHHh-hccccccccCCHHHHHHHHHHHhcC-C-------CCeEEE--c
Confidence 45678999999886655566 667788888888775 1111111222233445666666643 2 168999 9
Q ss_pred CCcccHHHHHHHHHHhhc-------CC-CeEEecCCCCCChHH-HHhhcCce------------eeEEEeecCCCCCcCh
Q 015435 107 LSGTGSLRVGAEFLARHY-------HQ-LTIYIPQPTWGNHPK-VFTLAGLS------------VKTYRYYDPATRGLNF 165 (407)
Q Consensus 107 ~g~t~a~~~~~~~~~~~~-------~g-d~Vi~~~p~y~~~~~-~~~~~G~~------------~~~v~~~~~~~~~~d~ 165 (407)
++|++|++.++++..... +| ++|+..+-+|++... .+...+.. +..++. .|+
T Consensus 104 ~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~ 176 (396)
T PRK04073 104 NTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-------GDL 176 (396)
T ss_pred CChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-------CCH
Confidence 999999999987776541 34 678888877776543 32222211 112211 277
Q ss_pred hhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHH-HHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCc
Q 015435 166 QGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLE-QWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGE 244 (407)
Q Consensus 166 ~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~-~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~ 244 (407)
+++++.+. ++++++++ ++++||||.+++.+ .+++|.++|++||+++|+||+|.+++..+ ..+.... .....+
T Consensus 177 ~~l~~~i~--~~~~~vii-ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g---~~~~~~~-~~~~pd 249 (396)
T PRK04073 177 EALKAAIT--PNTAAFLV-EPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTG---KLFACDW-DNVTPD 249 (396)
T ss_pred HHHHHhcc--cCeEEEEE-cCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCc---HHHHhhh-cCCCCC
Confidence 88888886 45666555 88899999998754 69999999999999999999999887653 2222111 111122
Q ss_pred EEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHH
Q 015435 245 CLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADR 324 (407)
Q Consensus 245 ~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (407)
+.++||.+|.+|+|+||+ +++ + ++.+.+.......+++.+++++.++.+.|+... + +...++
T Consensus 250 ---i~~~sK~lg~gg~~ig~~--~~~-~----~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~------~--~~l~~~ 311 (396)
T PRK04073 250 ---MYILGKALGGGVFPISCV--AAN-R----DILGVFTPGSHGSTFGGNPLACAVSIAALEVLE------E--EKLPER 311 (396)
T ss_pred ---EEEecccccCCCCcceEE--EEc-H----HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH------h--cCHHHH
Confidence 335799999888999999 465 3 444444433333455778888888888876321 1 234466
Q ss_pred HHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCC--CHHHHHHhHhhccEEEcCCC----eEEecC-CCCCChhHHHH
Q 015435 325 IISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL--NSEQVAFMTKEYHIYMTSDG----RISMAG-LSSKTVPHLTD 397 (407)
Q Consensus 325 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~~~~gg----Ris~~~-~~~e~i~~~~~ 397 (407)
.+++++++.+.|++++.+ .+....+.| .|.++.+ +.+.+.+.|.++||.+.+.+ ||++.. .++++++++++
T Consensus 312 ~~~~~~~l~~~L~~l~~~-~i~~~~~~g-~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iRi~p~l~~t~e~i~~~~~ 389 (396)
T PRK04073 312 SLELGEYFKEQLKEIDNP-MIKEVRGRG-LFIGVELNEPARPYCEALKEEGLLCKETHETVIRFAPPLVITKEELDWAFE 389 (396)
T ss_pred HHHHHHHHHHHHHhhcCC-cccceecce-EEEEEEecchHHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHHHHHH
Confidence 677788899988876521 133334444 4455544 33344444556899998754 887432 48899999999
Q ss_pred HHHHHH
Q 015435 398 AIHAAV 403 (407)
Q Consensus 398 ~l~~~l 403 (407)
+|++++
T Consensus 390 ~l~~~l 395 (396)
T PRK04073 390 KIKAVL 395 (396)
T ss_pred HHHHHh
Confidence 999875
No 137
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.95 E-value=1.6e-25 Score=210.92 Aligned_cols=323 Identities=15% Similarity=0.096 Sum_probs=208.4
Q ss_pred CeeeeeeeeeecCCCccccchhHHHHHHHHhccccc-cccC----CCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec
Q 015435 32 VKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSR-VKEY----LPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC 106 (407)
Q Consensus 32 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~y----~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t 106 (407)
.+++|+...+ .|-+.++++++++.+.+. +... ...| .......++++.+++++ +. ++.++ +
T Consensus 2 ~~~~~~~~~~---~~~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-~~-------~~~iv--~ 67 (349)
T cd06454 2 KVLNFCSNDY---LGLANHPEVIEAAKEALD-KYGVGAGGSRLISGTSDLHEELEEELAEFH-GK-------EAALV--F 67 (349)
T ss_pred CceecccCCc---cccCCCHHHHHHHHHHHH-HhCCCCCCcCeecCCchHHHHHHHHHHHHh-CC-------CCEEE--e
Confidence 5677887765 675657777777777765 2111 1122 22334577888888877 43 34556 6
Q ss_pred CCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC--CCCcEEEEe
Q 015435 107 LSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA--PSGAIVLLH 184 (407)
Q Consensus 107 ~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~--~~~~~v~i~ 184 (407)
++|++++.+++ ...+.+||.|++++|.|+.+...++..|.+++.++. .|++++++.+.+. +.+..++++
T Consensus 68 ~sg~~a~~~~~--~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~ 138 (349)
T cd06454 68 SSGYAANDGVL--STLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIVT 138 (349)
T ss_pred ccHHHHHHHHH--HHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEEE
Confidence 67778887763 444679999999999999988888899999887753 4778888888742 134455555
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHH-HcCCcEEEEEecCccccccCCCcc
Q 015435 185 ACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFV-ADGGECLVAQSYAKNMGLYGERVG 263 (407)
Q Consensus 185 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G 263 (407)
++++||||+.. ++++|+++|+++|+++|+|++|........ .... ..+. ...+..++++|+||.++.+| |
T Consensus 139 ~~~~~~tG~~~---~~~~i~~~~~~~~~~livD~a~~~g~~~~~-~~~~--~~~~~~~~~~~i~~~s~sK~~~~~g---G 209 (349)
T cd06454 139 EGVYSMDGDIA---PLPELVDLAKKYGAILFVDEAHSVGVYGPH-GRGV--EEFGGLTDDVDIIMGTLGKAFGAVG---G 209 (349)
T ss_pred eccccCCCCcc---CHHHHHHHHHHcCCEEEEEccccccccCCC-CCCh--hhhccccccCcEEEeechhhhcccC---C
Confidence 89999999965 478888999999999999999864332211 1111 1111 22356799999999998655 8
Q ss_pred eeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 015435 264 ALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPG 343 (407)
Q Consensus 264 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 343 (407)
|+ +. ++++.+.+........ .....+...+.++...++... + .+..++++.++++++.+.|++.+
T Consensus 210 ~i--~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~------~-~~~~~~~~~~~~~~l~~~l~~~g--- 274 (349)
T cd06454 210 YI--AG-SKELIDYLRSYARGFI--FSTSLPPAVAAAALAALEVLQ------G-GPERRERLQENVRYLRRGLKELG--- 274 (349)
T ss_pred EE--EC-CHHHHHHHHHhchhhh--ccCCCCHHHHHHHHHHHHHHh------c-CHHHHHHHHHHHHHHHHHHHhcC---
Confidence 87 44 4554444333221111 112344455555555554221 1 35567888899999999998876
Q ss_pred CcccccCCceeEEecC----CCHHHHHHhHhhccEEEcCC---------C--eEEecC-CCCCChhHHHHHHHHH
Q 015435 344 DWSHIIKQIGMFTFTG----LNSEQVAFMTKEYHIYMTSD---------G--RISMAG-LSSKTVPHLTDAIHAA 402 (407)
Q Consensus 344 ~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gi~~~~g---------g--Ris~~~-~~~e~i~~~~~~l~~~ 402 (407)
+....+.++++.+.. .+.+.+.+.|.++||.+.++ + ||+++. .+++++++++++|+++
T Consensus 275 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 275 -FPVGGSPSHIIPPLIGDDPAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred -CcccCCCCCcEEEEeCCChHHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 444444344433321 23344555555569998652 2 888864 5789999999999764
No 138
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.95 E-value=1.1e-25 Score=216.86 Aligned_cols=341 Identities=16% Similarity=0.116 Sum_probs=225.9
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC 106 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t 106 (407)
...++.++|+..|.+..+.| ..++.+++++.+++. .. .+.+.+..+..++++++++++.. .+++++ +
T Consensus 44 d~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~--~~-~~~~~~~~~~~~lae~l~~~~~~-------~~~v~~--~ 110 (423)
T TIGR00713 44 DVDGNEYIDYVLSWGPLILG-HAHPRVVEAVKEALE--RG-TSYGAPTEAEILLAKEIISRVPS-------VEMVRF--V 110 (423)
T ss_pred eCCCCEEEEccccccccccC-CCCHHHHHHHHHHHH--hC-CcCCCCCHHHHHHHHHHHHhCCc-------ccEEEE--e
Confidence 45678999999998755567 678888888888886 22 22223566789999999998732 168999 9
Q ss_pred CCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhh---cCceeeEEEeec-------CCCC---CcChhhHHHHHH
Q 015435 107 LSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTL---AGLSVKTYRYYD-------PATR---GLNFQGLLEDLR 173 (407)
Q Consensus 107 ~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~---~G~~~~~v~~~~-------~~~~---~~d~~~l~~~i~ 173 (407)
+||++|++.++++.+.....++|+...++|+++...+.. .|......+... +... ..|++++++.+.
T Consensus 111 ~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~ 190 (423)
T TIGR00713 111 NSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFE 190 (423)
T ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHH
Confidence 999999999988877666678999999999998654332 111111111100 0000 027889998886
Q ss_pred cC-CCCcEEEEecCCCCCCCCCCC-HHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEec
Q 015435 174 AA-PSGAIVLLHACAHNPTGVDPT-LEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSY 251 (407)
Q Consensus 174 ~~-~~~~~v~i~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 251 (407)
+. ++.+++++.+.++| +|.+.+ ++.+++|.++|++||+++|+||+|.++..+. ......+ ....+ +.+|
T Consensus 191 ~~~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~----~~~~~~~-~~~pD---i~t~ 261 (423)
T TIGR00713 191 EYGEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVAL----GGAQEYF-GVEPD---LTTL 261 (423)
T ss_pred HcCCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCc----chhHHHh-CCCcc---hhhh
Confidence 43 34567777678899 788877 6899999999999999999999999885431 1111112 11122 2369
Q ss_pred CccccccCCCcceeEEeecChhhHHHHHHHHhh---hhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHH
Q 015435 252 AKNMGLYGERVGALSIVCKTEDVASRVESQLKL---VIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISM 328 (407)
Q Consensus 252 sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 328 (407)
||.++ +|+|+||+ +++ +.+.+.+.. .....+++.+++++.++.+.++... +. +..+..++...+.
T Consensus 262 sK~l~-~G~pig~v--~~~-----~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~--~~--~~~~~~~~~~~~~ 329 (423)
T TIGR00713 262 GKIIG-GGLPVGAF--GGR-----REIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLD--EE--GVYTELDELAKRL 329 (423)
T ss_pred hhhhc-CCCceeee--eEH-----HHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHh--cc--cHHHHHHHHHHHH
Confidence 99999 89999999 565 444444432 1222345778888888887776321 00 1344555556666
Q ss_pred HHHHHHHHHhcCCCCCccc-ccCCceeEEe-cCC------------CHH---HHHHhHhhccEEEcCCC----eEEecCC
Q 015435 329 RQQLFDALSARGTPGDWSH-IIKQIGMFTF-TGL------------NSE---QVAFMTKEYHIYMTSDG----RISMAGL 387 (407)
Q Consensus 329 ~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~-~~~------------~~~---~~~~~l~~~gi~~~~gg----Ris~~~~ 387 (407)
++.+.+.+++.+ +.. ....|+++.+ +.. +.+ .+...+.++||.+.+++ |+++. .
T Consensus 330 ~~~l~~~~~~~~----~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~l~~~-~ 404 (423)
T TIGR00713 330 AEGLSEVLEDTG----IPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPSQFEACFLSAA-H 404 (423)
T ss_pred HHHHHHHHHhcC----CCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecCCccceeeECC-C
Confidence 666766666665 332 2234555443 321 111 23333445899987754 88877 4
Q ss_pred CCCChhHHHHHHHHHHHhh
Q 015435 388 SSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 388 ~~e~i~~~~~~l~~~l~~~ 406 (407)
+++++++++++|.++++++
T Consensus 405 t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 405 TEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred CHHHHHHHHHHHHHHHhhC
Confidence 8999999999999998764
No 139
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.95 E-value=3.5e-25 Score=210.56 Aligned_cols=337 Identities=13% Similarity=0.113 Sum_probs=219.9
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC 106 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t 106 (407)
...+++++||..|....+.| ..++++++++.+++. .. .+ . ......++++++++.+....+ .+.+++ +
T Consensus 25 d~~G~~~lD~~s~~~~~~lG-~~~p~v~~a~~~~~~--~~-~~-~-~~~~~~~~~~~la~~l~~~~~----~~~~~~--~ 92 (377)
T PRK02936 25 DNNGKTYLDFTSGIAVCNLG-HCHPTVTKAVQEQLD--DI-WH-V-SNLFTNSLQEEVASLLAENSA----GDLVFF--C 92 (377)
T ss_pred eCCCCEEEECCcchhhccCC-CCCHHHHHHHHHHHH--hc-cc-c-ccccCCHHHHHHHHHHHhcCC----CCEEEE--e
Confidence 34678999999997544467 567788888888876 21 11 1 123446788889998844322 157888 9
Q ss_pred CCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHH-HhhcCceee---EEEeecCCCC--CcChhhHHHHHHcCCCCcE
Q 015435 107 LSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKV-FTLAGLSVK---TYRYYDPATR--GLNFQGLLEDLRAAPSGAI 180 (407)
Q Consensus 107 ~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~-~~~~G~~~~---~v~~~~~~~~--~~d~~~l~~~i~~~~~~~~ 180 (407)
+||++|++.+.++.......++|+..+++|++.... ....|.... ..|....... -.|++.+++.+. +++++
T Consensus 93 ~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~--~~~~~ 170 (377)
T PRK02936 93 NSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMN--EEVAA 170 (377)
T ss_pred CCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhcc--CCeEE
Confidence 999999999976554443446799999988755432 222221110 0111000000 126888998886 45666
Q ss_pred EEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccC
Q 015435 181 VLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYG 259 (407)
Q Consensus 181 v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 259 (407)
+++ ..+++++|.. .+++++++|.++|++||+++|+||+|.++.+.+ ...+...+ ....+ +.++||.++ +|
T Consensus 171 ii~-e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g---~~~~~~~~-~~~~d---i~t~sK~l~-~G 241 (377)
T PRK02936 171 VML-EVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTG---TLFAYEQF-GLDPD---IVTVAKGLG-NG 241 (377)
T ss_pred EEE-ecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---hhhHHHhh-CCCCc---EEEEccccc-CC
Confidence 666 7778898887 688999999999999999999999999887654 22222222 11222 236999999 89
Q ss_pred CCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015435 260 ERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSAR 339 (407)
Q Consensus 260 ~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 339 (407)
+|+||+ +++ ++ +.+.+.......+.++++++|.++.++++... .+...++++++.+++.+.|++.
T Consensus 242 ~~ig~v--~~~-~~----~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~--------~~~~~~~~~~~~~~l~~~L~~~ 306 (377)
T PRK02936 242 IPVGAM--IGK-KE----LGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIK--------QPSFLEEVQEKGEYFLQKLQEE 306 (377)
T ss_pred CccEEE--EEc-HH----HHhhccCCCCCCCCCCCHHHHHHHHHHHHHHH--------hccHHHHHHHHHHHHHHHHHHH
Confidence 999999 565 44 44444433333445778889999988886431 1233455666777777776653
Q ss_pred --CCCCCcccccCCceeEEecCCC--HHHHHHhHhhccEEEcCCC----eEEec-CCCCCChhHHHHHHHHHH
Q 015435 340 --GTPGDWSHIIKQIGMFTFTGLN--SEQVAFMTKEYHIYMTSDG----RISMA-GLSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 340 --~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gi~~~~gg----Ris~~-~~~~e~i~~~~~~l~~~l 403 (407)
+.+. .....+ .|++.|+.+. .+.+...|.++||.+.|+| ||++. ..+++++++++++|++++
T Consensus 307 ~~~~~~-~~~v~~-~g~~~~i~~~~~~~~~~~~l~~~gv~v~~~g~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 307 LEHLEC-VKNIRG-KGLMIGIECTEEVAPVIEQLREEGLLVLSAGPNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred HhhCCc-EEeEee-cceEEEEEecchHHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 2110 222223 4577777663 4455566777999999876 88852 358899999999998763
No 140
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.94 E-value=2.3e-25 Score=213.07 Aligned_cols=341 Identities=13% Similarity=0.093 Sum_probs=222.1
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC 106 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t 106 (407)
..+++++||+..|....+.| ..++++++++.+++.+-......| ......++.+++++.. + .+.+++ +
T Consensus 35 d~dG~~~lD~~~g~~~~~lG-h~~p~v~~A~~~~~~~~~~~~~~~-~~~~~~~la~~l~~~~-~-------~~~v~~--~ 102 (406)
T PRK12381 35 DQQGKEYIDFAGGIAVNALG-HAHPALREALNEQASKFWHTGNGY-TNEPVLRLAKKLIDAT-F-------ADRVFF--C 102 (406)
T ss_pred eCCCCEEEEcCcCHhhccCC-CCCHHHHHHHHHHHhhcccccCcc-CCHHHHHHHHHHHhhC-C-------CCeEEE--c
Confidence 35678999999986655677 557788888888875111111112 1222445666666654 2 268999 9
Q ss_pred CCcccHHHHHHHHHHhhc------CCCeEEecCCCCCChHHHHhhcCceeeEE----Eeec--CCCCCcChhhHHHHHHc
Q 015435 107 LSGTGSLRVGAEFLARHY------HQLTIYIPQPTWGNHPKVFTLAGLSVKTY----RYYD--PATRGLNFQGLLEDLRA 174 (407)
Q Consensus 107 ~g~t~a~~~~~~~~~~~~------~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v----~~~~--~~~~~~d~~~l~~~i~~ 174 (407)
+||++|++.++++.+... ...+|+..+.+|++........+...... ++.. ....-.|++.+++.+.
T Consensus 103 ~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~- 181 (406)
T PRK12381 103 NSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALID- 181 (406)
T ss_pred CCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhcc-
Confidence 999999999988876552 34679999999988865443332211100 0000 0001137888888886
Q ss_pred CCCCcEEEEecCCCCCCCCCC--CHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecC
Q 015435 175 APSGAIVLLHACAHNPTGVDP--TLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYA 252 (407)
Q Consensus 175 ~~~~~~v~i~~~p~NPtG~~~--~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 252 (407)
++..++++ .|.||+|-++ +.+.+++|+++|++||+++|+||+|.++++.+ ..+....+.. ..+ +.++|
T Consensus 182 -~~~aavii--EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G---~~~~~~~~~v-~pD---i~t~s 251 (406)
T PRK12381 182 -DQTCAVIV--EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTG---ELYAYMHYGV-TPD---VLTTA 251 (406)
T ss_pred -CCeeEEEE--eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCc---chhhhHhhCC-CCC---EEEeh
Confidence 44455554 5899998764 79999999999999999999999998887754 2222222211 112 35899
Q ss_pred ccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHH
Q 015435 253 KNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQL 332 (407)
Q Consensus 253 K~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 332 (407)
|.++ +|+|+||+ +++ +++.+.+.......+++.+++.+.++.+.++... -.+++++++++.+++
T Consensus 252 K~l~-gG~~ig~~--~~~-----~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~--------~~~~~~~~~~~~~~l 315 (406)
T PRK12381 252 KALG-GGFPIGAM--LTT-----EKCASVMTVGTHGTTYGGNPLASAVAGKVLELIN--------TPEMLNGVKQRHDWF 315 (406)
T ss_pred hhhh-CCCceEEE--EEc-----HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh--------hccHHHHHHHHHHHH
Confidence 9998 89999999 566 4455555544334455778888888887764221 224668888888999
Q ss_pred HHHHHhcCCCCCcccccCCceeEEecCCC------HHHHHHhHhhccEEEcCCC----eEEecC-CCCCChhHHHHHHHH
Q 015435 333 FDALSARGTPGDWSHIIKQIGMFTFTGLN------SEQVAFMTKEYHIYMTSDG----RISMAG-LSSKTVPHLTDAIHA 401 (407)
Q Consensus 333 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~gi~~~~gg----Ris~~~-~~~e~i~~~~~~l~~ 401 (407)
.+.|++++....+.......|++.++.+. ...+...+.++||.+.+.| ||+++. ++++++++++++|++
T Consensus 316 ~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~p~~~~t~~~i~~~~~~l~~ 395 (406)
T PRK12381 316 VERLNTINARYGLFSEIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIAGPNVVRFAPALNISEEEITTGLDRFAR 395 (406)
T ss_pred HHHHHHHHhhCCCEEEEecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeCCCCEEEEeCCccCCHHHHHHHHHHHHH
Confidence 98888764211111112233555555432 2345566677899998754 777654 588999999999999
Q ss_pred HHHhh
Q 015435 402 AVTRM 406 (407)
Q Consensus 402 ~l~~~ 406 (407)
+++++
T Consensus 396 ~l~~~ 400 (406)
T PRK12381 396 ACERF 400 (406)
T ss_pred HHHHH
Confidence 98754
No 141
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.94 E-value=1.5e-24 Score=208.17 Aligned_cols=330 Identities=17% Similarity=0.122 Sum_probs=220.3
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccc--cCCC----CCCcHHHHHHHHHHHhCCCCCCCCCCceEE
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVK--EYLP----IVGLVDFNKLSAKLILGADSPAIKDNRVTT 103 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~y~~----~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~ 103 (407)
+..++-|..|.. | +.|..++++..+.+.......+ .+.. ...++++|+.+++++ +.. ++++|++
T Consensus 16 ~~~~~yld~~~~----~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~-~~~----~~~~v~~ 85 (403)
T TIGR01979 16 GKPLVYLDSAAT----S-QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFI-NAA----SDEEIVF 85 (403)
T ss_pred CCceEEEeCccc----c-CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHh-CcC----CCCeEEE
Confidence 456777776653 4 5566676666555431111111 1100 124678999999988 532 1368999
Q ss_pred eecCCcccHHHHHHHHHH--hhcCCCeEEecCCCCCChH----HHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCC
Q 015435 104 VQCLSGTGSLRVGAEFLA--RHYHQLTIYIPQPTWGNHP----KVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPS 177 (407)
Q Consensus 104 ~~t~g~t~a~~~~~~~~~--~~~~gd~Vi~~~p~y~~~~----~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 177 (407)
|+|+|+++.+++..+. .+.+||+|+++++.|++.. ...+..|.+++.++.+ .++.+|++++++.+. ++
T Consensus 86 --~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~--~~ 159 (403)
T TIGR01979 86 --TRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD--DDGTLDLDDLEKLLT--EK 159 (403)
T ss_pred --eCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC--CCCCCCHHHHHHHhc--cC
Confidence 9999999998853332 2468999999999887643 4455789999999983 456789999999987 56
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccc
Q 015435 178 GAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGL 257 (407)
Q Consensus 178 ~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 257 (407)
++++++ ++++||||++++ +++|+++|+++|+++|+|++|+..... . .+ ......+++.|++|.+|.
T Consensus 160 ~~lv~~-~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~~~-~-----~~----~~~~~d~~~~s~~K~~gp 225 (403)
T TIGR01979 160 TKLVAI-THVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPHMP-V-----DV----QALDCDFYVFSGHKMYGP 225 (403)
T ss_pred CeEEEE-EcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCccc-c-----Cc----cccCCCEEEEecccccCC
Confidence 677666 899999999887 678888899999999999998643221 1 11 112356888999998886
Q ss_pred cCCCcceeEEeecChhhHHHHHHHHhhhh---------------------hcccCCCChhHHHHHHHHhcChhhHHhHHH
Q 015435 258 YGERVGALSIVCKTEDVASRVESQLKLVI---------------------RPMYSSPPIHGASIVATILKDSTMYKEWTL 316 (407)
Q Consensus 258 ~G~r~G~~~~v~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 316 (407)
+| +|++ +++ ++ +.+.+.... +....+++...+.++..+++.. .+
T Consensus 226 ~G--~g~l--~~~-~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~------~~ 290 (403)
T TIGR01979 226 TG--IGVL--YGK-EE----LLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYL------EA 290 (403)
T ss_pred CC--ceEE--EEc-hH----HHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHH------HH
Confidence 66 7888 455 33 333222110 0011234444444544444321 12
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCC-----ceeEEec--CCCHHHHHHhHhhccEEEcCC---------
Q 015435 317 -ELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQ-----IGMFTFT--GLNSEQVAFMTKEYHIYMTSD--------- 379 (407)
Q Consensus 317 -~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~~~l~~~gi~~~~g--------- 379 (407)
..++.+++..+.++++.+.|++++. +++..+. ++++.+. +.+.+.+...|+++||.+.+|
T Consensus 291 ~g~~~~~~~~~~l~~~l~~~l~~~~g---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~ 367 (403)
T TIGR01979 291 IGLENIEAHEHELTAYALERLGEIPG---LRIYGPRDAEDRGGIISFNVEGVHPHDVGTILDEEGIAVRSGHHCAQPLMR 367 (403)
T ss_pred hCHHHHHHHHHHHHHHHHHHHhcCCC---EEEeCCCCccccCceEEEEeCCcCHHHHHHHHhhCCEEEcchhhhhHHHHH
Confidence 2456778888999999999987742 5554432 5555443 455666667778899998753
Q ss_pred -----C--eEEecC-CCCCChhHHHHHHHHHHHhhC
Q 015435 380 -----G--RISMAG-LSSKTVPHLTDAIHAAVTRMG 407 (407)
Q Consensus 380 -----g--Ris~~~-~~~e~i~~~~~~l~~~l~~~~ 407 (407)
+ |||++. .+++|+++++++|+++++.+|
T Consensus 368 ~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~~ 403 (403)
T TIGR01979 368 RFGVPATCRASFYIYNTEEDIDALVEALKKVRKFFG 403 (403)
T ss_pred HhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHHhC
Confidence 2 999874 377999999999999998876
No 142
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.94 E-value=1.1e-24 Score=209.07 Aligned_cols=333 Identities=15% Similarity=0.118 Sum_probs=218.4
Q ss_pred CeeeeeeeeeecCCCccccchhHHHHHHHHhcccccc--ccCC--C--CCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 32 VKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRV--KEYL--P--IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 32 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~y~--~--~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
+++-|..+. -+ |.|..++++..+.+....... ..+. + ..-++++|+.+++++ +.. ++++|++
T Consensus 23 ~~iYld~a~----~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-~~~----~~~~v~~-- 90 (406)
T PRK09295 23 PLAYLDSAA----SA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFI-NAR----SAEELVF-- 90 (406)
T ss_pred ceEEEeCcc----cc-cCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHc-CcC----CCCeEEE--
Confidence 456666553 13 556677666655553111011 1110 0 122668899999988 431 2478999
Q ss_pred cCCcccHHHHHHHHHH--hhcCCCeEEecCCCCCCh----HHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCc
Q 015435 106 CLSGTGSLRVGAEFLA--RHYHQLTIYIPQPTWGNH----PKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGA 179 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~--~~~~gd~Vi~~~p~y~~~----~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 179 (407)
|+|+|+++.+++..+. .+.+||+|+++++.|++. ....+..|++++.++.+ .++.+|++++++.+. ++++
T Consensus 91 t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~--~~t~ 166 (406)
T PRK09295 91 VRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLN--PDGTLQLETLPALFD--ERTR 166 (406)
T ss_pred eCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecC--CCCCCCHHHHHHhcC--CCcE
Confidence 9999999998854321 357899999999887643 44556789999999983 346689999999987 5677
Q ss_pred EEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccC
Q 015435 180 IVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYG 259 (407)
Q Consensus 180 ~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 259 (407)
++++ ++|+||||++.+ +++|+++|+++|+++++|++|+..... . .+ ...+..+++.|++|.+|.+|
T Consensus 167 lv~l-~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~~~-~-----~~----~~~~~D~~~~s~~K~~gp~G 232 (406)
T PRK09295 167 LLAI-THVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMHHP-V-----DV----QALDCDFYVFSGHKLYGPTG 232 (406)
T ss_pred EEEE-ecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccCccc-c-----Cc----hhcCCCEEEeehhhccCCCC
Confidence 7777 899999999876 677888899999999999998643321 1 11 11234588899999888666
Q ss_pred CCcceeEEeecChhhHHHHHHHHhhh------------------hhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHH
Q 015435 260 ERVGALSIVCKTEDVASRVESQLKLV------------------IRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAM 321 (407)
Q Consensus 260 ~r~G~~~~v~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 321 (407)
+|++ +++ +++.+.+....... .+....+++..++.++..+++-.. ....++.
T Consensus 233 --~G~l--~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~-----~~g~~~i 302 (406)
T PRK09295 233 --IGIL--YVK-EALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVS-----ALGLNNI 302 (406)
T ss_pred --cEEE--EEc-hHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHH-----HhCHHHH
Confidence 7888 455 33322221000000 011222556656666665554221 1135667
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcccccC--CceeEEec--CCCHHHHHHhHhhccEEEcCC--------------C--e
Q 015435 322 ADRIISMRQQLFDALSARGTPGDWSHIIK--QIGMFTFT--GLNSEQVAFMTKEYHIYMTSD--------------G--R 381 (407)
Q Consensus 322 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~l~~~gi~~~~g--------------g--R 381 (407)
+++.++.++++.+.|++++. +.+..+ ..+++.|. +.+.+.+...|+++||.+..| + |
T Consensus 303 ~~~~~~l~~~l~~~l~~~~~---~~~~~~~~~~~iv~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iR 379 (406)
T PRK09295 303 AEYEQNLMHYALSQLESVPD---LTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCR 379 (406)
T ss_pred HHHHHHHHHHHHHHHhcCCC---EEEeCCCCCceEEEEEECCcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEE
Confidence 78888899999999987742 444433 24555543 456666777788899999654 2 9
Q ss_pred EEecC-CCCCChhHHHHHHHHHHHhhC
Q 015435 382 ISMAG-LSSKTVPHLTDAIHAAVTRMG 407 (407)
Q Consensus 382 is~~~-~~~e~i~~~~~~l~~~l~~~~ 407 (407)
+|++. .+++|+++++++|+++.+-+|
T Consensus 380 iS~~~ynt~~did~l~~~l~~i~~~~~ 406 (406)
T PRK09295 380 ASLAMYNTHEEVDRLVAGLQRIHRLLG 406 (406)
T ss_pred EEccCCCCHHHHHHHHHHHHHHHHHhC
Confidence 98875 367999999999999866543
No 143
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.94 E-value=3.9e-25 Score=213.11 Aligned_cols=341 Identities=14% Similarity=0.104 Sum_probs=215.0
Q ss_pred cCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCC----CCcHHHHHHHHHHHhCCCCCCCCCCceEE
Q 015435 28 DTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPI----VGLVDFNKLSAKLILGADSPAIKDNRVTT 103 (407)
Q Consensus 28 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~----~g~~~l~~~~a~~~~~~~~~~~~~~~i~~ 103 (407)
..+.++|||..|....+.| ..++.+++++.+++. . ...|... ....++++.+++++ +. ..+++++
T Consensus 33 ~dG~~~id~~~~~~~~~lG-~~~p~v~~a~~~~~~--~--~~~~~~~~~~~~~~~~l~~~l~~~~-~~-----~~~~v~~ 101 (413)
T cd00610 33 VDGNRYLDFLSGIGVLNLG-HNHPEVVEALKEQLA--K--LTHFSLGFFYNEPAVELAELLLALT-PE-----GLDKVFF 101 (413)
T ss_pred CCCCEEEEcCccHHhhccC-CCCHHHHHHHHHHHH--h--CcCccCcccCCHHHHHHHHHHHHhC-CC-----CCCEEEE
Confidence 3578999999875433455 456677887777775 2 1223222 23445556666655 21 2489999
Q ss_pred eecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcC-------------ceeeEEEeecC----CCCCcChh
Q 015435 104 VQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAG-------------LSVKTYRYYDP----ATRGLNFQ 166 (407)
Q Consensus 104 ~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G-------------~~~~~v~~~~~----~~~~~d~~ 166 (407)
++||++|+..+++++..+.++++|++.+++|+++.......+ .+++.+|.+.+ ..+..|++
T Consensus 102 --~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 179 (413)
T cd00610 102 --VNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLE 179 (413)
T ss_pred --cCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHH
Confidence 999999999997766556789999999999998765444321 23455555211 11344889
Q ss_pred hHHHHHHcCCCCcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcE
Q 015435 167 GLLEDLRAAPSGAIVLLHACAHNPTGVDP-TLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245 (407)
Q Consensus 167 ~l~~~i~~~~~~~~v~i~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (407)
.+++.+.+.+....++++...+|++|.++ +.+.+++|.++|++||+++|+||+|.+++..+ .......+ ....+
T Consensus 180 ~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g---~~~~~~~~-~~~~d- 254 (413)
T cd00610 180 ALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTG---KMFAFEHF-GVEPD- 254 (413)
T ss_pred HHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---chhhHhhc-CCCCC-
Confidence 99998874333444455355667779875 77789999999999999999999999875543 11122111 11112
Q ss_pred EEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHH
Q 015435 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRI 325 (407)
Q Consensus 246 i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 325 (407)
+.|+||.++. |+|+||+ +++ +++.+.+ .........+.+.+.+.+.++.+.++... + +...+++
T Consensus 255 --~~t~sK~l~~-g~~~g~~--~~~-~~~~~~~--~~~~~~~~~t~~~~~~~~~a~~a~l~~l~------~--~~~~~~~ 318 (413)
T cd00610 255 --IVTLGKGLGG-GLPLGAV--LGR-EEIMDAF--PAGPGLHGGTFGGNPLACAAALAVLEVLE------E--EGLLENA 318 (413)
T ss_pred --eEEEcccccC-ccccEEE--EEc-HHHHHhh--ccCCCCCCCCCCcCHHHHHHHHHHHHHHH------h--ccHHHHH
Confidence 4588999995 8999999 454 4433332 01222223344667777777776664321 1 2455677
Q ss_pred HHHHHHHHHHHHhcCCC-CCcccccCCceeEEecCC------------CHHHHHHhHhhccEEEcCCC----eEEecC-C
Q 015435 326 ISMRQQLFDALSARGTP-GDWSHIIKQIGMFTFTGL------------NSEQVAFMTKEYHIYMTSDG----RISMAG-L 387 (407)
Q Consensus 326 ~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~gi~~~~gg----Ris~~~-~ 387 (407)
+++.+++.+.++.+... .......+.+ .+.++.+ ....+.+.|.++||.+.|++ |++++. .
T Consensus 319 ~~~~~~l~~~l~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~lR~~~~~~~ 397 (413)
T cd00610 319 AELGEYLRERLRELAEKHPLVGDVRGRG-LMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSGGNVIRLLPPLII 397 (413)
T ss_pred HHHHHHHHHHHHHHHhhCCcEEEeecCc-eEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecCCCEEEEECCCcC
Confidence 77777777777765310 0011123344 4444422 12334455566899999973 887654 4
Q ss_pred CCCChhHHHHHHHHHH
Q 015435 388 SSKTVPHLTDAIHAAV 403 (407)
Q Consensus 388 ~~e~i~~~~~~l~~~l 403 (407)
+++++++++++|++++
T Consensus 398 t~~~i~~~~~~l~~~l 413 (413)
T cd00610 398 TEEEIDEGLDALDEAL 413 (413)
T ss_pred CHHHHHHHHHHHHHhC
Confidence 7899999999998763
No 144
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.94 E-value=2.6e-24 Score=206.14 Aligned_cols=329 Identities=16% Similarity=0.115 Sum_probs=213.3
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhcccccc-----ccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRV-----KEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
++++++|+...+ .|...++.+++++.+++. ..... .-|.......++++++++++ +. +..++
T Consensus 44 ~~~~~~~~sn~y---lgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~g~~~~~~~Le~~la~~~-g~-------~~~l~- 110 (402)
T TIGR01821 44 AKDVTVWCSNDY---LGMGQHPEVLQAMHETLD-KYGAGAGGTRNISGTNIPHVELEAELADLH-GK-------ESALV- 110 (402)
T ss_pred CeeEEEeEccCc---CCCCCCHHHHHHHHHHHH-HcCCCCcchhhhhCCcHHHHHHHHHHHHHh-CC-------CeEEE-
Confidence 367899999988 675667778888888775 21111 01222334678899999888 43 45666
Q ss_pred ecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC-C-CCcEEE
Q 015435 105 QCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA-P-SGAIVL 182 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~-~-~~~~v~ 182 (407)
+++|++++..++.++....+++.|+.....|......+...|.++..++. .|++++++.+... + .+++++
T Consensus 111 -~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~ 182 (402)
T TIGR01821 111 -FTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIA 182 (402)
T ss_pred -ECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEE
Confidence 77779998888544432336666666656666666677777877765543 2667777777532 2 345555
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHH-cCCcEEEEEecCccccccCCC
Q 015435 183 LHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVA-DGGECLVAQSYAKNMGLYGER 261 (407)
Q Consensus 183 i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r 261 (407)
+ ++|+||||.+.+ +++|+++|++||+++|+||+|....++.. .. ....... ..+..++++||||.+|++|
T Consensus 183 ~-e~~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~-g~--g~~~~~~~~~~~div~~t~sKa~g~~G-- 253 (402)
T TIGR01821 183 F-ESVYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPR-GG--GIAERDGLMHRIDIIEGTLAKAFGVVG-- 253 (402)
T ss_pred E-cCCCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCC-CC--ccchhccCCCCCeEEEEechhhhccCC--
Confidence 5 999999999876 78888889999999999999973333211 01 1111111 1234688899999999877
Q ss_pred cceeEEeecChhhHHHHHHHHhhhhhc--ccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015435 262 VGALSIVCKTEDVASRVESQLKLVIRP--MYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSAR 339 (407)
Q Consensus 262 ~G~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 339 (407)
||+ +++ +++ .+.+...... .+.+.++..+.++.+.++... + .+..+++++++++++.+.|++.
T Consensus 254 -G~i--~~~-~~~----~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~------~-~~~~~~~~~~~~~~l~~~L~~~ 318 (402)
T TIGR01821 254 -GYI--AAS-RKL----IDAIRSYAPGFIFTTSLPPAIAAGATASIRHLK------E-SQDLRRAHQENVKRLKNLLEAL 318 (402)
T ss_pred -cee--ecC-HHH----HHHHHHhCcCceecCcCCHHHHHHHHHHHHHhh------c-CHHHHHHHHHHHHHHHHHHHHc
Confidence 887 344 444 4434332222 223456666777776665331 1 1345566778899999999888
Q ss_pred CCCCCcccccCCceeEEec-CC--CH-HHHHHhHhhccEEEcCC-------C----eEEecC-CCCCChhHHHHHHHHHH
Q 015435 340 GTPGDWSHIIKQIGMFTFT-GL--NS-EQVAFMTKEYHIYMTSD-------G----RISMAG-LSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~-~~--~~-~~~~~~l~~~gi~~~~g-------g----Ris~~~-~~~e~i~~~~~~l~~~l 403 (407)
| +++..+.++++.+. +. .. +....+++++||.+.+. | ||++.. .+++|++++++.|++++
T Consensus 319 g----~~~~~~~~~i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~ 394 (402)
T TIGR01821 319 G----IPVIPNPSHIVPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVW 394 (402)
T ss_pred C----CCcCCCCCCEEEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 7 56555666654332 22 12 23445566679998652 2 887753 58899999999999999
Q ss_pred HhhC
Q 015435 404 TRMG 407 (407)
Q Consensus 404 ~~~~ 407 (407)
+++|
T Consensus 395 ~~~~ 398 (402)
T TIGR01821 395 DRLG 398 (402)
T ss_pred HHcC
Confidence 8765
No 145
>PRK07179 hypothetical protein; Provisional
Probab=99.94 E-value=3.8e-24 Score=205.26 Aligned_cols=326 Identities=15% Similarity=0.148 Sum_probs=212.0
Q ss_pred CCCCeeeeeeeeeecCCCccccchhHHHHHHHHhcccccc---ccC-CCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRV---KEY-LPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~y-~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
++..++||+...+ .+....+.+++++.+++.+..... ..+ .......++++.+++++ +. +.+++
T Consensus 52 ~g~~~~~~~~~~Y---L~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~-g~-------~~~~~- 119 (407)
T PRK07179 52 PGPDAIILQSNDY---LNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT-GF-------ESCLL- 119 (407)
T ss_pred CCCcEEEeecCCc---cCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh-CC-------CcEEE-
Confidence 5678899998887 344556677777777775211111 111 11234678888999987 53 56788
Q ss_pred ecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEe
Q 015435 105 QCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLH 184 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~ 184 (407)
++||++|+..+++ ....+||.|++..+.|......+...|.+++.++. .|++++++.+.+. .++++++
T Consensus 120 -~~sG~~An~~~l~--~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~-~~~lV~v- 187 (407)
T PRK07179 120 -CQSGWAANVGLLQ--TIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIERH-GPGIIVV- 187 (407)
T ss_pred -ECCHHHHHHHHHH--HhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHhc-CCeEEEE-
Confidence 9999999999853 34668999999999988888888888888766533 4889999998721 2445555
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcce
Q 015435 185 ACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGA 264 (407)
Q Consensus 185 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 264 (407)
++++||||.+.+ +++|+++|++||+++|+||+|.....+ ..... .+..+.......+++.|+||.++ .|+|+
T Consensus 188 ~~v~n~tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g-~~g~g-~~~~~~~~~~vdi~~~S~sK~~g---~~~G~ 259 (407)
T PRK07179 188 DSVYSTTGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHG-PQGAG-LVAELGLTSRVHFITASLAKAFA---GRAGI 259 (407)
T ss_pred CCCCCCCCcccc---HHHHHHHHHHcCCEEEEECcccccCcC-CCCCc-hHHhcCCCCCCCEEEeechHhhh---ccCeE
Confidence 889999999887 678888899999999999999743332 11111 11112111123588899999986 36899
Q ss_pred eEEeecChhhHHHHHHHHhhhhhc--ccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 015435 265 LSIVCKTEDVASRVESQLKLVIRP--MYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTP 342 (407)
Q Consensus 265 ~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 342 (407)
+ +++ ++ +.+.+...... ...+.+.....++.++++.. ...+..+++++++++++.+.|+++|
T Consensus 260 l--~~~-~~----~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~-------~~~~~~~~~l~~~~~~l~~~L~~~g-- 323 (407)
T PRK07179 260 I--TCP-RE----LAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVI-------ESADDRRARLHANARFLREGLSELG-- 323 (407)
T ss_pred E--EeC-HH----HHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHHHcC--
Confidence 8 455 44 33333322211 11122333233333333321 2234567889999999999999886
Q ss_pred CCcccccCCceeEEecCC----CHHHHHHhHhhccEEE----cCC-----C--eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 343 GDWSHIIKQIGMFTFTGL----NSEQVAFMTKEYHIYM----TSD-----G--RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gi~~----~~g-----g--Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
+.+. ..+.+ .++.+ +.+.+...|.++||.+ .|+ + ||+++. .+++|+++++++|++++++.
T Consensus 324 --~~v~-~~~~i-~~l~~~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 324 --YNIR-SESQI-IALETGSERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred --CCCC-CCCCE-EEEEeCCHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 5544 33443 33322 2345666677789973 332 2 998875 58899999999999998764
No 146
>PLN02242 methionine gamma-lyase
Probab=99.94 E-value=2.3e-24 Score=205.13 Aligned_cols=279 Identities=11% Similarity=0.129 Sum_probs=191.5
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHh-----hcC
Q 015435 73 PIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFT-----LAG 147 (407)
Q Consensus 73 ~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~-----~~G 147 (407)
+.....+|++.++++. +. +.+++ ++||++|+.+++ ...+.+||+|+++.|.|..+...+. ..|
T Consensus 74 ~~Pt~~~LE~~lA~l~-g~-------~~~l~--~~sG~~Ai~~al--~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G 141 (418)
T PLN02242 74 FNPTVLNLGRQMAALE-GT-------EAAYC--TASGMSAISSVL--LQLCSSGGHVVASNTLYGGTHALLAHFLPRKCN 141 (418)
T ss_pred CChhHHHHHHHHHHHh-CC-------CeEEE--EccHHHHHHHHH--HHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccC
Confidence 3556788999999987 53 56778 999999999984 5558899999999999988876653 467
Q ss_pred ceeeEEEeecCCCCCcChhhHHHHHHcCC-CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCC
Q 015435 148 LSVKTYRYYDPATRGLNFQGLLEDLRAAP-SGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASG 226 (407)
Q Consensus 148 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~-~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~ 226 (407)
.+++.++. .|++++++++. + +++++++ ++|+||||.+. ++++|+++|++||++||+|++|..+.+.
T Consensus 142 ~~~~~~d~-------~d~e~l~~~i~--~~~tklV~l-esp~NPtG~v~---dl~~I~~la~~~gi~livDea~~~~~~~ 208 (418)
T PLN02242 142 ITTTFVDI-------TDLEAVKKAVV--PGKTKVLYF-ESISNPTLTVA---DIPELARIAHEKGVTVVVDNTFAPMVLS 208 (418)
T ss_pred ceEEEcCC-------CCHHHHHHhcC--cCCCEEEEE-ecCCCCCCccc---CHHHHHHHHHHhCCEEEEECCCCccCCC
Confidence 77766644 38899999887 4 3677777 89999999976 6889999999999999999999766542
Q ss_pred CCCchhHHHHHHHHcCCcEEEEEecCccccccCCCc-ceeEEeecChhhHHHHHHHHhhhhh--cccCCCChhHHHHHHH
Q 015435 227 SLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERV-GALSIVCKTEDVASRVESQLKLVIR--PMYSSPPIHGASIVAT 303 (407)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 303 (407)
. . . ....++++|+||.++.+|+++ ||+ + .++++.+. +..... ....+++...|.+...
T Consensus 209 ~-----~------~-~g~divv~S~SK~l~g~g~~~gG~i--v-~~~~li~~----l~~~~~~~~~~~g~~~~~~~A~l~ 269 (418)
T PLN02242 209 P-----A------R-LGADVVVHSISKFISGGADIIAGAV--C-GPAELVNS----MMDLHHGALMLLGPTMNPKVAFEL 269 (418)
T ss_pred H-----H------H-cCCcEEEEeCccccCCCCCceEEEE--E-cCHHHHHH----HHHHhhhhhhccCCCCCHHHHHHH
Confidence 1 1 1 124688999999999899885 777 4 44544444 333322 1223445555666665
Q ss_pred HhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc-------------c---cCCceeEEecCCCHHHHHH
Q 015435 304 ILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSH-------------I---IKQIGMFTFTGLNSEQVAF 367 (407)
Q Consensus 304 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-------------~---~~~~~~~~~~~~~~~~~~~ 367 (407)
+.... .+....+++.++++++.+.|++.+....+.- . ...||++.|.--+.+.+.+
T Consensus 270 ~~~l~--------tl~~r~~~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~ 341 (418)
T PLN02242 270 SERLP--------HLSLRMKEHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDTEERANR 341 (418)
T ss_pred HcCCC--------cHHHHHHHHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECCHHHHHH
Confidence 55432 2445667888999999999998752110000 0 1235555543224455555
Q ss_pred hHhhccEE-------EcCC-------------------------C------eEEecCCCCC-ChhHHHHHHHHHHHhh
Q 015435 368 MTKEYHIY-------MTSD-------------------------G------RISMAGLSSK-TVPHLTDAIHAAVTRM 406 (407)
Q Consensus 368 ~l~~~gi~-------~~~g-------------------------g------Ris~~~~~~e-~i~~~~~~l~~~l~~~ 406 (407)
++++..+. +.-| | |||++- | +.+.+++-|+++|+.+
T Consensus 342 f~~~l~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl---E~~~~dli~dl~~al~~~ 416 (418)
T PLN02242 342 LMRYLQNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGY---TGTLEQRWSQFEKALSAM 416 (418)
T ss_pred HHHHhhcccccceeeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecC---CCCHHHHHHHHHHHHHHh
Confidence 55543322 2222 1 888773 7 4999999999999865
No 147
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.94 E-value=2.7e-24 Score=206.06 Aligned_cols=332 Identities=11% Similarity=0.058 Sum_probs=214.8
Q ss_pred cCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 28 DTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 28 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
.+++++||+..|....+.| ...+.+++++.+++. .......+.+.....++.+.++++. +. +.+++ ++
T Consensus 38 ~~g~~~lD~~~~~~~~~~G-h~~~~i~~a~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~-~~-------~~~~~--~~ 105 (401)
T PRK00854 38 TDGNRYLDCLSAYSAVNQG-HCHPKILAAMVEQAG-RLTLTSRAFRNDQLAPLYEELAALT-GS-------HKVLP--MN 105 (401)
T ss_pred CCCCEEEEcCcchhhccCC-CCCHHHHHHHHHHHh-hccccccccCCHHHHHHHHHHHhhC-CC-------CEEEE--eC
Confidence 4578999998886544455 557778888888876 2111111223334556777777754 32 57999 99
Q ss_pred CcccHHHHHHHHHHhhc-------CC-CeEEecCCCCCChHHHHhhcCc-------------eeeEEEeecCCCCCcChh
Q 015435 108 SGTGSLRVGAEFLARHY-------HQ-LTIYIPQPTWGNHPKVFTLAGL-------------SVKTYRYYDPATRGLNFQ 166 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~-------~g-d~Vi~~~p~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~~~d~~ 166 (407)
||++|++.+++++.... +| ++|++..-+|++....+...+. ++..++. .|++
T Consensus 106 SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~ 178 (401)
T PRK00854 106 SGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-------GDAE 178 (401)
T ss_pred CcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-------CCHH
Confidence 99999999987775441 23 6888888777765443332221 1222221 3789
Q ss_pred hHHHHHHcCCCCcEEEEecCCCCCCCCCCC-HHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcE
Q 015435 167 GLLEDLRAAPSGAIVLLHACAHNPTGVDPT-LEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245 (407)
Q Consensus 167 ~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (407)
++++.+. ++++++++ .+|+||||.+++ .+++++|+++|++||+++|+||+|.++++.+ ............+ +
T Consensus 179 ~le~~i~--~~~~aii~-e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g---~~~~~~~~g~~~D-~ 251 (401)
T PRK00854 179 ALEAAIT--PNTVAFLV-EPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTG---KLLAEEHEGIEAD-V 251 (401)
T ss_pred HHHHHhC--CCeEEEEE-ccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc---hHhHHhhcCCCCC-E
Confidence 9999887 56677666 899999999987 4569999999999999999999998877653 1121111111122 2
Q ss_pred EEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHH
Q 015435 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRI 325 (407)
Q Consensus 246 i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 325 (407)
++ ++|.++...+|+||+ +++ + ++.+.+.......+++.+++.+.++.+.|+... + ....+++
T Consensus 252 ~~---~~K~l~gg~~~ig~v--~~~-~----~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~------~--~~~~~~~ 313 (401)
T PRK00854 252 TL---IGKALSGGFYPVSAV--LSN-S----EVLGVLKPGQHGSTFGGNPLACAVARAALKVLT------E--EGMIENA 313 (401)
T ss_pred EE---ecccccCCccCeEEE--EEc-H----HHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHH------H--cCHHHHH
Confidence 22 469887444799999 565 3 344444433333344678888888888776331 1 2356778
Q ss_pred HHHHHHHHHHHHhcCCCCCcccccCCceeEEec--C--CCHHHHHHhHhhccEEEcCCC----eEEec-CCCCCChhHHH
Q 015435 326 ISMRQQLFDALSARGTPGDWSHIIKQIGMFTFT--G--LNSEQVAFMTKEYHIYMTSDG----RISMA-GLSSKTVPHLT 396 (407)
Q Consensus 326 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~l~~~gi~~~~gg----Ris~~-~~~~e~i~~~~ 396 (407)
+++.+++.+.|++++... .....+.+.++.+. + .+...+.+.|.++||.+.+.+ |+++. ..+++++++++
T Consensus 314 ~~~~~~l~~~L~~~~~~~-~~~~~g~g~~~~i~~~~~~~~~~~~~~~L~~~GV~v~~~~~~~lR~~p~~~~t~e~i~~~i 392 (401)
T PRK00854 314 AEMGAYFLEGLRSIRSNI-VREVRGRGLMLAVELEPEAGGARQYCEALKERGLLAKDTHDHTIRLAPPLVITREQVDWAL 392 (401)
T ss_pred HHHHHHHHHHHHhhccCc-eEEEeccceEEEEEEecCchhHHHHHHHHHHCCeEEecCCCCEEEEeCCcccCHHHHHHHH
Confidence 888899999998875210 11224456655542 2 123334444445799998653 78764 25889999999
Q ss_pred HHHHHHHH
Q 015435 397 DAIHAAVT 404 (407)
Q Consensus 397 ~~l~~~l~ 404 (407)
++|++++.
T Consensus 393 ~~l~~~l~ 400 (401)
T PRK00854 393 EQIAKVLA 400 (401)
T ss_pred HHHHHHhh
Confidence 99998874
No 148
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.94 E-value=6.9e-24 Score=203.66 Aligned_cols=329 Identities=16% Similarity=0.116 Sum_probs=208.3
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhcccccc-----ccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRV-----KEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
+++.++|+...+ .|...++.+++++.+++. ..... ..|.+.....++++++++++ +. +..++
T Consensus 45 ~~~~~~~~s~dy---lgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~g~~~~~~~l~~~la~~~-g~-------~~~~~- 111 (407)
T PRK09064 45 EREVTVWCSNDY---LGMGQHPKVIEAMIEALD-RCGAGAGGTRNISGTNHYHVELERELADLH-GK-------EAALV- 111 (407)
T ss_pred CceEEEEECCCC---cCCCCCHHHHHHHHHHHH-HcCCCCCCcCcCccCHHHHHHHHHHHHHHh-CC-------CcEEE-
Confidence 467899998876 675666677777777665 11111 11334445778899999877 42 34455
Q ss_pred ecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC--CCCcEEE
Q 015435 105 QCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA--PSGAIVL 182 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~--~~~~~v~ 182 (407)
.++|++++..++..+....+++.|+.....|......+...|.++..++. .|++++++.+... +++++++
T Consensus 112 -~~sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~ 183 (407)
T PRK09064 112 -FTSGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIA 183 (407)
T ss_pred -ECcHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEE
Confidence 55666787776544432336666666656666666666777777655543 3677888777632 2345555
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHc-CCcEEEEEecCccccccCCC
Q 015435 183 LHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVAD-GGECLVAQSYAKNMGLYGER 261 (407)
Q Consensus 183 i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r 261 (407)
+ ++++||+|.+.+ +++|.++|++||++||+||+|....++.. .. .+...... .+..++++||||.||++|
T Consensus 184 ~-~~v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~-g~--g~~~~~~~~~~~div~~t~sKa~g~~G-- 254 (407)
T PRK09064 184 F-ESVYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPR-GG--GIAERDGLMDRIDIIEGTLAKAFGVMG-- 254 (407)
T ss_pred E-eCCCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCC-CC--ChHHhcCCCCCCeEEEEecchhhhccC--
Confidence 5 899999999775 78888889999999999999973322211 11 11111111 234788999999999877
Q ss_pred cceeEEeecChhhHHHHHHHHhhhhhcc--cCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015435 262 VGALSIVCKTEDVASRVESQLKLVIRPM--YSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSAR 339 (407)
Q Consensus 262 ~G~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 339 (407)
||+ ++ ++++.+. +......+ ..+.++.++.++.+.++.. +.....+++++++++++.+.|++.
T Consensus 255 -G~~--~~-~~~~~~~----l~~~~~~~~~t~~~~~~~~~aa~~al~~~-------~~~~~~~~~~~~~~~~l~~~L~~~ 319 (407)
T PRK09064 255 -GYI--AG-SAALVDA----VRSYAPGFIFTTSLPPAIAAAALASIRHL-------KESNEERERHQERAAKLKAALDAA 319 (407)
T ss_pred -ceE--ec-CHHHHHH----HHHhCccccccCcCCHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHHHc
Confidence 888 44 4444443 33322221 2244555566665555422 112344678889999999999988
Q ss_pred CCCCCcccccCCceeEEec-CC--CH-HHHHHhHhhccEEEcCC-------C----eEEecC-CCCCChhHHHHHHHHHH
Q 015435 340 GTPGDWSHIIKQIGMFTFT-GL--NS-EQVAFMTKEYHIYMTSD-------G----RISMAG-LSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~-~~--~~-~~~~~~l~~~gi~~~~g-------g----Ris~~~-~~~e~i~~~~~~l~~~l 403 (407)
| +++..+.++++.+. +- .. +...++++++||.+.+. | ||+++. .+++|++++++.|++++
T Consensus 320 g----~~~~~~~~~iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~ 395 (407)
T PRK09064 320 G----IPVMPNESHIVPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVW 395 (407)
T ss_pred C----CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 7 56555555543322 22 22 23445666679998642 2 888764 47899999999999998
Q ss_pred HhhC
Q 015435 404 TRMG 407 (407)
Q Consensus 404 ~~~~ 407 (407)
++++
T Consensus 396 ~~~~ 399 (407)
T PRK09064 396 ARLG 399 (407)
T ss_pred HHcC
Confidence 7654
No 149
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.94 E-value=6.2e-24 Score=200.69 Aligned_cols=283 Identities=15% Similarity=0.104 Sum_probs=185.8
Q ss_pred CcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEe
Q 015435 76 GLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRY 155 (407)
Q Consensus 76 g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~ 155 (407)
-+.++++.+++++ +. +++++ |+|+++++.+++ ...+.+||+|+++.++|.+....++..|++++.++.
T Consensus 45 ~~~~l~~~la~~~-g~-------~~i~~--~~g~t~al~~~l--~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~ 112 (361)
T cd06452 45 PIKDFHHDLAEFL-GM-------DEARV--TPGAREGKFAVM--HSLCEKGDWVVVDGLAHYTSYVAAERAGLNVREVPN 112 (361)
T ss_pred hHHHHHHHHHHHc-CC-------ceEEE--eCCHHHHHHHHH--HHhcCCCCEEEEcCCcchHHHHHHHhcCCEEEEEec
Confidence 4678899999987 53 68999 999999999884 444789999999999888777788899999999998
Q ss_pred ecCCCCCcChhhHHHHHHcC-----CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCc
Q 015435 156 YDPATRGLNFQGLLEDLRAA-----PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDA 230 (407)
Q Consensus 156 ~~~~~~~~d~~~l~~~i~~~-----~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~ 230 (407)
+.+.++.+|++.+++.+.+. ++++++++ ++|+||||.. .++++|+++|+++|+++|+|++|...... .
T Consensus 113 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l-~~p~n~tG~~---~~~~~i~~~~~~~~~~vivD~a~~~g~~~-~-- 185 (361)
T cd06452 113 TGHPEYHITPEGYAEVIEEVKDEFGKPPALALL-THVDGNYGNL---HDAKKIAKVCHEYGVPLLLNGAYTVGRMP-V-- 185 (361)
T ss_pred CCCCCcccCHHHHHHHHHHHhhccCCCceEEEE-ECCCCCCeee---ccHHHHHHHHHHcCCeEEEECCcccCCcC-C--
Confidence 42223589999999988631 24566666 8999999985 56889999999999999999998743211 1
Q ss_pred hhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcc--------cCCCChhHHHHHH
Q 015435 231 DAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPM--------YSSPPIHGASIVA 302 (407)
Q Consensus 231 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 302 (407)
... ..+..++++|++|.++ ++.|+||+ +++ +++.+ ++......+ ..+.....+..+.
T Consensus 186 ---~~~----~~~~d~~~~s~~K~l~-~~~~~G~l--~~~-~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
T cd06452 186 ---SGK----ELGADFIVGSGHKSMA-ASAPIGVL--ATT-EEWAD----IVFRTSQMFKIKEVELLGCTLRGAPLVTLM 250 (361)
T ss_pred ---CHH----HcCCCEEEecCCcccc-CCCCeEEE--EEC-HHHHH----HHhccccccccceeeeeccccCchHHHHHH
Confidence 111 1235689999999998 45699998 455 44333 333322111 0111111222233
Q ss_pred HHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCcccc---cCCceeEEec--CC---------CHHHHHH
Q 015435 303 TILKDSTMYKEWTLELKAMADRIISMRQQLFDALSAR-GTPGDWSHI---IKQIGMFTFT--GL---------NSEQVAF 367 (407)
Q Consensus 303 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~---~~~~~~~~~~--~~---------~~~~~~~ 367 (407)
..++.. .+..+.. ++..++++++.+.|+++ | +++. ....++..+. ++ ....+.+
T Consensus 251 ~al~~~------~~~~~~~-~~~~~~~~~l~~~L~~l~g----~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (361)
T cd06452 251 ASFPHV------KERVKRW-DEEVEKARWFVAELEKIEG----IKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYS 319 (361)
T ss_pred HHHHHH------HHHHHHH-HHHHHHHHHHHHHHhcCCC----eEEECCCCCCCceEEEEcCCcchhhhhccccchhHHH
Confidence 222211 1223222 22334557888999887 5 5543 2222332221 11 1113445
Q ss_pred hHhhccEEEcCCC-----eEEecCCCCCChhHHHHHHHHHH
Q 015435 368 MTKEYHIYMTSDG-----RISMAGLSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 368 ~l~~~gi~~~~gg-----Ris~~~~~~e~i~~~~~~l~~~l 403 (407)
.|.++||.+...| |++..+.++++++.++++|+++.
T Consensus 320 ~L~~~gI~~~~~~~~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 320 ELKKRGIHGIKPGLTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred HHHHcCceEEcCCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 5555799975544 78774458899999999998764
No 150
>PRK07049 methionine gamma-lyase; Validated
Probab=99.94 E-value=1.3e-23 Score=200.79 Aligned_cols=283 Identities=15% Similarity=0.135 Sum_probs=196.8
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHH----hhcCc
Q 015435 73 PIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVF----TLAGL 148 (407)
Q Consensus 73 ~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~----~~~G~ 148 (407)
+......|++.++++. +. +++++ ++||++++.++ +...+.+||.|++++|.|..+...+ ...|+
T Consensus 81 ~~Pt~~~Le~~lA~le-g~-------~~~iv--~~sG~~Ai~~~--l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi 148 (427)
T PRK07049 81 NHPNSEIVEDRLAVYE-GA-------ESAAL--FSSGMSAIATT--LLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGV 148 (427)
T ss_pred CCcCHHHHHHHHHHHh-CC-------CcEEE--EccHHHHHHHH--HHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCc
Confidence 4556789999999988 43 67888 99999999888 4556889999999999999997764 46788
Q ss_pred eeeEEEeecCCCCCcChhhHHHHHHc---CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHH---cCceeeecccccc
Q 015435 149 SVKTYRYYDPATRGLNFQGLLEDLRA---APSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRS---KGLLPFFDSAYQG 222 (407)
Q Consensus 149 ~~~~v~~~~~~~~~~d~~~l~~~i~~---~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~---~~~~li~D~~y~~ 222 (407)
+++.++. +.|++.+++.+.+ .++++++++ ++|+||||.+++.+++.+|++.|.+ +++++|+|++|..
T Consensus 149 ~~v~~~~------~~d~~~l~~~l~~~~~~~~tklv~l-esP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~ 221 (427)
T PRK07049 149 GAVGFAD------GLSEAAIGAAAEAAAAKGRVSLILI-ETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLG 221 (427)
T ss_pred EEEEEeC------CCCHHHHHHHHHhhccCCCceEEEE-ECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccc
Confidence 8777752 2467778777642 135677777 8999999999999999999888754 6899999999865
Q ss_pred ccCCCCCchhHHHHHHHHcCCcEEEEEecCcccc-ccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHH
Q 015435 223 FASGSLDADAQSVRMFVADGGECLVAQSYAKNMG-LYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIV 301 (407)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (407)
..... ++ . ....+++.|+||.++ .+|+|+||+ +++ ++ +.+.+.........+.+...+.++
T Consensus 222 ~~~~~------pl----~-~g~divv~S~SK~~gG~~glr~G~v--v~~-~~----l~~~l~~~~~~~g~~ls~~~a~l~ 283 (427)
T PRK07049 222 PVFQK------PL----E-HGADLSVYSLTKYVGGHSDLVAGAV--LGR-KA----LIRQVRALRSAIGTQLDPHSCWML 283 (427)
T ss_pred cccCC------cc----c-cCCCEEEEcCceeecCCCCcEEEEE--ECC-HH----HHHHHHHHHHhcCCCCCHHHHHHH
Confidence 54321 11 1 234688899999999 699999999 444 44 444444454444556777778877
Q ss_pred HHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc-----------------cCCceeEEec-CCCHH
Q 015435 302 ATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHI-----------------IKQIGMFTFT-GLNSE 363 (407)
Q Consensus 302 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-----------------~~~~~~~~~~-~~~~~ 363 (407)
...++. +....++..++++.+.+.|++.+.-..+.+. ...||++.+. .-+.+
T Consensus 284 ~r~L~t----------l~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~~~~ 353 (427)
T PRK07049 284 GRSLET----------LVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKGGQA 353 (427)
T ss_pred HcCCCh----------HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcCCHH
Confidence 766653 3344455688889999999876420000000 1235666654 22445
Q ss_pred HHHHhHhhccEEEc---CC-------------------------C------eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 364 QVAFMTKEYHIYMT---SD-------------------------G------RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 364 ~~~~~l~~~gi~~~---~g-------------------------g------Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
.+.++++...+... =| | |||++- |+.+.+++-|.++|+.
T Consensus 354 ~~~~f~~~l~l~~~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~ 426 (427)
T PRK07049 354 AAFRFLNALQIFKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESTIRLSIGI---EHPDDLIADLAQALDA 426 (427)
T ss_pred HHHHHHHcCcccEEcccCCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCc---CCHHHHHHHHHHHHhc
Confidence 55556555444331 11 1 888773 8899999999998863
No 151
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.93 E-value=6.5e-24 Score=201.99 Aligned_cols=331 Identities=14% Similarity=0.087 Sum_probs=211.2
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccc------cccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSR------VKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
+++|||.--. ..| |.+..+++++.+... .... ...+.....+.++++.+++++ +. +++++
T Consensus 18 ~~~~~~~~~~---~~~-p~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~-g~-------~~~~~- 83 (387)
T PRK09331 18 EEFINLDPIQ---RGG-ILTPEARKALIEYGD-GYSVCDYCPGRLDQIKKPPIADFHEDLAEFL-GM-------DEARV- 83 (387)
T ss_pred ccccccChhh---cCC-CCCHHHHHHHHHHHh-ccCCCcccccccccccChHHHHHHHHHHHHh-CC-------CcEEE-
Confidence 5677776322 245 777777777766653 1111 111222335889999999988 54 57888
Q ss_pred ecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC-----CCCc
Q 015435 105 QCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA-----PSGA 179 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~-----~~~~ 179 (407)
|+|+++++.+++ ...+.+||+|+++.++|......++..|++++.++...++++.+|++.+++.+.+. ++++
T Consensus 84 -~~g~t~a~~~al--~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 160 (387)
T PRK09331 84 -THGAREGKFAVM--HSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPA 160 (387)
T ss_pred -eCCHHHHHHHHH--HHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCE
Confidence 999999999884 44578999999999998888888889999999998732345779999999998742 2456
Q ss_pred EEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccC
Q 015435 180 IVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYG 259 (407)
Q Consensus 180 ~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 259 (407)
++++ ++|+||||.+ .++++|+++|++||+++++|++|+..... . + .. ..+..+++.|++|.++ .+
T Consensus 161 lV~l-~~~~~~tG~~---~~l~~I~~la~~~g~~livD~a~~~g~~~-~--~---~~----~~g~D~~~~s~~K~l~-~~ 225 (387)
T PRK09331 161 LALL-THVDGNYGNL---ADAKKVAKVAHEYGIPFLLNGAYTVGRMP-V--D---GK----KLGADFIVGSGHKSMA-AS 225 (387)
T ss_pred EEEE-ECCCCCCccc---ccHHHHHHHHHHcCCEEEEECCcccCCcC-C--C---HH----HcCCCEEEeeCccccc-CC
Confidence 6666 8899999984 46889999999999999999998643211 1 1 11 1234688999999998 45
Q ss_pred CCcceeEEeecChhhHHHHHHHHhhhh----hcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHH
Q 015435 260 ERVGALSIVCKTEDVASRVESQLKLVI----RPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDA 335 (407)
Q Consensus 260 ~r~G~~~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 335 (407)
.|+|++ +++ +++.+.+......+. .....+.+.....++...++. +.+.. +..++..++++++.+.
T Consensus 226 ~~~G~l--~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~------~~~~~-~~~~~~~~~~~~l~~~ 295 (387)
T PRK09331 226 APSGVL--ATT-EEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPH------VVERV-KRWDEEVKKARWFVDE 295 (387)
T ss_pred CCEEEE--EEC-HHHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHH------HHHHH-HHHHHHHHHHHHHHHH
Confidence 689998 454 443333322111000 001111221122222222221 11222 2345556777899999
Q ss_pred HHhc-CCCCCccccc---CCceeEEe--cCC---------CHHHHHHhHhhccEEEcCCC-----eEEecCCCCCChhHH
Q 015435 336 LSAR-GTPGDWSHII---KQIGMFTF--TGL---------NSEQVAFMTKEYHIYMTSDG-----RISMAGLSSKTVPHL 395 (407)
Q Consensus 336 l~~~-~~~~~~~~~~---~~~~~~~~--~~~---------~~~~~~~~l~~~gi~~~~gg-----Ris~~~~~~e~i~~~ 395 (407)
|+++ | +++.. ...++..+ ..+ +...+.+.|.++||...+.+ |+...+.++++++++
T Consensus 296 L~~l~g----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~i~ri~~~g~t~~di~~l 371 (387)
T PRK09331 296 LEKIEG----FKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGIKPGATKEFKLSTYGLTWEQVEYV 371 (387)
T ss_pred HhcCCC----EEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEEccCCceEEEEEeccCCHHHHHHH
Confidence 9988 5 55442 22222211 111 11335555667899854433 665533588999999
Q ss_pred HHHHHHHHHhhC
Q 015435 396 TDAIHAAVTRMG 407 (407)
Q Consensus 396 ~~~l~~~l~~~~ 407 (407)
+++|+++++++|
T Consensus 372 ~~aL~~i~~~~~ 383 (387)
T PRK09331 372 ADAFKEIAEKYG 383 (387)
T ss_pred HHHHHHHHHhcC
Confidence 999999988754
No 152
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.93 E-value=9.3e-24 Score=200.22 Aligned_cols=320 Identities=15% Similarity=0.130 Sum_probs=209.2
Q ss_pred cccchhHHHHHHHHhccccccccCCC--CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcC
Q 015435 48 PLVLNVVRKAEQLLVNDQSRVKEYLP--IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~y~~--~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~ 125 (407)
|.|....+++.+++. ... ..+.+ ..-..++|+.+++++ +... ..+.+++ |+|||+++..++ .....+
T Consensus 11 pgP~~~~~~~~~a~~-~~~--~~~~~~~~~~~~~~~~~l~~l~-~~~~---~~~~i~~--~~~gt~~l~~~~--~~l~~~ 79 (368)
T PRK13479 11 PGPLTTSRTVREAML-RDW--GSWDDDFNALTASVRAKLVAIA-TGEE---GYTCVPL--QGSGTFSVEAAI--GSLVPR 79 (368)
T ss_pred CCCCCCCHHHHHHhC-CCC--CCCChHHHHHHHHHHHHHHHHh-CCCC---CceEEEE--cCCcHHHHHHHH--HhccCC
Confidence 666667777777775 221 22222 234678888888887 4311 1245778 999999999994 555678
Q ss_pred CCeEEecCCCCCCh--HHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHH
Q 015435 126 QLTIYIPQPTWGNH--PKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQI 203 (407)
Q Consensus 126 gd~Vi~~~p~y~~~--~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i 203 (407)
||+|++++++|.+. ...++..|++++.++. +.++.+|++++++.+++.++.+++++ ++++||||...+ +++|
T Consensus 80 ~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~--~~~~~~d~~~l~~~l~~~~~~~~v~~-~~~~~~tG~~~~---~~~i 153 (368)
T PRK13479 80 DGKVLVPDNGAYGARIAQIAEYLGIAHVVLDT--GEDEPPDAAEVEAALAADPRITHVAL-VHCETTTGILNP---LDEI 153 (368)
T ss_pred CCeEEEEeCCchHHHHHHHHHHcCCcEEEEEC--CCCCCCCHHHHHHHHHhCCCCcEEEE-EcccCccccccC---HHHH
Confidence 99999998887665 3677889999999998 33467899999999874444556666 899999999876 6788
Q ss_pred HHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccc-cccCCCcceeEEeecChhhHHHHHHHH
Q 015435 204 RQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNM-GLYGERVGALSIVCKTEDVASRVESQL 282 (407)
Q Consensus 204 ~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~v~~~~~~~~~~~~~~ 282 (407)
+++|+++|+++|+|+ ++.++..+ ..+ ... +..+++.|++|.+ +.+| +||+ +++ ++..+.+....
T Consensus 154 ~~l~~~~~~~livDa-~~~~g~~~-----~~~---~~~-~~d~~v~s~~K~l~g~~G--~G~l--~~~-~~~~~~~~~~~ 218 (368)
T PRK13479 154 AAVAKRHGKRLIVDA-MSSFGAIP-----IDI---AEL-GIDALISSANKCIEGVPG--FGFV--IAR-RSELEACKGNS 218 (368)
T ss_pred HHHHHHcCCEEEEEc-ccccCCcc-----ccc---ccc-CceEEEecCccccccCCC--ceEE--EEC-HHHHHHhhcCC
Confidence 888999999999996 44554321 111 111 2336668999965 6677 5998 455 44333332211
Q ss_pred hh--------h-----hhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc
Q 015435 283 KL--------V-----IRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHII 349 (407)
Q Consensus 283 ~~--------~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 349 (407)
.. . ......+++...+.++..+++... + ....++.++++.++++++.+.|++.| +....
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~--~--~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~ 290 (368)
T PRK13479 219 RSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELE--E--EGGVPARGARYANNQRTLVAGMRALG----FEPLL 290 (368)
T ss_pred CCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHH--H--hhCHHHHHHHHHHHHHHHHHHHHHcC----CcccC
Confidence 00 0 011112455555555544443211 0 01256677889999999999999887 44322
Q ss_pred C-----CceeEEecC----CCHHHHHHhHhhccEEEcCCC-------eEEe-cCCCCCChhHHHHHHHHHHHhhC
Q 015435 350 K-----QIGMFTFTG----LNSEQVAFMTKEYHIYMTSDG-------RISM-AGLSSKTVPHLTDAIHAAVTRMG 407 (407)
Q Consensus 350 ~-----~~~~~~~~~----~~~~~~~~~l~~~gi~~~~gg-------Ris~-~~~~~e~i~~~~~~l~~~l~~~~ 407 (407)
+ .+....+.. .+.+.+.+.|.++||.+.++. |++. +..+++++++++++|+++++++|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~~ 365 (368)
T PRK13479 291 DAEIQSPIIVTFHAPADPAYDFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYWMG 365 (368)
T ss_pred CchhcCceEEEEECCCCCCcCHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 2 111222222 345566666666899998762 9975 55688999999999999998765
No 153
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.93 E-value=6.5e-24 Score=204.09 Aligned_cols=348 Identities=10% Similarity=0.075 Sum_probs=223.8
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC 106 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t 106 (407)
...++.++|+..|....+.| ..++.+.+++.+++. .. .+.+.+..+.+.. .++++.+....+... .+.+++ +
T Consensus 37 d~dG~~~lD~~~g~~~~~lG-h~~~~i~~a~~~~~~--~~-~~~~~~~~~~~~~-~~la~~l~~~~~~~~-~~~~~f--~ 108 (425)
T PRK08088 37 DVEGREYLDFAGGIAVLNTG-HLHPKVVAAVEAQLK--KL-SHTCFQVLAYEPY-LELCEKMNQKVPGDF-AKKTLL--V 108 (425)
T ss_pred eCCCCEEEEcCCchhhcCCC-CCCHHHHHHHHHHHh--hC-CCccccccCCHHH-HHHHHHHHHhCCCCC-CCEEEE--e
Confidence 34678999999987655566 567788888877775 21 1222222223332 345555533221111 157888 9
Q ss_pred CCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceee--------------EEEeecCCCCCcC----hhhH
Q 015435 107 LSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVK--------------TYRYYDPATRGLN----FQGL 168 (407)
Q Consensus 107 ~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~--------------~v~~~~~~~~~~d----~~~l 168 (407)
++|++|++.++++...+.....|+..+++|++....+...+.... .++...+. .+.+ ++.+
T Consensus 109 ~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~l 187 (425)
T PRK08088 109 TTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPL-HGVSEDDAIASI 187 (425)
T ss_pred CCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccc-cCccHHHHHHHH
Confidence 999999999998877766667788889999988766655433211 11110011 1122 4567
Q ss_pred HHHHHc---CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcE
Q 015435 169 LEDLRA---APSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245 (407)
Q Consensus 169 ~~~i~~---~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (407)
++.+.. .....++++.+..+|++....+.+.+++|.++|++||+++|+||+|.++.+.+ ...+.... ...
T Consensus 188 ~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g---~~~~~~~~----~~~ 260 (425)
T PRK08088 188 ERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTG---TLFAMEQM----GVA 260 (425)
T ss_pred HHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---chhHHhhc----CCC
Confidence 777752 23456777777778888888999999999999999999999999999877643 22222221 223
Q ss_pred EEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHH
Q 015435 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRI 325 (407)
Q Consensus 246 i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 325 (407)
.-+.||||.++ +|+|+||+ +++ ..+.+.+.......+.+++++.|.++..+++... ..+.+++.++..
T Consensus 261 pdi~s~sK~l~-~G~rig~v--~~~-----~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~ 328 (425)
T PRK08088 261 ADLTTFAKSIA-GGFPLAGV--TGR-----AEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFE----QENLLQKANALG 328 (425)
T ss_pred CCEEEEecccc-CCCcceee--Eec-----HHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHH----hcCHHHHHHHHH
Confidence 44789999999 89999999 565 4455555444445566788899999999887542 123344455544
Q ss_pred HHHHHHHHHHHHhcCCCCCcccccCCceeEEecCC----C--------HHHHHHhHhhccEEEcCCC------eEEecC-
Q 015435 326 ISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL----N--------SEQVAFMTKEYHIYMTSDG------RISMAG- 386 (407)
Q Consensus 326 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~--------~~~~~~~l~~~gi~~~~gg------Ris~~~- 386 (407)
+++++.+.+.....+. +...... |++.|+.+ + ...+...+.++||.+.+++ |++++.
T Consensus 329 ~~~~~~l~~l~~~~~~---~~~v~g~-G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~~~~iRl~~~~~ 404 (425)
T PRK08088 329 EKLKDGLLAIAEKHPE---IGDVRGL-GAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPYYNVLRILVPLT 404 (425)
T ss_pred HHHHHHHHHHHHhCCC---eEEEecc-ceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECCCC
Confidence 4444444444333331 2222222 67777755 1 2234444455898887753 888874
Q ss_pred CCCCChhHHHHHHHHHHHhh
Q 015435 387 LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 387 ~~~e~i~~~~~~l~~~l~~~ 406 (407)
.+++++++++++|+++++..
T Consensus 405 ~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 405 IEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred cCHHHHHHHHHHHHHHHHhh
Confidence 57899999999999998764
No 154
>PRK02948 cysteine desulfurase; Provisional
Probab=99.93 E-value=2.3e-24 Score=205.32 Aligned_cols=287 Identities=15% Similarity=0.160 Sum_probs=196.7
Q ss_pred cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHh--hcCCCeEEecCCCCCChHH---HHhhcCceee
Q 015435 77 LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLAR--HYHQLTIYIPQPTWGNHPK---VFTLAGLSVK 151 (407)
Q Consensus 77 ~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~--~~~gd~Vi~~~p~y~~~~~---~~~~~G~~~~ 151 (407)
++++|+.+++++ +. ++++|++ |+|+|+++..++..+.. ..+||.|+++...|+.+.. .++..|.+++
T Consensus 45 ~~~~r~~la~~~-g~-----~~~~i~~--~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~ 116 (381)
T PRK02948 45 LQVCRKTFAEMI-GG-----EEQGIYF--TSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVT 116 (381)
T ss_pred HHHHHHHHHHHh-CC-----CCCeEEE--eCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEE
Confidence 567788888887 42 2478999 99999999887533321 1478999999877766544 4567799999
Q ss_pred EEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCch
Q 015435 152 TYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDAD 231 (407)
Q Consensus 152 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~ 231 (407)
.++++ .++.+|++++++.+. ++++++++ ++|+||||++.+ +++|.++|+++|+++++|++ ..+...+. +
T Consensus 117 ~v~~~--~~~~~d~~~l~~~l~--~~~~lv~~-~~~~n~tG~~~~---~~~I~~l~~~~~~~vivD~~-~~~g~~~~--~ 185 (381)
T PRK02948 117 EIPVD--KSGLIRLVDLERAIT--PDTVLASI-QHANSEIGTIQP---IAEIGALLKKYNVLFHSDCV-QTFGKLPI--D 185 (381)
T ss_pred EEeeC--CCCCCCHHHHHHhcC--CCCEEEEE-ECCcCCcEeehh---HHHHHHHHHHcCCEEEEECh-hhcccccc--C
Confidence 99983 346789999999886 55666666 999999999875 67888889999999999975 44443211 1
Q ss_pred hHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHh---hhhhcccCCCChhHHHHHHHHhcCh
Q 015435 232 AQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLK---LVIRPMYSSPPIHGASIVATILKDS 308 (407)
Q Consensus 232 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~ 308 (407)
+ ......+++.|++|.+|.+| +|++ +++ ++. .+..... ...+...++++.+++.++..+++..
T Consensus 186 ---~----~~~~~d~~~~s~~K~~gp~G--~G~l--~~~-~~~--~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~ 251 (381)
T PRK02948 186 ---V----FEMGIDSLSVSAHKIYGPKG--VGAV--YIN-PQV--RWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENI 251 (381)
T ss_pred ---c----ccCCCCEEEecHHhcCCCCc--EEEE--EEc-CCC--CCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHH
Confidence 1 12245678899999999888 6887 344 221 0100000 0011123467777788777777643
Q ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCC------cee--EEecCCCHHHHHHhHhhccEEEcC--
Q 015435 309 TMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQ------IGM--FTFTGLNSEQVAFMTKEYHIYMTS-- 378 (407)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~l~~~gi~~~~-- 378 (407)
. +..++.++++++.++++.+.|++++ +.+.... ..+ |...+++.+.+...|+++||.+..
T Consensus 252 ~------~~~~~~~~~~~~~~~~l~~~L~~~~----~~v~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~gI~v~~g~ 321 (381)
T PRK02948 252 L------KNMQEESLRFKELRSYFLEQIQTLP----LPIEVEGHSTSCLPHIIGVTIKGIEGQYTMLECNRRGIAISTGS 321 (381)
T ss_pred H------HHHHHHHHHHHHHHHHHHHHHhcCC----CCEEEeCCCccCcCCEEEEEeCCCCHHHHHHhcccCCEEEEchH
Confidence 2 3467778999999999999999887 3222111 111 122345666555556778999973
Q ss_pred -----------------------CC--eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 379 -----------------------DG--RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 379 -----------------------gg--Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
.+ |||++. .+++|++++++.|+++++.+
T Consensus 322 ~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 375 (381)
T PRK02948 322 ACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQF 375 (381)
T ss_pred hcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 12 899875 47899999999999988653
No 155
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.93 E-value=1.2e-23 Score=200.88 Aligned_cols=324 Identities=13% Similarity=0.083 Sum_probs=209.3
Q ss_pred cccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCC
Q 015435 48 PLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQL 127 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd 127 (407)
|.|..+.+++.+++. ......+ ..+..++++.+++.+....+.. .++.+++ ++++|++++.++ ...+.+||
T Consensus 15 pGP~~~~~~V~~a~~--~~~~~~~--~~~~~~~~~~~~~~l~~~~g~~-~~~~vi~--~~~gt~a~~~a~--~~~~~~Gd 85 (401)
T PLN02409 15 PGPVNIPERVLRAMN--RPNEDHR--SPAFPALTKELLEDVKYIFKTK-SGTPFIF--PTTGTGAWESAL--TNTLSPGD 85 (401)
T ss_pred CCCCCCCHHHHHHhc--CCCCCCC--CHHHHHHHHHHHHHHHHHhCCC-CCCEEEE--eCCcHHHHHHHH--HhcCCCCC
Confidence 556666666666665 2122222 2344444444444442222211 1245777 889999998884 45578999
Q ss_pred eEEecCCCCCCh--HHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC--CCCcEEEEecCCCCCCCCCCCHHHHHHH
Q 015435 128 TIYIPQPTWGNH--PKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA--PSGAIVLLHACAHNPTGVDPTLEQWEQI 203 (407)
Q Consensus 128 ~Vi~~~p~y~~~--~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~--~~~~~v~i~~~p~NPtG~~~~~~~l~~i 203 (407)
+|+++++.|.+. ...++..|.+++.++. +.+..+|++++++.+++. ++++++++ ++++||||.+++.+++.++
T Consensus 86 ~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~--~~~~~~~~~~l~~~l~~~~~~~~k~v~~-~~~~~~tG~~~~~~~i~~l 162 (401)
T PLN02409 86 KVVSFRIGQFSLLWIDQMQRLNFDVDVVES--PWGQGADLDILKSKLRQDTNHKIKAVCV-VHNETSTGVTNDLAGVRKL 162 (401)
T ss_pred EEEEeCCCchhHHHHHHHHHcCCceEEEEC--CCCCCCCHHHHHHHHhhCcCCCccEEEE-EeecccccccCCHHHHHHH
Confidence 999999888665 4667788999999998 334568999999999842 25677776 7889999999986666666
Q ss_pred HHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHH-
Q 015435 204 RQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQL- 282 (407)
Q Consensus 204 ~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~- 282 (407)
++ |+++|+++|+|++++ +...+. .+ ...+..+++.|.+|.++.| .++||+ +.+ ++..+++....
T Consensus 163 ~~-~~~~g~~~vvD~v~s-~g~~~i-----d~----~~~~~D~~~~s~~K~l~~P-~G~G~l--~~~-~~~~~~~~~~~~ 227 (401)
T PLN02409 163 LD-CAQHPALLLVDGVSS-IGALDF-----RM----DEWGVDVALTGSQKALSLP-TGLGIV--CAS-PKALEASKTAKS 227 (401)
T ss_pred Hh-hhccCcEEEEEcccc-cCCccc-----cc----cccCccEEEEcCccccCcC-CCccee--EEC-HHHHHHHhcCCC
Confidence 66 999999999999875 222111 11 1113347777779998754 368999 455 44433332100
Q ss_pred ----------hhhhh---cccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc
Q 015435 283 ----------KLVIR---PMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHII 349 (407)
Q Consensus 283 ----------~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 349 (407)
..... ....+++...+.++..+++... ....++.+++++++++++.+.|++.| +....
T Consensus 228 ~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~-----~~G~e~i~~~~~~l~~~l~~~L~~~g----~~~~~ 298 (401)
T PLN02409 228 PRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIF-----EEGLENVIARHARLGEATRLAVEAWG----LKLCT 298 (401)
T ss_pred CCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHH-----HhhHHHHHHHHHHHHHHHHHHHHHcC----Ceecc
Confidence 00000 0122556666666666665321 23577888999999999999998887 44332
Q ss_pred C----CceeEEec----CCCHHHH-HHhHhhccEEEcCC-----C---eEEecC-CCCCChhHHHHHHHHHHHhhC
Q 015435 350 K----QIGMFTFT----GLNSEQV-AFMTKEYHIYMTSD-----G---RISMAG-LSSKTVPHLTDAIHAAVTRMG 407 (407)
Q Consensus 350 ~----~~~~~~~~----~~~~~~~-~~~l~~~gi~~~~g-----g---Ris~~~-~~~e~i~~~~~~l~~~l~~~~ 407 (407)
+ ..+...++ +++.+.+ ..+++++||.+.+| | ||+..+ .+.+++..++.+|+++++.+|
T Consensus 299 ~~~~~~s~~v~~~~~p~~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 299 KKPEWRSDTVTAVVVPEGIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred CChhhcccceEEEeCCCCCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 2 12222222 4455544 56778899999876 2 887654 678999999999999998764
No 156
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.93 E-value=2e-23 Score=201.37 Aligned_cols=332 Identities=15% Similarity=0.102 Sum_probs=213.3
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhcccccccc---CCC---CCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKE---YLP---IVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---y~~---~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
.+++.|..+.. + +.|..+.++..+.+......... |.. ...++++|+.+++++ +.. ++++|++
T Consensus 31 ~~~iyLd~a~~----~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-~~~----~~~~v~~- 99 (424)
T PLN02855 31 SKLVYLDNAAT----S-QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFI-NAS----TSREIVF- 99 (424)
T ss_pred CCeEEeeCccc----c-CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHc-CCC----CCCEEEE-
Confidence 35677776653 4 55666776665555311111111 110 123568899999988 432 2378999
Q ss_pred ecCCcccHHHHHHHHHH--hhcCCCeEEecCCCCCCh----HHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCC
Q 015435 105 QCLSGTGSLRVGAEFLA--RHYHQLTIYIPQPTWGNH----PKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSG 178 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~--~~~~gd~Vi~~~p~y~~~----~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 178 (407)
|+|+|+++..++..+. .+.+||+|+++++.|+.. ....+..|++++.++.+ ..+.+|++++++.+. +++
T Consensus 100 -t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~--~~~~~~~~~l~~~i~--~~t 174 (424)
T PLN02855 100 -TRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLT--PDEVLDVEQLKELLS--EKT 174 (424)
T ss_pred -eCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHHhc--cCc
Confidence 9999999999854322 357899999999988753 34456789999999983 235689999999997 567
Q ss_pred cEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCcccccc
Q 015435 179 AIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLY 258 (407)
Q Consensus 179 ~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 258 (407)
+++++ ++++||||.+++ +++|+++|+++|+++++|+++.... .+. .+ ...+..+++.|++|.+|.+
T Consensus 175 ~lv~i-~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~~g~-~~~-----~~----~~~~~d~~~~s~~K~~gp~ 240 (424)
T PLN02855 175 KLVAT-HHVSNVLGSILP---VEDIVHWAHAVGAKVLVDACQSVPH-MPV-----DV----QTLGADFLVASSHKMCGPT 240 (424)
T ss_pred eEEEE-eCccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCC-cCC-----Cc----hhcCCCEEEeecccccCCC
Confidence 77776 899999999887 5677888999999999999974221 111 11 1122357799999987755
Q ss_pred CCCcceeEEeecChhhHHHHHHHHhh-----------------hhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHH
Q 015435 259 GERVGALSIVCKTEDVASRVESQLKL-----------------VIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAM 321 (407)
Q Consensus 259 G~r~G~~~~v~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 321 (407)
| +|++ +++ +++.+++...... ..+....+++..+..++..+++... ....++.
T Consensus 241 G--~G~l--~~~-~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~-----~~g~~~i 310 (424)
T PLN02855 241 G--IGFL--WGK-SDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLS-----EIGMDRI 310 (424)
T ss_pred c--cEEE--EEc-hhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHH-----HhCHHHH
Confidence 5 7998 455 3333322111000 0001111234444444444443111 1246677
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcccccC-------CceeEEec--CCCHHHHHHhHhhc-cEEEcCC------------
Q 015435 322 ADRIISMRQQLFDALSARGTPGDWSHIIK-------QIGMFTFT--GLNSEQVAFMTKEY-HIYMTSD------------ 379 (407)
Q Consensus 322 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-------~~~~~~~~--~~~~~~~~~~l~~~-gi~~~~g------------ 379 (407)
+++.++.++++++.|+++.. +.+..+ .++++.+. +.+.+.+...|.++ ||.+..|
T Consensus 311 ~~~~~~l~~~l~~~L~~~~g---~~i~~~~~~~~~~r~~~v~~~~~~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g 387 (424)
T PLN02855 311 HEYEVELGTYLYEKLSSVPG---VRIYGPKPSEGVGRAALCAFNVEGIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLG 387 (424)
T ss_pred HHHHHHHHHHHHHHHhcCCC---EEEeCCCcccccCcccEEEEEECCcCHHHHHHHhcccCCEEEechhhhhHHHHHHhC
Confidence 88888999999999987632 444322 23444433 55666666666555 9998753
Q ss_pred --C--eEEecC-CCCCChhHHHHHHHHHHHh
Q 015435 380 --G--RISMAG-LSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 380 --g--Ris~~~-~~~e~i~~~~~~l~~~l~~ 405 (407)
+ |||+.. .+++|++++++.|+++++.
T Consensus 388 ~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~ 418 (424)
T PLN02855 388 VNASARASLYFYNTKEEVDAFIHALKDTIAF 418 (424)
T ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence 1 999864 3779999999999998865
No 157
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.93 E-value=3.7e-23 Score=198.29 Aligned_cols=330 Identities=15% Similarity=0.094 Sum_probs=210.9
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhcccccc-c----cCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRV-K----EYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
+++.++|+...+ .|....+++++++.+++. ..... . .+....-..++++++++++ +. +..++
T Consensus 44 ~~~~~~~~sn~y---lgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~~~~~~~~~le~~la~~~-g~-------~~~~~- 110 (406)
T PRK13393 44 PREVTVWCSNDY---LGMGQHPAVLAAMHEALD-TCGAGAGGTRNISGTNHYHVLLEAELADLH-GK-------EAALL- 110 (406)
T ss_pred CccEEEeecccc---cCCCCCHHHHHHHHHHHH-HcCCCCcccccccCChHHHHHHHHHHHHHh-CC-------CcEEE-
Confidence 468999999988 565556678888877775 11111 0 0111223577888888887 42 45666
Q ss_pred ecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC-C-CCcEEE
Q 015435 105 QCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA-P-SGAIVL 182 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~-~-~~~~v~ 182 (407)
+++|++++..++..+....+||.|+.....|......+...|.+++.++. .|++.+++.+... + .+++++
T Consensus 111 -~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~ 182 (406)
T PRK13393 111 -FTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVA 182 (406)
T ss_pred -eCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEE
Confidence 66777888888654432336777777777777777788888888776654 3667777766532 2 344555
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCc
Q 015435 183 LHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERV 262 (407)
Q Consensus 183 i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 262 (407)
+ ++++||+|.+.+ +++|.++|+++|+++|+||+|....++.. .... ........+..++++||||.+|++|
T Consensus 183 ~-~~v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~-G~g~-~~~~~~~~~~~i~~~tlsKa~g~~G--- 253 (406)
T PRK13393 183 F-ESVYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPR-GGGI-AEREGLADRLTIIEGTLAKAFGVMG--- 253 (406)
T ss_pred E-cCCCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCC-CCch-hhhcCCCCCCeEEEEeCchhhcccC---
Confidence 5 899999999776 78888889999999999999873333211 1111 1111111224677899999999877
Q ss_pred ceeEEeecChhhHHHHHHHHhhhhhcc--cCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015435 263 GALSIVCKTEDVASRVESQLKLVIRPM--YSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARG 340 (407)
Q Consensus 263 G~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 340 (407)
||+ ++ ++++ .+.+......+ +.+.++..+.++.+.++... +. ...+++++++++++.+.|++.+
T Consensus 254 G~~--~~-~~~~----~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~------~~-~~~~~~~~~~~~~l~~~L~~~g 319 (406)
T PRK13393 254 GYI--TG-SAAL----CDFIRSFASGFIFTTSLPPAVAAGALASVRHLK------AS-SAERERHQDRVARLRARLDKAG 319 (406)
T ss_pred cee--eC-CHHH----HHHHHHhCcCceecCccCHHHHHHHHHHHHHHh------hC-HHHHHHHHHHHHHHHHHHHHcC
Confidence 888 34 4443 34343333321 23455556666666665321 11 2234667888999999998876
Q ss_pred CCCCcccccCCceeEEec-CC--CHHH-HHHhHhhccEEEcC--------C-C--eEEecC-CCCCChhHHHHHHHHHHH
Q 015435 341 TPGDWSHIIKQIGMFTFT-GL--NSEQ-VAFMTKEYHIYMTS--------D-G--RISMAG-LSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~-~~--~~~~-~~~~l~~~gi~~~~--------g-g--Ris~~~-~~~e~i~~~~~~l~~~l~ 404 (407)
+....+.+.++.+. +- .... ...+++++||.+.+ | + ||++.. .+++|+++++++|+++++
T Consensus 320 ----~~~~~~~~~i~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~ 395 (406)
T PRK13393 320 ----IPHLPNPSHIVPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWA 395 (406)
T ss_pred ----CCcCCCCCCeEEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 55555666655433 21 1223 34555557999864 2 2 887763 488999999999999987
Q ss_pred hhC
Q 015435 405 RMG 407 (407)
Q Consensus 405 ~~~ 407 (407)
+++
T Consensus 396 ~~~ 398 (406)
T PRK13393 396 RLG 398 (406)
T ss_pred hcC
Confidence 654
No 158
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.93 E-value=8.7e-24 Score=191.30 Aligned_cols=349 Identities=13% Similarity=0.105 Sum_probs=234.8
Q ss_pred hhhhHhhhhcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCC
Q 015435 19 LGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKD 98 (407)
Q Consensus 19 ~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~ 98 (407)
.....++-..+++++|||..|+-..+.| ..++.+++++.+++. .-.+..+........++.+.+++.. + ..
T Consensus 30 ~G~G~~v~D~~G~~YlDf~~Giav~~lG-H~hP~iv~al~~Q~~-kl~h~sn~~~~~~~~~la~~L~~~s-~------~~ 100 (404)
T COG4992 30 RGEGAYVWDQQGREYLDFAAGIAVNNLG-HCHPALVEALKEQAE-KLWHVSNLFYNEPQAELAEKLVELS-P------FA 100 (404)
T ss_pred eccccEEECCCCCEeeeeccceeeeccC-CCCHHHHHHHHHHHH-HhhhcccccCChHHHHHHHHHHhhC-c------cc
Confidence 3333444467889999999998888888 778899999988876 2222222223333445555555544 2 13
Q ss_pred CceEEeecCCcccHHHHHHHHHHhhcC---CCeEEecCCCCCChHHHHhhcCceeeEEEeecC--CCC----CcChhhHH
Q 015435 99 NRVTTVQCLSGTGSLRVGAEFLARHYH---QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDP--ATR----GLNFQGLL 169 (407)
Q Consensus 99 ~~i~~~~t~g~t~a~~~~~~~~~~~~~---gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~--~~~----~~d~~~l~ 169 (407)
+.+++ ++||++|++.++++.+.+.. ..+|+....+|++-....-..+.+..+..-+.| .++ --|+++++
T Consensus 101 d~vff--~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~ 178 (404)
T COG4992 101 DRVFF--CNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALE 178 (404)
T ss_pred cEEEE--cCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHH
Confidence 89999 99999999999999888764 347888888887655444444333322211110 000 12889999
Q ss_pred HHHHcCCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEE
Q 015435 170 EDLRAAPSGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVA 248 (407)
Q Consensus 170 ~~i~~~~~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 248 (407)
++++ +++.++++ -.-+-..|+. .+++.++++.++|++||+++|.||+..+++..| +.+....+.-. .+++
T Consensus 179 ~ai~--~~taAviv-EPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTG---k~fA~e~~gV~-PDI~-- 249 (404)
T COG4992 179 AAID--EDTAAVIV-EPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTG---KLFAYEHYGVE-PDIL-- 249 (404)
T ss_pred HHhc--cCeEEEEE-ecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccc---hHHHHHHhCCC-CCEE--
Confidence 9999 57888777 4445566776 677899999999999999999999999999876 45655544222 2233
Q ss_pred EecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHH
Q 015435 249 QSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISM 328 (407)
Q Consensus 249 ~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 328 (407)
++.|.+| .|+++|.. ++. +.+...+.......+++.+++++.++.+.++-.. -+...++.++.
T Consensus 250 -tlaK~Lg-GG~PigA~--la~-----~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~--------~e~ll~~v~~~ 312 (404)
T COG4992 250 -TLAKALG-GGFPIGAM--LAT-----EEIASAFTPGDHGSTFGGNPLACAVALAVLEVLL--------EEGLLENVREK 312 (404)
T ss_pred -Eeecccc-CCccceee--EEc-----hhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHc--------chhHHHHHHHH
Confidence 3789999 78999999 566 3334445555555677899999999888876331 23455667778
Q ss_pred HHHHHHHHHhcCCCCC-cccccCCceeEEecCC--C--HHHHHHhHhhccEEEcCCC----eEEecC-CCCCChhHHHHH
Q 015435 329 RQQLFDALSARGTPGD-WSHIIKQIGMFTFTGL--N--SEQVAFMTKEYHIYMTSDG----RISMAG-LSSKTVPHLTDA 398 (407)
Q Consensus 329 ~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~--~--~~~~~~~l~~~gi~~~~gg----Ris~~~-~~~e~i~~~~~~ 398 (407)
.+++.+.|+++..... +.-+...| ++.=+.+ + ...+.+.+.++|+.+.+.| |+...- +++++++.++++
T Consensus 313 g~~~~~~L~~l~~~~~~v~~vRG~G-LmiGiel~~~~~a~~~~~~~~~~gvL~~~a~~~ViR~~PpL~i~~eei~~~~~~ 391 (404)
T COG4992 313 GEYLLQRLRELKRRYPLVKEVRGRG-LMIGIELKEPYRARDIVRALREEGVLVLPAGPNVIRFLPPLVITEEEIDEALDA 391 (404)
T ss_pred HHHHHHHHHHHhhcCCceeeeecce-eEEEEEecCcccHHHHHHHHHHCCeEEecCCCCeEEecCCccCCHHHHHHHHHH
Confidence 8888888887643211 23233333 3322222 2 3444455566899998876 876543 688999999999
Q ss_pred HHHHHHh
Q 015435 399 IHAAVTR 405 (407)
Q Consensus 399 l~~~l~~ 405 (407)
++.++++
T Consensus 392 l~~~l~~ 398 (404)
T COG4992 392 LERALAA 398 (404)
T ss_pred HHHHHHH
Confidence 9999875
No 159
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.93 E-value=9.3e-24 Score=201.13 Aligned_cols=296 Identities=14% Similarity=0.091 Sum_probs=197.9
Q ss_pred CCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHh---hcC-CCeEEecCCCCCChHHH---HhhcC
Q 015435 75 VGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLAR---HYH-QLTIYIPQPTWGNHPKV---FTLAG 147 (407)
Q Consensus 75 ~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~---~~~-gd~Vi~~~p~y~~~~~~---~~~~G 147 (407)
.+.+.++++++++...... .++++|++ |+|+|+++.+++..+.. ..+ +++|+++.+.|+.+... ++..|
T Consensus 39 ~~~~~l~~a~~~~~~~~~~--~~~~~i~~--t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G 114 (382)
T TIGR03403 39 ATHPAIAEALDKLYKGINA--RDLDDIII--TSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLG 114 (382)
T ss_pred HHHHHHHHHHHHHHHHcCc--CCCCeEEE--eCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCC
Confidence 4567788888877733221 14589999 99999999988543211 144 46899998777666554 45689
Q ss_pred ceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCC
Q 015435 148 LSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGS 227 (407)
Q Consensus 148 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~ 227 (407)
.+++.+|.+ .++.+|++++++.+. ++++++++ ++|+||||++++ +++|.++|+++|+++++|+++..... .
T Consensus 115 ~~v~~v~~~--~~g~~d~~~l~~~i~--~~t~lv~~-~~~~n~tG~~~~---~~~I~~la~~~g~~~ivD~a~~~g~~-~ 185 (382)
T TIGR03403 115 VEVTYLPIN--EQGTITAEQVREAIT--EKTALVSV-MWANNETGMIFP---IKEIGEICKERGVLFHTDAVQAIGKI-P 185 (382)
T ss_pred CEEEEEecC--CCCCCCHHHHHHhcc--cCCeEEEE-EcccCCCccccC---HHHHHHHHHHcCCEEEEechhhcCCC-c
Confidence 999999983 346789999999987 56677666 899999999887 56788889999999999999652221 1
Q ss_pred CCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChh-hHHHHHHHHhhhhhcccCCCChhHHHHHHHHhc
Q 015435 228 LDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTED-VASRVESQLKLVIRPMYSSPPIHGASIVATILK 306 (407)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 306 (407)
. .+ .. ....+++.|++|.+|.+| +|++ +.++.. +...+.. ..........+++..++.++..+++
T Consensus 186 ~-----~~---~~-~~~D~~~~s~~K~~gp~G--~g~l--~vr~~~~~~p~~~g-~~~~~~~~~gt~~~~~~~al~~al~ 251 (382)
T TIGR03403 186 V-----DV---QK-AGVDFLSFSAHKFHGPKG--VGGL--YIRKGVELTPLFHG-GEHMGGRRSGTLNVPYIVAMGEAMR 251 (382)
T ss_pred c-----Cc---cc-cCCCEEEEcchhhCCCCc--eEEE--EECCCCCCCCcccC-CCCCCCcccCCcChHHHHHHHHHHH
Confidence 1 11 11 123488899999888777 4777 344221 1010100 0000111123566777766666664
Q ss_pred ChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCC------ceeEEecCCCHHHHHHhHhhccEEEcCC-
Q 015435 307 DSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQ------IGMFTFTGLNSEQVAFMTKEYHIYMTSD- 379 (407)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~gi~~~~g- 379 (407)
.. .+..+..++++++.++++.+.|.+++. +.+..+. ...|.+.+.+.+.+...|.++||.++.|
T Consensus 252 ~~------~~~~~~~~~~~~~l~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~g~ 322 (382)
T TIGR03403 252 LA------NEYLDFEKSHVRRLRDRLEDALLELPD---VFVVGDREHRVPNTILISIKGVEGEAMLWDLNKAGIAASTGS 322 (382)
T ss_pred HH------HHhHHHHHHHHHHHHHHHHHHHhcCCC---EEEECCCCCCcCCEEEEEeCCCCHHHHHHhhccCCEEEEchh
Confidence 22 134667778899999999999987642 4544332 2233444567776666677889999842
Q ss_pred ------------------------C--eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 380 ------------------------G--RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 380 ------------------------g--Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
+ |+|++. .+++|+++++++|+++++++
T Consensus 323 ~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~ 376 (382)
T TIGR03403 323 ACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRL 376 (382)
T ss_pred ccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2 999876 57799999999999988654
No 160
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.93 E-value=6.7e-24 Score=203.61 Aligned_cols=330 Identities=18% Similarity=0.202 Sum_probs=207.7
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhcc----ccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVND----QSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC 106 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t 106 (407)
++.++|..|. . +.++.+.++....+... ......|....+.+.+++..++.+....+. +..+|++ +
T Consensus 19 ~~~~~~~~~~-----~-~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~--~~~~v~~--~ 88 (402)
T cd00378 19 RETLELIASE-----N-FTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGA--EYANVQP--H 88 (402)
T ss_pred HhCeeeeccC-----C-cCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCC--Cceeeec--C
Confidence 5688887664 2 44555555554433201 011233545556666666443333111111 1233444 4
Q ss_pred CCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHH-----HhhcCceeeEEEeecC-CCCCcChhhHHHHHHcCCCCcE
Q 015435 107 LSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKV-----FTLAGLSVKTYRYYDP-ATRGLNFQGLLEDLRAAPSGAI 180 (407)
Q Consensus 107 ~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~-----~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~ 180 (407)
||++++.+++ ...+.+||+|++++|+|..+... ++..|.+++.+++..+ .++.+|++++++.+.. +++++
T Consensus 89 -sgt~a~~~~l--~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~-~~~~~ 164 (402)
T cd00378 89 -SGSQANLAVY--FALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALE-FKPKL 164 (402)
T ss_pred -CcHHHHHHHH--HHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHh-CCCCE
Confidence 5789998884 44478999999999999876543 5677887777776322 2588999999999863 34566
Q ss_pred EEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeecccc-ccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccC
Q 015435 181 VLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAY-QGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYG 259 (407)
Q Consensus 181 v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 259 (407)
+++ ++++||+ ..++++|+++|++||+++|+|++| .++.+.+.. ... + . .. .++++|+||.+ +|
T Consensus 165 v~~-~~~~~~~-----~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~--~~~---~-~-~~-dv~~~s~sK~l--~G 228 (402)
T cd00378 165 IVA-GASAYPR-----PIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVF--PNP---L-P-GA-DVVTTTTHKTL--RG 228 (402)
T ss_pred EEe-cCcccCC-----CcCHHHHHHHHHhcCCEEEEEccchhhhhhcccC--CCc---c-c-CC-cEEEeccccCC--CC
Confidence 665 7778765 236889999999999999999995 544443210 011 1 1 12 36899999976 78
Q ss_pred CCcceeEEeecChhhHHHHHHHHhhhhhcccCCCC-hhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015435 260 ERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPP-IHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSA 338 (407)
Q Consensus 260 ~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 338 (407)
+|.||+ +++++++.+++.. .......+.+ ...+.++..++.... ....++.+++++++++++.+.|++
T Consensus 229 ~~gg~i--~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~a~~~al~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~ 297 (402)
T cd00378 229 PRGGLI--LTRKGELAKKINS----AVFPGLQGGPHLHVIAAKAVALKEAL-----EPEFKAYAKQVVENAKALAEALKE 297 (402)
T ss_pred CCceEE--EeccHHHHHHHHH----HhCccccCCchHHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999 5775565555443 2222222222 222222222222110 113556778899999999999998
Q ss_pred cCCCCCcccc-cCCceeEEecCC-----CHHHHHHhHhhccEEEcCC-------------C-eEEecC-----CCCCChh
Q 015435 339 RGTPGDWSHI-IKQIGMFTFTGL-----NSEQVAFMTKEYHIYMTSD-------------G-RISMAG-----LSSKTVP 393 (407)
Q Consensus 339 ~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~l~~~gi~~~~g-------------g-Ris~~~-----~~~e~i~ 393 (407)
.| +.+. .+.++++.|+.+ +.+.+.++|+++||.+.+. + ||++.. ++++|++
T Consensus 298 ~g----~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~ 373 (402)
T cd00378 298 RG----FKVVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEME 373 (402)
T ss_pred CC----CeEeecCCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHH
Confidence 87 5544 456788888855 3456677788899999631 1 887643 3579999
Q ss_pred HHHHHHHHHHHh
Q 015435 394 HLTDAIHAAVTR 405 (407)
Q Consensus 394 ~~~~~l~~~l~~ 405 (407)
++++.|++++++
T Consensus 374 ~~~~~l~~~~~~ 385 (402)
T cd00378 374 EIADFIARALKD 385 (402)
T ss_pred HHHHHHHHHHhc
Confidence 999999998754
No 161
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.93 E-value=3e-23 Score=195.90 Aligned_cols=289 Identities=15% Similarity=0.112 Sum_probs=190.4
Q ss_pred cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCC--hHHHHhhcCceeeEEE
Q 015435 77 LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGN--HPKVFTLAGLSVKTYR 154 (407)
Q Consensus 77 ~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~--~~~~~~~~G~~~~~v~ 154 (407)
.+++++.+++++ +.. .++.+++ |+|+|+++.+++ ...+.+||+|+++.++|.+ +...++..|.+++.+|
T Consensus 34 ~~~~~~~la~~~-g~~----~~~~~~~--~~~~t~al~~~~--~~~~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 104 (356)
T cd06451 34 MDEILEGLRYVF-QTE----NGLTFLL--SGSGTGAMEAAL--SNLLEPGDKVLVGVNGVFGDRWADMAERYGADVDVVE 104 (356)
T ss_pred HHHHHHHHHHHh-cCC----CCCEEEE--ecCcHHHHHHHH--HHhCCCCCEEEEecCCchhHHHHHHHHHhCCCeEEee
Confidence 567788888887 431 1245778 999999998884 4446799999999987765 4567788999999999
Q ss_pred eecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHH
Q 015435 155 YYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQS 234 (407)
Q Consensus 155 ~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~ 234 (407)
.+ + ++.+|++++++.+.. .+++++++ ++++||||.+.+ +++|+++|+++|+++++|+++. ++... .+
T Consensus 105 ~~-~-~~~~~~~~l~~~i~~-~~~~~v~i-~~~~~~~G~~~~---~~~i~~~a~~~~~~li~D~~~~-~g~~~-----~~ 171 (356)
T cd06451 105 KP-W-GEAVSPEEIAEALEQ-HDIKAVTL-THNETSTGVLNP---LEGIGALAKKHDALLIVDAVSS-LGGEP-----FR 171 (356)
T ss_pred cC-C-CCCCCHHHHHHHHhc-cCCCEEEE-eccCCCcccccC---HHHHHHHHHhcCCEEEEeeehh-ccCcc-----cc
Confidence 83 3 467899999999972 15667777 789999999876 6677888999999999999864 22110 11
Q ss_pred HHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHH---HHhh---------hh--h-cccCCCChhHHH
Q 015435 235 VRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVES---QLKL---------VI--R-PMYSSPPIHGAS 299 (407)
Q Consensus 235 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~---~~~~---------~~--~-~~~~~~~~~~~~ 299 (407)
+ ... +..+++.|.+|.++.| .++||+ +.+ +++.+.+.. .... .. . ....+++...+.
T Consensus 172 ~---~~~-~~d~~~~s~~K~l~~p-~g~G~l--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~ 243 (356)
T cd06451 172 M---DEW-GVDVAYTGSQKALGAP-PGLGPI--AFS-ERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLY 243 (356)
T ss_pred c---ccc-CccEEEecCchhccCC-CCccee--EEC-HHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHH
Confidence 1 111 2235677889999854 468998 454 444443321 0000 00 0 111233444344
Q ss_pred HHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC---CceeEEec----CCCHHHHHHhHhhc
Q 015435 300 IVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIK---QIGMFTFT----GLNSEQVAFMTKEY 372 (407)
Q Consensus 300 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~l~~~ 372 (407)
++..+++... ....++..++.+++++++.+.|++.+ +....+ .++.+.|+ +.+.+.+.+.|.++
T Consensus 244 a~~aal~~l~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 314 (356)
T cd06451 244 ALREALDLIL-----EEGLENRWARHRRLAKALREGLEALG----LKLLAKPELRSPTVTAVLVPEGVDGDEVVRRLMKR 314 (356)
T ss_pred HHHHHHHHHH-----HhhHHHHHHHHHHHHHHHHHHHHHcC----CeeccCcccCCCceEEEECCCCCCHHHHHHHHHHh
Confidence 4444443211 12356677888899999999998877 443321 23344444 23455555555555
Q ss_pred -cEEEcCC------C--eEEecC-CCCCChhHHHHHHHHHHH
Q 015435 373 -HIYMTSD------G--RISMAG-LSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 373 -gi~~~~g------g--Ris~~~-~~~e~i~~~~~~l~~~l~ 404 (407)
||.+.+| + |++++. .+++++++++++|+++++
T Consensus 315 ~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 315 YNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred CCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 9999865 2 888864 478999999999998764
No 162
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.93 E-value=2.6e-23 Score=197.38 Aligned_cols=333 Identities=14% Similarity=0.137 Sum_probs=216.7
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC 106 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t 106 (407)
...++.+||+..|....+.| + .+++++++.+++. .. ..+ +..-..++++.+++.+.+.. ...+++ +
T Consensus 25 d~dg~~~lD~~s~~~~~~lG-~-~p~v~~a~~~~~~--~~--~~~-~~~~~~~~~~~la~~l~~~~-----~~~~~~--~ 90 (375)
T PRK04260 25 DTDGKKYLDFSSGIGVTNLG-F-HPQVQQALQKQAG--LI--WHS-PNLYLNSLQEEVAQKLIGDK-----DYLAFF--C 90 (375)
T ss_pred eCCCCEEEECCCCcccccCC-C-CHHHHHHHHHHHH--hc--Ccc-cCccCCHHHHHHHHHHhcCc-----CCEEEE--c
Confidence 34568899998885433455 4 5567777777765 21 112 22234578888998773321 123578 9
Q ss_pred CCcccHHHHHHHHHHhhcCCCeEEecCCCCCChH-HHHhhcCce---------eeEEEeecCCCCCcChhhHHHHHHcCC
Q 015435 107 LSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHP-KVFTLAGLS---------VKTYRYYDPATRGLNFQGLLEDLRAAP 176 (407)
Q Consensus 107 ~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~-~~~~~~G~~---------~~~v~~~~~~~~~~d~~~l~~~i~~~~ 176 (407)
+||+++++.++++......+++|++.+.+|++.. ..+...|.+ +..++.. + ..|++.+++.+. +
T Consensus 91 ~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~dl~~l~~~l~--~ 164 (375)
T PRK04260 91 NSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA-I---FNDLNSVKALVN--K 164 (375)
T ss_pred CccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe-C---CCCHHHHHHhcC--C
Confidence 9999999999877765566788999998887643 333222221 1112110 1 137888888775 3
Q ss_pred CCcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccc
Q 015435 177 SGAIVLLHACAHNPTGVDP-TLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNM 255 (407)
Q Consensus 177 ~~~~v~i~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 255 (407)
+..++++ .+++|++|+.. +.+.++++.++|+++|+++|+||+|.++...+ ..+..... ....+ +.||||.+
T Consensus 165 ~~a~vi~-e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g---~~~~~~~~-~~~pd---i~t~sK~l 236 (375)
T PRK04260 165 NTAAVML-ELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTG---KLYAFEHY-GIEPD---IFTLAKGL 236 (375)
T ss_pred CeEEEEE-CCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---chhhhHhh-CCCCC---EEEecccc
Confidence 4455555 88999999974 56789999999999999999999998876643 22222222 11222 34899999
Q ss_pred cccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHH
Q 015435 256 GLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDA 335 (407)
Q Consensus 256 ~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 335 (407)
+ +|+|+||+ +++ +.+.+.+.......+.+.+++.+.++.++++... ..+..++.++..+..++.+.+.
T Consensus 237 ~-~G~~ig~~--~~~-----~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~----~~~~~~~~~~~~~~~~~~l~~~ 304 (375)
T PRK04260 237 A-NGVPVGAM--LAK-----SSLGGAFGYGSHGSTFGGNKLSMAAASATLDIML----TAGFLEQALENGNYLQEQLQKA 304 (375)
T ss_pred c-CCcceEEE--EEc-----HHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHH----hhHHHHHHHHHHHHHHHHHHHH
Confidence 8 79999999 566 3344444433333455678888888888886442 1133455666666666666666
Q ss_pred HHhcCCCCCcccccCCceeEEecCC--CHHHHHHhHhhccEEEcCCC----eEEe-cCCCCCChhHHHHHHHHHH
Q 015435 336 LSARGTPGDWSHIIKQIGMFTFTGL--NSEQVAFMTKEYHIYMTSDG----RISM-AGLSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 336 l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~~~~gg----Ris~-~~~~~e~i~~~~~~l~~~l 403 (407)
+.+.+. +..+. ..|++.|+.+ +.+.+.+.+.++||.+.+.+ |+++ ..++++++++++++|++++
T Consensus 305 ~~~~~~---~~~~~-~~g~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~lR~~~~~~~t~~~i~~~l~~l~~~~ 375 (375)
T PRK04260 305 LQDKET---VTTVR-GLGYMIGIETTADLSQLVEAARDKGLIVLTAGTNVIRLLPPLTLTKEEIEQGIAILSEVF 375 (375)
T ss_pred HhhCCC---eeEEe-ccceEEEEEecCcHHHHHHHHHhCCCEEecCCCCEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence 654431 22222 2677888865 34555566666899998875 8887 4468899999999998753
No 163
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.93 E-value=1.4e-23 Score=200.22 Aligned_cols=334 Identities=13% Similarity=0.126 Sum_probs=212.6
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccc-cccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSR-VKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
...++++|||..|...++.| ..++++++++.+++. .... ...| +.....++.++++++. +. +.+++
T Consensus 31 d~dG~~ylD~~~g~~~~~lG-h~~p~v~~a~~~~~~-~~~~~~~~~-~~~~~~~la~~L~~~~-~~-------~~~~f-- 97 (397)
T TIGR03246 31 DQQGKEYIDFAGGIAVNALG-HAHPELVKALIEQAD-KLWHIGNGY-TNEPVLRLAKKLVDAT-FA-------DKVFF-- 97 (397)
T ss_pred eCCCCEEEECCcCHhhccCC-CCCHHHHHHHHHHHH-hcccccCcc-CCHHHHHHHHHHHhhC-CC-------CEEEE--
Confidence 34678999999986555677 567788888878775 1111 1112 2223455666666654 21 68999
Q ss_pred cCCcccHHHHHHHHHHhhc------CCCeEEecCCCCCChHHHH-hhcCc------------eeeEEEeecCCCCCcChh
Q 015435 106 CLSGTGSLRVGAEFLARHY------HQLTIYIPQPTWGNHPKVF-TLAGL------------SVKTYRYYDPATRGLNFQ 166 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~------~gd~Vi~~~p~y~~~~~~~-~~~G~------------~~~~v~~~~~~~~~~d~~ 166 (407)
++||++|++.++++.+... ..++|+..+-+|++..... ...|. .+..+|. .|++
T Consensus 98 ~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~ 170 (397)
T TIGR03246 98 CNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-------NDLA 170 (397)
T ss_pred eCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-------CCHH
Confidence 9999999999988876552 2357888888777764433 22221 1112221 2788
Q ss_pred hHHHHHHcCCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcE
Q 015435 167 GLLEDLRAAPSGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245 (407)
Q Consensus 167 ~l~~~i~~~~~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (407)
++++.+. ++.+++++ ...+++.|+. ++.+.+++|.++|++||+++|+||+|.+++..+ ..+....+.- ..+
T Consensus 171 ~l~~~l~--~~~aavi~-Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G---~~~a~~~~gv-~pD- 242 (397)
T TIGR03246 171 AAKALIS--DKTCAVIV-EPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTG---ELYAYMHYGV-TPD- 242 (397)
T ss_pred HHHHHhc--cCeEEEEE-ecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccc---cchhhhhcCC-CCC-
Confidence 9998886 45566665 4444445554 389999999999999999999999998887654 2222222211 112
Q ss_pred EEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHH
Q 015435 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRI 325 (407)
Q Consensus 246 i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 325 (407)
+.++||.++ +|+|+||+ +++ +++.+.+.......+++.+++++.++.+.++... .+++.+++
T Consensus 243 --i~t~~K~lg-gG~pigav--~~~-----~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~--------~~~l~~~~ 304 (397)
T TIGR03246 243 --ILTSAKALG-GGFPIGAM--LTT-----TEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVN--------TPELLAGV 304 (397)
T ss_pred --EEEeehhhh-CCcceeEE--EEc-----HHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHh--------hccHHHHH
Confidence 237899998 79999999 565 4455544433333344667788888877776321 13466778
Q ss_pred HHHHHHHHHHHHhcCCCCC-cccccCCceeEEec--C-C--CHHHHHHhHhhccEEEcCCC----eEEecC-CCCCChhH
Q 015435 326 ISMRQQLFDALSARGTPGD-WSHIIKQIGMFTFT--G-L--NSEQVAFMTKEYHIYMTSDG----RISMAG-LSSKTVPH 394 (407)
Q Consensus 326 ~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~--~-~--~~~~~~~~l~~~gi~~~~gg----Ris~~~-~~~e~i~~ 394 (407)
+++.+++.+.|++++.... +......|.++.+. . . ....+...|.++|+.+.+.| |++++. ++++++++
T Consensus 305 ~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~lR~~p~~~~t~~~i~~ 384 (397)
T TIGR03246 305 KQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALIAGPNVVRFAPSLVISDDDIDE 384 (397)
T ss_pred HHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCchhhHHHHHHHHHHHCCeEEeecCCCEEEEeCCCCCCHHHHHH
Confidence 8888888888887642111 22233344444321 1 1 12234444555899988754 774332 58899999
Q ss_pred HHHHHHHHHHhh
Q 015435 395 LTDAIHAAVTRM 406 (407)
Q Consensus 395 ~~~~l~~~l~~~ 406 (407)
++++|.++++++
T Consensus 385 ~~~~l~~~l~~~ 396 (397)
T TIGR03246 385 GLARFERAIEQV 396 (397)
T ss_pred HHHHHHHHHHHh
Confidence 999999998764
No 164
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.93 E-value=4.6e-23 Score=195.05 Aligned_cols=317 Identities=15% Similarity=0.107 Sum_probs=207.1
Q ss_pred cccchhHHHHHHHHhccccccccCCC--CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcC
Q 015435 48 PLVLNVVRKAEQLLVNDQSRVKEYLP--IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~y~~--~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~ 125 (407)
|.|..+.+++.+++. .+ ..++.+ ..-++++|+.+++++ +.... .++|++ |+|+|++++.++ ...+.+
T Consensus 9 pgp~~~~~~v~~~~~-~~--~~~~~~~~~~~~~~~r~~la~l~-~~~~~---~~~i~~--t~~~t~al~~~~--~~l~~~ 77 (363)
T TIGR02326 9 PGPLTTSRTVKEAML-FD--WCTWDSDYNIVVEQIRQQLLALA-TAEEG---YTSVLL--QGSGTFAVEAVI--GSAVPK 77 (363)
T ss_pred CCCCCCCHHHHHHhC-CC--CCCCChHHHHHHHHHHHHHHHHh-CCCCC---ceEEEE--cCCCHHHHHHHH--HhcCCC
Confidence 667777777777765 22 222322 123567788888887 43211 146889 999999999994 445678
Q ss_pred CCeEEecCCCCCCh--HHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHH
Q 015435 126 QLTIYIPQPTWGNH--PKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQI 203 (407)
Q Consensus 126 gd~Vi~~~p~y~~~--~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i 203 (407)
||.+++..+.+.+. ...++..|.+++.++. +.++.+|++++++.+.+.++.+++.+ ++++||||+..+ +++|
T Consensus 78 ~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~--~~~~~~d~~~l~~~l~~~~~~~~v~~-~~~~~~tG~~~~---i~~I 151 (363)
T TIGR02326 78 DGKLLVVINGAYGARIVQIAEYLGIPHHVVDT--GEVEPPDVVEVEAILAADPAITHIAL-VHCETTTGILNP---IEAV 151 (363)
T ss_pred CCeEEEEeCChhhHHHHHHHHHcCCceEEEeC--CCCCCCCHHHHHHHHhhCCCccEEEE-EeecCCccccCc---HHHH
Confidence 88887776655544 4667889999999998 44567999999999885444455555 778999999876 6889
Q ss_pred HHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccc-cccCCCcceeEEeecChhhHHHHHHHH
Q 015435 204 RQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNM-GLYGERVGALSIVCKTEDVASRVESQL 282 (407)
Q Consensus 204 ~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~v~~~~~~~~~~~~~~ 282 (407)
+++|++||+++|+|++++ ++..+ ..+.. .+..+++.|++|.+ +.+| +|++ +++ ++..+++....
T Consensus 152 ~~l~~~~g~~livD~~~~-~g~~~-----~~~~~----~~~D~~~~s~~K~l~~p~G--~G~l--~~~-~~~~~~~~~~~ 216 (363)
T TIGR02326 152 AKLAHRHGKVTIVDAMSS-FGGIP-----IDIAE----LHIDYLISSANKCIQGVPG--FGFV--IAR-QAELAACKGNA 216 (363)
T ss_pred HHHHHHcCCEEEEEcccc-ccCcc-----cchhh----cCccEEEecCccccccCCc--ceEE--EEC-HHHHHHhhcCC
Confidence 999999999999998654 33221 12211 23347789999987 4455 6898 465 33333221100
Q ss_pred h-----------hh---hhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc
Q 015435 283 K-----------LV---IRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHI 348 (407)
Q Consensus 283 ~-----------~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 348 (407)
. .. .....++++...+.++.++++... +. ...++.+++++++++++.+.|++.| +...
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~--~~--g~~~~~~~~~~~~~~~l~~~L~~~g----~~~~ 288 (363)
T TIGR02326 217 RSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELE--KE--GGVAARHQRYQQNQKTLVAGMRALG----FEPL 288 (363)
T ss_pred CceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHH--Hh--hCHHHHHHHHHHHHHHHHHHHHHcC----Ceec
Confidence 0 00 001122456666666655554221 00 1256677899999999999998887 3333
Q ss_pred cC---CceeEE---ecC---CCHHHHHHhHhhccEEEcCCC-------eEEe-cCCCCCChhHHHHHHHHHHH
Q 015435 349 IK---QIGMFT---FTG---LNSEQVAFMTKEYHIYMTSDG-------RISM-AGLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 349 ~~---~~~~~~---~~~---~~~~~~~~~l~~~gi~~~~gg-------Ris~-~~~~~e~i~~~~~~l~~~l~ 404 (407)
.+ ..+... +.. ++...+.+.|+++||.+.+|. ||++ +..+.+++++++++|++++.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 289 LDDEIQSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred cCcccCCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 22 233322 222 344556666677899998873 9985 55688999999999999875
No 165
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.92 E-value=3e-23 Score=198.92 Aligned_cols=342 Identities=12% Similarity=0.048 Sum_probs=204.6
Q ss_pred cCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 28 DTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 28 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
..+++++||..|....+.| ..++++++++.+++. ................+++.++++. +. +.+++ ++
T Consensus 28 ~dg~~~lD~~~~~~~~~~G-h~~p~v~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~-~~-------~~~~~--~~ 95 (400)
T PTZ00125 28 VEGKKYYDFLSAYSAVNQG-HCHPKILAALINQAQ-KLTLTSRAFYNDVLGLAEKYITDLF-GY-------DKVLP--MN 95 (400)
T ss_pred CCCCEEEEcccCHhhccCC-cCCHHHHHHHHHHHH-hcccccccccCHHHHHHHHHHHhCC-CC-------CEEEE--eC
Confidence 4568999999886544455 557777877777764 1111111111223344455554433 21 67888 99
Q ss_pred CcccHHHHHHHHHHhh--------cCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCC------CCcChhhHHHHHH
Q 015435 108 SGTGSLRVGAEFLARH--------YHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPAT------RGLNFQGLLEDLR 173 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~--------~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~------~~~d~~~l~~~i~ 173 (407)
||++|++.++++.... ..+++|+..+-+|.+........+......+...+.. ...|++++++.+.
T Consensus 96 SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~ 175 (400)
T PTZ00125 96 SGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQ 175 (400)
T ss_pred CcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhC
Confidence 9999999997766432 1346788888888776544332211110000000000 1138899999885
Q ss_pred cCCCCcEEEEecCCCCCCCCCCC-HHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecC
Q 015435 174 AAPSGAIVLLHACAHNPTGVDPT-LEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYA 252 (407)
Q Consensus 174 ~~~~~~~v~i~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 252 (407)
.++.+++++ .+++||||.+++ .+.+++|.++|++||+++|+||+|.++++.+ ........ ....+++ ++|
T Consensus 176 -~~~~~~v~~-ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G---~~~~~~~~-~~~pd~~---~~s 246 (400)
T PTZ00125 176 -DPNVAAFIV-EPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTG---KLLAHDHE-GVKPDIV---LLG 246 (400)
T ss_pred -CCCeEEEEE-cCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---hhhHHHhc-CCCCCEE---EEc
Confidence 234566666 678999999886 5569999999999999999999998887654 12222111 1112222 478
Q ss_pred ccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHH
Q 015435 253 KNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQL 332 (407)
Q Consensus 253 K~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 332 (407)
|.++.+++|+||+ +++ +++.+.+.......+.+.+++.+.++.+.++... + +...++.+++.+++
T Consensus 247 K~l~~g~~~ig~v--~~~-----~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~------~--~~~~~~~~~~~~~l 311 (400)
T PTZ00125 247 KALSGGLYPISAV--LAN-----DDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLK------E--EKLAENAQRLGEVF 311 (400)
T ss_pred ccccCCCcCcEEE--EEc-----HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHH------h--cCHHHHHHHHHHHH
Confidence 9998544699999 565 4444444433333344667777887776664321 1 12334555566666
Q ss_pred HHHHHhc-CCCCCcccccCCceeEEecCC------CHHHHHHhHhhccEEEcCCC----eEEecC-CCCCChhHHHHHHH
Q 015435 333 FDALSAR-GTPGDWSHIIKQIGMFTFTGL------NSEQVAFMTKEYHIYMTSDG----RISMAG-LSSKTVPHLTDAIH 400 (407)
Q Consensus 333 ~~~l~~~-~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~gi~~~~gg----Ris~~~-~~~e~i~~~~~~l~ 400 (407)
.+.|+++ +.........+.| .+.++.+ +...+...|.++||.+.|++ ||+... .+++++++++++|.
T Consensus 312 ~~~l~~l~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~l~~l~ 390 (400)
T PTZ00125 312 RDGLKELLKKSPWVKEIRGKG-LLNAIVFDHSDGVNAWDLCLKLKENGLLAKPTHDNIIRFAPPLVITKEQLDQALEIIK 390 (400)
T ss_pred HHHHHHHHhcCCCeEEEeccc-EEEEEEEccCcchHHHHHHHHHHHCCeEEeecCCCEEEEECCccCCHHHHHHHHHHHH
Confidence 6666554 2111122234434 4444423 22233344446899999865 888542 58899999999999
Q ss_pred HHHHhh
Q 015435 401 AAVTRM 406 (407)
Q Consensus 401 ~~l~~~ 406 (407)
++++++
T Consensus 391 ~~l~~~ 396 (400)
T PTZ00125 391 KVLKSF 396 (400)
T ss_pred HHHHHH
Confidence 998765
No 166
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.92 E-value=5.1e-23 Score=197.25 Aligned_cols=328 Identities=19% Similarity=0.142 Sum_probs=203.8
Q ss_pred eeeeeeeeeecCCCccccchhHHHHHHHHhcccc-ccccCCCCCC----cHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 33 KLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQS-RVKEYLPIVG----LVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 33 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~g----~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
.+.|..+.+ + +.|..+.+++.+.+..... ....|....+ .+++|+.+++++ +.. +++|++ ++
T Consensus 18 ~~yl~~~~~----~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~-~~~-----~~~v~~--~~ 84 (397)
T TIGR01976 18 RVFFDNPAG----T-QIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLL-NAD-----PPEVVF--GA 84 (397)
T ss_pred eEEecCCcc----C-CCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHc-CCC-----CCeEEE--eC
Confidence 455554432 2 4466666666666641111 1123433323 568888899887 431 357988 99
Q ss_pred CcccHHHHHHHHHH-hhcCCCeEEecCCCCCChH----HHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEE
Q 015435 108 SGTGSLRVGAEFLA-RHYHQLTIYIPQPTWGNHP----KVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVL 182 (407)
Q Consensus 108 g~t~a~~~~~~~~~-~~~~gd~Vi~~~p~y~~~~----~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~ 182 (407)
|+++++..+...+. .+.+||+|+++++.|.+.. ..++..|++++.++.+ ++++.+|++++++.+. +++++++
T Consensus 85 ~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~~i~--~~~~lv~ 161 (397)
T TIGR01976 85 NATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVD-EATGELHPDDLASLLS--PRTRLVA 161 (397)
T ss_pred CHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecc-ccCCCcCHHHHHHhcC--CCceEEE
Confidence 99999887643332 3578999999999887654 3456789999999984 3346789999999987 5667777
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCc
Q 015435 183 LHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERV 262 (407)
Q Consensus 183 i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 262 (407)
+ ++|+||||.+.+ +++|+++|++||+++++|+++... .. ...+ .. .+..+++.|++|.+| .|+
T Consensus 162 i-~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~-~~-----~~~~---~~-~~~d~~~~s~~K~~g---~~~ 224 (397)
T TIGR01976 162 V-TAASNTLGSIVD---LAAITELVHAAGALVVVDAVHYAP-HG-----LIDV---QA-TGADFLTCSAYKFFG---PHM 224 (397)
T ss_pred E-eCCCCCCCccCC---HHHHHHHHHHcCCEEEEehhhhcc-cc-----CCCH---HH-cCCCEEEEechhhcC---Cce
Confidence 6 899999999764 888888899999999999987421 11 0111 12 233466689999874 568
Q ss_pred ceeEEeecChhhHHHHHHHHhhh------hhcccCCCChhHHH---HHHHHhcChh------hHHhHHHHHHHHHHHHHH
Q 015435 263 GALSIVCKTEDVASRVESQLKLV------IRPMYSSPPIHGAS---IVATILKDST------MYKEWTLELKAMADRIIS 327 (407)
Q Consensus 263 G~~~~v~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~---~~~~~l~~~~------~~~~~~~~~~~~~~~~~~ 327 (407)
|++ +++ ++..+.+....... .+....+++..... ++...+.... .+.+.....++.+++..+
T Consensus 225 G~l--~~~-~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 301 (397)
T TIGR01976 225 GIL--WGR-PELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENR 301 (397)
T ss_pred EEE--EEc-HHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHH
Confidence 998 455 33333222111000 00111123333333 3333332211 111111235677888888
Q ss_pred HHHHHHHHHHhcCCCCCcccccC-----CceeEEec--CCCHHHHHHhHhhccEEEcCC-----------------C--e
Q 015435 328 MRQQLFDALSARGTPGDWSHIIK-----QIGMFTFT--GLNSEQVAFMTKEYHIYMTSD-----------------G--R 381 (407)
Q Consensus 328 ~~~~l~~~l~~~~~~~~~~~~~~-----~~~~~~~~--~~~~~~~~~~l~~~gi~~~~g-----------------g--R 381 (407)
.++++.+.|++++. +.+..+ .++++.+. +.+.+.+.+.|+++||.+..+ + |
T Consensus 302 l~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iR 378 (397)
T TIGR01976 302 LAEYLLVGLSDLPG---VTLYGVARLAARVPTVSFTVHGLPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVR 378 (397)
T ss_pred HHHHHHHHHhcCCC---EEEeCCCCccCCCceEEEEeCCcCHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEE
Confidence 99999999988753 444332 45544432 345566666677789998753 2 8
Q ss_pred EEecC-CCCCChhHHHHHH
Q 015435 382 ISMAG-LSSKTVPHLTDAI 399 (407)
Q Consensus 382 is~~~-~~~e~i~~~~~~l 399 (407)
||+.. .+++|++++++.|
T Consensus 379 is~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 379 VGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred EEeeccCCHHHHHHHHHhC
Confidence 88854 4778899888764
No 167
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.92 E-value=2e-23 Score=200.11 Aligned_cols=322 Identities=15% Similarity=0.117 Sum_probs=200.0
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCC-----CCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLP-----IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~-----~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
..++++++|.+ + ..+++.+.++..+.. ....|.+ ..|..++++++++++....+. +.+++.+
T Consensus 20 ~~~~~l~~g~~----~-~~~p~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~~~v~~-- 86 (398)
T cd00613 20 QSMSFLGSGTY----K-HNPPAVIKRNILENE----FYTAYTPYQPEISQGRLQALFELQTMLCELTGM--DVANASL-- 86 (398)
T ss_pred cCccccccccc----C-CcCcHHHHHHhcccc----CcccCCCCChhhhhhHHHHHHHHHHHHHHHHCC--Cccceec--
Confidence 45699999986 3 334455555444431 1234555 678899999999888544332 2347777
Q ss_pred cCCcccHHHHHHHHHHhhcC--CCeEEecCCCCCChHHHHhhcC----ceeeEEEeecCCCCCcChhhHHHHHHcCCCCc
Q 015435 106 CLSGTGSLRVGAEFLARHYH--QLTIYIPQPTWGNHPKVFTLAG----LSVKTYRYYDPATRGLNFQGLLEDLRAAPSGA 179 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~~--gd~Vi~~~p~y~~~~~~~~~~G----~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 179 (407)
+++++.+.+.++ ....+.+ ||+|++++|.|+.+...+...| .+++.++.. ..+.+|++++++.+. ++++
T Consensus 87 ~~~g~~~~~~~~-~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~--~~t~ 161 (398)
T cd00613 87 QDEATAAAEAAG-LAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSD--EGGTVDLEALKEEVS--EEVA 161 (398)
T ss_pred cCchHHHHHHHH-HHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccC--CCCCcCHHHHHHhcC--CCeE
Confidence 775554444432 2223444 9999999999999999888777 899999883 345789999999887 5677
Q ss_pred EEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCcccccc-
Q 015435 180 IVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLY- 258 (407)
Q Consensus 180 ~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~- 258 (407)
++++ ++|+ |||.+. +.+++|+++|++||+++|+|+++...... .+ ....+..++++|++|.+ +|
T Consensus 162 ~viv-~~~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~~-~~---------~~~~~~d~~~~s~~K~~-~p~ 226 (398)
T cd00613 162 ALMV-QYPN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTGL-KP---------PGEYGADIVVGNLQKTG-VPH 226 (398)
T ss_pred EEEE-ECCC-CCceec--chHHHHHHHHHhcCCEEEEEeccccccCC-CC---------hHHcCCCEEEeeccccC-CCC
Confidence 7777 6675 899983 45799999999999999999986533321 10 01124578999999998 55
Q ss_pred ---CCCcceeEEeecChhhHHHHHHHH-----------------h---------hhhhcccCCCChhHHHHHHHHhcChh
Q 015435 259 ---GERVGALSIVCKTEDVASRVESQL-----------------K---------LVIRPMYSSPPIHGASIVATILKDST 309 (407)
Q Consensus 259 ---G~r~G~~~~v~~~~~~~~~~~~~~-----------------~---------~~~~~~~~~~~~~~~~~~~~~l~~~~ 309 (407)
|+++|++ +.+ +++.+.+.... . ... ....+.+.....++...+....
T Consensus 227 g~Ggp~~g~l--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~-~~~~~~~~~~~~~a~~~l~~~~ 302 (398)
T cd00613 227 GGGGPGAGFF--AVK-KELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKAT-SNICTGQALLALMAAMYIVYLG 302 (398)
T ss_pred CCCCCceeEE--EEh-hhhHhhCCCCeeccccccCCCcceEEecccchhhccccccc-ccceecHHHHHHHHHHHHHHhC
Confidence 7899999 454 33333210000 0 000 0001112222222222222111
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeE--EecCC------CHHHHHHhHhhccEEEcC---
Q 015435 310 MYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMF--TFTGL------NSEQVAFMTKEYHIYMTS--- 378 (407)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~l~~~gi~~~~--- 378 (407)
....++.+++++++++++.+.|++++. .. .+.+..+ +++.+ +.+.+...|.++||.+..
T Consensus 303 -----~~g~~~~~~~~~~~~~~l~~~L~~~~~---~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~~~~ 372 (398)
T cd00613 303 -----PEGLKEIAERAHLNANYLAKRLKEVGG---VL--PFNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPTMYL 372 (398)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHhcCC---cc--cCCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCcccccccc
Confidence 134667889999999999999998763 22 1212222 12222 233444445567887754
Q ss_pred -C-C--eEEecC-CCCCChhHHHHHH
Q 015435 379 -D-G--RISMAG-LSSKTVPHLTDAI 399 (407)
Q Consensus 379 -g-g--Ris~~~-~~~e~i~~~~~~l 399 (407)
+ + |+++.. .+++|++++++.|
T Consensus 373 ~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 373 PVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred CCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 2 2 888754 4789999988764
No 168
>PLN00144 acetylornithine transaminase
Probab=99.92 E-value=3.8e-23 Score=195.55 Aligned_cols=332 Identities=14% Similarity=0.128 Sum_probs=209.0
Q ss_pred cCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 28 DTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 28 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
..++.+||+..|....+.| ..++++++++.+++. .......+.......++.+.+++.. . .+.+++ ++
T Consensus 12 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~-~~~~~~~~~~~~~~~~la~~l~~~~-~-------~~~v~f--~~ 79 (382)
T PLN00144 12 VEGKEYLDMAAGIAVNALG-HGDPDWVKAVAEQAG-TLAHVSNVYHTIPQVELAKRLVASS-F-------ADRVFF--CN 79 (382)
T ss_pred CCCCEEEECCcCHHhccCC-CCCHHHHHHHHHHHH-hcCCccccccCHHHHHHHHHHHhcC-C-------CCeEEE--eC
Confidence 4578999999886555567 667788888888886 1111111111222334444444432 1 268999 99
Q ss_pred CcccHHHHHHHHHHhhcC-------------CCeEEecCCCCCChHHHHhhcCce-------------eeEEEeecCCCC
Q 015435 108 SGTGSLRVGAEFLARHYH-------------QLTIYIPQPTWGNHPKVFTLAGLS-------------VKTYRYYDPATR 161 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~~-------------gd~Vi~~~p~y~~~~~~~~~~G~~-------------~~~v~~~~~~~~ 161 (407)
+|++|++.++++.+.... ..+|+....+|++........... +..+|.
T Consensus 80 sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~------ 153 (382)
T PLN00144 80 SGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEY------ 153 (382)
T ss_pred CcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCC------
Confidence 999999999888765531 246888888888776544432211 111111
Q ss_pred CcChhhHHHHHHcCCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHH
Q 015435 162 GLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVA 240 (407)
Q Consensus 162 ~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~ 240 (407)
.|++.+++.+.. .+..++++.+. +||+|+. .+.+.+++|.++|++||+++|+||+|.+|...+ ..++...+.-
T Consensus 154 -~d~~~l~~~~~~-~~~aavi~eP~-q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g---~~~~~~~~~~ 227 (382)
T PLN00144 154 -GNLEAARKLIQK-GKTAAVFVEPV-QGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTG---YLWAHEAYGV 227 (382)
T ss_pred -CCHHHHHHhcCC-CCeEEEEEccc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hHhhhhhcCC
Confidence 268888888752 34566666555 8885553 345569999999999999999999999998764 2222212211
Q ss_pred cCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhc---ChhhHHhHHHH
Q 015435 241 DGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILK---DSTMYKEWTLE 317 (407)
Q Consensus 241 ~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~ 317 (407)
..| +.+|||.++ +|+|+||+ +++ +++.+.+.......+++.+++.+.++.+.++ +.+ +.+.
T Consensus 228 ~PD----i~t~sK~l~-~G~pig~v--~~~-----~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~----~~~~ 291 (382)
T PLN00144 228 EPD----IMTLAKPLA-GGLPIGAV--LVT-----EKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPG----FLAS 291 (382)
T ss_pred CCC----EEEeccccc-CCcceEEE--EEc-----HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhch----HHHH
Confidence 122 677999998 89999999 566 4455544433344555778888888885443 332 1122
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCC--HHHHHHhHhhccEEEcCCC-----eEEecC-CCC
Q 015435 318 LKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLN--SEQVAFMTKEYHIYMTSDG-----RISMAG-LSS 389 (407)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gi~~~~gg-----Ris~~~-~~~ 389 (407)
+.++.+++ ++.+.+.+.+.+. +..+. ..|++.|+.++ .+.+...+.++||.+.+++ |++++. +++
T Consensus 292 ~~~~g~~l---~~~l~~~~~~~~~---~~~vr-g~G~~~~l~l~~~~~~~~~~~~~~Gv~i~~~~~~~~lrl~p~~~~~~ 364 (382)
T PLN00144 292 VAKKGEYL---RELLRRKLGGNPH---VKEVR-GVGLLVGIQLDVPAGPLVDACRDSGLLVLTAGKGDVVRLVPPLVISE 364 (382)
T ss_pred HHHHHHHH---HHHHHHHHhhCCC---ceeee-cCceEEEEEecCccHHHHHHHHHCCeEEeecCCCCEEEEeCCCccCH
Confidence 23222222 2333333333321 21122 27788888663 3344455566999998864 888876 688
Q ss_pred CChhHHHHHHHHHHHhh
Q 015435 390 KTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 390 e~i~~~~~~l~~~l~~~ 406 (407)
++++.++++|.++++++
T Consensus 365 ~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 365 AELEQAVEILADCLPAL 381 (382)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999998764
No 169
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.92 E-value=6.4e-23 Score=193.69 Aligned_cols=315 Identities=17% Similarity=0.172 Sum_probs=203.2
Q ss_pred cccchhHHHHHHHHhccccccccCCC--CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcC
Q 015435 48 PLVLNVVRKAEQLLVNDQSRVKEYLP--IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~y~~--~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~ 125 (407)
|.|....+++.+++.. . ...+.+ ..-..++|+.+++++ +.... ...|++ ++|||+++..++ ...+.+
T Consensus 5 p~p~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~la~~~-~~~~~---~~~i~~--~~~gt~~l~~~~--~~~~~~ 73 (355)
T TIGR03301 5 PGPLSTSATVRDAMLV--D-WCHWDSEFNDVTDQVRDRLLALA-GGDDN---HTCVLL--QGSGTFAVEATI--GSLVPR 73 (355)
T ss_pred CCCCCCCHHHHHHhhh--h-ccCCCHHHHHHHHHHHHHHHHHh-cCCCC---CcEEEE--eCCcHHHHHHHH--HhccCC
Confidence 5566666666666541 1 111211 134677888888888 43211 135778 999999999994 444667
Q ss_pred CCeEEecCCC-CCC-hHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHH
Q 015435 126 QLTIYIPQPT-WGN-HPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQI 203 (407)
Q Consensus 126 gd~Vi~~~p~-y~~-~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i 203 (407)
+|+|++..+. |.. +...++..|.+++.++. +.++.+|++++++.+.+.++...+++ ++++||||+..+ +++|
T Consensus 74 ~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~--~~~~~~d~~~l~~~l~~~~~~~~v~~-~~~~~~~G~~~~---~~~i 147 (355)
T TIGR03301 74 DGKLLVLINGAYGERLAKICEYLGIPHTDLNF--SEYEPPDLNRIEEALAADPDITHVAT-VHHETTTGILNP---LEAI 147 (355)
T ss_pred CCeEEEECCCchhhHHHHHHHHcCCceEEEec--CCCCCCCHHHHHHHHHhCCCceEEEE-EecCCcccchhH---HHHH
Confidence 8887766654 443 45677789999999987 34568999999999975444455555 788999999654 7899
Q ss_pred HHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccc-cccCCCcceeEEeecChhhHHHHHHHH
Q 015435 204 RQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNM-GLYGERVGALSIVCKTEDVASRVESQL 282 (407)
Q Consensus 204 ~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~v~~~~~~~~~~~~~~ 282 (407)
+++|++||+++|+|++++ +...+ ..+ ...+..++++|++|.+ +++| +||+ +++ +++.+.+....
T Consensus 148 ~~l~~~~~~~livD~~~s-~g~~~-----~~~----~~~~~d~~~~s~~K~l~~~~G--~g~~--~~~-~~~~~~~~~~~ 212 (355)
T TIGR03301 148 AKVARSHGAVLIVDAMSS-FGAIP-----IDI----EELDVDALIASANKCLEGVPG--FGFV--IAR-RDLLEASAGNA 212 (355)
T ss_pred HHHHHHcCCEEEEEeccc-cCCcc-----cch----hhcCccEEEecCCcccccCCc--eeEE--EEC-HHHHHHhhCCC
Confidence 999999999999998654 33211 111 1124557889999986 4455 6888 455 44444332100
Q ss_pred hh-----------h--hhcccCCCChhHHHHHHHHhcChhhHHhHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc
Q 015435 283 KL-----------V--IRPMYSSPPIHGASIVATILKDSTMYKEWTL-ELKAMADRIISMRQQLFDALSARGTPGDWSHI 348 (407)
Q Consensus 283 ~~-----------~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 348 (407)
.. . ......+++...+.++..+++... .. ..++.+++++++++++.+.|++.| +...
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~-----~~g~~~~~~~~~~~~~~~~~~~L~~~g----~~~~ 283 (355)
T TIGR03301 213 RSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELE-----AEGGVPARIARYRRNRELLVDGLRALG----FQPL 283 (355)
T ss_pred CCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHH-----HcccHHHHHHHHHHHHHHHHHHHHHcC----Ceee
Confidence 00 0 011223556666666555554221 12 256677888999999999998887 4433
Q ss_pred cC---CceeEEecCC------CHHHHHHhHhhccEEEcCCC-------eEEec-CCCCCChhHHHHHHHHHH
Q 015435 349 IK---QIGMFTFTGL------NSEQVAFMTKEYHIYMTSDG-------RISMA-GLSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 349 ~~---~~~~~~~~~~------~~~~~~~~l~~~gi~~~~gg-------Ris~~-~~~~e~i~~~~~~l~~~l 403 (407)
.+ .+++++|+.+ +.+.+.+.|.++||.+.+++ ||++. ..++++++++++.|++++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 284 LPERWQSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred cCCCCCCCcEEEEECCCCCcchHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 22 3444454432 33456666777899998863 89864 457899999999998753
No 170
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.92 E-value=3.2e-22 Score=190.08 Aligned_cols=296 Identities=13% Similarity=0.172 Sum_probs=195.1
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhh--cCCCeEEecCCCCCChHHHHhhcCceeeEEEe
Q 015435 78 VDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARH--YHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRY 155 (407)
Q Consensus 78 ~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~--~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~ 155 (407)
.++++.+++++ +. ++.++++ ++|+++++..++..+... .++|+|+++++.|..+...++..|.+++.+|.
T Consensus 62 ~~~~~~la~~~-g~-----~~~~~~~--~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~ 133 (371)
T PRK13520 62 EEAVEMLGELL-HL-----PDAYGYI--TSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAADMLGVELRRAPL 133 (371)
T ss_pred HHHHHHHHHHh-CC-----CCCCeEE--ecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHHHcCceEEEecC
Confidence 56777777776 43 2357888 999999998885444322 25789999999999998888999999999987
Q ss_pred ecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHH
Q 015435 156 YDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSV 235 (407)
Q Consensus 156 ~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~ 235 (407)
++++.+|++++++.+. ++++.+++ +.++||||.+.+ +++|.++|+++|+++++|++|..+...-. .....+
T Consensus 134 --~~~~~~d~~~l~~~i~--~~~~~vi~-~~~~~~tG~~~~---l~~I~~l~~~~g~~livD~a~~~~~~~~~-~~~~~~ 204 (371)
T PRK13520 134 --DDDYRVDVKAVEDLID--DNTIGIVG-IAGTTELGQVDP---IPELSKIALENGIFLHVDAAFGGFVIPFL-DDPPNF 204 (371)
T ss_pred --CCCCcCCHHHHHHHHh--hCCEEEEE-EcCCcCCcccCC---HHHHHHHHHHcCCCEEEEecchhHHHHhh-cCCCCc
Confidence 3456789999999997 45666665 567899999765 78888889999999999999876542100 000000
Q ss_pred HHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhh----h-cccCCCChhHHHHHHHHhcChhh
Q 015435 236 RMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVI----R-PMYSSPPIHGASIVATILKDSTM 310 (407)
Q Consensus 236 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~l~~~~~ 310 (407)
. + ....-..+..|.+| |+++|.++|++ +..++++.+.+.. ...+. + ....+.+...+.++..+++...
T Consensus 205 ~-~-~~~~vd~~~~s~~K-~~~a~~~~G~~--~~~~~~~~~~l~~-~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~- 277 (371)
T PRK13520 205 D-F-SLPGVDSITIDPHK-MGLAPIPAGGI--LFRDESYLDALAV-DTPYLTSKKQATLTGTRSGAGVAATYAVMKYLG- 277 (371)
T ss_pred c-c-cCCCCceEEECCcc-ccCccCCceEE--EEcCHHHHHhhcc-cCccccCCCCcceEeeccChHHHHHHHHHhhhc-
Confidence 0 0 01122344456677 56677899988 5665554443321 00010 0 0001122333444444444211
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-cccCCceeEEecCCCHHHHHHhHhhccEEEcCCC-----eEEe
Q 015435 311 YKEWTLELKAMADRIISMRQQLFDALSARGTPGDWS-HIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDG-----RISM 384 (407)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~gg-----Ris~ 384 (407)
....++.+++..++++++.+.|++.| +. +..+..+++.+.--+.+.+...|.++||.+.+++ ||++
T Consensus 278 ----~~g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~v~~~~~~~~~v~~~L~~~gi~v~~~~~~~~iRis~ 349 (371)
T PRK13520 278 ----REGYRKVVERCMENTRWLAEELKERG----FEPVIEPVLNIVAFDDPNPDEVREKLRERGWRVSVTRCPEALRIVC 349 (371)
T ss_pred ----HhHHHHHHHHHHHHHHHHHHHHHhCC----CEEecCCCceEEEEecCCHHHHHHHHHHCCceeccCCCCCEEEEEE
Confidence 13356778888999999999998876 55 4455555544322255566666666799987753 8987
Q ss_pred cC-CCCCChhHHHHHHHHHHHh
Q 015435 385 AG-LSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 385 ~~-~~~e~i~~~~~~l~~~l~~ 405 (407)
.. .+++|++++++.|++++++
T Consensus 350 ~~~~t~edi~~~~~~l~~~~~~ 371 (371)
T PRK13520 350 MPHVTREHIENFLEDLKEVKKR 371 (371)
T ss_pred ECCCCHHHHHHHHHHHHHHhhC
Confidence 54 4789999999999998764
No 171
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.92 E-value=3.2e-22 Score=188.47 Aligned_cols=274 Identities=15% Similarity=0.173 Sum_probs=190.6
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHH----HHhhcCc
Q 015435 73 PIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPK----VFTLAGL 148 (407)
Q Consensus 73 ~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~----~~~~~G~ 148 (407)
+......|++.++++. +. +..++ ++||++++.++ +..+.+||+|++++|.|+.... .+...|+
T Consensus 50 ~~pt~~~le~~la~l~-g~-------~~~~~--~~sG~~ai~~~---~~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~ 116 (366)
T PRK08247 50 GNPTRGVLEQAIADLE-GG-------DQGFA--CSSGMAAIQLV---MSLFRSGDELIVSSDLYGGTYRLFEEHWKKWNV 116 (366)
T ss_pred CCchHHHHHHHHHHHh-CC-------CcEEE--EcCHHHHHHHH---HHHhCCCCEEEEecCCcCcHHHHHHHHhhccCc
Confidence 4456889999999988 43 34567 88999999876 3456799999999999997544 4456899
Q ss_pred eeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCC
Q 015435 149 SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSL 228 (407)
Q Consensus 149 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~ 228 (407)
+++.++. .|++++++++. ++++++++ ++|+||||. ..++++|+++|+++|+++|+|++|.......
T Consensus 117 ~v~~vd~-------~d~~~l~~~i~--~~tklv~l-e~P~NP~~~---~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~- 182 (366)
T PRK08247 117 RFVYVNT-------ASLKAIEQAIT--PNTKAIFI-ETPTNPLMQ---ETDIAAIAKIAKKHGLLLIVDNTFYTPVLQR- 182 (366)
T ss_pred eEEEECC-------CCHHHHHHhcc--cCceEEEE-ECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCccccccC-
Confidence 9988864 38899999887 56777777 899999876 7899999999999999999999985333210
Q ss_pred CchhHHHHHHHHcCCcEEEEEecCcccccc-CCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcC
Q 015435 229 DADAQSVRMFVADGGECLVAQSYAKNMGLY-GERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKD 307 (407)
Q Consensus 229 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 307 (407)
++ .....++++|+||.++.+ +.+.|++ +++++++.+++. ..+.......+...+..+...++.
T Consensus 183 -----p~-----~~g~di~i~S~sK~~~g~~d~~~G~i--v~~~~~l~~~~~----~~~~~~g~~~s~~~a~l~~~~l~t 246 (366)
T PRK08247 183 -----PL-----EEGADIVIHSATKYLGGHNDVLAGLV--VAKGQELCERLA----YYQNAAGAVLSPFDSWLLIRGMKT 246 (366)
T ss_pred -----ch-----hcCCcEEEeecceeccCCCceeeeEE--ecChHHHHHHHH----HHHHhcCCCCChHHHHHHHhccCc
Confidence 11 123569999999999743 4588888 566555444433 333333334555666666655543
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-c-ccCCceeEEecCC-CHHHHHHhHhh-------------
Q 015435 308 STMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWS-H-IIKQIGMFTFTGL-NSEQVAFMTKE------------- 371 (407)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~-~~~~~~~~~~~~~-~~~~~~~~l~~------------- 371 (407)
+....++.+++++.+.+.|++.+. +. + .++.||+|.|. + ..+...++++.
T Consensus 247 ----------l~~r~~~~~~~a~~l~~~L~~~p~---v~~v~~P~~gg~~sf~-~~~~~~~~~~~~~l~~~~~~~slg~~ 312 (366)
T PRK08247 247 ----------LALRMRQHEENAKAIAAFLNEQPG---VTDVLYPGRGGMLSFR-LQDEEWVNPFLKSLKLITFAESLGGV 312 (366)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHhCCC---eeEEecCCcCcEEEEE-ECCHHHHHHHHHcCCcceEccCCCCC
Confidence 234445668899999999998742 33 3 34489999984 4 23333333332
Q ss_pred ccEEEcCC---------------C------eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 372 YHIYMTSD---------------G------RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 372 ~gi~~~~g---------------g------Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
..+.+.|+ | |||++- |+.+.+++-|.++|+.+
T Consensus 313 ~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGl---E~~~dl~~dl~~al~~~ 365 (366)
T PRK08247 313 ESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGI---ENVEDLIADLKQAFKQV 365 (366)
T ss_pred ceEEECCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhhc
Confidence 22233332 1 788773 88999999999998764
No 172
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.92 E-value=4.2e-22 Score=189.51 Aligned_cols=217 Identities=17% Similarity=0.141 Sum_probs=155.4
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHH----HhhcCc
Q 015435 73 PIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKV----FTLAGL 148 (407)
Q Consensus 73 ~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~----~~~~G~ 148 (407)
+..+..+|++++++++ +. +++++ ++||++|+..+ +...+.+||+|+++.|.|..+... ++..|+
T Consensus 62 ~~p~~~~Le~~iA~~~-g~-------~~~l~--~~sG~~Ai~~a--l~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 129 (400)
T PRK06234 62 GNPTSTEVENKLALLE-GG-------EAAVV--AASGMGAISSS--LWSALKAGDHVVASDTLYGCTFALLNHGLTRYGV 129 (400)
T ss_pred CCccHHHHHHHHHHHh-CC-------CcEEE--EcCHHHHHHHH--HHHHhCCCCEEEEecCccchHHHHHHHHHhhCCe
Confidence 6778999999999998 42 46778 99999999887 455588999999999999876554 367899
Q ss_pred eeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc--CceeeeccccccccCC
Q 015435 149 SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSK--GLLPFFDSAYQGFASG 226 (407)
Q Consensus 149 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~--~~~li~D~~y~~~~~~ 226 (407)
+++.++. .|++++++++. ++++++++ ++|+||||.+.+ +++|+++|+++ |+++|+|++|......
T Consensus 130 ~v~~vd~-------~d~e~l~~~i~--~~tklI~i-esP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~ 196 (400)
T PRK06234 130 EVTFVDT-------SNLEEVRNALK--ANTKVVYL-ETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQ 196 (400)
T ss_pred EEEEECC-------CCHHHHHHHhc--cCCeEEEE-ECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcC
Confidence 9988865 27899999887 56778777 899999999775 78888889997 9999999999766543
Q ss_pred CCCchhHHHHHHHHcCCcEEEEEecCccccccCCCc-ceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHh
Q 015435 227 SLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERV-GALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305 (407)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (407)
. ++ . ....++++|+||.++.+|+++ ||+ +++ +++.+++.... .........+......+...+
T Consensus 197 ~------~l----~-~g~Divv~S~sK~l~g~g~~~gG~v--~~~-~~~~~~l~~~~--~~~~~g~~l~p~~a~l~~~~l 260 (400)
T PRK06234 197 R------PL----Q-LGADVVVHSATKYLNGHGDVIAGFV--VGK-EEFINQVKLFG--IKDMTGSVIGPFEAFLIIRGM 260 (400)
T ss_pred C------ch----h-hCCcEEEeeccccccCCCCceeEEE--Eec-HHHHHHHHHHH--HHHhcCCCCCHHHHHHHHhcc
Confidence 1 11 1 134689999999999899876 777 454 44444332211 111122344555555554444
Q ss_pred cChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015435 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARG 340 (407)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 340 (407)
+. +....++..++...+.+.|++.+
T Consensus 261 ~t----------l~~r~~~~~~na~~~a~~L~~~~ 285 (400)
T PRK06234 261 KT----------LQIRMEKHCKNAMKVAKFLESHP 285 (400)
T ss_pred Cc----------HHHHHHHHHHHHHHHHHHHHcCC
Confidence 43 33444556677788888887654
No 173
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.91 E-value=1.4e-22 Score=192.39 Aligned_cols=331 Identities=15% Similarity=0.125 Sum_probs=198.9
Q ss_pred eeeeeeeeecCCCccccchhHHHHHHHHhccc----cccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCc
Q 015435 34 LNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ----SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSG 109 (407)
Q Consensus 34 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~ 109 (407)
+||+...+ .|....+.+.+++.+++.+-. .....|+...++.++++++++++ +. ++.+++ ++|.
T Consensus 1 ~~f~s~dy---Lgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~-g~------e~al~~--~sG~ 68 (392)
T PLN03227 1 LNFATHDF---LSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFL-GT------ESAILY--SDGA 68 (392)
T ss_pred CCCcCcCc---cCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHh-CC------CcEEEe--cCcH
Confidence 45666655 454555677777777775200 11223666678999999999999 53 144554 5544
Q ss_pred ccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHc---------CCCCcE
Q 015435 110 TGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRA---------APSGAI 180 (407)
Q Consensus 110 t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~---------~~~~~~ 180 (407)
+... .+ +...+++||.|+++++.|.++...+...+.+++.++..+ .-+++.+.+.+.. .+++++
T Consensus 69 ~a~~-~~--i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d----~~~l~~~~~~i~~~~~a~~~~~~~~t~~ 141 (392)
T PLN03227 69 STTS-ST--VAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHND----MKDLRRVLEQVRAQDVALKRKPTDQRRF 141 (392)
T ss_pred HHHH-HH--HHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCC----HHHHHHHHHHhhhhccccccccCCCcEE
Confidence 4444 44 345588999999999999999888888888887776531 1244454444431 124555
Q ss_pred EEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHH--HcCCcEEEEEecCcccccc
Q 015435 181 VLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFV--ADGGECLVAQSYAKNMGLY 258 (407)
Q Consensus 181 v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~~~~ 258 (407)
+++ .+++||+|.+.+ +++|+++|++||+++|+||+|. +...+.... .....+. +..+..+++.|+||.++
T Consensus 142 vi~-E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~-~g~~g~~G~-g~~~~~g~~p~~~~Div~~slsk~~g-- 213 (392)
T PLN03227 142 LVV-EGLYKNTGTLAP---LKELVALKEEFHYRLILDESFS-FGTLGKSGR-GSLEHAGLKPMVHAEIVTFSLENAFG-- 213 (392)
T ss_pred EEE-cCCcCCCCcccC---HHHHHHHHHHcCCEEEEECccc-ccccCCCCC-cHHHHcCCCCCCCceEEEeechhhhh--
Confidence 555 889999999887 7788899999999999999997 443221111 1112111 12244788899999876
Q ss_pred CCCcceeEEeecChhhHHHHHHHHhhhhhcccCC--CChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 015435 259 GERVGALSIVCKTEDVASRVESQLKLVIRPMYSS--PPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDAL 336 (407)
Q Consensus 259 G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 336 (407)
.+.|++ +.++++.+ .+........++ .++..+.++...+.... + .+.++++++++.+++.+.|
T Consensus 214 -~~gg~v---~~~~~~~~----~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~------~-~~~~~~~l~~~~~~l~~~L 278 (392)
T PLN03227 214 -SVGGMT---VGSEEVVD----HQRLSGSGYCFSASAPPFLAKADATATAGEL------A-GPQLLNRLHDSIANLYSTL 278 (392)
T ss_pred -ccCcEE---ecCHHHHH----HHHHhCcCccccCCCCHHHHHHHHHHHHHHh------c-CHHHHHHHHHHHHHHHHHH
Confidence 344777 34444333 332222222222 23445555554443211 1 2356677888999999999
Q ss_pred HhcCCCC------CcccccCCceeEEecCCCH-------------HHHHHhHhhccEEEcCC-------------C--eE
Q 015435 337 SARGTPG------DWSHIIKQIGMFTFTGLNS-------------EQVAFMTKEYHIYMTSD-------------G--RI 382 (407)
Q Consensus 337 ~~~~~~~------~~~~~~~~~~~~~~~~~~~-------------~~~~~~l~~~gi~~~~g-------------g--Ri 382 (407)
++.+.+. .+.......+.+..+.+.. ..+.+.+.++|+.+.+. . |+
T Consensus 279 ~~~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~ 358 (392)
T PLN03227 279 TNSSHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRV 358 (392)
T ss_pred HhcCCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEE
Confidence 8654221 0000011112222222211 13444555589887531 1 77
Q ss_pred EecC-CCCCChhHHHHHHHHHHHhh
Q 015435 383 SMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 383 s~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
++.. +++||++++++.|+++++++
T Consensus 359 ~~~~~~t~eei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 359 VANASHTREDIDKLLTVLGEAVEAI 383 (392)
T ss_pred EecCCCCHHHHHHHHHHHHHHHHHH
Confidence 7754 68999999999999998753
No 174
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.91 E-value=1.9e-22 Score=191.78 Aligned_cols=280 Identities=18% Similarity=0.171 Sum_probs=187.3
Q ss_pred CcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhc---CCCeEEecCCCCCChH----HHHhhcCc
Q 015435 76 GLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY---HQLTIYIPQPTWGNHP----KVFTLAGL 148 (407)
Q Consensus 76 g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~---~gd~Vi~~~p~y~~~~----~~~~~~G~ 148 (407)
...++|+.+++++ +.. +++++++ |+|+|+++.+++ ..... +||+|++++++|+... ...+..|.
T Consensus 44 ~~~~~~~~la~~~-~~~----~~~~v~~--~~g~t~a~~~~~--~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~ 114 (373)
T cd06453 44 AYEAAREKVARFI-NAP----SPDEIIF--TRNTTEAINLVA--YGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGA 114 (373)
T ss_pred HHHHHHHHHHHHh-CCC----CCCeEEE--eCCHHHHHHHHH--HHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCc
Confidence 3567888999888 432 1478999 999999999885 33344 8999999999998753 34457899
Q ss_pred eeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCC
Q 015435 149 SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSL 228 (407)
Q Consensus 149 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~ 228 (407)
+++.++.+ .++.+|++++++.+. ++++++++ ++++||||.+.+ +++|.++|++||++|++|++|...... .
T Consensus 115 ~~~~v~~~--~~~~~d~~~l~~~l~--~~~~~v~~-~~~~~~tG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~-~ 185 (373)
T cd06453 115 KLKVVPVD--DDGQLDLEALEKLLT--ERTKLVAV-THVSNVLGTINP---VKEIGEIAHEAGVPVLVDGAQSAGHMP-V 185 (373)
T ss_pred EEEEeecC--CCCCcCHHHHHHHhc--CCceEEEE-eCcccccCCcCC---HHHHHHHHHHcCCEEEEEhhhhcCcee-e
Confidence 99999983 456799999999997 46677666 899999999876 567888899999999999997633211 0
Q ss_pred CchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhh---------------------
Q 015435 229 DADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIR--------------------- 287 (407)
Q Consensus 229 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~--------------------- 287 (407)
.+ ......++++|++|.++. .++|++ +++ ++ +.+.+.....
T Consensus 186 -----~~----~~~~~d~~~~s~~K~~~~--~g~g~~--~~~-~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 247 (373)
T cd06453 186 -----DV----QDLGCDFLAFSGHKMLGP--TGIGVL--YGK-EE----LLEEMPPYGGGGEMIEEVSFEETTYADLPHK 247 (373)
T ss_pred -----ec----cccCCCEEEeccccccCC--CCcEEE--EEc-hH----HhhcCCCeecCCCccccccccccccCCCccc
Confidence 11 111234667899999885 567888 465 33 3333322110
Q ss_pred cccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc---CCceeEEec--CCCH
Q 015435 288 PMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHII---KQIGMFTFT--GLNS 362 (407)
Q Consensus 288 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~~~~~~~~--~~~~ 362 (407)
....+++...+.++..+++... ....+.++++.+++++++.+.+++++. ++... ..++++.+. +.+.
T Consensus 248 ~~~~t~~~~~~~al~~al~~l~-----~~g~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 319 (373)
T cd06453 248 FEAGTPNIAGAIGLGAAIDYLE-----KIGMEAIAAHEHELTAYALERLSEIPG---VRVYGDAEDRAGVVSFNLEGIHP 319 (373)
T ss_pred cCCCCCCHHHHHHHHHHHHHHH-----HcCHHHHHHHHHHHHHHHHHHHhcCCC---eEEeCCccccCCeEEEEECCcCH
Confidence 0011334334444333333111 012566778888899999999988742 44332 234444432 3455
Q ss_pred HHHHHhHhhccEEEcCC--------------C--eEEecC-CCCCChhHHHHHH
Q 015435 363 EQVAFMTKEYHIYMTSD--------------G--RISMAG-LSSKTVPHLTDAI 399 (407)
Q Consensus 363 ~~~~~~l~~~gi~~~~g--------------g--Ris~~~-~~~e~i~~~~~~l 399 (407)
+.+.+.|.++||.+.+| + |+|++. .+++|++++++.|
T Consensus 320 ~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 320 HDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred HHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 66666667789988643 2 898874 4779999988764
No 175
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.91 E-value=2.2e-22 Score=191.42 Aligned_cols=342 Identities=12% Similarity=0.047 Sum_probs=215.6
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC 106 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t 106 (407)
...++.+||+..|....+.| ..++.+++++.+++. ...............++.+.+++.. . . .+.+++ +
T Consensus 36 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~-~~~~~~~~~~~~~~~~la~~L~~~~-~---~---~~~v~f--~ 104 (408)
T PRK04612 36 DDQGREYLDLAAGIAVCGLG-HNDPDLVAALTEQAG-KLWHTSNVFYSAPPLKLAEELVTAS-R---F---AEKVFL--C 104 (408)
T ss_pred ECCCCEEEEcCccHhhccCC-CCCHHHHHHHHHHHH-hccccccccCCHHHHHHHHHHHhhC-C---C---CCEEEE--c
Confidence 45679999999987655667 667788888888875 1111111101111223444444432 1 1 268999 9
Q ss_pred CCcccHHHHHHHHHHhhc--C----C-CeEEecCCCCCChHHHHhhc-CceeeE---EEeecC--CCCCcChhhHHHHHH
Q 015435 107 LSGTGSLRVGAEFLARHY--H----Q-LTIYIPQPTWGNHPKVFTLA-GLSVKT---YRYYDP--ATRGLNFQGLLEDLR 173 (407)
Q Consensus 107 ~g~t~a~~~~~~~~~~~~--~----g-d~Vi~~~p~y~~~~~~~~~~-G~~~~~---v~~~~~--~~~~~d~~~l~~~i~ 173 (407)
+||++|++.++++.+... . + .+|+....+|++........ |..... .+.... .-...|++.+++.+.
T Consensus 105 ~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~ 184 (408)
T PRK04612 105 NSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMA 184 (408)
T ss_pred CchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhC
Confidence 999999999998887652 2 2 36888888888775543322 111000 000000 001127788888875
Q ss_pred cCCCCcEEEEecCCCCCCCCCCC--HHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEec
Q 015435 174 AAPSGAIVLLHACAHNPTGVDPT--LEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSY 251 (407)
Q Consensus 174 ~~~~~~~v~i~~~p~NPtG~~~~--~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 251 (407)
+++..+++ ..|.+++|.+++ .+.+++|.++|++||+++|+||+|.++...+ ..+.. ...+....+.+|
T Consensus 185 --~~~~aavi-~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G---~~~a~----~~~~~~pdi~t~ 254 (408)
T PRK04612 185 --GGDVAAVM-LEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTG---TLFAH----WQEQVTPDIVTL 254 (408)
T ss_pred --CCCEEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC---chhhh----hhcCCCCCEEEE
Confidence 34445445 567888876655 6789999999999999999999999887754 12221 122445667789
Q ss_pred CccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHH
Q 015435 252 AKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQ 331 (407)
Q Consensus 252 sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (407)
||.++ +|+|+||+ +++ +++.+.+.......+++.+++++.++.+.|+... + +.+.++++++.++
T Consensus 255 ~K~l~-~G~piga~--~~~-----~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~------~--~~l~~~~~~~g~~ 318 (408)
T PRK04612 255 AKALG-GGFPIGAM--LAG-----PKVAETMQFGAHGTTFGGNPLAAAVARVALRKLA------S--PQIAANVARQSAA 318 (408)
T ss_pred cchhc-CCCceEEE--EEC-----HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHH------h--ccHHHHHHHHHHH
Confidence 99999 89999999 566 3344444433334455778888998888876431 1 3556777778888
Q ss_pred HHHHHHhcCCCC-CcccccCCceeEEec--CC---CHHHHHHhHhhccEEEcCCC----eEEecC-CCCCChhHHHHHHH
Q 015435 332 LFDALSARGTPG-DWSHIIKQIGMFTFT--GL---NSEQVAFMTKEYHIYMTSDG----RISMAG-LSSKTVPHLTDAIH 400 (407)
Q Consensus 332 l~~~l~~~~~~~-~~~~~~~~~~~~~~~--~~---~~~~~~~~l~~~gi~~~~gg----Ris~~~-~~~e~i~~~~~~l~ 400 (407)
+.+.|+++.... .+..+...|.++.+. .- ....+...+.++|+.+.+.| |+.... ++++++++++++|+
T Consensus 319 l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~~g~~~lRl~Ppl~it~eeid~~l~~l~ 398 (408)
T PRK04612 319 LRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQAGPDVLRFVPALNLTDAELADGLARLR 398 (408)
T ss_pred HHHHHHHHHhhCCCeeeeeccceEEEEEecCchhhHHHHHHHHHHHCCeEEeeCCCCEEEEcCCccCCHHHHHHHHHHHH
Confidence 888777653110 122334455444322 11 12334455667999998765 665432 58899999999999
Q ss_pred HHHHh
Q 015435 401 AAVTR 405 (407)
Q Consensus 401 ~~l~~ 405 (407)
+++++
T Consensus 399 ~~l~~ 403 (408)
T PRK04612 399 LALAD 403 (408)
T ss_pred HHHHH
Confidence 98865
No 176
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.91 E-value=4e-22 Score=190.92 Aligned_cols=340 Identities=13% Similarity=0.135 Sum_probs=211.8
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCC--CCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYL--PIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~--~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
...++++||+..|....+.| ..++.+++++.+++. ......+. +..-..++.+.+++.. ... ..+.+++
T Consensus 36 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~--~~~~~~~~~~~~~~~~~la~~l~~~~-p~~----~~~~~~f- 106 (421)
T PRK09792 36 DVEGNEYIDFAAGIAVLNTG-HRHPDLVAAVEQQLQ--QFTHTAYQIVPYESYVTLAEKINALA-PVS----GQAKTAF- 106 (421)
T ss_pred eCCCCEEEEccCchhhhcCC-CCCHHHHHHHHHHHH--hccCcccCccCCHHHHHHHHHHHHhC-CCC----CCceEEE-
Confidence 45678999999887655667 667788888888876 21111121 1122234555555533 111 1257899
Q ss_pred ecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhc-Cc-------------eeeEEEeecCCCCCc----Chh
Q 015435 105 QCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLA-GL-------------SVKTYRYYDPATRGL----NFQ 166 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~-G~-------------~~~~v~~~~~~~~~~----d~~ 166 (407)
++||++|++.++++.+......+|+....+|++........ |. .+..+|..+.. .++ +++
T Consensus 107 -~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~ 184 (421)
T PRK09792 107 -FTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLD 184 (421)
T ss_pred -eCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHH
Confidence 99999999999988876655567888888888775433221 11 12233331111 122 246
Q ss_pred hHHHHHHc---CCCCcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcC
Q 015435 167 GLLEDLRA---APSGAIVLLHACAHNPTGVDP-TLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADG 242 (407)
Q Consensus 167 ~l~~~i~~---~~~~~~v~i~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~ 242 (407)
.+++.+.+ ..+.+++++ ...++|+|..+ +.+.+++|.++|++||+++|+||++.+|.+.+ ..+....+....
T Consensus 185 ~l~~~~~~~~~~~~iaavi~-EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G---~~~a~~~~~~~p 260 (421)
T PRK09792 185 AIERLFKSDIEAKQVAAIIF-EPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTG---KLFAMDHYADKP 260 (421)
T ss_pred HHHHHHHhccCCCceEEEEE-ccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCC---chhHHHhcCCCC
Confidence 77777753 233456666 44599999865 99999999999999999999999999998764 234444332222
Q ss_pred CcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHH
Q 015435 243 GECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMA 322 (407)
Q Consensus 243 ~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 322 (407)
+ +.+|||.++ +|+|+||+ +++ +++.+.+.......+.+.+++++.++.+.++-.. + ....
T Consensus 261 D----i~t~gK~l~-~G~pigav--~~~-----~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~------~--~~~~ 320 (421)
T PRK09792 261 D----LMTMAKSLA-GGMPLSGV--VGN-----ANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIID------K--ESLC 320 (421)
T ss_pred c----EEEeehhhc-CCCceEEE--EEc-----HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHH------h--hhHH
Confidence 2 567999999 89999998 565 4455444333333455788888886666654221 1 0222
Q ss_pred HHHHHHHHHHHHHHHhcC--CCCCcccccCCc-eeEEecCCC-----------HHHHHHhHhhccEEEcCCC------eE
Q 015435 323 DRIISMRQQLFDALSARG--TPGDWSHIIKQI-GMFTFTGLN-----------SEQVAFMTKEYHIYMTSDG------RI 382 (407)
Q Consensus 323 ~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~-~~~~~~~~~-----------~~~~~~~l~~~gi~~~~gg------Ri 382 (407)
+++++..+++.+.++.+- .+ . +..+.| |++.|+.+. ...+...+.++||.+.+.| |+
T Consensus 321 ~~~~~~g~~l~~~l~~l~~~~p--~-v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~g~~~~~irl 397 (421)
T PRK09792 321 ERANQLGQRLKNTLIDAKESVP--A-IAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRF 397 (421)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC--C-cceecccceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeecCCCCCEEEE
Confidence 333344444444444331 11 1 234445 777777541 1223344455899986532 77
Q ss_pred EecC-CCCCChhHHHHHHHHHHH
Q 015435 383 SMAG-LSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 383 s~~~-~~~e~i~~~~~~l~~~l~ 404 (407)
.++. ++++++++++++|.++++
T Consensus 398 ~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 398 LYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred eCCCcCCHHHHHHHHHHHHHHHh
Confidence 7654 688999999999999875
No 177
>PLN02624 ornithine-delta-aminotransferase
Probab=99.91 E-value=4.4e-22 Score=193.03 Aligned_cols=337 Identities=11% Similarity=0.065 Sum_probs=211.2
Q ss_pred cCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 28 DTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 28 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
..+.++|||..|....+.| ..++++++++.+++.+ ......+.......++.+.++++. +. +.+++ ++
T Consensus 72 ~dG~~ylD~~sg~~~~~~G-h~~p~v~~ai~~ql~~-~~~~~~~~~~~~~~~la~~L~~~~-~~-------~~~~f--~~ 139 (474)
T PLN02624 72 PEGKKYLDFLSAYSAVNQG-HCHPKIIKALTEQAEK-LTLSSRAFYNDKFPEFAEYLTSMF-GY-------DMVLP--MN 139 (474)
T ss_pred CCCCEEEEcccchhcccCC-CCCHHHHHHHHHHHHh-cCCcccccCCHHHHHHHHHHHhhc-CC-------CeEEE--eC
Confidence 4578999999886545566 6678888888888862 111111122344566777777765 32 68999 99
Q ss_pred CcccHHHHHHHHHHhhc-------CCC-eEEecCCCCCChHHHHhhcCce-------------eeEEEeecCCCCCcChh
Q 015435 108 SGTGSLRVGAEFLARHY-------HQL-TIYIPQPTWGNHPKVFTLAGLS-------------VKTYRYYDPATRGLNFQ 166 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~-------~gd-~Vi~~~p~y~~~~~~~~~~G~~-------------~~~v~~~~~~~~~~d~~ 166 (407)
+|++|++.++++..... +++ .|+...-+|.+..........+ +..++. -|++
T Consensus 140 SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~ 212 (474)
T PLN02624 140 TGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-------GDLD 212 (474)
T ss_pred ChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-------CCHH
Confidence 99999999988776642 133 4677777777664333222111 112211 2678
Q ss_pred hHHHHHHcCCCCcEEEEecCCCCCCCCCCCHH-HHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcE
Q 015435 167 GLLEDLRAAPSGAIVLLHACAHNPTGVDPTLE-QWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245 (407)
Q Consensus 167 ~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~-~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (407)
.+++.+...+.....+++.+++|++|.+++++ .+++|.++|++||+++|+||+|.+++..+ ........ ....++
T Consensus 213 ~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG---~~~a~~~~-~i~pDi 288 (474)
T PLN02624 213 ALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTG---KMLACDWE-EVRPDV 288 (474)
T ss_pred HHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCc---chhhHHhc-CCCCCE
Confidence 88888864433344444488999999988766 59999999999999999999999887654 22222111 111222
Q ss_pred EEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHH
Q 015435 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRI 325 (407)
Q Consensus 246 i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 325 (407)
+ ++||.++.+++++|++ +.+ ++ +...+.......+++.+++.+.++.+.++... + ..+.++.
T Consensus 289 v---~lsK~lggG~~pigav--~~~-~~----i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~------~--~~l~~~~ 350 (474)
T PLN02624 289 V---ILGKALGGGVIPVSAV--LAD-KD----VMLCIKPGEHGSTFGGNPLASAVAMAALQVVQ------D--EKLAERS 350 (474)
T ss_pred E---EecccccCCCCcceee--eec-HH----HHhHhccCCcCCCCCCCHHHHHHHHHHHHHHH------h--chHHHHH
Confidence 3 3689999777999999 455 33 33333323333344678888888887775321 1 1233455
Q ss_pred HHHHHHHHHHHHhcC--CCCCcccccCCceeEEe-cCCC------HHHHHHhHhhccEEEcCCC----eEEec-CCCCCC
Q 015435 326 ISMRQQLFDALSARG--TPGDWSHIIKQIGMFTF-TGLN------SEQVAFMTKEYHIYMTSDG----RISMA-GLSSKT 391 (407)
Q Consensus 326 ~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~l~~~gi~~~~gg----Ris~~-~~~~e~ 391 (407)
.++.+++.+.|+++. .+..+....+.|.++.+ ++.+ ...+.+.|.++||.+.|++ ||++. .+++++
T Consensus 351 ~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~p~~~~~lR~~p~l~~t~e~ 430 (474)
T PLN02624 351 AKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPKLGPVSAYDVCLKLKERGLLAKPTHDTIIRLAPPLSISEDE 430 (474)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCCcChHHHHHHHHHHHhCCeEEecCCCCEEEEECCccCCHHH
Confidence 555666666665542 11112333455555542 2221 1233344566899999875 77653 258899
Q ss_pred hhHHHHHHHHHHHh
Q 015435 392 VPHLTDAIHAAVTR 405 (407)
Q Consensus 392 i~~~~~~l~~~l~~ 405 (407)
+++++++|+++++.
T Consensus 431 id~~l~~L~~~l~~ 444 (474)
T PLN02624 431 LQECSKALSDVLEH 444 (474)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998853
No 178
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.91 E-value=3.9e-23 Score=194.34 Aligned_cols=302 Identities=11% Similarity=0.015 Sum_probs=202.2
Q ss_pred cccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhh--c-
Q 015435 48 PLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARH--Y- 124 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~--~- 124 (407)
+.+...+...+.... +. ....|....+..++++++++++....+.+.++.++++ |+|||+++.+++..+... .
T Consensus 9 ~~~~~~~~~~~~~~~-n~-~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~--t~ggt~a~~~al~~~~~~~~~~ 84 (345)
T cd06450 9 MDPPALLLEMLTSAK-NA-IDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVF--TSGGSESNLLALLAARDRARKR 84 (345)
T ss_pred CcHHHHHHHHHHHhc-CC-CCcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEE--eCChhHHHHHHHHHHHHHhhhh
Confidence 445555555555554 22 2344877888899999998888443333223468999 999999999886444321 1
Q ss_pred -------C--CCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC---C-CCcEEEEecCCCCCC
Q 015435 125 -------H--QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA---P-SGAIVLLHACAHNPT 191 (407)
Q Consensus 125 -------~--gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~-~~~~v~i~~~p~NPt 191 (407)
+ ++.|++++++|..+...+...|.+++.++++ + ++.+|++++++.+.+. . ++.++++ ++++|||
T Consensus 85 ~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~-~~~~~~t 161 (345)
T cd06450 85 LKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVD-E-DGRMDPEALEAAIDEDKAEGLNPIMVVA-TAGTTDT 161 (345)
T ss_pred hhcccccccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeC-C-CCCcCHHHHHHHHHHHHHCCCCcEEEEE-ecccCCC
Confidence 2 3478888999999989989889999999983 3 3589999999999731 1 3445444 8899999
Q ss_pred CCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecC
Q 015435 192 GVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKT 271 (407)
Q Consensus 192 G~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~ 271 (407)
|.+ +++++|+++|+++|+++++|++|..+.... +..... .....+...+..|++|.++ ++.++|++ +.+
T Consensus 162 G~~---~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~---~~~~~~-~~~~~~~d~~~~s~~K~l~-~p~g~g~~--~~~- 230 (345)
T cd06450 162 GAI---DPLEEIADLAEKYDLWLHVDAAYGGFLLPF---PEPRHL-DFGIERVDSISVDPHKYGL-VPLGCSAV--LVR- 230 (345)
T ss_pred CCC---CCHHHHHHHHHHhCCeEEEechhhHHHhhC---hhhHHH-hcCccccCEEEEchhHhhC-CCcchHHH--HHH-
Confidence 996 468899999999999999999998776421 111110 1111233466789999765 56788887 232
Q ss_pred hhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc-cC
Q 015435 272 EDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHI-IK 350 (407)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~ 350 (407)
...+.++...+.. ..+++.+++..++++++.+.|++.+. +.+. .+
T Consensus 231 -----------------------~~~~~~~l~~l~~--------~g~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~ 276 (345)
T cd06450 231 -----------------------ALKLWATLRRFGR--------DGYGEHIDRIVDLAKYLAELIRADPG---FELLGEP 276 (345)
T ss_pred -----------------------HHHHHHHHHHHhH--------HHHHHHHHHHHHHHHHHHHHHhcCCC---eEEecCC
Confidence 3334444444432 33567778888899999999988753 4433 35
Q ss_pred CceeEEec--C-----CCHHHHHHhHhhccEEEcCC------C--eEEecC-C-CCCChhHHHHHHHH
Q 015435 351 QIGMFTFT--G-----LNSEQVAFMTKEYHIYMTSD------G--RISMAG-L-SSKTVPHLTDAIHA 401 (407)
Q Consensus 351 ~~~~~~~~--~-----~~~~~~~~~l~~~gi~~~~g------g--Ris~~~-~-~~e~i~~~~~~l~~ 401 (407)
..+++.|. + .+...+.+.|.++|+.+.++ + |+++.. . ++++++++++.|++
T Consensus 277 ~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 277 NLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred ceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 56666654 2 22334555556665433321 1 999875 3 67999999999875
No 179
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.91 E-value=4.6e-22 Score=190.52 Aligned_cols=344 Identities=14% Similarity=0.116 Sum_probs=219.7
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccC--CCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEY--LPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
...+++++|+..|....+.| ..++.+++++.+++. ......+ .+.....++.+.+++.. ...+ .+.+++
T Consensus 36 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~--~~~~~~~~~~~~~~~~~la~~l~~~~-p~~~----~~~~~f- 106 (421)
T PRK06777 36 DVEGREYIDFAAGIAVLNTG-HRHPKVVAAVRQQLD--QFTHTAYQIVPYASYVTLAERINALA-PIDG----PAKTAF- 106 (421)
T ss_pred eCCCCEEEEcccCHHhhccC-CCCHHHHHHHHHHHh--hcccccccccCChHHHHHHHHHHHhC-CCCC----CceEEE-
Confidence 45678999999886555566 667788888888876 2111112 12223345555565544 2111 268999
Q ss_pred ecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhc-Cce-------------eeEEEeecCCC---CCcChhh
Q 015435 105 QCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLA-GLS-------------VKTYRYYDPAT---RGLNFQG 167 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~-G~~-------------~~~v~~~~~~~---~~~d~~~ 167 (407)
+++|++|++.++++.+......+|+...-+|++........ |.. +..++..+... ...+++.
T Consensus 107 -~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 185 (421)
T PRK06777 107 -FTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSS 185 (421)
T ss_pred -eCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHH
Confidence 99999999999988877655567888888888776544321 210 11112211000 0113566
Q ss_pred HHHHHHc--CC-CCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCC
Q 015435 168 LLEDLRA--AP-SGAIVLLHACAHNPTGV-DPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGG 243 (407)
Q Consensus 168 l~~~i~~--~~-~~~~v~i~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~ 243 (407)
+++.+.+ .+ +..++++ ...++..|. +++++.+++|.++|++||+++|+||+|.++.+.+ ..++...+.. ..
T Consensus 186 l~~~~~~~~~~~~iaavi~-Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g---~~~~~~~~~~-~p 260 (421)
T PRK06777 186 VERLFKADIAPDQVAAILL-EPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTG---KLFAMEYYDV-KP 260 (421)
T ss_pred HHHHHHhccCCCceEEEEE-CCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCC---chhhhhhcCC-CC
Confidence 7777752 22 3345555 445667775 5889999999999999999999999999987764 2333333211 12
Q ss_pred cEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHH
Q 015435 244 ECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMAD 323 (407)
Q Consensus 244 ~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 323 (407)
++ .++||.++ +|+|+||+ +++ +++.+.+.......+++.+++++.++.+.|+... + +.+.+
T Consensus 261 Di---v~~sK~l~-~G~pigav--~~~-----~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~------~--~~l~~ 321 (421)
T PRK06777 261 DL---ITMAKSLG-GGMPISAV--VGR-----AEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIA------E--EKLCQ 321 (421)
T ss_pred CE---Eeeehhhc-CCCceEEE--EEc-----HHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHH------h--ccHHH
Confidence 22 26999999 89999999 565 4455444433334556788999999998886331 1 35667
Q ss_pred HHHHHHHHHHHHHHhcCCC-CCcccccCCceeEEe-cCC------CHHH---HHHhHhhccEEEcCCC------eEEec-
Q 015435 324 RIISMRQQLFDALSARGTP-GDWSHIIKQIGMFTF-TGL------NSEQ---VAFMTKEYHIYMTSDG------RISMA- 385 (407)
Q Consensus 324 ~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~-~~~------~~~~---~~~~l~~~gi~~~~gg------Ris~~- 385 (407)
+++++.+++.+.|+++... ..+..+.+.|.++.+ +.. +.+. +...+.++||.+.|++ ||++.
T Consensus 322 ~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~g~~lr~~ppl 401 (421)
T PRK06777 322 RALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVHGNVIRFLYPL 401 (421)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCC
Confidence 7777888888888765210 013445677877764 221 1222 2233455899998864 77764
Q ss_pred CCCCCChhHHHHHHHHHHH
Q 015435 386 GLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 386 ~~~~e~i~~~~~~l~~~l~ 404 (407)
.++++++++++++|.+++.
T Consensus 402 ~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 402 TIPDAQFSKALNILTRLLA 420 (421)
T ss_pred CCCHHHHHHHHHHHHHHHh
Confidence 2588999999999998874
No 180
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.91 E-value=2.2e-22 Score=182.57 Aligned_cols=318 Identities=20% Similarity=0.246 Sum_probs=220.9
Q ss_pred cccchhHHHHHHHHhc---cccccccCCC--CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHh
Q 015435 48 PLVLNVVRKAEQLLVN---DQSRVKEYLP--IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLAR 122 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~---~~~~~~~y~~--~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~ 122 (407)
|..+.++++++..+.. ++...|.|+. -..+++.|+.+|+.+ +. ++++|+| |+|+|++.+++++-...
T Consensus 12 p~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~ll-ga-----~~~eIiF--TSG~TEsnNlaI~g~~~ 83 (386)
T COG1104 12 PVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLL-GA-----DPEEIIF--TSGATESNNLAIKGAAL 83 (386)
T ss_pred CCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHh-CC-----CCCeEEE--ecCCcHHHHHHHHhhHH
Confidence 3344555555444431 2333444432 223788899999988 43 3589999 99999999998643212
Q ss_pred hc----CCCeEEecCCCCCChHHHHhhc---CceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCC
Q 015435 123 HY----HQLTIYIPQPTWGNHPKVFTLA---GLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDP 195 (407)
Q Consensus 123 ~~----~gd~Vi~~~p~y~~~~~~~~~~---G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~ 195 (407)
.. .|..|+++.-.++...+.++.+ |.+|.++|. +.++.+|+++|++++. +++.+|.| ...||.||++
T Consensus 84 a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V--~~~G~v~~e~L~~al~--~~T~LVSi-m~aNnE~G~I- 157 (386)
T COG1104 84 AYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPV--DSNGLVDLEQLEEALR--PDTILVSI-MHANNETGTI- 157 (386)
T ss_pred hhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCC--CCCCeEcHHHHHHhcC--CCceEEEE-EecccCeeec-
Confidence 22 4778999999999888877765 999999999 3468899999999999 77888877 7889999995
Q ss_pred CHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhH
Q 015435 196 TLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVA 275 (407)
Q Consensus 196 ~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~ 275 (407)
.++++|.++|+++|+++.+|.+. .++--+.+ + ....-.+...|-.|.+|..| +|.++ .+ +.
T Consensus 158 --QpI~ei~~i~k~~~i~fHvDAvQ-a~Gkipi~-----~----~~~~vD~ls~SaHK~~GpkG--iGaLy--v~-~~-- 218 (386)
T COG1104 158 --QPIAEIGEICKERGILFHVDAVQ-AVGKIPID-----L----EELGVDLLSFSAHKFGGPKG--IGALY--VR-PG-- 218 (386)
T ss_pred --ccHHHHHHHHHHcCCeEEEehhh-hcCceecc-----c----cccCcceEEeehhhccCCCc--eEEEE--EC-CC--
Confidence 56888888899999999999974 34432211 1 11124577888999999887 68884 33 21
Q ss_pred HHHHHHHhh-----hhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhc-CC---CCCcc
Q 015435 276 SRVESQLKL-----VIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSAR-GT---PGDWS 346 (407)
Q Consensus 276 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~---~~~~~ 346 (407)
-++...+.. ..+.. +.+.++..+...+++... +.++...+++.+.|+.|.+.|.+. +. ...-.
T Consensus 219 ~~~~p~i~GGgQE~g~RsG--Tenv~~Ivg~~~A~~~a~------~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~ 290 (386)
T COG1104 219 VRLEPLIHGGGQERGLRSG--TENVPGIVGFGKAAEIAV------EELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDE 290 (386)
T ss_pred CccCceeccCcCCCCCCCC--CccHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcc
Confidence 111111111 12222 334444444444444321 446677788999999999999975 31 11112
Q ss_pred cccCCceeEEecCCCHHHHHHhHhhccEEEcCC-----------------C----------eEEecC-CCCCChhHHHHH
Q 015435 347 HIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSD-----------------G----------RISMAG-LSSKTVPHLTDA 398 (407)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~g-----------------g----------Ris~~~-~~~e~i~~~~~~ 398 (407)
...|..-.|.+.++..|.+...|+.+||+++.| | |||++. .+++|++++++.
T Consensus 291 ~rlP~~~~~~f~gv~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~ 370 (386)
T COG1104 291 PRLPNILNFSFPGVEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEA 370 (386)
T ss_pred cCCCCeEEEEeCCCcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHH
Confidence 335566667888999999999999999999876 1 999987 467999999999
Q ss_pred HHHHHHhh
Q 015435 399 IHAAVTRM 406 (407)
Q Consensus 399 l~~~l~~~ 406 (407)
++++++++
T Consensus 371 l~~~i~~l 378 (386)
T COG1104 371 LKEIIKRL 378 (386)
T ss_pred HHHHHHHH
Confidence 99998875
No 181
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=2.6e-21 Score=182.31 Aligned_cols=319 Identities=20% Similarity=0.190 Sum_probs=217.5
Q ss_pred cccchhHHHHHHHHhccccccc--cCCC----CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHH
Q 015435 48 PLVLNVVRKAEQLLVNDQSRVK--EYLP----IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLA 121 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~--~y~~----~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~ 121 (407)
+.|..++.++.+.+.......+ .+.. ..-+++.|+.+++++ +... .++|++ |+|+|+++.++...+.
T Consensus 33 ~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~-~a~~----~~eIvf--t~~tT~aln~va~~l~ 105 (405)
T COG0520 33 QKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFL-NADS----SDEIVF--TRGTTEALNLVARGLG 105 (405)
T ss_pred cCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHh-CCCC----CCeEEE--eCChhHHHHHHHHHhh
Confidence 4477777777666531111222 1211 114778899999998 4321 388999 9999999999964443
Q ss_pred h-hcCCCeEEecCCCCCChHHHHh----hcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCC
Q 015435 122 R-HYHQLTIYIPQPTWGNHPKVFT----LAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPT 196 (407)
Q Consensus 122 ~-~~~gd~Vi~~~p~y~~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~ 196 (407)
. +.+||+|++++-.|+...-.++ ..|++++.+|++ +++.++.+.++..+. ++++++.+ +..+|.||++.
T Consensus 106 ~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~--~~g~~~~~~~~~~i~--~~Tklvai-s~vSn~tG~~~- 179 (405)
T COG0520 106 RSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD--DDGLLDLDALEKLIT--PKTKLVAL-SHVSNVTGTVN- 179 (405)
T ss_pred hhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC--CCCCcCHHHHHHhcC--CCceEEEE-ECccccccccc-
Confidence 2 5789999999988876554443 569999999993 567899999999887 77888888 89999999955
Q ss_pred HHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCc-cccccCCCcceeEEeecChhhH
Q 015435 197 LEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAK-NMGLYGERVGALSIVCKTEDVA 275 (407)
Q Consensus 197 ~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK-~~~~~G~r~G~~~~v~~~~~~~ 275 (407)
++++|+++|+++|+++++|.+.+.-... . .+ ...+..++.+|..| .+|..| +|.+ .++ +++.
T Consensus 180 --pv~~I~~la~~~ga~v~VDaaq~~~h~~-i-----dv----~~l~~Df~afsgHKwl~gP~G--iGvL--y~r-~~~l 242 (405)
T COG0520 180 --PVKEIAELAHEHGALVLVDAAQAAGHLP-I-----DV----QELGCDFLAFSGHKWLLGPTG--IGVL--YVR-KELL 242 (405)
T ss_pred --hHHHHHHHHHHcCCEEEEECccccCccC-C-----Cc----hhcCCCEEEEcccccccCCCc--eEEE--EEc-hHHH
Confidence 5999999999999999999985433321 1 11 22356789999999 666446 6777 455 3333
Q ss_pred HHHHHHHhh------------------hhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015435 276 SRVESQLKL------------------VIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALS 337 (407)
Q Consensus 276 ~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 337 (407)
+.+...... ..+....+++..+...+..+++-.. ....++..++.++..+++.+.|+
T Consensus 243 ~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~-----~ig~~~i~~~e~~L~~~~~~~L~ 317 (405)
T COG0520 243 EELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLL-----EIGMEAIEAHERELTEYLLEGLS 317 (405)
T ss_pred hhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHH-----HHhHHHHHHHHHHHHHHHHHHHh
Confidence 332110000 0011112333333333333333211 12356788889999999999999
Q ss_pred hcCCCCCcccccC----CceeEEec--CCCHHHHHHhHhhccEEEcCCC----------------eEEecC-CCCCChhH
Q 015435 338 ARGTPGDWSHIIK----QIGMFTFT--GLNSEQVAFMTKEYHIYMTSDG----------------RISMAG-LSSKTVPH 394 (407)
Q Consensus 338 ~~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~l~~~gi~~~~gg----------------Ris~~~-~~~e~i~~ 394 (407)
+++. +.+..+ .++.+.|. +.....+...|.++||.++.|. |+|++. .++||+++
T Consensus 318 ~~~~---v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~ 394 (405)
T COG0520 318 ELPG---VEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDR 394 (405)
T ss_pred cCCC---eEEecCCcccCceEEEEEeCCCCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHH
Confidence 8864 555433 56766654 7778888888888899998871 999875 47799999
Q ss_pred HHHHHHHHHH
Q 015435 395 LTDAIHAAVT 404 (407)
Q Consensus 395 ~~~~l~~~l~ 404 (407)
+++.|+++.+
T Consensus 395 l~~aL~~~~~ 404 (405)
T COG0520 395 LLEALKKALA 404 (405)
T ss_pred HHHHHHHHhh
Confidence 9999998764
No 182
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.91 E-value=4.5e-22 Score=189.40 Aligned_cols=288 Identities=18% Similarity=0.165 Sum_probs=190.0
Q ss_pred cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhh-cCCCeEEecCCCCCChHHHH---hhcCceeeE
Q 015435 77 LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARH-YHQLTIYIPQPTWGNHPKVF---TLAGLSVKT 152 (407)
Q Consensus 77 ~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~-~~gd~Vi~~~p~y~~~~~~~---~~~G~~~~~ 152 (407)
+.++|+.+++++ +. ++++|++ |+|+|+++.+++..+... .+||.|+++..+|+.+...+ +..|.+++.
T Consensus 44 ~~~~r~~la~~~-g~-----~~~~i~~--t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~ 115 (379)
T TIGR03402 44 VEEAREQVAKLL-GA-----EPDEIIF--TSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTY 115 (379)
T ss_pred HHHHHHHHHHHh-CC-----CCCeEEE--eCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEE
Confidence 567788888887 42 2478999 999999999885433222 35688999888887765443 356999999
Q ss_pred EEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchh
Q 015435 153 YRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADA 232 (407)
Q Consensus 153 v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~ 232 (407)
+|.+ .++.+|++++++.++ ++++++++ ++++||||.+++ +++|+++|+++|+++++|++++. ...+. +
T Consensus 116 v~~~--~~g~~~~~~l~~~i~--~~~~lv~i-~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~~~~~-g~~~~--~- 183 (379)
T TIGR03402 116 LPVD--EEGRLDLEELRAAIT--DDTALVSV-MWANNETGTIFP---IEEIGEIAKERGALFHTDAVQAV-GKIPI--D- 183 (379)
T ss_pred EccC--CCCcCCHHHHHHhcC--CCcEEEEE-EcccCCeeeccc---HHHHHHHHHHcCCEEEEECcccc-ccccc--C-
Confidence 9883 346699999999987 56666666 899999999887 56788889999999999998753 21111 1
Q ss_pred HHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhh-h--hhcccCCCChhHHHHHHHHhcChh
Q 015435 233 QSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKL-V--IRPMYSSPPIHGASIVATILKDST 309 (407)
Q Consensus 233 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~l~~~~ 309 (407)
+ ......+++.|.+|.+|.+| +|++ +.+... .+...... . ......+++..+..++..+++-.
T Consensus 184 --~----~~~~~D~~~~s~~K~~gp~G--~g~l--~v~~~~---~~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~- 249 (379)
T TIGR03402 184 --L----KEMNIDMLSLSGHKLHGPKG--VGAL--YIRKGT---RFRPLLRGGHQERGRRAGTENVPGIVGLGKAAELA- 249 (379)
T ss_pred --c----ccCCCCEEEEcHHHcCCCCc--eEEE--EECCCC---CCCCcccCCccCCCcCCCCccHHHHHHHHHHHHHH-
Confidence 1 11233477778889777556 6777 344221 11111100 0 00112244555555555545422
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCcccccC---C--cee-EEecCCCHHHHHHhHhhccEEEcCC---
Q 015435 310 MYKEWTLELKAMADRIISMRQQLFDALSA-RGTPGDWSHIIK---Q--IGM-FTFTGLNSEQVAFMTKEYHIYMTSD--- 379 (407)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~---~--~~~-~~~~~~~~~~~~~~l~~~gi~~~~g--- 379 (407)
.+..++..++++++++++.+.|.+ ++. +.+..+ . +.+ |.+.+.+.+.+...|+++||.+.+|
T Consensus 250 -----~~~~~~~~~~~~~l~~~l~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c 321 (379)
T TIGR03402 250 -----TEHLEEENTRVRALRDRLEAGLLARIPD---ARLNGDPTKRLPNTVNISFEYIEGEAILLLLDMEGICASSGSAC 321 (379)
T ss_pred -----HHhHHHHHHHHHHHHHHHHHHHHhhCCC---EEEeCCCccCCCCEEEEEecCCCHHHHHHhhccCCEEEEchhhc
Confidence 134566678888899999998875 432 333321 1 122 2334567777777778899998652
Q ss_pred ----------------------C--eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 380 ----------------------G--RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 380 ----------------------g--Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
| |+|++. .+++|++++++.|+++++.+
T Consensus 322 ~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~ 373 (379)
T TIGR03402 322 TSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARL 373 (379)
T ss_pred CCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3 999876 47799999999999988653
No 183
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.91 E-value=7.3e-22 Score=190.96 Aligned_cols=345 Identities=12% Similarity=0.102 Sum_probs=208.1
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhcccccccc--CCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKE--YLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
...++++||+..|....+.| ..++.+++++.+++. ...... +.......++.+.+++...+. ..+.+++
T Consensus 50 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~--~~~~~~~~~~~~~~~~~la~~L~~~~p~~-----~~~~v~f- 120 (451)
T PRK06918 50 DVDGNQYIDFAGAIGTINVG-HSHPKVKEALHKQVD--QYIHTGFNVMMYEPYIELAEKLAALAPGS-----FDKKVLF- 120 (451)
T ss_pred eCCCCEEEEcCCchhhcCCC-CCCHHHHHHHHHHHH--hccCccccccccHHHHHHHHHHHHhCCCC-----CCCEEEE-
Confidence 34678999999997655667 667788888888876 211111 111222344555555544111 0157999
Q ss_pred ecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhc-Cc-------------eeeEEEeecCC--CCCcC----
Q 015435 105 QCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLA-GL-------------SVKTYRYYDPA--TRGLN---- 164 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~-G~-------------~~~~v~~~~~~--~~~~d---- 164 (407)
++||++|++.++++.+......+|+....+|++........ |. .+..+|..+.. ..+..
T Consensus 121 -~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (451)
T PRK06918 121 -LNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQY 199 (451)
T ss_pred -cCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHH
Confidence 99999999999998877765567999898888776544322 11 12222221100 01111
Q ss_pred ----hhhHHHHHHc--CCCCcEEEEecCCCCCC-CCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHH
Q 015435 165 ----FQGLLEDLRA--APSGAIVLLHACAHNPT-GVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVR 236 (407)
Q Consensus 165 ----~~~l~~~i~~--~~~~~~v~i~~~p~NPt-G~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~ 236 (407)
.+.+++.+.. .++..+.+| ..|.++. |.+ .+.+.+++|.++|++||+++|+||+|.+|.+.+ ..++..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~iAavi-~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g---~~~a~~ 275 (451)
T PRK06918 200 DDFMIEEFKNFFISEVAPETIAAVV-MEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTG---KYFAIE 275 (451)
T ss_pred HHHHHHHHHHHHHhhcCCCceEEEE-ECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccC---ceehhH
Confidence 1223333321 123333344 3455554 654 556669999999999999999999999998764 223333
Q ss_pred HHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHH
Q 015435 237 MFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTL 316 (407)
Q Consensus 237 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 316 (407)
.+....+ +.|+||.++ +|+|+||+ +++ +++.+.+.......+.+.+++++.++.+.++-..
T Consensus 276 ~~~v~pD----i~t~sK~l~-~G~pig~v--~~~-----~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~------- 336 (451)
T PRK06918 276 HFDVVPD----LITVSKSLG-AGVPISGV--IGR-----KEIMDESAPGELGGTYAGSPLGCAAALAVLDIIE------- 336 (451)
T ss_pred hcCCCCC----EEeeehhhc-CCCccEEE--EEc-----HHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHH-------
Confidence 3321122 447999999 89999999 566 4455544433344556888888998777665221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc--CCCCCcccccCCceeEEecCC--------CHH---HHHHhHhhccEEEcCCC---
Q 015435 317 ELKAMADRIISMRQQLFDALSAR--GTPGDWSHIIKQIGMFTFTGL--------NSE---QVAFMTKEYHIYMTSDG--- 380 (407)
Q Consensus 317 ~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~--------~~~---~~~~~l~~~gi~~~~gg--- 380 (407)
-....++.+++.+++.+.|+++ +.+ .+..+.+.|+++.|.-. +.+ .+...+.++||.+.+++
T Consensus 337 -~~~~~~~~~~~g~~l~~~l~~l~~~~~-~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~~ 414 (451)
T PRK06918 337 -KENLNDRAIELGKVVMNRFEEMKNKYN-CIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTYG 414 (451)
T ss_pred -HCCHHHHHHHHHHHHHHHHHHHHhhCC-CceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCCC
Confidence 0122233444445555555443 111 12334556887776421 222 23344466899998863
Q ss_pred ---eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 381 ---RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 381 ---Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
||+++. ++++++++++++|.++++++
T Consensus 415 ~~lrl~p~l~~t~~~id~~l~~l~~~l~~~ 444 (451)
T PRK06918 415 NVIRVLMPLVITDEQLEEGLTIIEESLQAC 444 (451)
T ss_pred CEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 888754 68899999999999998753
No 184
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.90 E-value=1.6e-21 Score=187.07 Aligned_cols=340 Identities=10% Similarity=0.049 Sum_probs=205.0
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccC--CCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEY--LPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
..+++++||+..|....+.| ..++++++++.+++. ......+ .+.....++.+.+++...+. ..+.+++
T Consensus 29 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~a~~~ql~--~~~~~~~~~~~~~~~~~la~~l~~~~p~~-----~~~~v~f- 99 (420)
T TIGR00700 29 DVDGNRLIDFASGIAVLNIG-HSHPRVVDAVRTQVA--EFTHTCFMVTPYEGYVALAEKLNRIAPGS-----GPKKSVF- 99 (420)
T ss_pred eCCCCEEEECccCHHhccCC-CCCHHHHHHHHHHHH--hccCccccccCChHHHHHHHHHHHhCCCC-----CCCEEEE-
Confidence 34678999999997655667 667788888888886 2212212 12222345555555544111 1257999
Q ss_pred ecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhc-C--------c-----eeeEEEeecCCCC-----Cc--
Q 015435 105 QCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLA-G--------L-----SVKTYRYYDPATR-----GL-- 163 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~-G--------~-----~~~~v~~~~~~~~-----~~-- 163 (407)
+++|++|++.++++.+......+|+...-+|++........ | . .+..++..+.... ..
T Consensus 100 -~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (420)
T TIGR00700 100 -FNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLST 178 (420)
T ss_pred -eCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhH
Confidence 99999999999988877765567888888888775543321 1 1 1122222110000 00
Q ss_pred --ChhhHHHHHH--cC-CCCcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHH
Q 015435 164 --NFQGLLEDLR--AA-PSGAIVLLHACAHNPTGVDP-TLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRM 237 (407)
Q Consensus 164 --d~~~l~~~i~--~~-~~~~~v~i~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~ 237 (407)
+++.+++.+. .. ++..++++ -.-+.-+|..+ +.+.+++|.++|++||+++|+||+|.+|.+.+ ..++...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~iAavi~-Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g---~~~a~~~ 254 (420)
T TIGR00700 179 DGELAAARAIFVIDVGANNVAALVI-EPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTG---AMFACEH 254 (420)
T ss_pred HHHHHHHHHHHHhhcCCCcEEEEEE-CCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccc---hhHHHhh
Confidence 2456666653 12 33455555 44455567765 55569999999999999999999999998764 2333322
Q ss_pred HHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHH
Q 015435 238 FVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLE 317 (407)
Q Consensus 238 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 317 (407)
+.. ..+ +.++||.++ +|+|+||+ +++ +++.+.+.......+.+.++++|.++.+.++-..
T Consensus 255 ~~~-~pD---i~~lsK~l~-~G~pig~v--~~~-----~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~-------- 314 (420)
T TIGR00700 255 EGP-EPD---LITTAKSLA-DGLPLSGV--TGR-----AEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIE-------- 314 (420)
T ss_pred cCC-CCC---EEEeecccc-CCcceEEE--Eec-----HHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHH--------
Confidence 211 122 345999999 89999999 566 4455544433334556788888988877664211
Q ss_pred HHHHHHHHHHHHHHHHHHHHh----cCCCCCcccccCCceeEEecCC--------CHHH---HHHhHhhccEEEcCCC--
Q 015435 318 LKAMADRIISMRQQLFDALSA----RGTPGDWSHIIKQIGMFTFTGL--------NSEQ---VAFMTKEYHIYMTSDG-- 380 (407)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~l~~----~~~~~~~~~~~~~~~~~~~~~~--------~~~~---~~~~l~~~gi~~~~gg-- 380 (407)
-+...++.++..+++.+.|++ .+. +..+.+.|. +.++.+ +.+. +...+.++||.+.|++
T Consensus 315 ~~~~~~~~~~~g~~l~~~L~~l~~~~~~---~~~vrg~G~-~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f 390 (420)
T TIGR00700 315 SEGLIERARQIGRLVTDRLTTLKAVDPR---IGDVRGLGA-MIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMF 390 (420)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHhhCCC---EEEeeccce-EEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCC
Confidence 011222333333334444433 221 333445544 444422 1222 3333456899999863
Q ss_pred ----eEEecC-CCCCChhHHHHHHHHHHH
Q 015435 381 ----RISMAG-LSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 381 ----Ris~~~-~~~e~i~~~~~~l~~~l~ 404 (407)
||+++. .+++++++++++|.++++
T Consensus 391 ~~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 391 GNIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred CCEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 787653 588999999999999875
No 185
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.90 E-value=9.6e-22 Score=184.90 Aligned_cols=316 Identities=18% Similarity=0.173 Sum_probs=193.4
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcc
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGT 110 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t 110 (407)
+.+||.+.-. .+.|...+++.+.+++.... + + |. +.+++++++.+++....+. +++++ |+|+|
T Consensus 8 ~~~ina~g~~--t~~g~s~~~~~v~~a~~~~~-~--~---~~---~~~~~~~~~~~~~a~~~g~----~~~~~--~~g~t 70 (363)
T TIGR01437 8 KKVINASGKM--TILGVSTVSDEVADAQKRGA-Q--N---YF---EIKELVNKTGEYIANLLGV----EDAVI--VSSAS 70 (363)
T ss_pred ceEEECCcEe--ecCCCCCCCHHHHHHHHHHH-h--c---CC---CHHHHHHHHHHHHHHhhCC----CeEEE--EcCHH
Confidence 4566655332 24555555555544444433 1 1 32 2345555555544222221 57888 99999
Q ss_pred cHHHHHHHHHHhhcCCC---------------eEEecCCCCCCh----HHHHhhcCceeeEEEeecCCCCCcChhhHHHH
Q 015435 111 GSLRVGAEFLARHYHQL---------------TIYIPQPTWGNH----PKVFTLAGLSVKTYRYYDPATRGLNFQGLLED 171 (407)
Q Consensus 111 ~a~~~~~~~~~~~~~gd---------------~Vi~~~p~y~~~----~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~ 171 (407)
+++.+++ ...+.+|| +|+++.|.|..| ...+...|++++.++. .+.+|+++++++
T Consensus 71 ~al~~al--~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~----~~~~d~~~le~a 144 (363)
T TIGR01437 71 AGIAQSV--AAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY----ANECSAEQLEAA 144 (363)
T ss_pred HHHHHHH--HHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC----CCCCCHHHHHHh
Confidence 9999995 44577887 999999888766 4677789999999976 245999999999
Q ss_pred HHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEec
Q 015435 172 LRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSY 251 (407)
Q Consensus 172 i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 251 (407)
+. +++++++++++|+||+|.+.+ +++|+++|++||+++|+|++|.. +... .... +..++++|+
T Consensus 145 i~--~~t~ai~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~--------~~~~---~~~~-g~D~~~~S~ 207 (363)
T TIGR01437 145 IT--EKTAAILYIKSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEE--------DLQK---YYRL-GADLVIYSG 207 (363)
T ss_pred cC--hhceEEEEEecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCC--------chHH---HHHc-CCCEEEEeC
Confidence 98 667776655888999999876 56778889999999999999851 1111 1122 236777999
Q ss_pred CccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcc-cCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHH
Q 015435 252 AKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPM-YSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQ 330 (407)
Q Consensus 252 sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (407)
+|.+ +|++.|++ +.+ ++..+.+........+.. ....+..++.++...+.+. ..+..+.+.++++
T Consensus 208 ~K~l--~gp~~G~l--~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~---------~~~~~~~~~~~~~ 273 (363)
T TIGR01437 208 AKAI--EGPTSGLV--LGK-KKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLST---------GKESGAEMVAKLT 273 (363)
T ss_pred Cccc--CCCceEEE--EEc-HHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHcc---------CcccHHHHHHHHH
Confidence 9976 57888988 454 433333211101100000 0011223333333333221 1223334445677
Q ss_pred HHHHHHHhcCCCCCccccc--CCcee------EEec----CCCHHHHHHhHhhcc--EEEcC----CC--eEEecCCCCC
Q 015435 331 QLFDALSARGTPGDWSHII--KQIGM------FTFT----GLNSEQVAFMTKEYH--IYMTS----DG--RISMAGLSSK 390 (407)
Q Consensus 331 ~l~~~l~~~~~~~~~~~~~--~~~~~------~~~~----~~~~~~~~~~l~~~g--i~~~~----gg--Ris~~~~~~e 390 (407)
++.+.|.+++. +.... +..+. +.+. +++.+.+.+.|.+++ |..++ .| |+++...+++
T Consensus 274 ~l~~~L~~i~g---~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~~~~~~ 350 (363)
T TIGR01437 274 PFIEALNTLKG---VSASIVQDEAGRDIARAEIRFDESELGMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPRSVTGG 350 (363)
T ss_pred HHHHHHhcCCC---eEEEEecCCCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEeecCCHH
Confidence 88999988742 44331 11111 1121 457777777777666 77764 23 7777667889
Q ss_pred ChhHHHHHHHHHH
Q 015435 391 TVPHLTDAIHAAV 403 (407)
Q Consensus 391 ~i~~~~~~l~~~l 403 (407)
|++.++++|++++
T Consensus 351 e~~~~~~~l~~~~ 363 (363)
T TIGR01437 351 QLDIIVERIREIV 363 (363)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998753
No 186
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.90 E-value=1.4e-21 Score=187.11 Aligned_cols=334 Identities=12% Similarity=0.086 Sum_probs=210.7
Q ss_pred cCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 28 DTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 28 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
..+.++|||..|....+.| ...+++++++.+++. ...............++.+.+++++ +. +.+++ ++
T Consensus 34 ~~g~~~lD~~s~~~~~~~G-h~~p~v~~a~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~-~~-------~~~~~--~~ 101 (401)
T TIGR01885 34 VEGKRYLDFLSAYSAVNQG-HCHPKIVKALTEQAQ-KLTLSSRAFYNDVFGEFAEYVTKLF-GY-------DKVLP--MN 101 (401)
T ss_pred CCCCEEEEcccCHhhccCC-CCCHHHHHHHHHHHH-hccccccccCCHHHHHHHHHHHhhc-CC-------CEEEE--eC
Confidence 4568999999885433445 456777777777765 1111111112334566777777765 32 68899 99
Q ss_pred CcccHHHHHHHHHHhh-------cCC-CeEEecCCCCCCh-HHHHhhcCc------------eeeEEEeecCCCCCcChh
Q 015435 108 SGTGSLRVGAEFLARH-------YHQ-LTIYIPQPTWGNH-PKVFTLAGL------------SVKTYRYYDPATRGLNFQ 166 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~-------~~g-d~Vi~~~p~y~~~-~~~~~~~G~------------~~~~v~~~~~~~~~~d~~ 166 (407)
+|++|++.+++++... ..| +.|+...-+|.+. ...+...|- +++.++. .|++
T Consensus 102 SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~ 174 (401)
T TIGR01885 102 TGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLE 174 (401)
T ss_pred ccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHH
Confidence 9999999998776543 133 4566677777654 333333221 1222222 2688
Q ss_pred hHHHHHHcCCCCcEEEEecCCCCCCCCCCC-HHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcE
Q 015435 167 GLLEDLRAAPSGAIVLLHACAHNPTGVDPT-LEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245 (407)
Q Consensus 167 ~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (407)
++++.+.+.+.....+++...++++|...+ .+.+++|.++|++||+++|+||+|.++++.+ ..+.... .....++
T Consensus 175 ~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G---~~~~~~~-~~~~~di 250 (401)
T TIGR01885 175 ALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTG---KLLCVDH-ENVKPDI 250 (401)
T ss_pred HHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hhhHHhh-cCCCCCE
Confidence 898888643333333444778999999886 4479999999999999999999998877654 2222211 1112233
Q ss_pred EEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHH
Q 015435 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRI 325 (407)
Q Consensus 246 i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 325 (407)
+ ++||.++..|+|+|++ +++ ++ +.+.+.......+.+.+++.+.++.+.|+... + +.+.++.
T Consensus 251 ~---~~gK~l~~g~~~ig~v--~~~-~~----i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~------~--~~l~~~~ 312 (401)
T TIGR01885 251 V---LLGKALSGGVYPVSAV--LAD-DD----VMLTIKPGEHGSTYGGNPLACAVAVAALEVLE------E--EKLAENA 312 (401)
T ss_pred E---EeeccccCCCCCcEEE--EEc-HH----HHhhccCCCCCCCCCCCHHHHHHHHHHHHHHH------h--ccHHHHH
Confidence 3 3679998766999999 455 43 44444332222344667788888887776332 1 1344677
Q ss_pred HHHHHHHHHHHHhcCCCCCcccccCCceeEEe-cCCC-----HHHHHHhHhhccEEEcCCC----eEEec-CCCCCChhH
Q 015435 326 ISMRQQLFDALSARGTPGDWSHIIKQIGMFTF-TGLN-----SEQVAFMTKEYHIYMTSDG----RISMA-GLSSKTVPH 394 (407)
Q Consensus 326 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~l~~~gi~~~~gg----Ris~~-~~~~e~i~~ 394 (407)
+++.+++.+.|++++.+ .+....+.|.++.+ ++.+ ...+...|.++||.+.|.+ ||+.. .++++++++
T Consensus 313 ~~~~~~~~~~L~~l~~~-~~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~~~~~~lRi~p~l~~t~~~i~~ 391 (401)
T TIGR01885 313 EKLGEIFRDQLKKLPKP-IITEVRGRGLLNAIVIDESKTGRTAWDLCLKLKEKGLLAKPTHGNIIRLAPPLVITEEQLDE 391 (401)
T ss_pred HHHHHHHHHHHHhccCC-ceeEEeecCeeEEEEeccCcchhHHHHHHHHHHhCCEEEEecCCCEEEEeCCccCCHHHHHH
Confidence 77889999999887521 12223455666553 3322 2334455566899998865 77764 258899999
Q ss_pred HHHHHHHHH
Q 015435 395 LTDAIHAAV 403 (407)
Q Consensus 395 ~~~~l~~~l 403 (407)
++++|++++
T Consensus 392 ~l~~l~~~l 400 (401)
T TIGR01885 392 GLEIIKKVI 400 (401)
T ss_pred HHHHHHHHh
Confidence 999999876
No 187
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.90 E-value=7.1e-22 Score=189.75 Aligned_cols=344 Identities=13% Similarity=0.104 Sum_probs=211.3
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccc--cCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVK--EYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
..+++.+||+..|....+.| ..++.+++++.+++. ..... .|.......++.+.+++.. .. ..+.+++
T Consensus 37 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~ql~--~~~~~~~~~~~~~~~~~la~~L~~~~-p~-----~~~~v~f- 106 (443)
T PRK08360 37 DIEGNEYIDFLSDAAVQNVG-HNNPRVVKAIKEQTD--KLIHYTPIYGFPVEPLLLAEKLIEIA-PG-----DNPKVSF- 106 (443)
T ss_pred ECCCCEEEEccccHhhcccC-CCCHHHHHHHHHHHH--hccCccccccCcHHHHHHHHHHHHhC-CC-----CCCEEEE-
Confidence 45678999999997655677 667788888888886 21111 1211222344555555544 21 1157999
Q ss_pred ecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHH-hhcCc------------eeeEEEeecCCC--CC-------
Q 015435 105 QCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVF-TLAGL------------SVKTYRYYDPAT--RG------- 162 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~-~~~G~------------~~~~v~~~~~~~--~~------- 162 (407)
+++|++|++.++++.+.......|+...-+|++..... ...|. .+..+|..+... +.
T Consensus 107 -~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (443)
T PRK08360 107 -GLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCK 185 (443)
T ss_pred -cCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhH
Confidence 99999999999988877655567888888887764322 21121 123333311100 00
Q ss_pred -cChhhHHHHHHc---CCCCcEEEEecCCCCCCCCCCC-HHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHH
Q 015435 163 -LNFQGLLEDLRA---APSGAIVLLHACAHNPTGVDPT-LEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRM 237 (407)
Q Consensus 163 -~d~~~l~~~i~~---~~~~~~v~i~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~ 237 (407)
-+++.+++.+.. ..+.+++++ ...+||||.+++ .+.+++|.++|++||+++|+||+|.++++.+ ..+....
T Consensus 186 ~~~~~~~~~~l~~~~~~~~iAAvi~-eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G---~~~a~~~ 261 (443)
T PRK08360 186 MECVEYIKEKFEGEVYAEGVAALFA-EPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTG---KWFAIEH 261 (443)
T ss_pred HHHHHHHHHHHHhccCCCCeEEEEE-CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---cchhhhh
Confidence 123455666653 134556555 446799999877 5579999999999999999999999987754 2222222
Q ss_pred HHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHH
Q 015435 238 FVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLE 317 (407)
Q Consensus 238 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 317 (407)
+ ....+++ ++||.++ +|+|+||+ +++ +++.+.+.......+.+.+++++.++.+.++... +
T Consensus 262 ~-~~~pDii---tlsK~l~-~G~pigav--~~~-----~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~------~- 322 (443)
T PRK08360 262 F-GVEPDII---TLGKPLG-GGLPISAT--IGR-----AEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIE------E- 322 (443)
T ss_pred c-CCCCCEE---Eeccccc-CCceeEEE--EEc-----HHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHH------H-
Confidence 2 2223333 6799999 89999999 565 3444444333333455677888888888776431 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc--CCCCCcccccCCceeEEe--c-CC-----C---HHHHHHhHhhccEEEcCC-C---
Q 015435 318 LKAMADRIISMRQQLFDALSAR--GTPGDWSHIIKQIGMFTF--T-GL-----N---SEQVAFMTKEYHIYMTSD-G--- 380 (407)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~--~-~~-----~---~~~~~~~l~~~gi~~~~g-g--- 380 (407)
+.+.++++++.+++.+.|+++ ..+ .+..+...|.++.. . +- + ...+...+.++|+.+.+. +
T Consensus 323 -~~l~~~~~~~g~~l~~~L~~l~~~~~-~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~l 400 (443)
T PRK08360 323 -KNLLKRAEKLGNYTKKRLEEMKKKHE-LIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFFSGNVL 400 (443)
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHHhCC-CeeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeecCCCEE
Confidence 134566666777777766654 111 12223344444432 1 10 1 123444456689998764 3
Q ss_pred eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 381 RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 381 Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
|++... +++++++++++++.++++.+
T Consensus 401 r~~P~l~~t~~~id~~~~~l~~~l~~~ 427 (443)
T PRK08360 401 RIQPPLTIEKEVLDEGLDILEEAIEDV 427 (443)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 775443 58899999999999998754
No 188
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.90 E-value=1.7e-21 Score=185.03 Aligned_cols=279 Identities=17% Similarity=0.185 Sum_probs=184.5
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHH----hhcCc
Q 015435 73 PIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVF----TLAGL 148 (407)
Q Consensus 73 ~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~----~~~G~ 148 (407)
+......+++++++++ +. +...+ +++|+.++..+ +...+.+||+|+++.+.|..+...+ ...|+
T Consensus 63 ~~p~~~~Le~~lA~l~-G~-------~~~~~--~~sG~~Ai~~~--l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 130 (398)
T PRK07504 63 SNPTVDMFEKRMCALE-GA-------EDARA--TASGMAAVTAA--ILCQVKAGDHVVAARALFGSCRYVVETLLPRYGI 130 (398)
T ss_pred CCchHHHHHHHHHHHh-CC-------CeeeE--ecCHHHHHHHH--HHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCe
Confidence 4456789999999987 53 44556 78889999776 3455789999999999999765544 35688
Q ss_pred eeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCC
Q 015435 149 SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSL 228 (407)
Q Consensus 149 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~ 228 (407)
+++.++ .+|++++++++. +++++|++ ++|+||||.+.+ +++|+++|+++|+++|+|++|+......
T Consensus 131 ~v~~vd-------~~d~e~l~~ai~--~~tklV~l-esp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~~- 196 (398)
T PRK07504 131 ESTLVD-------GLDLDNWEKAVR--PNTKVFFL-ESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQK- 196 (398)
T ss_pred EEEEEC-------CCCHHHHHHhcC--cCceEEEE-ECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccCC-
Confidence 887773 268999999887 67788777 999999999886 7788888999999999999987554321
Q ss_pred CchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcCh
Q 015435 229 DADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDS 308 (407)
Q Consensus 229 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 308 (407)
+. . ....+++.|+||.++.+|+++|++ ++.+++...+ .+...........+...+..+...++.
T Consensus 197 -----~~----~-~gaDivv~S~sK~l~g~g~~~GG~--vv~~~~~i~~---~~~~~~~~~g~~~s~~~A~~~l~~L~t- 260 (398)
T PRK07504 197 -----PL----E-LGAHIVVYSATKHIDGQGRCLGGV--VLSDKAWIEE---HLQDYFRHTGPSLSPFNAWTLLKGLET- 260 (398)
T ss_pred -----ch----h-hCCCEEEeeccccccCCccceEEE--EEeCcHHHHH---HHHHHHHHhCCCCCHHHHHHHHhccch-
Confidence 11 1 134678999999999899999765 3444432221 222222222234444444444433332
Q ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CCCccc---------ccCCceeEEec-CCCHHHHHHhHhhc
Q 015435 309 TMYKEWTLELKAMADRIISMRQQLFDALSARGT------PGDWSH---------IIKQIGMFTFT-GLNSEQVAFMTKEY 372 (407)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~l~~~ 372 (407)
+....++..++...+.+.|++.+. |..-.. ...-||++.|. .-+.+.+.++++..
T Consensus 261 ---------l~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~~~~~l 331 (398)
T PRK07504 261 ---------LPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFRFLNAL 331 (398)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHHHHHhC
Confidence 445555666788888888886542 110000 11236666654 22345555555554
Q ss_pred cEEEc---CC-------------------------C------eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 373 HIYMT---SD-------------------------G------RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 373 gi~~~---~g-------------------------g------Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
.+.-. =| | |||++- |+.+.+++.|.++|+.
T Consensus 332 ~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~ 395 (398)
T PRK07504 332 KIVRISNNLGDAKSLITHPATTTHKNLSPEARAELGISEGFLRLSAGL---EDTDDLIEDLAAALKK 395 (398)
T ss_pred CcceecccCCCCCeeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHh
Confidence 44221 11 1 888873 7899999999998875
No 189
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.90 E-value=4.5e-22 Score=189.18 Aligned_cols=295 Identities=12% Similarity=0.123 Sum_probs=189.2
Q ss_pred cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhh----cCCCeEEecCCCCCChHHHHhhcCceeeE
Q 015435 77 LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARH----YHQLTIYIPQPTWGNHPKVFTLAGLSVKT 152 (407)
Q Consensus 77 ~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~----~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~ 152 (407)
..++++.+++++ +. +++++++ ++|+++++..++..+..+ .+||+|++++++|..+...++..|++++.
T Consensus 61 ~~~~~~~la~~~-g~-----~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~ 132 (373)
T TIGR03812 61 EEEVVGSLGNLL-HL-----PDAYGYI--VSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRY 132 (373)
T ss_pred HHHHHHHHHHHh-CC-----CCCCeEE--eccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEE
Confidence 366777788777 43 2367888 999999987774333221 36789999999999999999999999999
Q ss_pred EEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCC--c
Q 015435 153 YRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLD--A 230 (407)
Q Consensus 153 v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~--~ 230 (407)
++.+ .++.+|++++++.+. +++..+++ .+|+||||++. ++++|+++|+++|+++++|++|..+...-.. .
T Consensus 133 v~~~--~~~~~d~~~l~~~l~--~~~~~vv~-~~~~~~tG~~~---~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~ 204 (373)
T TIGR03812 133 APLD--EDYTVDVKDVEDLID--DNTIGIVG-IAGTTELGQID---DIEELSKIALENGIYLHVDAAFGGFVIPFLKKGY 204 (373)
T ss_pred EeeC--CCCCcCHHHHHHHHh--hCcEEEEE-ECCCCCCCccC---CHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCC
Confidence 9983 457789999999987 44544454 34799999975 4778888899999999999998755321000 0
Q ss_pred hhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcc-----cCCCChhHHHHHHHHh
Q 015435 231 DAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPM-----YSSPPIHGASIVATIL 305 (407)
Q Consensus 231 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l 305 (407)
....+. + ....-..+..|.+| |++++.|+|++ +..++++.+.+.. ........ ..+.+...+.++...+
T Consensus 205 ~~~~~d-~-~~~~~d~~~~s~~K-~~~~~~~~G~~--~~~~~~~~~~l~~-~~~~~~~~~~~~~~gt~~~~~~~~~~~~l 278 (373)
T TIGR03812 205 NPPPFD-F-SLPGVQSITIDPHK-MGLSPIPAGGI--LFRSKSYLKYLSV-DAPYLTVKKQATITGTRSGASAAATYAVI 278 (373)
T ss_pred CCCCcc-c-cCCCCCEEEECccc-cCCCcCCceEE--EEeCHHHHhhhcc-cCcccCCCCCcceEeechhHHHHHHHHHH
Confidence 000000 0 00111234567778 66678888877 4555554443311 00000000 0122333344444444
Q ss_pred cChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCCHHHHHHhHhhccEEEcCCC-----
Q 015435 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDG----- 380 (407)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~gg----- 380 (407)
+... +...++.++++.++++++.+.|++++. ..+..+..++..+..-+.+.+.+.|.++||.+..+.
T Consensus 279 ~~l~-----~~g~~~~~~~~~~~~~~l~~~L~~~g~---~~~~~~~~~~v~~~~~~~~~v~~~L~~~gi~v~~~~~~~~i 350 (373)
T TIGR03812 279 KYLG-----REGYRKIVAECMENTRYLVEELKKIGF---EPVIEPVLNIVAFEVDDPEEVRKKLRDRGWYVSVTRCPKAL 350 (373)
T ss_pred HHhC-----HHHHHHHHHHHHHHHHHHHHHHHhCCC---eEEcCCCceEEEEEeCCHHHHHHHHHHCCceeccCCCCCEE
Confidence 4221 134677889999999999999998873 223344444444322234455555666899997752
Q ss_pred eEEecC-CCCCChhHHHHHHHH
Q 015435 381 RISMAG-LSSKTVPHLTDAIHA 401 (407)
Q Consensus 381 Ris~~~-~~~e~i~~~~~~l~~ 401 (407)
|++++. .+++|+++++++|++
T Consensus 351 Ris~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 351 RIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred EEEEECCCCHHHHHHHHHHHhh
Confidence 998764 478999999999875
No 190
>PRK06460 hypothetical protein; Provisional
Probab=99.90 E-value=2e-21 Score=183.28 Aligned_cols=277 Identities=16% Similarity=0.138 Sum_probs=176.6
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCC----ChHHHHhhcCce
Q 015435 74 IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWG----NHPKVFTLAGLS 149 (407)
Q Consensus 74 ~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~----~~~~~~~~~G~~ 149 (407)
.....++++++++++ +. +..++ ++||++++..++ ...+.+||+|+++.|.|. .+...++..|++
T Consensus 44 ~p~~~~L~~~lA~l~-g~-------~~~v~--~~sG~~ai~~~l--~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~ 111 (376)
T PRK06460 44 NPTVLELTKKIVELE-NA-------EMGVA--FSSGMGAISTTA--LALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVN 111 (376)
T ss_pred CccHHHHHHHHHHHh-CC-------CcEEE--eCCHHHHHHHHH--HHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcE
Confidence 557889999999998 43 22344 556678888873 445789999999987654 344567788999
Q ss_pred eeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCC
Q 015435 150 VKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLD 229 (407)
Q Consensus 150 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~ 229 (407)
++.++.. +.+.+++.+. ++++++++ ++|+||||.+++. ++|+++|+++|+++|+|++|......
T Consensus 112 v~~~~~~-------~~~~l~~~~~--~~tklV~l-~sp~NPtG~v~d~---~~I~~la~~~g~~vivDea~~~~~~~--- 175 (376)
T PRK06460 112 VDASNPG-------SDNIIEKAKS--KRYDVVFV-ENITNPLLRVVDI---TELSKVCKENGSILIVDATFSTPINQ--- 175 (376)
T ss_pred EEEECCC-------CHHHHHHhcC--CCceEEEE-ECCCCCCCcccCH---HHHHHHHHHcCCEEEEECCcCccccC---
Confidence 8887652 1233444333 45677777 9999999998875 46777899999999999998754211
Q ss_pred chhHHHHHHHHcCCcEEEEEecCcccccc-CCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcCh
Q 015435 230 ADAQSVRMFVADGGECLVAQSYAKNMGLY-GERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDS 308 (407)
Q Consensus 230 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 308 (407)
.+ + . .+..+++.|+||.++.. +.++||+ ++ +++ +.+.+......+..+.+... +..+++..
T Consensus 176 ---~~---l-~-~~~divv~S~sK~l~G~~~~~~G~~--~~-~~~----l~~~l~~~~~~~g~~~~~~~---a~~~l~~~ 237 (376)
T PRK06460 176 ---KP---L-E-LGADIVVHSASKFLAGHNDVIAGLA--AG-YGK----LLNVIDQMRRTLGTSLDPHA---AYLTLRGI 237 (376)
T ss_pred ---Ch---h-h-cCCCEEEeecceeccCCCCceEEEE--ec-CHH----HHHHHHHHHHhcCCCCCHHH---HHHHHhch
Confidence 11 1 1 23468999999998622 3578988 34 454 44444444444433444322 22223332
Q ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc---------------ccCCceeEEec-CCCHHHHHHhHhhc
Q 015435 309 TMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSH---------------IIKQIGMFTFT-GLNSEQVAFMTKEY 372 (407)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~---------------~~~~~~~~~~~-~~~~~~~~~~l~~~ 372 (407)
+.++.+.+++.++++.+.+.|++.+.-..+.+ ....||++.+. +-+.+.+..+++.-
T Consensus 238 -------~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~~~~~l 310 (376)
T PRK06460 238 -------KTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALKVMKSL 310 (376)
T ss_pred -------hhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHHHHHhC
Confidence 44667778899999999999987642000000 01246776654 22334455555543
Q ss_pred cEEE---cCC-------------------------C------eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 373 HIYM---TSD-------------------------G------RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 373 gi~~---~~g-------------------------g------Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
.+.. +=| | |+|++- |+.+.+++.|.++|+.+
T Consensus 311 ~~~~~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 311 KLIIPAQTLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVGI---EDVNDLIEDLDRALSTL 375 (376)
T ss_pred CcceeccCCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence 3211 101 1 888873 88999999999998764
No 191
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.90 E-value=3.6e-21 Score=182.54 Aligned_cols=278 Identities=16% Similarity=0.161 Sum_probs=186.6
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHH----HhhcCc
Q 015435 73 PIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKV----FTLAGL 148 (407)
Q Consensus 73 ~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~----~~~~G~ 148 (407)
+.....++++.++++. +. ++.++ ++||++|+.+++ ...+.+||+|+++.|+|.+.... +...|+
T Consensus 62 ~~p~~~~le~~lA~l~-g~-------~~~i~--~ssG~~Ai~~~l--~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi 129 (398)
T PRK08249 62 TNPTVQAFEEKVRILE-GA-------EAATA--FSTGMAAISNTL--YTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGV 129 (398)
T ss_pred CChHHHHHHHHHHHHh-CC-------CeEEE--eCChHHHHHHHH--HHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCe
Confidence 3455788999999988 53 45677 888899998884 44578999999999999876543 446788
Q ss_pred eeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCC
Q 015435 149 SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSL 228 (407)
Q Consensus 149 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~ 228 (407)
+++.++. .|+++++++++ ++++++++ ++|+||||.+.+ +++|+++|+++|+++|+|++|..+....
T Consensus 130 ~v~~vd~-------~d~e~l~~~i~--~~tklV~i-e~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~- 195 (398)
T PRK08249 130 DVTLCET-------GDHEQIEAEIA--KGCDLLYL-ETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQN- 195 (398)
T ss_pred EEEEcCC-------CCHHHHHHhcC--CCCeEEEE-ECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccCC-
Confidence 8776643 58899999987 56777777 899999999886 7778888999999999999998654321
Q ss_pred CchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcCh
Q 015435 229 DADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDS 308 (407)
Q Consensus 229 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 308 (407)
+. . ....++++|+||.++.+|.++|++ ++.++++.+++. ..........+...+..+...++
T Consensus 196 -----~l---~--~~~Divv~S~sK~l~g~~~~~gG~--vv~~~~l~~~l~----~~~~~~g~~~s~~~a~l~l~~l~-- 257 (398)
T PRK08249 196 -----PL---A--LGADLVIHSATKFLSGHADALGGV--VCGSKELMEQVY----HYREINGATMDPMSAYLILRGMK-- 257 (398)
T ss_pred -----ch---h--hCCCEEeccCceecCCCCCceEEE--EECCHHHHHHHH----HHHHhcCCCCCHHHHHHHHhCcc--
Confidence 11 1 123377899999998788887555 355565544443 33333333455555554443333
Q ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CCC-----ccc----ccCCceeEEec-CCCHHHHHHhHhhc
Q 015435 309 TMYKEWTLELKAMADRIISMRQQLFDALSARGT------PGD-----WSH----IIKQIGMFTFT-GLNSEQVAFMTKEY 372 (407)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~-----~~~----~~~~~~~~~~~-~~~~~~~~~~l~~~ 372 (407)
.+....++..++++.+.+.|++.+. |.. ... ...-||++.|. .-+.+.+.++++.-
T Consensus 258 --------tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~~~f~~~l 329 (398)
T PRK08249 258 --------TLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTVKRLLPKL 329 (398)
T ss_pred --------hHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHHHHHHHhC
Confidence 2445556677888888888887542 110 000 11246676653 32444455666554
Q ss_pred cEEE-cC--C-------------------------C------eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 373 HIYM-TS--D-------------------------G------RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 373 gi~~-~~--g-------------------------g------Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
.+.. .+ | | |||++- |+.+.+++-|.++|+.
T Consensus 330 ~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~ 393 (398)
T PRK08249 330 RYAHRAANLGAVETIYGPARTTSHVENTLEERAALGIPEGLVRISVGI---EDTEDLIADLEQAFAH 393 (398)
T ss_pred CcceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHH
Confidence 4431 11 1 1 888873 7888999999888864
No 192
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.90 E-value=5.1e-21 Score=181.47 Aligned_cols=276 Identities=16% Similarity=0.163 Sum_probs=183.4
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHH----HHhhcCce
Q 015435 74 IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPK----VFTLAGLS 149 (407)
Q Consensus 74 ~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~----~~~~~G~~ 149 (407)
.....++++.+++++ +. +++++ |+||++|+.+++ ...+.+||+|+++.+.|.+... .+...|++
T Consensus 60 ~p~~~~le~~la~l~-g~-------~~~v~--~ssG~~Ai~~al--~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~ 127 (390)
T PRK08133 60 NPTVTMFQERLAALE-GA-------EACVA--TASGMAAILAVV--MALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIE 127 (390)
T ss_pred ChHHHHHHHHHHHHh-CC-------CcEEE--ECCHHHHHHHHH--HHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcE
Confidence 334778899999987 43 56888 999999999884 4557899999999999987654 44578999
Q ss_pred eeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCC
Q 015435 150 VKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLD 229 (407)
Q Consensus 150 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~ 229 (407)
++.++. .|++++++.+. ++++++++ ++|+||||.+.+ +++|+++|+++|+++|+|++|.......
T Consensus 128 v~~vd~-------~d~~~l~~~i~--~~tklV~i-e~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~~-- 192 (390)
T PRK08133 128 TTFVDL-------TDLDAWRAAVR--PNTKLFFL-ETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQQ-- 192 (390)
T ss_pred EEEECC-------CCHHHHHHhcC--cCCeEEEE-ECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccCC--
Confidence 988866 27788998887 67788777 899999999874 7888888999999999999986444321
Q ss_pred chhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChh
Q 015435 230 ADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDST 309 (407)
Q Consensus 230 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 309 (407)
++ .. ...++++|+||.++.+|.++|++ ++.+++..+++.. ..+......+...+..+ ++..
T Consensus 193 ----pl----~~-g~Divv~S~sK~~~g~g~~~GG~--vv~~~~~~~~~~~----~~~~~g~~~~~~~a~~~---l~gl- 253 (390)
T PRK08133 193 ----PL----KL-GADVVIHSATKYLDGQGRVLGGA--VVGSKELMEEVFG----FLRTAGPTLSPFNAWVF---LKGL- 253 (390)
T ss_pred ----ch----hh-CCcEEEeecceeecCCcceEeEE--EEcCHHHHHHHHH----HHHHhCCCCCHHHHHHH---Hccc-
Confidence 11 11 23578999999999899998665 3444544333332 22222223344333333 3322
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CCC-----ccc----ccCCceeEEec-CCCHHHHHHhHhhcc
Q 015435 310 MYKEWTLELKAMADRIISMRQQLFDALSARGT------PGD-----WSH----IIKQIGMFTFT-GLNSEQVAFMTKEYH 373 (407)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~-----~~~----~~~~~~~~~~~-~~~~~~~~~~l~~~g 373 (407)
+.+..+.+++.++...+.+.|++.+. |.. +.. ....||++.+. .-+.+.+.++++...
T Consensus 254 ------~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~~l~ 327 (390)
T PRK08133 254 ------ETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGREAAWRVIDATR 327 (390)
T ss_pred ------chHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCHHHHHHHHHhCC
Confidence 23455556667788889999887632 110 000 11235666554 213444555555544
Q ss_pred EEE---cCC-------------------------C------eEEecCCCCCChhHHHHHHHHHHH
Q 015435 374 IYM---TSD-------------------------G------RISMAGLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 374 i~~---~~g-------------------------g------Ris~~~~~~e~i~~~~~~l~~~l~ 404 (407)
+.. .=| | |||++- |+.+.+++-|+++|+
T Consensus 328 l~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~ 389 (390)
T PRK08133 328 LISITANLGDTKTTITHPATTTHGRLSPEARAAAGITEGLIRVAVGL---EDVADIKADLARGLA 389 (390)
T ss_pred cceEeccCCCcceeeecCCCCCcccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHhh
Confidence 432 101 1 888773 889999999999875
No 193
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.90 E-value=4.9e-21 Score=175.30 Aligned_cols=319 Identities=17% Similarity=0.180 Sum_probs=218.9
Q ss_pred cccchhHHHHHHHHhccccccccCCCCC--CcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcC
Q 015435 48 PLVLNVVRKAEQLLVNDQSRVKEYLPIV--GLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~--g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~ 125 (407)
|.|.++-.++..++. ....++++|.. -+.++++.+...+ +..+ .+-+++ +.+||.+++++ +.+.+.+
T Consensus 11 PGP~~v~~~V~~am~--~~~~~h~s~~F~~~~~~~~~~L~~v~-~t~~----~~~~ll--~gsGt~amEAa--v~sl~~p 79 (383)
T COG0075 11 PGPVPVPPRVLLAMA--RPMVGHRSPDFVGIMKEVLEKLRKVF-GTEN----GDVVLL--SGSGTLAMEAA--VASLVEP 79 (383)
T ss_pred CCCCCCCHHHHHHhc--CCCCCCCCHHHHHHHHHHHHHHHHHh-cCCC----CcEEEE--cCCcHHHHHHH--HHhccCC
Confidence 567777777777776 33334455522 2455555566555 4321 133444 88999999999 5777889
Q ss_pred CCeEEecCCCCC--ChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHH
Q 015435 126 QLTIYIPQPTWG--NHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQI 203 (407)
Q Consensus 126 gd~Vi~~~p~y~--~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i 203 (407)
||+|++...+.+ .+.++++.+|.+++.+.. +++..+|++++++.+++.+..+.+.+ .++.++||+ .+++++|
T Consensus 80 gdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~--~wg~~v~p~~v~~~L~~~~~~~~V~~-vH~ETSTGv---lnpl~~I 153 (383)
T COG0075 80 GDKVLVVVNGKFGERFAEIAERYGAEVVVLEV--EWGEAVDPEEVEEALDKDPDIKAVAV-VHNETSTGV---LNPLKEI 153 (383)
T ss_pred CCeEEEEeCChHHHHHHHHHHHhCCceEEEeC--CCCCCCCHHHHHHHHhcCCCccEEEE-EeccCcccc---cCcHHHH
Confidence 999999987654 457789999999999988 68889999999999997666777777 566888999 4579999
Q ss_pred HHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccc-cCCCcceeEEeecChhhHHHHHHH-
Q 015435 204 RQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGL-YGERVGALSIVCKTEDVASRVESQ- 281 (407)
Q Consensus 204 ~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~v~~~~~~~~~~~~~- 281 (407)
+++|++||.++|+|.+- .++..+.+.+. ..-.+++.+--|.++. || +|.+ +-+++..+++...
T Consensus 154 ~~~~k~~g~l~iVDaVs-S~Gg~~~~vd~---------wgiDv~itgSQK~l~~PPG--la~v---~~S~~a~e~~~~~~ 218 (383)
T COG0075 154 AKAAKEHGALLIVDAVS-SLGGEPLKVDE---------WGIDVAITGSQKALGAPPG--LAFV---AVSERALEAIEERK 218 (383)
T ss_pred HHHHHHcCCEEEEEecc-cCCCcccchhh---------cCccEEEecCchhccCCCc--ccee---EECHHHHHHHhcCC
Confidence 99999999999999974 34433232222 2334666666888874 55 4555 3344443433221
Q ss_pred -----------Hhhhh--hcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc
Q 015435 282 -----------LKLVI--RPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHI 348 (407)
Q Consensus 282 -----------~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 348 (407)
..... ..+..+++.....++..+++... .+.+++..++++++.+.+++.++.+|. +..
T Consensus 219 ~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~-----~EGle~r~~RH~~~~~a~r~~~~alGl----~~~ 289 (383)
T COG0075 219 HPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLIL-----EEGLEARIARHRRLAEALRAGLEALGL----ELF 289 (383)
T ss_pred CCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHH-----HhhHHHHHHHHHHHHHHHHHHHHHcCC----ccc
Confidence 11111 23444677777777777776432 356889999999999999999999994 433
Q ss_pred c------CCc-eeEEecCCCHHH-HHHhHhhccEEEcCCC--------eEEe-cCCCCCChhHHHHHHHHHHHhhC
Q 015435 349 I------KQI-GMFTFTGLNSEQ-VAFMTKEYHIYMTSDG--------RISM-AGLSSKTVPHLTDAIHAAVTRMG 407 (407)
Q Consensus 349 ~------~~~-~~~~~~~~~~~~-~~~~l~~~gi~~~~gg--------Ris~-~~~~~e~i~~~~~~l~~~l~~~~ 407 (407)
. |.. .++.-.+.+.+. ...+++++|+.+.+|- ||+. +.++.+++..++.+|..+++++|
T Consensus 290 ~~~~~~s~tvta~~~P~g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g 365 (383)
T COG0075 290 ADPERRSPTVTAIKVPEGVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELG 365 (383)
T ss_pred cCcccCCCceEEEECCCCCCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcC
Confidence 2 111 111111445444 3468888899999872 9964 44788999999999999998875
No 194
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.89 E-value=3.9e-21 Score=182.33 Aligned_cols=275 Identities=15% Similarity=0.141 Sum_probs=179.8
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHh----hcCc
Q 015435 73 PIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFT----LAGL 148 (407)
Q Consensus 73 ~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~----~~G~ 148 (407)
+.....+|++.+++++ +. ++.++ ++||+.++..+ +...+.+||+|+++.|.|......+. ..|+
T Consensus 59 ~~pt~~~Le~~lA~l~-G~-------~~al~--~~sG~~Ai~~~--l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi 126 (386)
T PRK06767 59 GNPTVKLFEERMAVLE-GG-------EEALA--FGSGMAAISAT--LIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMI 126 (386)
T ss_pred CCcchHHHHHHHHHHh-CC-------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCe
Confidence 4556789999999988 53 45666 77778888877 34557899999999999887665544 3455
Q ss_pred eeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCC
Q 015435 149 SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSL 228 (407)
Q Consensus 149 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~ 228 (407)
++..++. .|++++++++. ++++++++ ++|+||||.+.+ +++|+++|+++|+++|+|++|...... .
T Consensus 127 ~~~~~~~-------~d~~~l~~~i~--~~tklV~l-esp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~-~ 192 (386)
T PRK06767 127 THSFCDM-------ETEADIENKIR--PNTKLIFV-ETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQ-R 192 (386)
T ss_pred EEEEeCC-------CCHHHHHHhhC--cCceEEEE-eCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccC-C
Confidence 5444422 47889999887 56778777 899999999876 678888899999999999998643322 1
Q ss_pred CchhHHHHHHHHcCCcEEEEEecCccccccCCCc-ceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcC
Q 015435 229 DADAQSVRMFVADGGECLVAQSYAKNMGLYGERV-GALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKD 307 (407)
Q Consensus 229 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 307 (407)
++ . ....+++.|+||.++.+|.++ |++ +++ ++..+++...... ......+...+.++...++.
T Consensus 193 -----pl----~-~g~Div~~S~sK~l~g~g~~~gG~v--~~~-~~~i~~~~~~~~~---~~g~~~~~~~a~l~~~~L~t 256 (386)
T PRK06767 193 -----PL----E-LGCDAVVHSATKYIGGHGDVVAGVT--ICK-TRALAEKIRPMRK---DIGGIMAPFDAWLLLRGLKT 256 (386)
T ss_pred -----ch----h-cCCcEEEecCcceecCCCCceeEEE--EeC-hHHHHHHHHHHHH---HhCCCCCHHHHHHHHcCCCc
Confidence 11 1 123478889999999889986 666 454 4433333222221 12223344444444433332
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-c-----------ccCCceeEEec-CCCHHHH---HHhHhh
Q 015435 308 STMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWS-H-----------IIKQIGMFTFT-GLNSEQV---AFMTKE 371 (407)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~-----------~~~~~~~~~~~-~~~~~~~---~~~l~~ 371 (407)
+..+.++.+++.+.+.+.|++.+. +. + ....+|++.|. .-+.+.. ...|+.
T Consensus 257 ----------l~~r~~~~~~~a~~la~~L~~~p~---v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~ 323 (386)
T PRK06767 257 ----------LAVRMDRHCDNAEKIVSFLKNHDA---VEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHF 323 (386)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHcCCC---ccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCc
Confidence 334556778889999999988753 22 1 12346666654 2122223 233344
Q ss_pred ccEEEcCCC-------------------------------eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 372 YHIYMTSDG-------------------------------RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 372 ~gi~~~~gg-------------------------------Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
.++.++=|| |||++- |+.+.+++-|.++|+.
T Consensus 324 ~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl---E~~~dl~~dl~~al~~ 385 (386)
T PRK06767 324 ITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL---ESWEDIVSDLEQALKK 385 (386)
T ss_pred cEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 555443332 888773 8899999999998864
No 195
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.89 E-value=3.6e-21 Score=185.59 Aligned_cols=346 Identities=14% Similarity=0.092 Sum_probs=208.5
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccc-cCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVK-EYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
...++++||+..|....+.| ..++.+++++.+++. ...... .........++.+.+++...+. .+.+++
T Consensus 39 d~dG~~ylD~~~g~~~~~lG-h~~p~v~~a~~~q~~-~~~~~~~~~~~~~~~~~la~~L~~~~~~~------~~~v~f-- 108 (433)
T PRK08117 39 GVDGKEYLDFTSGIAVANVG-HRHPKVVQAIKEQAD-KLMHGPSGVIYYESILKLAEELAEITPGG------LDCFFF-- 108 (433)
T ss_pred eCCCCEEEECCcchhhccCC-CCCHHHHHHHHHHHH-hccCccccccCCHHHHHHHHHHHHhCCCC------CCEEEE--
Confidence 34578999999997655677 667788888888875 111111 1112233456666666655111 267899
Q ss_pred cCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHh-hcC-------------ceeeEEEeecCC--CCC-------
Q 015435 106 CLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFT-LAG-------------LSVKTYRYYDPA--TRG------- 162 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~-~~G-------------~~~~~v~~~~~~--~~~------- 162 (407)
++||++|++.++++.+.+....+|+..+-+|++...... ..+ ..+..+|..+.. ..+
T Consensus 109 ~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (433)
T PRK08117 109 SNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCF 188 (433)
T ss_pred eCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHH
Confidence 999999999998877666555678888888877654322 111 012223331110 000
Q ss_pred -cChhhHHHHHHc--C-CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHH
Q 015435 163 -LNFQGLLEDLRA--A-PSGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRM 237 (407)
Q Consensus 163 -~d~~~l~~~i~~--~-~~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~ 237 (407)
-+++++++.+.+ . .+..++++ -......|.+ .+++.+++|.++|++||+++|+||+|.+|+..+. .+....
T Consensus 189 ~~~~~~l~~~~~~~~~~~~~aavi~-Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~---~~~~~~ 264 (433)
T PRK08117 189 LECLRDLESLFKHQVTPEEVAAVII-EPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGE---WFAAQT 264 (433)
T ss_pred HHHHHHHHHHHHhccCCCcEEEEEE-CCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCcccc---chhHhh
Confidence 145666666653 1 23344444 3334444655 6899999999999999999999999998876542 222121
Q ss_pred HHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHH
Q 015435 238 FVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLE 317 (407)
Q Consensus 238 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 317 (407)
+ +...-+.++||.++ +|+++|++ +++ ++ +...+.......+.+.+++++.++.+.|+...
T Consensus 265 ~----gv~pDi~t~sK~lg-~G~pigav--~~~-~~----i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~-------- 324 (433)
T PRK08117 265 F----GVVPDIMTIAKGIA-SGLPLSAV--VAS-KE----LMEQWPLGSHGTTFGGNPVACAAALATLEVIK-------- 324 (433)
T ss_pred c----CCCCCEeehhhhcc-CCCcceeE--EEc-HH----HHhhccCCCCCCCCCcCHHHHHHHHHHHHHHH--------
Confidence 1 11122468999999 89999998 455 44 44433333333445778888888888876331
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCC-------C---HHHHHHhHhhccEEEcCCC------e
Q 015435 318 LKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL-------N---SEQVAFMTKEYHIYMTSDG------R 381 (407)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~~l~~~gi~~~~gg------R 381 (407)
.+.+.++++++.+++.+.|+++..........+..|++..+.+ + ...+.+.+.++||.+.+.| |
T Consensus 325 ~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~~~lR 404 (433)
T PRK08117 325 EEKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCGNAGNVLR 404 (433)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecCCCCCEEE
Confidence 1234455666666676666654211001111222233333222 1 2234455566899886632 7
Q ss_pred EEec-CCCCCChhHHHHHHHHHHHhh
Q 015435 382 ISMA-GLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 382 is~~-~~~~e~i~~~~~~l~~~l~~~ 406 (407)
+++. .++++++++++++|.++++++
T Consensus 405 l~p~~~~t~~~i~~~~~~l~~~l~~~ 430 (433)
T PRK08117 405 MIPPLTVTKEEIDEGLDILDEALTEY 430 (433)
T ss_pred EeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 7753 258999999999999998754
No 196
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.89 E-value=2.7e-21 Score=185.75 Aligned_cols=331 Identities=17% Similarity=0.130 Sum_probs=213.5
Q ss_pred cCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 28 DTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 28 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
.++++++|+..|.+..+.| ..++.+++++.+++. .. ...|.+..+..++++.+++...+ .+.+++ ++
T Consensus 47 ~dG~~~lD~~~g~~~~~lG-h~~p~i~~a~~~~~~--~~-~~~~~~~~~~~~la~~L~~~~~~-------~~~v~~--~~ 113 (426)
T PRK00062 47 VDGNEYIDYVGSWGPMILG-HAHPEVVEAVIEAAE--KG-LSFGAPTELEVELAELVIELVPS-------IEMVRM--VN 113 (426)
T ss_pred CCCCEEEEcccchhhhhcC-CCCHHHHHHHHHHHH--hC-CcCCCCCHHHHHHHHHHHHhCCC-------CCEEEE--ec
Confidence 4678999999997655567 567788888888886 22 33345566667777777776521 267999 99
Q ss_pred CcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhc-Cc------------eee-----EEEeecCCCCCcChhhHH
Q 015435 108 SGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLA-GL------------SVK-----TYRYYDPATRGLNFQGLL 169 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~-G~------------~~~-----~v~~~~~~~~~~d~~~l~ 169 (407)
||++|++.++++......+++|+..+++|+++...+... |. ..+ .+.. +. .|++.++
T Consensus 114 sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~d~~~l~ 188 (426)
T PRK00062 114 SGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTA--PY---NDLEAVE 188 (426)
T ss_pred CHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEc--CC---CCHHHHH
Confidence 999999999888766656789999999999986433221 10 000 0111 11 2788888
Q ss_pred HHHHcC-CCCcEEEEecCCCCCCCCCCC-HHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEE
Q 015435 170 EDLRAA-PSGAIVLLHACAHNPTGVDPT-LEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLV 247 (407)
Q Consensus 170 ~~i~~~-~~~~~v~i~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~ 247 (407)
+.+.+. .+..++++.+.++| +|.+.+ .+.+++|.++|++||+++|+||+|.++..++ ......+....|
T Consensus 189 ~~i~~~~~~~aaiivEpv~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~----~~~~~~~~~~pD---- 259 (426)
T PRK00062 189 ELFEEYGDEIAAVIVEPVAGN-MGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVAL----GGAQGYYGVTPD---- 259 (426)
T ss_pred HHHHhCCCcEEEEEEeCCcCC-CCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCC----ccHHHHhCCCcc----
Confidence 888632 24456666445555 787765 8889999999999999999999999884321 122222211112
Q ss_pred EEecCccccccCCCcceeEEeecChhhHHHHHHHHhh---hhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHH
Q 015435 248 AQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKL---VIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADR 324 (407)
Q Consensus 248 ~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (407)
+.++||.++ .|+++|++ +++ +++.+.+.. .....+.+.+++.+.++.+.|+... + +...++
T Consensus 260 i~~~gK~l~-~G~p~ga~--~~~-----~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~------~--~~~~~~ 323 (426)
T PRK00062 260 LTTLGKIIG-GGLPVGAF--GGR-----REIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLK------E--PGFYEE 323 (426)
T ss_pred hHhhhhHhh-CCCcceee--eEH-----HHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHh------c--chHHHH
Confidence 357899999 88999998 465 344444431 1122344677888888877776321 1 123344
Q ss_pred HHHHHHHHHHHHH----hcCCCCCccc-ccCCceeEEec-CC------------CH---HHHHHhHhhccEEEcCCC---
Q 015435 325 IISMRQQLFDALS----ARGTPGDWSH-IIKQIGMFTFT-GL------------NS---EQVAFMTKEYHIYMTSDG--- 380 (407)
Q Consensus 325 ~~~~~~~l~~~l~----~~~~~~~~~~-~~~~~~~~~~~-~~------------~~---~~~~~~l~~~gi~~~~gg--- 380 (407)
++++.+++.+.|+ +.+ +.. ..+.|.++.+. .- +. ..+...+.++||.+.+.+
T Consensus 324 ~~~~~~~~~~~l~~~~~~~~----~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~~~~ 399 (426)
T PRK00062 324 LEALTKRLAEGLKEAAKKAG----IPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPSQFEA 399 (426)
T ss_pred HHHHHHHHHHHHHHHHHHcC----CceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecCCcCc
Confidence 4445555555544 334 222 33456555432 10 11 234455556899998865
Q ss_pred -eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 381 -RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 381 -Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
++++. ++++++++++++++++++.+
T Consensus 400 ~~~~~~-~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 400 GFVSAA-HTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred eeeecc-CCHHHHHHHHHHHHHHHHhh
Confidence 67755 59999999999999998764
No 197
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.89 E-value=4.3e-21 Score=182.67 Aligned_cols=316 Identities=16% Similarity=0.151 Sum_probs=199.3
Q ss_pred cccchhHHHHHHHHhccccc--cccCCC----CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHH
Q 015435 48 PLVLNVVRKAEQLLVNDQSR--VKEYLP----IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLA 121 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~--~~~y~~----~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~ 121 (407)
|.|..+.+++.+.+...... ...|.. ..++.++++.+++++ +.. ..++|++ |+|+++++..++ ..
T Consensus 11 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~-~~~----~~~~v~~--~~g~t~al~~~~--~~ 81 (376)
T TIGR01977 11 PKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLF-NAP----SSAHVVF--TNNATTALNIAL--KG 81 (376)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHh-CcC----CCCeEEE--eCCHHHHHHHHH--Hh
Confidence 44556666666665411111 112322 245778999999988 431 1258999 999999999884 44
Q ss_pred hhcCCCeEEecCCCCCChHH----HHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCH
Q 015435 122 RHYHQLTIYIPQPTWGNHPK----VFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTL 197 (407)
Q Consensus 122 ~~~~gd~Vi~~~p~y~~~~~----~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~ 197 (407)
.+.+||+|+++.++|..+.. ..+..|.+++.++.+ .++.+|++++++.+. ++++++++ ++|+||||.+++
T Consensus 82 ~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~--~~~~~v~~-~~~~n~tG~~~~- 155 (376)
T TIGR01977 82 LLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCD--NEGLISPERIKRAIK--TNTKLIVV-SHASNVTGTILP- 155 (376)
T ss_pred ccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecC--CCCCcCHHHHHHhcC--CCCeEEEE-ECCCCCccccCC-
Confidence 57799999999999887654 334569999999883 346789999999986 55677666 899999999887
Q ss_pred HHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHH
Q 015435 198 EQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASR 277 (407)
Q Consensus 198 ~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~ 277 (407)
+++|.++|+++|+++|+|++++..... . + + ......+++.|.+|.++.|. .+|.+ +..+......
T Consensus 156 --~~~i~~l~~~~~~~livD~a~~~g~~~-~--~---~----~~~~~D~~~~s~~K~l~~p~-g~g~l--~~~~~~~~~~ 220 (376)
T TIGR01977 156 --IEEIGELAQENGIFFILDAAQTAGVIP-I--D---M----TELAIDMLAFTGHKGLLGPQ-GTGGL--YIREGIKLKP 220 (376)
T ss_pred --HHHHHHHHHHcCCEEEEEhhhccCccC-C--C---c----hhcCCCEEEecccccccCCC-CceEE--EEcCCcCcCc
Confidence 567788899999999999997533321 1 1 1 11234588889999876432 35666 3443321000
Q ss_pred HHHH---Hhh--------h-hhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 015435 278 VESQ---LKL--------V-IRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDW 345 (407)
Q Consensus 278 ~~~~---~~~--------~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 345 (407)
+... ... . .+....+++.....++..+++... +...+..+++.+++.+++.+.+++.+. +
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~-----~~g~~~~~~~~~~l~~~~~~~l~~~~~---~ 292 (376)
T TIGR01977 221 LKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIE-----KIGIANIAKKECMLTEKLLNGLREINK---V 292 (376)
T ss_pred eecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHH-----HhCHHHHHHHHHHHHHHHHHHHhcCCC---e
Confidence 0000 000 0 001112344444444444443110 123567778888999999999987642 4
Q ss_pred ccccC-----CceeEEe--cCCCHHHHHHhHhhc-cEEEcCC----------------C--eEEecC-CCCCChhHHHHH
Q 015435 346 SHIIK-----QIGMFTF--TGLNSEQVAFMTKEY-HIYMTSD----------------G--RISMAG-LSSKTVPHLTDA 398 (407)
Q Consensus 346 ~~~~~-----~~~~~~~--~~~~~~~~~~~l~~~-gi~~~~g----------------g--Ris~~~-~~~e~i~~~~~~ 398 (407)
....+ .++...+ .+.+.+.+...|.+. ||.+.+| + |+++.. .+++|+++++++
T Consensus 293 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~ 372 (376)
T TIGR01977 293 KIYGPADPANRVGVVSFTVEGIDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEA 372 (376)
T ss_pred EEeCCCCccccCCeEEEEECCCCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHH
Confidence 43322 2333322 245666666655554 8888553 2 898765 577999999999
Q ss_pred HHH
Q 015435 399 IHA 401 (407)
Q Consensus 399 l~~ 401 (407)
|++
T Consensus 373 l~~ 375 (376)
T TIGR01977 373 LSE 375 (376)
T ss_pred Hhh
Confidence 875
No 198
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=1.6e-20 Score=177.36 Aligned_cols=278 Identities=15% Similarity=0.115 Sum_probs=189.6
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHh----hcCc
Q 015435 73 PIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFT----LAGL 148 (407)
Q Consensus 73 ~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~----~~G~ 148 (407)
+......|+++++++. +. +++++ ++||++++.+++ ...+.+||+|++++|+|......+. ..|.
T Consensus 50 ~~pt~~~L~~~lA~l~-g~-------~~~i~--~~sg~~Ai~~~l--~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi 117 (386)
T PRK08045 50 GNPTRDVVQRALAELE-GG-------AGAVL--TNTGMSAIHLVT--TVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCY 117 (386)
T ss_pred CCccHHHHHHHHHHHh-CC-------CeEEE--ECCHHHHHHHHH--HHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCe
Confidence 4556889999999987 42 46888 999999999984 4557899999999999996554433 2344
Q ss_pred eeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCC
Q 015435 149 SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSL 228 (407)
Q Consensus 149 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~ 228 (407)
++..++ ..|++++++.+. ++++++++ ++|+||||.+++ +++|+++|+++|+++|+|++|.......
T Consensus 118 ~v~~vd-------~~d~e~l~~~l~--~~tklV~l-~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~~~- 183 (386)
T PRK08045 118 RVLFVD-------QGDEQALRAALA--EKPKLVLV-ESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPALQN- 183 (386)
T ss_pred EEEEeC-------CCCHHHHHHhcc--cCCeEEEE-ECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccCC-
Confidence 555442 258899999887 56778777 899999999886 6777888999999999999997654321
Q ss_pred CchhHHHHHHHHcCCcEEEEEecCcccc-ccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcC
Q 015435 229 DADAQSVRMFVADGGECLVAQSYAKNMG-LYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKD 307 (407)
Q Consensus 229 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 307 (407)
++ ..+ ..++++|++|.++ .++.+.|++ ++.++++.++ +.........+.+++.+..+...|+.
T Consensus 184 -----pl----~~g-aDivv~S~tK~l~G~~d~~~G~v--i~~~~~~~~~----l~~~~~~~g~~~~p~~~~l~~rgl~t 247 (386)
T PRK08045 184 -----PL----ALG-ADLVLHSCTKYLNGHSDVVAGVV--IAKDPDVVTE----LAWWANNIGVTGGAFDSYLLLRGLRT 247 (386)
T ss_pred -----ch----hhC-CCEEEeecceeccCCCCceeEEE--EeCcHHHHHH----HHHHHHhcCCCCCHHHHHHHHhhhcc
Confidence 11 111 2388999999986 455678888 5766654443 44344444556777777777766664
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CCC-----ccc----ccCCceeEEec-CCCHHHHHHhHhh
Q 015435 308 STMYKEWTLELKAMADRIISMRQQLFDALSARGT------PGD-----WSH----IIKQIGMFTFT-GLNSEQVAFMTKE 371 (407)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~-----~~~----~~~~~~~~~~~-~~~~~~~~~~l~~ 371 (407)
+..+.++..+++..+.+.|++.+. |.. ... ...-||++.+. +-+.+.+.+++++
T Consensus 248 ----------l~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~ 317 (386)
T PRK08045 248 ----------LVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGG 317 (386)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHHHHHHh
Confidence 446667778888899999887642 110 000 11235666544 2234445555554
Q ss_pred ccEEE-c--CC-----------------------------C--eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 372 YHIYM-T--SD-----------------------------G--RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 372 ~gi~~-~--~g-----------------------------g--Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
-.+.. . =| | |+|++- |+.+.+++-|.++|+.
T Consensus 318 l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~ 382 (386)
T PRK08045 318 LSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI---EDGEDLIADLENGFRA 382 (386)
T ss_pred ccceeEeccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHHH
Confidence 44331 1 11 1 888873 7899999999998874
No 199
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.89 E-value=1.4e-20 Score=178.48 Aligned_cols=280 Identities=17% Similarity=0.147 Sum_probs=184.7
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHH----HHhhcCce
Q 015435 74 IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPK----VFTLAGLS 149 (407)
Q Consensus 74 ~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~----~~~~~G~~ 149 (407)
.....+|++.++++. +. +..++ ++||++++.+++ ...+.+||+|+++.|.|..... .+...|++
T Consensus 58 ~p~~~~le~~lA~l~-g~-------~~av~--~~sG~~Ai~~~l--~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~ 125 (391)
T TIGR01328 58 NPTVSNLEGRIAFLE-GT-------EAAVA--TSSGMGAIAATL--LTILKAGDHLISDECLYGCTFALLEHALTKFGIQ 125 (391)
T ss_pred CchHHHHHHHHHHHh-CC-------CcEEE--ECCHHHHHHHHH--HHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeE
Confidence 345778999999988 53 45677 899999998874 4457899999999998875443 34568888
Q ss_pred eeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCC
Q 015435 150 VKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLD 229 (407)
Q Consensus 150 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~ 229 (407)
++.++.. |++++++.+. +++++|++ ++|+||||.+.+ +++|+++|+++|+++|+|++|.......
T Consensus 126 ~~~vd~~-------d~e~l~~~i~--~~tklV~l-e~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~~-- 190 (391)
T TIGR01328 126 VDFINMA-------IPEEVKAHIK--DNTKIVYF-ETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLTN-- 190 (391)
T ss_pred EEEECCC-------CHHHHHHhhc--cCCeEEEE-ECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccCC--
Confidence 8888651 7889999887 56777777 899999999775 7788888999999999999987544321
Q ss_pred chhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChh
Q 015435 230 ADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDST 309 (407)
Q Consensus 230 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 309 (407)
+ + . ....++++|+||.++.+|.++|++ ++.++++.+++...... .......+...+..+...++.
T Consensus 191 ----~---~-~-~g~Divv~S~sK~lgg~g~~~gG~--v~~~~~li~~l~~~~~~--~~~g~~l~~~~a~l~l~~L~t-- 255 (391)
T TIGR01328 191 ----P---V-A-LGVDVVVHSATKYIGGHGDVVAGL--ICGKAELLQQIRMVGIK--DMTGSVISPFDAWLILRGLKT-- 255 (391)
T ss_pred ----c---h-h-cCCCEEEccccccccCCCCceEEE--EEcCHHHHHHHHHHHHH--hCCCCCCCcHHHHHHHhCcCc--
Confidence 1 1 1 123488899999999999886555 35666655544331111 111223344344444433332
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CCCcc---------cccCCceeEEec-CCCHHHHHHhHhhcc
Q 015435 310 MYKEWTLELKAMADRIISMRQQLFDALSARGT------PGDWS---------HIIKQIGMFTFT-GLNSEQVAFMTKEYH 373 (407)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~~~---------~~~~~~~~~~~~-~~~~~~~~~~l~~~g 373 (407)
+....++..++.+.+.+.|++.+. |..-+ .....||++.+. +-+.+.+.++++.-.
T Consensus 256 --------l~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~f~~~l~ 327 (391)
T TIGR01328 256 --------LNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGFAGAKKLLNNLK 327 (391)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCHHHHHHHHHhCC
Confidence 344556677788888888887542 11000 011236676654 223444555555544
Q ss_pred EEE-cC--C-----------------------------C--eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 374 IYM-TS--D-----------------------------G--RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 374 i~~-~~--g-----------------------------g--Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
+.. .+ | | |||++- |+.+.+++-|.++|+.+
T Consensus 328 ~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~~ 391 (391)
T TIGR01328 328 LIRLAVSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGL---EDADDLIADLKQALDAL 391 (391)
T ss_pred cceEecCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHhhC
Confidence 432 11 1 1 888773 88999999999998764
No 200
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.89 E-value=1.1e-20 Score=178.42 Aligned_cols=278 Identities=15% Similarity=0.114 Sum_probs=184.5
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHh----hcCc
Q 015435 73 PIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFT----LAGL 148 (407)
Q Consensus 73 ~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~----~~G~ 148 (407)
+......+++.++++. +. +++++ ++|+++++.+++ ...+.+||+|+++.|+|......+. ..|.
T Consensus 49 ~~p~~~~le~~lA~l~-g~-------~~v~~--~~gg~~Ai~~~l--~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~ 116 (382)
T TIGR02080 49 GNPTRDLLQQALAELE-GG-------AGAVV--TNTGMSAIHLVT--TALLGPDDLLVAPHDCYGGTYRLLNALAKKGCF 116 (382)
T ss_pred CCchHHHHHHHHHHHh-CC-------CcEEE--EcCHHHHHHHHH--HHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCe
Confidence 4556788999999987 42 67888 999999999984 4457899999999999987655443 2244
Q ss_pred eeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCC
Q 015435 149 SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSL 228 (407)
Q Consensus 149 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~ 228 (407)
++..++ ..|++++++++. ++++++++ ++|+||||.+++ +++|+++|+++|+++|+|++|..+....
T Consensus 117 ~v~~~d-------~~d~~~l~~ai~--~~tklV~l-~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~- 182 (382)
T TIGR02080 117 RVLFVD-------QGDEQALRAALA--QKPKLVLI-ETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQN- 182 (382)
T ss_pred EEEEEC-------CCCHHHHHHhcC--cCceEEEE-ECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 444432 147899999887 56777777 899999999886 6678888999999999999997654321
Q ss_pred CchhHHHHHHHHcCCcEEEEEecCcccc-ccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcC
Q 015435 229 DADAQSVRMFVADGGECLVAQSYAKNMG-LYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKD 307 (407)
Q Consensus 229 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 307 (407)
++. + ...++++|+||.++ .++++.|++ ++.++++.+++ .........+.+++.+..+...++
T Consensus 183 -----pl~-~----gaDivv~S~sK~l~G~~~~~~G~i--~~~~~~~~~~l----~~~~~~~g~~~sp~~a~l~lr~l~- 245 (382)
T TIGR02080 183 -----PLA-L----GADLVLHSCTKYLNGHSDVIAGAV--IAKDPQVAEEL----AWWANNLGVTGGAFDSYLTLRGLR- 245 (382)
T ss_pred -----chh-h----CCCEEEeecceeccCCCCceeEEE--EeCCHHHHHHH----HHHHHccCCCCCHHHHHHHHcccc-
Confidence 111 1 12488899999986 467889998 57666654443 333333344556655555543333
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CCC-----ccc----ccCCceeEEec-CCCHHHHHHhHhh
Q 015435 308 STMYKEWTLELKAMADRIISMRQQLFDALSARGT------PGD-----WSH----IIKQIGMFTFT-GLNSEQVAFMTKE 371 (407)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~-----~~~----~~~~~~~~~~~-~~~~~~~~~~l~~ 371 (407)
.+..+.++..++...+.++|++.+. |.. .+. ...-||++.+. .-+.+.+..+++.
T Consensus 246 ---------tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~ 316 (382)
T TIGR02080 246 ---------TLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEQTVRRFLGG 316 (382)
T ss_pred ---------hHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcHHHHHHHHHc
Confidence 3444566777888888888886542 110 000 01235666554 2233444444444
Q ss_pred ccE---EEcCC-----------------------------C--eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 372 YHI---YMTSD-----------------------------G--RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 372 ~gi---~~~~g-----------------------------g--Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
-.+ .++=| | |||++- |+.+.+++-|.++|+.
T Consensus 317 l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl---E~~~dl~~dl~~al~~ 381 (382)
T TIGR02080 317 LSLFTLAESLGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVGL---EDADDLIADLEQGLRA 381 (382)
T ss_pred CCcceEeccCCCCcceeECCCccCcccCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 333 21111 1 888873 8899999999998864
No 201
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.89 E-value=4.6e-21 Score=183.32 Aligned_cols=344 Identities=13% Similarity=0.127 Sum_probs=213.7
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhcccccc-ccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRV-KEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
...++++||+..|....+.| ..++.+++++.+++. ..... ..+.+.....++.+.+++...+. ..+.+++
T Consensus 36 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~-~l~~~~~~~~~~~~~~~la~~l~~~~p~~-----~~~~v~f-- 106 (425)
T PRK07495 36 DKEGRRYIDFAAGIAVVNTG-HRHPRVIAAVKAQLD-RFTHTCHQVVPYENYVRLAERLNALVPGD-----FAKKTIF-- 106 (425)
T ss_pred eCCCCEEEEccccHHhhccC-CCCHHHHHHHHHHHh-hccCcccCccCCHHHHHHHHHHHHhCCCC-----CCCEEEE--
Confidence 45678999999997655667 667788888888876 11111 11223333445566666554110 0157999
Q ss_pred cCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhh-cC-------------ceeeEEEeecCCCCCcC----hhh
Q 015435 106 CLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTL-AG-------------LSVKTYRYYDPATRGLN----FQG 167 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~-~G-------------~~~~~v~~~~~~~~~~d----~~~ 167 (407)
++||++|++.++++.+......+|+...-+|++....... .| ..+..+|..+.. .+.+ +++
T Consensus 107 ~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~ 185 (425)
T PRK07495 107 VTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVEQSLAA 185 (425)
T ss_pred CCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc-ccccHHHHHHH
Confidence 9999999999998887765556888888888776432211 11 022334432111 1222 344
Q ss_pred HHHHHHc---CCCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCC
Q 015435 168 LLEDLRA---APSGAIVLLHACAHNPTGV-DPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGG 243 (407)
Q Consensus 168 l~~~i~~---~~~~~~v~i~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~ 243 (407)
+++.+.+ ..+..++++.+..+| +|. .++.+.+++|.++|++||+++|+||++.+|...+. .+.... .+
T Consensus 186 l~~~~~~~~~~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~---~~a~~~----~g 257 (425)
T PRK07495 186 LDKLFKADVDPQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGK---LFAMEH----HE 257 (425)
T ss_pred HHHHHHhccCCCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCC---ceeecc----cC
Confidence 5666542 134567777666666 774 58999999999999999999999999998876542 222111 12
Q ss_pred cEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHH
Q 015435 244 ECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMAD 323 (407)
Q Consensus 244 ~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 323 (407)
...-+.++||.++ +|+|+|++ +++ +++.+.+.......+++.+++++.++.+.++-.. -..+.+
T Consensus 258 v~pDi~tlsK~l~-~G~pigav--~~~-----~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~--------~~~l~~ 321 (425)
T PRK07495 258 VAADLTTMAKGLA-GGFPLAAV--TGR-----AEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIE--------EEDLCE 321 (425)
T ss_pred CCCCEEeehhhhc-CCccceEE--EEc-----HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHH--------hchHHH
Confidence 2334678999998 89999999 565 4455544433334455778888887666654221 113445
Q ss_pred HHHHHHHHHHHHHHhcC--CCCCcccccCCceeEEecCCC-----------HHHHHHhHhhccEEEcCC---C---eEEe
Q 015435 324 RIISMRQQLFDALSARG--TPGDWSHIIKQIGMFTFTGLN-----------SEQVAFMTKEYHIYMTSD---G---RISM 384 (407)
Q Consensus 324 ~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~gi~~~~g---g---Ris~ 384 (407)
+++++.+++.+.|+++- .+. +..+.. -|++.|+.+. ...+...+.++|+.+.+. + ||..
T Consensus 322 ~~~~~g~~l~~~L~~l~~~~~~-i~~vrG-~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g~~~~~~r~~P 399 (425)
T PRK07495 322 RANQLGNRLKQRLASLRETVPE-IADIRG-PGFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTCGVHGNVIRFLA 399 (425)
T ss_pred HHHHHHHHHHHHHHHHHhhCCC-eeeeec-CceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEeC
Confidence 55556666666665431 110 111222 2677776441 122444455689998663 2 6654
Q ss_pred cC-CCCCChhHHHHHHHHHHHhh
Q 015435 385 AG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 385 ~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
.- ++++++++++++|.++++++
T Consensus 400 pl~it~~~id~~~~~l~~~l~~~ 422 (425)
T PRK07495 400 PITIQDDVFAEALDILEASILEA 422 (425)
T ss_pred CCccCHHHHHHHHHHHHHHHHHH
Confidence 32 58899999999999999764
No 202
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.89 E-value=3e-21 Score=187.58 Aligned_cols=267 Identities=13% Similarity=0.108 Sum_probs=170.9
Q ss_pred CCceEEeecCCcccHHHHHHHHHHh-hcCCCeEEecCCCCCChHHHHhh----cCceeeEEEeecCCCCCcChhhHHHHH
Q 015435 98 DNRVTTVQCLSGTGSLRVGAEFLAR-HYHQLTIYIPQPTWGNHPKVFTL----AGLSVKTYRYYDPATRGLNFQGLLEDL 172 (407)
Q Consensus 98 ~~~i~~~~t~g~t~a~~~~~~~~~~-~~~gd~Vi~~~p~y~~~~~~~~~----~G~~~~~v~~~~~~~~~~d~~~l~~~i 172 (407)
.+++.+ |+|+|++++.+. .+. ..+||+|+++++.|+.+...++. .|.+++.++.. ++ .+|++++++.+
T Consensus 129 ~~~v~~--~~g~t~~~~~~~--~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~--~~-~~d~~~l~~~i 201 (447)
T PRK00451 129 VANASM--YDGATALAEAAL--MAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYE--DG-VTDLEALEAAV 201 (447)
T ss_pred cceEEe--cCcHHHHHHHHH--HHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCC--CC-CCCHHHHHHhc
Confidence 468889 999999998874 333 36899999999999999887764 69999999983 34 79999999998
Q ss_pred HcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeee--ccccccccCCCCCchhHHHHHHHHcCCcEEEEE-
Q 015435 173 RAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFF--DSAYQGFASGSLDADAQSVRMFVADGGECLVAQ- 249 (407)
Q Consensus 173 ~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~--D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~- 249 (407)
+ ++++++++ ++| ||||.+. ++++|+++|+++|+++++ |.+..++... ....+..+++.
T Consensus 202 ~--~~t~~v~l-~~p-n~tG~v~---~l~~I~~~a~~~~~~~iv~~d~~~~g~~~~------------~~~~~~D~~~~s 262 (447)
T PRK00451 202 D--DDTAAVVV-QYP-NFFGVIE---DLEEIAEIAHAGGALFIVGVDPVSLGLLKP------------PGEYGADIVVGE 262 (447)
T ss_pred C--CCeEEEEE-ECC-CCCCeeC---CHHHHHHHHHHCCCEEEEEcChHHhccCCC------------cccCCCCEEEEC
Confidence 7 56777777 678 8999964 588889999999999988 5432211100 01112234444
Q ss_pred --ecCccccccCCCcceeEEeecChhhHHHHHHH------------------------HhhhhhcccCCCChhHH-HHHH
Q 015435 250 --SYAKNMGLYGERVGALSIVCKTEDVASRVESQ------------------------LKLVIRPMYSSPPIHGA-SIVA 302 (407)
Q Consensus 250 --s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~-~~~~ 302 (407)
+|||.+.++|+|+||+ +++ +++.+.+... .+........+.+...+ .++.
T Consensus 263 ~~k~~~~~~~~Gpg~G~l--~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa 339 (447)
T PRK00451 263 GQPLGIPLSFGGPYLGFF--ATR-KKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAA 339 (447)
T ss_pred CCcCCCCCCCCCCCchHH--Hhh-HHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHH
Confidence 7888888889999998 454 3333321000 01111111112222222 2222
Q ss_pred HHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEe--cC--CCHHHHHHhHhhccEEE--
Q 015435 303 TILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTF--TG--LNSEQVAFMTKEYHIYM-- 376 (407)
Q Consensus 303 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~l~~~gi~~-- 376 (407)
..+.... ...+++.++++.++++++.+.|++.+. +.+. .+.+|.+ +. .+.+.+.+.|.++||..
T Consensus 340 ~~l~~~~-----~~g~~~~~~~~~~~~~~l~~~L~~~~g---~~~~--~~~~~~~~~v~~~~~~~~~~~~L~~~gi~~~~ 409 (447)
T PRK00451 340 IYMSLLG-----PEGLRELAEQNHQKAHYLAERLAEIGG---VELF--DGPFFNEFVVRLPKPAEEVNEALLEKGILGGY 409 (447)
T ss_pred HHHHHHC-----HHHHHHHHHHHHHHHHHHHHHHhhcCC---EEec--CCCeEEEEEEecCCCHHHHHHHHHhcCCCCCc
Confidence 2222110 145778889999999999999998753 5544 3344433 33 34444444444466542
Q ss_pred --cCC-----C--eEEecC-CCCCChhHHHHHHHHHH
Q 015435 377 --TSD-----G--RISMAG-LSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 377 --~~g-----g--Ris~~~-~~~e~i~~~~~~l~~~l 403 (407)
.+. + |+++.. .++++++++++.|++++
T Consensus 410 ~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 410 DLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred ccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 111 2 888863 47899999999998764
No 203
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.89 E-value=8.6e-21 Score=175.40 Aligned_cols=325 Identities=15% Similarity=0.120 Sum_probs=219.8
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhcccc----ccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQS----RVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
+++++||++..+ .|....+.+++++.+.+..... ...-++...-+.+|.+.+|+|+ +. +..++
T Consensus 38 ~~~~~nf~SNdY---LGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~-g~-------e~al~-- 104 (388)
T COG0156 38 GRKVLNFCSNDY---LGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL-GA-------EAALL-- 104 (388)
T ss_pred CceeEeeeccCc---ccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh-CC-------CcEEE--
Confidence 578999999988 6766677888888888862111 1111223334788999999988 65 45555
Q ss_pred cCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCC-C--CcEEE
Q 015435 106 CLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAP-S--GAIVL 182 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~-~--~~~v~ 182 (407)
.++|=.|+..+ +...++++|.|+.....|.+..+.++..+++++.++. .|++.|++.+.+.+ . ++.++
T Consensus 105 f~SGy~AN~~~--i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~I 175 (388)
T COG0156 105 FSSGFVANLGL--LSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLI 175 (388)
T ss_pred EcccchhHHHH--HHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEE
Confidence 56666666666 3455778899999999999999999999999999976 37788888887421 1 24445
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHH-HHHHH-cCCcEEEEEecCccccccCC
Q 015435 183 LHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSV-RMFVA-DGGECLVAQSYAKNMGLYGE 260 (407)
Q Consensus 183 i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~-~~~~~-~~~~~i~~~s~sK~~~~~G~ 260 (407)
++...-.-.|.+ .+|++|++++++|+.+|++||+|+-..+++. ...+ ..+.- ..+..|+++||||++|..|
T Consensus 176 vtegVfSMdGdi---ApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~---GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G- 248 (388)
T COG0156 176 VTEGVFSMDGDI---APLPELVELAEKYGALLYVDEAHAVGVLGPN---GRGLAEHFGLEPEEVDIIVGTLGKALGSSG- 248 (388)
T ss_pred EEeccccCCCCc---CCHHHHHHHHHHhCcEEEEEccccccccCCC---CccHHHHhCCCCccceEEEEEchhhhcccC-
Confidence 545555556774 4699999999999999999999987777632 1222 12222 2455899999999999766
Q ss_pred CcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015435 261 RVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARG 340 (407)
Q Consensus 261 r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 340 (407)
|++ +.+..+.+.++...+.+.. +.+.|+....++...++.. +.....+++++++..++.+.+...+
T Consensus 249 --g~v---~g~~~~~d~L~~~ar~~if--StalpP~~aaa~~~al~~l-------~~~~~~r~~L~~~~~~~~~~~~~~~ 314 (388)
T COG0156 249 --GYI---AGSAALIDYLRNRARPFIF--STALPPAVAAAALAALRIL-------EEGPERRERLQELAAFFRSLLKALG 314 (388)
T ss_pred --cee---eCcHHHHHHHHHhCCceec--cCCCCHHHHHHHHHHHHHH-------HhCHHHHHHHHHHHHHHHHHHHhcC
Confidence 676 6666666666554444432 2244444444555555533 2345778888899999997777767
Q ss_pred CCCCcccccCCceeEEec-CC---CHHHHHHhHhhccEEEcCC-------C----eEEecC-CCCCChhHHHHHHHHH
Q 015435 341 TPGDWSHIIKQIGMFTFT-GL---NSEQVAFMTKEYHIYMTSD-------G----RISMAG-LSSKTVPHLTDAIHAA 402 (407)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~l~~~gi~~~~g-------g----Ris~~~-~~~e~i~~~~~~l~~~ 402 (407)
+........+..++ +- ..+....++++ ||.+.+. | |+++.. +++++|+++++.+.++
T Consensus 315 ----~~~~~s~s~I~pv~~gd~~~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 315 ----LVLLPSESPIIPVILGDEERALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred ----CccCCCCCCeeeeEeCCHHHHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 44434444444333 33 22334566665 9998654 3 788764 6889999999888764
No 204
>PRK07505 hypothetical protein; Provisional
Probab=99.89 E-value=8.6e-21 Score=181.70 Aligned_cols=327 Identities=14% Similarity=0.103 Sum_probs=189.2
Q ss_pred cCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccC-----CCCCCcHHHHHHHHHHHhCCCCCCCCCCceE
Q 015435 28 DTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEY-----LPIVGLVDFNKLSAKLILGADSPAIKDNRVT 102 (407)
Q Consensus 28 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y-----~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~ 102 (407)
..+..++||+...+ .|...++++++++.+++. ........ .......++++.+++++ +. +.+
T Consensus 43 ~~g~~~ld~~s~~~---lgl~~~p~v~~A~~~~l~-~~g~~~~~~~~~~~~~~~~~~l~~~la~~~-~~--------~~~ 109 (402)
T PRK07505 43 ADGHTFVNFVSCSY---LGLDTHPAIIEGAVDALK-RTGSLHLSSSRTRVRSQILKDLEEALSELF-GA--------SVL 109 (402)
T ss_pred cCCceEEEeecCCc---cCCCCCHHHHHHHHHHHH-HhCCCCCCccchhhhhHHHHHHHHHHHHHh-CC--------CEE
Confidence 35688999987543 453446677777777775 11101111 11224566777777766 31 345
Q ss_pred EeecCCcccHHHHHHHHHHh-h-cCCC-eEEecCCCCCChH---HHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCC
Q 015435 103 TVQCLSGTGSLRVGAEFLAR-H-YHQL-TIYIPQPTWGNHP---KVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAP 176 (407)
Q Consensus 103 ~~~t~g~t~a~~~~~~~~~~-~-~~gd-~Vi~~~p~y~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 176 (407)
+ +++|+++.+.++++... . .+|+ .|++.+..|++-. ......+.+++.+|. .|++++++++. +
T Consensus 110 ~--~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~--~ 178 (402)
T PRK07505 110 T--FTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICK--T 178 (402)
T ss_pred E--ECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHh--c
Confidence 4 55677788877655432 1 2233 3667776554321 112223556666654 37889999886 4
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHH-cCCcEEEEEecCccc
Q 015435 177 SGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVA-DGGECLVAQSYAKNM 255 (407)
Q Consensus 177 ~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~ 255 (407)
++.++++ ++|+||||.+.+ +++|.++|++||++||+||+|....++. .........+.. ..+.+++++|+||.+
T Consensus 179 ~~~~~vl-~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~-~g~~~~~~~~~~~~~d~~i~~~s~sK~~ 253 (402)
T PRK07505 179 NKTVAYV-ADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGK-NGEGYVRSELDYRLNERTIIAASLGKAF 253 (402)
T ss_pred CCCEEEE-EecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCC-CCCchHHHHcCCCCCCCeEEEEechhhh
Confidence 4566666 789999999887 6777788999999999999985433321 111222222322 357789999999999
Q ss_pred cccCCCcceeEEeecChhhHHHHHHHHhhhhhcccC--CCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHH
Q 015435 256 GLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYS--SPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLF 333 (407)
Q Consensus 256 ~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 333 (407)
+.+| ||+ +++++++.+.+. .....+++ +++..++.++...++-.. ++.+.+.+++++++.+.+.
T Consensus 254 ~~~G---g~~--~~~~~~~~~~~~----~~~~~~t~~~~~~~~a~aa~~a~l~~~~-----~~~~~~~~~~l~~~~~~~~ 319 (402)
T PRK07505 254 GASG---GVI--MLGDAEQIELIL----RYAGPLAFSQSLNVAALGAILASAEIHL-----SEELDQLQQKLQNNIALFD 319 (402)
T ss_pred hccC---eEE--EeCCHHHHHHHH----HhCCCceeCCCCCHHHHHHHHHHHHHHh-----ccCcHHHHHHHHHHHHHHH
Confidence 9775 787 456665444443 33332222 344556666665554110 0123334445555554443
Q ss_pred HHHHhcCCCCCcccccCCceeEEec--CC--CHHHHHHhHhhccEEEcCC-------C----eEEecC-CCCCChhHHHH
Q 015435 334 DALSARGTPGDWSHIIKQIGMFTFT--GL--NSEQVAFMTKEYHIYMTSD-------G----RISMAG-LSSKTVPHLTD 397 (407)
Q Consensus 334 ~~l~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~l~~~gi~~~~g-------g----Ris~~~-~~~e~i~~~~~ 397 (407)
+.+.... ...+.++.++ +- ....+.+.|.++||.+.+. + ||++.. +++++++++++
T Consensus 320 ~~~~~~~--------~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~ 391 (402)
T PRK07505 320 SLIPTEQ--------SGSFLPIRLIYIGDEDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCS 391 (402)
T ss_pred HHHHhcC--------CCCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHH
Confidence 3221110 1111111122 11 1233444445689998753 2 888763 48899999999
Q ss_pred HHHHHHHh
Q 015435 398 AIHAAVTR 405 (407)
Q Consensus 398 ~l~~~l~~ 405 (407)
+|++++++
T Consensus 392 ~l~~~l~~ 399 (402)
T PRK07505 392 LLKEILDE 399 (402)
T ss_pred HHHHHHHh
Confidence 99998864
No 205
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.89 E-value=1.3e-20 Score=178.00 Aligned_cols=276 Identities=17% Similarity=0.157 Sum_probs=189.3
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHH----HhhcCc
Q 015435 73 PIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKV----FTLAGL 148 (407)
Q Consensus 73 ~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~----~~~~G~ 148 (407)
+.....++++.++++. +. ++.++ ++||++|+..++ ...+.+||+|+++.+.|...... +...|+
T Consensus 38 ~~p~~~~le~~la~l~-g~-------~~a~~--~~sG~~Ai~~~l--~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~ 105 (369)
T cd00614 38 GNPTVDALEKKLAALE-GG-------EAALA--FSSGMAAISTVL--LALLKAGDHVVASDDLYGGTYRLFERLLPKLGI 105 (369)
T ss_pred CChhHHHHHHHHHHHH-CC-------CCEEE--EcCHHHHHHHHH--HHHcCCCCEEEECCCCcchHHHHHHHHHhhcCe
Confidence 4556888999999987 53 56778 899999999984 44578999999999999887654 346788
Q ss_pred eeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCC
Q 015435 149 SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSL 228 (407)
Q Consensus 149 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~ 228 (407)
+++.++. -|++++++++. ++++++++ .+|+||||.+.+ +++|+++|++||+++|+|++|.......
T Consensus 106 ~~~~v~~-------~d~~~l~~~i~--~~~~~v~~-e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~~- 171 (369)
T cd00614 106 EVTFVDP-------DDPEALEAAIK--PETKLVYV-ESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQR- 171 (369)
T ss_pred EEEEeCC-------CCHHHHHHhcC--CCCeEEEE-ECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcCC-
Confidence 8888765 15888998886 56777777 899999999775 7788889999999999999986544311
Q ss_pred CchhHHHHHHHHcCCcEEEEEecCccccccC-CCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcC
Q 015435 229 DADAQSVRMFVADGGECLVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKD 307 (407)
Q Consensus 229 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 307 (407)
+ + . ....+++.|+||.++.+| .+.|++ +++++++.+++. ..........+...+.++...++.
T Consensus 172 -----~---~-~-~g~Divv~S~tK~l~g~~~~~gG~v--~~~~~~l~~~l~----~~~~~~g~~~~p~~a~~~l~~l~t 235 (369)
T cd00614 172 -----P---L-E-LGADIVVHSATKYIGGHSDVIAGVV--VGSGEALIQRLR----FLRLALGTILSPFDAWLLLRGLKT 235 (369)
T ss_pred -----h---h-h-hCCcEEEeccceeccCCCCceEEEE--EeCcHHHHHHHH----HHHHhhCCCCCHHHHHHHHcCCCC
Confidence 1 1 1 134688999999998766 678888 565435444443 333333335555555555444432
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc---------------ccCCceeEEec-CCCHHHHHHhHhh
Q 015435 308 STMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSH---------------IIKQIGMFTFT-GLNSEQVAFMTKE 371 (407)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~---------------~~~~~~~~~~~-~~~~~~~~~~l~~ 371 (407)
+..+.++..++...+.+.|++.+.-..+.+ ....++++.+. +-+.+.+..+++.
T Consensus 236 ----------l~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~ 305 (369)
T cd00614 236 ----------LPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNA 305 (369)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHc
Confidence 334556777888999999988752000001 12246666654 2255666666666
Q ss_pred ccEEE-cC--C-------------------------C------eEEecCCCCCChhHHHHHHHHHH
Q 015435 372 YHIYM-TS--D-------------------------G------RISMAGLSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 372 ~gi~~-~~--g-------------------------g------Ris~~~~~~e~i~~~~~~l~~~l 403 (407)
..+.. .+ | | |+|++- |+.+.+++.|.+++
T Consensus 306 l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGl---E~~~dl~~dl~~al 368 (369)
T cd00614 306 LKLFSLAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGI---EDVEDLIADLEQAL 368 (369)
T ss_pred CCcceEcccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHhh
Confidence 55542 10 1 1 888883 88999999998876
No 206
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.89 E-value=6.6e-21 Score=179.29 Aligned_cols=275 Identities=13% Similarity=0.056 Sum_probs=186.7
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHH----hhcCc
Q 015435 73 PIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVF----TLAGL 148 (407)
Q Consensus 73 ~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~----~~~G~ 148 (407)
+......|+++++++. + ++.++ +++|++++..++ ...+.+||+|++++|+|..+...+ ...|+
T Consensus 49 ~~p~~~~Le~~lA~l~-~--------~~~v~--~~sG~~Ai~~~l--~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~ 115 (366)
T PRK07582 49 SNPTWRALEAALGELE-G--------AEALV--FPSGMAAITAVL--RALLRPGDTVVVPADGYYQVRALAREYLAPLGV 115 (366)
T ss_pred CCccHHHHHHHHHHHc-C--------CCEEE--ECCHHHHHHHHH--HHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeE
Confidence 6678899999999987 3 45666 777788998874 455789999999999998887654 45799
Q ss_pred eeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCC
Q 015435 149 SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSL 228 (407)
Q Consensus 149 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~ 228 (407)
+++.++..+. .+ .+. ++++++++ ++|+||||.+. ++++|+++|+++|+++|+|++|..... .
T Consensus 116 ~v~~v~~~~~------~~----~~~--~~t~lV~l-e~p~NPtg~v~---di~~I~~~a~~~g~~lvVD~t~~~~~~--~ 177 (366)
T PRK07582 116 TVREAPTAGM------AE----AAL--AGADLVLA-ETPSNPGLDVC---DLAALAAAAHAAGALLVVDNTTATPLG--Q 177 (366)
T ss_pred EEEEECCCCh------HH----Hhc--cCceEEEE-ECCCCCCCCcc---CHHHHHHHHHHcCCEEEEECCCCCccc--c
Confidence 9998876311 11 222 46777777 89999999754 689999999999999999999853221 1
Q ss_pred CchhHHHHHHHHcCCcEEEEEecCcccc-ccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcC
Q 015435 229 DADAQSVRMFVADGGECLVAQSYAKNMG-LYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKD 307 (407)
Q Consensus 229 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 307 (407)
.++ +. ...++++|+||.++ .+|+|+||+ +++++++.+++ ..........++...+..+...++.
T Consensus 178 ----~p~----~~-g~Divv~S~sK~l~G~~g~~~G~v--~~~~~~l~~~l----~~~~~~~g~~~~~~~a~l~~r~l~t 242 (366)
T PRK07582 178 ----RPL----EL-GADLVVASDTKALTGHSDLLLGYV--AGRDPELMAAV----ERWRLLAGAIPGPFEAWLAHRSLGT 242 (366)
T ss_pred ----Cch----hc-CCcEEEecccccccCCCCeeEEEE--EcCcHHHHHHH----HHHHHHhCCCCCHHHHHHHHhcccc
Confidence 111 11 12378899999984 467899999 56666544443 3333333445666666666655553
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc----c-----------CCceeEEecCCCHHHHHHhHhhc
Q 015435 308 STMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHI----I-----------KQIGMFTFTGLNSEQVAFMTKEY 372 (407)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~-----------~~~~~~~~~~~~~~~~~~~l~~~ 372 (407)
. ....++..++...+.+.|++.+.-..+.+. . ..||++.|.--+.+.+.+.+++.
T Consensus 243 l----------~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~~~~~~~~~~~l 312 (366)
T PRK07582 243 L----------GLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELADAAAAERFVAAS 312 (366)
T ss_pred H----------HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCCHHHHHHHHHhC
Confidence 3 344466667888888888876521001110 1 14677765422666677777777
Q ss_pred cEEEc-C--C------------------C--eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 373 HIYMT-S--D------------------G--RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 373 gi~~~-~--g------------------g--Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
++... + | + |+|++- |+.+.+++.|.++|+.+
T Consensus 313 ~~~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGl---E~~~dli~dl~~al~~~ 366 (366)
T PRK07582 313 RLVVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGI---EDTDDLVADLERALDAL 366 (366)
T ss_pred CcceecccCCCccchhhhHHHcCCCCCCCeEEEEecc---CCHHHHHHHHHHHHhhC
Confidence 76543 1 1 2 888774 78899999999988764
No 207
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=1.9e-20 Score=177.88 Aligned_cols=276 Identities=16% Similarity=0.140 Sum_probs=182.7
Q ss_pred CCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCCh----HHHHhhcCcee
Q 015435 75 VGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNH----PKVFTLAGLSV 150 (407)
Q Consensus 75 ~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~----~~~~~~~G~~~ 150 (407)
.....+++.++++. +. ++.++ ++||++++.+++ ...+.+||+|+++.|.|... .......|.++
T Consensus 60 p~~~~Le~~lA~l~-g~-------~~~v~--~~sG~~Ai~~~l--~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v 127 (405)
T PRK08776 60 PTRDLLGEALAELE-GG-------AGGVI--TATGMGAINLVL--NALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFAL 127 (405)
T ss_pred hHHHHHHHHHHHHh-CC-------CceEE--EcCHHHHHHHHH--HHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEE
Confidence 34577888888876 42 23455 677789998884 44578999999999999873 34445668788
Q ss_pred eEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCc
Q 015435 151 KTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDA 230 (407)
Q Consensus 151 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~ 230 (407)
+.++. .|++++++.+. ++++++++ ++|+||||.+. ++++|+++|+++|+++|+|++|......
T Consensus 128 ~~v~~-------~d~~~l~~~i~--~~tklV~l-~~P~NPtG~v~---dl~~I~~la~~~gi~vIvD~a~a~~~~~---- 190 (405)
T PRK08776 128 ITADL-------TDPRSLADALA--QSPKLVLI-ETPSNPLLRIT---DLRFVIEAAHKVGALTVVDNTFLSPALQ---- 190 (405)
T ss_pred EEECC-------CCHHHHHHhcC--cCCeEEEE-ECCCCCCCccC---CHHHHHHHHHHcCCEEEEECCCcccccC----
Confidence 77754 37889998886 56777777 89999999974 6889999999999999999999643211
Q ss_pred hhHHHHHHHHcCCcEEEEEecCccccccC-CCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChh
Q 015435 231 DAQSVRMFVADGGECLVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDST 309 (407)
Q Consensus 231 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 309 (407)
.++ . ....+++.|.+|.++.+| ...|++ +++++++.+++.. .......+++.+.+.++...++
T Consensus 191 --~pl----~-~gaDivv~S~tK~l~g~~~~~~G~v--v~~~~~l~~~l~~----~~~~~g~~~s~~~a~l~~~gl~--- 254 (405)
T PRK08776 191 --KPL----E-FGADLVLHSTTKYINGHSDVVGGAV--VARDAELHQQLVW----WANALGLTGSPFDAFLTLRGLR--- 254 (405)
T ss_pred --Ccc----c-ccCCEEEecCceeecCCCCceEEEE--EeCCHHHHHHHHH----HHHhcCCCCCHHHHHHHHhhhC---
Confidence 111 1 122488999999998654 567887 5777665555433 2222233456666666554333
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CCC-----ccc----ccCCceeEEec-CCCHHHHHHhHhhcc
Q 015435 310 MYKEWTLELKAMADRIISMRQQLFDALSARGT------PGD-----WSH----IIKQIGMFTFT-GLNSEQVAFMTKEYH 373 (407)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~-----~~~----~~~~~~~~~~~-~~~~~~~~~~l~~~g 373 (407)
.++.+.++..++...+.+.|++.+. |.. ... ....||++.+. +-+.+.+.++++...
T Consensus 255 -------tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~ 327 (405)
T PRK08776 255 -------TLDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVRAFVDGLR 327 (405)
T ss_pred -------cHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCHHHHHHHHHhCC
Confidence 3566777888899999999987642 110 000 01235666654 224444555555544
Q ss_pred EEE-cC--C-------------------------C------eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 374 IYM-TS--D-------------------------G------RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 374 i~~-~~--g-------------------------g------Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
+.. .+ | | |+|++- |+.+.+++-|+++|+.
T Consensus 328 l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liR~svGl---E~~~dli~dl~~al~~ 390 (405)
T PRK08776 328 YFTLAESLGGVESLIAHPASMTHAAMTAEARAAAGISDGLLRLSVGI---ESAEDLLIDLRAGLAR 390 (405)
T ss_pred cceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHHH
Confidence 422 11 1 1 888873 7788888888887764
No 208
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.88 E-value=7.4e-21 Score=182.14 Aligned_cols=289 Identities=15% Similarity=0.164 Sum_probs=190.0
Q ss_pred CcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHh--hcCCCeEEecCCCCCChHHHH---hhcCcee
Q 015435 76 GLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLAR--HYHQLTIYIPQPTWGNHPKVF---TLAGLSV 150 (407)
Q Consensus 76 g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~--~~~gd~Vi~~~p~y~~~~~~~---~~~G~~~ 150 (407)
.++++|+.+++++ +. ++++|++ |+|+|+++.+++..+.. ..+||+|+++.+.|+.+...+ +..|.++
T Consensus 48 ~~~~~r~~la~~~-g~-----~~~~v~~--~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v 119 (402)
T TIGR02006 48 AVENARNQVAELI-GA-----DSREIVF--TSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEV 119 (402)
T ss_pred HHHHHHHHHHHHh-CC-----CCCeEEE--eCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEE
Confidence 4667788888887 42 2478999 99999999988544322 258999999999998876654 3569999
Q ss_pred eEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCc
Q 015435 151 KTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDA 230 (407)
Q Consensus 151 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~ 230 (407)
+.++.. .++.+|++.+++.+. ++++++++ ++++||||++.+ +++|+++|+++|+++++|++++.... +.
T Consensus 120 ~~v~~~--~~~~~d~~~l~~~l~--~~~~lv~v-~~~~n~tG~~~~---~~~I~~l~~~~g~~livD~a~a~g~~-~~-- 188 (402)
T TIGR02006 120 TYLPPK--SNGLIDLEELKAAIR--DDTILVSI-MHVNNEIGVIQD---IAAIGEICRERKVFFHVDAAQSVGKI-PI-- 188 (402)
T ss_pred EEEccC--CCCcCCHHHHHHhcC--CCCEEEEE-ECCCcCceeccc---HHHHHHHHHHcCCEEEEEcchhcCCc-cc--
Confidence 999883 456789999999987 55666666 899999999764 77888889999999999999753221 11
Q ss_pred hhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhh---hhcccCCCChhHHHHHHHHhcC
Q 015435 231 DAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLV---IRPMYSSPPIHGASIVATILKD 307 (407)
Q Consensus 231 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~ 307 (407)
.+ ......+++.|.+|.+|.+| +|++ ++.++.. .++....... .+....+++.....++...++-
T Consensus 189 ---~~----~~~~~D~~~~s~~K~~gp~G--~G~l--~~~~~~~-~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~ 256 (402)
T TIGR02006 189 ---NV----NELKVDLMSISGHKIYGPKG--IGAL--YVRRKPR-VRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRI 256 (402)
T ss_pred ---Cc----cccCCCEEEEehhhhcCCCc--eEEE--EEccCCC-CCCCceecCCCccCCccCCCccHHHHHHHHHHHHH
Confidence 11 11234578888899877556 6777 3553211 1111101000 0111224455555555455542
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc------cCCceeEEecCCCHHHHHHhHhhccEEEcCC--
Q 015435 308 STMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHI------IKQIGMFTFTGLNSEQVAFMTKEYHIYMTSD-- 379 (407)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~g-- 379 (407)
. ....+...+++++.++++.+.|++++. +.+. .|....+.+.+.+.+.+...++ ++.+..|
T Consensus 257 ~------~~~~~~~~~~~~~l~~~l~~~l~~~~~---v~~~~~~~~~~p~~~~v~f~~~~~~~~~~~l~--~i~v~~G~~ 325 (402)
T TIGR02006 257 A------KEEMAQDTAHVLALRDRLLNGIKSIEE---VYLNGDLEHRVPGNLNVSFNYVEGESLIMALK--DLAVSSGSA 325 (402)
T ss_pred H------HHhHHHHHHHHHHHHHHHHHHHhcCCC---EEEeCCccccCCCeEEEEEeCcCHHHHHHhcC--CEEEechhh
Confidence 2 134666778899999999999987542 2222 1222235555566655544443 5544322
Q ss_pred -----------------------C--eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 380 -----------------------G--RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 380 -----------------------g--Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
| |+|++. .+++|++++++.|+++++.+
T Consensus 326 c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~ 378 (402)
T TIGR02006 326 CTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKL 378 (402)
T ss_pred cCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 2 999876 47799999999999987653
No 209
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=2.1e-20 Score=177.17 Aligned_cols=277 Identities=17% Similarity=0.152 Sum_probs=181.3
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHh----hcCc
Q 015435 73 PIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFT----LAGL 148 (407)
Q Consensus 73 ~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~----~~G~ 148 (407)
+.....+|+++++++. +. +..++ ++||++|+.+++ ...+.+||+|++++|+|......+. ..|+
T Consensus 59 ~~p~~~~Le~~lA~~~-g~-------~~~i~--~~sG~~Ai~~~l--~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi 126 (388)
T PRK07811 59 GNPTRTALEEQLAALE-GG-------AYGRA--FSSGMAATDCLL--RAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGV 126 (388)
T ss_pred CCccHHHHHHHHHHHh-CC-------CceEE--eCCHHHHHHHHH--HHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCe
Confidence 4567899999999988 43 33455 667799999984 4447899999999999986544333 3577
Q ss_pred eeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCC
Q 015435 149 SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSL 228 (407)
Q Consensus 149 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~ 228 (407)
+++.++. .|++++++.+. +++++|++ ++|+||||.+ .++++|+++|+++|+++|+|++|+......
T Consensus 127 ~~~~~d~-------~d~e~l~~~i~--~~tklV~i-e~p~NPtg~~---~dl~~I~~la~~~gi~lIvD~a~a~~~~~~- 192 (388)
T PRK07811 127 EYTPVDL-------SDLDAVRAAIT--PRTKLIWV-ETPTNPLLSI---TDIAALAELAHDAGAKVVVDNTFASPYLQQ- 192 (388)
T ss_pred EEEEeCC-------CCHHHHHHhcC--cCCeEEEE-ECCCCCccee---cCHHHHHHHHHHcCCEEEEECCCCccccCC-
Confidence 7776643 48899999887 56777777 8999999984 578899999999999999999987554321
Q ss_pred CchhHHHHHHHHcCCcEEEEEecCccccccC-CCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcC
Q 015435 229 DADAQSVRMFVADGGECLVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKD 307 (407)
Q Consensus 229 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 307 (407)
++ . ....++++|++|.++.+| .+.||+ +++++++.+++. ..........+...+..+...++.
T Consensus 193 -----p~----~-~gaDivv~S~sK~l~g~~~~~gG~v--v~~~~~l~~~~~----~~~~~~g~~~s~~~a~l~~~~L~t 256 (388)
T PRK07811 193 -----PL----A-LGADVVVHSTTKYIGGHSDVVGGAL--VTNDEELDEAFA----FLQNGAGAVPGPFDAYLTLRGLKT 256 (388)
T ss_pred -----ch----h-hCCcEEEecCceeecCCCCcEEEEE--EECCHHHHHHHH----HHHHhcCCCCCHHHHHHHHhccCc
Confidence 11 1 123489999999998655 456888 576665444432 222222223344443333333332
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CCC-----ccc----ccCCceeEEec-CCCHHHHHHhHhh
Q 015435 308 STMYKEWTLELKAMADRIISMRQQLFDALSARGT------PGD-----WSH----IIKQIGMFTFT-GLNSEQVAFMTKE 371 (407)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~-----~~~----~~~~~~~~~~~-~~~~~~~~~~l~~ 371 (407)
+..+.++..++...+.+.|++.+. |.. ++. ....||++.+. +-+.+.+.++++.
T Consensus 257 ----------l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~ 326 (388)
T PRK07811 257 ----------LAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARDFCAR 326 (388)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHh
Confidence 344555667788888888886642 110 000 01236666654 2234445555555
Q ss_pred ccEEE-cC--C--------------------------C--eEEecCCCCCChhHHHHHHHHHHH
Q 015435 372 YHIYM-TS--D--------------------------G--RISMAGLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 372 ~gi~~-~~--g--------------------------g--Ris~~~~~~e~i~~~~~~l~~~l~ 404 (407)
-.+.. .+ | + |||++- |+.+.+++-|.++|+
T Consensus 327 l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~ 387 (388)
T PRK07811 327 TKVFTLAESLGGVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGI---EDVADLLADLEQALG 387 (388)
T ss_pred CCcceeeccCCCCcceEeCCcccCcccCCHhhcCCCCCEEEEEeCC---CCHHHHHHHHHHHhh
Confidence 44422 11 1 1 888773 789999999988875
No 210
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.88 E-value=2.3e-20 Score=179.47 Aligned_cols=350 Identities=11% Similarity=0.059 Sum_probs=209.4
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccc--cCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVK--EYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
...+++++||..|....+.| ..++++++++.+++. ...... .| +.....++.+.+++...+ ..+.+++
T Consensus 38 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~-~~~~~~~~~~-~~~~~~~la~~l~~~~p~------~~~~v~f- 107 (423)
T PRK05964 38 LADGRELIDAISSWWVATHG-HNHPYIDQAIREQLD-RLDHVIFAGF-THEPAERLAQRLVALTPG------GLDHVFF- 107 (423)
T ss_pred eCCCCEEEEcchhHHhccCC-CCCHHHHHHHHHHHh-hCCCcccccc-CCHHHHHHHHHHHHhCCC------CCCEEEE-
Confidence 44678999999997655677 667788888888876 211111 12 222233455555554311 1268999
Q ss_pred ecCCcccHHHHHHHHHHhhc-----C-CCeEEecCCCCCChHHHHhhcCc-------------eeeEEEeecCCCCCcCh
Q 015435 105 QCLSGTGSLRVGAEFLARHY-----H-QLTIYIPQPTWGNHPKVFTLAGL-------------SVKTYRYYDPATRGLNF 165 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~-----~-gd~Vi~~~p~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~~~d~ 165 (407)
+++|++|++.++++.+... . ..+|+...-+|++........+. .+..++....+....++
T Consensus 108 -~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 186 (423)
T PRK05964 108 -SDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATL 186 (423)
T ss_pred -eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHH
Confidence 9999999999998887651 2 35788888888876543332111 12223321000001127
Q ss_pred hhHHHHHHcCCC-CcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCC
Q 015435 166 QGLLEDLRAAPS-GAIVLLHACAHNPTGVDP-TLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGG 243 (407)
Q Consensus 166 ~~l~~~i~~~~~-~~~v~i~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~ 243 (407)
+.+++.+.+.+. ..++++.+..++.+|... +.+.+++|.++|++||+++|+||++.+++..+ ..+....+ ....
T Consensus 187 ~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G---~~~a~~~~-~v~p 262 (423)
T PRK05964 187 DALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTG---TLFACEQA-GVSP 262 (423)
T ss_pred HHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---chhHHHhc-CCCC
Confidence 788888864333 345555332466677764 89999999999999999999999998887654 22222221 1112
Q ss_pred cEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHH--hhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHH
Q 015435 244 ECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQL--KLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAM 321 (407)
Q Consensus 244 ~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 321 (407)
+ +.+++|.++.+++++|++ +++ +++.+.+.... .......+++.+++++.++.+.++... -+.+
T Consensus 263 D---i~~~~K~l~gG~~p~~av--~~~-~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~--------~~~~ 328 (423)
T PRK05964 263 D---IMCLSKGLTGGYLPLAAT--LCT-AEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFE--------DEPV 328 (423)
T ss_pred C---eeeeehhhhcCcccceEE--EEc-HHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHH--------hcCH
Confidence 2 236789998544899998 454 54444332110 011112233567788887777766321 1234
Q ss_pred HHHHHHHHHHHHHHHHhcC-CCCCcccccCCceeEEe--cCCC----HHHHHHhHhhccEEEcCCC---eEEecC-CCCC
Q 015435 322 ADRIISMRQQLFDALSARG-TPGDWSHIIKQIGMFTF--TGLN----SEQVAFMTKEYHIYMTSDG---RISMAG-LSSK 390 (407)
Q Consensus 322 ~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~l~~~gi~~~~gg---Ris~~~-~~~e 390 (407)
.++++++.+++.+.|+++. .+ .+......|.++.+ .+-+ ...+...|.++||.+.+.+ ||+... ++++
T Consensus 329 ~~~~~~~g~~l~~~l~~l~~~~-~i~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~~~~~lR~~p~l~~t~e 407 (423)
T PRK05964 329 LERVAALSAGLAEGLEPFRDLP-GVADVRVLGAIGAVELDRPVLERDGPALRAFALERGVLLRPLGNTIYLMPPYIITAE 407 (423)
T ss_pred HHHHHHHHHHHHHHHHhhccCC-CeEEeecccEEEEEEeccCcchhHHHHHHHHHHHCCeEEEecCCEEEEeCCcccCHH
Confidence 4666667777777776652 11 12112233443322 1211 2334555566899998865 777552 5889
Q ss_pred ChhHHHHHHHHHHHhh
Q 015435 391 TVPHLTDAIHAAVTRM 406 (407)
Q Consensus 391 ~i~~~~~~l~~~l~~~ 406 (407)
|+++++++++++++++
T Consensus 408 dId~~v~~l~~al~~~ 423 (423)
T PRK05964 408 ELDRITDAIVEVADEL 423 (423)
T ss_pred HHHHHHHHHHHHHhhC
Confidence 9999999999999874
No 211
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.88 E-value=2.7e-20 Score=179.48 Aligned_cols=344 Identities=12% Similarity=0.099 Sum_probs=208.7
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccC--CCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEY--LPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
...++++||+..|....+.| ..++++++++.+++. ......+ .+.....++.+.+++...+. ..+.+++
T Consensus 52 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~--~~~~~~~~~~~~~~~~~la~~l~~~~p~~-----~~~~v~f- 122 (443)
T PRK06058 52 DVDGNRLIDLGSGIAVTSVG-NSAPRVVEAVREQVA--RFTHTCFMVTPYEGYVAVAEQLNRLTPGD-----HEKRSAL- 122 (443)
T ss_pred eCCCCEEEEcCcchhhhccC-CCCHHHHHHHHHHHH--hccCccccccCCHHHHHHHHHHHHhCCCC-----CCCEEEE-
Confidence 34678999999987655677 667788888888886 2111111 11122233444444433110 0147888
Q ss_pred ecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhc-C--------c-----eeeEEEeecCCCC----CcC--
Q 015435 105 QCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLA-G--------L-----SVKTYRYYDPATR----GLN-- 164 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~-G--------~-----~~~~v~~~~~~~~----~~d-- 164 (407)
+++|++|++.++++.+.....++|+....+|+++....... + . .+..+|...+.+. ..+
T Consensus 123 -~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (443)
T PRK06058 123 -FNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGE 201 (443)
T ss_pred -eCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchH
Confidence 99999999999988877766678999999998887544321 1 0 1222222111110 011
Q ss_pred ------hhhHHHHHHcCCCCcEEEEecCCCCCCC-CC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHH
Q 015435 165 ------FQGLLEDLRAAPSGAIVLLHACAHNPTG-VD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVR 236 (407)
Q Consensus 165 ------~~~l~~~i~~~~~~~~v~i~~~p~NPtG-~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~ 236 (407)
.+.+++.+. ++..+.++ ..|.++.| .. .+++.+++|.++|++||+++|+||++.+|+..+ ..+...
T Consensus 202 ~~~~~~~~~l~~~~~--~~~iAavi-~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG---~~fa~~ 275 (443)
T PRK06058 202 EAAARAITVIEKQVG--ADNLAAVI-IEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTG---AWFACE 275 (443)
T ss_pred HHHHHHHHHHHHhhC--CCceEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCh---hhhHHH
Confidence 112222222 23333333 45666654 43 568899999999999999999999999997654 223322
Q ss_pred HHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHH
Q 015435 237 MFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTL 316 (407)
Q Consensus 237 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 316 (407)
.+ .-..+++ +++|.++ .|+++|++ +++ +++.+.+.......+++.+++++.++.+.|+... +
T Consensus 276 ~~-gv~PDiv---~~gK~l~-~G~Pi~av--~~~-----~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~------~ 337 (443)
T PRK06058 276 HE-GIVPDLI---TTAKGIA-GGLPLSAV--TGR-----AEIMDAPHPGGLGGTYGGNPVACAAALAAIETIE------E 337 (443)
T ss_pred hc-CCCCCEE---EEccccc-CCCccEEE--EEc-----HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHH------H
Confidence 22 1122333 3589999 89999999 565 4444444433334566889999999998886321 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC-CCcccccCCceeEEec--CC-----CHHH---HHHhHhhccEEEcCCC-----
Q 015435 317 ELKAMADRIISMRQQLFDALSARGTP-GDWSHIIKQIGMFTFT--GL-----NSEQ---VAFMTKEYHIYMTSDG----- 380 (407)
Q Consensus 317 ~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~--~~-----~~~~---~~~~l~~~gi~~~~gg----- 380 (407)
+.+.++++++.+++.+.|+++... ..+.-+...|.++.+. .- +.+. +...+.++||.+.+++
T Consensus 338 --~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~ 415 (443)
T PRK06058 338 --DDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCGTYGNV 415 (443)
T ss_pred --cCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccCCCCCE
Confidence 245566777778888888765211 0122245566665432 11 1222 3333445899998753
Q ss_pred -eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 381 -RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 381 -Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
|+...- ++++++++++++|+++++++
T Consensus 416 lr~~Ppl~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 416 IRLLPPLVIGDELLREGLDVLEAALADL 443 (443)
T ss_pred EEEECCCccCHHHHHHHHHHHHHHHHhC
Confidence 664332 58899999999999999764
No 212
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.88 E-value=3e-20 Score=176.82 Aligned_cols=216 Identities=17% Similarity=0.123 Sum_probs=149.7
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChH----HHHhhcCce
Q 015435 74 IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHP----KVFTLAGLS 149 (407)
Q Consensus 74 ~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~----~~~~~~G~~ 149 (407)
......+++.++++. +. ++.++ ++||+.++.+++ ...+.+||+|+++.|.|.... ..+...|++
T Consensus 64 ~p~~~~le~~lA~l~-g~-------~~~i~--~~sG~~Al~~~l--~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~ 131 (403)
T PRK07503 64 NPTLALLEQRMASLE-GG-------EAAVA--LASGMGAITATL--WTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVT 131 (403)
T ss_pred CchHHHHHHHHHHHh-CC-------CcEEE--EcCHHHHHHHHH--HHHcCCCCEEEEccCccchHHHHHHHHHhhCCEE
Confidence 445888999999988 43 34566 788899999884 445789999999999987643 344578999
Q ss_pred eeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCC
Q 015435 150 VKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLD 229 (407)
Q Consensus 150 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~ 229 (407)
++.++. .|++++++.+. +++++|++ ++|+||||.+.+ +++|+++|+++|+++|+|++|+.....
T Consensus 132 v~~vd~-------~d~~~l~~~i~--~~tklV~l-e~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~--- 195 (403)
T PRK07503 132 VRHVDL-------TDPAALKAAIS--DKTRMVYF-ETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQ--- 195 (403)
T ss_pred EEEeCC-------CCHHHHHHhcC--ccCcEEEE-eCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC---
Confidence 888865 27889999887 56788777 899999999764 788888899999999999999754332
Q ss_pred chhHHHHHHHHcCCcEEEEEecCccccccC-CCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcCh
Q 015435 230 ADAQSVRMFVADGGECLVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDS 308 (407)
Q Consensus 230 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 308 (407)
. ++ . ....++++|+||.++.+| .+.|++ +.++++.+++... ..........+.+.+..+...|+.
T Consensus 196 -~--~l----~-~g~Di~v~S~tK~l~g~gd~~gG~v---~~~~~l~~~l~~~--~~~~~~g~~~s~~~a~l~l~~L~t- 261 (403)
T PRK07503 196 -R--PL----E-LGADLVVHSATKYLGGHGDITAGLV---VGGKALADRIRLE--GLKDMTGAVMSPFDAFLLMRGLKT- 261 (403)
T ss_pred -C--ch----h-hCCCEEEccccccccCCCceeEEEE---EcCHHHHHHHHhh--hHHhCcCCCCCHHHHHHHHcCcch-
Confidence 1 11 1 123488999999999776 566776 4556555544321 112222234555555544443332
Q ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015435 309 TMYKEWTLELKAMADRIISMRQQLFDALSARG 340 (407)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 340 (407)
+..+.++..++...+.+.|++.+
T Consensus 262 ---------l~~r~~~~~~na~~~a~~L~~~p 284 (403)
T PRK07503 262 ---------LALRMDRHCASAQAVAEWLARHP 284 (403)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHhCC
Confidence 34444555577778888887654
No 213
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.88 E-value=3.3e-20 Score=178.75 Aligned_cols=326 Identities=17% Similarity=0.214 Sum_probs=196.0
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhcccc--cc-ccCC-CCCCcHHH----HHHHHHHHhCCCCCCCCCCce
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQS--RV-KEYL-PIVGLVDF----NKLSAKLILGADSPAIKDNRV 101 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~y~-~~~g~~~l----~~~~a~~~~~~~~~~~~~~~i 101 (407)
.++.|+|..+. . |.++.+.+++...+..... .. ..|. ...-...+ ++.+++++ +.. ..+|
T Consensus 24 ~~~~~~l~~~~-----n-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~-g~~-----~~~i 91 (416)
T PRK00011 24 QEEHIELIASE-----N-FVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELF-GAE-----YANV 91 (416)
T ss_pred HhcCeeeeccc-----C-cCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh-CCC-----ceee
Confidence 36889999764 2 5565666655444320000 00 0110 01112222 33566655 431 2345
Q ss_pred EEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHH-----HHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCC
Q 015435 102 TTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPK-----VFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAP 176 (407)
Q Consensus 102 ~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~-----~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 176 (407)
++ + +||+++..++ ...+.+||+|+++.|+|..+.. .+...|++++.++++ ++++.+|++++++.+.+ .
T Consensus 92 ~~--~-sgt~al~~~l--~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~i~~-~ 164 (416)
T PRK00011 92 QP--H-SGSQANAAVY--FALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVD-EETGLIDYDEVEKLALE-H 164 (416)
T ss_pred ec--C-CchHHHHHHH--HHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcC-cccCCcCHHHHHHHHHh-c
Confidence 44 5 5678888874 4447899999999999976532 223456788888873 34578999999999973 2
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccc-cccCCCCCchhHHHHHHHHcCCcEEEEEecCccc
Q 015435 177 SGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQ-GFASGSLDADAQSVRMFVADGGECLVAQSYAKNM 255 (407)
Q Consensus 177 ~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 255 (407)
+++++++ ++++|| .. .++++|+++|+++|+++|+|++|. ++...+.. ... + . ...++++|++|.+
T Consensus 165 ~~k~v~~-~~~~~~--~~---~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~--~~~---~-~--~~di~~~S~~K~l 230 (416)
T PRK00011 165 KPKLIIA-GASAYS--RP---IDFKRFREIADEVGAYLMVDMAHIAGLVAAGVH--PSP---V-P--HADVVTTTTHKTL 230 (416)
T ss_pred CCCEEEE-CCCcCC--Cc---cCHHHHHHHHHHcCCEEEEECcchhcccccCcc--CCC---C-C--CCcEEEecCCcCC
Confidence 4566666 444544 32 358899999999999999999974 23222100 000 1 1 2347799999976
Q ss_pred cccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChh-HHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHH
Q 015435 256 GLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIH-GASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFD 334 (407)
Q Consensus 256 ~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (407)
+|.|.||+ +++++++.+++.. .......+.+.. .+.++..++... ..+.+++.+++++++++++.+
T Consensus 231 --~g~~gg~i--~~~~~~~~~~l~~----~~~~~~~~~~~~~~~aa~~~a~~~~-----~~~~~~~~~~~~~~~~~~l~~ 297 (416)
T PRK00011 231 --RGPRGGLI--LTNDEELAKKINS----AVFPGIQGGPLMHVIAAKAVAFKEA-----LEPEFKEYAQQVVKNAKALAE 297 (416)
T ss_pred --CCCCceEE--EeCCHHHHHHHHH----HhCccccCCccHHHHHHHHHHHHHH-----HhhhHHHHHHHHHHHHHHHHH
Confidence 68899999 6766665555433 222222222222 222222222111 113457778889999999999
Q ss_pred HHHhcCCCCCccccc-CCceeEEecCC-----CHHHHHHhHhhccEEEcCC-------------C-eEEec-----CCCC
Q 015435 335 ALSARGTPGDWSHII-KQIGMFTFTGL-----NSEQVAFMTKEYHIYMTSD-------------G-RISMA-----GLSS 389 (407)
Q Consensus 335 ~l~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~l~~~gi~~~~g-------------g-Ris~~-----~~~~ 389 (407)
.|++.| +.+.. ...+++.|+.+ +.+.+.+.|+++||.+..+ + |++.. ++++
T Consensus 298 ~L~~~g----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~ 373 (416)
T PRK00011 298 ALAERG----FRVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKE 373 (416)
T ss_pred HHHhCC----CeeeecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCH
Confidence 999887 44432 11235666544 4556777778899999731 2 77431 2468
Q ss_pred CChhHHHHHHHHHHHh
Q 015435 390 KTVPHLTDAIHAAVTR 405 (407)
Q Consensus 390 e~i~~~~~~l~~~l~~ 405 (407)
+|++++++.|++++..
T Consensus 374 ~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 374 AEMKEIAELIADVLDN 389 (416)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999998754
No 214
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=4.6e-20 Score=173.68 Aligned_cols=278 Identities=16% Similarity=0.117 Sum_probs=187.1
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHH----hhcCc
Q 015435 73 PIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVF----TLAGL 148 (407)
Q Consensus 73 ~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~----~~~G~ 148 (407)
+......|+++++++. +. +++++ ++|+++++.+++ ...+.+||+|+++.|+|......+ ...|+
T Consensus 51 ~npt~~~Le~~lA~le-g~-------e~ivv--t~gg~~Ai~~~l--~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi 118 (388)
T PRK08861 51 GNPNRGLLEQTLSELE-SG-------KGAVV--TNCGTSALNLWV--SALLGPDDLIVAPHDCYGGTYRLFNTRANKGDF 118 (388)
T ss_pred CCchHHHHHHHHHHHh-CC-------CeEEE--ECCHHHHHHHHH--HHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCe
Confidence 4556889999999988 42 78999 999999999994 445789999999999998654433 23467
Q ss_pred eeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCC
Q 015435 149 SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSL 228 (407)
Q Consensus 149 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~ 228 (407)
+++.++. .|++++++++. ++++++++ ++|+||||.+++ +++|+++|+++|+++|+|++|.......
T Consensus 119 ~v~~vd~-------~d~e~l~~~i~--~~tklV~l-esP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~~- 184 (388)
T PRK08861 119 KVQFVDQ-------SDAAALDAALA--KKPKLILL-ETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQK- 184 (388)
T ss_pred EEEEECC-------CCHHHHHHhcC--cCCeEEEE-ECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccCC-
Confidence 7777642 48899998887 56788777 899999999887 5677788999999999999997544321
Q ss_pred CchhHHHHHHHHcCCcEEEEEecCccccccC-CCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcC
Q 015435 229 DADAQSVRMFVADGGECLVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKD 307 (407)
Q Consensus 229 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 307 (407)
++ . ....++++|++|.++.++ ...|++ ++.++++.++ +...........++.....+...++.
T Consensus 185 -----pl----~-~GaDivv~S~tK~l~G~~d~~gG~i--~~~~~~~~~~----~~~~~~~~G~~~~p~~a~l~~rgl~T 248 (388)
T PRK08861 185 -----PL----E-LGADFVIHSTTKYINGHSDVIGGVL--ITKTKEHAEE----LAWWGNCIGATGTPFDSYMTLRGIRT 248 (388)
T ss_pred -----Cc----c-cCCCEEEeecceeccCCCcceeEEE--EecHHHHHHH----HHHHHhccCCCCChHHHHHHHhcCCC
Confidence 11 1 123589999999987543 567877 5665554433 33333333345566666666555554
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CCCc-----c----cccCCceeEEec-CCCHHHHHHhHhh
Q 015435 308 STMYKEWTLELKAMADRIISMRQQLFDALSARGT------PGDW-----S----HIIKQIGMFTFT-GLNSEQVAFMTKE 371 (407)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~~-----~----~~~~~~~~~~~~-~~~~~~~~~~l~~ 371 (407)
. ..+.++..++...+.+.|+..+. |..- . ....-||++.|. +-+.+.+.++++.
T Consensus 249 l----------~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~~f~~~ 318 (388)
T PRK08861 249 L----------GARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLKVFVKA 318 (388)
T ss_pred H----------HHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHHHHHhc
Confidence 3 44556667778888888887642 1100 0 011246666544 2244555556555
Q ss_pred ccEEE---cCC-------------------------C------eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 372 YHIYM---TSD-------------------------G------RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 372 ~gi~~---~~g-------------------------g------Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
-.+.. .=| | |+|++- |+.+.+++-|+++|+.
T Consensus 319 l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl---E~~~dli~Dl~~al~~ 383 (388)
T PRK08861 319 LALFSLAESLGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVGL---EDAQDLIADLDQAFAK 383 (388)
T ss_pred CCcceEccCCCCCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHHH
Confidence 44322 111 1 888873 7889999999988865
No 215
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=7e-20 Score=173.11 Aligned_cols=276 Identities=17% Similarity=0.159 Sum_probs=183.7
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHh---hcCcee
Q 015435 74 IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFT---LAGLSV 150 (407)
Q Consensus 74 ~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~---~~G~~~ 150 (407)
.....++++.+++++ +. +++++ ++||++|+..++ ...+.+||+|+++.|.|..+...++ ..|+++
T Consensus 52 np~~~~lE~~lA~l~-g~-------~~~l~--~~sG~~Ai~~~l--~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v 119 (385)
T PRK08574 52 NPTLRPLEEALAKLE-GG-------VDALA--FNSGMAAISTLF--FSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKV 119 (385)
T ss_pred CccHHHHHHHHHHHh-CC-------CcEEE--eCCHHHHHHHHH--HHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEE
Confidence 456889999999998 53 57888 999999999884 5558899999999999999877664 456666
Q ss_pred eEEEeecCCCCCcChhhHHHHHHcCC-CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCC
Q 015435 151 KTYRYYDPATRGLNFQGLLEDLRAAP-SGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLD 229 (407)
Q Consensus 151 ~~v~~~~~~~~~~d~~~l~~~i~~~~-~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~ 229 (407)
+.++ +|++++++++. + +++++++ ++|+||||.+++ +++|+++|+++|+++|+|++|+.....
T Consensus 120 ~~~~--------~d~~~l~~~i~--~~~tklV~i-e~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~~--- 182 (385)
T PRK08574 120 VLAY--------PSTEDIIEAIK--EGRTKLVFI-ETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLLY--- 182 (385)
T ss_pred EEEC--------CCHHHHHHhcC--ccCceEEEE-ECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccC---
Confidence 5542 36788998887 4 5777776 999999999886 678888899999999999998533221
Q ss_pred chhHHHHHHHHcCCcEEEEEecCccccccCCCc-ceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcCh
Q 015435 230 ADAQSVRMFVADGGECLVAQSYAKNMGLYGERV-GALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDS 308 (407)
Q Consensus 230 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 308 (407)
. ++ . .+..+++.|++|.++.+|..+ |++ ++.++++.++++. .........+......+...++.
T Consensus 183 -~--~l----~-~GaDivv~S~sK~l~g~~d~~gG~v--i~~~~~~~~~~~~----~~~~~g~~~~p~~a~l~l~~l~t- 247 (385)
T PRK08574 183 -R--PL----R-HGADFVVHSLTKYIAGHNDVVGGVA--VAWSGEFLEELWE----WRRRLGTIMQPFEAYLVLRGLKT- 247 (385)
T ss_pred -C--hh----h-hCCcEEEeeCceeecCCCCceeEEE--EECcHHHHHHHHH----HHHhcCCCCCHHHHHHHHcccCc-
Confidence 1 11 1 234688999999998777665 556 5666665554433 22222334444444444433332
Q ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CCCccc---------cc--CCceeEEec-CCCHHHHHHhHh
Q 015435 309 TMYKEWTLELKAMADRIISMRQQLFDALSARGT------PGDWSH---------II--KQIGMFTFT-GLNSEQVAFMTK 370 (407)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~~~~---------~~--~~~~~~~~~-~~~~~~~~~~l~ 370 (407)
+....++..++...+.+.|++.+. |..-+. .. ..||++.+. .-+.+.+.++++
T Consensus 248 ---------L~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~ 318 (385)
T PRK08574 248 ---------LEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGGRDAVLKFLR 318 (385)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCCHHHHHHHHH
Confidence 344555566677888888876542 110000 01 135555543 224555666666
Q ss_pred hccEEE-cC--C-------------------------C------eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 371 EYHIYM-TS--D-------------------------G------RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 371 ~~gi~~-~~--g-------------------------g------Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
+-.+.. .+ | | |||++- |+.+.+++-|.++++.
T Consensus 319 ~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dli~dl~~al~~ 384 (385)
T PRK08574 319 SLKLIKPSPSLGGVESLATYPVKSAASPIPEEDRKALGITEDLVRLSVGL---EDVEDLIEDLDQALGS 384 (385)
T ss_pred cCCcceEccCCCCCcceeeCCCcCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhc
Confidence 544432 11 1 1 888873 7899999999998864
No 216
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.88 E-value=3.2e-20 Score=175.90 Aligned_cols=303 Identities=14% Similarity=0.109 Sum_probs=192.9
Q ss_pred cchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHh-hcCCCe
Q 015435 50 VLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLAR-HYHQLT 128 (407)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~-~~~gd~ 128 (407)
..+..+++.+.+. .. ... +.....+|++++++++ +. +++++ |+|||+|+.+++ ... +.+||+
T Consensus 13 ~~~e~~~~~~~l~--~~-~~~--~g~~~~~le~~la~~~-g~-------~~~v~--~~sgt~al~lal--~al~~~~Gd~ 75 (379)
T PRK11658 13 GDEELAAVKEVLR--SG-WIT--TGPKNQALEQAFCQLT-GN-------QHAIA--VSSATAGMHITL--MALGIGPGDE 75 (379)
T ss_pred CHHHHHHHHHHHH--cC-Ccc--CCHhHHHHHHHHHHHh-CC-------CeEEE--ECCHHHHHHHHH--HHcCCCCCCE
Confidence 3455556656554 21 222 2345789999999988 54 56788 999999999984 444 579999
Q ss_pred EEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHH
Q 015435 129 IYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMR 208 (407)
Q Consensus 129 Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~ 208 (407)
|++++++|..+...+...|++++.+++ +++++.+|++++++.+. +++++++ |.||+|... ++++|+++|+
T Consensus 76 Viv~~~~~~~~~~~~~~~G~~~v~vd~-~~~~~~~d~~~l~~~i~--~~tkav~----~~~~~G~~~---d~~~i~~~a~ 145 (379)
T PRK11658 76 VITPSLTWVSTLNMIVLLGATPVMVDV-DRDTLMVTPEAIEAAIT--PRTKAII----PVHYAGAPA---DLDAIRAIGE 145 (379)
T ss_pred EEECCCcHHHHHHHHHHcCCEEEEEec-CCCcCCcCHHHHHHhcc--cCCeEEE----EeCCCCCcC---CHHHHHHHHH
Confidence 999999999999999999999999998 35556789999999987 5667665 356899954 5788888999
Q ss_pred HcCceeeecccccc-ccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhh
Q 015435 209 SKGLLPFFDSAYQG-FASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIR 287 (407)
Q Consensus 209 ~~~~~li~D~~y~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~ 287 (407)
++|+++|+|++++. ..+.+. . ....+. .+.||++...+++.+.|++ ++.++++.+++.........
T Consensus 146 ~~gi~vi~D~a~a~g~~~~~~-----~---~g~~g~---~~~Sf~~~K~l~~g~GG~v--~~~~~~~~~~~~~~~~~G~~ 212 (379)
T PRK11658 146 RYGIPVIEDAAHAVGTYYKGR-----H---IGARGT---AIFSFHAIKNITCAEGGLV--VTDDDELADRLRSLKFHGLG 212 (379)
T ss_pred HcCCeEEEECCCccCCeECCe-----e---cCCCCC---EEEeCCCCCcCcccCceEE--EECCHHHHHHHHHHHHcCCC
Confidence 99999999999863 333321 0 111122 4556665545566677887 67888877766542211100
Q ss_pred c------------------ccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc
Q 015435 288 P------------------MYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHII 349 (407)
Q Consensus 288 ~------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 349 (407)
. ...+.......++....+. +.+++..++-+++.+.+.+.|++++. ..+..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql--------~~l~~~~~~r~~~a~~~~~~L~~~~~---~~~~~ 281 (379)
T PRK11658 213 VDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQL--------AKLEALNARRREIAARYLQALADLPF---QPLSL 281 (379)
T ss_pred cchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHhcCCCC---ccCcC
Confidence 0 0001111122233322221 33556666666777777888876652 11111
Q ss_pred C----CceeEEe---c-----CCCHHHHHHhHhhccEEEcC----------------CC----------e-EEec---CC
Q 015435 350 K----QIGMFTF---T-----GLNSEQVAFMTKEYHIYMTS----------------DG----------R-ISMA---GL 387 (407)
Q Consensus 350 ~----~~~~~~~---~-----~~~~~~~~~~l~~~gi~~~~----------------gg----------R-is~~---~~ 387 (407)
+ ...++.+ + +.+.+.+.+.|+++||.+.. .+ | +++. .+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l 361 (379)
T PRK11658 282 PAWPHQHAWHLFIIRVDEERCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDM 361 (379)
T ss_pred CCCCCceeEEEEEEEECCccccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCC
Confidence 1 1122222 2 23567777777778987642 01 3 2322 26
Q ss_pred CCCChhHHHHHHHHHH
Q 015435 388 SSKTVPHLTDAIHAAV 403 (407)
Q Consensus 388 ~~e~i~~~~~~l~~~l 403 (407)
++++++++++.|++++
T Consensus 362 ~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 362 TDADVDRVITALQQIA 377 (379)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 7788999999998865
No 217
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.88 E-value=4.6e-20 Score=174.63 Aligned_cols=216 Identities=16% Similarity=0.210 Sum_probs=150.9
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChH----HHHhhcCc
Q 015435 73 PIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHP----KVFTLAGL 148 (407)
Q Consensus 73 ~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~----~~~~~~G~ 148 (407)
+.....++++.+++++ +. +++++ ++||++++.+++ ...+.+||+|+++.+.|.+.. ..+...|.
T Consensus 52 ~~p~~~~le~~la~l~-g~-------~~~~~--~~sG~~Ai~~al--~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~ 119 (380)
T TIGR01325 52 ANPTVAAFEERIAALE-GA-------ERAVA--TATGMSAIQAAL--MTLLQAGDHVVASRSLFGSTVGFISEILPRFGI 119 (380)
T ss_pred CCchHHHHHHHHHHHh-CC-------CcEEE--ECCHHHHHHHHH--HHHhCCCCEEEEecCCcchHHHHHHHHHHHhCC
Confidence 3445788999999987 53 56788 999999999984 444789999999998887643 34567899
Q ss_pred eeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCC
Q 015435 149 SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSL 228 (407)
Q Consensus 149 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~ 228 (407)
+++.++. .|++++++.+. ++++++++ .+|+||+|.+. ++++|+++|+++|+++|+|++|.......
T Consensus 120 ~v~~v~~-------~d~~~l~~~i~--~~tklV~l-e~p~np~g~~~---dl~~I~~la~~~gi~livD~a~~~~~~~~- 185 (380)
T TIGR01325 120 EVSFVDP-------TDLNAWEAAVK--PNTKLVFV-ETPSNPLGELV---DIAALAELAHAIGALLVVDNVFATPVLQQ- 185 (380)
T ss_pred EEEEECC-------CCHHHHHHhcC--CCceEEEE-ECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 9888865 26888888886 56777777 89999999976 57888888999999999999987554321
Q ss_pred CchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcCh
Q 015435 229 DADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDS 308 (407)
Q Consensus 229 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 308 (407)
++ . ....+++.|+||.++.+|.++|.+ ++.+++..+.+.. .........+...+..+ ++..
T Consensus 186 -----pl----~-~g~Divv~S~sK~l~g~g~~~gG~--vv~~~~~~~~l~~----~~~~~g~~~~p~~a~~~---l~~l 246 (380)
T TIGR01325 186 -----PL----K-LGADVVVYSATKHIDGQGRVMGGV--IAGSEELMAEVAV----YLRHTGPAMSPFNAWVL---LKGL 246 (380)
T ss_pred -----ch----h-hCCCEEEeeccceecCCCCeEEEE--EEeCHHHHHHHHH----HHHhhCCCCCHHHHHHH---Hhcc
Confidence 11 1 123578889999999888887554 2444554444333 32222223333333333 3322
Q ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015435 309 TMYKEWTLELKAMADRIISMRQQLFDALSARG 340 (407)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 340 (407)
+.+..+.++..+++..+.+.|++.+
T Consensus 247 -------~tl~~r~~~~~~~a~~la~~L~~~p 271 (380)
T TIGR01325 247 -------ETLSLRMQKQFDSALAIAEWLQAQP 271 (380)
T ss_pred -------CcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 2344556677788888888888765
No 218
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.88 E-value=6.7e-20 Score=173.38 Aligned_cols=324 Identities=15% Similarity=0.138 Sum_probs=202.9
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhcccccc-ccCCCCCC----cHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRV-KEYLPIVG----LVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~y~~~~g----~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
.+++++|+...| .|....+.+.+++.+.+. ..+.. .+-.-..| +.++.+++++++ +. +..++
T Consensus 101 ~r~~l~FsSndY---LGL~~~p~v~~a~~~ai~-~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~-g~-------e~all- 167 (476)
T PLN02955 101 FKKLLLFSGNDY---LGLSSHPTISNAAANAAK-EYGMGPKGSALICGYTTYHRLLESSLADLK-KK-------EDCLV- 167 (476)
T ss_pred CceEEEeeccCc---cCCCCCHHHHHHHHHHHH-HcCCCCCCcCccccChHHHHHHHHHHHHHH-CC-------CcEEE-
Confidence 358899999988 676667777777777775 11111 00001233 478999999988 54 67777
Q ss_pred ecCCcccHHHHHHHHHHh------------hcCCCeEEecCCCCCChHHHHhhc----CceeeEEEeecCCCCCcChhhH
Q 015435 105 QCLSGTGSLRVGAEFLAR------------HYHQLTIYIPQPTWGNHPKVFTLA----GLSVKTYRYYDPATRGLNFQGL 168 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~------------~~~gd~Vi~~~p~y~~~~~~~~~~----G~~~~~v~~~~~~~~~~d~~~l 168 (407)
.++|..|...++..+.. ..++|.|++..-.|.+..+.++.. +.+++.++. .|++.|
T Consensus 168 -~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-------ND~~~L 239 (476)
T PLN02955 168 -CPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-------CDMYHL 239 (476)
T ss_pred -ECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCC-------CCHHHH
Confidence 88888877776433310 124456777677888888888766 466766655 378899
Q ss_pred HHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEE
Q 015435 169 LEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVA 248 (407)
Q Consensus 169 ~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 248 (407)
++.+.+.+....++++....++.|.+.+ +++|.++|++||++||+||+|..+..+..... ....+.-..+..+++
T Consensus 240 e~~L~~~~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G--~~e~~g~~~di~ii~ 314 (476)
T PLN02955 240 NSLLSSCKMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGG--VAEEFNCEADVDLCV 314 (476)
T ss_pred HHHHHhCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCc--HHHHhCCCCCCcEEE
Confidence 9888654443444554666888899776 77777779999999999999987776531111 112222235778999
Q ss_pred EecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcc-cCCC-ChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHH
Q 015435 249 QSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPM-YSSP-PIHGASIVATILKDSTMYKEWTLELKAMADRII 326 (407)
Q Consensus 249 ~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (407)
+||||.+|..| |++ +++ +++.+ .+....+.. ++++ ++....++.+.++.. ..-..+++++.
T Consensus 315 ~TLsKA~G~~G---Gfi--~gs-~~~~~----~l~~~~~~~ifStalpp~~aaa~laal~l~-------~~~~~~r~~L~ 377 (476)
T PLN02955 315 GTLSKAAGCHG---GFI--ACS-KKWKQ----LIQSRGRSFIFSTAIPVPMAAAAYAAVVVA-------RKEKWRRKAIW 377 (476)
T ss_pred EeCccchhccC---cee--ecH-HHHHH----HHHHhCCCCeecccccHHHHHHHHHHHHHH-------hcCHHHHHHHH
Confidence 99999987665 887 454 44444 343332222 2222 322333343344321 11124667788
Q ss_pred HHHHHHHHHHHhcCCCCCcccccCCceeEE-ecCCCHH--HHHHhHhhccEEEcCC-------C----eEEecC-CCCCC
Q 015435 327 SMRQQLFDALSARGTPGDWSHIIKQIGMFT-FTGLNSE--QVAFMTKEYHIYMTSD-------G----RISMAG-LSSKT 391 (407)
Q Consensus 327 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~l~~~gi~~~~g-------g----Ris~~~-~~~e~ 391 (407)
++.+++.+. .| +... ..++. +++-... .+.+.|.++||.+.+. | ||++.. ++++|
T Consensus 378 ~n~~~fr~~---~G----~~~~---sPI~pI~ig~~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~ed 447 (476)
T PLN02955 378 ERVKEFKAL---SG----VDIS---SPIISLVVGNQEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTED 447 (476)
T ss_pred HHHHHHHHh---cC----CCCC---CCEEEEEeCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHH
Confidence 888888873 34 3321 23332 2333222 2445566689998642 2 888764 68899
Q ss_pred hhHHHHHHHHHHHhh
Q 015435 392 VPHLTDAIHAAVTRM 406 (407)
Q Consensus 392 i~~~~~~l~~~l~~~ 406 (407)
|+++++.|.++.+.+
T Consensus 448 Id~lv~~L~~~~~~~ 462 (476)
T PLN02955 448 VKKLITALSSCLDFD 462 (476)
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999999887654
No 219
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.88 E-value=2.3e-20 Score=178.28 Aligned_cols=348 Identities=13% Similarity=0.079 Sum_probs=204.8
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccC-CCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEY-LPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y-~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
...++++||+..|....+.| ..++++++++.+++. .....+.. .......++.+++++.+...... .+.+.+ .
T Consensus 31 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~-~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~---~~~~~f-~ 104 (412)
T TIGR02407 31 DEDGKEYIDFFAGAGALNYG-HNNPKLKQALIDYLA-DDGIIHSLDMATEAKREFLETFNEIILKPRGL---DYKVQF-P 104 (412)
T ss_pred eCCCCEEEEcccchhhccCC-CCCHHHHHHHHHHHh-hccceeccccCcHHHHHHHHHHHHhccCccCC---CceEEE-e
Confidence 34678999999997655667 667788888888875 11111111 01112233444444433111101 124545 0
Q ss_pred cCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhc-C------------ceeeEEEeecCCCC-CcChhhHHHH
Q 015435 106 CLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLA-G------------LSVKTYRYYDPATR-GLNFQGLLED 171 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~-G------------~~~~~v~~~~~~~~-~~d~~~l~~~ 171 (407)
++||++|++.++++.+......+|+...-+|++........ | ..+..+|..+.... .-+++.+++.
T Consensus 105 ~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~ 184 (412)
T TIGR02407 105 GPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKL 184 (412)
T ss_pred CCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHH
Confidence 58999999999988877655568999898888776543321 1 12233332110000 0236667777
Q ss_pred HHcCC----CCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEE
Q 015435 172 LRAAP----SGAIVLLHACAHNPTGV-DPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECL 246 (407)
Q Consensus 172 i~~~~----~~~~v~i~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i 246 (407)
+.+.. +..++++ ...++++|. .++.+.+++|.++|++||+++|+||++.+|+..+ ..+....+.- ..+
T Consensus 185 ~~~~~~~~~~~aavi~-Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG---~~~a~~~~~v-~PD-- 257 (412)
T TIGR02407 185 LEDSSSGVDLPAAVIL-ETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTG---TFFSFEPAGI-EPD-- 257 (412)
T ss_pred HHhccCCCCceEEEEe-ccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hhHHhcccCC-CCC--
Confidence 76321 2345555 556778888 5899999999999999999999999999887654 2222222211 122
Q ss_pred EEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcC-hhhHHhHHHHHHHHHHHH
Q 015435 247 VAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKD-STMYKEWTLELKAMADRI 325 (407)
Q Consensus 247 ~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~ 325 (407)
+.+++|.++..|+|+|++ +++ ++ + ..+.......+++.+++++.++.+.++. .. -.+..+++
T Consensus 258 -i~~~~K~lg~~G~pigav--~~~-~~----~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~--------~~~l~~~~ 320 (412)
T TIGR02407 258 -IVCLSKSISGYGLPLALT--LIK-PE----L-DVWKPGEHNGTFRGNNLAFVTATAALEYYWS--------DDAFEKAV 320 (412)
T ss_pred -EEEechhccCCccceeEE--EEc-hh----h-hccCCCccCCCCCccHHHHHHHHHHHHHHhc--------ccHHHHHH
Confidence 235789998339999999 565 22 2 2222222334456677766665555542 11 01233444
Q ss_pred HHHHHHHHHHHHhcC--CCCCcccccCCceeEEecCCCH----HHHHHhHhhccEEEcCCC------eEEecC-CCCCCh
Q 015435 326 ISMRQQLFDALSARG--TPGDWSHIIKQIGMFTFTGLNS----EQVAFMTKEYHIYMTSDG------RISMAG-LSSKTV 392 (407)
Q Consensus 326 ~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~gi~~~~gg------Ris~~~-~~~e~i 392 (407)
+++.+++.+.++.+- .+. ........|++.|+.+.. ..+...+.++||.+.+.+ ||+..- ++++++
T Consensus 321 ~~~g~~l~~~l~~l~~~~~~-~~~~vrg~Gl~~~l~l~~~~~~~~~~~~~~~~Gv~v~~~~~~~~~lr~~p~l~~t~~~i 399 (412)
T TIGR02407 321 QRKSEIIQERLDRIVAEYPE-LIKQVRGRGLMQGIECGDGDLAGKIAKAAFENGLIIETSGPNDEVIKLLPPLTIDEETL 399 (412)
T ss_pred HHHHHHHHHHHHHHHhhCCC-ceEeeecceeEEEEEecChHHHHHHHHHHHHCCCEEeccCCCCCEEEEECCCCCCHHHH
Confidence 445555555544321 000 112234457787876632 234455566899997643 776553 588999
Q ss_pred hHHHHHHHHHHHh
Q 015435 393 PHLTDAIHAAVTR 405 (407)
Q Consensus 393 ~~~~~~l~~~l~~ 405 (407)
++++++|.+++++
T Consensus 400 ~~~~~~l~~~l~~ 412 (412)
T TIGR02407 400 QQGLDILEQAVEE 412 (412)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998864
No 220
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.88 E-value=1.1e-19 Score=172.43 Aligned_cols=278 Identities=14% Similarity=0.150 Sum_probs=182.6
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHH----HHhhcCc
Q 015435 73 PIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPK----VFTLAGL 148 (407)
Q Consensus 73 ~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~----~~~~~G~ 148 (407)
+.....+|++.++++. +. +++++ ++||++|+.+++ ...+.+||+|++++|+|..+.. .+...|+
T Consensus 63 ~~pt~~~Le~~lA~l~-g~-------~~~l~--~~sgt~Ai~~~l--~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi 130 (394)
T PRK07050 63 ATPTSLALAQRLAEIE-GG-------RHALL--QPSGLAAISLVY--FGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGI 130 (394)
T ss_pred CCHHHHHHHHHHHHHh-CC-------CeEEE--eccHHHHHHHHH--HHHhCCCCEEEEecCCcccHHHHHHHHHHhcCe
Confidence 3455788888888877 43 68999 999999999995 4448899999999999998764 4457799
Q ss_pred eeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCC
Q 015435 149 SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSL 228 (407)
Q Consensus 149 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~ 228 (407)
+++.++.. +.+++++.+. +++++|++ ++|+||||. ..++++|+++|+++|+++|+|++|.....-
T Consensus 131 ~v~~vd~~-------~~~~l~~~i~--~~tklV~l-e~p~Np~~~---~~di~~I~~ia~~~gi~livD~a~a~~~~~-- 195 (394)
T PRK07050 131 TVRFYDPL-------IGAGIADLIQ--PNTRLIWL-EAPGSVTME---VPDVPAITAAARARGVVTAIDNTYSAGLAF-- 195 (394)
T ss_pred EEEEECCC-------CHHHHHHhcC--CCCeEEEE-ECCCCCCcc---HhhHHHHHHHHHHcCCEEEEECCccccccc--
Confidence 88887531 3467888876 67788777 899999976 789999999999999999999998654321
Q ss_pred CchhHHHHHHHHcCCcEEEEEecCccccc-cCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcC
Q 015435 229 DADAQSVRMFVADGGECLVAQSYAKNMGL-YGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKD 307 (407)
Q Consensus 229 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 307 (407)
. +. . ....+++.|++|.++. .+.+.|++ ++.++++.+++. ........+.++.....+...+++
T Consensus 196 --~--~l----~-~GaDi~v~S~tK~~~g~~~~~gG~v--~~~~~~~~~~~~----~~~~~~G~~~~~~~a~l~lr~l~t 260 (394)
T PRK07050 196 --K--PF----E-HGVDISVQALTKYQSGGSDVLMGAT--ITADAELHAKLK----LARMRLGIGVSADDCSLVLRGLPS 260 (394)
T ss_pred --C--HH----H-cCCeEEEEECCceecCCCCeeEEEE--EECCHHHHHHHH----HHHHhcCCCCCHHHHHHHHcCCCc
Confidence 0 11 1 1246889999999973 33467888 577766555443 333333335555555555444443
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CCC-----ccc----ccCCceeEEec-CC--CHHHHHHhH
Q 015435 308 STMYKEWTLELKAMADRIISMRQQLFDALSARGT------PGD-----WSH----IIKQIGMFTFT-GL--NSEQVAFMT 369 (407)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~-----~~~----~~~~~~~~~~~-~~--~~~~~~~~l 369 (407)
. ..+.++..++...+.+.|++.+. |.. +.. ....+++|.+. .. +.+.+.+++
T Consensus 261 l----------~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~ 330 (394)
T PRK07050 261 L----------QVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFV 330 (394)
T ss_pred H----------HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHH
Confidence 2 33445555666677777776531 110 000 01235555544 22 334343333
Q ss_pred ---hhccEEEcCC-----------------------C--eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 370 ---KEYHIYMTSD-----------------------G--RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 370 ---~~~gi~~~~g-----------------------g--Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
+..++.+.=| + |||++- |+.+.+++-|.++|+.
T Consensus 331 ~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGl---E~~~dl~~dl~~al~~ 391 (394)
T PRK07050 331 EALELFAIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGL---EDEADLIADLEQALEA 391 (394)
T ss_pred HcCCCCeeccccCCccceEeeCcccccchhhcCCCCCEEEEEeCc---CCHHHHHHHHHHHHHH
Confidence 3334322211 2 788773 8899999999998875
No 221
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.87 E-value=4.8e-20 Score=174.53 Aligned_cols=327 Identities=13% Similarity=0.053 Sum_probs=190.5
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhcccc-----ccccCC------CCCCcHHHHHHHHHHHhCCCCCCCCC
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQS-----RVKEYL------PIVGLVDFNKLSAKLILGADSPAIKD 98 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~y~------~~~g~~~l~~~~a~~~~~~~~~~~~~ 98 (407)
..+.|||++..|. +....+++.+++.+.+.+-.. ..+..+ ...-+.++++.+++++ +..
T Consensus 3 ~~~~~~~~s~~YL---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~-~~~------ 72 (370)
T PRK05937 3 ESLSIDFVTNDFL---GFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFH-GAP------ 72 (370)
T ss_pred CCceEEeECCCcc---CCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHh-CCC------
Confidence 3679999999984 444556666666666641100 011111 1223788899999988 431
Q ss_pred CceEEeecCCcccHHHHHHHHHHhh-cCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC--
Q 015435 99 NRVTTVQCLSGTGSLRVGAEFLARH-YHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA-- 175 (407)
Q Consensus 99 ~~i~~~~t~g~t~a~~~~~~~~~~~-~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~-- 175 (407)
+.+++ ++|. .++..+ ...+ .+||.|++..-.|......+.......+.++. .|++++++.+.+.
T Consensus 73 ~~l~~--~sG~-~a~~~~---~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~ 139 (370)
T PRK05937 73 EAFIV--PSGY-MANLGL---CAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFRH-------NDLDHLESLLESCRQ 139 (370)
T ss_pred eEEEE--CChH-HHHHHH---HHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHhhhc
Confidence 33444 5544 555433 2233 46777777777777777776654433333322 5889999988632
Q ss_pred -CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCcc
Q 015435 176 -PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKN 254 (407)
Q Consensus 176 -~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 254 (407)
+++..++++++++|+||.+.+ +++|+++|+++|+++++|++|+....+ .+.... ...+ ...+..+.+.||||.
T Consensus 140 ~~~~~~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g-~~g~g~-~~~~-~~~~~~~~~~tlsK~ 213 (370)
T PRK05937 140 RSFGRIFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFG-DDGKGF-CHSL-GYENFYAVLVTYSKA 213 (370)
T ss_pred cCCCcEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccC-CCCCch-HHhh-CCCCCcEEEEechhh
Confidence 123334444899999999886 778888899999999999999753332 111111 1111 112233678999999
Q ss_pred ccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHH
Q 015435 255 MGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFD 334 (407)
Q Consensus 255 ~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (407)
+|..|. | + +.. ++..+.+........ ...+.+.....++..+++-. .+..+..++++++.++++.+
T Consensus 214 ~g~~G~--~-v--l~~-~~~~~~~~~~~~~~~--~s~~~~~~~~~a~~aal~~l------~~~~~~~~~~l~~l~~~l~~ 279 (370)
T PRK05937 214 LGSMGA--A-L--LSS-SEVKQDLMLNSPPLR--YSTGLPPHLLISIQVAYDFL------SQEGELARKQLFRLKEYFAQ 279 (370)
T ss_pred hhcCce--E-E--EcC-HHHHHHHHHhCCCCe--ecCCCCHHHHHHHHHHHHHH------HhCcHHHHHHHHHHHHHHHH
Confidence 987663 2 3 243 333333332111111 11234444444444444311 11123456777888888887
Q ss_pred HHHhcCCCCCcccccCCceeEEecCCCHHHHHHhHhhccEEEcCC-----C--eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 335 ALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSD-----G--RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 335 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~g-----g--Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
.+...+. .... .+.+.+...+.+.+.|+++||.+... + |+++.. .+++|++++++.|+++++++
T Consensus 280 ~l~~~~~----~~~~----~i~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~ 351 (370)
T PRK05937 280 KFSSAAP----GCVQ----PIFLPGISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKY 351 (370)
T ss_pred hcCCCCC----CCEE----EEEeCChhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHh
Confidence 7754321 1011 12223445556667777789988632 2 999864 48899999999999998765
Q ss_pred C
Q 015435 407 G 407 (407)
Q Consensus 407 ~ 407 (407)
|
T Consensus 352 ~ 352 (370)
T PRK05937 352 Q 352 (370)
T ss_pred C
Confidence 3
No 222
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.87 E-value=7.4e-20 Score=176.28 Aligned_cols=347 Identities=12% Similarity=0.027 Sum_probs=210.2
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhcccccccc-CCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKE-YLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
...++++||+..|....+.| ..++++++++.+++. .....+. +.+.....++.+++++...+ ... ...-+++
T Consensus 35 D~dG~~ylD~~~g~~~~~lG-h~~p~i~~ai~~q~~-~~~~~~~~~~~~~~~~~lae~L~~~~p~-~~~--~~~~~f~-- 107 (442)
T TIGR00709 35 DVEGKEYLDFLAGAGTLALG-HNHPNMKQKILDYLQ-SGLPLHTLDLTTPLKDAFIEALLNIIPK-RKM--DYKLQFP-- 107 (442)
T ss_pred eCCCCEEEEccccHhhhcCC-CCCHHHHHHHHHHHH-hccCccccccCcHHHHHHHHHHHHhCCC-cCC--CccEEEe--
Confidence 45678999999997766677 667788888888886 1111111 12233334455555554411 000 0123455
Q ss_pred cCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhc-C------------ceeeEEEeecCCCC--C----cCh-
Q 015435 106 CLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLA-G------------LSVKTYRYYDPATR--G----LNF- 165 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~-G------------~~~~~v~~~~~~~~--~----~d~- 165 (407)
++||++|++.++++.+......+|+...-+|++........ | ..+..++..+.... + .+.
T Consensus 108 ~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (442)
T TIGR00709 108 GPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSN 187 (442)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHH
Confidence 79999999999988877755567998898888876544422 1 01222322111000 0 011
Q ss_pred ---hhHHHHHHc---C-CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHH
Q 015435 166 ---QGLLEDLRA---A-PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMF 238 (407)
Q Consensus 166 ---~~l~~~i~~---~-~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~ 238 (407)
+.+++.+.+ . .+..++++.+.++|+....++++.+++|.++|++||+++|.||++.+|++.+ +.+....+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~a~~~~ 264 (442)
T TIGR00709 188 ASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSG---TMFAFEHA 264 (442)
T ss_pred HHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCC---chhHHHHc
Confidence 113333321 1 3456677766666665566899999999999999999999999999998764 34444433
Q ss_pred HHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHH
Q 015435 239 VADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLEL 318 (407)
Q Consensus 239 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 318 (407)
. -..++++ ++|.++. |+++|++ +++ +++ + .+.......+++.+++++.++.+.|+... -
T Consensus 265 g-v~PDiv~---~gK~l~~-G~Pigav--~~~-~~~-~----~~~~~~~~~T~~gnpla~aaa~a~L~~i~--------~ 323 (442)
T TIGR00709 265 G-IEPDFVV---MSKAVGG-GLPLAVL--LIA-PEF-D----AWQPAGHTGTFRGNQLAMVTGTEALNYWK--------D 323 (442)
T ss_pred C-CCCcEEE---EcccccC-CcccEEE--EEc-hHH-h----ccCCCcCCCCCCcCHHHHHHHHHHHHHHH--------h
Confidence 2 2233343 7999995 8999999 565 222 2 22112223456788999999988886321 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC--CCCCcccccCCceeEEe--cCC------------C---HHHHHHhHhhccEEEcCC
Q 015435 319 KAMADRIISMRQQLFDALSARG--TPGDWSHIIKQIGMFTF--TGL------------N---SEQVAFMTKEYHIYMTSD 379 (407)
Q Consensus 319 ~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~--~~~------------~---~~~~~~~l~~~gi~~~~g 379 (407)
+.+.++++++.+++.+.|+++- .+ .+..+...|.++.+ ..- + ...+...+.++|+.+.+.
T Consensus 324 ~~l~~~~~~~g~~l~~~L~~l~~~~~-~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~ 402 (442)
T TIGR00709 324 DNLAQNAQERGERITSFLDDMIKEHP-CIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETG 402 (442)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCC-CeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeec
Confidence 2445677777788887777642 11 12222334444332 110 0 122344455689998764
Q ss_pred ---C---eEEecC-CCCCChhHHHHHHHHHHHh
Q 015435 380 ---G---RISMAG-LSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 380 ---g---Ris~~~-~~~e~i~~~~~~l~~~l~~ 405 (407)
+ |+...- +++++++.+++++.+++++
T Consensus 403 ~~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 435 (442)
T TIGR00709 403 GREGEVFRLLCPITIDQEECEEGISRFKQAVEE 435 (442)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 3 665443 5889999999999998865
No 223
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.87 E-value=7.1e-20 Score=175.78 Aligned_cols=349 Identities=13% Similarity=0.114 Sum_probs=206.1
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccC-CCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEY-LPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y-~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
...++++||+..|....+.| ..++++++++.+++.+ ....+.. .......++.+++++.+...... .+.+.+ .
T Consensus 35 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~~-~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~---~~~~~f-~ 108 (425)
T PRK09264 35 DEDGKEYIDFFAGAGALNYG-HNNPVLKQALIDYLQR-DGITHGLDMHTTAKREFLETFEETILKPRGL---DYKVQF-T 108 (425)
T ss_pred eCCCCEeeecccchhhccCC-CCCHHHHHHHHHHHHh-cccccccccCcHHHHHHHHHHHHhhcCCcCC---CceEEE-e
Confidence 45678999999997666677 6677888888888761 1111111 11222334445555543111111 124545 0
Q ss_pred cCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhc----------Cc---eeeEEEeecCCC-CCcChhhHHHH
Q 015435 106 CLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLA----------GL---SVKTYRYYDPAT-RGLNFQGLLED 171 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~----------G~---~~~~v~~~~~~~-~~~d~~~l~~~ 171 (407)
++||++|++.++++.+......+|+....+|++........ |. .+..+|..+... ..-|++++++.
T Consensus 109 ~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~ 188 (425)
T PRK09264 109 GPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKL 188 (425)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHH
Confidence 48999999999988877755567888888888775432211 11 233344311100 01266778888
Q ss_pred HHcCC----CCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEE
Q 015435 172 LRAAP----SGAIVLLHACAHNPTGV-DPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECL 246 (407)
Q Consensus 172 i~~~~----~~~~v~i~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i 246 (407)
+.+.. ...++++- ....-.|. +++.+.+++|.++|++||+++|+||++.+|+..+ ..+....+. -..++
T Consensus 189 l~~~~~~~~~~aavi~E-pv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG---~~~~~~~~~-v~PDi- 262 (425)
T PRK09264 189 LEDSSSGVDLPAAVIVE-TVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTG---TFFSFERAG-ITPDI- 262 (425)
T ss_pred HHhccCCCCceEEEEEe-cccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCcccc---HHHHHhhcC-CCCCE-
Confidence 86421 23455553 33444565 5789999999999999999999999999887654 233332221 12232
Q ss_pred EEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHH
Q 015435 247 VAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRII 326 (407)
Q Consensus 247 ~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (407)
.+++|.++..|+++|++ +++ ++ +. .+.......+++.+++++.++.+.++.. +. -....++++
T Consensus 263 --~t~~K~l~~~G~pigav--~~~-~~----i~-~~~~~~~~~T~~gnp~~~aaa~a~l~~~-----~~--~~~l~~~~~ 325 (425)
T PRK09264 263 --VTLSKSISGYGLPMALV--LIK-PE----LD-VWKPGEHNGTFRGNNLAFVTATAALEEY-----WS--DDAFEKEVK 325 (425)
T ss_pred --EEeccccCCCccceEEE--EEc-hh----hh-ccCCCccCCCCCCCHHHHHHHHHHHHHH-----Hh--hhHHHHHHH
Confidence 36789999559999999 566 32 21 2222222234456667777666666321 11 123455666
Q ss_pred HHHHHHHHHHHhcC--CCCCcccccCCceeEEecCCCH----HHHHHhHhhccEEEcCCC----eEEec-C--CCCCChh
Q 015435 327 SMRQQLFDALSARG--TPGDWSHIIKQIGMFTFTGLNS----EQVAFMTKEYHIYMTSDG----RISMA-G--LSSKTVP 393 (407)
Q Consensus 327 ~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~gi~~~~gg----Ris~~-~--~~~e~i~ 393 (407)
++.+++.+.|+++. .+. +.......|++.++.+.. ..+...+.++||.+.+.+ ||.+. . +++++++
T Consensus 326 ~~g~~l~~~l~~l~~~~~~-~~~~vrg~Gl~~~i~l~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~p~l~~t~~ei~ 404 (425)
T PRK09264 326 AKGELVRERLEEIAAKYPG-LGAEVRGRGMMQGIDFGDGELAGKIAAEAFENGLIIETSGPEDEVVKLLPPLTIDEEELE 404 (425)
T ss_pred HHHHHHHHHHHHHHHhCCC-ceecceecccEEEEEecChHHHHHHHHHHHHCCCEEeccCCCCCEEEEeCCCCCCHHHHH
Confidence 66677766665541 110 111122345666665522 234455556899997754 55544 1 4789999
Q ss_pred HHHHHHHHHHHh
Q 015435 394 HLTDAIHAAVTR 405 (407)
Q Consensus 394 ~~~~~l~~~l~~ 405 (407)
+++++|.+++++
T Consensus 405 ~~~~~l~~~l~~ 416 (425)
T PRK09264 405 EGLDILEEAVAE 416 (425)
T ss_pred HHHHHHHHHHHH
Confidence 999999998865
No 224
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.87 E-value=1.1e-19 Score=172.66 Aligned_cols=216 Identities=14% Similarity=0.095 Sum_probs=153.5
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCCh----HHHHhhcCc
Q 015435 73 PIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNH----PKVFTLAGL 148 (407)
Q Consensus 73 ~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~----~~~~~~~G~ 148 (407)
+.....+|++.++++. +. ++.++ +++|+.++..++ ...+.+||+|+++...|.+. ...++..|+
T Consensus 68 ~~p~~~~le~~lA~l~-g~-------~~al~--~~sG~~Ai~~~l--~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~ 135 (403)
T PRK07810 68 GNPTVSMFEERLRLIE-GA-------EACFA--TASGMSAVFTAL--GALLGAGDRLVAARSLFGSCFVVCNEILPRWGV 135 (403)
T ss_pred CCchHHHHHHHHHHHh-CC-------CcEEE--ECChHHHHHHHH--HHHhCCCCEEEEccCCcchHHHHHHHHHHHcCc
Confidence 4455789999999988 53 57888 999999999874 45578999999998666443 445667899
Q ss_pred eeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCC
Q 015435 149 SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSL 228 (407)
Q Consensus 149 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~ 228 (407)
+++.++. .|++++++++. +++++|++ .+|+||||.+. ++++|+++|+++|+++|+|++|+......
T Consensus 136 ~v~~vd~-------~d~~~l~~ai~--~~tklV~~-esp~Nptg~v~---dl~~I~~la~~~g~~vivD~a~a~~~~~~- 201 (403)
T PRK07810 136 ETVFVDG-------EDLSQWEEALS--VPTQAVFF-ETPSNPMQSLV---DIAAVSELAHAAGAKVVLDNVFATPLLQR- 201 (403)
T ss_pred EEEEECC-------CCHHHHHHhcC--cCceEEEE-ECCCCCCCeec---CHHHHHHHHHHcCCEEEEECCCCccccCC-
Confidence 9988854 38899999887 66788777 89999999976 58888888999999999999987554321
Q ss_pred CchhHHHHHHHHcCCcEEEEEecCccccccCCCc-ceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcC
Q 015435 229 DADAQSVRMFVADGGECLVAQSYAKNMGLYGERV-GALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKD 307 (407)
Q Consensus 229 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 307 (407)
+. . ....+++.|++|.++.+|.++ |++ +++++...+++ ....+......+...+..+...|+.
T Consensus 202 -----~~----~-~gaDivv~S~tK~l~g~g~~~gG~v--~~~~~~~~~~l----~~~~~~~g~~~s~~~a~l~l~~L~t 265 (403)
T PRK07810 202 -----GL----P-LGADVVVYSGTKHIDGQGRVLGGAI--LGDREYIDGPV----QKLMRHTGPALSAFNAWVLLKGLET 265 (403)
T ss_pred -----hh----h-cCCcEEEccCCceecCCcCceeEEE--EeChHHHHHHH----HHHHHHhCCCCCHHHHHHHHhccCc
Confidence 11 1 134688899999999889988 555 45433222222 2222233335566666666555543
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015435 308 STMYKEWTLELKAMADRIISMRQQLFDALSARG 340 (407)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 340 (407)
+..+.++..++...+.+.|++.+
T Consensus 266 ----------l~~R~~~~~~~a~~~a~~L~~~p 288 (403)
T PRK07810 266 ----------LALRVRHSNASALRIAEFLEGHP 288 (403)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHhcCC
Confidence 44555666677777888888764
No 225
>PRK14012 cysteine desulfurase; Provisional
Probab=99.87 E-value=9.7e-20 Score=174.64 Aligned_cols=289 Identities=16% Similarity=0.145 Sum_probs=181.5
Q ss_pred CcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHh--hcCCCeEEecCCCCCChHHHHh---hcCcee
Q 015435 76 GLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLAR--HYHQLTIYIPQPTWGNHPKVFT---LAGLSV 150 (407)
Q Consensus 76 g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~--~~~gd~Vi~~~p~y~~~~~~~~---~~G~~~ 150 (407)
...++|+.+++++ +. +++++++ ++|+|+++.+++..+.. ..+||+|+++.++|+.....+. ..|+++
T Consensus 50 ~~~~~r~~ia~~~-g~-----~~~~v~~--~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~ 121 (404)
T PRK14012 50 AVDIARNQIADLI-GA-----DPREIVF--TSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEV 121 (404)
T ss_pred HHHHHHHHHHHHc-Cc-----CcCeEEE--eCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEE
Confidence 3667788888877 43 2467999 99999999988543321 3689999999999988766554 459999
Q ss_pred eEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCc
Q 015435 151 KTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDA 230 (407)
Q Consensus 151 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~ 230 (407)
+.++.+ .++.+|++++++.+. ++++++++ ++++||||.+. ++++|.++|+++|+++|+|++++.... ..
T Consensus 122 ~~v~~~--~~g~~d~~~l~~~i~--~~t~lv~~-~~~~n~tG~~~---~~~~I~~la~~~g~~vivD~a~~~g~~-~~-- 190 (404)
T PRK14012 122 TYLDPQ--SNGIIDLEKLEAAMR--DDTILVSI-MHVNNEIGVIQ---DIAAIGEICRERGIIFHVDAAQSVGKV-PI-- 190 (404)
T ss_pred EEEccC--CCCcCCHHHHHHhcC--CCCEEEEE-ECcCCCccchh---hHHHHHHHHHHcCCEEEEEcchhcCCc-cc--
Confidence 999883 456789999999997 56676666 89999999966 578888899999999999999753221 11
Q ss_pred hhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhh---hhcccCCCChhHHHHHHHHhcC
Q 015435 231 DAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLV---IRPMYSSPPIHGASIVATILKD 307 (407)
Q Consensus 231 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~ 307 (407)
+ + ...+..+++.|++|.+| |+ ++|++ +++++.. .++....... .+....+++.........+++.
T Consensus 191 ~---~----~~~~~D~~~~s~~K~~g-p~-g~G~l--~~~~~~~-~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~ 258 (404)
T PRK14012 191 D---L----SKLKVDLMSFSAHKIYG-PK-GIGAL--YVRRKPR-VRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARI 258 (404)
T ss_pred C---c----ccCCCCEEEEehhhccC-CC-ceEEE--EEecCCC-CCCCceecCCCccCCccCCCcCHHHHHHHHHHHHH
Confidence 1 1 11234567779999876 43 57887 4553321 1111100000 0011112233333333333322
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc-----CCceeEEecC-CCHHHHHHhHhhccEEEcCC--
Q 015435 308 STMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHII-----KQIGMFTFTG-LNSEQVAFMTKEYHIYMTSD-- 379 (407)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~l~~~gi~~~~g-- 379 (407)
.. ...+...++.++.++++.+.|+++.. +.... ....++.+.. .+.+.+...|+ ++.+..+
T Consensus 259 ~~------~~~~~~~~~~~~l~~~l~~~L~~~~~---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~i~~g~~ 327 (404)
T PRK14012 259 AK------EEMATENERIRALRDRLWNGIKDIEE---VYLNGDLEQRVPGNLNVSFNYVEGESLIMALK--DLAVSSGSA 327 (404)
T ss_pred HH------hhHHHHHHHHHHHHHHHHHHHhcCCC---EEEeCCccccCCCEEEEEEeCcCHHHHHHhCC--CeEEEchhh
Confidence 11 22445567778888888888876542 22211 1122233333 34444444444 3333221
Q ss_pred -----------------------C--eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 380 -----------------------G--RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 380 -----------------------g--Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
+ |+++.. .+++|++++++.|+++++.+
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~ 380 (404)
T PRK14012 328 CTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKL 380 (404)
T ss_pred hCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 2 898876 57899999999999988654
No 226
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.87 E-value=8.5e-20 Score=170.49 Aligned_cols=347 Identities=15% Similarity=0.112 Sum_probs=226.2
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC 106 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t 106 (407)
...++.+|||..|+...+.| ..++.+++++.+++..-......|.+.....++.+++.+...+. ..+.+++ +
T Consensus 52 DvdG~~ylDf~sgi~v~~~G-H~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~-----~~~~~~f--~ 123 (447)
T COG0160 52 DVDGNEYLDFLSGIAVLNLG-HNHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGS-----GLKKVFF--G 123 (447)
T ss_pred eCCCCEEEEcccCcchhccC-CCCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCcc-----cCCeEEe--c
Confidence 45689999999987656777 77889999998888621112233433344556677777766321 1378999 9
Q ss_pred CCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHh-h-------------cCceeeEEEeecCCCC--Cc-------
Q 015435 107 LSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFT-L-------------AGLSVKTYRYYDPATR--GL------- 163 (407)
Q Consensus 107 ~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~-~-------------~G~~~~~v~~~~~~~~--~~------- 163 (407)
++|++|+++++++.+.......||...-+|++...... . ..-.+..+|..++... +.
T Consensus 124 ~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~ 203 (447)
T COG0160 124 NSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGD 203 (447)
T ss_pred CCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhH
Confidence 99999999999998888777899999988876543222 1 1113555665332211 11
Q ss_pred -ChhhHHHHHHc---CCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHH
Q 015435 164 -NFQGLLEDLRA---APSGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMF 238 (407)
Q Consensus 164 -d~~~l~~~i~~---~~~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~ 238 (407)
..+.+++.+.. .+...+.+|+-.-+...|.+ .|++.++++.++|++||+++|+||+..+++..| +.|.+..+
T Consensus 204 ~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG---~~fa~E~~ 280 (447)
T COG0160 204 DALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTG---KMFAFEHF 280 (447)
T ss_pred HHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---cchhhhhc
Confidence 12334443322 23344444434445556665 788899999999999999999999999999886 56666655
Q ss_pred HHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHH
Q 015435 239 VADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLEL 318 (407)
Q Consensus 239 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 318 (407)
.-. .+++ +++|.++ .|+++|.+ +.. +++.+ ........++..+++++.++.+.|+-.+ -
T Consensus 281 gv~-PDiv---t~aK~ig-~G~Pl~av--v~r-----~ei~~-~~~g~~~~Tf~GNpva~Aaa~AvL~vie--------~ 339 (447)
T COG0160 281 GVE-PDIV---TLAKSLG-GGLPLSAV--VGR-----AEIMD-WPPGGHGGTFGGNPVACAAALAVLDVIE--------E 339 (447)
T ss_pred CCC-CCEE---Eeccccc-CCCceeEE--ecc-----HHhcc-cCCcccCCCCCcCHHHHHHHHHHHHHHH--------H
Confidence 332 2333 3799999 59999999 565 44544 2223334456889999999888887332 2
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCceeEEecCC---------CHH---HHHHhHhhccEEEcCCC-----
Q 015435 319 KAMADRIISMRQQLFDALSARGTPG-DWSHIIKQIGMFTFTGL---------NSE---QVAFMTKEYHIYMTSDG----- 380 (407)
Q Consensus 319 ~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~---~~~~~l~~~gi~~~~gg----- 380 (407)
+.+.++..+.-+++.+.|.++.... .+--+...| ++.-+.+ +.+ .+...+.++|+.+..+|
T Consensus 340 e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~G-lm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G~~~nv 418 (447)
T COG0160 340 ENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLG-LMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCGPHGNV 418 (447)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhhcCceecccccc-eEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccCCCCcE
Confidence 2566777788888888887653210 011122223 3332311 222 34444555898888766
Q ss_pred -eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 381 -RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 381 -Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
||...- +++++++.+++.|.+++++.
T Consensus 419 iRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 419 LRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred EEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 886542 58899999999999999764
No 227
>PRK05939 hypothetical protein; Provisional
Probab=99.86 E-value=7.2e-19 Score=166.65 Aligned_cols=277 Identities=18% Similarity=0.164 Sum_probs=180.2
Q ss_pred cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHH---HHhhcCceeeEE
Q 015435 77 LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPK---VFTLAGLSVKTY 153 (407)
Q Consensus 77 ~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~---~~~~~G~~~~~v 153 (407)
...|.++++++. +. +..++ +++|+.|+..++ ...+.+||+|+++++.|+.+.. .+...|++++.+
T Consensus 49 ~~~lE~~la~le-g~-------~~~v~--~ssG~~Ai~~~l--~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v 116 (397)
T PRK05939 49 TAALEAKITKME-GG-------VGTVC--FATGMAAIAAVF--LTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMV 116 (397)
T ss_pred HHHHHHHHHHHh-CC-------CeEEE--eCCHHHHHHHHH--HHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEE
Confidence 448888899877 43 34555 777799999884 4558899999999999987654 455789999888
Q ss_pred EeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeecccccccc-CCCCCchh
Q 015435 154 RYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFA-SGSLDADA 232 (407)
Q Consensus 154 ~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~-~~~~~~~~ 232 (407)
+. .|++++++.+. ++++++++ ++|+||||.+ .++++|+++|+++|+++|+|++|.... ++.
T Consensus 117 ~~-------~d~e~l~~~l~--~~tklV~v-esp~NptG~v---~dl~~I~~la~~~gi~livD~t~a~~~~~~~----- 178 (397)
T PRK05939 117 DA-------TDVQNVAAAIR--PNTRMVFV-ETIANPGTQV---ADLAGIGALCRERGLLYVVDNTMTSPWLFRP----- 178 (397)
T ss_pred CC-------CCHHHHHHhCC--CCCeEEEE-ECCCCCCCCH---HhHHHHHHHHHHcCCEEEEECCcccccccCc-----
Confidence 65 37899999887 67788777 8999999995 689999999999999999999975322 110
Q ss_pred HHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChh--------hHHHH---------HHHHh-hhhhcccCCCC
Q 015435 233 QSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTED--------VASRV---------ESQLK-LVIRPMYSSPP 294 (407)
Q Consensus 233 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~--------~~~~~---------~~~~~-~~~~~~~~~~~ 294 (407)
......+++.|+||.++.+|.++|++ ++.+.. ....+ ...+. ...+......+
T Consensus 179 -------~~~gaDivv~S~sK~~~g~g~~igg~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 249 (397)
T PRK05939 179 -------KDVGASLVINSLSKYIAGHGNALGGA--VTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLS 249 (397)
T ss_pred -------cccCCEEEEecCeecccCCCCeEEEE--EecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCC
Confidence 11245799999999999999999998 454221 11100 11111 11112222334
Q ss_pred hhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc---------------ccCCceeEEecC
Q 015435 295 IHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSH---------------IIKQIGMFTFTG 359 (407)
Q Consensus 295 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~---------------~~~~~~~~~~~~ 359 (407)
+.....+..-++ .+..+.++..++...+.+.|++.+.-..+.+ ....|+++.+.=
T Consensus 250 p~~a~l~~rgl~----------tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~ 319 (397)
T PRK05939 250 SEAAHRIAIGAE----------TLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFEL 319 (397)
T ss_pred HHHHHHHHcCcC----------cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEe
Confidence 444444433333 2445555666688888888887652000111 012466665431
Q ss_pred CCHHHHHHhHhhccEEE-cC--C-----------------------------C--eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 360 LNSEQVAFMTKEYHIYM-TS--D-----------------------------G--RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 360 ~~~~~~~~~l~~~gi~~-~~--g-----------------------------g--Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
-+.+.+.++++...+.. .+ | + |||++- |+.+.+++-|.++|+.
T Consensus 320 ~~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGl---Ed~~dLi~dl~~Al~~ 396 (397)
T PRK05939 320 ADGIDCFDFLNRLKLVIKATHLGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVGI---EDEADLIADFEQALDA 396 (397)
T ss_pred CCHHHHHHHHHhCCcceEccCCCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeCC---CCHHHHHHHHHHHHhc
Confidence 13344555555544421 11 1 1 888873 8899999999998864
No 228
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=4.6e-19 Score=169.43 Aligned_cols=157 Identities=17% Similarity=0.168 Sum_probs=123.3
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHH----HHhhcCce
Q 015435 74 IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPK----VFTLAGLS 149 (407)
Q Consensus 74 ~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~----~~~~~G~~ 149 (407)
......|.+.++++. +. ++.++ ++||++|+..++ ...+.+||+|+++.+.|..... .++..|++
T Consensus 63 ~p~~~~Le~~lA~le-g~-------~~al~--~~sG~~Ai~~al--~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~ 130 (431)
T PRK08248 63 NPTTDVFEKRIAALE-GG-------IGALA--VSSGQAAITYSI--LNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGIT 130 (431)
T ss_pred CchHHHHHHHHHHHh-CC-------CcEEE--ECCHHHHHHHHH--HHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEE
Confidence 344678888899887 43 67888 999999999884 5558899999999999876443 45578999
Q ss_pred eeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCC
Q 015435 150 VKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLD 229 (407)
Q Consensus 150 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~ 229 (407)
++.++. .|++++++++. ++++++++ ++|+||||.+.+ +++|+++|+++|+++|+|++|.... .
T Consensus 131 v~~vd~-------~d~e~l~~ai~--~~tklV~l-~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~~~-~--- 193 (431)
T PRK08248 131 VKFVDP-------SDPENFEAAIT--DKTKALFA-ETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFASPY-L--- 193 (431)
T ss_pred EEEECC-------CCHHHHHHhcC--CCCeEEEE-ECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCccc-c---
Confidence 988865 37889999887 56778777 799999999876 6788888999999999999975211 1
Q ss_pred chhHHHHHHHHcCCcEEEEEecCccccccCCCcceeE
Q 015435 230 ADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALS 266 (407)
Q Consensus 230 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 266 (407)
..++ .....+++.|++|.++.+|.++|+++
T Consensus 194 --~~pl-----~~gaDivv~S~tK~lgg~g~~~Gg~v 223 (431)
T PRK08248 194 --LRPI-----EHGADIVVHSATKFIGGHGTSIGGVI 223 (431)
T ss_pred --CChh-----HcCCCEEEEcCccccCCCCCceEEEE
Confidence 1111 12456888999999999999999984
No 229
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=6.4e-19 Score=165.76 Aligned_cols=281 Identities=13% Similarity=0.146 Sum_probs=187.6
Q ss_pred ccCCC--CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHH---
Q 015435 69 KEYLP--IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVF--- 143 (407)
Q Consensus 69 ~~y~~--~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~--- 143 (407)
..|++ ..+...|+++++++. +. +++++ ++||++|+..++ ...+.+||+|++++|.|.++...+
T Consensus 53 ~~Y~r~~npt~~~Le~~iA~le-~~-------~~~~~--~~sG~~Ai~~~l--~all~~GD~Vvv~~~~Y~~t~~l~~~~ 120 (394)
T PRK09028 53 MFYGRRGTPTHFAFQAAIVELE-GG-------AGTAL--YPSGAAAISNAL--LSFLKAGDHLLMVDSCYEPTRDLCDKI 120 (394)
T ss_pred ceecCCCCchHHHHHHHHHHHh-CC-------CcEEE--ECCHHHHHHHHH--HHHhCCCCEEEEECCCcHHHHHHHHHh
Confidence 44666 335679999999987 42 57888 999999999984 556889999999999998887543
Q ss_pred -hhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeecccccc
Q 015435 144 -TLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQG 222 (407)
Q Consensus 144 -~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~ 222 (407)
...|+++..++. .+.+.+++.+. ++++++++ ++|+||||. ..++++|+++|+++|+++|+|++|+.
T Consensus 121 l~~~Gi~v~~v~~-------~~~e~l~~~l~--~~TklV~l-espsNPtg~---v~dl~~I~~la~~~g~~lvvD~t~a~ 187 (394)
T PRK09028 121 LKGFGIETTYYDP-------MIGEGIRELIR--PNTKVLFL-ESPGSITME---VQDVPTLSRIAHEHDIVVMLDNTWAS 187 (394)
T ss_pred hhhcceEEEEECC-------CCHHHHHHhcC--cCceEEEE-ECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCccc
Confidence 457888776643 14577888876 67888777 899999988 67899999999999999999999964
Q ss_pred ccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCC-CcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHH
Q 015435 223 FASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGE-RVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIV 301 (407)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (407)
...- . ++ .....+++.|.+|.++.+|- -.|++ +.+++..+++ ...........++.....+
T Consensus 188 p~~~----~--Pl-----~~GaDivv~S~tK~l~Gh~d~~~G~~---~~~~~~~~~l----~~~~~~~G~~~~p~~a~l~ 249 (394)
T PRK09028 188 PINS----R--PF-----EMGVDISIQAATKYIVGHSDVMLGTA---TANEKHWDQL----REHSYLMGQCTSPDDVYLA 249 (394)
T ss_pred cccC----C--cc-----ccCceEEEEeCCeEecCCCCEEEEEE---ECCHHHHHHH----HHHHHhcCCCCCHHHHHHH
Confidence 3321 0 11 12457999999999965654 44544 5555543333 3232233335566555555
Q ss_pred HHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CC-----Cccc----ccCCceeEEec-C-CCHHH
Q 015435 302 ATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGT------PG-----DWSH----IIKQIGMFTFT-G-LNSEQ 364 (407)
Q Consensus 302 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~-----~~~~----~~~~~~~~~~~-~-~~~~~ 364 (407)
...|+. +..+.++..++...+.+.|++.+. |. ..+. ....||++.|. + -+.+.
T Consensus 250 ~rgl~T----------L~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~ 319 (394)
T PRK09028 250 MRGLRT----------LGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKA 319 (394)
T ss_pred HcccCc----------HHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHH
Confidence 544443 455667778888889999987652 10 0000 11236666654 2 23444
Q ss_pred HHHhHhhccEEE---c----------C---------------CC--eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 365 VAFMTKEYHIYM---T----------S---------------DG--RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 365 ~~~~l~~~gi~~---~----------~---------------gg--Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
+.++++.-.+.. + | ++ |||++- |+.+.+++-|.++|+.
T Consensus 320 ~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~~~~~~~~~~~~~~liR~svGl---Ed~~dLi~Dl~~Al~~ 387 (394)
T PRK09028 320 VTALVEGMQHFKMGFSWGGFESLILGVFGINKLRTATNWDFSKPLIRLHIGL---EDVDDLIADLEAGFER 387 (394)
T ss_pred HHHHHHhCCcceEecccCCCcceeECCCCcCccCchhhhcCCCCeEEEEeCc---CCHHHHHHHHHHHHHH
Confidence 555555533322 1 1 12 888873 7888888888888864
No 230
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.86 E-value=2.3e-19 Score=168.15 Aligned_cols=277 Identities=14% Similarity=0.148 Sum_probs=184.8
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeE
Q 015435 73 PIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKT 152 (407)
Q Consensus 73 ~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~ 152 (407)
+.....+|+++++++. +. +++++ ++||++|+.+++ ..+.+||+|+++.+.|......+...-.+. .
T Consensus 52 ~~p~~~~le~~lA~le-g~-------~~~v~--~~sG~aAi~~~l---~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~-~ 117 (364)
T PRK07269 52 KNPTRAKLEETLAAIE-SA-------DYALA--TSSGMSAIVLAF---SVFPVGSKVVAVRDLYGGSFRWFNQQEKEG-R 117 (364)
T ss_pred CCccHHHHHHHHHHHh-CC-------CeEEE--eCCHHHHHHHHH---HHhCCCCEEEEecCCcCchHHHHHHHHhcC-c
Confidence 4556889999999988 43 68988 999999999884 346899999999999987665444221110 1
Q ss_pred EEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchh
Q 015435 153 YRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADA 232 (407)
Q Consensus 153 v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~ 232 (407)
+.. .+..|++++++++. +++++|++ ++|+||||.+. ++++|+++|+++|+++|+|++|......
T Consensus 118 ~~~----~~~~d~~~l~~~i~--~~TklV~l-esP~NPtg~~~---di~~I~~la~~~gi~vvvD~t~~~~~~~------ 181 (364)
T PRK07269 118 FHF----TYANTEEELIAAIE--EDTDIVYI-ETPTNPLMVEF---DIEKVAKLAHAKGAKVIVDNTFYSPIYQ------ 181 (364)
T ss_pred EEE----EecCCHHHHHHhcC--cCceEEEE-ECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccccC------
Confidence 111 12358899999987 67888777 99999999865 7889999999999999999997533221
Q ss_pred HHHHHHHHcCCcEEEEEecCccccccCC-CcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhH
Q 015435 233 QSVRMFVADGGECLVAQSYAKNMGLYGE-RVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMY 311 (407)
Q Consensus 233 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~-r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 311 (407)
.++ . ....++++|++|.++.+|- =.|++ ++.++++.+++.. .........+......+...|+.
T Consensus 182 ~pl----~-~gaDivv~S~tK~l~g~~d~~gG~v--~~~~~~l~~~~~~----~~~~~G~~~s~~~a~l~~~~L~t---- 246 (364)
T PRK07269 182 RPI----E-LGADIVLHSATKYLSGHNDVLAGVV--VTNDLELYEKLFY----NLNTTGAVLSPFDSYLLMRGLKT---- 246 (364)
T ss_pred Cch----h-hCCcEEEecCceeccCCCcccceEE--EeCcHHHHHHHHH----HHHHhCCCCCHHHHHHHHcCCCc----
Confidence 111 1 1234899999999986554 24666 5666666555442 22222234555555555544443
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCCHHHHHHhHhhcc-------------EEEcC
Q 015435 312 KEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYH-------------IYMTS 378 (407)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-------------i~~~~ 378 (407)
+....++.+++...+.+.|++.+. ....+.++.||++.|.-.+.+.+.++++.-. +.+.|
T Consensus 247 ------L~~r~~~~~~na~~~a~~L~~~p~-v~~v~ypg~gg~~sf~~~~~~~~~~f~~~l~~~~~~~slG~~~sl~~~p 319 (364)
T PRK07269 247 ------LSLRMERSTANAQEVVAFLKKSPA-VKEVLYTGKGGMISFKVADETRIPHILNSLKVFTFAESLGGVESLITYP 319 (364)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHhCCC-ccEEeCCCcCcEEEEEECCHHHHHHHHHhCCcceEccCCCCcCeEeeCC
Confidence 456667778888899999987642 0123347788888876334433333333222 22222
Q ss_pred C---------------C------eEEecCCCCCChhHHHHHHHHHHH
Q 015435 379 D---------------G------RISMAGLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 379 g---------------g------Ris~~~~~~e~i~~~~~~l~~~l~ 404 (407)
. | |+|++- |+.+.+++-|+++|+
T Consensus 320 ~~~~~~~~~~~~r~~~Gi~~~liRlsvGl---E~~~dli~dl~~al~ 363 (364)
T PRK07269 320 TTQTHADIPAEVRHSYGLTDDLLRLSIGI---EDARDLIADLKQALE 363 (364)
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHhc
Confidence 1 1 888873 889999999998875
No 231
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.86 E-value=2.7e-19 Score=169.86 Aligned_cols=339 Identities=12% Similarity=0.053 Sum_probs=207.4
Q ss_pred cCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 28 DTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 28 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
..++++|||..|....+.| ...+.+++++.+++. . ..+.+. ....+....+++.+..... .+.+++ ++
T Consensus 33 ~dG~~~lD~~sg~~~~~lG-h~~p~v~~a~~~q~~--~-~~~~~~--~~~~~~~~~la~~l~~~~~----~~~v~f--~~ 100 (395)
T PRK03715 33 HNGKRYLDFIQGWAVNCLG-HCNPGMVEALAAQAE--K-LINPSP--AFYNEPMAKLAGLLTQHSC----FDKVFF--AN 100 (395)
T ss_pred CCCCEEEECCcChhhccCC-CCCHHHHHHHHHHHH--h-cccccc--cccCHHHHHHHHHHhhccC----CCEEEE--eC
Confidence 4578999999986655567 556777777777775 2 112111 1234566677777733211 268999 99
Q ss_pred CcccHHHHHHHHHHhhc----CC-CeEEecCCCCCChHHHH-hhcCceee---EEEeec--CCCCCcChhhHHHHHHcCC
Q 015435 108 SGTGSLRVGAEFLARHY----HQ-LTIYIPQPTWGNHPKVF-TLAGLSVK---TYRYYD--PATRGLNFQGLLEDLRAAP 176 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~----~g-d~Vi~~~p~y~~~~~~~-~~~G~~~~---~v~~~~--~~~~~~d~~~l~~~i~~~~ 176 (407)
||++|++.++++..... +| .+|+..+.+|++..... ...|.... ..|... ......|++++++.+. +
T Consensus 101 SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~--~ 178 (395)
T PRK03715 101 SGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLIT--D 178 (395)
T ss_pred CcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcC--C
Confidence 99999999988876542 23 57888888887764433 33332211 111100 0000136788888886 4
Q ss_pred CCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccc
Q 015435 177 SGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNM 255 (407)
Q Consensus 177 ~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 255 (407)
+..++++ ...+...|.. .+++.+++|.++|++||+++|+||++.+++..+ ..+....+.- ..+ +.+++|.+
T Consensus 179 ~~aavi~-Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG---~~~a~~~~gv-~PD---i~t~gK~l 250 (395)
T PRK03715 179 KTVAVML-EPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTG---TLFAYELSGI-EPD---IMTLGKGI 250 (395)
T ss_pred CceEEEE-eCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCc---chhhHhhcCC-CCc---eeeehhhh
Confidence 5566666 4445556665 478999999999999999999999999887654 2333222211 122 34689999
Q ss_pred cccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHH
Q 015435 256 GLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDA 335 (407)
Q Consensus 256 ~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 335 (407)
+ .|+++|.+ ++. ++ +.. +.......+++.+++++.++.+.++... -+.+.++++++.+++.+.
T Consensus 251 g-~G~p~~av--~~~-~~----i~~-~~~~~~~~T~~g~pl~~aaala~L~~l~--------~~~l~~~~~~~g~~l~~~ 313 (395)
T PRK03715 251 G-GGVPLAAL--LAK-AE----VAV-FEAGDQGGTYNGNPLMTAVGVAVISQLL--------APGFLEGVRARGEYLKEK 313 (395)
T ss_pred h-CCcceEEE--EEc-cc----ccc-ccCCCcCCCCCCCHHHHHHHHHHHHHHH--------hccHHHHHHHHHHHHHHH
Confidence 8 67999998 455 33 221 1111112344667777777777765331 134567777788888888
Q ss_pred HHhcCCCCCcccccCCceeEEecCCC---HHHHHHhHhhc---cEEEcCCC----eEEecC-CCCCChhHHHHHHHHHHH
Q 015435 336 LSARGTPGDWSHIIKQIGMFTFTGLN---SEQVAFMTKEY---HIYMTSDG----RISMAG-LSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 336 l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~---gi~~~~gg----Ris~~~-~~~e~i~~~~~~l~~~l~ 404 (407)
|+++.....+......|.++. +.+. ...+...+.+. |+.+.+.+ ||+... +++++++.++++|+++++
T Consensus 314 L~~l~~~~~i~~vrG~Glm~~-i~l~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~lR~~p~l~~t~~ei~~~~~~l~~~l~ 392 (395)
T PRK03715 314 LLELSEERGLEGERGEGLLRA-LLLGKDIGPQIVEKARDMQPDGLLLNAPRPNLLRFMPALNVTTEEIDQMIAMLRSVLD 392 (395)
T ss_pred HHHHhhcCCcCeEEcceeEEE-EEecCchHHHHHHHHHhccCCCEEEeecCCCEEEEeCCcccCHHHHHHHHHHHHHHHH
Confidence 876521111332333343333 3222 23333333334 99986543 777653 588999999999999987
Q ss_pred hh
Q 015435 405 RM 406 (407)
Q Consensus 405 ~~ 406 (407)
++
T Consensus 393 ~~ 394 (395)
T PRK03715 393 KL 394 (395)
T ss_pred hh
Confidence 65
No 232
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.86 E-value=4e-19 Score=167.82 Aligned_cols=283 Identities=18% Similarity=0.158 Sum_probs=182.2
Q ss_pred ccCCCCC--CcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHH----
Q 015435 69 KEYLPIV--GLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKV---- 142 (407)
Q Consensus 69 ~~y~~~~--g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~---- 142 (407)
..|+... ....+++.+++++ +. +++++ +++|+.++.+++ ..+.+||+|+++++.|.++...
T Consensus 39 ~~Y~r~~~p~~~~le~~la~l~-g~-------~~~l~--~~sG~~al~~~l---~ll~~Gd~Vl~~~~~y~~~~~~~~~~ 105 (378)
T TIGR01329 39 YDYTRSGNPTRTALESLLAKLD-KA-------DRAFA--FSSGMAALDVIT---RLLNNGDEIIAGDDLYGGTDRLLTQV 105 (378)
T ss_pred CccCCCCChHHHHHHHHHHHHh-CC-------CcEEE--ECCHHHHHHHHH---HHhCCCCEEEEcCCCchHHHHHHHHH
Confidence 4465432 2567788888876 43 56777 778888888763 3578999999999999887654
Q ss_pred HhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeecccccc
Q 015435 143 FTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQG 222 (407)
Q Consensus 143 ~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~ 222 (407)
+...|++++.++. .|+++++++++ ++++++++ ++|+||||.+. ++++|+++|+++|+++|+|+++..
T Consensus 106 ~~~~G~~v~~vd~-------~d~~~le~~i~--~~tklv~l-e~psnptg~v~---dl~~I~~la~~~g~~vivD~a~~~ 172 (378)
T TIGR01329 106 VPRSGVVVVHVDT-------TDLDKVKAALG--PKTKLVLL-ESPTNPLQKIV---DIRKISEMAHAQNALVVVDNTMMS 172 (378)
T ss_pred HHHcCcEEEEeCC-------CCHHHHHHhcC--cCceEEEE-ECCCCCCCeee---cHHHHHHHHHHcCCEEEEECCCcc
Confidence 4467999998865 27889999887 66788777 89999999976 488999999999999999999743
Q ss_pred ccCCCCCchhHHHHHHHHcCCcEEEEEecCcccccc-CCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHH
Q 015435 223 FASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLY-GERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIV 301 (407)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (407)
.... .++ . ....++++|++|.++.+ +.+.|++ +++++++.+++ ...........+...+..+
T Consensus 173 ~~~~------~~l----~-~g~Di~v~S~tK~l~G~~~~~~G~v--~~~~~~~~~~~----~~~~~~~G~~~~~~~a~l~ 235 (378)
T TIGR01329 173 PLLC------NPL----E-LGADIVYHSATKFLAGHSDVMAGVL--AVKGEEIAKKV----YFLQNSTGSGLAPFDCWLL 235 (378)
T ss_pred cccC------Chh----h-cCCcEEEEecceeccCCccceeEEE--EeCcHHHHHHH----HHHHHhcCCcCCHHHHHHH
Confidence 3221 111 1 12358899999988643 4677888 56655543433 3332222223344333333
Q ss_pred HHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CC-----Ccccc----cCCceeEEecCCCHH---
Q 015435 302 ATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGT------PG-----DWSHI----IKQIGMFTFTGLNSE--- 363 (407)
Q Consensus 302 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~-----~~~~~----~~~~~~~~~~~~~~~--- 363 (407)
...++ .+..+.++..++...+.+.|++.+. |. .+... ...++++.|.--+.+
T Consensus 236 ~~~l~----------tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~ 305 (378)
T TIGR01329 236 LRGIK----------TLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSK 305 (378)
T ss_pred HccCC----------CHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHH
Confidence 32232 2444555666677777777775532 00 00100 123466665421222
Q ss_pred HHHHhHhhccEEEcCCC-------------------------------eEEecCCCCCChhHHHHHHHHHHHhhC
Q 015435 364 QVAFMTKEYHIYMTSDG-------------------------------RISMAGLSSKTVPHLTDAIHAAVTRMG 407 (407)
Q Consensus 364 ~~~~~l~~~gi~~~~gg-------------------------------Ris~~~~~~e~i~~~~~~l~~~l~~~~ 407 (407)
.+...|+..++.++-|| |+|++- |+.+.+++-|+++|+..+
T Consensus 306 ~~~~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~~~ 377 (378)
T TIGR01329 306 RLVEATKLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI---EDVDDLISDLDIAFVTAP 377 (378)
T ss_pred HHHHhCcCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhcc
Confidence 23334455666665442 888773 889999999999998654
No 233
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.86 E-value=4.4e-19 Score=170.74 Aligned_cols=346 Identities=14% Similarity=0.098 Sum_probs=206.4
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccc-cCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVK-EYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
...++++||+..|....+.| ..++++++++.+++. ...... .+.+.....++.+.+++...+. ..+.+++
T Consensus 38 D~dG~~ylD~~~g~~~~~lG-H~~p~v~~Ai~~ql~-~~~~~~~~~~~~~~~~~lae~L~~~~p~~-----~~~~v~f-- 108 (445)
T PRK08593 38 DVDGKTYIDLLASASSQNVG-HAPPRVVEAIKAQAD-KFIHYTPAYMYHEPLVRLAKKLCELAPGD-----FEKRVTF-- 108 (445)
T ss_pred eCCCCEEEECCccHHhhcCC-CCCHHHHHHHHHHHH-hccCccccccCCHHHHHHHHHHHHhCCCC-----CCCEEEE--
Confidence 45678999999886655667 667788888888875 111111 1112233445566666554111 0157999
Q ss_pred cCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHh-hcC-------------ceeeEEEeecCCC--CC-cC----
Q 015435 106 CLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFT-LAG-------------LSVKTYRYYDPAT--RG-LN---- 164 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~-~~G-------------~~~~~v~~~~~~~--~~-~d---- 164 (407)
++||++|++.++++.+......+|+...-+|++...... ..+ ..++.+|..+... +. .+
T Consensus 109 ~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 188 (445)
T PRK08593 109 GLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFV 188 (445)
T ss_pred CCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHH
Confidence 999999999998887766545678888888887654332 111 1123333311100 00 11
Q ss_pred ---hhhHHHHHHc---CCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHH
Q 015435 165 ---FQGLLEDLRA---APSGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRM 237 (407)
Q Consensus 165 ---~~~l~~~i~~---~~~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~ 237 (407)
++++++.+.. ..+..++++ -......|.+ .+++.+++|.++|++||+++|+||++.+|+..+ ..+....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~iAavI~-EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG---~~~a~~~ 264 (445)
T PRK08593 189 EEYLAPLKEMFEKYLPADEVACIVI-ETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTG---KWSSISH 264 (445)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEE-ccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---hHHHHHh
Confidence 1344444432 133455555 4456666776 789999999999999999999999999887654 2223322
Q ss_pred HHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHH
Q 015435 238 FVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLE 317 (407)
Q Consensus 238 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 317 (407)
+.- ..+ +.+++|.++ .|+++|++ +++ ++ +.+.+.......+.+.+++++.++.+.++... +
T Consensus 265 ~gv-~pD---i~t~gK~l~-~G~p~gav--~~~-~~----i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~------~- 325 (445)
T PRK08593 265 FNI-TPD---LMSFGKSLA-GGMPMSAI--VGR-KE----IMESLEAPAHLFTTGANPVSCAAALATIDMIE------D- 325 (445)
T ss_pred cCC-CCC---Eeeeccccc-CCcccEEE--EEc-HH----HHhhhccCCCCCCCCCCHHHHHHHHHHHHHHH------h-
Confidence 211 122 336899998 78999998 565 44 44434322223455677888888877775331 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC--CCCCcccccCCceeEEe--cC-----C-CH---HHHHHhHhhccEEEcCC-C---
Q 015435 318 LKAMADRIISMRQQLFDALSARG--TPGDWSHIIKQIGMFTF--TG-----L-NS---EQVAFMTKEYHIYMTSD-G--- 380 (407)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~--~~-----~-~~---~~~~~~l~~~gi~~~~g-g--- 380 (407)
+.+.++.+++.+++.+.|+++. .+ .+..+...|.++.+ .. . +. ..+...+.++||.+.+. +
T Consensus 326 -~~l~~~~~~~g~~l~~~L~~l~~~~~-~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~~~l 403 (445)
T PRK08593 326 -ESLLQRSAEKGEYARKRFDQWVSKYN-FVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAVAGNVL 403 (445)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHhcCC-cEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEeccCCCEE
Confidence 2345566666677777776541 11 01122223333221 11 0 11 22334455589999764 3
Q ss_pred eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 381 RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 381 Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
|++... ++++|++.+++++.++++++
T Consensus 404 r~~p~l~~t~~~id~~~~~l~~~l~~~ 430 (445)
T PRK08593 404 RFQPPLVITYEQLDTALNTIEQAFTAL 430 (445)
T ss_pred EEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 665543 58899999999999998754
No 234
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.85 E-value=3.5e-19 Score=167.99 Aligned_cols=159 Identities=18% Similarity=0.139 Sum_probs=120.0
Q ss_pred CceEEeecCCcccHHHHHHHHHHh-hcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCC
Q 015435 99 NRVTTVQCLSGTGSLRVGAEFLAR-HYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPS 177 (407)
Q Consensus 99 ~~i~~~~t~g~t~a~~~~~~~~~~-~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 177 (407)
+++++ |+|||+++.+++ ... +.+||+|++++++|..+...+...|++++.++++ ++++.+|+++++++++ ++
T Consensus 47 ~~~v~--~~sgt~aL~~~l--~al~~~pGd~Viv~~~t~~~~~~~~~~~G~~~v~vd~d-~~~~~~d~~~le~~i~--~~ 119 (376)
T TIGR02379 47 KKALL--TPSCTAALEMAA--LLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIR-PDTMNIDETLIESAIT--HR 119 (376)
T ss_pred CeEEE--eCCHHHHHHHHH--HHcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecC-CCcCCCCHHHHHHhcC--cC
Confidence 78999 999999999884 333 6799999999999999999999999999999994 5557899999999887 56
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeecccccccc-CCCCCchhHHHHHHHHcCCcEEEEEecCcccc
Q 015435 178 GAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFA-SGSLDADAQSVRMFVADGGECLVAQSYAKNMG 256 (407)
Q Consensus 178 ~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 256 (407)
+++++ |+||||...+ +++|.++|++||++||+|++++.+. +.+. . ....++-..+.+..+|.++
T Consensus 120 tk~Ii----p~~~~G~~~d---~~~I~~la~~~~i~vIeDaa~~~g~~~~~~-----~---~g~~~~~~~fSf~~~K~l~ 184 (376)
T TIGR02379 120 TKAIV----PVHYAGVACD---MDTIMALANKHQLFVIEDAAQGVMSTYKGR-----A---LGSIGHLGTFSFHETKNYT 184 (376)
T ss_pred ceEEE----EeCCCCCccC---HHHHHHHHHHCCCEEEEECccccCCccCCc-----c---cCCCCCEEEEeCCCCCcCc
Confidence 66654 4678999664 7788888999999999999987654 3321 1 1111122222222347776
Q ss_pred ccCCCcceeEEeecChhhHHHHHHHH
Q 015435 257 LYGERVGALSIVCKTEDVASRVESQL 282 (407)
Q Consensus 257 ~~G~r~G~~~~v~~~~~~~~~~~~~~ 282 (407)
+|.+.|++ +++++++.+++....
T Consensus 185 -~g~~gG~v--~~~~~~~~~~~~~~~ 207 (376)
T TIGR02379 185 -SGGEGGAL--LINDQAFIERAEIIR 207 (376)
T ss_pred -ccCCceEE--EECCHHHHHHHHHHH
Confidence 67788998 788888888766543
No 235
>PLN02509 cystathionine beta-lyase
Probab=99.85 E-value=8.2e-19 Score=167.94 Aligned_cols=283 Identities=16% Similarity=0.150 Sum_probs=179.2
Q ss_pred ccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHH----Hh
Q 015435 69 KEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKV----FT 144 (407)
Q Consensus 69 ~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~----~~ 144 (407)
+.|.+. |.+ .++++.+++....+ .++.++ ++||++++.++ +..+.+||+|++++|.|..+... +.
T Consensus 125 ~~Y~r~-gnp-t~~aLE~~lA~leg----~e~ai~--~~SG~aAi~~i---l~ll~~GD~VI~~~~~y~~t~~ll~~~l~ 193 (464)
T PLN02509 125 YDYTRS-GNP-TRDALESLLAKLDK----ADRAFC--FTSGMAALSAV---THLIKNGEEIVAGDDVYGGSDRLLSQVVP 193 (464)
T ss_pred CccCCC-CCH-HHHHHHHHHHHHhC----CCEEEE--eCcHHHHHHHH---HHHhCCCCEEEEcCCchhhHHHHHHHHHH
Confidence 457654 543 45555555533222 256777 88888888665 34578999999999999988643 45
Q ss_pred hcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeecccccccc
Q 015435 145 LAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFA 224 (407)
Q Consensus 145 ~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~ 224 (407)
..|++++.++. .|++++++++. +++++|++ ++|+||||. ..++++|+++|++||+++|+|++|....
T Consensus 194 ~~G~~v~~vd~-------~d~e~l~~ai~--~~TklV~l-esPsNPtG~---i~Dl~~I~~lAk~~g~~lIVD~A~a~~~ 260 (464)
T PLN02509 194 RSGVVVKRVNT-------TNLDEVAAAIG--PQTKLVWL-ESPTNPRQQ---ISDIRKIAEMAHAQGALVLVDNSIMSPV 260 (464)
T ss_pred HCCeEEEEeCC-------CCHHHHHHhCC--cCCeEEEE-ECCCCCCCC---HHHHHHHHHHHHHcCCEEEEECCccccc
Confidence 77998888754 36889998886 66788777 999999999 5789999999999999999999975443
Q ss_pred CCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCC-cceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHH
Q 015435 225 SGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGER-VGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVAT 303 (407)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r-~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (407)
.. . +. . ....++++|++|.++.+|-- .|.+ ++.++.+..++ ...+.......+......+..
T Consensus 261 ~~----~--pl----~-~gaDivv~S~tK~l~G~gdv~gG~v--~~~~~~l~~~~----~~~~~~~g~~l~p~~A~l~lr 323 (464)
T PLN02509 261 LS----R--PL----E-LGADIVMHSATKFIAGHSDVMAGVL--AVKGEKLAKEV----YFLQNSEGSGLAPFDCWLCLR 323 (464)
T ss_pred cC----C--hh----h-cCCcEEEecCcccccCCCccceeEE--EeccHHHHHHH----HHHHHhcCCCcCHHHHHHHHh
Confidence 22 1 11 1 23468899999998765533 3555 44544433332 222221112233333333332
Q ss_pred HhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc---------------ccCCceeEEecCCCHHHHHHh
Q 015435 304 ILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSH---------------IIKQIGMFTFTGLNSEQVAFM 368 (407)
Q Consensus 304 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~ 368 (407)
.| +.+..+.++..++.+.+.+.|++.+.-..+.+ ....||++.|.--+.+.+.++
T Consensus 324 ~L----------~tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~~~~~~~~f 393 (464)
T PLN02509 324 GI----------KTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHL 393 (464)
T ss_pred hh----------hhHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeCCHHHHHHH
Confidence 22 33556677788888999999987642000000 112467776642244555555
Q ss_pred HhhccEEE---cCC-----------------------------C--eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 369 TKEYHIYM---TSD-----------------------------G--RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 369 l~~~gi~~---~~g-----------------------------g--Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
++...+.. .=| | |+|++- |+.+.+++-|.++|+.
T Consensus 394 ~~~l~l~~~a~slG~~~SLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvGl---E~~~DLi~Dl~~Al~~ 461 (464)
T PLN02509 394 VETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI---EDVDDLISDLDIAFRT 461 (464)
T ss_pred HHcCCcceEcccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHcc
Confidence 55544321 111 1 888873 8899999999998863
No 236
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.85 E-value=6e-19 Score=166.43 Aligned_cols=275 Identities=17% Similarity=0.194 Sum_probs=177.7
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHH----HHhhcCce
Q 015435 74 IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPK----VFTLAGLS 149 (407)
Q Consensus 74 ~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~----~~~~~G~~ 149 (407)
......|++.++++. +. +..++ +++|+.++.++ +..+.+||+|++++|.|.+... .+...|++
T Consensus 49 ~p~~~~Le~~lA~l~-g~-------~~~~~--~~sG~aai~~~---~~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~ 115 (377)
T PRK07671 49 NPTRAALEELIAVLE-GG-------HAGFA--FGSGMAAITAV---MMLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIE 115 (377)
T ss_pred ChHHHHHHHHHHHHh-CC-------CceEE--eCCHHHHHHHH---HHHhCCCCEEEECCCccchHHHHHHHHHhcCCeE
Confidence 344778899999987 43 34455 67777787765 3457899999999999985443 33457888
Q ss_pred eeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCC
Q 015435 150 VKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLD 229 (407)
Q Consensus 150 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~ 229 (407)
++.++. .|++++++++. ++++++++ ++|+||||.+. ++++|+++|+++|+++|+|++|.......
T Consensus 116 v~~v~~-------~d~~~l~~ai~--~~tklV~l-e~P~NPtg~~~---dl~~I~~la~~~g~~lvvD~a~~~~~~~~-- 180 (377)
T PRK07671 116 HTFVDT-------SNLEEVEEAIR--PNTKAIYV-ETPTNPLLKIT---DIKKISTIAKEKGLLTIVDNTFMTPYWQS-- 180 (377)
T ss_pred EEEECC-------CCHHHHHHhcC--CCCeEEEE-ECCCCCCCccc---CHHHHHHHHHHcCCEEEEECCCCccccCC--
Confidence 888854 38899999887 66788777 89999999865 68888888999999999999986543321
Q ss_pred chhHHHHHHHHcCCcEEEEEecCccccccCC-CcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcCh
Q 015435 230 ADAQSVRMFVADGGECLVAQSYAKNMGLYGE-RVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDS 308 (407)
Q Consensus 230 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 308 (407)
++ . ....++++|+||.++.++- -.|++ +++++++.++ +...+.......+......+...+
T Consensus 181 ----p~----~-~g~Divv~S~sK~l~G~~~~~~G~~--v~~~~~l~~~----~~~~~~~~g~~~~~~~a~l~~~~l--- 242 (377)
T PRK07671 181 ----PI----S-LGADIVLHSATKYLGGHSDVVAGLV--VVNSPELAED----LHFVQNSTGGILGPQDSWLLLRGL--- 242 (377)
T ss_pred ----hh----h-hCCeEEEecCcccccCCccceeEEE--EeCcHHHHHH----HHHHHHhhcCCCCHHHHHHHHcCc---
Confidence 11 1 1235999999999985543 33555 5666554444 333333322233443333333222
Q ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CC-----Cccc----ccCCceeEEecCCCHHHHHHhHhhcc
Q 015435 309 TMYKEWTLELKAMADRIISMRQQLFDALSARGT------PG-----DWSH----IIKQIGMFTFTGLNSEQVAFMTKEYH 373 (407)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~-----~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~g 373 (407)
+.+..+.++..++...+.+.|++.+. |. .... ....||++.+.--+.+.+.+++++..
T Consensus 243 -------~tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l~ 315 (377)
T PRK07671 243 -------KTLGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVGSEETANKVLERLQ 315 (377)
T ss_pred -------ChHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeCCHHHHHHHHHhCC
Confidence 23455667777888999999987642 10 0000 01235666653224455556665544
Q ss_pred EEE-cC--C-----------------------------C--eEEecCCCCCChhHHHHHHHHHHH
Q 015435 374 IYM-TS--D-----------------------------G--RISMAGLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 374 i~~-~~--g-----------------------------g--Ris~~~~~~e~i~~~~~~l~~~l~ 404 (407)
+.. .+ | + |||++- |+.+.+++-|+++|+
T Consensus 316 l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~ 377 (377)
T PRK07671 316 YFTLAESLGAVESLISIPSQMTHASIPADRRKELGITDGLIRISVGI---EDGEDLIEDLAQALA 377 (377)
T ss_pred cceEccCCCCCCeEeECCCccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHhC
Confidence 422 00 1 1 888873 788999999888763
No 237
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.85 E-value=4.7e-19 Score=169.63 Aligned_cols=160 Identities=16% Similarity=0.145 Sum_probs=125.4
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChH----HHHhhcCc
Q 015435 73 PIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHP----KVFTLAGL 148 (407)
Q Consensus 73 ~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~----~~~~~~G~ 148 (407)
+.....+|++++++++ +. +..++ ++||++++..++ ...+.+||+|+++.+.|.+.. ..+...|+
T Consensus 55 ~~p~~~~le~~lA~l~-g~-------~~~v~--~~sG~~Ai~~al--~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~ 122 (418)
T TIGR01326 55 MNPTTDVLEQRIAALE-GG-------VAALA--VASGQAAITYAI--LNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGI 122 (418)
T ss_pred CChhHHHHHHHHHHHh-CC-------CeEEE--EccHHHHHHHHH--HHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCc
Confidence 3445788999999988 43 56788 999999999884 455789999999999986543 34567899
Q ss_pred eeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCC
Q 015435 149 SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSL 228 (407)
Q Consensus 149 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~ 228 (407)
+++.++. .|++++++.+. ++++++++ .+|+||||.+.+ +++|+++|+++|+++|+|++|......
T Consensus 123 ~v~~v~~-------~d~~~l~~~l~--~~t~~V~l-e~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~~-- 187 (418)
T TIGR01326 123 EVRFVDP-------DDPEEFEKAID--ENTKAVFA-ETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYLC-- 187 (418)
T ss_pred EEEEECC-------CCHHHHHHhcC--cCCeEEEE-ECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhcC--
Confidence 9988864 27899999887 56777777 899999999774 788888899999999999998633211
Q ss_pred CchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeec
Q 015435 229 DADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCK 270 (407)
Q Consensus 229 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~ 270 (407)
. + + . ....+++.|+||.++.+|+|+||+ +++
T Consensus 188 --~--~---l-~-~g~Divv~S~sK~l~g~G~~lGg~--v~~ 218 (418)
T TIGR01326 188 --R--P---I-D-HGADIVVHSATKYIGGHGTAIGGV--IVD 218 (418)
T ss_pred --C--c---h-h-cCCeEEEECccccccCCccceEEE--EEe
Confidence 0 1 1 1 245799999999999999999998 454
No 238
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.85 E-value=9e-20 Score=171.91 Aligned_cols=262 Identities=19% Similarity=0.158 Sum_probs=170.9
Q ss_pred cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhh--cCC-CeEEecCCCCCChHHH---HhhcCcee
Q 015435 77 LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARH--YHQ-LTIYIPQPTWGNHPKV---FTLAGLSV 150 (407)
Q Consensus 77 ~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~--~~g-d~Vi~~~p~y~~~~~~---~~~~G~~~ 150 (407)
++++|+.+++++ +. ++++|++ |+|+|+++.+++..+... .+| +.|++....|+.+... ++..|+++
T Consensus 44 ~~~~r~~la~~~-g~-----~~~~v~~--~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v 115 (353)
T TIGR03235 44 VERARKQVAEAL-GA-----DTEEVIF--TSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTV 115 (353)
T ss_pred HHHHHHHHHHHh-CC-----CCCeEEE--eCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEE
Confidence 567888999887 42 2478999 999999999885333221 256 6788888777766544 34579999
Q ss_pred eEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCc
Q 015435 151 KTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDA 230 (407)
Q Consensus 151 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~ 230 (407)
+.++. +.++.+|++++++.+. ++++++++ ++++||||.+.+ +++|+++|+++|+++++|+++...... .
T Consensus 116 ~~v~~--~~~~~~d~~~l~~~l~--~~~~lv~~-~~~~n~tG~~~~---~~~I~~l~~~~~~~~ivD~a~~~g~~~-~-- 184 (353)
T TIGR03235 116 TYLPV--DESGRIDVDELADAIR--PDTLLVSI-MHVNNETGSIQP---IREIAEVLEAHEAFFHVDAAQVVGKIT-V-- 184 (353)
T ss_pred EEEcc--CCCCcCCHHHHHHhCC--CCCEEEEE-EcccCCceeccC---HHHHHHHHHHcCCEEEEEchhhcCCcc-c--
Confidence 99988 3456799999999886 55667666 899999999876 788888899999999999996533221 1
Q ss_pred hhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhH-HHHHHHHh--h-hhhcccCCCChhHHHHHHHHhc
Q 015435 231 DAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVA-SRVESQLK--L-VIRPMYSSPPIHGASIVATILK 306 (407)
Q Consensus 231 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~-~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~l~ 306 (407)
+ + ......+++.|.+|.++.+| +|++ +++++... ..+..... . ..+....+++.....++..+++
T Consensus 185 ~---~----~~~~~D~~~~s~~K~~gp~g--~g~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~ 253 (353)
T TIGR03235 185 D---L----SADRIDLISCSGHKIYGPKG--IGAL--VIRKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAE 253 (353)
T ss_pred c---c----cccCCCEEEeehhhcCCCCc--eEEE--EEccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHH
Confidence 1 1 11234577778899877555 6887 45532110 00000000 0 0011122444445555555554
Q ss_pred ChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC----CceeEEe--cCCCHHHHHHhHhhccEEEcCC
Q 015435 307 DSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIK----QIGMFTF--TGLNSEQVAFMTKEYHIYMTSD 379 (407)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~l~~~gi~~~~g 379 (407)
.. ....++.+++++++++++.+.|++.| +++..+ ..++..+ .+.+.+.+...|++ +|.+.+|
T Consensus 254 ~~------~~~~~~~~~~~~~l~~~l~~~l~~~g----~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~L~~-~i~v~~g 321 (353)
T TIGR03235 254 IA------RRNAQAWEVKLRAMRNQLRDALQTLG----VKLNGDPAETIPHILNFSIDGVNSEALIVNLRA-DAAVSTG 321 (353)
T ss_pred HH------HhhHHHHHHHHHHHHHHHHHHhccCC----eEEeCCcccccCCEEEEEeCCcCHHHHHHHHhC-CeEEEch
Confidence 21 23467788999999999999998866 444321 1222322 35677777777775 8999876
No 239
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.85 E-value=1.2e-18 Score=165.18 Aligned_cols=274 Identities=16% Similarity=0.204 Sum_probs=177.9
Q ss_pred CcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChH----HHHhhcCceee
Q 015435 76 GLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHP----KVFTLAGLSVK 151 (407)
Q Consensus 76 g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~----~~~~~~G~~~~ 151 (407)
...++++.++++. +. ++.++ +++|+.++.+++ ..+.+||+|++++|.|.+.. ..++..|++++
T Consensus 55 ~~~~le~~lA~l~-g~-------~~~v~--~~sG~~ai~~~l---~~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~ 121 (390)
T PRK08064 55 TREALEDIIAELE-GG-------TKGFA--FASGMAAISTAF---LLLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHT 121 (390)
T ss_pred hHHHHHHHHHHHh-CC-------CCeEE--ECCHHHHHHHHH---HHhCCCCEEEEccCccchHHHHHHHHHHHcCCEEE
Confidence 3778899999987 43 33455 677788887773 35789999999999998544 34456899999
Q ss_pred EEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCch
Q 015435 152 TYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDAD 231 (407)
Q Consensus 152 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~ 231 (407)
.++. .|++++++.+. ++++++++ ++|+||||.+. ++++|+++|+++|+++|+|++|..+....
T Consensus 122 ~v~~-------~d~~~l~~~l~--~~tklV~l-~~p~NptG~~~---dl~~I~~la~~~g~~vvvD~a~~~~~~~~---- 184 (390)
T PRK08064 122 FVDM-------TNLEEVAQNIK--PNTKLFYV-ETPSNPLLKVT---DIRGVVKLAKAIGCLTFVDNTFLTPLLQK---- 184 (390)
T ss_pred EECC-------CCHHHHHHhcC--CCceEEEE-ECCCCCCcEec---cHHHHHHHHHHcCCEEEEECCCCcccccC----
Confidence 8865 26888998887 56777777 89999999976 57788888999999999999987554321
Q ss_pred hHHHHHHHHcCCcEEEEEecCcccccc-CCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhh
Q 015435 232 AQSVRMFVADGGECLVAQSYAKNMGLY-GERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTM 310 (407)
Q Consensus 232 ~~~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 310 (407)
++ . ....+++.|++|.++.+ |...|++ ++.++++.++ +......+....+......+ +...
T Consensus 185 --~~----~-~g~Divv~S~tK~~~G~~~~laG~~--v~~~~~~~~~----l~~~~~~~g~~~~~~~a~l~---~~gl-- 246 (390)
T PRK08064 185 --PL----D-LGADVVLHSATKFLAGHSDVLAGLA--VVKDEELAQK----LYFLQNSFGAVLGVQDCWLV---LRGL-- 246 (390)
T ss_pred --ch----h-hCCcEEEeecceeccCCccceeEEE--EeCCHHHHHH----HHHHHHhcCCCCCHHHHHHH---Hccc--
Confidence 11 1 12458899999998633 3455777 4665554444 43343333223333333332 2222
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CC-----Ccccc----cCCceeEEecCCCHHHHHHhHhhccE-
Q 015435 311 YKEWTLELKAMADRIISMRQQLFDALSARGT------PG-----DWSHI----IKQIGMFTFTGLNSEQVAFMTKEYHI- 374 (407)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~-----~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~gi- 374 (407)
+.+..+.++..++...+.+.|++.+. |. .+... ...||++.+.--+.+.+..++++.++
T Consensus 247 -----~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l~ 321 (390)
T PRK08064 247 -----KTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSEEAVRQFVSHVKLP 321 (390)
T ss_pred -----CcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCCcc
Confidence 23455556667788888888887642 10 01111 12455655431144556677777666
Q ss_pred --EEcCC-----------------------------C--eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 375 --YMTSD-----------------------------G--RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 375 --~~~~g-----------------------------g--Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
.++-| | |+|++- |+.+.+++.|.+++++
T Consensus 322 ~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGl---e~~~dli~dl~~Al~~ 382 (390)
T PRK08064 322 VFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGL---ENVDDLIADFEQALSY 382 (390)
T ss_pred eEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHh
Confidence 22212 1 888884 7788888888888764
No 240
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=1.7e-18 Score=165.47 Aligned_cols=156 Identities=15% Similarity=0.124 Sum_probs=120.4
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHh----hcCce
Q 015435 74 IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFT----LAGLS 149 (407)
Q Consensus 74 ~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~----~~G~~ 149 (407)
......|+++++++. +. +..++ +++|++|+.+++ ...+.+||+|+++.+.|.+....+. ..|++
T Consensus 57 ~pt~~~Le~~lA~l~-g~-------~~~l~--~ssG~~Ai~~al--~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~ 124 (425)
T PRK06084 57 NPTNDVLEQRVAALE-GG-------VGALA--VASGMAAITYAI--QTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIE 124 (425)
T ss_pred CchHHHHHHHHHHHh-CC-------CceeE--ehhHHHHHHHHH--HHHhCCCCEEEEeCCCcchHHHHHHHhcccceeE
Confidence 344678899999987 42 45677 899999999984 4457899999999999986655544 24666
Q ss_pred eeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCC
Q 015435 150 VKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLD 229 (407)
Q Consensus 150 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~ 229 (407)
+..++. .|++++++.+. ++++++++ ++|+||||.+++ +++|+++|+++|+++|+|++|+.....
T Consensus 125 v~~~d~-------~d~e~le~ai~--~~tklV~l-esp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~~--- 188 (425)
T PRK06084 125 TRFAAH-------DDIAALEALID--ERTKAVFC-ESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVLC--- 188 (425)
T ss_pred EEEECC-------CCHHHHHHHhc--cCCcEEEE-eCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC---
Confidence 655532 48899999987 56788777 899999999886 788888899999999999998643321
Q ss_pred chhHHHHHHHHcCCcEEEEEecCccccccCCCccee
Q 015435 230 ADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGAL 265 (407)
Q Consensus 230 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 265 (407)
. + + . ....+++.|++|.++.+|.++|.+
T Consensus 189 -~--p---~-~-~gaDivv~S~tK~l~G~g~~~gG~ 216 (425)
T PRK06084 189 -R--P---F-E-HGADIVVHSLTKYIGGHGTSIGGI 216 (425)
T ss_pred -C--h---h-h-cCCCEEEECchhcccccccceeEE
Confidence 1 1 1 1 234599999999999999999987
No 241
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=1.2e-18 Score=165.38 Aligned_cols=280 Identities=14% Similarity=0.109 Sum_probs=183.5
Q ss_pred CCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHH----HhhcCcee
Q 015435 75 VGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKV----FTLAGLSV 150 (407)
Q Consensus 75 ~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~----~~~~G~~~ 150 (407)
+....|.+.++++. +. +..+. ++||+.|+.+++ ...+.+||+|+++.++|.+.... +...|+++
T Consensus 61 Ptv~~lE~~la~le-g~-------~~av~--~~SG~aAi~~al--~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v 128 (432)
T PRK06702 61 PTLAAFEQKLAELE-GG-------VGAVA--TASGQAAIMLAV--LNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDV 128 (432)
T ss_pred cHHHHHHHHHHHHh-CC-------CcEEE--ECCHHHHHHHHH--HHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEE
Confidence 34778889999987 43 46777 999999999984 55588999999999999877665 67889999
Q ss_pred eEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCc
Q 015435 151 KTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDA 230 (407)
Q Consensus 151 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~ 230 (407)
+.++. .+|+++++++++ +++++|++ .+|+|||+.+.+ +++|+++|+++|+++|+|++|..-..
T Consensus 129 ~~vd~------~~d~~~l~~~I~--~~Tk~I~~-e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~~----- 191 (432)
T PRK06702 129 TFFNP------NLTADEIVALAN--DKTKLVYA-ESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPYL----- 191 (432)
T ss_pred EEECC------CCCHHHHHHhCC--cCCeEEEE-EcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchhh-----
Confidence 88843 268899999998 67888887 789999999775 88888899999999999999741111
Q ss_pred hhHHHHHHHHcCCcEEEEEecCccc-----cccCCCc-----ceeEEeecChhhHH-----------------H-HHHHH
Q 015435 231 DAQSVRMFVADGGECLVAQSYAKNM-----GLYGERV-----GALSIVCKTEDVAS-----------------R-VESQL 282 (407)
Q Consensus 231 ~~~~~~~~~~~~~~~i~~~s~sK~~-----~~~G~r~-----G~~~~v~~~~~~~~-----------------~-~~~~~ 282 (407)
...+ .....|++.|+||.+ +++|.++ +|. ..+++++.+ . +....
T Consensus 192 ----~~pl--~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (432)
T PRK06702 192 ----CQAF--EHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWT--NGKYPELVEPDPSYHGVSYVQNFGAAAYIVKAR 263 (432)
T ss_pred ----CChh--hcCCCEEEEccccccCCCcceeceEEEeCCCcccc--cccccccccccccccccchhhccchhhHHHHHH
Confidence 0001 123459999999955 4444444 343 122222111 0 11111
Q ss_pred hhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc---------------
Q 015435 283 KLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSH--------------- 347 (407)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--------------- 347 (407)
....+....+.++.....+...|+.. +.+.++..++...+.+.|++.+.-..+.+
T Consensus 264 ~~~~~~~g~~~sp~~a~l~~rgL~Tl----------~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~ 333 (432)
T PRK06702 264 VQLLRDYGNCMSPFNAYISNIGLETL----------HLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKY 333 (432)
T ss_pred HHHHHHccCCCCHHHHHHHHhccCcH----------HHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHh
Confidence 11222333466777777777666643 34445556888888888887652000000
Q ss_pred c-cCCceeEEec-CCCHHHHHHhHhhccEEEc---CC-----------------------------C--eEEecCCCCCC
Q 015435 348 I-IKQIGMFTFT-GLNSEQVAFMTKEYHIYMT---SD-----------------------------G--RISMAGLSSKT 391 (407)
Q Consensus 348 ~-~~~~~~~~~~-~~~~~~~~~~l~~~gi~~~---~g-----------------------------g--Ris~~~~~~e~ 391 (407)
. ..-||++.+. .-+.+.+.++++.-.++.. =| | |+|++- |+
T Consensus 334 ~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGl---Ed 410 (432)
T PRK06702 334 LKKGASGVLTFGIKGGLEAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGI---ED 410 (432)
T ss_pred CcCCCceEEEEEecCCHHHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEecc---CC
Confidence 0 1135666654 2244555555554333221 01 1 888873 88
Q ss_pred hhHHHHHHHHHHH
Q 015435 392 VPHLTDAIHAAVT 404 (407)
Q Consensus 392 i~~~~~~l~~~l~ 404 (407)
.+.+++-|.++|+
T Consensus 411 ~eDLi~Dl~~Al~ 423 (432)
T PRK06702 411 VSDIIADLEAALV 423 (432)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999885
No 242
>PRK05968 hypothetical protein; Provisional
Probab=99.84 E-value=2e-18 Score=163.71 Aligned_cols=213 Identities=15% Similarity=0.155 Sum_probs=144.4
Q ss_pred CCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChH----HHHhhcCcee
Q 015435 75 VGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHP----KVFTLAGLSV 150 (407)
Q Consensus 75 ~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~----~~~~~~G~~~ 150 (407)
....++++++++++ +. +..++ +++|+.|+.+++ ...+.+||+|+++.+.|.... ..+...|+++
T Consensus 63 p~~~~le~~lA~l~-g~-------~~av~--~~sG~~Ai~~al--~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v 130 (389)
T PRK05968 63 PTVRAFEEMLAKLE-GA-------EDARG--FASGMAAISSTV--LSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEV 130 (389)
T ss_pred hhHHHHHHHHHHHh-CC-------CcEEE--ECCHHHHHHHHH--HHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceE
Confidence 34678999999987 53 34566 777788998874 445789999999999998644 4556789999
Q ss_pred eEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCc
Q 015435 151 KTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDA 230 (407)
Q Consensus 151 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~ 230 (407)
+.++. .|++++++.+. +++++++ . ||||.+++..++++|+++|++||+++|+|++|.......
T Consensus 131 ~~vd~-------~d~~~l~~~i~---~tklV~i-e---~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~--- 193 (389)
T PRK05968 131 DYVDG-------RDEEAVAKALP---GAKLLYL-E---SPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQR--- 193 (389)
T ss_pred EEeCC-------CCHHHHHHhcc---cCCEEEE-E---CCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccC---
Confidence 88854 27888888763 5677777 4 455555668999999999999999999999987654321
Q ss_pred hhHHHHHHHHcCCcEEEEEecCccccccC-CCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChh
Q 015435 231 DAQSVRMFVADGGECLVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDST 309 (407)
Q Consensus 231 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 309 (407)
++ . ....+++.|+||.++.+| .+.|++ +.++++.+++...... ......+...+..+...|+.
T Consensus 194 ---p~----~-~g~Divv~S~tK~l~g~~~~~gG~i---~~~~~~~~~l~~~~~~---~~g~~~~~~~A~~~l~~L~t-- 257 (389)
T PRK05968 194 ---PI----T-LGVDLVIHSASKYLGGHSDTVAGVV---AGSKEHIARINAEAYP---YLGAKLSPFEAWLLLRGLRT-- 257 (389)
T ss_pred ---ch----h-cCCcEEEeeccccccCCCCeEEEEE---EECHHHHHHHHHHHHH---hCCCCCChHHHHHHHcccCc--
Confidence 11 1 123578889999998765 466766 4555544444332111 11223444444444444442
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015435 310 MYKEWTLELKAMADRIISMRQQLFDALSARG 340 (407)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 340 (407)
+....++..++.+.+.+.|++.+
T Consensus 258 --------l~~r~~~~~~~a~~la~~L~~~p 280 (389)
T PRK05968 258 --------LPLRMKAHEASALEIARRLKAHP 280 (389)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHhCC
Confidence 34455556667788888888765
No 243
>PRK06541 hypothetical protein; Provisional
Probab=99.84 E-value=1.7e-18 Score=167.10 Aligned_cols=346 Identities=12% Similarity=0.084 Sum_probs=210.6
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccc--cCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVK--EYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
...++++||+..|....+.| ..++.+++++.+++. ...... .| ......++.+.+++.. .. ..+.+++
T Consensus 48 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~Av~~q~~-~~~~~~~~~~-~~~~~~~la~~l~~~~-p~-----~~~~v~f- 117 (460)
T PRK06541 48 DDRGKRYLDGLAGLFVVQVG-HGRAELAEAAAKQAG-TLAFFPLWSY-AHPPAIELAERLAALA-PG-----DLNRVFF- 117 (460)
T ss_pred eCCCCEEEECCccHHhccCC-CCCHHHHHHHHHHHh-hCcCcccccc-CCHHHHHHHHHHHHhC-CC-----CcCEEEE-
Confidence 45679999999997656677 667888888888886 111111 12 1222344555555543 11 1268999
Q ss_pred ecCCcccHHHHHHHHHHhhc------CCCeEEecCCCCCChHHHHhhc-Cc------------eeeEEEeecCCC---CC
Q 015435 105 QCLSGTGSLRVGAEFLARHY------HQLTIYIPQPTWGNHPKVFTLA-GL------------SVKTYRYYDPAT---RG 162 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~------~gd~Vi~~~p~y~~~~~~~~~~-G~------------~~~~v~~~~~~~---~~ 162 (407)
+++|++|++.++++.+... ...+|+...-+|++........ |. .+..+|..+... ++
T Consensus 118 -~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 196 (460)
T PRK06541 118 -TTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELG 196 (460)
T ss_pred -cCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccC
Confidence 9999999999998877652 1357888888887765433321 11 122233211000 11
Q ss_pred cC--------hhhHHHHHHcC-CCCcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHHcCceeeeccccccccCCCCCchh
Q 015435 163 LN--------FQGLLEDLRAA-PSGAIVLLHACAHNPTGVDP-TLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADA 232 (407)
Q Consensus 163 ~d--------~~~l~~~i~~~-~~~~~v~i~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~ 232 (407)
-+ ++.+++.+... ++..+.+++...++++|.+. +.+.+++|.++|++||+++|+||++.+|+..+ ..
T Consensus 197 ~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G---~~ 273 (460)
T PRK06541 197 DDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLG---EM 273 (460)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---hh
Confidence 12 25677777532 33444445344488889875 58999999999999999999999998886543 22
Q ss_pred HHHHHHHHcCCcEEEEEecCccccccCC-CcceeEEeecChhhHHHHHHHHhhh----hhcccCCCChhHHHHHHHHhcC
Q 015435 233 QSVRMFVADGGECLVAQSYAKNMGLYGE-RVGALSIVCKTEDVASRVESQLKLV----IRPMYSSPPIHGASIVATILKD 307 (407)
Q Consensus 233 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~-r~G~~~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~ 307 (407)
+....+.- ..+++ +++|.++ .|+ ++|++ +++ +++.+.+... ....+.+.+++++.++.+.++.
T Consensus 274 ~a~~~~gv-~PDiv---t~gK~l~-~G~~pigav--~~~-----~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~ 341 (460)
T PRK06541 274 FGCERFGY-VPDII---TCAKGIT-SGYSPLGAM--IAS-----DRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDI 341 (460)
T ss_pred hhhhhcCC-CCCEE---Eeccccc-CCccceeEE--EEc-----HHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHH
Confidence 23222211 12333 4899999 787 99999 565 3343333211 1123446677777777776653
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEec---C------CCH--------HHHHHhHh
Q 015435 308 STMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFT---G------LNS--------EQVAFMTK 370 (407)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~---~------~~~--------~~~~~~l~ 370 (407)
.. -+...++++++.++|.+.|+++.....+..+...|.++.+- + ++. ..+...+.
T Consensus 342 l~--------~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 413 (460)
T PRK06541 342 FE--------REGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALF 413 (460)
T ss_pred HH--------hccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHH
Confidence 21 12455778888888888888763110122234455555432 1 100 12334455
Q ss_pred hccEEEcCC--C----eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 371 EYHIYMTSD--G----RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 371 ~~gi~~~~g--g----Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
++||.+.+. | ||+..- ++++++++++++|.++++++
T Consensus 414 ~~Gi~~~~~~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06541 414 EAGLYCRADDRGDPVVQLAPPLISGQEEFDEIEQILRSVLTEA 456 (460)
T ss_pred hCCeEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 689999763 3 676552 48899999999999998753
No 244
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.84 E-value=1.6e-18 Score=166.87 Aligned_cols=346 Identities=16% Similarity=0.080 Sum_probs=208.4
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC 106 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t 106 (407)
...+++++|+..|....+.| ..++++++++.+++. .......|.+.....++.+++++...+ ..+.+++ +
T Consensus 78 D~dG~~ylD~~~g~~~~~lG-H~~p~v~~Ai~~ql~-~l~~~~~~~~~~~~~~lae~L~~~~p~------~~~~v~f--~ 147 (459)
T PRK11522 78 DTQGQEFIDCLGGFGIFNVG-HRNPVVVSAVQNQLA-KQPLHSQELLDPLRAMLAKTLAALTPG------KLKYSFF--C 147 (459)
T ss_pred ECCCCEEEECCcCHHhhhcC-CCCHHHHHHHHHHHh-hCcccccccCCHHHHHHHHHHHHhCCC------CCCEEEE--e
Confidence 34578999999886555677 667788888888886 222222233333344555555554411 1267999 9
Q ss_pred CCcccHHHHHHHHHHhhcC--C-CeEEecCCCCCChHHHHhhc-CceeeE---EEeecCCC---CCcChhhHHHHHHc--
Q 015435 107 LSGTGSLRVGAEFLARHYH--Q-LTIYIPQPTWGNHPKVFTLA-GLSVKT---YRYYDPAT---RGLNFQGLLEDLRA-- 174 (407)
Q Consensus 107 ~g~t~a~~~~~~~~~~~~~--g-d~Vi~~~p~y~~~~~~~~~~-G~~~~~---v~~~~~~~---~~~d~~~l~~~i~~-- 174 (407)
+||++|++.++++.+.... | ..|+...-+|++........ |..... .|.. +.- ...|.+++++.+..
T Consensus 148 ~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~l~~~~ 226 (459)
T PRK11522 148 NSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLL-PGFRHVPFGNIEAMRTALSECK 226 (459)
T ss_pred CCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCC-CCCcccCCCCHHHHHHHHHHhh
Confidence 9999999999988877653 3 36888888888776544322 211100 1110 000 01266777777752
Q ss_pred -C-CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEec
Q 015435 175 -A-PSGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSY 251 (407)
Q Consensus 175 -~-~~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 251 (407)
. .+..++++ -....-.|.+ .+.+.++++.++|++||+++|+||++.+|+..+ ..+....+.- ..+++ ++
T Consensus 227 ~~~~~iAavIv-Epv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG---~~~a~e~~gv-~PDiv---t~ 298 (459)
T PRK11522 227 KTGDDVAAVIL-EPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTG---KMFACEHENV-QPDIL---CL 298 (459)
T ss_pred ccCCcEEEEEE-ecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccc---hhhhhhccCC-CCCEE---Ee
Confidence 1 22344555 3333344664 678899999999999999999999998887654 2333332221 12222 68
Q ss_pred CccccccC-CCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHH
Q 015435 252 AKNMGLYG-ERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQ 330 (407)
Q Consensus 252 sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (407)
+|.+| .| +++|.+ ++. +++.+.+.. ..+....+++.+++++.++.+.|+... + +.+.++++++.+
T Consensus 299 gK~lg-gG~~Pigav--~~~-~~i~~~~~~--~~~~~~~T~~gnp~~~Aaala~L~~i~------~--~~l~~~~~~~g~ 364 (459)
T PRK11522 299 AKALG-GGVMPIGAT--IAT-EEVFSVLFD--NPFLHTTTFGGNPLACAAALATINVLL------E--QNLPAQAEQKGD 364 (459)
T ss_pred chhhh-CCCccceeE--EEc-HHHHHHhcc--CCcccCCCCCCCHHHHHHHHHHHHHHh------c--chHHHHHHHHHH
Confidence 99998 67 689998 565 333332211 111223344668888888877776331 1 245577778888
Q ss_pred HHHHHHHhcC--CCCCcccccCCceeEEecCC-C---HHHHHHhHhhccEEEcCC---C---eEEecC-CCCCChhHHHH
Q 015435 331 QLFDALSARG--TPGDWSHIIKQIGMFTFTGL-N---SEQVAFMTKEYHIYMTSD---G---RISMAG-LSSKTVPHLTD 397 (407)
Q Consensus 331 ~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~l~~~gi~~~~g---g---Ris~~~-~~~e~i~~~~~ 397 (407)
+|.+.|+++. .+..+.-+...|.++ -+.+ + ...+...+.++||.+.+. + |+...- +++++++++++
T Consensus 365 ~l~~~L~~l~~~~~~~i~~VrG~Gl~~-giel~~~~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~l~ 443 (459)
T PRK11522 365 YLLDGFRQLAREYPDLVQEARGKGMLM-AIEFVDNEIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCEQVLK 443 (459)
T ss_pred HHHHHHHHHHHhCCCceeeEEeceeEE-EEEecCchHHHHHHHHHHHCCeEEEecCCCCCEEEEECCccCCHHHHHHHHH
Confidence 8888887763 111111122333333 2322 1 223444455589999764 2 665543 58899999999
Q ss_pred HHHHHHHhh
Q 015435 398 AIHAAVTRM 406 (407)
Q Consensus 398 ~l~~~l~~~ 406 (407)
++.++++++
T Consensus 444 ~l~~~l~~~ 452 (459)
T PRK11522 444 AARKALAAM 452 (459)
T ss_pred HHHHHHHHH
Confidence 999998754
No 245
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.84 E-value=1.1e-18 Score=169.85 Aligned_cols=324 Identities=13% Similarity=0.091 Sum_probs=195.1
Q ss_pred cccchhHHHHHHHHhccccccccC---CCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHH-Hhh
Q 015435 48 PLVLNVVRKAEQLLVNDQSRVKEY---LPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFL-ARH 123 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~y---~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~-~~~ 123 (407)
..|+.+++.+.+... -...+.| ....|..+++.++.+++....+. +++.+..++|+++.+..+..+. ...
T Consensus 81 ~~~p~i~~~~~~~~~--~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~----~~~~l~~~~GA~a~~~~l~~~r~~~~ 154 (481)
T PRK04366 81 KYNPKINEKVARLPG--FAELHPLQPEETVQGALELMYELQEWLKEITGM----DAVTLQPAAGAHGELTGLLMIRAYHE 154 (481)
T ss_pred CCCHHHHHHHHhCcc--hhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCC----CceEEEeCcHHHHHHHHHHHHHHHhh
Confidence 456566666655422 1245667 34668788888877777444332 2444422444444444332111 224
Q ss_pred cCCC----eEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHH
Q 015435 124 YHQL----TIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQ 199 (407)
Q Consensus 124 ~~gd----~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~ 199 (407)
.+|| +|++++|.|+.+...++..|++++.+++ +.++.+|++++++.+. ++++++++ ++|+ |||.+ ..+
T Consensus 155 ~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~--~~~~~~D~e~L~~~i~--~~t~~V~v-~~Pn-~tG~~--~~d 226 (481)
T PRK04366 155 ARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPS--NEDGLVDLEALKAAVG--EDTAALML-TNPN-TLGLF--ERN 226 (481)
T ss_pred ccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeec--CCCCCcCHHHHHhhcc--cCCeEEEE-eCCC-Ccccc--chH
Confidence 5666 9999999999999999999999999998 3457899999999987 56777777 7777 99964 458
Q ss_pred HHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCcccccc----CCCcceeEEeecChhhH
Q 015435 200 WEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLY----GERVGALSIVCKTEDVA 275 (407)
Q Consensus 200 l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~v~~~~~~~ 275 (407)
+++|+++|+++|+++++|+++.....+-. .. ......++++|.+|.++.| |..+|++ .+. +++.
T Consensus 227 l~eI~~~a~~~gal~iVD~a~~~~~~g~~-----~~----~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l--~~~-~~~~ 294 (481)
T PRK04366 227 ILEIAEIVHEAGGLLYYDGANLNAILGKA-----RP----GDMGFDVVHLNLHKTFSTPHGGGGPGSGPV--GVK-EELA 294 (481)
T ss_pred HHHHHHHHHHcCCEEEEEecChhhhcccC-----Cc----cccCCCEEEEechhhcCCCCCCCCCCeeee--eeh-hhhH
Confidence 99999999999999999999742211100 01 1123568888999988644 3456777 344 2222
Q ss_pred HHHHHHH---h------------hhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015435 276 SRVESQL---K------------LVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARG 340 (407)
Q Consensus 276 ~~~~~~~---~------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 340 (407)
+.+...+ . .+.+....+.+.+...++..++.... .+.+++..++..++.+++.+.|.++
T Consensus 295 ~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G-----~~Gl~~~a~~~~~~a~~l~~~L~~~- 368 (481)
T PRK04366 295 PFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLG-----AEGLREVSEDAVLNANYLKARLKDI- 368 (481)
T ss_pred hhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhHhh-
Confidence 2221000 0 00011111112222333333332211 1345566677788899999999875
Q ss_pred CCCCcccccCC--ceeEEec-----CCCHHHHHHhHhhccEEEcC-------CC--eEEecC-CCCCChhHHHHHHHHHH
Q 015435 341 TPGDWSHIIKQ--IGMFTFT-----GLNSEQVAFMTKEYHIYMTS-------DG--RISMAG-LSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 341 ~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~~l~~~gi~~~~-------gg--Ris~~~-~~~e~i~~~~~~l~~~l 403 (407)
.. +.+..+. ...|.+. +.+...+.+.|.++||.+.. .+ |+++.. .+++|++++++.|+++.
T Consensus 369 ~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i~ 446 (481)
T PRK04366 369 YD--LPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQIA 446 (481)
T ss_pred Cc--ccCCCCeeEEEEEECccccccCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHHHH
Confidence 21 2211111 1222221 23556666666778987651 22 777754 36799999999999987
Q ss_pred Hh
Q 015435 404 TR 405 (407)
Q Consensus 404 ~~ 405 (407)
++
T Consensus 447 ~~ 448 (481)
T PRK04366 447 EE 448 (481)
T ss_pred HH
Confidence 65
No 246
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.84 E-value=1.6e-18 Score=165.65 Aligned_cols=337 Identities=16% Similarity=0.092 Sum_probs=205.4
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC 106 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t 106 (407)
...+++++|+..|....+.| ..++.+++++.+++. .......|.......++.+++++...+. .+.+++ +
T Consensus 71 D~dG~~ylD~~~g~~~~~lG-h~hp~v~~Av~~ql~-~l~~~~~~~~~~~~~~lAe~L~~~~p~~------~~~v~f--~ 140 (442)
T TIGR03372 71 DTQGNEFIDCLGGFGIFNVG-HRNPNVIAAVENQLA-KQPLHSQELLDPLRALLAKTLAALTPGK------LKYSFF--C 140 (442)
T ss_pred ECCCCEEEECCccHHhhhcC-CCCHHHHHHHHHHHH-hCCCcccccCCHHHHHHHHHHHHhCCCC------cCEEEE--e
Confidence 35678999999885545667 667788888888886 2222223333334455666666554211 157889 9
Q ss_pred CCcccHHHHHHHHHHhhc--CC-CeEEecCCCCCChHHHHhhcCce-------------eeEEEeecCCCCCcChhhHHH
Q 015435 107 LSGTGSLRVGAEFLARHY--HQ-LTIYIPQPTWGNHPKVFTLAGLS-------------VKTYRYYDPATRGLNFQGLLE 170 (407)
Q Consensus 107 ~g~t~a~~~~~~~~~~~~--~g-d~Vi~~~p~y~~~~~~~~~~G~~-------------~~~v~~~~~~~~~~d~~~l~~ 170 (407)
+||++|++.++++.+... .| .+|+...-+|++..........+ +..+|. .|.+.+++
T Consensus 141 ~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~-------~d~~~~~~ 213 (442)
T TIGR03372 141 NSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF-------GDIEAMLK 213 (442)
T ss_pred CCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC-------CCHHHHHH
Confidence 999999999998887764 23 57888888888776544332111 112221 25677777
Q ss_pred HHHc---CCC-CcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcE
Q 015435 171 DLRA---APS-GAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245 (407)
Q Consensus 171 ~i~~---~~~-~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (407)
.+.. .+. ..++++ .......|.. .+++.++++.++|++||+++|+||++.+|+..+ ..+....+.- ..++
T Consensus 214 ~l~~~~~~~~~vAavIv-Epv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG---~~~a~e~~gv-~PDi 288 (442)
T TIGR03372 214 ALNECKKTGDDVAAIIL-EPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTG---KMFACEHEGV-QPDI 288 (442)
T ss_pred HHHHHhcCCCcEEEEEE-eCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccc---cchhhhhcCC-CCCe
Confidence 6642 222 344444 3333344654 578899999999999999999999998887654 3334333321 1223
Q ss_pred EEEEecCccccccC-CCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHH
Q 015435 246 LVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADR 324 (407)
Q Consensus 246 i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (407)
+ +++|.+| .| +++|.+ ++. +++.+.+.. .......+++.+++++.++.+.|+-.. + +.+.++
T Consensus 289 v---t~gK~lg-~G~~Pigav--v~~-~~i~~~~~~--~~~~~~~T~~gnp~~~Aaa~a~L~~i~------~--~~l~~~ 351 (442)
T TIGR03372 289 L---CLAKALG-GGVMPIGAT--IAT-EAVFSVLFD--NPFLHTTTFGGNPLACAAALATINELL------E--KNLPAQ 351 (442)
T ss_pred e---eehhhhc-CCcccceEE--Eec-HHHHHhhhc--cCccccCCCCCCHHHHHHHHHHHHHHH------h--ccHHHH
Confidence 3 3899998 67 689998 555 443333311 111222344667888888887776321 1 234456
Q ss_pred HHHHHHHHHHHHHhcCC--CCCcccccCCceeEEecCC--C--HHHHHHhHhhccEEEcCC---C---eEEecC-CCCCC
Q 015435 325 IISMRQQLFDALSARGT--PGDWSHIIKQIGMFTFTGL--N--SEQVAFMTKEYHIYMTSD---G---RISMAG-LSSKT 391 (407)
Q Consensus 325 ~~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~~--~--~~~~~~~l~~~gi~~~~g---g---Ris~~~-~~~e~ 391 (407)
.+++.+++.+.|+++.. +..+.-....|.++ -+.+ + ...+...+.++||.+.+. + ||...- +++++
T Consensus 352 ~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~-giel~~~~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~ 430 (442)
T TIGR03372 352 AAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLM-AIEFRDNEIGYAFAKELFQQNILVAGTLNNAKSIRIEPPLTITIEQ 430 (442)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEecceEEE-EEEeCChHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCcccCHHH
Confidence 66777777777776531 11111123334333 3333 1 223444455589998753 2 665543 58899
Q ss_pred hhHHHHHHHHHH
Q 015435 392 VPHLTDAIHAAV 403 (407)
Q Consensus 392 i~~~~~~l~~~l 403 (407)
++++++++.+++
T Consensus 431 id~~~~~l~~~~ 442 (442)
T TIGR03372 431 CALVIKAAKDAL 442 (442)
T ss_pred HHHHHHHHHHhC
Confidence 999999998764
No 247
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.84 E-value=5.8e-18 Score=159.34 Aligned_cols=281 Identities=13% Similarity=0.106 Sum_probs=180.4
Q ss_pred ccCCC--CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHH----
Q 015435 69 KEYLP--IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKV---- 142 (407)
Q Consensus 69 ~~y~~--~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~---- 142 (407)
..|+. .+....|+++++++. +. +++++ ++||++|+..++ ...+.+||+|++++|.|.+....
T Consensus 42 ~~Y~r~gnPt~~~lE~~lA~l~-g~-------~~~~~--~~sG~~Ai~~al--~all~~GD~Vl~~~~~y~~t~~~~~~~ 109 (377)
T TIGR01324 42 LTYGRRGTLTHFALQDAMCELE-GG-------AGCYL--YPSGLAAVTNSI--LAFVKAGDHVLMVDSAYEPTRYFCDIV 109 (377)
T ss_pred CcccCCCCccHHHHHHHHHHHh-CC-------CcEEE--ECcHHHHHHHHH--HHhcCCCCEEEEcCCCcHHHHHHHHHH
Confidence 44654 123468999999987 53 68888 999999999984 55588999999999999877653
Q ss_pred HhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeecccccc
Q 015435 143 FTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQG 222 (407)
Q Consensus 143 ~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~ 222 (407)
....|+++..++. . +.+.+++.+. ++++++++ .+|+||||. ..++++|+++|+++|+++|+|++|+.
T Consensus 110 ~~~~gi~v~~~d~---~----~~e~l~~~i~--~~tklV~l-esp~Np~g~---~~dl~~I~~la~~~g~~livD~t~a~ 176 (377)
T TIGR01324 110 LKRMGVDITYYDP---L----IGEDIATLIQ--PNTKVLFL-EAPSSITFE---IQDIPAIAKAARNPGIVIMIDNTWAA 176 (377)
T ss_pred HHhcCcEEEEECC---C----CHHHHHHhcC--CCceEEEE-ECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCcc
Confidence 3467888776643 1 2277888776 66787777 899999988 67899999999999999999999864
Q ss_pred ccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccC-CCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHH
Q 015435 223 FASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIV 301 (407)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (407)
..... + ...+..++++|++|.++.+| ...|++ +.+++..+++.. .........++.....+
T Consensus 177 g~~~~------p-----l~~gaDivv~S~tK~l~G~~d~~gG~v---~~~~~~~~~l~~----~~~~~G~~l~p~~a~~~ 238 (377)
T TIGR01324 177 GLLFK------P-----LEHGVDISIQAGTKYLVGHSDIMIGTV---VANARTWDQLRE----HSYLMGQMVDADDAYTT 238 (377)
T ss_pred ccccC------c-----cccCceEEEecCceeccCCCCceEEEE---EeCHHHHHHHHH----HHHHhCCCCCHHHHHHH
Confidence 33210 1 11234689999999997544 455666 445554444332 22222234444444444
Q ss_pred HHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CC-----Cccc----ccCCceeEEec-CC-CHHH
Q 015435 302 ATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGT------PG-----DWSH----IIKQIGMFTFT-GL-NSEQ 364 (407)
Q Consensus 302 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~-----~~~~----~~~~~~~~~~~-~~-~~~~ 364 (407)
...++ .+..+.++..++...+.+.|++.+. |. .... ....+++|.+. +- +.+.
T Consensus 239 ~rgl~----------tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~ 308 (377)
T TIGR01324 239 LRGLR----------TLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQ 308 (377)
T ss_pred Hhhhh----------hHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHH
Confidence 44433 2444456666777777888876542 11 0000 01236666654 22 3444
Q ss_pred HHHhHhhc---cEEE---------c----------------CCC--eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 365 VAFMTKEY---HIYM---------T----------------SDG--RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 365 ~~~~l~~~---gi~~---------~----------------~gg--Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
..++++.- ++.+ . +++ |+|++- |+.+.+++-|.++|+.
T Consensus 309 ~~~~~~~l~~~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~~~liR~svGl---E~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 309 VHAFLDHLQLFGLGYSWGGYESLALCNQPELGHRPNIKRNLEGPLIRVHIGL---ENVDDLKADLKAGFEA 376 (377)
T ss_pred HHHHHHhCCcceEeccCCCccceeecCCCCCCHHHHHhccCCCCEEEEEeCC---CCHHHHHHHHHHHHhc
Confidence 44444432 2221 1 112 888773 7899999999998864
No 248
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=5.1e-18 Score=159.38 Aligned_cols=260 Identities=13% Similarity=0.119 Sum_probs=170.6
Q ss_pred CceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHH----HHhhcCceeeEEEeecCCCCCcChhhHHHHHHc
Q 015435 99 NRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPK----VFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRA 174 (407)
Q Consensus 99 ~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~----~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~ 174 (407)
+..++ +++|++|+..+ ++..+.+||+|++++|.|.++.. .++..|+++..++. . +.+.+++++.
T Consensus 80 ~~~v~--~sSG~aAi~~~--l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~---~----~~e~l~~al~- 147 (395)
T PRK05967 80 AGTIL--VPSGLAAVTVP--FLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDP---E----IGAGIAKLMR- 147 (395)
T ss_pred CCEEE--ECcHHHHHHHH--HHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCC---C----CHHHHHHhcC-
Confidence 34555 67789999998 45668999999999999999875 44678998888753 1 3477888887
Q ss_pred CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCcc
Q 015435 175 APSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKN 254 (407)
Q Consensus 175 ~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 254 (407)
+++++|++ .+|+||++. ..++++|+++|+++|+++|+|++|....+- .++ . ....+++.|.+|.
T Consensus 148 -~~TklV~l-esPsNP~l~---v~dl~~I~~la~~~g~~vvVD~t~a~p~~~------~pl----~-~GaDivv~S~tKy 211 (395)
T PRK05967 148 -PNTKVVHT-EAPGSNTFE---MQDIPAIAEAAHRHGAIVMMDNTWATPLYF------RPL----D-FGVDISIHAATKY 211 (395)
T ss_pred -cCceEEEE-ECCCCCCCc---HHHHHHHHHHHHHhCCEEEEECCccCceec------Chh----H-cCCCEEEEecccc
Confidence 67888777 899999876 789999999999999999999998754421 111 1 2345999999999
Q ss_pred ccccC-CCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHH
Q 015435 255 MGLYG-ERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLF 333 (407)
Q Consensus 255 ~~~~G-~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 333 (407)
++..| .-.|++ +.+++..+++ ...........++..+..+..-++ .+..+.++..++...+.
T Consensus 212 ~~Gh~d~~~G~v---~~~~~~~~~l----~~~~~~~G~~~~p~da~l~~rgl~----------Tl~lR~~~~~~na~~lA 274 (395)
T PRK05967 212 PSGHSDILLGTV---SANEKCWPQL----LEAHGTLGLCAGPDDTYQILRGLR----------TMGIRLEHHRKSALEIA 274 (395)
T ss_pred cCCCCCeeEEEE---EcCHHHHHHH----HHHHHHcCCCCCHHHHHHHHcCcc----------cHHHHHHHHHHHHHHHH
Confidence 76444 344544 5555543333 222222333445544444443333 34555667777888888
Q ss_pred HHHHhcCC------CC-----Cccc----ccCCceeEEec-C-C---CHHHHHHhHhhccEE-EcC--C-----------
Q 015435 334 DALSARGT------PG-----DWSH----IIKQIGMFTFT-G-L---NSEQVAFMTKEYHIY-MTS--D----------- 379 (407)
Q Consensus 334 ~~l~~~~~------~~-----~~~~----~~~~~~~~~~~-~-~---~~~~~~~~l~~~gi~-~~~--g----------- 379 (407)
+.|++.+. |. ..+. ....||++.|. + - +.+.+.+++++-.+. ..+ |
T Consensus 275 ~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sLi~~~~~ 354 (395)
T PRK05967 275 RWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFLDALEIFGLGYSWGGYESLALHVKL 354 (395)
T ss_pred HHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHHHhCCcceEccCCCCcceeeeeCCC
Confidence 88887642 11 0000 01236666654 2 1 345566666654442 111 1
Q ss_pred ------------C--eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 380 ------------G--RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 380 ------------g--Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
+ |||++- |+.+.+++-|.++|+..
T Consensus 355 ~~~~~~~~~~~~~liRlSvGl---Ed~~dLi~Dl~~Al~~~ 392 (395)
T PRK05967 355 GDRTVAKAPYAGPVIRLQIGL---EDVPDLKADLERGFAAA 392 (395)
T ss_pred ChhHhhhccCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence 1 888773 78999999999988754
No 249
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.84 E-value=3e-18 Score=164.37 Aligned_cols=209 Identities=11% Similarity=0.001 Sum_probs=144.0
Q ss_pred eeeeeeecCCCccc-cchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHH
Q 015435 36 LGVGAYRTEEGKPL-VLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLR 114 (407)
Q Consensus 36 l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~ 114 (407)
|++|.+..+...+. +.+.+.++.+.+. . ....+++ -..+|++++++++ +. +++++ ++|||+++.
T Consensus 28 ~~~~~~~ip~~~~~~~~~~~~a~~~~~~--~-~~~~~G~--~~~~fe~~lA~~~-g~-------~~~v~--~~sGt~al~ 92 (438)
T PRK15407 28 FVPGKSPIPPSGKVIDAKELQNLVDASL--D-FWLTTGR--FNDAFEKKLAEFL-GV-------RYALL--VNSGSSANL 92 (438)
T ss_pred ccCCCCCCCcCccCCCHHHHHHHHHHHH--h-CcccCCh--hHHHHHHHHHHHh-CC-------CeEEE--ECCHHHHHH
Confidence 57776533333222 3344555555553 1 1222222 2578999999998 53 57888 999999999
Q ss_pred HHHHHHH-------hhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCC
Q 015435 115 VGAEFLA-------RHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACA 187 (407)
Q Consensus 115 ~~~~~~~-------~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p 187 (407)
+++..+. .+.+||+|+++.++|..+...+...|++++.++++ +.++.+|++.+++.+. +++++|++.+
T Consensus 93 ~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd-~~~~~id~~~le~~i~--~~tkaVi~~~-- 167 (438)
T PRK15407 93 LAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVE-LPTYNIDASLLEAAVS--PKTKAIMIAH-- 167 (438)
T ss_pred HHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecC-CCcCCcCHHHHHHHcC--cCCeEEEEeC--
Confidence 9854332 34789999999999999999999999999999983 4568899999999987 6777777743
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccC-CCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeE
Q 015435 188 HNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFAS-GSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALS 266 (407)
Q Consensus 188 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 266 (407)
++|. +.++++|.++|++||++||+|++++.... .+. . ....++-.++.+..+|.++ .|- -|++
T Consensus 168 --~~G~---p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~-----~---~G~~gd~~~fSf~~~k~~~-~ge-GG~l- 231 (438)
T PRK15407 168 --TLGN---PFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGR-----M---TGTFGDIATLSFYPAHHIT-MGE-GGAV- 231 (438)
T ss_pred --CCCC---hhhHHHHHHHHHHCCCEEEEECccchhhhcCCe-----e---eeccCceEEEeCCCCCCcc-ccC-ceEE-
Confidence 4555 45789999999999999999999864432 211 1 1122333444444457675 354 3888
Q ss_pred EeecChhhHHHHHHH
Q 015435 267 IVCKTEDVASRVESQ 281 (407)
Q Consensus 267 ~v~~~~~~~~~~~~~ 281 (407)
++.|+++.+++...
T Consensus 232 -~t~d~~l~~~~~~~ 245 (438)
T PRK15407 232 -FTNDPLLKKIIESF 245 (438)
T ss_pred -EECCHHHHHHHHHH
Confidence 79988887765543
No 250
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.83 E-value=2.4e-18 Score=157.99 Aligned_cols=286 Identities=19% Similarity=0.189 Sum_probs=191.5
Q ss_pred CcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEe
Q 015435 76 GLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRY 155 (407)
Q Consensus 76 g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~ 155 (407)
-..+|.+++++++ +. .+.+. +++||.|+.++++.+. +.+||+||+++.+|......+...|++++.+++
T Consensus 35 ~v~~FE~~~ae~~-G~-------k~ava--~~sgT~AL~laL~al~-ig~GDeVI~ps~TfvATan~i~~~Ga~PVFvDi 103 (374)
T COG0399 35 FVRRFEQAFAEYL-GV-------KYAVA--VSSGTAALHLALLALA-IGPGDEVIVPSFTFVATANAVLLVGAKPVFVDI 103 (374)
T ss_pred HHHHHHHHHHHHh-CC-------CeEEE--ecChHHHHHHHHHhcC-CCCCCEEEecCCchHHHHHHHHHcCCeEEEEec
Confidence 4678999999998 64 67888 9999999999954334 789999999999999999999999999999999
Q ss_pred ecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeecccccccc-CCCCCchhHH
Q 015435 156 YDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFA-SGSLDADAQS 234 (407)
Q Consensus 156 ~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~-~~~~~~~~~~ 234 (407)
|++++.+|++.++++|+ +++++|+.+.-..+|. ++++|.++|++||++||+|++.+... +.+
T Consensus 104 -d~~T~nid~~~ie~aIt--~~tKAIipVhl~G~~~-------dm~~i~~la~~~~l~vIEDaAqa~Ga~y~g------- 166 (374)
T COG0399 104 -DPDTLNIDPDLIEAAIT--PRTKAIIPVHLAGQPC-------DMDAIMALAKRHGLPVIEDAAQAHGATYKG------- 166 (374)
T ss_pred -CCcccCCCHHHHHHHcc--cCCeEEEEehhccCCC-------CHHHHHHHHHHcCCeEEEEcchhccCeecC-------
Confidence 57789999999999999 6688877755555544 78889999999999999999975332 221
Q ss_pred HHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhc----cc------CCCChhHHHHHHHH
Q 015435 235 VRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRP----MY------SSPPIHGASIVATI 304 (407)
Q Consensus 235 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~----~~------~~~~~~~~~~~~~~ 304 (407)
......++-.++.+=.+|.++ +| --|.+ ++.|+++.++++..-.+.... .+ ++.-.-.+.++...
T Consensus 167 -k~vGt~Gd~~~fSF~~~K~it-tg-EGGav--~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl 241 (374)
T COG0399 167 -KKVGSFGDIGAFSFHATKNLT-TG-EGGAV--VTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGL 241 (374)
T ss_pred -cccccccceEEEEecCCCCcc-cc-CceEE--EeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHH
Confidence 112333455566666788888 55 45888 799998888776655544432 01 11112222222222
Q ss_pred hcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc-ccCC---ceeEEec------CCCHHHHHHhHhhccE
Q 015435 305 LKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSH-IIKQ---IGMFTFT------GLNSEQVAFMTKEYHI 374 (407)
Q Consensus 305 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~---~~~~~~~------~~~~~~~~~~l~~~gi 374 (407)
. ++ +.+++..++-++..+...+.|+++.. +.. ..+. ..++.+. +.+.+.+...|++.||
T Consensus 242 ~---QL-----~~l~~~~~~R~~~a~~Y~~~l~~~~~---~~~p~~~~~~~~~~~~~~i~~~~~~~~R~~l~~~L~~~gi 310 (374)
T COG0399 242 A---QL-----ERLDEINERRREIAQIYAEALKGLPG---ITLPPEPDGAVHAWHLYTILVDEEGISRDALMESLKEAGV 310 (374)
T ss_pred H---HH-----HHHHHHHHHHHHHHHHHHHHhhcCCC---ccccCCCCCceeeeeeeEEEecCCCCCHHHHHHHHHhCCC
Confidence 1 11 22344444444455556666665531 111 1222 2233322 1456777788887755
Q ss_pred E----EcCC--------------C----------eE-Ee---cCCCCCChhHHHHHHHHHHHh
Q 015435 375 Y----MTSD--------------G----------RI-SM---AGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 375 ~----~~~g--------------g----------Ri-s~---~~~~~e~i~~~~~~l~~~l~~ 405 (407)
. ..|- + |+ ++ ..+++++++++++.|++++..
T Consensus 311 ~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 311 GAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred CceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence 3 3331 1 33 33 347889999999999998754
No 251
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.83 E-value=2.7e-18 Score=162.08 Aligned_cols=276 Identities=16% Similarity=0.221 Sum_probs=175.2
Q ss_pred CcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHH----HHhhcCceee
Q 015435 76 GLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPK----VFTLAGLSVK 151 (407)
Q Consensus 76 g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~----~~~~~G~~~~ 151 (407)
....|+++++++. +. +..++ +++|+.++.++ +..+.+||+|++++|.|.+... .+...|++++
T Consensus 51 ~~~~Le~~la~l~-g~-------~~al~--~~SG~~Al~~~---l~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~ 117 (380)
T PRK06176 51 TRFALEELIADLE-GG-------VKGFA--FASGLAGIHAV---FSLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCT 117 (380)
T ss_pred hHHHHHHHHHHHh-CC-------CCEEE--ECCHHHHHHHH---HHHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEE
Confidence 4778889999987 43 45566 77888899866 3457899999999999976644 3456788887
Q ss_pred EEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCch
Q 015435 152 TYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDAD 231 (407)
Q Consensus 152 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~ 231 (407)
.++. .|++++++++. ++++++++ .+|+||||.+.+ +++|+++|+++|+++|+|++|+......
T Consensus 118 ~vd~-------~d~e~l~~ai~--~~t~lV~l-esP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~~---- 180 (380)
T PRK06176 118 IIDT-------SDLSQIKKAIK--PNTKALYL-ETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQN---- 180 (380)
T ss_pred EcCC-------CCHHHHHHhcC--cCceEEEE-ECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccCC----
Confidence 7754 37899999887 66788777 899999999764 7788888999999999999987544321
Q ss_pred hHHHHHHHHcCCcEEEEEecCccccccCCCc-ceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhh
Q 015435 232 AQSVRMFVADGGECLVAQSYAKNMGLYGERV-GALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTM 310 (407)
Q Consensus 232 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 310 (407)
++ .....++++|++|.++.+|..+ |++ ++.++++.+++ ...+.......++.....+...++.
T Consensus 181 --p~-----~~gaDivv~S~tK~l~g~~d~~gG~v--v~~~~~~~~~~----~~~~~~~G~~~~~~~~~l~~~gl~t--- 244 (380)
T PRK06176 181 --PL-----LLGADIVVHSGTKYLGGHSDVVAGLV--TTNNEALAQEI----AFFQNAIGGVLGPQDSWLLQRGIKT--- 244 (380)
T ss_pred --cc-----ccCCCEEEecCceeccCCccceeeEE--EecHHHHHHHH----HHHHHHhcCCCCHHHHHHHHhccCc---
Confidence 11 1134588999999998666544 445 55555544433 3333222222233333333322221
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CC-----Cccc----ccCCceeEEecCCCHHHHHHhHhhccEE
Q 015435 311 YKEWTLELKAMADRIISMRQQLFDALSARGT------PG-----DWSH----IIKQIGMFTFTGLNSEQVAFMTKEYHIY 375 (407)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~-----~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~gi~ 375 (407)
+..+.++..++...+.+.|++.+. |. .... ....||++.+.=-+.+.+.++++.-.+.
T Consensus 245 -------l~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l~~~ 317 (380)
T PRK06176 245 -------LGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKNDSEAVAFVESLKLF 317 (380)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcCCcc
Confidence 333444455566677777776531 11 0000 1123555554311345555666554442
Q ss_pred E---cCC-----------------------------C--eEEecCCCCCChhHHHHHHHHHHHhhC
Q 015435 376 M---TSD-----------------------------G--RISMAGLSSKTVPHLTDAIHAAVTRMG 407 (407)
Q Consensus 376 ~---~~g-----------------------------g--Ris~~~~~~e~i~~~~~~l~~~l~~~~ 407 (407)
- .=| + |+|++- |+.+.+++-|+++|+..|
T Consensus 318 ~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dli~dl~~Al~~~~ 380 (380)
T PRK06176 318 ILGESLGGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVGI---EHEQDLLEDLEQAFAKIG 380 (380)
T ss_pred eEccCCCCCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHhhcC
Confidence 2 101 1 888873 889999999999998765
No 252
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.83 E-value=2e-18 Score=164.22 Aligned_cols=309 Identities=15% Similarity=0.104 Sum_probs=188.9
Q ss_pred cchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHh-hcCCCe
Q 015435 50 VLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLAR-HYHQLT 128 (407)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~-~~~gd~ 128 (407)
..+..+++.+.+. .. .|.......++++++++++ +. ++.++ ++|||+|+.+++ ... +.+||+
T Consensus 9 ~~~~~~~v~~~~~--~~---~~~~g~~~~~le~~la~~~-g~-------~~~v~--~~sgt~al~~~l--~al~~~~Gd~ 71 (380)
T TIGR03588 9 DQDDIDAVVEVLK--SD---FLTQGPTVPAFEEALAEYV-GA-------KYAVA--FNSATSALHIAC--LALGVGPGDR 71 (380)
T ss_pred CHHHHHHHHHHHh--cC---CccCChhHHHHHHHHHHHH-CC-------CeEEE--EcCHHHHHHHHH--HHcCCCCCCE
Confidence 3345555555554 11 2333456789999999998 53 35666 778999999984 333 569999
Q ss_pred EEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC--CCCcEEEEecCCCCCCCCCCCHHHHHHHHHH
Q 015435 129 IYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA--PSGAIVLLHACAHNPTGVDPTLEQWEQIRQL 206 (407)
Q Consensus 129 Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~--~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~ 206 (407)
|+++.++|..+...+...|++++.+++. ++++.+|++++++.+++. ++++++++ .|++|... ++++|+++
T Consensus 72 Viv~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~d~~~l~~~i~~~~~~~t~~v~~----~~~~G~~~---~~~~i~~l 143 (380)
T TIGR03588 72 VWTTPITFVATANCALYCGAKVDFVDID-PDTGNIDEDALEKKLAAAKGKLPKAIVP----VDFAGKSV---DMQAIAAL 143 (380)
T ss_pred EEeCCcchHHHHHHHHHcCCEEEEEecC-CCcCCcCHHHHHHHhhcccCCCceEEEE----eCCCCccC---CHHHHHHH
Confidence 9999999999999999999999999983 556789999999999732 34566554 45788754 58888899
Q ss_pred HHHcCceeeecccccccc-CCCCCchhHHHHHHHHcCCcEEEEEec--CccccccCCCcceeEEeecChhhHHHHHHHHh
Q 015435 207 MRSKGLLPFFDSAYQGFA-SGSLDADAQSVRMFVADGGECLVAQSY--AKNMGLYGERVGALSIVCKTEDVASRVESQLK 283 (407)
Q Consensus 207 ~~~~~~~li~D~~y~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~ 283 (407)
|++||++||+|++++... +.+. ... . ...+ .+.+.|+ +|.++. | ..|++ ++.++++.+++.....
T Consensus 144 ~~~~~~~lI~D~a~a~g~~~~~~---~~g--~-~~~~--d~~~~S~~~~K~~~~-~-~GG~v--~~~~~~~~~~~~~~~~ 211 (380)
T TIGR03588 144 AKKHGLKIIEDASHALGAEYGGK---PVG--N-CRYA--DATVFSFHPVKIITT-A-EGGAV--TTNDEELAERMRLLRS 211 (380)
T ss_pred HHHcCCEEEEECCCcccCccCCE---eCC--C-cccc--ceEEEecCCCCcccc-c-CceEE--EECCHHHHHHHHHHHH
Confidence 999999999999986542 2221 110 0 0122 3555555 488763 3 34666 6888877766554211
Q ss_pred hhhhc------------ccCCCCh----hHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Q 015435 284 LVIRP------------MYSSPPI----HGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSH 347 (407)
Q Consensus 284 ~~~~~------------~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 347 (407)
..... +...... ..+....+++...+ + +.+++..++-+++.+++.+.|.+++. +..
T Consensus 212 ~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~q----L-~~l~~~~~~r~~~~~~~~~~L~~~~~---~~~ 283 (380)
T TIGR03588 212 HGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQ----L-KKLDRFVAKRREIAARYDRLLKDLPY---FTP 283 (380)
T ss_pred CCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHH----H-HHHHHHHHHHHHHHHHHHHHhcCCCC---ccC
Confidence 11000 0000000 00011111111111 1 22455666667788888888887652 222
Q ss_pred ccC-C---ceeEEe---cC----CCHHHHHHhHhhccEEEcCC----------------C----------e-EEec---C
Q 015435 348 IIK-Q---IGMFTF---TG----LNSEQVAFMTKEYHIYMTSD----------------G----------R-ISMA---G 386 (407)
Q Consensus 348 ~~~-~---~~~~~~---~~----~~~~~~~~~l~~~gi~~~~g----------------g----------R-is~~---~ 386 (407)
..+ . .+++.+ +. .+.+.+.+.|+++||.+... + | |++. .
T Consensus 284 ~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~ 363 (380)
T TIGR03588 284 LTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPA 363 (380)
T ss_pred CCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCC
Confidence 211 1 122222 22 35677777778889977421 0 2 2332 2
Q ss_pred CCCCChhHHHHHHHHHH
Q 015435 387 LSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 387 ~~~e~i~~~~~~l~~~l 403 (407)
++++|++++++.|++++
T Consensus 364 l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 364 LTLEQQQRVVETLRKVL 380 (380)
T ss_pred CCHHHHHHHHHHHHHhC
Confidence 57788999998888764
No 253
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.83 E-value=2.5e-18 Score=165.64 Aligned_cols=336 Identities=16% Similarity=0.127 Sum_probs=202.4
Q ss_pred cCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 28 DTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 28 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
..++++||+..|....+.| ..++++++++.+++. ..... ..+.....++.+.+++.+.+ .+.+.+ ++
T Consensus 96 ~dG~~yiD~~~g~g~~~lG-h~~p~v~~av~~ql~--~~~~~-~~~~~~~~~lAe~l~~~~p~-------~~~v~f--~~ 162 (474)
T PLN02482 96 VDGNEYIDYVGSWGPAIIG-HADDEVLAALAETMK--KGTSF-GAPCLLENVLAEMVIDAVPS-------VEMVRF--VN 162 (474)
T ss_pred CCCCEEEEecccccccccC-CCCHHHHHHHHHHHh--hCCCC-CCCCHHHHHHHHHHHHhCCC-------CCEEEE--eC
Confidence 4578999999886544566 667788888888886 22222 12222233455555554411 278999 99
Q ss_pred CcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhh-c-------------Cc------eeeEEEeecCCCCCcChhh
Q 015435 108 SGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTL-A-------------GL------SVKTYRYYDPATRGLNFQG 167 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~-~-------------G~------~~~~v~~~~~~~~~~d~~~ 167 (407)
+||+|.+.++++.+.....++|+...-+|+++.+.+.. . |. .+..+ +. -|++.
T Consensus 163 SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~---nd~~~ 235 (474)
T PLN02482 163 SGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTA----PY---NDLEA 235 (474)
T ss_pred ChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEe----cC---CChHH
Confidence 99999999998887776567888888889887643221 0 10 01111 11 16788
Q ss_pred HHHHHHcCCCC-cEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcE
Q 015435 168 LLEDLRAAPSG-AIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245 (407)
Q Consensus 168 l~~~i~~~~~~-~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (407)
+++.+.+.+.. .++++ -....-.|.+ .+++.+++|.++|++||+++|+||+..+| ..+ .......+.- ..++
T Consensus 236 l~~~l~~~~~~iAavI~-Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g---~~ga~~~~gv-~PDi 309 (474)
T PLN02482 236 VKKLFEANKGEIAAVIL-EPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIA---YGGAQEYFGI-TPDL 309 (474)
T ss_pred HHHHHHhCCCceEEEEE-CCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecC---cchHhHHhCC-CCCE
Confidence 88888644333 44444 3334445665 45789999999999999999999999877 432 1222222221 1222
Q ss_pred EEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHH
Q 015435 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRI 325 (407)
Q Consensus 246 i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 325 (407)
.+++|.++ .|+++|.+ ++. +++.+.+.. ........+++.+++++.++.+.|+... + +...+++
T Consensus 310 ---~t~gK~lg-gG~Pigav--~g~-~ei~~~~~~-~~~~~~~~T~~gnpl~~aAala~L~~l~------~--~~~~~~~ 373 (474)
T PLN02482 310 ---TTLGKVIG-GGLPVGAY--GGR-REIMEMVAP-AGPMYQAGTLSGNPLAMTAGIHTLKRLQ------Q--PGTYEYL 373 (474)
T ss_pred ---EEecchhh-CCCceEEE--EEc-HHHHHhhcc-CCCcccccCcchhHHHHHHHHHHHHHHh------c--cCHHHHH
Confidence 36899998 78999998 454 444333221 0111122344567777777776665321 1 2345566
Q ss_pred HHHHHHHHHHHHhcCCCCCcccc-cCCceeEEe-c--C-C---------CHH---HHHHhHhhccEEEcCCC----eEEe
Q 015435 326 ISMRQQLFDALSARGTPGDWSHI-IKQIGMFTF-T--G-L---------NSE---QVAFMTKEYHIYMTSDG----RISM 384 (407)
Q Consensus 326 ~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~-~--~-~---------~~~---~~~~~l~~~gi~~~~gg----Ris~ 384 (407)
.++.++|.+.|+++.....+.+. ...++++.+ . + . +.+ .+.+.+.++||.+.+.+ .+++
T Consensus 374 ~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~~~~psl 453 (474)
T PLN02482 374 DKITKKLIQGILEAGKKAGHEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQFEAGFTSL 453 (474)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEcccceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccCCCCCcCCC
Confidence 66666776666654311112222 222334321 1 1 0 111 23344455899998864 2456
Q ss_pred cCCCCCChhHHHHHHHHHHHhh
Q 015435 385 AGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 385 ~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
.. +++||+++++++.++++++
T Consensus 454 ~h-t~~dId~~l~al~~~l~~~ 474 (474)
T PLN02482 454 AH-TEEDIDFTIAAAERVLARI 474 (474)
T ss_pred CC-CHHHHHHHHHHHHHHHHhC
Confidence 64 9999999999999998763
No 254
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.83 E-value=1.5e-18 Score=163.69 Aligned_cols=281 Identities=16% Similarity=0.107 Sum_probs=180.3
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeE
Q 015435 73 PIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKT 152 (407)
Q Consensus 73 ~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~ 152 (407)
......++++.+++++ +. +++++ ++|||+++..++..+ .+.+||+|+++.++|..+...+...|.+++.
T Consensus 16 ~~~~~~~~~~~la~~~-~~-------~~~~~--~~sgt~al~~~l~~l-~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~ 84 (352)
T cd00616 16 LGPKVREFEKAFAEYL-GV-------KYAVA--VSSGTAALHLALRAL-GIGPGDEVIVPSFTFVATANAILLLGATPVF 84 (352)
T ss_pred CCHHHHHHHHHHHHHh-CC-------CeEEE--ECCHHHHHHHHHHHc-CCCCCCEEEeCCcchHHHHHHHHHcCCeEEE
Confidence 3446889999999998 53 56888 889999999984222 1468999999999999999999999999999
Q ss_pred EEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchh
Q 015435 153 YRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADA 232 (407)
Q Consensus 153 v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~ 232 (407)
++.+ +.++.+|++++++.+. ++++++++ .||+|... ++++|.++|+++|+++|+|++++....... .
T Consensus 85 ~~~~-~~~~~~d~~~l~~~i~--~~~~~v~~----~~~~G~~~---~~~~i~~l~~~~~i~li~D~a~~~g~~~~~--~- 151 (352)
T cd00616 85 VDID-PDTYNIDPELIEAAIT--PRTKAIIP----VHLYGNPA---DMDAIMAIAKRHGLPVIEDAAQALGATYKG--R- 151 (352)
T ss_pred EecC-CCcCCcCHHHHHHhcC--cCCeEEEE----ECCCCCcC---CHHHHHHHHHHcCCeEEEECCCCCCCeECC--E-
Confidence 9983 4467889999999886 56777766 25799865 477788889999999999999863322100 0
Q ss_pred HHHHHHHHcCCcEEEEEecC--ccccccCCCcceeEEeecChhhHHHHHHHHhhhhhc-----------ccCCCChhHHH
Q 015435 233 QSVRMFVADGGECLVAQSYA--KNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRP-----------MYSSPPIHGAS 299 (407)
Q Consensus 233 ~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 299 (407)
. +... ..+.+.|++ |.++ +.+.|++ +++++++.+++.......... .....+.+...
T Consensus 152 -~---~~~~--~d~~~~S~~~~K~~~--~~~gg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa 221 (352)
T cd00616 152 -K---VGTF--GDAGAFSFHPTKNLT--TGEGGAV--VTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAA 221 (352)
T ss_pred -E---cccC--cceeEEcCCCCCCCc--ccCceEE--EECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHH
Confidence 0 0111 135566665 8774 3345777 677766665543321111000 00011222222
Q ss_pred HHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC------CceeEEec-----CCCHHHHHHh
Q 015435 300 IVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIK------QIGMFTFT-----GLNSEQVAFM 368 (407)
Q Consensus 300 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~------~~~~~~~~-----~~~~~~~~~~ 368 (407)
.....+ +.+++..++.+++.+++.+.|++++. +.+..+ ...++.+. +.+.+.+.+.
T Consensus 222 ~~~~~l----------~~~~~~~~~~~~~~~~~~~~L~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 288 (352)
T cd00616 222 IGLAQL----------EKLDEIIARRREIAERYKELLADLPG---IRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEA 288 (352)
T ss_pred HHHHHH----------HhhHHHHHHHHHHHHHHHHHhcCCCC---ccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHH
Confidence 221111 23456667778899999999988632 443321 11233322 2466777777
Q ss_pred HhhccEEEcCC-----------------------------C--eEEecC-CCCCChhHHHHHHH
Q 015435 369 TKEYHIYMTSD-----------------------------G--RISMAG-LSSKTVPHLTDAIH 400 (407)
Q Consensus 369 l~~~gi~~~~g-----------------------------g--Ris~~~-~~~e~i~~~~~~l~ 400 (407)
|+++||.+... + |+++.. .+++|+++++++|+
T Consensus 289 L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 289 LKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred HHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 77789965310 1 555543 57788888888763
No 255
>PRK06062 hypothetical protein; Provisional
Probab=99.83 E-value=3.8e-18 Score=164.39 Aligned_cols=347 Identities=13% Similarity=0.082 Sum_probs=205.1
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhcccccc-ccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRV-KEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
..+++++||+..|....+.| ..++++++++.+++. ..... ..| ......++.+.+++...+ ..+.+++
T Consensus 49 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~q~~-~~~~~~~~~-~~~~~~~lae~L~~~~p~------~~~~v~f-- 117 (451)
T PRK06062 49 DYEGRRYLDFSSQLVNTNIG-HQHPKVVAAIQEQAA-RLCTVAPAH-ANDARSEAARLIAERAPG------DLSKVFF-- 117 (451)
T ss_pred ECCCCEEEEcccCHHhhcCC-CCCHHHHHHHHHHHH-hcCCcCCcc-CCHHHHHHHHHHHHhCCC------CCCEEEE--
Confidence 45679999999987655567 667788888888886 21111 112 222334555556554411 1268999
Q ss_pred cCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhc-Cc-----------eeeEEEeecCCC--CC--cC-----
Q 015435 106 CLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLA-GL-----------SVKTYRYYDPAT--RG--LN----- 164 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~-G~-----------~~~~v~~~~~~~--~~--~d----- 164 (407)
++||++|++.++++.+......+|+...-+|++........ |. .+..++..+... +. -|
T Consensus 118 ~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 197 (451)
T PRK06062 118 TNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECE 197 (451)
T ss_pred cCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHH
Confidence 99999999999988877655567888888888775543321 11 112222211100 00 12
Q ss_pred --hhhHHHHHHcC--CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHH
Q 015435 165 --FQGLLEDLRAA--PSGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFV 239 (407)
Q Consensus 165 --~~~l~~~i~~~--~~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~ 239 (407)
++.+++.+... .+..++++-+ .+.-.|.+ .+.+.+++|.++|++||+++|+||+..+|+..+ ..+....+.
T Consensus 198 ~~~~~le~~l~~~~~~~iAaviiEP-v~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG---~~~a~~~~g 273 (451)
T PRK06062 198 RALAHLERVIELEGPSTIAAILLES-VPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTG---KWFAIEHFG 273 (451)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEcc-ccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCc---HHHHHHhcC
Confidence 56677777532 2234555533 33334555 688999999999999999999999999887654 233333332
Q ss_pred HcCCcEEEEEecCccccccC-CCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHH
Q 015435 240 ADGGECLVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLEL 318 (407)
Q Consensus 240 ~~~~~~i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 318 (407)
-. .+ +.+++|.++ .| +++|.+ ++. +++.+.+.. ..+....+++.+++++.++.+.|+... +
T Consensus 274 v~-PD---i~t~gK~lg-gG~~Pigav--~~~-~~i~~~~~~--~~~~~~~T~~gnpl~~Aaa~a~L~~l~------~-- 335 (451)
T PRK06062 274 VV-PD---LITFAKGVN-SGYVPLGGV--AIS-EAIAATFAD--RPYPGGLTYSGHPLACAAAVATINAME------E-- 335 (451)
T ss_pred CC-CC---eeeechhhh-cCCcCcEEE--EEc-HHHHHHhcc--CCCCCCCCCCCCHHHHHHHHHHHHHHH------h--
Confidence 22 22 335899998 67 489998 565 344333321 011222355677888888887776331 1
Q ss_pred HHHHHHHHHHH-HHHHHHHHhcCCCC-CcccccCCceeEEec--C-------CC--------HHHHHHhHhhccEEEcCC
Q 015435 319 KAMADRIISMR-QQLFDALSARGTPG-DWSHIIKQIGMFTFT--G-------LN--------SEQVAFMTKEYHIYMTSD 379 (407)
Q Consensus 319 ~~~~~~~~~~~-~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~--~-------~~--------~~~~~~~l~~~gi~~~~g 379 (407)
+.+.++.+++. +++.+.|+++-... .+..+...|.++.+. . ++ ...+...+.++||.+.+.
T Consensus 336 ~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~ 415 (451)
T PRK06062 336 EGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFVN 415 (451)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEeec
Confidence 12445555554 46666665541100 011223334333221 0 00 123444555689998765
Q ss_pred C---eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 380 G---RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 380 g---Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
+ ||+..- +++++++++++++.++++++
T Consensus 416 ~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~ 446 (451)
T PRK06062 416 GNRIHVVPPCTVTEDEVREGLAILDAALAVA 446 (451)
T ss_pred CCEEEEECCccCCHHHHHHHHHHHHHHHHHh
Confidence 4 676532 58899999999999998764
No 256
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.83 E-value=2e-19 Score=164.68 Aligned_cols=231 Identities=17% Similarity=0.132 Sum_probs=154.0
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeE
Q 015435 73 PIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKT 152 (407)
Q Consensus 73 ~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~ 152 (407)
|..-+.++++.+++++ +.. +-+++ |+|+|+++.++ +...+.+||+|+++.++|.+....+...|++++.
T Consensus 57 ~~g~i~~~~~~~A~~~-ga~------~~~~~--~~Gst~a~~~~--l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~ 125 (294)
T cd00615 57 PTGPIKEAQELAARAF-GAK------HTFFL--VNGTSSSNKAV--ILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVY 125 (294)
T ss_pred CChHHHHHHHHHHHHh-CCC------CEEEE--cCcHHHHHHHH--HHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEE
Confidence 4445788889999988 531 34556 89999999888 4556889999999999999999999999999999
Q ss_pred EEeecCCC----CCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccc-cCCC
Q 015435 153 YRYYDPAT----RGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGF-ASGS 227 (407)
Q Consensus 153 v~~~~~~~----~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~-~~~~ 227 (407)
++...... ..+|++++++++.+.++.+++++ ++| ||||++++ +++|+++|+++|+++|+|++|... .+.+
T Consensus 126 v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l-~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~ 200 (294)
T cd00615 126 LKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVI-TNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHP 200 (294)
T ss_pred ecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEE-ECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCc
Confidence 87632222 37899999999975455677777 677 79999875 788999999999999999998643 3321
Q ss_pred CCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecCh-hhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhc
Q 015435 228 LDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTE-DVASRVESQLKLVIRPMYSSPPIHGASIVATILK 306 (407)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 306 (407)
. .+.. .......+++.|++|.+ +|++.|++. ..+++ ....++...+... .+.+++...+.++..+++
T Consensus 201 ~----~~~~--~~~~~~div~~S~hK~l--~g~~~~~~l-~~~~~~~~~~~~~~~~~~~---~ttsps~~~~asl~~a~~ 268 (294)
T cd00615 201 I----LPSS--AAMAGADIVVQSTHKTL--PALTQGSMI-HVKGDLVNPDRVNEALNLH---QSTSPSYLILASLDVARA 268 (294)
T ss_pred c----cCcc--hhhcCCcEEEEchhccc--chHhHHHHH-HhCCCcCCHHHHHHHHHHH---CCCCcHHHHHHHHHHHHH
Confidence 1 1111 11235679999999975 677776652 34332 1123333332222 233455444444443333
Q ss_pred ChhhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015435 307 DSTMYKEWTLELKAMADRIISMRQQLFDALS 337 (407)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 337 (407)
-. ...-++..+++.++.+.+++.++
T Consensus 269 ~~------~~~g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 269 MM------ALEGKELVEELIELALYARQEIN 293 (294)
T ss_pred HH------HHHhHHHHHHHHHHHHHHHHHHh
Confidence 11 12233455566666677776654
No 257
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.83 E-value=7.2e-18 Score=160.04 Aligned_cols=310 Identities=20% Similarity=0.213 Sum_probs=200.2
Q ss_pred cccchhHHHHHHHHhcccccc--ccCCC----CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHH
Q 015435 48 PLVLNVVRKAEQLLVNDQSRV--KEYLP----IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLA 121 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~--~~y~~----~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~ 121 (407)
+.|..+++++...+....... ..+.. ..-+.++|+.+++++ +... +++|++ ++|+|.+++.++..+.
T Consensus 10 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~l-g~~~----~~~v~~--~~~~t~a~~~~~~~l~ 82 (371)
T PF00266_consen 10 PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLL-GAPP----DEEVVF--TSNGTEALNAVASSLL 82 (371)
T ss_dssp B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHH-TSST----TEEEEE--ESSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhc-CCcc----cccccc--ccccchhhhhhhhccc
Confidence 456677777766654111111 11111 113568889999988 4321 268999 9999999999853332
Q ss_pred h-hcCCCeEEecCCCCCChHH----HHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCC
Q 015435 122 R-HYHQLTIYIPQPTWGNHPK----VFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPT 196 (407)
Q Consensus 122 ~-~~~gd~Vi~~~p~y~~~~~----~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~ 196 (407)
. +.+||+|++.+-.|++... ..+..|.+++.++. +.+..+|++++++.+. +++.++++ +..+|.||+..+
T Consensus 83 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~--~~~~~~~~~~~~~~l~--~~~~lv~~-~~~~~~tG~~~p 157 (371)
T PF00266_consen 83 NPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPA--DPGGSLDLEDLEEALN--PDTRLVSI-SHVENSTGVRNP 157 (371)
T ss_dssp HHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEE--GTTSSCSHHHHHHHHH--TTESEEEE-ESBETTTTBBSS
T ss_pred cccccccccccccccccccccccccccccchhhhccccc--cccchhhhhhhhhhhc--cccceEEe-ecccccccEEee
Confidence 1 6799999999988887763 33367999999998 3456889999999998 77888888 778899999765
Q ss_pred HHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHH
Q 015435 197 LEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVAS 276 (407)
Q Consensus 197 ~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~ 276 (407)
+++|.++|+++|+++++|.+++.... +.+ ....+..++++|..|..|.+| +|++ ... ++..+
T Consensus 158 ---i~~I~~~~~~~~~~~~vD~~~~~g~~-~id---------~~~~~~D~~~~s~~Kl~gp~G--~g~l--~v~-~~~~~ 219 (371)
T PF00266_consen 158 ---IEEIAKLAHEYGALLVVDAAQSAGCV-PID---------LDELGADFLVFSSHKLGGPPG--LGFL--YVR-PEAIE 219 (371)
T ss_dssp ---HHHHHHHHHHTTSEEEEE-TTTTTTS-S-----------TTTTTESEEEEESTSTTSSST--EEEE--EEE-HHHHH
T ss_pred ---eceehhhhhccCCceeEechhccccc-ccc---------ccccccceeeecccccCCCCc--hhhh--eeh-hhhhh
Confidence 77888889999999999998653332 121 122345678999999555454 6777 354 33333
Q ss_pred HHHHHHhhh-----------------hhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015435 277 RVESQLKLV-----------------IRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSAR 339 (407)
Q Consensus 277 ~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 339 (407)
++....... .+....+++.....++..+++... ....++.+++..+..+++.+.|.++
T Consensus 220 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~-----~~g~~~i~~~~~~l~~~~~~~l~~~ 294 (371)
T PF00266_consen 220 RLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLE-----EIGIERIRERIRELAEYLREALEEL 294 (371)
T ss_dssp HHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhh-----ccccccchhhhhhHHHHHHhhhhcC
Confidence 331111000 001112455555555554443221 2356788899999999999999998
Q ss_pred CCCCCccccc-----CCceeEE--ecCCCHHHHHHhHhhccEEEcCC--------------C--eEEecC-CCCCChhHH
Q 015435 340 GTPGDWSHII-----KQIGMFT--FTGLNSEQVAFMTKEYHIYMTSD--------------G--RISMAG-LSSKTVPHL 395 (407)
Q Consensus 340 ~~~~~~~~~~-----~~~~~~~--~~~~~~~~~~~~l~~~gi~~~~g--------------g--Ris~~~-~~~e~i~~~ 395 (407)
+. +.+.. ..++... +.+.+.+.+...|++.||.+..| | |+|+.. .+++|++++
T Consensus 295 ~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 295 PG---IEVLGPDDEPRRPSIVSFNLPGSDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp TT---EEESSSSCGGBGTTEEEEEETTSSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred Cc---eeEeeecccccccceEEEeecCCCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 64 34322 2334433 34778888888888789999873 2 999876 356777764
No 258
>PLN02651 cysteine desulfurase
Probab=99.83 E-value=1.8e-18 Score=163.58 Aligned_cols=259 Identities=20% Similarity=0.155 Sum_probs=168.0
Q ss_pred cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHH--hhcCCCeEEecCCCCCChHHHH---hhcCceee
Q 015435 77 LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLA--RHYHQLTIYIPQPTWGNHPKVF---TLAGLSVK 151 (407)
Q Consensus 77 ~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~--~~~~gd~Vi~~~p~y~~~~~~~---~~~G~~~~ 151 (407)
+.++|+.+++++ +. ++++|++ |+|+|+++.+++..+. ...+||+|+++...|+.+...+ +..|++++
T Consensus 45 ~~~~r~~la~~~-g~-----~~~~v~~--t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~ 116 (364)
T PLN02651 45 VEKARAQVAALI-GA-----DPKEIIF--TSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVT 116 (364)
T ss_pred HHHHHHHHHHHh-CC-----CCCeEEE--eCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEE
Confidence 567788888877 42 2478999 9999999888753332 1357999999998887654443 35689999
Q ss_pred EEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCch
Q 015435 152 TYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDAD 231 (407)
Q Consensus 152 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~ 231 (407)
.++. +.++.+|++++++.++ ++++++++ ++++||||.+.+ +++|+++|+++|+++++|.+++.... +.+
T Consensus 117 ~v~~--~~~~~~d~~~l~~~i~--~~t~lv~v-~~~~n~tG~~~~---l~~I~~~~~~~g~~~~vD~a~~~g~~-~~~-- 185 (364)
T PLN02651 117 YLPV--KSDGLVDLDELAAAIR--PDTALVSV-MAVNNEIGVIQP---VEEIGELCREKKVLFHTDAAQAVGKI-PVD-- 185 (364)
T ss_pred EEcc--CCCCcCCHHHHHHhcC--CCcEEEEE-ECCCCCceeccc---HHHHHHHHHHcCCEEEEEcchhhCCc-ccC--
Confidence 9988 3456789999999997 56777766 899999999765 77888889999999999999753322 111
Q ss_pred hHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhh---hhcccCCCChhHHHHHHHHhcCh
Q 015435 232 AQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLV---IRPMYSSPPIHGASIVATILKDS 308 (407)
Q Consensus 232 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~ 308 (407)
+ ...+..+++.|..|.+|. ..+|++ +++++ ....+....... ......+++..+..++..+++-.
T Consensus 186 ---~----~~~~~D~~~~s~hK~~gp--~G~g~l--~v~~~-~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~ 253 (364)
T PLN02651 186 ---V----DDLGVDLMSISGHKIYGP--KGVGAL--YVRRR-PRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELA 253 (364)
T ss_pred ---c----ccCCCCEEEechhhhCCC--CceEEE--EEcCC-CCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHH
Confidence 1 122346788889996443 346787 45532 111111111100 01122355666666666555432
Q ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCcccccC------CceeEE--ecCCCHHHHHHhHhhccEEEc
Q 015435 309 TMYKEWTLELKAMADRIISMRQQLFDALSA-RGTPGDWSHIIK------QIGMFT--FTGLNSEQVAFMTKEYHIYMT 377 (407)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~------~~~~~~--~~~~~~~~~~~~l~~~gi~~~ 377 (407)
.+..++.+++.++.++++.+.+.+ ++. +.+..+ ..+... +.+.+.+.+...|.+ |.+.
T Consensus 254 ------~~~~~~i~~~~~~l~~~l~~~l~~~~~~---~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~--i~v~ 320 (364)
T PLN02651 254 ------MKEMDYDEKHMKALRERLLNGLRAKLGG---VRVNGPRDPEKRYPGTLNLSFAYVEGESLLMGLKE--VAVS 320 (364)
T ss_pred ------HHhHHHHHHHHHHHHHHHHHHHHhhCCC---EEEECCCCcccCcCCEEEEEeCCCCHHHHHHHhCC--EEEE
Confidence 133467778888999999998875 321 443332 123333 346777777766664 7664
No 259
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.82 E-value=4.8e-18 Score=160.98 Aligned_cols=155 Identities=19% Similarity=0.186 Sum_probs=116.1
Q ss_pred CceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCC
Q 015435 99 NRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSG 178 (407)
Q Consensus 99 ~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 178 (407)
+++++ |+||++++.+++.. ..+.+||+|+++.|+|..+...+...|++++.++++ ++++.+|++++++.+. +++
T Consensus 47 ~~~v~--~~sgt~al~~~l~~-~~~~~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~d-~~~~~~d~~~le~~i~--~~t 120 (375)
T PRK11706 47 AKVLL--TPSCTAALEMAALL-LDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIR-PDTMNIDETLIEAAIT--PKT 120 (375)
T ss_pred CeEEE--ECCHHHHHHHHHHH-hCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecC-CCcCCcCHHHHHHhcC--CCC
Confidence 68999 99999999887422 235799999999999999999999999999999984 5557899999999987 567
Q ss_pred cEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeecccccccc-CCCCCchhHHHHHHHHcCCcEEEEEecC--ccc
Q 015435 179 AIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFA-SGSLDADAQSVRMFVADGGECLVAQSYA--KNM 255 (407)
Q Consensus 179 ~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~ 255 (407)
+++++ + |+||... ++++|.++|++||++||+|++|+.+. +++. .+ ...+ .+.+.||. |.+
T Consensus 121 k~i~~-~---~~~G~~~---~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~-----~~---g~~~--~~~~~Sf~~~K~l 183 (375)
T PRK11706 121 RAIVP-V---HYAGVAC---EMDTIMALAKKHNLFVVEDAAQGVMSTYKGR-----AL---GTIG--HIGCFSFHETKNY 183 (375)
T ss_pred eEEEE-e---CCCCCcc---CHHHHHHHHHHcCCEEEEECccccccccCCe-----ee---ecCc--CEEEEeCCCCccc
Confidence 77666 2 5789854 57888889999999999999987665 2221 11 1111 23334444 999
Q ss_pred cccCCCcceeEEeecChhhHHHHHH
Q 015435 256 GLYGERVGALSIVCKTEDVASRVES 280 (407)
Q Consensus 256 ~~~G~r~G~~~~v~~~~~~~~~~~~ 280 (407)
+ +|.+.+++ +.++++.+++..
T Consensus 184 ~-~g~gG~~~---~~~~~~~~~~~~ 204 (375)
T PRK11706 184 T-AGEGGALL---INDPALIERAEI 204 (375)
T ss_pred c-ccCCeEEE---ECCHHHHHHHHH
Confidence 7 57775554 777777765544
No 260
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.82 E-value=6.8e-18 Score=162.36 Aligned_cols=344 Identities=13% Similarity=0.092 Sum_probs=204.1
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccc--cCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVK--EYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
..+++++||+..|....+.| ..++.+++++.+++. ...... .| +.....++.+.+++.. ... ..+.+++
T Consensus 50 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~ql~-~~~~~~~~~~-~~~~~~~lAe~L~~~~-p~~----~~~~v~f- 120 (441)
T PRK05769 50 DVDGNVYLDFNAGIAVTNVG-HAHPKVVKAVKEQAE-KFLHYSLTDF-YYEPAVELAERLVEIA-PGG----FEKKVFF- 120 (441)
T ss_pred eCCCCEEEECCCchhhcccC-CCCHHHHHHHHHHHH-hccCccCccc-CCHHHHHHHHHHHHhC-CCC----CCCEEEE-
Confidence 34678999999997666677 667788888888886 211111 12 1222344555555544 210 0268999
Q ss_pred ecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhc-Cc-------------eeeEEEeecCCCC--C-c----
Q 015435 105 QCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLA-GL-------------SVKTYRYYDPATR--G-L---- 163 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~-G~-------------~~~~v~~~~~~~~--~-~---- 163 (407)
++||++|++.++++.+.....++|+...-+|++........ |. .+..++..+.... . -
T Consensus 121 -~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (441)
T PRK05769 121 -TNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEE 199 (441)
T ss_pred -CCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHH
Confidence 99999999999988877655568888888888776543321 11 1222332110000 0 0
Q ss_pred ----ChhhHHH-HHHc---CCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHH
Q 015435 164 ----NFQGLLE-DLRA---APSGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQS 234 (407)
Q Consensus 164 ----d~~~l~~-~i~~---~~~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~ 234 (407)
.++.+++ .+.. ..+..++++ -......|.. .+++.+++|.++|++||+++|+||++.+++..+ ..+.
T Consensus 200 ~~~~~~~~le~~~~~~~~~~~~iaavi~-Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G---~~~a 275 (441)
T PRK05769 200 CGNAVLDFIEDYLFKKLVPPEEVAAIIV-EPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTG---KMFA 275 (441)
T ss_pred HHHHHHHHHHHHHHhhccCCCceEEEEE-CcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---ceeh
Confidence 1233554 2221 123344444 3333345664 678899999999999999999999999887654 2222
Q ss_pred HHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhH
Q 015435 235 VRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEW 314 (407)
Q Consensus 235 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 314 (407)
...+. ...+++ +++|.++ .|+++|++ +++ + ++....... ...+.+.+++++.++.+.|+-..
T Consensus 276 ~~~~g-v~pDiv---t~~K~l~-~G~p~gav--~~~-~----~i~~~~~~~-~~~T~~g~p~~~aaa~a~L~~l~----- 337 (441)
T PRK05769 276 IEHFG-VEPDII---TLAKAIA-GGLPLGAV--IGR-A----ELMFLPPGS-HANTFGGNPVAAAAALATLEELE----- 337 (441)
T ss_pred hhccC-CCCCEE---EEccccc-CCcccEEE--EEe-h----hhhhcCCCC-CCCCCCcCHHHHHHHHHHHHHHH-----
Confidence 22221 112333 4799999 78999998 455 3 333322212 22344567888888887776331
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCceeEEe--cCC----CH---HHHHHhHhhccEEEcCCC----
Q 015435 315 TLELKAMADRIISMRQQLFDALSARGTPG-DWSHIIKQIGMFTF--TGL----NS---EQVAFMTKEYHIYMTSDG---- 380 (407)
Q Consensus 315 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~--~~~----~~---~~~~~~l~~~gi~~~~gg---- 380 (407)
+ ...++++++.++|.+.|+++.... ....+...|.++.+ ..- +. ..+...+.++||.+.+.|
T Consensus 338 -~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~~~~~~l 413 (441)
T PRK05769 338 -E---GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLGAGKSAI 413 (441)
T ss_pred -H---HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEecCCCCEE
Confidence 1 556677777788888777653110 01122223333331 111 11 223344456899998865
Q ss_pred eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 381 RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 381 Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
|++... ++++|++++++++.++++++
T Consensus 414 r~~p~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 414 RIIPPLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 666543 58899999999999998764
No 261
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.82 E-value=1.3e-17 Score=148.48 Aligned_cols=314 Identities=18% Similarity=0.133 Sum_probs=197.5
Q ss_pred cccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCC
Q 015435 48 PLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQL 127 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd 127 (407)
+.|.+.+.+++.+.. ......|+...-...+.+.+++.+ ++ ..++| +++||+++.++ +...+++|+
T Consensus 10 ~g~~~~m~eam~~a~--~~~~~~YG~D~~~~~~e~~~ae~~-g~-------~a~~F--v~sGT~aN~la--l~~~~~~~~ 75 (342)
T COG2008 10 AGPTPEMREALAAAN--AVGDDVYGEDPTTNALEQRIAELF-GK-------EAALF--VPSGTQANQLA--LAAHCQPGE 75 (342)
T ss_pred CCCCHHHHHHHHhcc--ccCCCCCCCCHHHHHHHHHHHHHh-CC-------ceEEE--ecCccHHHHHH--HHHhcCCCC
Confidence 557777777766654 234445766655666666666666 54 68999 99999999999 455588999
Q ss_pred eEEecCCCCCChHH--HHhhcCceeeEEEeecCCCCCcChhhHHHHHHc----CCCCcEEEEecCCCCCCCCCCCHHHHH
Q 015435 128 TIYIPQPTWGNHPK--VFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRA----APSGAIVLLHACAHNPTGVDPTLEQWE 201 (407)
Q Consensus 128 ~Vi~~~p~y~~~~~--~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~----~~~~~~v~i~~~p~NPtG~~~~~~~l~ 201 (407)
.|++..-+|..... ..+.++ .+..++..+..++.++++++++.+.. +..++++++. +.+|..|+++|+++++
T Consensus 76 ~vi~~~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e-~~~te~GtVy~l~el~ 153 (342)
T COG2008 76 SVICHETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLE-NTATEGGTVYPLDELE 153 (342)
T ss_pred eEEEeccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEe-eccCCCceecCHHHHH
Confidence 99999887764433 233332 22333443345688999999998862 3456676663 4455669999999999
Q ss_pred HHHHHHHHcCceeeecccc--ccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHH
Q 015435 202 QIRQLMRSKGLLPFFDSAY--QGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVE 279 (407)
Q Consensus 202 ~i~~~~~~~~~~li~D~~y--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~ 279 (407)
+|.++|++||+.|.+|.+- ......+ .+...+... ..++..++||..+.| +|.+ +..|.++..++.
T Consensus 154 ~i~~~~k~~~l~LHmDGAR~~nA~valg-----~~~~~~~~~--~D~v~~~~tK~g~~~---~gAi--v~gn~~~~~~a~ 221 (342)
T COG2008 154 AISAVCKEHGLPLHMDGARLANALVALG-----VALKTIKSY--VDSVSFCLTKGGGAP---VGAI--VFGNRDFAKRAR 221 (342)
T ss_pred HHHHHHHHhCCceeechHHHHHHHHHcC-----CCHHHHHhh--CCEEEEecccCCcce---eeeE--EEcCHHHHHHHH
Confidence 9999999999999999994 2233222 122223222 234555689987655 5888 788887666654
Q ss_pred HHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCcccccCCceeEEec
Q 015435 280 SQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSAR-GTPGDWSHIIKQIGMFTFT 358 (407)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~ 358 (407)
...+...+.+ .-..+.......+|++.- | .....+-.++...|.+.+++. | +++..|.-...+|+
T Consensus 222 ~~rK~~Ggl~--~k~r~laA~~~~~l~~~~----~----~~~~~Han~mA~~La~~~~~~~G----~~~~~~~~tN~vf~ 287 (342)
T COG2008 222 RWRKRAGGLM--RKARFLAAQGLYALEDDV----W----RLAADHANAMAARLAEGLEAKPG----VKLAFPVETNMVFV 287 (342)
T ss_pred HHHHHhcccH--hhhhHHHHHHHHHHhccH----H----HHHHHHHHHHHHHHHHhhhhcCC----ceeccCCcccEEEE
Confidence 4333322111 222333333444455431 1 122244456688999999855 6 55544323334555
Q ss_pred CCCHHHH-----HHhHhhccEEEcCCC---eEEecC-CCCCChhHHHHHHHHHH
Q 015435 359 GLNSEQV-----AFMTKEYHIYMTSDG---RISMAG-LSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 359 ~~~~~~~-----~~~l~~~gi~~~~gg---Ris~~~-~~~e~i~~~~~~l~~~l 403 (407)
.++...+ ...+...|+.+.+.+ |+..+. .++++++.++..+++++
T Consensus 288 ~l~~~~i~~l~~~~~~~~~~~~~~~~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 288 RLPESAIEALRLAGALFYRGVLIGAHGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred ECChHHHHHHHhhchhheeeeeccCCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 5543222 234444677777765 775443 58899999999988764
No 262
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.82 E-value=6e-18 Score=161.63 Aligned_cols=349 Identities=11% Similarity=0.032 Sum_probs=203.8
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccc-cCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVK-EYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
...++++||+..|....+.| ..++++++++.+++. ...... .+.......++.+.+++.. .. ..+.+++
T Consensus 39 D~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~-~~~~~~~~~~~~~~~~~la~~L~~~~-p~-----~~~~v~f-- 108 (428)
T PRK07986 39 LADGRRLVDGMSSWWAAIHG-YNHPQLNAAMKSQID-AMSHVMFGGITHPPAIELCRKLVAMT-PQ-----PLECVFL-- 108 (428)
T ss_pred eCCCCEEEEcchhHHhhcCC-CCCHHHHHHHHHHHh-hcCCccccccCCHHHHHHHHHHHhhC-CC-----CcCEEEE--
Confidence 45678999999987655566 667788888888875 111111 1112222334445555443 11 1268999
Q ss_pred cCCcccHHHHHHHHHHhhc-----CCCeEEecCCCCCChHHHHhhc-Cc-------------eeeEEEeecCC-C--C-C
Q 015435 106 CLSGTGSLRVGAEFLARHY-----HQLTIYIPQPTWGNHPKVFTLA-GL-------------SVKTYRYYDPA-T--R-G 162 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~-----~gd~Vi~~~p~y~~~~~~~~~~-G~-------------~~~~v~~~~~~-~--~-~ 162 (407)
++||++|++.++++.+... ...+|+....+|++........ |. .+..+|..+.. . + .
T Consensus 109 ~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 188 (428)
T PRK07986 109 ADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDE 188 (428)
T ss_pred eCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHH
Confidence 9999999999998877651 2357898888888754322211 21 11222221000 0 0 1
Q ss_pred cChhhHHHHHHcCCCC-cEEEEecCCCCCCCC-CCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHH
Q 015435 163 LNFQGLLEDLRAAPSG-AIVLLHACAHNPTGV-DPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVA 240 (407)
Q Consensus 163 ~d~~~l~~~i~~~~~~-~~v~i~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~ 240 (407)
-|++++++.+.+.+.. .++++-+-.+.-.|. .++++.+++|.++|++||+++|+||++.+++..+ ..+....+.-
T Consensus 189 ~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG---~~fa~~~~gv 265 (428)
T PRK07986 189 RDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTG---KLFACEHAGI 265 (428)
T ss_pred HHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCC---CeeeecccCC
Confidence 2566777777643333 444442212444565 3567999999999999999999999998886554 2222221211
Q ss_pred cCCcEEEEEecCccccccC-CCcceeEEeecChhhHHHHHHHHh-hhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHH
Q 015435 241 DGGECLVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQLK-LVIRPMYSSPPIHGASIVATILKDSTMYKEWTLEL 318 (407)
Q Consensus 241 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 318 (407)
..+++ .++|.++ .| +.+|.+ +++ +++.+.+...-. .+....+++.+++++.++.+.|+... +
T Consensus 266 -~PDi~---t~gK~l~-gG~~p~~av--~~~-~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~------~-- 329 (428)
T PRK07986 266 -APDIL---CLGKALT-GGTMTLSAT--LTT-REVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLE------S-- 329 (428)
T ss_pred -CCCEE---Eechhhh-CCcccCcch--hch-HHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHH------h--
Confidence 12233 4899997 67 588887 454 443333322000 01122344677888888877776321 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCC----CHHHHHHhHhhccEEEcCCC---eEEecC-CCCC
Q 015435 319 KAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL----NSEQVAFMTKEYHIYMTSDG---RISMAG-LSSK 390 (407)
Q Consensus 319 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gi~~~~gg---Ris~~~-~~~e 390 (407)
+...++++++.+++.+.|+++.....+..+...|.+.. +.+ ....+...+.++|+.+.+.| |+...- ++++
T Consensus 330 ~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~-ve~~~~~~~~~~~~~l~~~Gl~~~~~g~~i~~~Ppl~it~~ 408 (428)
T PRK07986 330 GDWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGV-VETTRPVNMAALQRFFVEQGVWIRPFGKLIYLMPPYIILPE 408 (428)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEE-EEeCCcccHHHHHHHHHHCCcEEEecCCEEEEeCCCCCCHH
Confidence 13456677777777777776521001222222333332 222 23345555566899999877 664332 5889
Q ss_pred ChhHHHHHHHHHHHh
Q 015435 391 TVPHLTDAIHAAVTR 405 (407)
Q Consensus 391 ~i~~~~~~l~~~l~~ 405 (407)
++++++++|.++++.
T Consensus 409 ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 409 QLQRLTAAVNRAVQD 423 (428)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999999864
No 263
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.82 E-value=1.7e-17 Score=158.70 Aligned_cols=348 Identities=12% Similarity=0.042 Sum_probs=205.8
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhcccccccc-CCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKE-YLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
..+++.++|+..|....+.| ...+++++++.+++. ....... +.......++.+.+++.. .. ..+.+++
T Consensus 40 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~-~~~~~~~~~~~~~~~~~lae~L~~~~-p~-----~~~~v~f-- 109 (429)
T PRK06173 40 LKDGRRLIDGMSSWWAALHG-YNHPRLNAAATNQLA-KMSHIMFGGFTHEPAVELAQKLLEIL-PP-----SLNKIFF-- 109 (429)
T ss_pred cCCCCEEEEccchHHhccCC-CCCHHHHHHHHHHHH-hcCCccccccCCHHHHHHHHHHHhhC-CC-----CcCEEEE--
Confidence 45679999999886655566 667788888888876 2111111 112233445566666544 11 1268999
Q ss_pred cCCcccHHHHHHHHHHhhc-----CC-CeEEecCCCCCChHHHHh-hcCc-------------eeeEEEeecCC-C---C
Q 015435 106 CLSGTGSLRVGAEFLARHY-----HQ-LTIYIPQPTWGNHPKVFT-LAGL-------------SVKTYRYYDPA-T---R 161 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~-----~g-d~Vi~~~p~y~~~~~~~~-~~G~-------------~~~~v~~~~~~-~---~ 161 (407)
+++|++|++.++++.+... +| .+|+....+|++...... ..|. .+..+|..+.. . .
T Consensus 110 ~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 189 (429)
T PRK06173 110 ADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWN 189 (429)
T ss_pred eCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHH
Confidence 9999999999998877652 23 468888888887532211 1110 11222221000 0 0
Q ss_pred CcChhhHHHHHHcCCCC-cEEEEecCC-CCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHH
Q 015435 162 GLNFQGLLEDLRAAPSG-AIVLLHACA-HNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMF 238 (407)
Q Consensus 162 ~~d~~~l~~~i~~~~~~-~~v~i~~~p-~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~ 238 (407)
.-+++.+++.+.+.+.. .++++ -.. +.-.|.. ++++.++++.++|++||+++|+||++.+++..+ ..+....+
T Consensus 190 ~~~l~~l~~~i~~~~~~iAAvi~-EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG---~~~a~~~~ 265 (429)
T PRK06173 190 DEAIEPLQDLLEQKGDEIAALIL-EPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTG---KLFALEHA 265 (429)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEE-cchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCC---cchHHHhc
Confidence 01356677777643333 44444 331 4555665 789999999999999999999999998876554 23333322
Q ss_pred HHcCCcEEEEEecCccccccC-CCcceeEEeecChhhHHHHHHHHh-hhhhcccCCCChhHHHHHHHHhcChhhHHhHHH
Q 015435 239 VADGGECLVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQLK-LVIRPMYSSPPIHGASIVATILKDSTMYKEWTL 316 (407)
Q Consensus 239 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 316 (407)
.- ..+++ .++|.++ .| +.+|.+ +.+ +++.+.+..... .+....+...+++++.++.+.|+-.. +
T Consensus 266 gv-~PDiv---~~gK~l~-gG~~p~~a~--~~~-~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~------~ 331 (429)
T PRK06173 266 GV-VPDIM---CIGKALT-GGYLTLSAT--ITT-EAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLL------E 331 (429)
T ss_pred CC-CCCEE---Eeehhhh-CCccccceE--Eec-HHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHH------h
Confidence 11 22233 3899997 67 478887 454 443333221000 01122234567788888877775321 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CCCCCcccccCCceeEEec-C--CCHHHHHHhHhhccEEEcCCC---eEEecC-CC
Q 015435 317 ELKAMADRIISMRQQLFDALSAR-GTPGDWSHIIKQIGMFTFT-G--LNSEQVAFMTKEYHIYMTSDG---RISMAG-LS 388 (407)
Q Consensus 317 ~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~l~~~gi~~~~gg---Ris~~~-~~ 388 (407)
+..+++++++.++|.+.|++. +.+ .+.-+...|.+..+. + .....+...|.++||.+.+.| ||...- ++
T Consensus 332 --~~~~~~~~~~g~~l~~~L~~~~~~~-~v~~vRg~Gl~~~iel~~~~~~~~i~~~l~e~Gi~v~~~g~~l~~~Ppl~it 408 (429)
T PRK06173 332 --SPWQQNIQRIEAQLKQELAPAAEFD-SVAEVRVLGAIGVVEMKEPVNMATLQPRFVEHGIWVRPFGKLVYIMPPFIIS 408 (429)
T ss_pred --CCHHHHHHHHHHHHHHHHHHhhcCC-CeeeeeccceEEEEEeCCcccHHHHHHHHHHCCeEEEecCCEEEEeCCccCC
Confidence 134667777888888888764 211 011122234333221 2 123455556666899999877 776543 58
Q ss_pred CCChhHHHHHHHHHHHh
Q 015435 389 SKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 389 ~e~i~~~~~~l~~~l~~ 405 (407)
++++++++++|.+++++
T Consensus 409 ~~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 409 PDELSQLTSGLLRVLKQ 425 (429)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 89999999999999875
No 264
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.81 E-value=5.5e-18 Score=155.48 Aligned_cols=336 Identities=16% Similarity=0.131 Sum_probs=211.3
Q ss_pred CCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCC-CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLP-IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~-~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
.+.++||+-.|.-..=.| ..++.+++++.+++. . ...|.. +...-++.+.+++.+.. -+.|-+ ++
T Consensus 51 DGn~YIDy~~~~Gp~ilG-H~~p~V~~Av~~~l~--~--G~~fg~Pte~Ei~~Aell~~~~p~-------~e~vrf--vn 116 (432)
T COG0001 51 DGNEYIDYVLGWGPLILG-HAHPAVVEAVQEQLE--R--GLSFGAPTELEVELAELLIERVPS-------IEKVRF--VN 116 (432)
T ss_pred CCCEeeehhccCcccccC-CCCHHHHHHHHHHHH--h--cCCCCCCCHHHHHHHHHHHHhcCc-------ccEEEE--ec
Confidence 467899988775322234 446677777777776 2 233543 33344555555555522 288999 99
Q ss_pred CcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHh-hcCce-------------------eeEEEeecCCCCCcChhh
Q 015435 108 SGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFT-LAGLS-------------------VKTYRYYDPATRGLNFQG 167 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~-~~G~~-------------------~~~v~~~~~~~~~~d~~~ 167 (407)
+||+|.-.++++.+.....|+|+..+-+|+++.+.+. .+|.. ++.+|. -|++.
T Consensus 117 SGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y-------ND~~a 189 (432)
T COG0001 117 SGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY-------NDLEA 189 (432)
T ss_pred chhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecC-------CCHHH
Confidence 9999999999998888888999999999999988665 33311 122222 28999
Q ss_pred HHHHHHcC-CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEE
Q 015435 168 LLEDLRAA-PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECL 246 (407)
Q Consensus 168 l~~~i~~~-~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i 246 (407)
+++++++. .+..+|++-+.+.|-.=+...++.++.|.++|++||++||.||+..+|...- ...+.. +.-..|
T Consensus 190 l~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~--gGaq~~--~gi~PD--- 262 (432)
T COG0001 190 LEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVAL--GGAQGY--YGVEPD--- 262 (432)
T ss_pred HHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCC--cccccc--cCcCcc---
Confidence 99999865 3456677766666643335668899999999999999999999988776531 011111 111111
Q ss_pred EEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHH
Q 015435 247 VAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRII 326 (407)
Q Consensus 247 ~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (407)
+.+++|.+| .|+++|.+ ....++.+.+... ...-+..+.+.+++++.+....++...-.+ ...+.+.+.-.
T Consensus 263 -lttlGKiIG-GGlP~ga~---gGr~eiM~~~~p~-g~vyqaGT~sgnplamaAG~atl~~l~~~~---~~y~~l~~~~~ 333 (432)
T COG0001 263 -LTTLGKIIG-GGLPIGAF---GGRAEIMEQLAPL-GPVYQAGTLSGNPLAMAAGLATLEELMTEE---GVYERLDALGE 333 (432)
T ss_pred -hhhhhhhhc-CCcceeee---ccHHHHHhhhCCC-CCccccCCCCCcHHHHHHHHHHHHHHHhcc---cHHHHHHHHHH
Confidence 345899999 89999998 5545544432221 122234555777777777776665331000 01222333333
Q ss_pred HHHHHHHHHHHhcCCCCCcccccCCceeEEec--C--C---------CHH----HHHHhHhhccEEEcCCC----eEEec
Q 015435 327 SMRQQLFDALSARGTPGDWSHIIKQIGMFTFT--G--L---------NSE----QVAFMTKEYHIYMTSDG----RISMA 385 (407)
Q Consensus 327 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~--~--~---------~~~----~~~~~l~~~gi~~~~gg----Ris~~ 385 (407)
+.++-+.+.+.+.+.+ +.+ ...+++|.+. . . +.+ +.. .+.++||.+.|+. -+|..
T Consensus 334 ~L~~gl~~~~~~~g~~--~~v-~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~-~~l~~GV~l~ps~~ea~flS~a 409 (432)
T COG0001 334 RLAEGLRAAAERHGIP--LTV-NRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFH-HLLNRGVYLAPSQFEAGFLSTA 409 (432)
T ss_pred HHHHHHHHHHHHhCCC--eEE-eeecceEEEEecCCCCCCHHHHHhhchHHHHHHHH-HHHhCCcccCCccccceeeecc
Confidence 3444444444455633 222 2234444432 2 1 222 234 4444899999985 56777
Q ss_pred CCCCCChhHHHHHHHHHHHhh
Q 015435 386 GLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 386 ~~~~e~i~~~~~~l~~~l~~~ 406 (407)
+ ++++|++.++++.++++++
T Consensus 410 h-te~di~~~~~a~~~~~~~~ 429 (432)
T COG0001 410 H-TEEDIDRTLEAADEAFKEL 429 (432)
T ss_pred c-CHHHHHHHHHHHHHHHHHh
Confidence 5 9999999999999998765
No 265
>PRK07482 hypothetical protein; Provisional
Probab=99.81 E-value=1.6e-17 Score=160.49 Aligned_cols=344 Identities=13% Similarity=0.041 Sum_probs=204.5
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccC--CCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEY--LPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
...++++||+..|....+.| ..++++++++.+++. .....+.+ .+.....++.+.+++...+ ..+.+++
T Consensus 46 D~dG~~ylD~~sg~~~~~lG-h~~p~v~~Av~~q~~-~~~~~~~~~~~~~~~~~~lAe~L~~~~p~------~~~~v~f- 116 (461)
T PRK07482 46 DAQGRRYIDAFAGLYCVNVG-YGRTEVAEAIAEQAK-ELAYYHTYVGHGTEASITLSKRIIDRAPA------GMSKVYY- 116 (461)
T ss_pred ECCCCEEEEcccchhhhcCC-CCCHHHHHHHHHHHH-hcCccccccccCCHHHHHHHHHHHHhCCC------CcCEEEE-
Confidence 45679999999998766777 667788888888886 21111111 1222234455555554411 1268999
Q ss_pred ecCCcccHHHHHHHHHHhhc-----C-CCeEEecCCCCCChHHHHhhc-C------------ceeeEEEeecCCCC---C
Q 015435 105 QCLSGTGSLRVGAEFLARHY-----H-QLTIYIPQPTWGNHPKVFTLA-G------------LSVKTYRYYDPATR---G 162 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~-----~-gd~Vi~~~p~y~~~~~~~~~~-G------------~~~~~v~~~~~~~~---~ 162 (407)
++||++|++.++++.+... + ..+|+...-+|++........ | ..+..++....... +
T Consensus 117 -~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 195 (461)
T PRK07482 117 -GLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAG 195 (461)
T ss_pred -eCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccC
Confidence 9999999999998886542 2 246888888888764322211 1 11222222100000 0
Q ss_pred --------cChhhHHHHHHc-C-CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCch
Q 015435 163 --------LNFQGLLEDLRA-A-PSGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDAD 231 (407)
Q Consensus 163 --------~d~~~l~~~i~~-~-~~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~ 231 (407)
.+++.+++.+.. . .+..++++-+ .+...|.+ .+++.+++|.++|++||+++|+||+..+|+..+ .
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EP-vqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG---~ 271 (461)
T PRK07482 196 MSEEQFSAYCADELEELILAEGPDTIAAFIAEP-VLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLG---S 271 (461)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCc---c
Confidence 135677777742 2 2345555533 34444666 678899999999999999999999999998764 2
Q ss_pred hHHHHHHHHcCCcEEEEEecCccccccCC-CcceeEEeecChhhHHHHHHHHhh-------hhhcccCCCChhHHHHHHH
Q 015435 232 AQSVRMFVADGGECLVAQSYAKNMGLYGE-RVGALSIVCKTEDVASRVESQLKL-------VIRPMYSSPPIHGASIVAT 303 (407)
Q Consensus 232 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-r~G~~~~v~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 303 (407)
.+....+. -..++++ ++|.++ .|. ++|.+ ++. ++ +.+.+.. +....+++.+++++.++.+
T Consensus 272 ~~a~~~~g-v~PDiv~---~gKgl~-gG~~Pi~av--~~~-~~----i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a 339 (461)
T PRK07482 272 MFGSDHYG-IEPDLIT---VAKGLT-SAYAPLSGS--IVG-EK----VWDVLEQGSDEHGAIGHGWTYSGHPICAAAALA 339 (461)
T ss_pred hhhHHhcC-CCCCEEE---Eccccc-cCcccccee--eec-HH----HHHHHhcccccCCccccCCCCCcCHHHHHHHHH
Confidence 33333332 1233443 689998 574 88888 455 33 4333321 1122455788888888888
Q ss_pred HhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCceeEEecCC----------C-----HHHHHH
Q 015435 304 ILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPG-DWSHIIKQIGMFTFTGL----------N-----SEQVAF 367 (407)
Q Consensus 304 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~----------~-----~~~~~~ 367 (407)
.|+... -+...++.+++.+++.+.|+++-... .+..+...|.++. +.+ + ...+..
T Consensus 340 ~L~~~~--------~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~g-iel~~~~~~~~~~~~~~~~~~~i~~ 410 (461)
T PRK07482 340 NLDILE--------RENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAA-VEFVADRDDRTPFDPALKIGPQVSA 410 (461)
T ss_pred HHHHHH--------hCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEE-EEeccCCCcCCCCChhhHHHHHHHH
Confidence 876321 12344556667777777776541100 0122233343332 211 1 123344
Q ss_pred hHhhccEEEcCC--C---eEEec-CCCCCChhHHHHHHHHHHHh
Q 015435 368 MTKEYHIYMTSD--G---RISMA-GLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 368 ~l~~~gi~~~~g--g---Ris~~-~~~~e~i~~~~~~l~~~l~~ 405 (407)
.+.++|+.+.+. | |+..+ .++++|++++++++.+++++
T Consensus 411 ~~~~~Gvl~~~~~~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 454 (461)
T PRK07482 411 AALERGVIARAMPHGDILGFAPPLVLTRAEADEIVAIAKDAVDE 454 (461)
T ss_pred HHHHCCcEEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 455689988643 4 66533 25889999999999998865
No 266
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.81 E-value=2.3e-17 Score=158.43 Aligned_cols=340 Identities=13% Similarity=0.081 Sum_probs=205.0
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC 106 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t 106 (407)
...++++||+..|....+.| ...+.+++++.+++. ......+ +.....++.+++++.. . + .+.+.+ +
T Consensus 49 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~--~~~~~~~-~~~~~~~la~~l~~~~-p--~----~~~v~f--~ 115 (428)
T PRK12389 49 DVDGNKYIDYLAAYGPIITG-HAHPHITKAITEAAE--NGVLYGT-PTELEIEFAKMLKEAI-P--S----LEKVRF--V 115 (428)
T ss_pred eCCCCEEEEccccccccccC-CCCHHHHHHHHHHHH--hCCccCC-CCHHHHHHHHHHHHhC-C--C----CcEEEE--e
Confidence 35678999999887655666 667788888888886 2222222 3333445555555544 1 1 268999 9
Q ss_pred CCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhc-Cceee--------EEEee-cCCC---CCcChhhHHHHHH
Q 015435 107 LSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLA-GLSVK--------TYRYY-DPAT---RGLNFQGLLEDLR 173 (407)
Q Consensus 107 ~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~-G~~~~--------~v~~~-~~~~---~~~d~~~l~~~i~ 173 (407)
++|++|++.++++.+......+|+...-+|++........ |.... .++.. .+.. .-.|++.+++.+.
T Consensus 116 ~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 195 (428)
T PRK12389 116 NSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALD 195 (428)
T ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHH
Confidence 9999999999988877755568888888888875543322 21110 00000 0000 0126788888886
Q ss_pred cCCC-CcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEec
Q 015435 174 AAPS-GAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSY 251 (407)
Q Consensus 174 ~~~~-~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 251 (407)
+... ..++++ -....-.|.+ .+.+.+++|.++|++||+++|+||+..+| ..+. ......+.- ..++ -++
T Consensus 196 ~~~~~vaavi~-EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~---~~a~~~~gv-~PDi---vt~ 266 (428)
T PRK12389 196 KWGDEVAAVLV-EPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMY---GGAQDLLGV-EPDL---TAL 266 (428)
T ss_pred hcCCcEEEEEE-eCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCc---chhhHHhCC-CCCe---eee
Confidence 4333 344555 3334445665 57889999999999999999999999888 3321 111111211 2222 358
Q ss_pred CccccccCCCcceeEEeecChhhHHHHHHHHhh---hhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHH
Q 015435 252 AKNMGLYGERVGALSIVCKTEDVASRVESQLKL---VIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISM 328 (407)
Q Consensus 252 sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 328 (407)
+|.++ .|+++|.+ +++ ++ +.+.+.. .....+++.+++++.++.+.|+... + +...++++++
T Consensus 267 gK~lg-gG~Pi~av--~~~-~~----i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~------~--~~l~~~~~~~ 330 (428)
T PRK12389 267 GKIIG-GGLPIGAY--GGR-KD----IMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQ------Q--EGVYEKLDRL 330 (428)
T ss_pred chhhc-CCCceeEE--eEH-HH----HHhhhccCCCcccccCCccCHHHHHHHHHHHHHHh------c--ccHHHHHHHH
Confidence 99998 68999998 454 44 4443321 1122345678888888887776321 1 1344566667
Q ss_pred HHHHHHHHHhcC--CCCCcccccCCceeEEe--c-C-C---------C---HHHHHHhHhhccEEEcCCC----eEEecC
Q 015435 329 RQQLFDALSARG--TPGDWSHIIKQIGMFTF--T-G-L---------N---SEQVAFMTKEYHIYMTSDG----RISMAG 386 (407)
Q Consensus 329 ~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~--~-~-~---------~---~~~~~~~l~~~gi~~~~gg----Ris~~~ 386 (407)
.+++.+.|+++- .+....+... +|++.. . . . + ...+...+.++||.+.+.+ .+++.
T Consensus 331 g~~l~~~L~~l~~~~~~~~~v~r~-~g~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~l~- 408 (428)
T PRK12389 331 GAMLEEGILEAAEKHGITITINRL-KGALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSKYEAWFLTTA- 408 (428)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEec-CcEEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCCCCCeeecCC-
Confidence 777777776531 1100122122 223321 1 1 0 1 1234445556899998865 34444
Q ss_pred CCCCChhHHHHHHHHHHHhh
Q 015435 387 LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 387 ~~~e~i~~~~~~l~~~l~~~ 406 (407)
++++|+++++++++++++++
T Consensus 409 ~t~e~id~~~~~l~~~l~~~ 428 (428)
T PRK12389 409 HTEEDIEETLEAVDRAFAQL 428 (428)
T ss_pred CCHHHHHHHHHHHHHHHHhC
Confidence 48899999999999998753
No 267
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.81 E-value=9.1e-18 Score=159.04 Aligned_cols=217 Identities=12% Similarity=0.067 Sum_probs=145.9
Q ss_pred CceEEeecCCcc-cHHHHHHHHHHhhc-CCCeEEecCCCCCChHHHHhhcCceeeEEEe-ecCCCCCcChhhHHHHHHcC
Q 015435 99 NRVTTVQCLSGT-GSLRVGAEFLARHY-HQLTIYIPQPTWGNHPKVFTLAGLSVKTYRY-YDPATRGLNFQGLLEDLRAA 175 (407)
Q Consensus 99 ~~i~~~~t~g~t-~a~~~~~~~~~~~~-~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~-~~~~~~~~d~~~l~~~i~~~ 175 (407)
+..++ ++|+| .++.+++..+.... +||.|+++..+|.....++..+|++++.++. .+++++.+|++++++++++.
T Consensus 124 ~~a~~--v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~ 201 (444)
T TIGR03531 124 KSAFV--VPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEEI 201 (444)
T ss_pred CEEEE--ECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhc
Confidence 36777 99999 57766632221111 5899999999999999999999999999995 24667899999999999832
Q ss_pred CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHH-HHHHcCCcEEEEEecCcc
Q 015435 176 PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVR-MFVADGGECLVAQSYAKN 254 (407)
Q Consensus 176 ~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~s~sK~ 254 (407)
.....++++.+|+ |+...+.+++++|+++|++||+++|+|++|...... ..... .-...+.-.+++.|++|.
T Consensus 202 ~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~-----~~~~~~~g~~~Grad~vv~s~hK~ 274 (444)
T TIGR03531 202 GPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNK-----YMELINKAIKVGRVDAVVSSTDKN 274 (444)
T ss_pred cCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChh-----hhhhhhccccccCCCeEEEeCccC
Confidence 2123333434444 555566899999999999999999999999743210 00110 000111235778899999
Q ss_pred ccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHH
Q 015435 255 MGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFD 334 (407)
Q Consensus 255 ~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (407)
+.++|+ |+++ +++|+++.+.+.. ... ....+...+.+...++..+. +.++++.++..++++++.+
T Consensus 275 l~~pg~--Gg~I-~~~d~el~~~i~~----~y~--g~~~~s~~~~~~~~ll~~G~------~g~~~li~~~~~~a~~l~~ 339 (444)
T TIGR03531 275 FMVPVG--GAII-YSFDENFIQEISK----SYP--GRASASPSLDVLITLLSLGS------KGYLELLKERKEMYKYLKE 339 (444)
T ss_pred CCCCCC--EEEE-EECCHHHHHHHHH----hcc--CCCCChHHHHHHHHHHHhCH------HHHHHHHHHHHHHHHHHHH
Confidence 998876 5552 4767776655433 111 11233445665555555432 5577777888888888888
Q ss_pred HHHhc
Q 015435 335 ALSAR 339 (407)
Q Consensus 335 ~l~~~ 339 (407)
.|+++
T Consensus 340 ~L~~l 344 (444)
T TIGR03531 340 LLQKL 344 (444)
T ss_pred HHHHH
Confidence 88875
No 268
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.81 E-value=3.4e-17 Score=159.21 Aligned_cols=351 Identities=13% Similarity=0.078 Sum_probs=203.8
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccC--CCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEY--LPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
..+++++|||..|....+.| ..++++++++.+++. .....+.+ .+.....++.+.+++.+... +.+.+++
T Consensus 85 D~dG~~ylD~~sg~~~~~lG-h~hp~v~~Av~~ql~-~~~~~~~~~~~~~~~~~~lae~L~~~~~~~-----~~~~v~f- 156 (504)
T PLN02760 85 DINGKKYLDALAGLWCTALG-GSEPRLVAAATEQLN-KLPFYHSFWNRTTKPSLDLAKELLEMFTAR-----KMGKVFF- 156 (504)
T ss_pred ECCCCEEEEcCcCHHhcccC-CCCHHHHHHHHHHHh-hccceecccccCcHHHHHHHHHHHhhcCCC-----CCCEEEE-
Confidence 34678999999987656677 667888888888886 11111111 11222334444444443111 1257899
Q ss_pred ecCCcccHHHHHHHHHHhhc-----CC-CeEEecCCCCCChHHHH-hhcCce------------eeEEEeecCCCCC---
Q 015435 105 QCLSGTGSLRVGAEFLARHY-----HQ-LTIYIPQPTWGNHPKVF-TLAGLS------------VKTYRYYDPATRG--- 162 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~-----~g-d~Vi~~~p~y~~~~~~~-~~~G~~------------~~~v~~~~~~~~~--- 162 (407)
+++|++|++.++++.+... ++ .+|+..+-+|++..... ...|.. +..++..+.....
T Consensus 157 -~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 235 (504)
T PLN02760 157 -TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPG 235 (504)
T ss_pred -eCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCC
Confidence 9999999999988876432 22 57888888887764322 222211 1122211000000
Q ss_pred --------cChhhHHHHHHc-CCC-CcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCch
Q 015435 163 --------LNFQGLLEDLRA-APS-GAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDAD 231 (407)
Q Consensus 163 --------~d~~~l~~~i~~-~~~-~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~ 231 (407)
...+++++.+.+ .+. ..++++ -....-.|.+ .+++.+++|.++|++||+++|+||++.+|+..+ .
T Consensus 236 ~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~-EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG---~ 311 (504)
T PLN02760 236 ETEEEFSTRLADNLENLILKEGPETIAAFIA-EPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLG---T 311 (504)
T ss_pred CcHHHHHHHHHHHHHHHHHhcCCCceEEEEE-CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccc---h
Confidence 012446666642 223 334444 3334344654 678999999999999999999999999997765 2
Q ss_pred hHHHHHHHHcCCcEEEEEecCccccccC-CCcceeEEeecChhhHHHHHHHHh---hhhhcccCCCChhHHHHHHHHhcC
Q 015435 232 AQSVRMFVADGGECLVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQLK---LVIRPMYSSPPIHGASIVATILKD 307 (407)
Q Consensus 232 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~ 307 (407)
.+....+.-..| +.+++|.+| .| +++|.+ +++ +++.+.+..... .+....+++.+++++.++.+.|+.
T Consensus 312 ~~a~e~~gv~PD----ivtlgK~lg-gG~~PigAv--~~~-~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~ 383 (504)
T PLN02760 312 MFGCDKYNIKPD----LVSLAKALS-SAYMPIGAV--LVS-PEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKI 383 (504)
T ss_pred hhHHHhcCCCCc----EEEeccccc-CCccccceE--eec-HHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHH
Confidence 333333222122 345899998 45 589998 455 444433321100 112234557788888888888763
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEec--C-CC-----------HHHHHHhHhhcc
Q 015435 308 STMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFT--G-LN-----------SEQVAFMTKEYH 373 (407)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~--~-~~-----------~~~~~~~l~~~g 373 (407)
.. + +...++.+++.++|.+.|+++.....+..+...|.++.+- . -. ...+...+.++|
T Consensus 384 i~------~--~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~G 455 (504)
T PLN02760 384 YK------E--RNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRG 455 (504)
T ss_pred HH------h--CCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCC
Confidence 31 1 2455667777777777776652100011223334443321 1 00 122334455689
Q ss_pred EEEcCCC---eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 374 IYMTSDG---RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 374 i~~~~gg---Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
|.+.+.| ||+..- ++++|++++++++.++++++
T Consensus 456 vl~~~~g~~lrl~Ppl~it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 456 MLVRVAGDNIMMSPPLIITPEEVDELISIYGKALKAT 492 (504)
T ss_pred cEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9998876 676442 48899999999999988653
No 269
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.81 E-value=2.4e-17 Score=158.77 Aligned_cols=351 Identities=9% Similarity=0.030 Sum_probs=206.8
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhcccccccc-CCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKE-YLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
...++++||+..|....+.| ..++++++++.+++. ....... ..+.....++.+.+++.. +. ..+.+++
T Consensus 50 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~ql~-~~~~~~~~~~~~~~~~~lAe~L~~~~-p~-----~~~~v~f-- 119 (453)
T PRK06943 50 DRDGRRYLDAISSWWVNLFG-HANPRINAALKDQLD-TLEHAMLAGCTHEPAIELAERLAALT-GG-----TLGHAFF-- 119 (453)
T ss_pred eCCCCEEEEcchHHHHhcCC-CCCHHHHHHHHHHHH-hcCCccccccCCHHHHHHHHHHHHhC-CC-----CCCEEEE--
Confidence 45678999999996655667 667788888888876 1111111 112222334555555543 11 1157999
Q ss_pred cCCcccHHHHHHHHHHhhc-----C-CCeEEecCCCCCChHHHHhh-cCc------------eeeEEEeecCCCC--C--
Q 015435 106 CLSGTGSLRVGAEFLARHY-----H-QLTIYIPQPTWGNHPKVFTL-AGL------------SVKTYRYYDPATR--G-- 162 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~-----~-gd~Vi~~~p~y~~~~~~~~~-~G~------------~~~~v~~~~~~~~--~-- 162 (407)
+++|++|++.++++..... + ..+|+...-+|++....... .|- .+..++..+.... .
T Consensus 120 ~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 199 (453)
T PRK06943 120 ASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGET 199 (453)
T ss_pred eCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCC
Confidence 9999999999988875431 2 35788888888876532221 110 1222332111000 0
Q ss_pred ------cChhhHHHHHHcCCC-CcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHH
Q 015435 163 ------LNFQGLLEDLRAAPS-GAIVLLHACAHNPTGV-DPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQS 234 (407)
Q Consensus 163 ------~d~~~l~~~i~~~~~-~~~v~i~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~ 234 (407)
-+++++++.+...+. ..++++-+-.+...|. ..+++.++++.++|++||+++|+||+..+|+..+ ..+.
T Consensus 200 ~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG---~~fa 276 (453)
T PRK06943 200 AADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTG---TFFA 276 (453)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCc---chhH
Confidence 124667777754333 3455553212455566 4789999999999999999999999999998764 3444
Q ss_pred HHHHHHcCCcEEEEEecCccccccC-CCcceeEEeecChhhHHHHHHHH--hhhhhcccCCCChhHHHHHHHHhcChhhH
Q 015435 235 VRMFVADGGECLVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQL--KLVIRPMYSSPPIHGASIVATILKDSTMY 311 (407)
Q Consensus 235 ~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 311 (407)
...+.- ..++++ ++|.++ .| +++|.+ +++ +++.+.+...- ..+....+++.+++++.++.+.|+-..
T Consensus 277 ~~~~gv-~PDivt---~gKgl~-gG~~Pi~av--~~~-~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~-- 346 (453)
T PRK06943 277 CEQAGV-WPDFLC---LSKGIS-GGYLPLSLV--LSR-DAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFA-- 346 (453)
T ss_pred HHhCCC-CCCeEe---eehhhc-cCcccceEE--EEc-HHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHH--
Confidence 433322 233443 589998 68 599998 455 34333322100 011122345678888888888776321
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEe--c-CCC-----HHHHHHhHhhccEEEcCCC---
Q 015435 312 KEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTF--T-GLN-----SEQVAFMTKEYHIYMTSDG--- 380 (407)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~--~-~~~-----~~~~~~~l~~~gi~~~~gg--- 380 (407)
+ +.+.++.+++.+++.+.|+++.....+..+...|.++.+ . +-+ ...+...+.++|+.+.+.|
T Consensus 347 ----~--~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~g~~l 420 (453)
T PRK06943 347 ----E--DDVLARNARKSARLRAALAPLAAHPQVRHLRQRGTIFAFDVALDGDAARTFSRRFFEAALERELLLRPIGTTV 420 (453)
T ss_pred ----h--cCHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccccEEEEEEccCCCcchHHHHHHHHHHHHCCcEEEecCCEE
Confidence 1 234456666777777777665211112223334443332 1 111 1224444556899998866
Q ss_pred eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 381 RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 381 Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
||+..- ++++++++++++|.++++++
T Consensus 421 ~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 421 YLMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred EEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 776332 58899999999999998753
No 270
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.81 E-value=2.7e-17 Score=157.23 Aligned_cols=347 Identities=12% Similarity=0.071 Sum_probs=202.6
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhcccccccc-CCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKE-YLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
...++++||+..|....+.| ...+++++++.+++. ....... +.......++.+.+++.. .. ..+.+++
T Consensus 36 D~dG~~ylD~~~g~~~~~lG-h~~p~i~~ai~~q~~-~~~~~~~~~~~~~~~~~lae~L~~~~-p~-----~~~~v~f-- 105 (422)
T PRK05630 36 LEDGSTVIDAMSSWWSAAHG-HGHPRLKAAAHKQID-TMSHVMFGGLTHEPAIKLTRKLLNLT-DN-----GLDHVFY-- 105 (422)
T ss_pred ECCCCEEEEcchhHHHhcCC-CCCHHHHHHHHHHHH-hCCCcccCCcCCHHHHHHHHHHHhhC-CC-----CcCEEEE--
Confidence 45679999999987655667 667788888888886 2111111 112222345555665544 11 1268999
Q ss_pred cCCcccHHHHHHHHHHhhc-----CC-CeEEecCCCCCChHHHHhhc-Cc-------------eeeEEEeecCCCCCcCh
Q 015435 106 CLSGTGSLRVGAEFLARHY-----HQ-LTIYIPQPTWGNHPKVFTLA-GL-------------SVKTYRYYDPATRGLNF 165 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~-----~g-d~Vi~~~p~y~~~~~~~~~~-G~-------------~~~~v~~~~~~~~~~d~ 165 (407)
+++|++|++.++++..... ++ .+|+...-+|++........ +. .+..+|.. .....+.
T Consensus 106 ~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~ 183 (422)
T PRK05630 106 SDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAP--PVRGSSP 183 (422)
T ss_pred eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCC--cccCCCh
Confidence 9999999999998877653 23 46888888888754433211 11 12223321 1111121
Q ss_pred -------hhHHHHHHcCCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHH
Q 015435 166 -------QGLLEDLRAAPSGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRM 237 (407)
Q Consensus 166 -------~~l~~~i~~~~~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~ 237 (407)
+.+++.+. .+..++++-+-.+...|.. .+.+.+++|.++|++||+++|+||++.+++..+ ..+....
T Consensus 184 ~~~~~~~~~~~~~~~--~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG---~~~a~~~ 258 (422)
T PRK05630 184 QEISEYLRSLELLID--ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTG---ELFATLA 258 (422)
T ss_pred HHHHHHHHHHHHHHh--hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCc---hhhHHHh
Confidence 23344443 3455555532125556664 678899999999999999999999998887653 2333322
Q ss_pred HHHcCCcEEEEEecCccccccC-CCcceeEEeecChhhHHHHHHHH--hhhhhcccCCCChhHHHHHHHHhcChhhHHhH
Q 015435 238 FVADGGECLVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQL--KLVIRPMYSSPPIHGASIVATILKDSTMYKEW 314 (407)
Q Consensus 238 ~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 314 (407)
+.- ..+++ +++|.++ .| ..+|++ +++ +++.+.+...- ..+....+++.+++++.++.+.++...
T Consensus 259 ~gv-~PDi~---t~gK~l~-gG~~p~~av--~~~-~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~----- 325 (422)
T PRK05630 259 AGV-TPDIM---CVGKALT-GGFMSFAAT--LCT-DKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIE----- 325 (422)
T ss_pred cCC-CCCee---eeechhh-cCcccccee--ecc-HHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHH-----
Confidence 211 12233 5799886 56 478888 455 44333322100 001112345677888888777765321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEec---CCCHHHHHHhHhhccEEEcCCC---eEEecC-C
Q 015435 315 TLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFT---GLNSEQVAFMTKEYHIYMTSDG---RISMAG-L 387 (407)
Q Consensus 315 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gi~~~~gg---Ris~~~-~ 387 (407)
+ +..+++++++.+++.+.|+.+.....+..+...|.++... ..+...+...+.++|+.+.+.| ||...- +
T Consensus 326 -~--~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~~~~~~~~~~~~~~~Gl~~~~~g~~l~~~PpL~i 402 (422)
T PRK05630 326 -T--GMWRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGVVEMEQPVDMEEATQAAVDHGVWLRPFGRLVYVMPPYIT 402 (422)
T ss_pred -h--CcHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccccEEEEEECCcccHHHHHHHHHHCCeEEEecCCEEEEECCccC
Confidence 1 1334566666677777666542100122222334333221 1123445555666899998876 665432 5
Q ss_pred CCCChhHHHHHHHHHHHhh
Q 015435 388 SSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 388 ~~e~i~~~~~~l~~~l~~~ 406 (407)
+++++++++++|+++++..
T Consensus 403 t~~~i~~~~~~l~~al~~~ 421 (422)
T PRK05630 403 TSEQIAQICAALAAAVKAK 421 (422)
T ss_pred CHHHHHHHHHHHHHHHhcc
Confidence 8899999999999999764
No 271
>PRK05965 hypothetical protein; Provisional
Probab=99.81 E-value=3.4e-17 Score=158.21 Aligned_cols=350 Identities=12% Similarity=0.069 Sum_probs=207.9
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccC--CCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEY--LPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
...++++||+..|....+.| ..++++++++.+++. .......+ .......++.+++++.. .. ..+.+++
T Consensus 42 D~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~-~~~~~~~~~~~~~~~~~~lae~L~~~~-p~-----~~~~v~f- 112 (459)
T PRK05965 42 DASGHQLLDAFAGLWCVNVG-YGQESIVEAAAEQMR-ELPYATGYFHFGSEPAIRLAAKLAERA-PG-----SLNHVYF- 112 (459)
T ss_pred ECCCCEEEECcccHHhccCC-CCCHHHHHHHHHHHH-hcCCcccccccCCHHHHHHHHHHHhhC-CC-----CcCEEEE-
Confidence 45678999999987766677 667788888888886 21111111 11222335555565544 11 1268999
Q ss_pred ecCCcccHHHHHHHHHHhhc-----C-CCeEEecCCCCCChHHHHh-hc---------Cc---eeeEEEeecCCC--CCc
Q 015435 105 QCLSGTGSLRVGAEFLARHY-----H-QLTIYIPQPTWGNHPKVFT-LA---------GL---SVKTYRYYDPAT--RGL 163 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~-----~-gd~Vi~~~p~y~~~~~~~~-~~---------G~---~~~~v~~~~~~~--~~~ 163 (407)
++||++|++.++++.+... + ..+|+....+|++...... .. |. .+..++...... ...
T Consensus 113 -~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (459)
T PRK05965 113 -TLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGD 191 (459)
T ss_pred -eCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCC
Confidence 9999999999998877652 2 2468888888887753221 11 10 112232211110 111
Q ss_pred C--------hhhHHHHHHcC--CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchh
Q 015435 164 N--------FQGLLEDLRAA--PSGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADA 232 (407)
Q Consensus 164 d--------~~~l~~~i~~~--~~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~ 232 (407)
| ++.+++.+.+. .+..++++-+ .+...|++ .+++.++++.++|++||+++|+||+..+|+..+ ..
T Consensus 192 ~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEP-iqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG---~~ 267 (459)
T PRK05965 192 DPQAIIAASVAALRAKVAELGADNVAAFFCEP-IQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTG---PL 267 (459)
T ss_pred ChHHHHHHHHHHHHHHHHhcCCCceEEEEEec-cccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCc---hh
Confidence 2 25677777532 2345555533 44445664 788999999999999999999999999998765 33
Q ss_pred HHHHHHHHcCCcEEEEEecCccccccC-CCcceeEEeecChhhHHHHHHHHh---hhhhcccCCCChhHHHHHHHHhcCh
Q 015435 233 QSVRMFVADGGECLVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQLK---LVIRPMYSSPPIHGASIVATILKDS 308 (407)
Q Consensus 233 ~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~ 308 (407)
+....+.- ..++++ ++|.++ .| +++|.+ +++ +++.+.+..... .+....+++.+++++.++.+.|+-.
T Consensus 268 ~a~~~~gv-~PDiv~---~gKgl~-gG~~Pi~av--~~~-~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l 339 (459)
T PRK05965 268 FACEAEGV-VPDLMT---VAKGLT-SGYVPMGAV--LMS-DHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLY 339 (459)
T ss_pred hhHhhcCC-CCCeEE---echhhc-cCCcceeEE--EEc-HHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHH
Confidence 44333322 233343 689998 68 599998 455 444333321100 1122345577888888888777532
Q ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEe--c-CC------C-----HHHHHHhHhhccE
Q 015435 309 TMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTF--T-GL------N-----SEQVAFMTKEYHI 374 (407)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~--~-~~------~-----~~~~~~~l~~~gi 374 (407)
+ -+.+.++.+++.++|.+.|+++.....+.-+...|.++.+ . +- + ...+...+.++|+
T Consensus 340 ~--------~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gl 411 (459)
T PRK05965 340 H--------EGGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGL 411 (459)
T ss_pred H--------hccHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCe
Confidence 1 1234456667777777777765310012222333433322 1 10 1 1223444556899
Q ss_pred EEcCCC----eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 375 YMTSDG----RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 375 ~~~~gg----Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
.+.+.| |++..- +++++++++++++.++++++
T Consensus 412 l~~~~g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 412 VFRAFGDGVLGFAPALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred EEEecCCcEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 998865 454321 48899999999999998753
No 272
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.80 E-value=2.6e-17 Score=158.81 Aligned_cols=344 Identities=10% Similarity=0.116 Sum_probs=202.2
Q ss_pred cCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 28 DTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 28 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
..++++||+. |....+.| ..++.+++++.+++. .......+.+.....++.+.+++.. .. ..+.+++ ++
T Consensus 69 ~dG~~ylD~~-g~~~~~lG-h~~p~v~~Ai~~ql~-~~~~~~~~~~~~~~~~lae~L~~~~-p~-----~~~~v~f--~~ 137 (459)
T PRK06082 69 VDGKKYMDFH-GNNVHQLG-YGHPHVIEKVKEQMA-KLPFSPRRFTNETAIECAEKLTEIA-GG-----ELNRVLF--AP 137 (459)
T ss_pred CCCCEEEEcc-cHhhcccC-CCCHHHHHHHHHHHH-hCCCccCccCCHHHHHHHHHHHHhC-CC-----CCCEEEE--CC
Confidence 4578999987 43333456 567788888888875 1111111112333445566666554 21 1268999 99
Q ss_pred CcccHHHHHHHHHHhhcCCCeEEecCCCCCChHH-HHhhcCc------------eeeEEEeecCCC--C-Cc------Ch
Q 015435 108 SGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPK-VFTLAGL------------SVKTYRYYDPAT--R-GL------NF 165 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~-~~~~~G~------------~~~~v~~~~~~~--~-~~------d~ 165 (407)
||++|++.+.++.+......+|+...-+|++... .+...|. .+..+|..+... + .. .+
T Consensus 138 sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (459)
T PRK06082 138 GGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYA 217 (459)
T ss_pred CcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHH
Confidence 9999999999888766555788888888877643 2222221 122222110000 0 00 13
Q ss_pred hhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcE
Q 015435 166 QGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245 (407)
Q Consensus 166 ~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (407)
+.+++.+.+..+..++++-+ .++..+...+++.+++|.++|++||+++|+||+..+|+..+ ..+....+.- ..++
T Consensus 218 ~~l~~~i~~~~~vAavIvEP-v~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG---~~fa~e~~gv-~PDi 292 (459)
T PRK06082 218 DYLEYVIEKEGGIGAFIAEA-VRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTG---EWFTHQAYGI-EPDI 292 (459)
T ss_pred HHHHHHHhcCCCEEEEEECC-ccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hhhHhHhhCC-CCCE
Confidence 45677775433445555533 34434556888999999999999999999999999887654 2333333322 2233
Q ss_pred EEEEecCccccccC-CCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHH
Q 015435 246 LVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADR 324 (407)
Q Consensus 246 i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (407)
++ ++|.++ .| +++|.+ +.. + .+...........+.+.+++++.++.+.|+... + +...++
T Consensus 293 v~---~gKgl~-gG~~P~~av--~~~-~----~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~------~--~~l~~~ 353 (459)
T PRK06082 293 LC---IGKGLG-GGLVPIAAM--ITK-D----KYNTAAQISLGHYTHEKSPLGCAAALATIEVIE------Q--EGLLEK 353 (459)
T ss_pred EE---eccccc-CCCCcceEE--EEc-H----HHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHH------h--cCHHHH
Confidence 33 899998 56 589998 455 3 333222111112355778888888887776321 1 245567
Q ss_pred HHHHHHHHHHHHHhcCCCC-CcccccCCceeEEec---CC-----C---HHHHHHhHhhccEEEcCC-C---eEEecC-C
Q 015435 325 IISMRQQLFDALSARGTPG-DWSHIIKQIGMFTFT---GL-----N---SEQVAFMTKEYHIYMTSD-G---RISMAG-L 387 (407)
Q Consensus 325 ~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~---~~-----~---~~~~~~~l~~~gi~~~~g-g---Ris~~~-~ 387 (407)
.+++.++|.+.|+++-... .+..+...|.++.+- +. + ...+...+.++|+.+.+. + |++..- +
T Consensus 354 ~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~i~~~Ppl~i 433 (459)
T PRK06082 354 VKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVSQGNVIQLSPPLII 433 (459)
T ss_pred HHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEecCCCEEEEeCCCcc
Confidence 7777777777777642100 012223344443321 11 1 122333445689998875 3 666432 5
Q ss_pred CCCChhHHHHHHHHHHHhh
Q 015435 388 SSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 388 ~~e~i~~~~~~l~~~l~~~ 406 (407)
++++++++++++.++++++
T Consensus 434 t~~eid~~~~~l~~~l~~~ 452 (459)
T PRK06082 434 TREELTQALAILEEAIAKI 452 (459)
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 8899999999999988653
No 273
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.80 E-value=2.6e-17 Score=158.63 Aligned_cols=345 Identities=12% Similarity=0.109 Sum_probs=202.9
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC 106 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t 106 (407)
...++++||+..|....+.| ..++.+++++.+++.+-......|.+.....++.+.+++.. .. ..+.+.+ +
T Consensus 49 D~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~-p~-----~~~~v~f--~ 119 (457)
T PRK05639 49 DVDGNVFIDFLAGAAAASTG-YSHPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEIS-PI-----ENPKVLF--G 119 (457)
T ss_pred eCCCCEEEECCcCHHhhccC-CCCHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhC-CC-----CcCEEEE--e
Confidence 34678999999987655667 66778888888887611111112323333445666666644 21 1258999 9
Q ss_pred CCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhh-cC--------c-----eeeEEEeecCCCC--C----cChh
Q 015435 107 LSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTL-AG--------L-----SVKTYRYYDPATR--G----LNFQ 166 (407)
Q Consensus 107 ~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~-~G--------~-----~~~~v~~~~~~~~--~----~d~~ 166 (407)
+||++|++.++++.+......+|+....+|++....... .| . +++.+|..+.... . -+.+
T Consensus 120 ~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 199 (457)
T PRK05639 120 LSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPD 199 (457)
T ss_pred CchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHH
Confidence 999999999998887766666888888888876543221 11 1 1333433211100 0 0222
Q ss_pred --------hHHHHHHc----CCCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhH
Q 015435 167 --------GLLEDLRA----APSGAIVLLHACAHNPTGV-DPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQ 233 (407)
Q Consensus 167 --------~l~~~i~~----~~~~~~v~i~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~ 233 (407)
.+++.+.. ..+..++++ -..+...|. ..+.+.+++|.++|++||+++|+||++.+|+..+ ..+
T Consensus 200 ~~~~~~~~~le~~l~~~~~~~~~iAAvI~-EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG---~~~ 275 (457)
T PRK05639 200 ELINRFLDYLENYVFSHVVPPDEVAALFA-EPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTG---KWF 275 (457)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCceEEEEE-CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCc---hHH
Confidence 34443321 133455555 333444566 4679999999999999999999999999887654 233
Q ss_pred HHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHh
Q 015435 234 SVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKE 313 (407)
Q Consensus 234 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 313 (407)
....+.- ..++++ ++|.++ .|+++|.+ ++. ++ +.+.... ....+.+.+++++.++.+.++...
T Consensus 276 a~~~~gv-~PDiv~---~gK~l~-gG~pi~av--~~~-~~----i~~~~~~-~~~~T~~g~p~~~aaa~a~l~~l~---- 338 (457)
T PRK05639 276 ASEWFEV-KPDLII---FGKGVA-SGMGLSGV--IGR-KE----LMDLTSG-SALLTPAANPVISAAAEATLEIIE---- 338 (457)
T ss_pred HHHhcCC-CCCEEE---echhhc-CCCcceeE--Eeh-HH----HHhhcCC-CcccCCCcCHHHHHHHHHHHHHHH----
Confidence 3333221 223333 799998 68888998 454 33 3331111 112344667777777777765321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCCcccccCCceeEEe--c-CC---CH---HHHHHhHhhccEEEcCCC--
Q 015435 314 WTLELKAMADRIISMRQQLFDALSAR--GTPGDWSHIIKQIGMFTF--T-GL---NS---EQVAFMTKEYHIYMTSDG-- 380 (407)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~--~-~~---~~---~~~~~~l~~~gi~~~~gg-- 380 (407)
-+...++.+++.++|.+.|+++ +.+ ....+...|.++.+ . +. +. ..+...+.++|+.+.+.|
T Consensus 339 ----~~~l~~~~~~~g~~l~~~L~~l~~~~~-~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~g~~ 413 (457)
T PRK05639 339 ----EENLLKNALKVGEFIKKRLLEMKESFE-VIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAFELGLILPSYGMF 413 (457)
T ss_pred ----HccHHHHHHHHHHHHHHHHHHHHHhCC-CEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeecCCC
Confidence 1234455556677777777663 211 01222333433332 1 11 11 223444455899997743
Q ss_pred ----eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 381 ----RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 381 ----Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
||+..- +++++++++++++.++++++
T Consensus 414 ~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~ 444 (457)
T PRK05639 414 GNVIRITPPLVITKEIAEKGLEIMERAIKDA 444 (457)
T ss_pred CCEEEEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 665442 58899999999999998653
No 274
>PRK07678 aminotransferase; Validated
Probab=99.80 E-value=3.1e-17 Score=158.24 Aligned_cols=348 Identities=12% Similarity=0.079 Sum_probs=203.2
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccc-cCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVK-EYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
...++++||+..|....+.| ..++++++++.+++. ...... .| +.....++.+.+++.. +. .+.+++
T Consensus 43 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~-~~~~~~~~~-~~~~~~~lae~l~~~~-~~------~~~v~f-- 110 (451)
T PRK07678 43 DIQGNRYLDGMSGLWCVNVG-YGRKELAEAAYEQLK-TLSYFPLTQ-SHEPAIKLAEKLNEWL-GG------EYVIFF-- 110 (451)
T ss_pred eCCCCEEEEccccHHhhcCC-CCCHHHHHHHHHHHH-hcCcccccc-CCHHHHHHHHHHHHhC-CC------CCEEEE--
Confidence 45679999999987655667 667788888888876 111111 12 2222345555555544 21 257899
Q ss_pred cCCcccHHHHHHHHHHhhc-----CC-CeEEecCCCCCChHHHHhhc-Cc------------eeeEEEeecCCCC--C--
Q 015435 106 CLSGTGSLRVGAEFLARHY-----HQ-LTIYIPQPTWGNHPKVFTLA-GL------------SVKTYRYYDPATR--G-- 162 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~-----~g-d~Vi~~~p~y~~~~~~~~~~-G~------------~~~~v~~~~~~~~--~-- 162 (407)
++||++|++.++++.+... +| .+|+...-+|++........ |. .+..+|..+.... +
T Consensus 111 ~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (451)
T PRK07678 111 SNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIES 190 (451)
T ss_pred eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCC
Confidence 9999999999998887653 23 47888888888765433321 11 1222222110000 0
Q ss_pred ---cC---hhhHHHHHH-cC-CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhH
Q 015435 163 ---LN---FQGLLEDLR-AA-PSGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQ 233 (407)
Q Consensus 163 ---~d---~~~l~~~i~-~~-~~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~ 233 (407)
.+ ++.+++.+. +. ++..++++-+ .+.-.|.+ .+++.++++.++|++||+++|+||+..+|+..+ ..+
T Consensus 191 ~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EP-iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~ 266 (451)
T PRK07678 191 EDIYDLECVKEIDRVMTWELSETIAAVIMEP-IITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTG---KAF 266 (451)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCceEEEEEcc-ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCc---hhH
Confidence 01 123455564 22 3345555533 33334555 788999999999999999999999999998754 234
Q ss_pred HHHHHHHcCCcEEEEEecCccccccC-CCcceeEEeecChhhHHHHHHHHh--hhhhcccCCCChhHHHHHHHHhcChhh
Q 015435 234 SVRMFVADGGECLVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQLK--LVIRPMYSSPPIHGASIVATILKDSTM 310 (407)
Q Consensus 234 ~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~ 310 (407)
....+.- ..+++ +++|.++ .| +++|.+ ++. +++.+.+..... .+....+++.+++++.++.+.|+...
T Consensus 267 ~~~~~gv-~PDiv---t~gK~lg-gG~~Pi~av--~~~-~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~- 337 (451)
T PRK07678 267 GFMNYGV-KPDII---TMAKGIT-SAYLPLSAT--AVK-KEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIME- 337 (451)
T ss_pred HHHhcCC-CCCEE---Eeecccc-cCCcceeEE--EEc-HHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHH-
Confidence 4433321 22333 4799998 56 799998 455 444333321100 01123455778888888888776331
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCCcccccCCceeEEec---C------CCH---HHHHHhHhhccEEE
Q 015435 311 YKEWTLELKAMADRIISMRQQLFDALSAR--GTPGDWSHIIKQIGMFTFT---G------LNS---EQVAFMTKEYHIYM 376 (407)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~---~------~~~---~~~~~~l~~~gi~~ 376 (407)
+ +...++.+++.++|.+.|++. ..+ .+..+...|.++.+. + .+. ..+...+.++||.+
T Consensus 338 -----~--~~~~~~~~~~g~~l~~~l~~~~~~~~-~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~ 409 (451)
T PRK07678 338 -----N--ENLIERSAQLGELLLEQLKEELGEHP-LVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACKEKGLII 409 (451)
T ss_pred -----h--CCHHHHHHHHHHHHHHHHHHHHhcCC-CEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEE
Confidence 1 134455666666666666542 111 012223334433321 1 111 22344455689998
Q ss_pred cCC--------C--eEEecC-CCCCChhHHHHHHHHHHHhhC
Q 015435 377 TSD--------G--RISMAG-LSSKTVPHLTDAIHAAVTRMG 407 (407)
Q Consensus 377 ~~g--------g--Ris~~~-~~~e~i~~~~~~l~~~l~~~~ 407 (407)
.+. . ||+... ++++|++++++++.+++++++
T Consensus 410 ~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (451)
T PRK07678 410 GKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERIK 451 (451)
T ss_pred eecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhcC
Confidence 652 2 555442 588999999999999998763
No 275
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.80 E-value=3.2e-17 Score=157.63 Aligned_cols=350 Identities=14% Similarity=0.083 Sum_probs=203.3
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccC-CCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEY-LPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y-~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
..+++.+||+..|....+.| ..++.+++++.+++. .......+ .+.....++.+.+++...+ ..+.+.+
T Consensus 42 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~-~l~~~~~~~~~~~~~~~la~~l~~~~p~------~~~~v~f-- 111 (442)
T PRK13360 42 THDGRRVLDGTAGLWCVNAG-HGRPEIVEAVRAQAG-ELDYAPAFQMGHPKAFELANRIAEIAPG------GLNHVFF-- 111 (442)
T ss_pred eCCCCEEEECchhHHHhccC-CCCHHHHHHHHHHHH-hCCCcccCCcCCHHHHHHHHHHHHhCCC------CCCEEEE--
Confidence 34678999999887655667 667788888888875 11111111 1112233455555554411 1268999
Q ss_pred cCCcccHHHHHHHHHHhhc-----C-CCeEEecCCCCCChHHHHh-hcC------------ceeeEEEeecC-CC--CCc
Q 015435 106 CLSGTGSLRVGAEFLARHY-----H-QLTIYIPQPTWGNHPKVFT-LAG------------LSVKTYRYYDP-AT--RGL 163 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~-----~-gd~Vi~~~p~y~~~~~~~~-~~G------------~~~~~v~~~~~-~~--~~~ 163 (407)
+++|++|++.++++.+... + ..+|+...-+|++...... ..| ..+..+|.... .. +..
T Consensus 112 ~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 191 (442)
T PRK13360 112 TNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSK 191 (442)
T ss_pred eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCC
Confidence 9999999999998877653 2 2578988888887643221 111 11222332100 00 111
Q ss_pred --------ChhhHHHHHHcC--CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchh
Q 015435 164 --------NFQGLLEDLRAA--PSGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADA 232 (407)
Q Consensus 164 --------d~~~l~~~i~~~--~~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~ 232 (407)
..+.+++.+... .+..++++ -..+...|.. .+++.+++|.++|++||+++|+||++.+|+..+ ..
T Consensus 192 ~~~~~~~~~~~~le~~l~~~~~~~~aaviv-Epi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG---~~ 267 (442)
T PRK13360 192 GQPEHGAELADELERLVTLHDASTIAAVIV-EPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLG---AP 267 (442)
T ss_pred ChHHHHHHHHHHHHHHHHhcCCCcEEEEEE-ccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc---cc
Confidence 145677777532 22334444 3334344655 678899999999999999999999998887654 22
Q ss_pred HHHHHHHHcCCcEEEEEecCccccccC-CCcceeEEeecChhhHHHHHHHHh---hhhhcccCCCChhHHHHHHHHhcCh
Q 015435 233 QSVRMFVADGGECLVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQLK---LVIRPMYSSPPIHGASIVATILKDS 308 (407)
Q Consensus 233 ~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~ 308 (407)
+....+.-. .+ + -+++|.++ .| +++|.+ +++ +++.+.+...-. .+....+++.+++++.++.+.|+-.
T Consensus 268 ~a~~~~gv~-PD-i--vt~gK~l~-gG~~P~gav--~~~-~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l 339 (442)
T PRK13360 268 FAAQYFGVT-PD-L--LTCAKGLT-NGAIPMGAV--FVS-SEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLY 339 (442)
T ss_pred hhhhhcCCC-Cc-e--eeeeeccc-cCccceEEE--EEc-HHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHH
Confidence 322222111 22 2 26899997 45 788998 465 443333221100 0112234567888888888777532
Q ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEE--ecCC----C--HHHHHHhHhhccEEEcCCC
Q 015435 309 TMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFT--FTGL----N--SEQVAFMTKEYHIYMTSDG 380 (407)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~----~--~~~~~~~l~~~gi~~~~gg 380 (407)
. + +.+.++.+++.+++.+.|+++.....+..+...|.++. +... . ...+...+.++||.+.+.+
T Consensus 340 ~------~--~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~~ 411 (442)
T PRK13360 340 E------R--EGLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYTG 411 (442)
T ss_pred H------h--CCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEecC
Confidence 1 1 23556777777888888876531000111222222211 1111 1 1233344556899998876
Q ss_pred ---eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 381 ---RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 381 ---Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
||+..- ++++++++++++|.++++++
T Consensus 412 ~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 412 DILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred CEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 777432 58899999999999999764
No 276
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.80 E-value=3.1e-17 Score=140.68 Aligned_cols=324 Identities=14% Similarity=0.168 Sum_probs=208.8
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcc
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGT 110 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t 110 (407)
...+||-+ +....|....++++.... ..++. |+......+|.+.+|+.+ ++ +.-+| ++|||
T Consensus 21 ~~~vDLRS------DTvT~PTdeMr~am~eA~-vgDdV--yGeD~tt~rLE~~vA~l~-GK-------EAgLF--v~SGT 81 (384)
T KOG1368|consen 21 HRSVDLRS------DTVTVPTDEMRRAMAEAS-VGDDV--YGEDPTTNRLEQRVAELF-GK-------EAGLF--VPSGT 81 (384)
T ss_pred eecccccc------ccccCChHHHHHHHhhcc-cCccc--ccCCccHHHHHHHHHHHh-Cc-------cceee--ecccc
Confidence 35566663 343567777777766664 22333 545556678999999988 76 66777 88888
Q ss_pred cHHHHHHHHHHhhc-CCCeEEecCCCCC-ChHH--HHhhcCceeeEEEeecCCCCCcChhhHHHHHHc------CCCCcE
Q 015435 111 GSLRVGAEFLARHY-HQLTIYIPQPTWG-NHPK--VFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRA------APSGAI 180 (407)
Q Consensus 111 ~a~~~~~~~~~~~~-~gd~Vi~~~p~y~-~~~~--~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~------~~~~~~ 180 (407)
.++.++ ++..+. +|..||+-+-++. .|.. +....|+.++++.- ++++.+++++++..+.. .|.+++
T Consensus 82 mgNlla--Im~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~--e~dgtm~ledIe~~ir~~~GD~H~p~T~L 157 (384)
T KOG1368|consen 82 MGNLLA--IMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKN--ENDGTMDLEDIEAAIRVPKGDCHMPPTKL 157 (384)
T ss_pred cccHHH--HHHHhcCCCceEEeccchheeehhccChhhhccceeEeeee--CCCCeeeHHHHHHhhcCCCCCccCCCceE
Confidence 888887 355565 8999999987764 2222 33466777777765 66678999999999863 256788
Q ss_pred EEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCC
Q 015435 181 VLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGE 260 (407)
Q Consensus 181 v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 260 (407)
|++-++-+|-.|.++|.+++.++.++|++||+.|.+|.+.-.-... ....++..+....|.+-++ +||.+|.
T Consensus 158 IclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAav---asgV~vk~i~~~fDSVsiC--LSKglgA--- 229 (384)
T KOG1368|consen 158 ICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAV---ASGVPVKKICSAFDSVSIC--LSKGLGA--- 229 (384)
T ss_pred EEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHH---HcCCCHHHHHHhhhhhhhh--hhccCCC---
Confidence 8885554444459999999999999999999999999984221111 0122444455444544333 7898764
Q ss_pred CcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015435 261 RVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARG 340 (407)
Q Consensus 261 r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 340 (407)
++|.+ ++++++ ++++.+.+......+.-..++.++++...-.+ . .. ..+.-.++...+.+.++..+
T Consensus 230 PVGSV--iVG~k~----FI~kA~~~RKalGGGmRQsGvLaaaaLval~~---~----~~-~L~~dHk~A~~lAe~~~~~~ 295 (384)
T KOG1368|consen 230 PVGSV--IVGSKD----FIDKARHFRKALGGGMRQSGVLAAAALVALDE---N----VP-LLRADHKRAKELAEYINTPE 295 (384)
T ss_pred CcccE--EEccHH----HHHHHHHHHHHhcCchhHHHHHHHHHHHHhhc---c----hH-HHHHHHHHHHHHHHHhcccc
Confidence 48998 466554 55555555544444444444444443332111 1 11 22333455566777777655
Q ss_pred C-CCCcccccCCceeEEe----cCCCHHHHHHhHhhccEEEcCCC----eEEecC-CCCCChhHHHHHHHH
Q 015435 341 T-PGDWSHIIKQIGMFTF----TGLNSEQVAFMTKEYHIYMTSDG----RISMAG-LSSKTVPHLTDAIHA 401 (407)
Q Consensus 341 ~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~gi~~~~gg----Ris~~~-~~~e~i~~~~~~l~~ 401 (407)
. . +++...+.++... .+++.+.+-..+++.||.+.++. ||.+.+ ++.++++.+...+..
T Consensus 296 ~i~--v~v~a~etNiv~~~l~q~~~~~~~l~~~~~k~gi~lm~~~s~r~Rivlh~Qvt~~~ve~~~~~~~k 364 (384)
T KOG1368|consen 296 EIR--VEVPAVETNIVNMVLCQARLTAEELCKFLEKNGILLMGGASRRIRIVLHHQVTDEDVEYVKSVLSK 364 (384)
T ss_pred cee--eecchhhcceeeeecccccCCHHHHHHHHHHCCeEEeeccccceEEEEEEecCHHHHHHHHHHHHH
Confidence 2 1 2333234443332 37788888777788999999885 777765 788999999998843
No 277
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.80 E-value=6.7e-17 Score=156.13 Aligned_cols=349 Identities=9% Similarity=0.049 Sum_probs=206.3
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccc--cCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVK--EYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
...++.+||+..|....+.| ..++.+++++.+++. ...... .| ......++.+.+++.. .. ..+.+++
T Consensus 43 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~ql~-~l~~~~~~~~-~~~~~~~lae~L~~~~-p~-----~~~~v~f- 112 (466)
T PRK07030 43 DFEGKRYLDAVSSWWVNVFG-HANPRINQRIKDQVD-QLEHVILAGF-SHEPVIELSERLVKIT-PP-----GLSRCFY- 112 (466)
T ss_pred ECCCCEEEEcchhHHhhcCC-CCCHHHHHHHHHHHH-hcCCcccccc-CCHHHHHHHHHHHHhC-CC-----CcCEEEE-
Confidence 45679999999987655567 667788888888876 111111 12 1222344555555533 11 1268999
Q ss_pred ecCCcccHHHHHHHHHHhhc-----C-CCeEEecCCCCCChHHHHhhc-Cc------------eeeEEEeecCC--CCCc
Q 015435 105 QCLSGTGSLRVGAEFLARHY-----H-QLTIYIPQPTWGNHPKVFTLA-GL------------SVKTYRYYDPA--TRGL 163 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~-----~-gd~Vi~~~p~y~~~~~~~~~~-G~------------~~~~v~~~~~~--~~~~ 163 (407)
+++|++|++.++++.+... . ..+|+...-+|++........ |. .+..+|..+.. ..+.
T Consensus 113 -~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~ 191 (466)
T PRK07030 113 -ADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGM 191 (466)
T ss_pred -eCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCC
Confidence 9999999999988876541 2 356888888888765433221 11 12223321100 0011
Q ss_pred --------ChhhHHHHHHcCCC-CcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhH
Q 015435 164 --------NFQGLLEDLRAAPS-GAIVLLHACAHNPTGV-DPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQ 233 (407)
Q Consensus 164 --------d~~~l~~~i~~~~~-~~~v~i~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~ 233 (407)
+++.+++.+.+.+. ..++++-+-.+...|. ..+++.++++.++|++||+++|+||+..+|+..+ ..+
T Consensus 192 ~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG---~~~ 268 (466)
T PRK07030 192 SWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTG---TMF 268 (466)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccc---cch
Confidence 24556777764333 3444442212344466 4778999999999999999999999999998754 334
Q ss_pred HHHHHHHcCCcEEEEEecCccccccC-CCcceeEEeecChhhHHHHHHHH---hhhhhcccCCCChhHHHHHHHHhcChh
Q 015435 234 SVRMFVADGGECLVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQL---KLVIRPMYSSPPIHGASIVATILKDST 309 (407)
Q Consensus 234 ~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~ 309 (407)
....+.- ..++++ ++|.++ .| +++|.+ +++ +++.+.+.... ..+....+++.+++++.++.+.|+-..
T Consensus 269 a~~~~gv-~PDiv~---~gKgl~-gG~~Pi~av--~~~-~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~ 340 (466)
T PRK07030 269 ACEQAGI-RPDFLC---LSKALT-GGYLPLAAV--LTT-DTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFE 340 (466)
T ss_pred HHHhcCC-CCCEEe---eehhcc-CCcccceEE--Eec-HHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHH
Confidence 4333322 233343 589998 68 599998 454 44433332110 011223445678888888888776321
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCC------------CH---HHHHHhHhhccE
Q 015435 310 MYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL------------NS---EQVAFMTKEYHI 374 (407)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~------------~~---~~~~~~l~~~gi 374 (407)
-+.+.++.+++.+++.+.|+++.....+.-+...|.++. +.+ +. ..+...+.++|+
T Consensus 341 --------~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~g-ie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gv 411 (466)
T PRK07030 341 --------QDNVIENNRALARRMAEATAHLADHPHVAEVRQTGMILA-IEMVQDKASKTPYPWQERRGLKVYQHALERGA 411 (466)
T ss_pred --------hcCHHHHHHHHHHHHHHHHHHHhcCCCEEEeEeceeEEE-EEeccCccccccCcchhHHHHHHHHHHHHCCe
Confidence 123456666777777777766521001222233343332 211 01 123344556899
Q ss_pred EEcCCC---eEEec-CCCCCChhHHHHHHHHHHHhh
Q 015435 375 YMTSDG---RISMA-GLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 375 ~~~~gg---Ris~~-~~~~e~i~~~~~~l~~~l~~~ 406 (407)
.+.+.| |+... .+++++++.+++++.++++++
T Consensus 412 l~~~~g~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 412 LLRPLGSVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred EEEecCCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 998866 66533 258899999999999999864
No 278
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.80 E-value=8.7e-17 Score=154.74 Aligned_cols=349 Identities=13% Similarity=0.078 Sum_probs=204.8
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccC-CCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEY-LPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y-~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
...++++||+..|....+.| ..++.+++++.+++. .......+ .......++.+.+++.. .. ..+.+++
T Consensus 45 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~-~l~~~~~~~~~~~~~~~la~~L~~~~-p~-----~~~~v~f-- 114 (445)
T PRK09221 45 DADGRKILDGTAGLWCCNAG-HGRPEIVEAVARQAA-TLDYAPAFQMGHPLAFELAERLAELA-PG-----GLDHVFF-- 114 (445)
T ss_pred eCCCCEEEEccccHhhccCC-CCCHHHHHHHHHHHH-hccCccccccCCHHHHHHHHHHHHhC-CC-----CCCEEEE--
Confidence 35678999999997655667 667788888888875 11111111 11222334555555544 11 1268999
Q ss_pred cCCcccHHHHHHHHHHhhc-----C-CCeEEecCCCCCChHHHHhhc-C------------ceeeEEEeec-CC--CCCc
Q 015435 106 CLSGTGSLRVGAEFLARHY-----H-QLTIYIPQPTWGNHPKVFTLA-G------------LSVKTYRYYD-PA--TRGL 163 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~-----~-gd~Vi~~~p~y~~~~~~~~~~-G------------~~~~~v~~~~-~~--~~~~ 163 (407)
++||++|++.++++.+.+. + ..+|+...-+|++........ | ..+..+|... .. .++.
T Consensus 115 ~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (445)
T PRK09221 115 TNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSK 194 (445)
T ss_pred eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCC
Confidence 9999999999998877653 1 247888888887764322211 1 1122233210 00 0010
Q ss_pred --------ChhhHHHHHHcC--CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchh
Q 015435 164 --------NFQGLLEDLRAA--PSGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADA 232 (407)
Q Consensus 164 --------d~~~l~~~i~~~--~~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~ 232 (407)
..+++++.+... .+..++++ -......|.. .+.+.+++|.++|++||+++|+||++.+|+..+ ..
T Consensus 195 ~~~~~~~~~~~~l~~~i~~~~~~~iAavi~-Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG---~~ 270 (445)
T PRK09221 195 GQPEHGAELADDLERLVALHDASTIAAVIV-EPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLG---AA 270 (445)
T ss_pred ChHHHHHHHHHHHHHHHHhcCCCcEEEEEE-ecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCc---hh
Confidence 135667767533 23345555 3344445664 678889999999999999999999998887654 23
Q ss_pred HHHHHHHHcCCcEEEEEecCccccccC-CCcceeEEeecChhhHHHHHHHHh---hhhhcccCCCChhHHHHHHHHhcCh
Q 015435 233 QSVRMFVADGGECLVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQLK---LVIRPMYSSPPIHGASIVATILKDS 308 (407)
Q Consensus 233 ~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~ 308 (407)
+....+.-.. + +-+++|.++ .| +++|.+ +++ +++.+.+...-. .+....+.+.+++++.++.+.|+..
T Consensus 271 ~~~~~~gv~P-D---i~~~gK~l~-gG~~Pi~av--~~~-~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i 342 (445)
T PRK09221 271 FAAERFGVTP-D---IITFAKGLT-NGAIPMGAV--IAS-DEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIY 342 (445)
T ss_pred hHHHhcCCCC-C---EEEeccccc-cCcccceee--EEc-HHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHH
Confidence 3333321112 2 235899997 45 688888 455 444333321000 1112234567788887777766532
Q ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCcccccCCceeEE--ecCC---C---HHHHHHhHhhccEEEcCC
Q 015435 309 TMYKEWTLELKAMADRIISMRQQLFDALSARG-TPGDWSHIIKQIGMFT--FTGL---N---SEQVAFMTKEYHIYMTSD 379 (407)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~--~~~~---~---~~~~~~~l~~~gi~~~~g 379 (407)
. + +.+.++.+++.+++.+.|+++. .+ .+..+...|.+.. +... + ...+.+.+.++||.+.++
T Consensus 343 ~------~--~~l~~~~~~~g~~l~~~l~~l~~~~-~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~ 413 (445)
T PRK09221 343 R------E--EDLFERAAELAPYFEDAVHSLKGLP-HVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYT 413 (445)
T ss_pred H------h--ccHHHHHHHHHHHHHHHHHhhccCC-CEEEEecCceEEEEEEecccccccchHHHHHHHHHHCCeEEeec
Confidence 1 1 2356777788888888887762 11 1121222232221 1111 1 123445555689999887
Q ss_pred C---eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 380 G---RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 380 g---Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
| ||+..- ++++++++++++|+++++++
T Consensus 414 ~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 414 GDTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred CCEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 6 776432 58899999999999999764
No 279
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.79 E-value=7e-17 Score=156.04 Aligned_cols=351 Identities=10% Similarity=0.039 Sum_probs=207.7
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhcccccccc-CCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKE-YLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
...++++||+..|....+.| ..++++++++.+++. ....... +.......++.+.+++.. .. ..+.+++
T Consensus 52 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~ql~-~l~~~~~~~~~~~~~~~lae~L~~~~-p~-----~~~~v~f-- 121 (460)
T PRK06916 52 DVNGNEYYDGVSSIWLNVHG-HQVPELDEAIREQLN-KIAHSTLLGLANVPSILLAEKLIEVV-PE-----GLKKVFY-- 121 (460)
T ss_pred eCCCCEEEEcchhHHHhhcC-CCCHHHHHHHHHHHH-hCCCccccccCCHHHHHHHHHHHHhC-CC-----CCCEEEE--
Confidence 45678999998886544566 667788888888886 2111111 112223345556666544 11 1258999
Q ss_pred cCCcccHHHHHHHHHHhh-----cC-CCeEEecCCCCCChHHHHhhc-Cc------------eeeEEEeecCC--CCC--
Q 015435 106 CLSGTGSLRVGAEFLARH-----YH-QLTIYIPQPTWGNHPKVFTLA-GL------------SVKTYRYYDPA--TRG-- 162 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~-----~~-gd~Vi~~~p~y~~~~~~~~~~-G~------------~~~~v~~~~~~--~~~-- 162 (407)
++||++|++.++++.+.. .+ ..+|+...-+|++........ |. .+..+|..+.. ..+
T Consensus 122 ~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~ 201 (460)
T PRK06916 122 SDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGND 201 (460)
T ss_pred eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCC
Confidence 999999999999887764 23 357888888888765433221 11 12223321100 001
Q ss_pred ------cChhhHHHHHHcCCC-CcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHH
Q 015435 163 ------LNFQGLLEDLRAAPS-GAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQS 234 (407)
Q Consensus 163 ------~d~~~l~~~i~~~~~-~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~ 234 (407)
-+++++++.+...+. ..++++-+-.+...|.+ ++++.++++.++|++||+++|+||+..+|+..+ ..+.
T Consensus 202 ~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG---~~~a 278 (460)
T PRK06916 202 KAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTG---KMFA 278 (460)
T ss_pred hHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCc---hhhH
Confidence 135566777764333 34444422124555665 699999999999999999999999999887654 3333
Q ss_pred HHHHHHcCCcEEEEEecCccccccC-CCcceeEEeecChhhHHHHHHHH---hhhhhcccCCCChhHHHHHHHHhcChhh
Q 015435 235 VRMFVADGGECLVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQL---KLVIRPMYSSPPIHGASIVATILKDSTM 310 (407)
Q Consensus 235 ~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 310 (407)
...+.- ..+++ .++|.++ .| +++|.+ ++. +++.+.+.... ..+....+.+.+++++.++.+.|+...
T Consensus 279 ~~~~gv-~PDiv---~~gK~l~-gG~~Pi~av--~~~-~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~- 349 (460)
T PRK06916 279 CEHENV-TPDIM---TAGKGLT-GGYLPIAIT--VTT-DEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYE- 349 (460)
T ss_pred HHhcCC-CCCee---eeehhhh-cCcccccee--eec-HHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHH-
Confidence 333322 22333 3799998 67 599998 455 44333322111 111122345678888888887775321
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEe--c-CC--------C---HHHHHHhHhhccEEE
Q 015435 311 YKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTF--T-GL--------N---SEQVAFMTKEYHIYM 376 (407)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~--~-~~--------~---~~~~~~~l~~~gi~~ 376 (407)
+ +.+.++++++.+++.+.|+++.....+..+...|.++.+ . +- + ...+...+.++||.+
T Consensus 350 -----~--~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~ 422 (460)
T PRK06916 350 -----K--TNLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLT 422 (460)
T ss_pred -----h--ccHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEE
Confidence 1 234566777777777777765210012122333433332 1 10 0 123444455689999
Q ss_pred cCCC---eEEec-CCCCCChhHHHHHHHHHHHhh
Q 015435 377 TSDG---RISMA-GLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 377 ~~gg---Ris~~-~~~~e~i~~~~~~l~~~l~~~ 406 (407)
.+.| |+... .+++++++.++++|.++++++
T Consensus 423 ~~~g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 423 RPLGNTIVFMPPLASTIDELDEMLRILYKAISDV 456 (460)
T ss_pred EecCCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 9876 66533 258899999999999999764
No 280
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.79 E-value=2e-17 Score=154.53 Aligned_cols=320 Identities=13% Similarity=0.070 Sum_probs=197.2
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC 106 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t 106 (407)
...++.++|+..|....+.| ..++++++++.+++. .........+.....++.++++++. +. +.+++ +
T Consensus 20 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~-~~~~~~~~~~~~~~~~la~~l~~~~-~~-------~~v~~--~ 87 (364)
T PRK04013 20 DSQGRRYLDLIAGIGVNVLG-HNHPEWVEEMSEQLE-KLVVAGPMFEHEEKEEMLEELSKWV-NY-------EYVYM--G 87 (364)
T ss_pred ECCCCEEEEcccChhhccCC-CCCHHHHHHHHHHHH-hcCCccCCcCCHHHHHHHHHHHhhc-CC-------CEEEE--e
Confidence 34678999999887655667 667788888888876 2111111112334455666666654 22 68999 9
Q ss_pred CCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhc--------Cce-----eeEEEeecCCCCCcChhhHHHHHH
Q 015435 107 LSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLA--------GLS-----VKTYRYYDPATRGLNFQGLLEDLR 173 (407)
Q Consensus 107 ~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~--------G~~-----~~~v~~~~~~~~~~d~~~l~~~i~ 173 (407)
+||++|++.++++.......++|+....+|++........ +.. +..+|. .|++.+++.+.
T Consensus 88 ~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~i~ 160 (364)
T PRK04013 88 NSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF-------NDVEAAKEAIT 160 (364)
T ss_pred CchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC-------CCHHHHHHHhc
Confidence 9999999999888776654489999998888765433321 111 111211 26788888886
Q ss_pred cCCCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecC
Q 015435 174 AAPSGAIVLLHACAHNPTGV-DPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYA 252 (407)
Q Consensus 174 ~~~~~~~v~i~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 252 (407)
++..++++. ..+...|. ..+++.++++.++|++||+++|+||+..++ ..+ ..+....+ ....++++ ++
T Consensus 161 --~~~aAvivE-pi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG---~~~a~~~~-gv~PDiv~---~g 229 (364)
T PRK04013 161 --KETAAVIFE-PIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTG---KFLAIEHY-KVEPDIVT---MG 229 (364)
T ss_pred --CCcEEEEEc-CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCC---chhHHHhc-CCCCCEEE---ec
Confidence 456676663 33333444 467789999999999999999999999988 543 23333333 22233333 69
Q ss_pred ccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHH
Q 015435 253 KNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQL 332 (407)
Q Consensus 253 K~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 332 (407)
|.++ .|+++|.+ +.. ++ +. ......+++.+++++.++.+.|+-.+ + +.+.++.++. +
T Consensus 230 K~lg-gG~P~~a~--~~~-~~----~~----~~~~~~T~~gnp~~~aaa~a~l~~i~------~--~~l~~~~~~~---l 286 (364)
T PRK04013 230 KGIG-NGVPVSLT--LTN-FD----VE----RGKHGSTFGGNPLACKAVAVTLRILR------R--ERLVEKAGEK---F 286 (364)
T ss_pred cccc-CCceeEEE--Eec-cc----cc----CCCcCCCCCcCHHHHHHHHHHHHHHH------h--ccHHHHHHHH---H
Confidence 9998 58999998 454 22 21 11223455788888888887776321 1 1111222211 2
Q ss_pred HHHHHhcCCCCCcccccCCceeEEecCCC--HHHHHHhHhhccEEEcCCC----eEEecC-CCCCChhHHHHHHHHHHHh
Q 015435 333 FDALSARGTPGDWSHIIKQIGMFTFTGLN--SEQVAFMTKEYHIYMTSDG----RISMAG-LSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 333 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gi~~~~gg----Ris~~~-~~~e~i~~~~~~l~~~l~~ 405 (407)
+.+.. +. +.-+...| ++.-+.+. ...+...+.++|+.+.+.| ||...- ++++++++++++|.+++++
T Consensus 287 -~~l~~-~~---v~~vRG~G-l~~gve~~~~~~~i~~~~~~~Gll~~~~g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~ 360 (364)
T PRK04013 287 -IEIKG-ER---VVTTRGRG-LMIGIVLKKPVGKYVEELQNRGYLVHTAGQRVIRLLPPLIISKDTMEEAKSAIEGVIND 360 (364)
T ss_pred -HHhcc-Cc---ceeeeeCc-EEEEEEeCCcHHHHHHHHHhCCcEEeeCCCCEEEEeCCcccCHHHHHHHHHHHHHHHHH
Confidence 12211 10 22223333 33323332 3344455556899998765 775442 5889999999999999875
No 281
>PRK06105 aminotransferase; Provisional
Probab=99.79 E-value=5.7e-17 Score=156.67 Aligned_cols=350 Identities=13% Similarity=0.077 Sum_probs=205.1
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCC--CCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYL--PIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~--~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
...++++||+..|....+.| ..++.+++++.+++. .......+. ......++.+.+++.. .. ..+.+++
T Consensus 44 D~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~-~~~~~~~~~~~~~~~~~~lae~L~~~~-p~-----~~~~v~f- 114 (460)
T PRK06105 44 DDAGKRYIEGMAGLWSVALG-FSEQRLVEAAARQMK-KLPFYHTFSHKSHGPVIDLAEKLVAMA-PV-----PMSKVFF- 114 (460)
T ss_pred ECCCCEEEEcchhHHhccCC-CCCHHHHHHHHHHHH-hCCCeecccccCCHHHHHHHHHHHHhC-CC-----CCCEEEE-
Confidence 45679999999987655677 667788888888886 211111111 1222334555555544 21 1268999
Q ss_pred ecCCcccHHHHHHHHHHhhc-----CC-CeEEecCCCCCChHHHHhhc-Cc------------eeeEEEeecCCCCC---
Q 015435 105 QCLSGTGSLRVGAEFLARHY-----HQ-LTIYIPQPTWGNHPKVFTLA-GL------------SVKTYRYYDPATRG--- 162 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~-----~g-d~Vi~~~p~y~~~~~~~~~~-G~------------~~~~v~~~~~~~~~--- 162 (407)
++||++|+++++++..... +| .+|+...-+|++........ |. .+..++..+....+
T Consensus 115 -~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 193 (460)
T PRK06105 115 -TNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPG 193 (460)
T ss_pred -eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCC
Confidence 9999999999988865442 23 46888888887665332211 11 12222221100000
Q ss_pred --------cChhhHHHHHHc-CCC-CcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCch
Q 015435 163 --------LNFQGLLEDLRA-APS-GAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDAD 231 (407)
Q Consensus 163 --------~d~~~l~~~i~~-~~~-~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~ 231 (407)
...+++++.+.. .++ ..++++ -.-+.-.|.. .+++.++++.++|++||+++|+||++.+|+..+ +
T Consensus 194 ~~~~~~~~~~~~~le~~~~~~~~~~iAavIv-EPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG---~ 269 (460)
T PRK06105 194 ESEEAFATRLANELEALILAEGPDTIAAFIG-EPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTG---N 269 (460)
T ss_pred CChHHHHHHHHHHHHHHHHHcCCCceEEEEE-ccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCc---h
Confidence 013556776642 223 345555 3334444554 689999999999999999999999999897654 3
Q ss_pred hHHHHHHHHcCCcEEEEEecCccccccC-CCcceeEEeecChhhHHHHHHHHh---hhhhcccCCCChhHHHHHHHHhcC
Q 015435 232 AQSVRMFVADGGECLVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQLK---LVIRPMYSSPPIHGASIVATILKD 307 (407)
Q Consensus 232 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~ 307 (407)
.+....+.- ..+++ +++|.++ .| +++|.+ +++ +++.+.+..... .+....+.+.+++++.++.+.|+-
T Consensus 270 ~f~~~~~~v-~PDi~---~~gK~lg-gG~~P~~av--~~~-~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~ 341 (460)
T PRK06105 270 MFGCETFGI-KPDIL---VMSKQLS-SSYQPLSAV--LMN-EKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAI 341 (460)
T ss_pred hhhHHhcCC-CCCee---eeecccc-cCcccceEE--EEc-HHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHH
Confidence 334333221 12222 5899998 45 688998 455 443333221100 011223457788888888777753
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEe--c-C------CC-----HHHHHHhHhhcc
Q 015435 308 STMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTF--T-G------LN-----SEQVAFMTKEYH 373 (407)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~--~-~------~~-----~~~~~~~l~~~g 373 (407)
.. + ++..++.+++.++|.+.|+++.....+..+...|.++.+ . + .+ ...+...+.++|
T Consensus 342 i~------~--~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~G 413 (460)
T PRK06105 342 IE------E--RDLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHG 413 (460)
T ss_pred HH------h--ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCC
Confidence 21 1 245567777777887777766210011222333433321 1 1 00 123444556689
Q ss_pred EEEcCCC---eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 374 IYMTSDG---RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 374 i~~~~gg---Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
+.+.+.| |++..- ++++|++++++++.++++++
T Consensus 414 vl~~~~g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 450 (460)
T PRK06105 414 VISRAMGDTLAFCPPLIITAAQVDEMVDRFGRALDDV 450 (460)
T ss_pred eEEEecCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 9998866 776543 58899999999999998754
No 282
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=1.1e-16 Score=153.32 Aligned_cols=155 Identities=15% Similarity=0.145 Sum_probs=120.2
Q ss_pred CcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHH----HHhhcCceee
Q 015435 76 GLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPK----VFTLAGLSVK 151 (407)
Q Consensus 76 g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~----~~~~~G~~~~ 151 (407)
....|.+.++++. +. +..++ +++|++|+.+++ ...+.+||+|+++.+.|.+... .+...|++++
T Consensus 64 ~~~~le~~lA~l~-g~-------~~al~--~~SG~~Ai~~al--~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~ 131 (427)
T PRK05994 64 TNAVLEERVAALE-GG-------TAALA--VASGHAAQFLVF--HTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVR 131 (427)
T ss_pred cHHHHHHHHHHHh-CC-------CcEEE--EcCHHHHHHHHH--HHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEE
Confidence 3677888899887 43 45777 999999999884 4458899999999999986544 3567899988
Q ss_pred EEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCch
Q 015435 152 TYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDAD 231 (407)
Q Consensus 152 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~ 231 (407)
.++. .|++++++++. ++++++++ ++|+||||.+.+ +++|+++|+++|+++|+|++++..... .
T Consensus 132 ~vd~-------~d~~~l~~ai~--~~tklV~v-esp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~~----~ 194 (427)
T PRK05994 132 WADA-------DDPASFERAIT--PRTKAIFI-ESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYLI----R 194 (427)
T ss_pred EECC-------CCHHHHHHhcC--cCCeEEEE-ECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCccccccC----C
Confidence 8854 27889999887 56788777 899999999875 788888899999999999998632211 0
Q ss_pred hHHHHHHHHcCCcEEEEEecCccccccCCCcceeE
Q 015435 232 AQSVRMFVADGGECLVAQSYAKNMGLYGERVGALS 266 (407)
Q Consensus 232 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 266 (407)
+ + . ....+++.|++|.++.+|-.+|.++
T Consensus 195 --p---l-~-~gaDivv~S~tK~lgg~~~~~gG~v 222 (427)
T PRK05994 195 --P---I-E-HGADIVVHSLTKFLGGHGNSMGGII 222 (427)
T ss_pred --c---c-c-cCCcEEEEcCccccCCCCCcEEEEE
Confidence 1 1 1 2345888999999998787778763
No 283
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.79 E-value=3.2e-17 Score=156.70 Aligned_cols=339 Identities=15% Similarity=0.132 Sum_probs=198.7
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC 106 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t 106 (407)
...++++||+..|....+.| ..++.+++++.+++. ......+ +.....++.+.+++.+ .. ..+.+.+ +
T Consensus 49 D~dG~~yiD~~~g~~~~~lG-h~~p~v~~ai~~q~~--~~~~~~~-~~~~~~~la~~L~~~~-~~-----~~~~v~f--~ 116 (433)
T PRK00615 49 DSLGKTFIDFCGSWGSLIHG-HSHPKICDAIQQGAE--RGTSYGL-TSEQEILFAEELFSYL-GL-----EDHKIRF--V 116 (433)
T ss_pred ECCCCEEEEcccchhccccC-CCCHHHHHHHHHHHH--hCCCCCC-CCHHHHHHHHHHHHhC-CC-----CcCEEEE--e
Confidence 34678999999886655567 667788888888876 2222222 2233445556666554 21 1258999 9
Q ss_pred CCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHH-H---hhcCce---e-eEE--EeecCCC---CCcChhhHHHHHH
Q 015435 107 LSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKV-F---TLAGLS---V-KTY--RYYDPAT---RGLNFQGLLEDLR 173 (407)
Q Consensus 107 ~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~-~---~~~G~~---~-~~v--~~~~~~~---~~~d~~~l~~~i~ 173 (407)
++|++|++.++++.+......+|+...-+|+++.+. + ...+.. . ..+ +...+.. .--|++.+++.+.
T Consensus 117 ~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 196 (433)
T PRK00615 117 SSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMN 196 (433)
T ss_pred CchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHH
Confidence 999999999998887665456788888888886532 1 111100 0 000 0000000 0126788888886
Q ss_pred cCCC-CcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEec
Q 015435 174 AAPS-GAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSY 251 (407)
Q Consensus 174 ~~~~-~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 251 (407)
+... ..++++ -....-.|.. .+++.+++|.++|++||+++|+||++.++ ..+ .......+.- ..+++ ++
T Consensus 197 ~~~~~~aavI~-Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G---~~ga~~~~gv-~PDi~---~~ 267 (433)
T PRK00615 197 SLGHRVAGVIF-EPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVA---QGGAAAIYHV-KPDIT---VY 267 (433)
T ss_pred hcCCceEEEEE-CCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccc---HhHHHHhcCC-CCCeE---EE
Confidence 4333 344444 3333334664 56889999999999999999999999877 332 2222222211 22233 38
Q ss_pred CccccccCCCcceeEEeecChhhHHHHHHHHhhh---hhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHH
Q 015435 252 AKNMGLYGERVGALSIVCKTEDVASRVESQLKLV---IRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISM 328 (407)
Q Consensus 252 sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 328 (407)
+|.+| .|+++|++ +++ ++ +.+.+... ....+.+.+++++.++.+.|+... + +...++++++
T Consensus 268 gK~lg-gG~p~~av--~~~-~~----i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~------~--~~~~~~~~~~ 331 (433)
T PRK00615 268 GKILG-GGLPAAAV--VAH-KS----IMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCR------E--QGFYTQLSTL 331 (433)
T ss_pred ccccc-CCcceeee--eec-HH----HHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHh------c--ccHHHHHHHH
Confidence 99998 67888888 454 44 44433211 112334567777888777775321 1 1234455555
Q ss_pred HHHHHHHHH----hcCCCCCcccccCCceeEEec--C-----C------CHH---HHHHhHhhccEEEcCCC--e--EEe
Q 015435 329 RQQLFDALS----ARGTPGDWSHIIKQIGMFTFT--G-----L------NSE---QVAFMTKEYHIYMTSDG--R--ISM 384 (407)
Q Consensus 329 ~~~l~~~l~----~~~~~~~~~~~~~~~~~~~~~--~-----~------~~~---~~~~~l~~~gi~~~~gg--R--is~ 384 (407)
.+++.+.|+ +.+.+ +.... .|.++.+. . + +.+ .+...+.++||.+.+.. . ++.
T Consensus 332 g~~l~~~l~~~~~~~g~~--v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~ls~ 408 (433)
T PRK00615 332 EQNFLSPIEEMIRSQGFP--VSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPFEASFLSS 408 (433)
T ss_pred HHHHHHHHHHHHHHcCCC--eEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCccccccceec
Confidence 555544444 33422 22222 33333321 1 0 111 24445555899998864 2 566
Q ss_pred cCCCCCChhHHHHHHHHHHHhh
Q 015435 385 AGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 385 ~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
.+ +++|++++++++.++++.+
T Consensus 409 ~h-t~~did~~~~a~~~~~~~~ 429 (433)
T PRK00615 409 AH-SMENLDYAQNVLIDSLEKV 429 (433)
T ss_pred CC-CHHHHHHHHHHHHHHHHHH
Confidence 65 9999999999999998764
No 284
>PRK06917 hypothetical protein; Provisional
Probab=99.79 E-value=5.8e-17 Score=156.08 Aligned_cols=350 Identities=11% Similarity=0.070 Sum_probs=203.9
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccc--cCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVK--EYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
...++++||+..|....+.| ..++++++++.+++. ...... .| ......++.+.+++...+ ..+.+++
T Consensus 27 D~dG~~ylD~~~g~~~~~lG-h~hp~v~~Ai~~ql~-~~~~~~~~~~-~~~~~~~lae~L~~~~p~------~~~~v~f- 96 (447)
T PRK06917 27 DQNGNKYFDGSSGAVTAGIG-HGVKEIADAIKEQAE-EVSFVYRSQF-TSEPAEKLAKKLSDLSPG------DLNWSFF- 96 (447)
T ss_pred eCCCCEEEECchhHHhccCC-CCCHHHHHHHHHHHh-hCcCcccccc-CCHHHHHHHHHHHHhCCC------CCCEEEE-
Confidence 45678999999886645567 667788888888886 211111 12 122234455555554411 1257899
Q ss_pred ecCCcccHHHHHHHHHHhhc-----CC-CeEEecCCCCCChHHHHhh-cCc------------eeeEEEeecCCCC--Cc
Q 015435 105 QCLSGTGSLRVGAEFLARHY-----HQ-LTIYIPQPTWGNHPKVFTL-AGL------------SVKTYRYYDPATR--GL 163 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~-----~g-d~Vi~~~p~y~~~~~~~~~-~G~------------~~~~v~~~~~~~~--~~ 163 (407)
+++|++|++.++++..... .| .+|+...-+|++....... .|. .+..++....... +.
T Consensus 97 -~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 175 (447)
T PRK06917 97 -VNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQK 175 (447)
T ss_pred -eCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCC
Confidence 9999999999988875441 23 5788888888877654332 111 1111221100000 00
Q ss_pred --------ChhhHHHHHHcC--CCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchh
Q 015435 164 --------NFQGLLEDLRAA--PSGAIVLLHACAHNPTGV-DPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADA 232 (407)
Q Consensus 164 --------d~~~l~~~i~~~--~~~~~v~i~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~ 232 (407)
+++.+++.+.+. .+..++++-+-..+..|. ..+++.+++|.++|++||+++|+||+..+|+..+ ..
T Consensus 176 ~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG---~~ 252 (447)
T PRK06917 176 VYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTG---AM 252 (447)
T ss_pred ChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCccc---ch
Confidence 235666667533 234556664333333444 4679999999999999999999999999887654 23
Q ss_pred HHHHHHHHcCCcEEEEEecCccccccCC-CcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhH
Q 015435 233 QSVRMFVADGGECLVAQSYAKNMGLYGE-RVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMY 311 (407)
Q Consensus 233 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~-r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 311 (407)
+....+.- ..++ -+++|.++ .|. ++|.+ ++. +++.+.+...-..+....+.+.+++++.++.+.|+...
T Consensus 253 ~a~~~~gv-~PDi---~~~gK~l~-~G~~Pi~a~--~~~-~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~-- 322 (447)
T PRK06917 253 FAMEHWGV-EPDI---MTLGKGLG-AGYTPIAAT--VVS-DRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYME-- 322 (447)
T ss_pred hhHHhcCC-CCCE---EEeeehhc-cCCcceEEE--EEc-HHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHH--
Confidence 33332221 2233 34799998 675 88988 455 44433322110011122345678888888887776321
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCceeEEe--c-C------CC-----HHHHHHhHhhccEEE
Q 015435 312 KEWTLELKAMADRIISMRQQLFDALSARGTPG-DWSHIIKQIGMFTF--T-G------LN-----SEQVAFMTKEYHIYM 376 (407)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~--~-~------~~-----~~~~~~~l~~~gi~~ 376 (407)
-+.+.++++++.++|.+.|+++.... ....+...|.++.+ . + .. ...+...+.++||.+
T Consensus 323 ------~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~ 396 (447)
T PRK06917 323 ------KHNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLL 396 (447)
T ss_pred ------HCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEE
Confidence 12345666677777777776652110 02222334444332 1 1 11 122334455589999
Q ss_pred cCC--------C---eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 377 TSD--------G---RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 377 ~~g--------g---Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
.+. + |++..- ++++|++.+++++.++++++
T Consensus 397 ~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 438 (447)
T PRK06917 397 YPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEM 438 (447)
T ss_pred EecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 764 2 665442 48899999999999998753
No 285
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.79 E-value=8.4e-17 Score=154.30 Aligned_cols=345 Identities=11% Similarity=0.017 Sum_probs=203.0
Q ss_pred cCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 28 DTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 28 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
..+++++||..|....+.| ..++.+++++.+++.+-......+.......++.+.+++.. ... -+.+++ ++
T Consensus 42 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~-~~~-----~~~v~f--~~ 112 (427)
T TIGR00508 42 DDGRRLIDGMSSWWAAIHG-YNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMT-PNA-----LDCVFL--AD 112 (427)
T ss_pred CCCCEEEEccchHHHhcCC-CCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhC-CCC-----CCEEEE--eC
Confidence 4578999999886544567 66778888888887611111111112233445566666554 211 268999 99
Q ss_pred CcccHHHHHHHHHHhhc-----CC-CeEEecCCCCCChHHHHhhc-Cce-------------eeEEEeecCCCC-----C
Q 015435 108 SGTGSLRVGAEFLARHY-----HQ-LTIYIPQPTWGNHPKVFTLA-GLS-------------VKTYRYYDPATR-----G 162 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~-----~g-d~Vi~~~p~y~~~~~~~~~~-G~~-------------~~~v~~~~~~~~-----~ 162 (407)
+|++|++.++++..... +| .+|+...-+|.+....+... |.. +..++.... .+ .
T Consensus 113 sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~ 191 (427)
T TIGR00508 113 SGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQN-RFDEEWNE 191 (427)
T ss_pred CcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCc-cccchhHH
Confidence 99999999988876542 23 57888888888765433321 210 111111000 01 1
Q ss_pred cChhhHHHHHHcCCCC-cEEEEecCCCCCCCC-CCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHH
Q 015435 163 LNFQGLLEDLRAAPSG-AIVLLHACAHNPTGV-DPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVA 240 (407)
Q Consensus 163 ~d~~~l~~~i~~~~~~-~~v~i~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~ 240 (407)
-|++++++.+.+.+.. .++++-+-.++-.|. .++.+++++|.++|++||+++|+||++.+++..+ ..+....+.-
T Consensus 192 ~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G---~~~~~~~~~v 268 (427)
T TIGR00508 192 EAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTG---KLFACEHAGV 268 (427)
T ss_pred HHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC---ccchhhhcCC
Confidence 1456777777643333 344442211444455 4678999999999999999999999998876654 2222222211
Q ss_pred cCCcEEEEEecCccccccCC-CcceeEEeecChhhHHHHHHHHhhh-----hhcccCCCChhHHHHHHHHhcChhhHHhH
Q 015435 241 DGGECLVAQSYAKNMGLYGE-RVGALSIVCKTEDVASRVESQLKLV-----IRPMYSSPPIHGASIVATILKDSTMYKEW 314 (407)
Q Consensus 241 ~~~~~i~~~s~sK~~~~~G~-r~G~~~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 314 (407)
..+++ .++|.++ .|+ .++.+ +.+ ++ +.+.+... ....++..+++++.++.+.++...
T Consensus 269 -~pDi~---~~gK~l~-gG~~p~~a~--~~~-~~----~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~----- 331 (427)
T TIGR00508 269 -VPDIL---CVGKALT-GGYMTLSAT--VTT-DK----VAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILL----- 331 (427)
T ss_pred -CCCEE---Eechhhh-cCcccceEE--EEc-HH----HHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHH-----
Confidence 22333 3799996 674 67776 344 44 44434321 122233557778888877776321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEec---CCCHHHHHHhHhhccEEEcCCC---eEEecC-C
Q 015435 315 TLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFT---GLNSEQVAFMTKEYHIYMTSDG---RISMAG-L 387 (407)
Q Consensus 315 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gi~~~~gg---Ris~~~-~ 387 (407)
+ +...++++++.++|.+.|++++...........|.++.+. ......+...+.++||.+.+.+ |++..- +
T Consensus 332 -~--~~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gv~~~~~~~~l~~~ppl~~ 408 (427)
T TIGR00508 332 -E--GEWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKPVNVEELQKKFVEQGVWIRPFGKLIYVMPPYII 408 (427)
T ss_pred -h--CCHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCccCHHHHHHHHHHCCeEEEecCCEEEEECCCCC
Confidence 1 1345677778888888887764210111122223333221 1233445555566899998876 666542 4
Q ss_pred CCCChhHHHHHHHHHHHh
Q 015435 388 SSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 388 ~~e~i~~~~~~l~~~l~~ 405 (407)
++++++++++++.+++++
T Consensus 409 t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 409 TTEQLQKLTAALIEALHE 426 (427)
T ss_pred CHHHHHHHHHHHHHHHhc
Confidence 889999999999999865
No 286
>PRK07036 hypothetical protein; Provisional
Probab=99.79 E-value=1.7e-16 Score=153.46 Aligned_cols=349 Identities=11% Similarity=0.095 Sum_probs=202.1
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccC--CCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEY--LPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
...++++||+..|....+.| ..++++++++.+++. .......+ .+.....++.+.+++...+ ..+.+++
T Consensus 47 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~q~~-~~~~~~~~~~~~~~~~~~lae~L~~~~p~------~~~~v~f- 117 (466)
T PRK07036 47 DADGRRYLDGIGGMWCVNVG-YGREEMADAIADQAR-RLPYYTPFGDMTNAPAAELAAKLAELAPG------DLNHVFL- 117 (466)
T ss_pred ECCCCEEEECcccHHhhcCC-CCCHHHHHHHHHHHH-hCcccccccccCCHHHHHHHHHHHHhCCC------CcCEEEE-
Confidence 45678999999887655666 667788888888875 11111111 1222233445555544311 1268999
Q ss_pred ecCCcccHHHHHHHHHHhhc-----C-CCeEEecCCCCCChHHHHhhc-C------------ceeeEEEeecCC--CCCc
Q 015435 105 QCLSGTGSLRVGAEFLARHY-----H-QLTIYIPQPTWGNHPKVFTLA-G------------LSVKTYRYYDPA--TRGL 163 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~-----~-gd~Vi~~~p~y~~~~~~~~~~-G------------~~~~~v~~~~~~--~~~~ 163 (407)
++||++|++.++++.+... . ..+|+...-+|++........ | ..+..++..+.. ..+.
T Consensus 118 -~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 196 (466)
T PRK07036 118 -TTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGM 196 (466)
T ss_pred -eCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCC
Confidence 9999999999998876552 2 257888888888765433221 1 112233321110 0111
Q ss_pred C--------hhhHHHHHHc-C-CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchh
Q 015435 164 N--------FQGLLEDLRA-A-PSGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADA 232 (407)
Q Consensus 164 d--------~~~l~~~i~~-~-~~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~ 232 (407)
. .+.+++.+.. . .+..++++- ..+...|.. .+++.+++|.++|++||+++|+||+..+|+..+ +.
T Consensus 197 ~~~~~~~~~~~~~~~~i~~~~~~~iAavi~E-Pv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~ 272 (466)
T PRK07036 197 SEAAFCDFLVDEFEDKILSLGADNIAAFIAE-PILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLG---HF 272 (466)
T ss_pred ChHHHHHHHHHHHHHHHHHcCCCceEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCc---hh
Confidence 1 2344555542 2 234555553 334444554 788999999999999999999999999997654 22
Q ss_pred HHHHHHHHcCCcEEEEEecCccccccC-CCcceeEEeecChhhHHHHHHH---HhhhhhcccCCCChhHHHHHHHHhcCh
Q 015435 233 QSVRMFVADGGECLVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQ---LKLVIRPMYSSPPIHGASIVATILKDS 308 (407)
Q Consensus 233 ~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~ 308 (407)
+.......-..+++ +++|.++ .| +++|.+ ++. +++.+.+... -..+....+++.+++++.++.+.|+..
T Consensus 273 ~~~~~~~gv~PDiv---t~gK~l~-gG~~Pi~av--~~~-~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i 345 (466)
T PRK07036 273 FASEAVFGIQPDII---TFAKGLT-SGYQPLGAV--IIS-ERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIM 345 (466)
T ss_pred hhhhhhcCCCCCEE---EEccccc-cCccccEEE--EEc-HHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHH
Confidence 33321111122333 4799998 67 589998 455 4444433211 001122235567888888888877632
Q ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCC------------C---HHHHHHhHhhcc
Q 015435 309 TMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL------------N---SEQVAFMTKEYH 373 (407)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~------------~---~~~~~~~l~~~g 373 (407)
. -+.+.++.+++.++|.+.|+.+.....+..+...|.++. +.+ + ...+...+.++|
T Consensus 346 ~--------~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~~-ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 416 (466)
T PRK07036 346 E--------REGLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMAC-VECVADKGSKALLPEDIAIGQRIDRHCQERG 416 (466)
T ss_pred H--------hCCHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeceEEE-EEEccCccccCCCCchhHHHHHHHHHHHHCC
Confidence 1 124556666777777777765421001122233344333 211 1 122334455689
Q ss_pred EEEcCCC---eEEecC-CCCCChhHHHHHHHHHHHh
Q 015435 374 IYMTSDG---RISMAG-LSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 374 i~~~~gg---Ris~~~-~~~e~i~~~~~~l~~~l~~ 405 (407)
|.+.+.| |++... ++++|++++++++.+++++
T Consensus 417 vl~~~~~~~~~l~Ppl~it~~~id~~~~~l~~al~~ 452 (466)
T PRK07036 417 LLVRPLEHLCVLSPPLIITRAQIDEIVAILRAAIEE 452 (466)
T ss_pred cEEeecCCEEEEeCCCcCCHHHHHHHHHHHHHHHHH
Confidence 9998865 666432 4889999999999888864
No 287
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.79 E-value=1.2e-16 Score=154.33 Aligned_cols=346 Identities=14% Similarity=0.110 Sum_probs=203.5
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhcccccccc-CCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKE-YLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
...++++||+..|....+.| ..++.+++++.+++. .....+. +.......++.+.+++...+... ..+.+++
T Consensus 59 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~ql~-~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~---~~~~v~f-- 131 (464)
T PRK06938 59 DVEGRQFIDCLAGAGTLALG-HNHPVVIEAIQQVLA-DELPLHTLDLTTPVKDQFVQDLFASLPEAFA---REAKIQF-- 131 (464)
T ss_pred eCCCCEEEEccCCccccccC-CCCHHHHHHHHHHHH-hhhcccccccCCHHHHHHHHHHHHhCccccc---ccceEEE--
Confidence 45679999999997666677 667788888888875 1111111 11222233445555554411100 0024655
Q ss_pred c-CCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhc-C------------ceeeEEEeecCC--CCC-------
Q 015435 106 C-LSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLA-G------------LSVKTYRYYDPA--TRG------- 162 (407)
Q Consensus 106 t-~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~-G------------~~~~~v~~~~~~--~~~------- 162 (407)
+ ++|++|++.++++.+......+|+...-+|++........ | -++..+|..+.. .++
T Consensus 132 ~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 211 (464)
T PRK06938 132 CGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGV 211 (464)
T ss_pred eCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHH
Confidence 5 7999999999988876655568888888888775433321 1 012333331110 000
Q ss_pred -cChhhHHHHHHcCC----CCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHH
Q 015435 163 -LNFQGLLEDLRAAP----SGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVR 236 (407)
Q Consensus 163 -~d~~~l~~~i~~~~----~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~ 236 (407)
.+++.+++.+.+.. +..++++-+ -+.-.|.+ .+.+.++++.++|++||+++|+||+..+|+..+ ..+...
T Consensus 212 ~~~~~~l~~~i~~~~~~~~~iAAvI~EP-iqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG---~~~a~e 287 (464)
T PRK06938 212 RANLHYLENLLDDPESGVVLPAAVILEV-VQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTG---KMFAFE 287 (464)
T ss_pred HHHHHHHHHHHHhhccCCCceEEEEEcc-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---HHHHHH
Confidence 12566777775321 345555533 23333554 679999999999999999999999999998764 334433
Q ss_pred HHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHH
Q 015435 237 MFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTL 316 (407)
Q Consensus 237 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 316 (407)
.+.- ..++++ ++|.++ .|+++|.+ +.. +++ +.+.......+++.+++++.++.+.|+-..
T Consensus 288 ~~gv-~PDiv~---~gKglg-gG~PlsAv--~~~-----~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~------- 347 (464)
T PRK06938 288 HAGI-IPDVVV---LSKAIG-GSLPLAVV--VYR-----EWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIK------- 347 (464)
T ss_pred hcCC-CCCEEE---eecccc-CCCceEEE--eeh-----hHh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHH-------
Confidence 3321 233443 689998 68999999 455 222 222222223455778888888888776321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC--CCCCcccccCCceeEEe--cCC------------CH---HHHHHhHhhccEEEc
Q 015435 317 ELKAMADRIISMRQQLFDALSARG--TPGDWSHIIKQIGMFTF--TGL------------NS---EQVAFMTKEYHIYMT 377 (407)
Q Consensus 317 ~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~--~~~------------~~---~~~~~~l~~~gi~~~ 377 (407)
-+++.++.+++.++|.+.|+++- .+ .+.-+...|-++.+ ..- +. ..+...+.++|+.+.
T Consensus 348 -~~~l~~~~~~~G~~l~~~L~~l~~~~~-~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~ 425 (464)
T PRK06938 348 -EHRLAEHAAAMGERLREHLRQLQRDYP-QLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILE 425 (464)
T ss_pred -HhHHHHHHHHHHHHHHHHHHHHHHhCC-CeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEe
Confidence 12344566666667777666541 11 01222333433322 110 11 123344456899987
Q ss_pred CCC------eEEec-CCCCCChhHHHHHHHHHHHh
Q 015435 378 SDG------RISMA-GLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 378 ~gg------Ris~~-~~~~e~i~~~~~~l~~~l~~ 405 (407)
++| |+... .++++|++.+++++.+++++
T Consensus 426 ~~g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 460 (464)
T PRK06938 426 LGGRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAA 460 (464)
T ss_pred ecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 643 56433 25889999999999999875
No 288
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.79 E-value=7.8e-17 Score=149.78 Aligned_cols=350 Identities=12% Similarity=0.075 Sum_probs=217.9
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhcccccc--ccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRV--KEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
...++.+||-.+|.++.+-| ...+++.+++.+++. .-... ..+...+ ..+|.+++++... ..+ -++|++
T Consensus 40 d~~G~r~lDg~sg~W~~~~G-h~~~~i~~Ai~~Q~~-~l~~~~~~~~t~~P-a~~LA~~L~~~aP-~~~----l~~vFf- 110 (449)
T COG0161 40 DIDGRRYLDGMSGLWCVNHG-HGRPEIAEAIKKQLD-KLPHVMFGGFTHEP-AIELAEKLAELAP-EGG----LDHVFF- 110 (449)
T ss_pred eCCCCEEEecccHHHHhhcC-cCCHHHHHHHHHHHH-hCCchhhcccCCch-HHHHHHHHHHhCC-CCC----ccEEEE-
Confidence 45689999999999988888 778888888888886 21111 1122222 5667777777662 111 289999
Q ss_pred ecCCcccHHHHHHHHHHhhc-----CCC-eEEecCCCCCChHHHHh-hcC-------------ceeeEEEeecC--CC--
Q 015435 105 QCLSGTGSLRVGAEFLARHY-----HQL-TIYIPQPTWGNHPKVFT-LAG-------------LSVKTYRYYDP--AT-- 160 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~-----~gd-~Vi~~~p~y~~~~~~~~-~~G-------------~~~~~v~~~~~--~~-- 160 (407)
++||++|++.++++..... +.. ++|.-..+|++-.-... ..| ..+..+|.... .+
T Consensus 111 -~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~ 189 (449)
T COG0161 111 -TDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFF 189 (449)
T ss_pred -eCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCC
Confidence 9999999999998876543 223 37777778864322211 111 11222222111 00
Q ss_pred --CC----cChhhHHHHHHcC-CCCcEEEEecCCCCC-CCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCch
Q 015435 161 --RG----LNFQGLLEDLRAA-PSGAIVLLHACAHNP-TGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDAD 231 (407)
Q Consensus 161 --~~----~d~~~l~~~i~~~-~~~~~v~i~~~p~NP-tG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~ 231 (407)
+. -..++|++.+.+. +.+.+.+|.-.-... +|+. +++..|+++.++|++||+++|+||+-.+|+..| .
T Consensus 190 ~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG---~ 266 (449)
T COG0161 190 GEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTG---K 266 (449)
T ss_pred CCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCc---h
Confidence 11 2256777777654 355555553333334 6765 788899999999999999999999999999876 2
Q ss_pred hHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHH-HhhhhhcccCCCChhHHHHHHHHhcChhh
Q 015435 232 AQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQ-LKLVIRPMYSSPPIHGASIVATILKDSTM 310 (407)
Q Consensus 232 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 310 (407)
......+.- ..++++ ++|.++..-+++|.+ ++. +++.+.+.+. ...+....+++.+++++.++++.|+-..
T Consensus 267 ~FA~e~~gi-~PDi~~---~aKGLT~GY~Pl~a~--l~~-~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e- 338 (449)
T COG0161 267 MFACEHAGI-VPDILC---LAKGLTGGYLPLSAV--LTS-DRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILE- 338 (449)
T ss_pred hhhhhhcCC-CCCeee---ecccccccchhhHhH--hhh-HHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHH-
Confidence 333333221 233443 689887555788888 455 5555555443 2333444566888888888877665221
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCcccccCCceeEEecCC----C---------HHHHHHhHhhccEEE
Q 015435 311 YKEWTLELKAMADRIISMRQQLFDALSA-RGTPGDWSHIIKQIGMFTFTGL----N---------SEQVAFMTKEYHIYM 376 (407)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~----~---------~~~~~~~l~~~gi~~ 376 (407)
-+.+.++.++...++.+.|++ +...-.+--+. .-|++.-+.+ . ...+.....++|+.+
T Consensus 339 -------~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR-~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~i 410 (449)
T COG0161 339 -------EEDLLERVAEIGAYLQAGLQAALADHPLVGDVR-GLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLI 410 (449)
T ss_pred -------hcCHHHHHHHHHHHHHHHHHHhcccCCcEEEee-ccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEE
Confidence 234556677788888888876 32100011122 2333333322 2 234556666799999
Q ss_pred cCCC-eEEecC---CCCCChhHHHHHHHHHHHh
Q 015435 377 TSDG-RISMAG---LSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 377 ~~gg-Ris~~~---~~~e~i~~~~~~l~~~l~~ 405 (407)
+|.| -+.++. ++++|++++++++++.+++
T Consensus 411 Rp~g~~i~~~PPliit~~eid~l~~~l~~al~~ 443 (449)
T COG0161 411 RPLGDVIYLMPPLIITREEIDELVDALREALDE 443 (449)
T ss_pred eecCCEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 9998 444432 5889999999999999875
No 289
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.78 E-value=2.1e-16 Score=152.69 Aligned_cols=353 Identities=10% Similarity=0.038 Sum_probs=202.3
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhcccccc--ccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRV--KEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
..+++.+||+..|....+.| ..++++++++.+++. .-... ..+ +..-..++.+.+++......+ .-.-+.+++
T Consensus 60 D~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~-~l~~~~~~~~-~~~~~~~lae~L~~~~p~~~~-~~~~~~v~f- 134 (472)
T PRK08742 60 GHDGRRYLDAVSSWWTNLFG-HAEPRIGAAIAAQAG-ELEQVMLAGF-THEPAVQLAEQLLAIAPRQDG-RAPLSKVFY- 134 (472)
T ss_pred eCCCCEEEEcCccHHhccCC-CCCHHHHHHHHHHHH-hCCCcccccc-CCHHHHHHHHHHHHhCCCccc-CCCCCEEEE-
Confidence 45678999999997655567 567778888877775 11111 112 112234455555554421100 001258999
Q ss_pred ecCCcccHHHHHHHHHHhhc-----C-CCeEEecCCCCCChHHHHhhcCc-------------eeeEEEeecCC--CCCc
Q 015435 105 QCLSGTGSLRVGAEFLARHY-----H-QLTIYIPQPTWGNHPKVFTLAGL-------------SVKTYRYYDPA--TRGL 163 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~-----~-gd~Vi~~~p~y~~~~~~~~~~G~-------------~~~~v~~~~~~--~~~~ 163 (407)
+++|++|++.++++.+.+. + ..+|+...-+|++........+. ++..+|..+.. ..+.
T Consensus 135 -~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~ 213 (472)
T PRK08742 135 -ADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQ 213 (472)
T ss_pred -eCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCC
Confidence 9999999999998887652 2 35788888888877543332211 12223321100 0011
Q ss_pred --------ChhhHHHHHHcCCCC-cEEEEecC-CCCCCCC-CCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchh
Q 015435 164 --------NFQGLLEDLRAAPSG-AIVLLHAC-AHNPTGV-DPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADA 232 (407)
Q Consensus 164 --------d~~~l~~~i~~~~~~-~~v~i~~~-p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~ 232 (407)
+++.+++.+...+.. .++++ -. .+.-.|. ..+++.++++.++|++||+++|+||+..+|+..+ ..
T Consensus 214 ~~~~~~~~~~~~l~~~~~~~~~~iAAvI~-EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG---~~ 289 (472)
T PRK08742 214 SAEDYALQAADALQALFEQSPGEICALIL-EPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTG---TL 289 (472)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCceEEEEE-ccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc---cc
Confidence 246666777533333 44444 32 2455566 4789999999999999999999999999998764 34
Q ss_pred HHHHHHHHcCCcEEEEEecCccccccC-CCcceeEEeecChhhHHHHHHHH--hhhhhcccCCCChhHHHHHHHHhcChh
Q 015435 233 QSVRMFVADGGECLVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQL--KLVIRPMYSSPPIHGASIVATILKDST 309 (407)
Q Consensus 233 ~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~ 309 (407)
+....+. -..++++ ++|.++ .| +++|.+ +++ +++.+.+.... ..+....+++.+++++.++.+.|+-..
T Consensus 290 ~a~e~~g-v~PDiv~---~gKgl~-gG~~Plaav--~~~-~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~ 361 (472)
T PRK08742 290 FACEQAG-VMPDLLC---LSKGLT-GGFLPLSAV--LAT-QQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFA 361 (472)
T ss_pred hHHHhcC-CCCCEEE---Eccccc-CCCCCccee--ecc-HHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHH
Confidence 4443332 1233443 689998 67 489998 454 44433322110 011122345678888888887776321
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCcccccCCceeEEe--cC-C------CH-----HHHHHhHhhccE
Q 015435 310 MYKEWTLELKAMADRIISMRQQLFDALSARG-TPGDWSHIIKQIGMFTF--TG-L------NS-----EQVAFMTKEYHI 374 (407)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~--~~-~------~~-----~~~~~~l~~~gi 374 (407)
+ +.+.++.+++.+++.+.++... .+ .+.-+...|.++.+ .. - .. ..+.+.+.++||
T Consensus 362 ------~--~~l~~~~~~~g~~l~~~~~~~~~~~-~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gl 432 (472)
T PRK08742 362 ------D--DDVIARNQPTAARMTQLAAQIGEHP-HVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGV 432 (472)
T ss_pred ------H--CCHHHHHHHHHHHHHHHHHHHhcCC-CeeeEeccceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCe
Confidence 1 1233444444445544443321 11 12223334444332 11 0 10 123344456899
Q ss_pred EEcCCC---eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 375 YMTSDG---RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 375 ~~~~gg---Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
.+.+.| ||...- +++++++.++++|.++++++
T Consensus 433 l~~~~g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 433 VLRPLGDVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred EEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999876 665432 58899999999999999763
No 290
>PRK07481 hypothetical protein; Provisional
Probab=99.78 E-value=1.4e-16 Score=153.59 Aligned_cols=347 Identities=12% Similarity=0.093 Sum_probs=202.9
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccC--CCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEY--LPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
..+++++||+..|....+.| ..++++++++.+++. .......+ .......++.+.+++.+ +.. ..+.+++
T Consensus 38 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~ql~-~~~~~~~~~~~~~~~~~~lae~L~~~~-~~~----~~~~v~f- 109 (449)
T PRK07481 38 DIDGKKLLDGVGGLWNVNVG-HNREEVKEAIVRQLD-ELEYYSTFDGTTHPRAIELSYELIDMF-APE----GMRRVFF- 109 (449)
T ss_pred eCCCCEEEECchhHHhhcCC-CCCHHHHHHHHHHHH-hccceecccccCCHHHHHHHHHHHHhc-CCC----CCCEEEE-
Confidence 45678999999887655667 667788888888876 11111111 12222344555555543 111 1268999
Q ss_pred ecCCcccHHHHHHHHHHhhc-----CC-CeEEecCCCCCChHHHHhhcC-------------ceeeEEEeecCCC--CC-
Q 015435 105 QCLSGTGSLRVGAEFLARHY-----HQ-LTIYIPQPTWGNHPKVFTLAG-------------LSVKTYRYYDPAT--RG- 162 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~-----~g-d~Vi~~~p~y~~~~~~~~~~G-------------~~~~~v~~~~~~~--~~- 162 (407)
++||++|++.++++.+... +| .+|+...-+|++........+ ..+..++..+... +.
T Consensus 110 -~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 188 (449)
T PRK07481 110 -SSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTE 188 (449)
T ss_pred -cCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCC
Confidence 9999999999998887653 23 468888888887654322211 1122222210000 11
Q ss_pred cChhhH--------HHHHH-cC-CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCch
Q 015435 163 LNFQGL--------LEDLR-AA-PSGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDAD 231 (407)
Q Consensus 163 ~d~~~l--------~~~i~-~~-~~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~ 231 (407)
.|++.+ ++.+. .. .+..++++- ..+.-.|.. ++.+.++++.++|++||+++|+||+..+|+..+ .
T Consensus 189 ~d~~~~~~~~~~~le~~i~~~~~~~iAAviiE-Pvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG---~ 264 (449)
T PRK07481 189 QDPEELARICARLLEREIAFQGPDTIAAFIAE-PVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTG---S 264 (449)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEe-cccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCc---h
Confidence 133333 33332 12 234555553 334444664 678899999999999999999999999997654 2
Q ss_pred hHHHHHHHHcCCcEEEEEecCccccccC-CCcceeEEeecChhhHHHHHHHHhh-------hhhcccCCCChhHHHHHHH
Q 015435 232 AQSVRMFVADGGECLVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQLKL-------VIRPMYSSPPIHGASIVAT 303 (407)
Q Consensus 232 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 303 (407)
.+....+.- ..++++ ++|.++ .| +++|.+ +++ ++ +.+.+.. +....+.+.+++++.++.+
T Consensus 265 ~~a~~~~gv-~PDiv~---~gKgl~-gG~~Pi~av--~~~-~~----i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a 332 (449)
T PRK07481 265 WFGSRGWGV-KPDIMC---LAKGIT-SGYVPLGAT--MVN-AR----IADAFEANADFGGAIMHGYTYSGHPVACAAALA 332 (449)
T ss_pred hhHhhhcCC-CCCEEE---Eeeccc-CCCcCceEE--EEc-HH----HHHHHhccCccccccccCCCCCCCHHHHHHHHH
Confidence 333332211 223333 689988 57 589998 565 33 4443321 1122345678888888887
Q ss_pred HhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCceeEEe--c-CC------C--H---HHHHHh
Q 015435 304 ILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPG-DWSHIIKQIGMFTF--T-GL------N--S---EQVAFM 368 (407)
Q Consensus 304 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~--~-~~------~--~---~~~~~~ 368 (407)
.|+-.. -+...++.+++.+++.+.|+++-... .+..+...|.++.+ . +- + . ..+...
T Consensus 333 ~L~~l~--------~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~ 404 (449)
T PRK07481 333 TLDIVV--------REDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADV 404 (449)
T ss_pred HHHHHH--------hhhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHH
Confidence 776321 12344566666777777776642100 01222333443322 1 10 1 1 223344
Q ss_pred HhhccEEEcCCC---eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 369 TKEYHIYMTSDG---RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 369 l~~~gi~~~~gg---Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
+.++|+.+.+.| ||+... ++++|++.+++++.++++++
T Consensus 405 ~~~~Gvl~~~~g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 405 ARENGVLVRPSGTKIILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred HHhCCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 556899998876 776442 48899999999999999764
No 291
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=1.6e-16 Score=151.95 Aligned_cols=155 Identities=17% Similarity=0.188 Sum_probs=121.9
Q ss_pred CcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHH----hhcCceee
Q 015435 76 GLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVF----TLAGLSVK 151 (407)
Q Consensus 76 g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~----~~~G~~~~ 151 (407)
...++++.++++. +. +..++ |+|||+|+.+++ ...+.+||+|+++...|......+ ...|++++
T Consensus 65 ~~~~le~~lA~l~-g~-------~~av~--~sSGt~Al~~al--~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~ 132 (433)
T PRK08134 65 TVAVLEERVAALE-GG-------VGAIA--TASGQAALHLAI--ATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETT 132 (433)
T ss_pred HHHHHHHHHHHHh-CC-------CcEEE--eCCHHHHHHHHH--HHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEE
Confidence 4788899999988 43 45788 999999999984 444789999999999998765544 45899998
Q ss_pred EEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCch
Q 015435 152 TYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDAD 231 (407)
Q Consensus 152 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~ 231 (407)
.++.. |++++++.++ +++++|++ .+|+||||.+.+ +++|+++|+++|+++|+|.++...... .
T Consensus 133 ~vd~~-------d~~~l~~~i~--~~TklV~~-e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~~----~ 195 (433)
T PRK08134 133 FVKPG-------DIDGWRAAIR--PNTRLLFG-ETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYLL----R 195 (433)
T ss_pred EECCC-------CHHHHHHhcC--CCCeEEEE-ECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCcccccC----C
Confidence 88651 7899999998 67888877 789999999764 888888899999999999997533321 0
Q ss_pred hHHHHHHHHcCCcEEEEEecCccccccCCCcceeE
Q 015435 232 AQSVRMFVADGGECLVAQSYAKNMGLYGERVGALS 266 (407)
Q Consensus 232 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 266 (407)
+ + .....+++.|.+|.++.+|..+|.++
T Consensus 196 --p---l--~~GaD~vv~S~tK~l~g~g~~~gG~v 223 (433)
T PRK08134 196 --P---F--EHGADLVYHSATKFLGGHGTAIGGVL 223 (433)
T ss_pred --c---h--hcCCCEEEeccccccCCCCCceEEEE
Confidence 1 1 12346889999999998887787773
No 292
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.78 E-value=1.8e-16 Score=148.23 Aligned_cols=302 Identities=13% Similarity=0.107 Sum_probs=188.9
Q ss_pred cCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCC-ChHHHHhhcCc
Q 015435 70 EYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWG-NHPKVFTLAGL 148 (407)
Q Consensus 70 ~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~-~~~~~~~~~G~ 148 (407)
.|.......+|.+++++++ +. ++++. |++||.|+.++. ...+++||.| +.++|. .....++..|+
T Consensus 66 ~yag~~s~~~lE~~va~~~-G~-------~~av~--v~sGT~Al~ll~--~l~l~pGDeV--psn~~f~Tt~ahIe~~Ga 131 (450)
T TIGR02618 66 AYAGSRNFYHLERTVRELY-GF-------KYVVP--THQGRGAENLLS--QIAIKPGDYV--PGNMYFTTTRYHQEKNGA 131 (450)
T ss_pred hhcCCCcHHHHHHHHHHHH-CC-------CeEEE--cCCHHHHHHHHH--HhCCCCcCEE--CCceeHHHHHHHHHhCCe
Confidence 4888888999999999988 65 68988 999999999873 4447799977 667664 44445788998
Q ss_pred eeeEEEee--------cCCCCCcChhhHHHHHHcC--CCCcEEEEecCCCC-CCCCCCCHHHHHHHHHHHHHcCceeeec
Q 015435 149 SVKTYRYY--------DPATRGLNFQGLLEDLRAA--PSGAIVLLHACAHN-PTGVDPTLEQWEQIRQLMRSKGLLPFFD 217 (407)
Q Consensus 149 ~~~~v~~~--------~~~~~~~d~~~l~~~i~~~--~~~~~v~i~~~p~N-PtG~~~~~~~l~~i~~~~~~~~~~li~D 217 (407)
.++.++.+ ++..+.+|++++++.+++. ++.+++.+ .+++| ..|.++|.++++++.++|++||+.||+|
T Consensus 132 v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~-e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~D 210 (450)
T TIGR02618 132 TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICL-AVTVNLAGGQPVSMANMREVRELCEAHGIKVFYD 210 (450)
T ss_pred EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEE-EEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEE
Confidence 77666442 2445788999999999842 13445556 44556 5689999999999999999999999999
Q ss_pred ccccc-ccCC----CCCchhHHH----HHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhc
Q 015435 218 SAYQG-FASG----SLDADAQSV----RMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRP 288 (407)
Q Consensus 218 ~~y~~-~~~~----~~~~~~~~~----~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~ 288 (407)
.+... -.+- .......++ ..+....| .+..|..|..+.+ +|.++ +++|+++.+++.......-..
T Consensus 211 aAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD--~~~~S~~Kd~~~~---~GG~l-~~~d~~l~~k~r~~~~~~eG~ 284 (450)
T TIGR02618 211 ATRCVENAYFIKEREQGYEDKSIAEILKEMMSYAD--GCTMSGKKDCLVN---IGGFL-CMNDDEMFQSAKELVVVFEGM 284 (450)
T ss_pred ccchhhChhhhhcccccccCCCHHHHHHHHhccCc--EEEEeeccCCCCC---CceEE-EeCCHHHHHHHHHHhhhcCCc
Confidence 99643 1110 000011122 22222233 3778888886544 44442 458887777655532222110
Q ss_pred ccC-CCChhHHHHHHHHhcChhhHHhHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCC------
Q 015435 289 MYS-SPPIHGASIVATILKDSTMYKEWTLELK-AMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL------ 360 (407)
Q Consensus 289 ~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~------ 360 (407)
... ....-.+.+++..|... .+ ...++-..+.++|.+.|.+.| +.+..|.+|--++++.
T Consensus 285 ~tyGgla~r~~~ala~gL~e~---------~~~~y~~~r~~~a~~La~~L~~~G----vpv~~p~ggh~V~vda~~~lph 351 (450)
T TIGR02618 285 PSYGGLAGRDMEAMAIGIREA---------VDYEYIEHRVKQVRYLGDKLKAAG----VPIVEPVGGHAVFLDARRFLPH 351 (450)
T ss_pred cccCchhhhhHHHHHHHHHHh---------hhHHHHHHHHHHHHHHHHHHHHCC----CcccCCCCcceEEEEhHHhCCC
Confidence 011 11222223333233321 11 222333346788999999888 5555666665565522
Q ss_pred ------CHH-HHHHhHhhccEEEcCC-----------C----------eEEecC--CCCCChhHHHHHHHHHHHh
Q 015435 361 ------NSE-QVAFMTKEYHIYMTSD-----------G----------RISMAG--LSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 361 ------~~~-~~~~~l~~~gi~~~~g-----------g----------Ris~~~--~~~e~i~~~~~~l~~~l~~ 405 (407)
... .+.++-.+.||...-- | |+++.. .|.+.++...++|..+.++
T Consensus 352 ~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 352 IPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKH 426 (450)
T ss_pred CChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 222 2345545567744221 1 887764 3668899999999888754
No 293
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.78 E-value=1.7e-16 Score=152.00 Aligned_cols=341 Identities=16% Similarity=0.141 Sum_probs=192.8
Q ss_pred CCCchhhhhHhhhhcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCC----CCCcHHHHH----HHH
Q 015435 14 PEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLP----IVGLVDFNK----LSA 85 (407)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~----~~g~~~l~~----~~a 85 (407)
....|++..+.-... ..+.|+|-.+. | ..++.+.++....+.+.......++. ...+.++.+ .++
T Consensus 12 ~~~~~~~~~~~~~~~-~~~~~~l~~se----n--~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la 84 (416)
T PRK13034 12 YDDEVFAAINKELER-QQDHLELIASE----N--FTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAK 84 (416)
T ss_pred hCHHHHHHHHHHHHH-HhcCeeecccc----c--CCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHH
Confidence 334556665422211 24666766443 2 44556666665554211111111111 233556666 788
Q ss_pred HHHhCCCCCCCCCCce-EEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCCh-HHHHhh--cCcee--eEEEeecCC
Q 015435 86 KLILGADSPAIKDNRV-TTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNH-PKVFTL--AGLSV--KTYRYYDPA 159 (407)
Q Consensus 86 ~~~~~~~~~~~~~~~i-~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~-~~~~~~--~G~~~--~~v~~~~~~ 159 (407)
+++ +. +.. ++ ++||+.|+..++ ...+.+||+|+++..+|.+. ...++. .+... +.++. ++.
T Consensus 85 ~l~-g~-------~~alv~--~~SG~~A~~~~l--~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~ 151 (416)
T PRK13034 85 QLF-GC-------DYANVQ--PHSGSQANGAVY--LALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGV-DRL 151 (416)
T ss_pred HHh-CC-------CceEEe--cCCcHHHHHHHH--HHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEccc-ccc
Confidence 877 53 344 44 689999999984 55588999999999988763 222221 12222 24444 234
Q ss_pred CCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHH
Q 015435 160 TRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFV 239 (407)
Q Consensus 160 ~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~ 239 (407)
++.+|++++++.+.. .++++|++ ..+. +|. ..++.+|.++|++||++||+|++++....... . . ..
T Consensus 152 ~~~~d~~~le~~l~~-~~~klVi~-~~~~--~g~---~~dl~~l~~la~~~g~~livD~Aha~G~~~~g---~-~---~~ 217 (416)
T PRK13034 152 TGLIDYDEVEELAKE-HKPKLIIA-GFSA--YPR---ELDFARFREIADEVGALLMVDMAHIAGLVAAG---E-H---PN 217 (416)
T ss_pred cCCcCHHHHHHHHhh-cCCeEEEE-CCCc--ccc---ccCHHHHHHHHHHcCCEEEEeCcccccCcccC---C-C---CC
Confidence 567899999998863 23455544 3433 455 44788888889999999999999764443210 0 0 01
Q ss_pred HcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcc-cCCCChhHHHHHHHHhcChhhHHhHHHHH
Q 015435 240 ADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPM-YSSPPIHGASIVATILKDSTMYKEWTLEL 318 (407)
Q Consensus 240 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 318 (407)
......++++|++|.++.+ .-|++ ++.+++..++ ++...... ..++.+....++...+... .....
T Consensus 218 ~~~~~Di~~~s~~K~l~g~--~GG~v--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~aa~~~al~~~-----~~~~~ 284 (416)
T PRK13034 218 PFPHAHVVTTTTHKTLRGP--RGGMI--LTNDEEIAKK----INSAVFPGLQGGPLMHVIAAKAVAFGEA-----LQPEF 284 (416)
T ss_pred CCCCceEEEEeCcccCCCC--CCeEE--EECcHHHHHH----HHhhcCCcccCCccHHHHHHHHHHHHHH-----hChhH
Confidence 1123568899999998423 23666 4655443332 22222111 1122222222222112111 00123
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCccccc--CCceeEEe-c---CCCHHHHHHhHhhccEEEcC----C---------
Q 015435 319 KAMADRIISMRQQLFDALSARGTPGDWSHII--KQIGMFTF-T---GLNSEQVAFMTKEYHIYMTS----D--------- 379 (407)
Q Consensus 319 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~--~~~~~~~~-~---~~~~~~~~~~l~~~gi~~~~----g--------- 379 (407)
.+.++++.++.++|.+.|.+.| +.... +......+ + +.+...+.+.|++.||.+.+ +
T Consensus 285 ~~~~~~l~~~a~~l~~~L~~~G----~~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~ 360 (416)
T PRK13034 285 KTYAKQVIANAQALAEVLKERG----YDLVSGGTDNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTS 360 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC----CEeccCCCCCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCC
Confidence 3567889999999999998887 44432 22222222 2 22556666777888998864 1
Q ss_pred C-eEEec-----CCCCCChhHHHHHHHHHHHh
Q 015435 380 G-RISMA-----GLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 380 g-Ris~~-----~~~~e~i~~~~~~l~~~l~~ 405 (407)
+ |+++. +++++|++++++.|++++.+
T Consensus 361 ~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 361 GIRIGTPAGTTRGFGEAEFREIANWILDVLDD 392 (416)
T ss_pred eeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence 2 77643 24679999999999988763
No 294
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=2.8e-16 Score=150.06 Aligned_cols=285 Identities=15% Similarity=0.137 Sum_probs=179.3
Q ss_pred CCC--CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHH----Hh
Q 015435 71 YLP--IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKV----FT 144 (407)
Q Consensus 71 y~~--~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~----~~ 144 (407)
|+. ......|++.++++. +. +..++ +++|+.|+.+++ ...+.+||+|+++...|.+.... +.
T Consensus 63 Ysr~~~p~~~~Le~~lA~l~-g~-------~~av~--~sSG~aAi~~al--~all~~Gd~Vv~~~~~y~~t~~~~~~~l~ 130 (436)
T PRK07812 63 YTRIMNPTQDVVEQRIAALE-GG-------VAALL--LASGQAAETFAI--LNLAGAGDHIVSSPRLYGGTYNLFHYTLP 130 (436)
T ss_pred ccCCCCchHHHHHHHHHHHh-CC-------CeEEE--EccHHHHHHHHH--HHHhCCCCEEEEeCCcchHHHHHHHHHhh
Confidence 554 234678888888877 43 55777 889999999884 55688999999999888776543 34
Q ss_pred hcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeecccccccc
Q 015435 145 LAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFA 224 (407)
Q Consensus 145 ~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~ 224 (407)
..|++++.++ +. .|+++++++++ +++++|++ .+|+||+|.+. ++++|+++|+++|+++|+|+++....
T Consensus 131 ~~Gi~v~~vd--d~----~d~e~l~~ai~--~~tklV~i-e~~sNp~G~v~---Dl~~I~~la~~~gi~liVD~t~a~~~ 198 (436)
T PRK07812 131 KLGIEVSFVE--DP----DDLDAWRAAVR--PNTKAFFA-ETISNPQIDVL---DIPGVAEVAHEAGVPLIVDNTIATPY 198 (436)
T ss_pred cCeEEEEEEC--CC----CCHHHHHHhCC--CCCeEEEE-ECCCCCCCeec---CHHHHHHHHHHcCCEEEEECCCcccc
Confidence 5788877774 12 38899999887 66777777 89999999966 47888888999999999999875322
Q ss_pred CCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhh--------------------------HHHH
Q 015435 225 SGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDV--------------------------ASRV 278 (407)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~--------------------------~~~~ 278 (407)
.. . + + . ....+++.|++|.++..|--+|+++ +.+..+ .+.+
T Consensus 199 ~~----~--p---l-~-~GaDivv~S~tK~lgg~G~~i~G~v--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (436)
T PRK07812 199 LI----R--P---L-E-HGADIVVHSATKYLGGHGTAIAGVI--VDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAY 265 (436)
T ss_pred cC----C--c---h-h-cCCCEEEEecccccCCCCCeEEEEE--EcCCccccccccccccccCCcccccchhhhcchhHH
Confidence 11 0 1 1 1 2334667999999988877777773 432210 0000
Q ss_pred H-HHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CC-----Ccc
Q 015435 279 E-SQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGT------PG-----DWS 346 (407)
Q Consensus 279 ~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~-----~~~ 346 (407)
. +......+......++.....+..-++ .+..+.++..++...+.+.|++.+. |. .+.
T Consensus 266 ~~~~~~~~~~~~G~~l~p~~a~l~~rgl~----------tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~ 335 (436)
T PRK07812 266 ALKARVQLLRDLGSAISPFNAFLIAQGLE----------TLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYE 335 (436)
T ss_pred HHHHHHHHHHhcCCCCCHHHHHHHhcCcC----------cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHH
Confidence 0 111111122222344443443333333 3556667778888899999987642 10 000
Q ss_pred c----c-cCCceeEEec-CCCHHHHHHhHhhccEEEc-C--C-------------------------C------eEEecC
Q 015435 347 H----I-IKQIGMFTFT-GLNSEQVAFMTKEYHIYMT-S--D-------------------------G------RISMAG 386 (407)
Q Consensus 347 ~----~-~~~~~~~~~~-~~~~~~~~~~l~~~gi~~~-~--g-------------------------g------Ris~~~ 386 (407)
. . ...||++.|. .-+.+.+.+++++-.+.-. + | | |||++-
T Consensus 336 ~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSvGl 415 (436)
T PRK07812 336 RAKRLAPKGTGAVLSFELAGGVEAGKAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAVGI 415 (436)
T ss_pred HHHHhCcCCCceEEEEEecCCHHHHHHHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecc
Confidence 0 0 1235666654 2234445555554333221 1 1 1 888873
Q ss_pred CCCCChhHHHHHHHHHHHh
Q 015435 387 LSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 387 ~~~e~i~~~~~~l~~~l~~ 405 (407)
|+.+.+++-|.++|+.
T Consensus 416 ---Ed~~dli~dl~~Al~~ 431 (436)
T PRK07812 416 ---EGIDDILADLEAGFAA 431 (436)
T ss_pred ---CCHHHHHHHHHHHHHh
Confidence 8899999999998875
No 295
>PRK07480 putative aminotransferase; Validated
Probab=99.77 E-value=1.3e-16 Score=153.98 Aligned_cols=350 Identities=13% Similarity=0.050 Sum_probs=200.0
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccC--CCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEY--LPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
...++++||+..|....+.| ...+.+++++.+++. .......+ .......++.+++++.. .. ..+.+++
T Consensus 46 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~q~~-~~~~~~~~~~~~~~~~~~lae~L~~~~-p~-----~~~~v~f- 116 (456)
T PRK07480 46 DSEGNKILDGMAGLWCVNVG-YGRKELADAAARQMR-ELPYYNTFFKTTHPPAIELAAKLAEVA-PP-----GFNHVFF- 116 (456)
T ss_pred eCCCCEEEEccchHHHhcCC-CCCHHHHHHHHHHHH-hcCCcccccccCCHHHHHHHHHHHHhC-CC-----CcCEEEE-
Confidence 45678999999886555566 667788888888876 11111111 12233445555565554 21 1268999
Q ss_pred ecCCcccHHHHHHHHHHhhc-----CC-CeEEecCCCCCChHHHHhhc-Cc------------eeeEEEeecCC--CCCc
Q 015435 105 QCLSGTGSLRVGAEFLARHY-----HQ-LTIYIPQPTWGNHPKVFTLA-GL------------SVKTYRYYDPA--TRGL 163 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~-----~g-d~Vi~~~p~y~~~~~~~~~~-G~------------~~~~v~~~~~~--~~~~ 163 (407)
++||++|++.++++.+... +| .+|+...-+|++........ |. .+..++..... ....
T Consensus 117 -~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 195 (456)
T PRK07480 117 -TNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDM 195 (456)
T ss_pred -eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCC
Confidence 9999999999998887652 23 46888888887754322111 11 11112210000 0001
Q ss_pred C--------hhhHHHHHHc-C-CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchh
Q 015435 164 N--------FQGLLEDLRA-A-PSGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADA 232 (407)
Q Consensus 164 d--------~~~l~~~i~~-~-~~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~ 232 (407)
+ ++.+++.+.+ . .+..++++-+ .+.-.|.. .+.+.+++|.++|++||+++|+||++.+|+..+ ..
T Consensus 196 ~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EP-iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~ 271 (456)
T PRK07480 196 TPEEFGLAAARQLEAKILELGADNVAAFIGEP-IQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTG---EW 271 (456)
T ss_pred ChHHHHHHHHHHHHHHHHhcCCCcEEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---ch
Confidence 1 2555555532 2 2344555533 34335664 678889999999999999999999999997654 23
Q ss_pred HHHHHHHHcCCcEEEEEecCccccccCC-CcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhH
Q 015435 233 QSVRMFVADGGECLVAQSYAKNMGLYGE-RVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMY 311 (407)
Q Consensus 233 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~-r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 311 (407)
+....+.- ..+++ +++|.++ .|. ++|.+ ++. +++.+.+...-..+....+++.+++++.++.+.|+-..
T Consensus 272 ~a~~~~gv-~PDiv---~~gK~l~-gG~~Pi~av--~~~-~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~-- 341 (456)
T PRK07480 272 FGSQHFGI-KPDLM---TIAKGLT-SGYIPMGAV--GVG-DRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILR-- 341 (456)
T ss_pred hhhhhcCC-CCCee---eeehhhc-cCCccceEE--EEc-HHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHH--
Confidence 33333221 22232 4799998 574 88998 454 44433331100112233456788888988888876321
Q ss_pred HhHHHHHHHHHHHH-HHHHHHHHHHHHhcCCCCCcccccCCceeEEec--CC--------C----HHHHHHhHhhccEEE
Q 015435 312 KEWTLELKAMADRI-ISMRQQLFDALSARGTPGDWSHIIKQIGMFTFT--GL--------N----SEQVAFMTKEYHIYM 376 (407)
Q Consensus 312 ~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~--~~--------~----~~~~~~~l~~~gi~~ 376 (407)
+ +...++. +++.++|.+.|+++.....+..+...|.++.+- .- + ...+...+.++||.+
T Consensus 342 ----~--~~l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~ 415 (456)
T PRK07480 342 ----D--EGIVERVRDDTGPYLQKRLRELADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIM 415 (456)
T ss_pred ----h--CCHHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEE
Confidence 1 1333455 355566666665532100012223334433321 10 1 123444455689999
Q ss_pred cCCC---eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 377 TSDG---RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 377 ~~gg---Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
.+.| ||+... ++++++++++++|.++++++
T Consensus 416 ~~~~~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 449 (456)
T PRK07480 416 RAVGDRMIISPPLVITHAEIDELVEKARKALDAT 449 (456)
T ss_pred eecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 8765 666543 48899999999999988653
No 296
>PRK12403 putative aminotransferase; Provisional
Probab=99.77 E-value=1.9e-16 Score=153.13 Aligned_cols=350 Identities=16% Similarity=0.098 Sum_probs=195.9
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccC--CCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEY--LPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
...++++||+..|....+.| ..++.+++++.+++. .......+ .......++.+++++.+.+. .+.+++
T Consensus 50 D~dG~~ylD~~~g~~~~~lG-h~hp~v~~A~~~q~~-~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f- 120 (460)
T PRK12403 50 DNDGKRYLDGMSGLWCTNLG-YGRKDLAAAAARQME-QLPYYNMFFHTTHPAVIELSELLFSLLPGH------YSHAIY- 120 (460)
T ss_pred eCCCCEEEECchhHHhhcCC-CCCHHHHHHHHHHHH-hCCCeecccccCCHHHHHHHHHHHHhCCCC------cCEEEE-
Confidence 44678999999887656677 567788888888886 11111111 11223445666666655211 168999
Q ss_pred ecCCcccHHHHHHHHHHhhc-----CCCe-EEecCCCCCChHH-HHhhcCce-----------eeEEEeecC--CCCCc-
Q 015435 105 QCLSGTGSLRVGAEFLARHY-----HQLT-IYIPQPTWGNHPK-VFTLAGLS-----------VKTYRYYDP--ATRGL- 163 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~-----~gd~-Vi~~~p~y~~~~~-~~~~~G~~-----------~~~v~~~~~--~~~~~- 163 (407)
+++|++|++.++++.+... +++. |+...-+|++... .+...|.+ +..+|.... ..+..
T Consensus 121 -~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 199 (460)
T PRK12403 121 -TNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELT 199 (460)
T ss_pred -eCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCC
Confidence 9999999999998887651 3344 4455566766533 22222211 222321100 00011
Q ss_pred -------ChhhHHHHHHc-CCC-CcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhH
Q 015435 164 -------NFQGLLEDLRA-APS-GAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQ 233 (407)
Q Consensus 164 -------d~~~l~~~i~~-~~~-~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~ 233 (407)
+.+.+++.+.+ .+. ..++++ -....-.|.+ .+++.+++|.++|++||+++|+||+..+|+..+ ..+
T Consensus 200 ~~~~~~~~~~~le~~~~~~~~~~iaavI~-Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG---~~~ 275 (460)
T PRK12403 200 PAEFGRRAALQLEEKILELGAENVAGFVA-EPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTG---EWF 275 (460)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCceEEEEE-ccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---hhh
Confidence 12456555532 222 344455 3333334654 678899999999999999999999998887664 233
Q ss_pred HHHHHHHcCCcEEEEEecCccccccCC-CcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHH
Q 015435 234 SVRMFVADGGECLVAQSYAKNMGLYGE-RVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYK 312 (407)
Q Consensus 234 ~~~~~~~~~~~~i~~~s~sK~~~~~G~-r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 312 (407)
....+.- ..+++ .++|.++ .|. .+|.+ ++. +++.+.+...-..+....+.+.+++++.++.+.|+-..
T Consensus 276 a~e~~gv-~PDiv---~~gK~lg-gG~~Piga~--v~~-~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~--- 344 (460)
T PRK12403 276 AHEHFGF-EPDTL---SIAKGLT-SGYVPMGGL--VLS-KRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALR--- 344 (460)
T ss_pred hhhhcCC-CCCeE---EEccccc-ccccceEEE--EEC-HHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHH---
Confidence 3333221 22333 3899998 574 89988 565 44333322110111122344678888888888776321
Q ss_pred hHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCC-CcccccCCceeEEe--cC-------CCH--H---HHHHhHhhccEEE
Q 015435 313 EWTLELKAMADRII-SMRQQLFDALSARGTPG-DWSHIIKQIGMFTF--TG-------LNS--E---QVAFMTKEYHIYM 376 (407)
Q Consensus 313 ~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~--~~-------~~~--~---~~~~~l~~~gi~~ 376 (407)
+ +...++++ ++.+++.+.|+++-... .+.-+...|.++.+ .. ... + .+...+.++|+.+
T Consensus 345 ---~--~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~ 419 (460)
T PRK12403 345 ---D--EGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVII 419 (460)
T ss_pred ---h--ccHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEE
Confidence 1 12344553 55666666665431100 02223333433322 11 011 1 1223345589999
Q ss_pred cCCC---eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 377 TSDG---RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 377 ~~gg---Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
.+.+ |++... +++++++++++.+.++++++
T Consensus 420 ~~~~~~~~l~Ppl~it~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 420 RSTLGRMIMAPALVAGRAEIDELVDKTRIAVDRT 453 (460)
T ss_pred EecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 8754 555442 48899999999999998653
No 297
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.77 E-value=2.6e-16 Score=150.96 Aligned_cols=276 Identities=16% Similarity=0.111 Sum_probs=170.8
Q ss_pred CCCceEEeecCCcccHHHHHHHHHHhhcCC---CeEEecCCCCCChHH----HHhhcCcee----eEEEeecCCCCCcCh
Q 015435 97 KDNRVTTVQCLSGTGSLRVGAEFLARHYHQ---LTIYIPQPTWGNHPK----VFTLAGLSV----KTYRYYDPATRGLNF 165 (407)
Q Consensus 97 ~~~~i~~~~t~g~t~a~~~~~~~~~~~~~g---d~Vi~~~p~y~~~~~----~~~~~G~~~----~~v~~~~~~~~~~d~ 165 (407)
++++|++ |+|+|+++..++.. .+.++ +.|++....|+.... .++..|.++ +.++. +..+.+++
T Consensus 85 ~~~~v~~--~~~~t~~l~~~~~~--~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~--~~~g~~~~ 158 (406)
T TIGR01814 85 KEDEVVV--MNTLTINLHLLLAS--FYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP--REEETLRL 158 (406)
T ss_pred CCCcEEE--eCCchHHHHHHHHH--hcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc--CCCCccCH
Confidence 4689999 99999999998433 24443 357887889987433 335668877 34544 33456789
Q ss_pred hhHHHHHHcC-CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCc
Q 015435 166 QGLLEDLRAA-PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGE 244 (407)
Q Consensus 166 ~~l~~~i~~~-~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~ 244 (407)
+++++.+... ++++++++ ++++|.||.+.+ +++|+++|+++|+++++|++.+.... +. .+ ...+.
T Consensus 159 ~~l~~~~~~~~~~t~lv~~-~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~G~~-~i-----d~----~~~gv 224 (406)
T TIGR01814 159 EDILDTIEKNGDDIAVILL-SGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAVGNV-PL-----DL----HDWGV 224 (406)
T ss_pred HHHHHHHHhcCCCeEEEEE-eccccccceecC---HHHHHHHHHHcCCEEEEEcccccCCc-cc-----cc----ccCCC
Confidence 9998887532 45666666 889999999775 88888889999999999998653221 11 11 12245
Q ss_pred EEEEEecCcccc-ccCCCcceeEEeecChhhHHHHHHHHhhh-------------------hhcccCCCChhHHHHHHHH
Q 015435 245 CLVAQSYAKNMG-LYGERVGALSIVCKTEDVASRVESQLKLV-------------------IRPMYSSPPIHGASIVATI 304 (407)
Q Consensus 245 ~i~~~s~sK~~~-~~G~r~G~~~~v~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~ 304 (407)
.+++.|..|.++ .|| |.+. +.++. . ..+...+... .+....+++..+..++..+
T Consensus 225 D~~~~s~hK~l~g~pG---~~l~-v~~~~-~-~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~a 298 (406)
T TIGR01814 225 DFACWCTYKYLNAGPG---AGAF-VHEKH-A-HTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGS 298 (406)
T ss_pred CEEEEcCccccCCCCC---eEEE-Eehhh-h-hhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHH
Confidence 688899999864 344 3331 34421 1 1111100000 0001124555555555555
Q ss_pred hcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCcccccC-----CceeEEe-cCCCHHHHHHhHhhccEEEc
Q 015435 305 LKDSTMYKEWTLELKAMADRIISMRQQLFDALSAR-GTPGDWSHIIK-----QIGMFTF-TGLNSEQVAFMTKEYHIYMT 377 (407)
Q Consensus 305 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~l~~~gi~~~ 377 (407)
++-.. ....++.+++.++..+++.+.+.+. +....+.+..+ .++++.+ .+.+.+.+.+.|.++||.+.
T Consensus 299 l~~~~-----~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~~~~~~~~~~L~~~gi~v~ 373 (406)
T TIGR01814 299 LDIFD-----QAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHPVPGKAVFQALIKRGVIGD 373 (406)
T ss_pred HHHHH-----hcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEecCCHHHHHHHHHHCCEEEe
Confidence 54221 1235677788889999999988764 20001333322 2334332 23456666666677899886
Q ss_pred CC--C--eEEec--CCCCCChhHHHHHHHHHH
Q 015435 378 SD--G--RISMA--GLSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 378 ~g--g--Ris~~--~~~~e~i~~~~~~l~~~l 403 (407)
.. + |||++ ..+++|+++++++|++++
T Consensus 374 ~~~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 374 KREPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred ccCCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 53 2 99984 347799999999998865
No 298
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.77 E-value=1.5e-16 Score=153.57 Aligned_cols=346 Identities=15% Similarity=0.093 Sum_probs=199.3
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhcccccccc-CCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKE-YLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
...++++|||..|....+.| ..++++++++.+++. .....+. +.+.....++.+.+++...+... ...-+++
T Consensus 54 D~dG~~ylD~~~g~~~~~lG-H~~p~v~~Ai~~q~~-~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~---~~~~~f~-- 126 (459)
T PRK06931 54 DVEGNQYLDCLAGAGTLALG-HNHPDVLQSIQDVLT-SGLPLHTLDLTTPLKDAFSEYLLSLLPGQGK---EYCLQFT-- 126 (459)
T ss_pred eCCCCEEEEcccchhhccCC-CCCHHHHHHHHHHHh-hhccccccccCCHHHHHHHHHHHHhCCCccc---cceEEEe--
Confidence 45679999999997655667 667788888888875 1111111 11222233455555554411100 0012355
Q ss_pred cCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcC-------------ceeeEEEeecCCCC--C----cChh
Q 015435 106 CLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAG-------------LSVKTYRYYDPATR--G----LNFQ 166 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G-------------~~~~~v~~~~~~~~--~----~d~~ 166 (407)
++||++|++.++++.+.....++|+...-+|++........+ ..+..+|..+.... + -+.+
T Consensus 127 ~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (459)
T PRK06931 127 GPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVK 206 (459)
T ss_pred CCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHH
Confidence 699999999999888777666689989988988765444221 11223332111000 0 1122
Q ss_pred hH----HHHHHc---C-CCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHH
Q 015435 167 GL----LEDLRA---A-PSGAIVLLHACAHNPTGV-DPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRM 237 (407)
Q Consensus 167 ~l----~~~i~~---~-~~~~~v~i~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~ 237 (407)
.+ ++.+.+ . ++..++++-+-..+ .|. ..+++.++++.++|++||+++|+||+..+|+..+ ..+....
T Consensus 207 ~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~-gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG---~~~a~~~ 282 (459)
T PRK06931 207 ALTYYFENFIEDVESGVRKPAAVILEAIQGE-GGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTG---KMFAFEH 282 (459)
T ss_pred HHHHHHHHHHHhhhcCCCceEEEEEccccCC-CCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCc---hHHHhhh
Confidence 22 223321 1 22455555443333 355 4789999999999999999999999999998654 3344333
Q ss_pred HHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHH
Q 015435 238 FVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLE 317 (407)
Q Consensus 238 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 317 (407)
+.- ..++++ ++|.++ .|+++|.+ +.. ++ + +.+.......+++.+++++.++.+.|+...
T Consensus 283 ~gv-~PDivt---~gK~l~-gG~Pi~av--~~~-~~----~-~~~~~~~~~~T~~gnpla~aaala~L~~l~-------- 341 (459)
T PRK06931 283 AGI-EPDIIV---MSKAVG-GGLPLAVL--GIK-KE----F-DAWQPGGHTGTFRGNQLAMATGLTTLKILK-------- 341 (459)
T ss_pred cCC-CCCEEE---eccccc-CCcceeee--eeH-HH----H-hhccCCCCCCCCCCCHHHHHHHHHHHHHHH--------
Confidence 322 223333 699998 68999987 444 22 2 222222233455788888888888776321
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC--CCCCcccccCCceeEEe--cCC------------CHH---HHHHhHhhccEEEcC
Q 015435 318 LKAMADRIISMRQQLFDALSARG--TPGDWSHIIKQIGMFTF--TGL------------NSE---QVAFMTKEYHIYMTS 378 (407)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~--~~~------------~~~---~~~~~l~~~gi~~~~ 378 (407)
-+...++.+++.++|.+.|+++- .+. +..+...|.++.+ ..- +.+ .+...+.++|+.+.+
T Consensus 342 ~~~l~~~~~~~G~~l~~~L~~l~~~~~~-i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~ 420 (459)
T PRK06931 342 EENLAQNAAERGEWLKAQLAELQKRYPC-IGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLER 420 (459)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHhCCC-eEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEee
Confidence 11344555666666666666541 110 2222333443322 110 111 233444568999976
Q ss_pred CC------eEEecC-CCCCChhHHHHHHHHHHHh
Q 015435 379 DG------RISMAG-LSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 379 gg------Ris~~~-~~~e~i~~~~~~l~~~l~~ 405 (407)
.+ |+..+- +++++++.+++++.+++++
T Consensus 421 ~~~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 454 (459)
T PRK06931 421 GGRNGNVVRLLPPLLITQAECEEFIDRFEQALLA 454 (459)
T ss_pred cCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHH
Confidence 53 554432 5889999999999999875
No 299
>PRK07046 aminotransferase; Validated
Probab=99.77 E-value=2.2e-16 Score=152.07 Aligned_cols=334 Identities=16% Similarity=0.101 Sum_probs=198.7
Q ss_pred cCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 28 DTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 28 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
..++++||+..|......| ..++.+++++.+++. ......+ +.....++.+.+++.. + .+.+.+ ++
T Consensus 72 ~DG~~yiD~~~g~g~~~lG-h~~p~i~~Av~~q~~--~~~~~~~-~~~~~~~lAe~l~~~~-~-------~~~v~F--~n 137 (453)
T PRK07046 72 VDGHRYDDFCLGDTGAMFG-HSPAPVARALAEQAR--RGLTTML-PSEDAAWVGEELARRF-G-------LPYWQV--AT 137 (453)
T ss_pred CCCCEEEEecccccccccC-CCCHHHHHHHHHHHH--hCCCCCC-CCHHHHHHHHHHHHHh-C-------CCEEEE--EC
Confidence 4578999998886544456 667788888888886 2222222 3334455666666654 2 278999 99
Q ss_pred CcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhh--cCcee----------e-----EEEeecCCCCCcChhhHHH
Q 015435 108 SGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTL--AGLSV----------K-----TYRYYDPATRGLNFQGLLE 170 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~--~G~~~----------~-----~v~~~~~~~~~~d~~~l~~ 170 (407)
|||+|.+.++++.+.....++|+...-+|+++.+.... .+.+. . .+.. +. -|++.+++
T Consensus 138 SGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~---nd~~~l~~ 212 (453)
T PRK07046 138 TATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVV--EF---NDLAALEA 212 (453)
T ss_pred CHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEee--CC---CCHHHHHH
Confidence 99999999998888776667899999889887543221 01000 0 0000 11 27888888
Q ss_pred HHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEe
Q 015435 171 DLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQS 250 (407)
Q Consensus 171 ~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 250 (407)
.+.. .+..++++-+-..|..-...+++.++++.++|++||+++|+||+.. |..+ .. ... ..+ .-..+++ +
T Consensus 213 ~l~~-~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g-~G-g~~--~~~-gv~PDi~---t 282 (453)
T PRK07046 213 ALAD-GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSG-PG-GYT--RAH-GLEPDFL---V 282 (453)
T ss_pred HhCC-CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccC-Cc-chh--HHh-CCCccce---e
Confidence 8852 3445555543333332244677899999999999999999999976 4221 10 111 111 1112233 3
Q ss_pred cCccccccCCCcceeEEeecChhhHHHHHHHHh-----hhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHH
Q 015435 251 YAKNMGLYGERVGALSIVCKTEDVASRVESQLK-----LVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRI 325 (407)
Q Consensus 251 ~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 325 (407)
++|.++ .|+++|.+ +.+ +++.+.+..... ......+++.+++++.++.+.|+... -+...+++
T Consensus 283 ~gK~lg-gG~Pi~av--~g~-~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~--------~~~~~~~~ 350 (453)
T PRK07046 283 VGKPIA-GGVPCAVY--GFS-AELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVM--------TEAAYAHM 350 (453)
T ss_pred ehhhhc-CCCcceee--eeh-HHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHh--------cccHHHHH
Confidence 899999 78999988 344 444443321100 11122345678888888887765321 01233445
Q ss_pred HHHHHHHHHHHHh----cCCCCCcccccCCceeEEec--C------------CCHH---HHHHhHhhccEEEcCCC---e
Q 015435 326 ISMRQQLFDALSA----RGTPGDWSHIIKQIGMFTFT--G------------LNSE---QVAFMTKEYHIYMTSDG---R 381 (407)
Q Consensus 326 ~~~~~~l~~~l~~----~~~~~~~~~~~~~~~~~~~~--~------------~~~~---~~~~~l~~~gi~~~~gg---R 381 (407)
+++.++|.+.|++ .+.+ +. +...|.++.+. . .+.+ .+...+.++||.+.+.+ +
T Consensus 351 ~~~g~~l~~~L~~l~~~~~~~--~~-v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~~~~ 427 (453)
T PRK07046 351 LALAARLAAGLRAVIARHGLP--WH-VTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITPFHNMML 427 (453)
T ss_pred HHHHHHHHHHHHHHHHhCCCC--eE-EEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEecccCcEE
Confidence 5555555555554 3321 12 22223333221 1 0122 12333445899998865 6
Q ss_pred EEecCCCCCChhHHHHHHHHHHHhh
Q 015435 382 ISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 382 is~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
++.. ++++|++.+++++.++++++
T Consensus 428 ~~p~-~t~~did~~~~~~~~~l~~~ 451 (453)
T PRK07046 428 VCPA-TTAADVDRLVAAFDACLGEL 451 (453)
T ss_pred EeCC-CCHHHHHHHHHHHHHHHHHH
Confidence 6766 59999999999999998764
No 300
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.77 E-value=7.6e-17 Score=152.90 Aligned_cols=288 Identities=16% Similarity=0.153 Sum_probs=174.9
Q ss_pred cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcC-------------------------------
Q 015435 77 LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH------------------------------- 125 (407)
Q Consensus 77 ~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~------------------------------- 125 (407)
++.+....++.+|+.... | ++..||+.|+..++ ...+.|
T Consensus 96 ie~l~~~ra~~lf~a~~a-----n---vqp~Sg~~An~~v~--~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~ 165 (493)
T PRK13580 96 VEWEAAEHAKELFGAEHA-----Y---VQPHSGADANLVAF--WAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELG 165 (493)
T ss_pred HHHHHHHHHHHHhCCCcc-----c---ccCCCcHHHHHHHH--HHHhcccccCcchhccccccccccchhhhhhhhccCC
Confidence 444444555555564322 2 55778888888884 445654
Q ss_pred CCeEEecCCCCCChHHH-----HhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHH
Q 015435 126 QLTIYIPQPTWGNHPKV-----FTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQW 200 (407)
Q Consensus 126 gd~Vi~~~p~y~~~~~~-----~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l 200 (407)
||+|+..++...++... +.....+.+.++++ +.++.+|++++++.+. +.++.+++ +..+|-++ .. ++
T Consensus 166 gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd-~~~g~iD~d~l~~~~~--~~~plvii-~g~S~~~~-~~---dl 237 (493)
T PRK13580 166 NQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVD-PDTGLLDYDEIAALAR--EFKPLILV-AGYSAYPR-RV---NF 237 (493)
T ss_pred CCEEEeecCCCCCeeecCcccchhhheeeeEecccC-cccCccCHHHHHHHHh--hcCCEEEE-eCccccCC-Cc---CH
Confidence 89999888766554222 12223566777773 4557899999999998 67788777 45555443 33 68
Q ss_pred HHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHH
Q 015435 201 EQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVES 280 (407)
Q Consensus 201 ~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~ 280 (407)
++|+++|+++|+++++|+++......+ +... ..+.......++++|++|++. |-+.|++ +++ ++ +.+
T Consensus 238 ~~i~eia~~~gA~L~VD~AH~~Gligg---~~~~-~~~~~~~~~D~vtgT~hKaL~--GP~GG~I--~~~-~~----l~~ 304 (493)
T PRK13580 238 AKLREIADEVGAVLMVDMAHFAGLVAG---KVFT-GDEDPVPHADIVTTTTHKTLR--GPRGGLV--LAK-KE----YAD 304 (493)
T ss_pred HHHHHHHHHcCCEEEEECchhhceecc---ccch-hhcCCCCCCcEEEeCChhhcc--CCCeEEE--Eec-HH----HHH
Confidence 888888999999999999986544432 1110 001111234588999999873 3344776 454 44 344
Q ss_pred HHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc--CCceeEEec
Q 015435 281 QLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHII--KQIGMFTFT 358 (407)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~--~~~~~~~~~ 358 (407)
.+........+++.++...++...+.... .....+.++++.++.++|.+.|.+.| +.+.. ..+.++ ++
T Consensus 305 ~L~~a~P~i~gg~l~p~iAA~avAl~e~~-----~~ef~~y~~~l~~Na~~La~~L~~~G----~~vv~ggTdshIV-~V 374 (493)
T PRK13580 305 AVDKGCPLVLGGPLPHVMAAKAVALAEAR-----TPEFQKYAQQVVDNARALAEGFLKRG----ARLVTGGTDNHLV-LI 374 (493)
T ss_pred HHhhCCCcccCCCccHHHHHHHHHHHHHh-----CccHHHHHHHHHHHHHHHHHHHHhcC----CCccCCCCCCCEE-EE
Confidence 34322222223443333333332332110 01124567889999999999999998 55432 223333 33
Q ss_pred CC-----CHHHHHHhHhhccEEEcC--------C-----C-eEEecC-----CCCCChhHHHHHHHHHHHh
Q 015435 359 GL-----NSEQVAFMTKEYHIYMTS--------D-----G-RISMAG-----LSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 359 ~~-----~~~~~~~~l~~~gi~~~~--------g-----g-Ris~~~-----~~~e~i~~~~~~l~~~l~~ 405 (407)
.+ +...+.+.|++.||.+.+ + + ||++.. ++++|++++++.|.++++.
T Consensus 375 ~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~ 445 (493)
T PRK13580 375 DVTSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSN 445 (493)
T ss_pred EeCCHHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHh
Confidence 33 233566788889999863 1 2 776442 3578999999999988764
No 301
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.76 E-value=9.6e-17 Score=151.44 Aligned_cols=259 Identities=18% Similarity=0.134 Sum_probs=164.0
Q ss_pred CCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEE
Q 015435 75 VGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYR 154 (407)
Q Consensus 75 ~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~ 154 (407)
.-..+|.+++++++ +. ++++. +++||.|+.+++.. ..+.+||+|++|..+|.....++...|++++.++
T Consensus 25 ~~~~~fE~~~a~~~-g~-------~~~~~--~~sgt~Al~~al~~-l~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~D 93 (363)
T PF01041_consen 25 PYVEEFEKEFAEYF-GV-------KYAVA--VSSGTSALHLALRA-LGLGPGDEVIVPAYTFPATASAILWAGAEPVFVD 93 (363)
T ss_dssp HHHHHHHHHHHHHH-TS-------SEEEE--ESSHHHHHHHHHHH-TTGGTTSEEEEESSS-THHHHHHHHTT-EEEEE-
T ss_pred HHHHHHHHHHHHHh-CC-------CeEEE--eCChhHHHHHHHHh-cCCCcCceEecCCCcchHHHHHHHHhccEEEEEe
Confidence 45788999999999 54 78988 99999999999533 2355899999999999999999999999999999
Q ss_pred eecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccC-CCCCchhH
Q 015435 155 YYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFAS-GSLDADAQ 233 (407)
Q Consensus 155 ~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~-~~~~~~~~ 233 (407)
+ +++++.+|++.+++.++ +++++|++++. -|. +.++.+|.++|+++|++||+|.+.+.... .+
T Consensus 94 i-~~~~~~id~~~~~~~i~--~~t~ai~~~h~----~G~---~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g------ 157 (363)
T PF01041_consen 94 I-DPETLNIDPEALEKAIT--PKTKAILVVHL----FGN---PADMDAIRAIARKHGIPLIEDAAQAFGARYKG------ 157 (363)
T ss_dssp B-ETTTSSB-HHHHHHHHH--TTEEEEEEE-G----GGB------HHHHHHHHHHTT-EEEEE-TTTTT-EETT------
T ss_pred c-cCCcCCcCHHHHHHHhc--cCccEEEEecC----CCC---cccHHHHHHHHHHcCCcEEEccccccCceeCC------
Confidence 9 47889999999999999 67788777533 344 44899999999999999999999764332 11
Q ss_pred HHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhh------c-------ccCCCChhHHHH
Q 015435 234 SVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIR------P-------MYSSPPIHGASI 300 (407)
Q Consensus 234 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~~~~ 300 (407)
......++-.++.+..+|.++ .|. -|++ ++.++++.+++......... . .....+.+....
T Consensus 158 --~~~G~~gd~~~fSf~~~K~i~-~ge-GG~v--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAi 231 (363)
T PF01041_consen 158 --RPVGSFGDIAIFSFHPTKIIT-TGE-GGAV--VTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAI 231 (363)
T ss_dssp --EETTSSSSEEEEESSTTSSS--SSS--EEE--EESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHH
T ss_pred --EeccCCCCceEecCCCCCCCc-CCC-CeeE--EecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHH
Confidence 001222333444444478885 443 3777 78888888776653332221 0 001122222222
Q ss_pred HHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc-c-cCC---ceeEEe---cC----CCHHHHHHh
Q 015435 301 VATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSH-I-IKQ---IGMFTF---TG----LNSEQVAFM 368 (407)
Q Consensus 301 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~-~~~---~~~~~~---~~----~~~~~~~~~ 368 (407)
+...|+ .+++..++-+++.+++.+.|.+.+. +.. . .+. ..++.+ ++ .+.+.+.+.
T Consensus 232 gl~QL~----------~L~~~~~~R~~~a~~y~~~L~~~~~---~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~~~ 298 (363)
T PF01041_consen 232 GLAQLK----------RLDEIIARRRENAQRYREALAGIPG---IKPPPIPDGAERSSYYRFPIRLPDEALADRDELVEA 298 (363)
T ss_dssp HHHHHH----------THHHHHHHHHHHHHHHHHHHTTGTT---EEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHHHH
T ss_pred HHHHHH----------HhhhhHHHHHHHHHHHHHHHhcCCC---cccccccccccccccccccccccccccchHHHHHHH
Confidence 232232 2444455555677788888887753 221 1 111 223222 22 256777777
Q ss_pred HhhccEEEcCC
Q 015435 369 TKEYHIYMTSD 379 (407)
Q Consensus 369 l~~~gi~~~~g 379 (407)
|.+.||.+.+.
T Consensus 299 L~~~GI~~~~~ 309 (363)
T PF01041_consen 299 LRARGIETRPH 309 (363)
T ss_dssp HHHTTBEEBCS
T ss_pred HHHCCCccccc
Confidence 77789988653
No 302
>PRK07483 hypothetical protein; Provisional
Probab=99.76 E-value=3.1e-16 Score=150.82 Aligned_cols=346 Identities=10% Similarity=0.070 Sum_probs=201.1
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccc-cCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVK-EYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
...++.+||+..|....+.| ..++.+++++.+++. .....+ .+.......++.+.+++.. .. ..+.+++
T Consensus 26 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~av~~ql~-~~~~~~~~~~~~~~~~~lae~L~~~~-p~-----~~~~v~f-- 95 (443)
T PRK07483 26 DATGKRYLDASGGAAVSCLG-HSHPRVIAAIHAQID-RLAYAHTSFFTTEPAEALADRLVAAA-PA-----GLEHVYF-- 95 (443)
T ss_pred eCCCCEEEEcCccHhhhccC-CCCHHHHHHHHHHHH-hccCccccccCCHHHHHHHHHHHHhC-CC-----CCCEEEE--
Confidence 45678999999997666677 667788888888886 111011 1111222334455555543 11 1268999
Q ss_pred cCCcccHHHHHHHHHHhhc-----CC-CeEEecCCCCCChHHHHhhc-Cc------------eeeEEEeecCCCCC---c
Q 015435 106 CLSGTGSLRVGAEFLARHY-----HQ-LTIYIPQPTWGNHPKVFTLA-GL------------SVKTYRYYDPATRG---L 163 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~-----~g-d~Vi~~~p~y~~~~~~~~~~-G~------------~~~~v~~~~~~~~~---~ 163 (407)
++||++|++.++++.+.+. +| .+|+...-+|++........ |. .+..++.....+.. .
T Consensus 96 ~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 175 (443)
T PRK07483 96 VSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGE 175 (443)
T ss_pred cCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCC
Confidence 9999999999999887762 33 46888888887765322211 11 11222211000000 0
Q ss_pred --------ChhhHHHHHHc-C-CCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchh
Q 015435 164 --------NFQGLLEDLRA-A-PSGAIVLLHACAHNPTGV-DPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADA 232 (407)
Q Consensus 164 --------d~~~l~~~i~~-~-~~~~~v~i~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~ 232 (407)
.++++++.+.+ . ++..++++-+-..+-.|. ..+++.++++.++|++||+++|+||+..+|+..+ +.
T Consensus 176 ~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG---~~ 252 (443)
T PRK07483 176 SDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTG---TL 252 (443)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCc---HH
Confidence 02456665542 2 233455553322222354 4778899999999999999999999999997654 34
Q ss_pred HHHHHHHHcCCcEEEEEecCccccccCC-CcceeEEeecChhhHHHHHHHHhhh----hhcccCCCChhHHHHHHHHhcC
Q 015435 233 QSVRMFVADGGECLVAQSYAKNMGLYGE-RVGALSIVCKTEDVASRVESQLKLV----IRPMYSSPPIHGASIVATILKD 307 (407)
Q Consensus 233 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~-r~G~~~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~ 307 (407)
+....+.- ..++++ ++|.++ .|+ ++|.+ +++ ++ +.+.+... ....+++.+++++.++.+.|+-
T Consensus 253 ~a~~~~gv-~PDiv~---~gK~l~-gG~~Pi~av--~~~-~~----i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~ 320 (443)
T PRK07483 253 FACEEDGV-APDLVT---IAKGLG-AGYQPIGAV--LAS-DR----IYDAIADGSGFFQHGHTYLGHATACAAALAVQRV 320 (443)
T ss_pred HHHhhcCC-CCCeee---ehhhhc-cCccccEEE--EEc-HH----HHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHH
Confidence 44333322 223333 699998 685 89998 465 33 43333211 1223557788888888877753
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCCcccccCCceeEEec---C------CC-----HHHHHHhHhh
Q 015435 308 STMYKEWTLELKAMADRIISMRQQLFDALSAR--GTPGDWSHIIKQIGMFTFT---G------LN-----SEQVAFMTKE 371 (407)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~---~------~~-----~~~~~~~l~~ 371 (407)
.. -+.+.++.+++.++|.+.|+++ ..+. +.-+...|.++.+- + .+ .+.+...+.+
T Consensus 321 i~--------~~~l~~~~~~~g~~l~~~L~~l~~~~~~-i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (443)
T PRK07483 321 IA--------EDGLLANVRARGEQLRARLRERLGQHPH-VGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMA 391 (443)
T ss_pred HH--------hcCHHHHHHHHHHHHHHHHHHHHhcCCC-eeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHH
Confidence 21 1234566666777777777653 2110 12223334333221 1 01 1234444555
Q ss_pred ccEEEcCC--------C---eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 372 YHIYMTSD--------G---RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 372 ~gi~~~~g--------g---Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
+|+.+.+. | ||...- ++++++++++++|.++++++
T Consensus 392 ~Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~ 438 (443)
T PRK07483 392 RGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAA 438 (443)
T ss_pred CCcEEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 89998653 2 664332 58899999999999998753
No 303
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.76 E-value=7.3e-16 Score=144.72 Aligned_cols=282 Identities=14% Similarity=0.113 Sum_probs=185.1
Q ss_pred cCCC--CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHH----
Q 015435 70 EYLP--IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVF---- 143 (407)
Q Consensus 70 ~y~~--~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~---- 143 (407)
.|+. .+....|.+.++++. +. +..++ ++||+.|+..++ +..+.+||+|++++..|.+....+
T Consensus 55 ~YsR~~nPt~~~le~~la~LE-g~-------~~a~~--~~SGmaAi~~~~--~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l 122 (395)
T PRK08114 55 FYGRRGTLTHFSLQEAMCELE-GG-------AGCAL--YPCGAAAVANAI--LAFVEQGDHVLMTGTAYEPTQDFCSKIL 122 (395)
T ss_pred cccCCCChhHHHHHHHHHHHh-CC-------CeEEE--EhHHHHHHHHHH--HHHcCCCCEEEEeCCCcHHHHHHHHHHH
Confidence 3544 334667778888865 32 57777 999999999884 556889999999998997776654
Q ss_pred hhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC--ceeeeccccc
Q 015435 144 TLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKG--LLPFFDSAYQ 221 (407)
Q Consensus 144 ~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~--~~li~D~~y~ 221 (407)
+..|+++..++. .|.+++++++. +++++|++ .+|.||||.+. |+++|+++|+++| +++++|.+++
T Consensus 123 ~~~Gi~v~~vd~-------~d~~~l~~~l~--~~TrlV~~-EtpsNp~~~v~---DI~~Ia~ia~~~g~g~~lvVDnT~a 189 (395)
T PRK08114 123 SKLGVTTTWFDP-------LIGADIAKLIQ--PNTKVVFL-ESPGSITMEVH---DVPAIVAAVRSVNPDAVIMIDNTWA 189 (395)
T ss_pred HhcCcEEEEECC-------CCHHHHHHhcC--CCceEEEE-ECCCCCCCEee---cHHHHHHHHHHhCCCCEEEEECCCc
Confidence 567999888853 36788999987 67888888 89999999966 5899999999984 9999999985
Q ss_pred cccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHH
Q 015435 222 GFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIV 301 (407)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (407)
....- ++ ......++++|.+|.++.+|.-+|.+ ++.+++..+. +...........++.....+
T Consensus 190 ~p~~~----~p-------l~~GaDivv~S~tKyl~Ghsdv~~G~--v~~~~~~~~~----l~~~~~~~G~~~~p~~a~l~ 252 (395)
T PRK08114 190 AGVLF----KA-------LDFGIDISIQAGTKYLVGHSDAMIGT--AVANARCWEQ----LRENSYLMGQMVDADTAYMT 252 (395)
T ss_pred ccccc----CH-------HHcCCcEEEEcCcccccCCCcceeEE--EEcCHHHHHH----HHHHHHhccCCCCHHHHHHH
Confidence 43221 11 11245799999999988776434334 3555543333 33222223334455555544
Q ss_pred HHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CC-----Cccc----ccCCceeEEec-CC--CHH
Q 015435 302 ATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGT------PG-----DWSH----IIKQIGMFTFT-GL--NSE 363 (407)
Q Consensus 302 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~-----~~~~----~~~~~~~~~~~-~~--~~~ 363 (407)
..-|+. +..+.++..++...+.+.|++.+. |. ..+. ....||++.+. +- +.+
T Consensus 253 ~rgl~T----------L~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~ 322 (395)
T PRK08114 253 SRGLRT----------LGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDE 322 (395)
T ss_pred HcCCCc----------HHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHH
Confidence 444443 445567777888889999987642 11 0000 11246677654 21 344
Q ss_pred HHHHhHhhccEEE------------c------------------CCC--eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 364 QVAFMTKEYHIYM------------T------------------SDG--RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 364 ~~~~~l~~~gi~~------------~------------------~gg--Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
.+.++++...+.. . ++| |+|++- |+.+.+++-|.++|+.+
T Consensus 323 ~~~~f~~~l~l~~~a~SlGg~~SLi~~~~~~~~~~~~~~~~~~~~~~liRlSvGl---Ed~~DLi~Dl~~Al~~~ 394 (395)
T PRK08114 323 QLANYLDNFSLFSMAYSWGGFESLILANQPEEIAAIRPAGEVDFTGTLIRLHIGL---EDVDDLIADLAAGFARI 394 (395)
T ss_pred HHHHHHHhCCcceeecccCCccceeccCCchhhhccCChhHhcCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence 5555555433311 1 113 888773 88999999999998753
No 304
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.76 E-value=6.6e-16 Score=144.71 Aligned_cols=280 Identities=18% Similarity=0.197 Sum_probs=181.6
Q ss_pred cccCCC--CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHh-
Q 015435 68 VKEYLP--IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFT- 144 (407)
Q Consensus 68 ~~~y~~--~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~- 144 (407)
...|+. .+....+.+.++++. +. +.+++ +++|+.|+..+ ++..+.+||.|+++...|.+....++
T Consensus 46 ~~~Y~R~gnPt~~~le~~la~Le-~g-------~~a~~--~~SGmaAi~~~--l~~ll~~Gd~iv~~~~~Y~~t~~~~~~ 113 (386)
T PF01053_consen 46 GYIYSRYGNPTVRALEQRLAALE-GG-------EDALL--FSSGMAAISAA--LLALLKPGDHIVASDDLYGGTYRLLEE 113 (386)
T ss_dssp SCSBTTTC-HHHHHHHHHHHHHH-T--------SEEEE--ESSHHHHHHHH--HHHHS-TTBEEEEESSSSHHHHHHHHH
T ss_pred CcceeccccccHHHHHHHHHHhh-cc-------cceee--ccchHHHHHHH--HHhhcccCCceEecCCccCcchhhhhh
Confidence 355655 233566778888876 32 67888 99999999888 46678899999999999988877666
Q ss_pred ---hcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC-ceeeecccc
Q 015435 145 ---LAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKG-LLPFFDSAY 220 (407)
Q Consensus 145 ---~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~-~~li~D~~y 220 (407)
..|+++..++. -|++++++++. +++++|++ -+|.||+..+ -|+++|+++|+++| +++++|+.+
T Consensus 114 ~l~~~gv~v~~~d~-------~d~~~l~~~l~--~~t~~v~~-EspsNP~l~v---~Dl~~i~~~a~~~g~~~~vVDnT~ 180 (386)
T PF01053_consen 114 LLPRFGVEVTFVDP-------TDLEALEAALR--PNTKLVFL-ESPSNPTLEV---PDLEAIAKLAKEHGDILVVVDNTF 180 (386)
T ss_dssp CHHHTTSEEEEEST-------TSHHHHHHHHC--TTEEEEEE-ESSBTTTTB------HHHHHHHHHHTTT-EEEEECTT
T ss_pred hhcccCcEEEEeCc-------hhHHHHHhhcc--ccceEEEE-EcCCCccccc---ccHHHHHHHHHHhCCceEEeeccc
Confidence 46888877733 48899999998 67888888 8999999774 47999999999998 999999998
Q ss_pred ccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecC-hhhHHHHHHHHhhhhhcccCCCChhHHH
Q 015435 221 QGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKT-EDVASRVESQLKLVIRPMYSSPPIHGAS 299 (407)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (407)
.....-. + + . ....+++.|.+|.++..|--+|.++ ++++ ++..+++ ...........++....
T Consensus 181 atp~~~~----p-----L-~-~GaDivv~S~TKyl~Ghsdv~~G~v-v~~~~~~~~~~l----~~~~~~~G~~~~p~da~ 244 (386)
T PF01053_consen 181 ATPYNQN----P-----L-E-LGADIVVHSATKYLSGHSDVMGGAV-VVNGSSELYDRL----REFRRLLGATLSPFDAW 244 (386)
T ss_dssp THTTTC-----G-----G-G-GT-SEEEEETTTTTTTSSSE-EEEE-EESSHHHHHHHH----HHHHHHHT-B--HHHHH
T ss_pred cceeeec----c-----C-c-CCceEEEeeccccccCCcceeeEEE-EECchhhhhhhh----cchhhhcCccchHHHHH
Confidence 6543321 1 1 1 2346889999999986665555553 4444 3444443 33333333355555555
Q ss_pred HHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-cc-----------------cCCceeEEecCCC
Q 015435 300 IVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWS-HI-----------------IKQIGMFTFTGLN 361 (407)
Q Consensus 300 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~-----------------~~~~~~~~~~~~~ 361 (407)
.+..-++. +..+.++..++...+.+.|++.+. +. +. ...+|++.+.=-+
T Consensus 245 ll~rgl~T----------l~~R~~~~~~nA~~lA~~L~~hp~---V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~ 311 (386)
T PF01053_consen 245 LLLRGLRT----------LPLRMERQNENAEALAEFLEEHPK---VKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKG 311 (386)
T ss_dssp HHHHHHTT----------HHHHHHHHHHHHHHHHHHHHTSTT---EEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESS
T ss_pred HHhcCCCc----------HHHHHHHHHHHHHHHHHHHHhCCC---CCeEEEcccccccceeeeeecccccCceeEEEecc
Confidence 55555543 345556777888899999988752 21 11 1245555544223
Q ss_pred H-HHHHHhHhhccEE-EcC--C-------------------------C------eEEecCCCCCChhHHHHHHHHHHH
Q 015435 362 S-EQVAFMTKEYHIY-MTS--D-------------------------G------RISMAGLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 362 ~-~~~~~~l~~~gi~-~~~--g-------------------------g------Ris~~~~~~e~i~~~~~~l~~~l~ 404 (407)
. +.+..++++.++. ..+ | | |+|++- |+.+.+++.|+++|+
T Consensus 312 ~~~~~~~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl---Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 312 GEEAARRFLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGL---EDPDDLIADLEQALE 386 (386)
T ss_dssp HHHHHHHHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S---S-HHHHHHHHHHHHH
T ss_pred chhhhHhHHhhhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEecc---CCHHHHHHHHHHhcC
Confidence 3 4566666665543 211 1 1 888883 889999999999885
No 305
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.75 E-value=3.6e-15 Score=138.01 Aligned_cols=278 Identities=17% Similarity=0.177 Sum_probs=190.4
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHh----hcCce
Q 015435 74 IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFT----LAGLS 149 (407)
Q Consensus 74 ~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~----~~G~~ 149 (407)
.+....+.++++++- +. ++.+. ++||+.|+..+ ++..+++||.|++++..|.+....+. ..|++
T Consensus 62 nPT~~~lE~~~a~LE-g~-------~~~~a--fsSGmaAI~~~--~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~ 129 (396)
T COG0626 62 NPTRDALEEALAELE-GG-------EDAFA--FSSGMAAISTA--LLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVE 129 (396)
T ss_pred CccHHHHHHHHHHhh-CC-------CcEEE--ecCcHHHHHHH--HHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeE
Confidence 345677788888876 32 67877 99999999998 46778899999999999988766554 67888
Q ss_pred eeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCC
Q 015435 150 VKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLD 229 (407)
Q Consensus 150 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~ 229 (407)
+.+++. -+.+++++++.+ +++++|++ -+|.|||-.+ -|+.+|+++|+++|+++|+|+.|+...+-.
T Consensus 130 ~~~~d~-------~~~~~~~~~~~~-~~tk~v~l-EtPsNP~l~v---~DI~~i~~~A~~~g~~vvVDNTfatP~~q~-- 195 (396)
T COG0626 130 VTFVDP-------GDDEALEAAIKE-PNTKLVFL-ETPSNPLLEV---PDIPAIARLAKAYGALVVVDNTFATPVLQR-- 195 (396)
T ss_pred EEEECC-------CChHHHHHHhcc-cCceEEEE-eCCCCccccc---ccHHHHHHHHHhcCCEEEEECCcccccccC--
Confidence 887743 245566666652 47889888 8999999774 479999999999999999999987655431
Q ss_pred chhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChh
Q 015435 230 ADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDST 309 (407)
Q Consensus 230 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 309 (407)
+. .....|++.|.+|.++..+-=+|.++ +++++++.+.+....+ .......++.....+.+-++.
T Consensus 196 --PL-------~~GaDIVvhSaTKyl~GHsDvl~G~v-~~~~~~~~~~~~~~~~---~~~G~~l~p~dA~l~lRGlkT-- 260 (396)
T COG0626 196 --PL-------ELGADIVVHSATKYLGGHSDVLGGVV-LTPNEELYELLFFAQR---ANTGAVLSPFDAWLLLRGLRT-- 260 (396)
T ss_pred --hh-------hcCCCEEEEeccccccCCcceeeeEE-ecChHHHHHHHHHHHH---hhcCCCCCHHHHHHHHhccch--
Confidence 11 12357999999999987766666642 4565554444322111 112334555555555544443
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-cc-c----------------CCceeEEecCCCHHHHHHhHhh
Q 015435 310 MYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWS-HI-I----------------KQIGMFTFTGLNSEQVAFMTKE 371 (407)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~-~----------------~~~~~~~~~~~~~~~~~~~l~~ 371 (407)
+..+.++..++...+.++|++.+. ++ +. + ..||+|+|.=-+.+.+.++++.
T Consensus 261 --------L~~Rm~~~~~nA~~IA~~L~~~p~---V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~~ 329 (396)
T COG0626 261 --------LALRMERHNENALKIAEFLADHPK---VKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDS 329 (396)
T ss_pred --------HHHHHHHHHHHHHHHHHHHhcCCC---eEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHHh
Confidence 445556777888889999987542 11 11 1 2577777652222666666666
Q ss_pred ccEEEc---CC-------------------------C------eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 372 YHIYMT---SD-------------------------G------RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 372 ~gi~~~---~g-------------------------g------Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
-.++.. =| | |+|++- |+++.+++-|+++++..
T Consensus 330 L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl---Ed~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 330 LKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGL---EDVEDLIADLEQALAKA 395 (396)
T ss_pred CCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecC---CCHHHHHHHHHHHHHhh
Confidence 555441 12 1 888874 89999999999998764
No 306
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=2.6e-15 Score=143.57 Aligned_cols=280 Identities=13% Similarity=0.098 Sum_probs=177.4
Q ss_pred CcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChH----HHHhhcCceee
Q 015435 76 GLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHP----KVFTLAGLSVK 151 (407)
Q Consensus 76 g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~----~~~~~~G~~~~ 151 (407)
....+++.++++. +. ++.++ +++|+.|+.++ +...+.+||+|+++...|.+.. ..+...|++++
T Consensus 70 t~~~le~~la~l~-g~-------~~~v~--fsSG~~Ai~~a--l~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~ 137 (437)
T PRK05613 70 TVEALENRIASLE-GG-------VHAVA--FASGQAAETAA--ILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVT 137 (437)
T ss_pred HHHHHHHHHHHHh-CC-------CeEEE--eCCHHHHHHHH--HHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEE
Confidence 3677888888877 43 34555 66667888876 3455789999999999998774 34467899998
Q ss_pred EEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCch
Q 015435 152 TYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDAD 231 (407)
Q Consensus 152 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~ 231 (407)
.++. + .|+++++++++ ++++++++ .++.||+|.+. ++++|+++|+++|+++|+|.+++....- .
T Consensus 138 ~vd~--~----~d~e~l~~~l~--~~tk~V~~-e~~~Np~~~v~---di~~I~~la~~~gi~livD~t~a~g~~~----~ 201 (437)
T PRK05613 138 FVEN--P----DDPESWQAAVQ--PNTKAFFG-ETFANPQADVL---DIPAVAEVAHRNQVPLIVDNTIATAALV----R 201 (437)
T ss_pred EECC--C----CCHHHHHHhCC--ccCeEEEE-ECCCCCCCccc---CHHHHHHHHHHcCCeEEEECCCcccccc----C
Confidence 8862 2 27899999987 56777776 78999999855 5888888899999999999997432211 1
Q ss_pred hHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhh-------------------------------HHHHH-
Q 015435 232 AQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDV-------------------------------ASRVE- 279 (407)
Q Consensus 232 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~-------------------------------~~~~~- 279 (407)
+. . ....+++.|++|.++..|.-+|.++ +.+.++ ...+.
T Consensus 202 --p~----~-~GaDivv~S~~K~l~G~gd~~gG~v--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (437)
T PRK05613 202 --PL----E-LGADVVVASLTKFYTGNGSGLGGVL--IDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGL 272 (437)
T ss_pred --hH----H-hCCCEEEeeccceecCCCcceeEEE--EecCcccccccccccccCCCCCCCccccccccccccchHHHHH
Confidence 11 1 1347889999999987777677763 422110 00010
Q ss_pred HHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CC-----Ccccc
Q 015435 280 SQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGT------PG-----DWSHI 348 (407)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~-----~~~~~ 348 (407)
+.............++.....+..-|+. +..+.++..++...+.+.|++.+. |. .+...
T Consensus 273 ~~~~~~~~~~G~~~~p~~a~l~~rgl~T----------L~lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~~~p~~~~~ 342 (437)
T PRK05613 273 KARAGLLRDTGATLSPFNAWVTAQGLDT----------LSLRLERHNENAIKVAEFLNNHEKVAKVNFAGLKDSPWYATK 342 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHcccCc----------HHHHHHHHHHHHHHHHHHHHcCCCcceEECCCCCCCccHHHH
Confidence 1111122223334455445544444433 445566777888889999987652 11 00110
Q ss_pred -----cCCceeEEec-CCCHHHHHHhHhhccEEEc-C--C-------------------------C------eEEecCCC
Q 015435 349 -----IKQIGMFTFT-GLNSEQVAFMTKEYHIYMT-S--D-------------------------G------RISMAGLS 388 (407)
Q Consensus 349 -----~~~~~~~~~~-~~~~~~~~~~l~~~gi~~~-~--g-------------------------g------Ris~~~~~ 388 (407)
..-||++.|. +-+.+.+.+++++-.+... + | | |||++-
T Consensus 343 ~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl-- 420 (437)
T PRK05613 343 EKLGLKYTGSVLSFDIKGGKDEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGITQATVRLSVGI-- 420 (437)
T ss_pred HHhcCCCCceEEEEEecCCHHHHHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCCCCeEEEEecc--
Confidence 1125566654 2234555555555444221 1 1 1 888873
Q ss_pred CCChhHHHHHHHHHHHh
Q 015435 389 SKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 389 ~e~i~~~~~~l~~~l~~ 405 (407)
|+.+.+++-|.++|+.
T Consensus 421 -E~~~dLi~Dl~~Al~~ 436 (437)
T PRK05613 421 -EDIDDIIADLEGGFAA 436 (437)
T ss_pred -CCHHHHHHHHHHHHhh
Confidence 8899999999999874
No 307
>PRK06148 hypothetical protein; Provisional
Probab=99.74 E-value=8.9e-16 Score=160.97 Aligned_cols=345 Identities=11% Similarity=0.052 Sum_probs=204.6
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC 106 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t 106 (407)
...++++||+..|. .+.| ..++.+++++.+++. .......| ......++.+++++.+.+ ..+.+.+ +
T Consensus 620 D~dG~~ylD~~~g~--~~lG-H~hp~v~~Ai~~q~~-~l~~~~~~-~~~~~~~lAe~L~~~~p~------~~~~v~f--~ 686 (1013)
T PRK06148 620 DNRGRAYLDCFNNV--CHVG-HAHPRVVAAAARQAA-RLNTNTRY-LHDAIVAYAERLTATLPD------GLTVAFF--V 686 (1013)
T ss_pred ECCCCEEEEcccCh--hhcC-CCCHHHHHHHHHHHh-hcCCcCCc-CCHHHHHHHHHHHHhCCC------CcCEEEE--e
Confidence 35678999999885 2566 667788888888886 11112223 233344556666655411 1257899 9
Q ss_pred CCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhc-C------------ceeeEEEeecCC--CCC-cC------
Q 015435 107 LSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLA-G------------LSVKTYRYYDPA--TRG-LN------ 164 (407)
Q Consensus 107 ~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~-G------------~~~~~v~~~~~~--~~~-~d------ 164 (407)
+||++|++.++++.+......+|+...-+|++........ | -.+..++..+.. .++ .+
T Consensus 687 nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 766 (1013)
T PRK06148 687 NSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRR 766 (1013)
T ss_pred CCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHH
Confidence 9999999999988877765678999888887765432211 1 011111110000 011 01
Q ss_pred -hhhHHHHHH---cC-CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHH
Q 015435 165 -FQGLLEDLR---AA-PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFV 239 (407)
Q Consensus 165 -~~~l~~~i~---~~-~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~ 239 (407)
.+.+++.+. .. ....++++-+-..+......+++.++++.++|++||+++|+||+..+|+..+. ..+....+.
T Consensus 767 ~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~--~~~a~e~~g 844 (1013)
T PRK06148 767 FAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGS--HWWAFETQG 844 (1013)
T ss_pred HHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCC--cchhhhhcC
Confidence 134554443 22 23455555433344333457899999999999999999999999999976542 123333221
Q ss_pred HcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhh-hcccCCCChhHHHHHHHHhcChhhHHhHHHHH
Q 015435 240 ADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVI-RPMYSSPPIHGASIVATILKDSTMYKEWTLEL 318 (407)
Q Consensus 240 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 318 (407)
- ..++ -+++|.+| .|+++|.+ ++. ++ +.+.+.... ...+++.+++++.++.+.|+-.. +
T Consensus 845 v-~PDi---vt~gK~lg-gG~Plgav--~~~-~e----i~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~------~-- 904 (1013)
T PRK06148 845 V-VPDI---VTMGKPIG-NGHPMGAV--VTT-RE----IADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIE------D-- 904 (1013)
T ss_pred C-Ccce---eeeccccc-CCcceEEE--EEc-HH----HHhhccCCCccccCCCCCHHHHHHHHHHHHHHh------h--
Confidence 1 1223 33799998 78999999 565 44 444333221 12455778888888888776321 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCceeEEec--C-C-----CH---HHHHHhHhhccEEEcCCC------
Q 015435 319 KAMADRIISMRQQLFDALSARGTPG-DWSHIIKQIGMFTFT--G-L-----NS---EQVAFMTKEYHIYMTSDG------ 380 (407)
Q Consensus 319 ~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~--~-~-----~~---~~~~~~l~~~gi~~~~gg------ 380 (407)
+.+.++.+++.++|.+.|+++.... .+.-+...|.++.+- . - +. ..+...+.++||.+.+.|
T Consensus 905 e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~~~vl 984 (1013)
T PRK06148 905 EDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTEGPHDNVL 984 (1013)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEeccCCCCCEE
Confidence 2445666677777777776652100 011122334333321 1 0 11 223444455899998754
Q ss_pred eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 381 RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 381 Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
||...- +++++++.++++|.++++++
T Consensus 985 r~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 985 KIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred EEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 665432 58899999999999999764
No 308
>PRK06149 hypothetical protein; Provisional
Probab=99.73 E-value=1.2e-15 Score=160.01 Aligned_cols=343 Identities=12% Similarity=0.050 Sum_probs=202.6
Q ss_pred cCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 28 DTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 28 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
..++.+||+..|.. +.| ..++++++++.+++. .......| ......++.+++++.+.. ..+.+++ ++
T Consensus 582 ~dG~~ylD~~~~~~--~lG-h~hp~v~~Ai~~q~~-~l~~~~~~-~~~~~~elae~L~~~~p~------~~~~v~f--~~ 648 (972)
T PRK06149 582 MAGRSYLDMVNNVT--VLG-HGHPRLAAAAARQWS-LLNTNSRF-HYAAVAEFSERLAALAPD------GLDTVFL--VN 648 (972)
T ss_pred CCCCEEEECCCCcc--ccC-CCCHHHHHHHHHHHH-hccccccc-cCHHHHHHHHHHHHhCCC------CcCEEEE--eC
Confidence 45789999998753 455 567788888888876 21111112 222345566666665521 1268999 99
Q ss_pred CcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhc-C-----c--------eeeEEEeecCCC--CC-cC-----h
Q 015435 108 SGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLA-G-----L--------SVKTYRYYDPAT--RG-LN-----F 165 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~-G-----~--------~~~~v~~~~~~~--~~-~d-----~ 165 (407)
||++|++.++++.+.......|+..+-+|++........ + . .+..++..+... +. .+ .
T Consensus 649 SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~ 728 (972)
T PRK06149 649 SGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYV 728 (972)
T ss_pred CchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHH
Confidence 999999999988877765567888888888654322110 0 0 122222211000 11 11 2
Q ss_pred hhHHHHHH---cC-CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHc
Q 015435 166 QGLLEDLR---AA-PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVAD 241 (407)
Q Consensus 166 ~~l~~~i~---~~-~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~ 241 (407)
+++++.+. +. .+..++++-+-..+......+++.++++.++|++||+++|+||+..+|+..+. ..+....+.-
T Consensus 729 ~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~--~~~a~e~~gv- 805 (972)
T PRK06149 729 RDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGH--YFWGFEQQGV- 805 (972)
T ss_pred HHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCc--cchhhhhcCC-
Confidence 34333332 12 23445555444455444568899999999999999999999999988877642 1233332211
Q ss_pred CCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhh-hhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHH
Q 015435 242 GGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKL-VIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKA 320 (407)
Q Consensus 242 ~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 320 (407)
..+++ +++|.+| .|..+|++ ++. +++.+.+.. .....+.+.+++++.++.+.|+-.. -++
T Consensus 806 ~PDiv---t~gK~lg-~G~Pl~av--~~~-----~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~--------~e~ 866 (972)
T PRK06149 806 VPDII---TMAKGMG-NGHPLGAV--ITR-----REIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLR--------EEK 866 (972)
T ss_pred CCCEE---Eeccccc-CCeeeEEE--EEc-----HHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHH--------hcC
Confidence 22333 5899998 78999998 565 344444432 1111234678888888888776321 124
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCC-CcccccCCceeEEe--cC------CCH---HHHHHhHhhccEEEcCCC------eE
Q 015435 321 MADRIISMRQQLFDALSARGTPG-DWSHIIKQIGMFTF--TG------LNS---EQVAFMTKEYHIYMTSDG------RI 382 (407)
Q Consensus 321 ~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~--~~------~~~---~~~~~~l~~~gi~~~~gg------Ri 382 (407)
+.++.+++.++|.+.|+++.... .+..+...|.++.+ +. -+. ..+...+.++||.+.+.| ||
T Consensus 867 l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g~~~~vl~~ 946 (972)
T PRK06149 867 LQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTGDHLNILKI 946 (972)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeecCCCCCEEEE
Confidence 55666667777777777652100 02222333433332 11 011 223344455899998865 44
Q ss_pred Eec-CCCCCChhHHHHHHHHHHHh
Q 015435 383 SMA-GLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 383 s~~-~~~~e~i~~~~~~l~~~l~~ 405 (407)
... .+++++++.++++|.+++++
T Consensus 947 ~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 947 KPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred ECCCcCCHHHHHHHHHHHHHHHHh
Confidence 332 25889999999999999875
No 309
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.73 E-value=1.7e-15 Score=135.89 Aligned_cols=287 Identities=18% Similarity=0.270 Sum_probs=192.2
Q ss_pred cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHH---hhcC--ceee
Q 015435 77 LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVF---TLAG--LSVK 151 (407)
Q Consensus 77 ~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~---~~~G--~~~~ 151 (407)
++.+....++.+|+..... +|..||++|+..+ ++++++|||+|+..+..+.+|...- ...| ++++
T Consensus 73 vE~laierak~LFga~~an--------VQPhSGs~AN~av--~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v 142 (413)
T COG0112 73 VEELAIERAKKLFGAEYAN--------VQPHSGSQANQAV--YLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVV 142 (413)
T ss_pred HHHHHHHHHHHHhCCCccc--------cCCCCchHHHHHH--HHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeE
Confidence 5566666666666765443 6678889999888 5777999999999987776665433 2222 4777
Q ss_pred EEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeecccc-ccccCCCCCc
Q 015435 152 TYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAY-QGFASGSLDA 230 (407)
Q Consensus 152 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y-~~~~~~~~~~ 230 (407)
.+++ ++++..+|.|++++...+. ++.++|...-.. .-.-|++++.++|++.|.+|.+|.++ ++++..+..+
T Consensus 143 ~Y~v-d~et~~IDyD~~~k~a~e~--kPK~ii~G~SaY-----~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p 214 (413)
T COG0112 143 SYGV-DPETGLIDYDEVEKLAKEV--KPKLIIAGGSAY-----SRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHP 214 (413)
T ss_pred eccc-ccccCccCHHHHHHHHHHh--CCCEEEECcccc-----ccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCC
Confidence 7777 4667899999999998843 444455232222 22448999999999999999999997 6666655322
Q ss_pred hhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhh
Q 015435 231 DAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTM 310 (407)
Q Consensus 231 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 310 (407)
++. ....++.+|.+|++ +|-|-|.+ ++.++ ++.++++....+...+.|-+...++.++--.+.+
T Consensus 215 ~P~--------~~AdvVTtTTHKTl--rGPrGG~I--l~~~e----el~kkin~aVFPg~qggpl~HviAakaVa~~Eal 278 (413)
T COG0112 215 NPL--------PHADVVTTTTHKTL--RGPRGGII--LTNDE----ELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEAL 278 (413)
T ss_pred CCC--------CccceEeCCcccCC--CCCCceEE--EeccH----HHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHc
Confidence 111 12457888999986 68897887 67753 4566666655555445554444444332211221
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEe-c-----CCCHHHHHHhHhhccEEEcCC-----
Q 015435 311 YKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTF-T-----GLNSEQVAFMTKEYHIYMTSD----- 379 (407)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~l~~~gi~~~~g----- 379 (407)
+...++..+++.+|.+.|.+.|.+.| +.+....+-...+ + +++.+.+..+|++.||.+...
T Consensus 279 ----~p~fk~Ya~qVv~NAkaLAe~l~~~G----~~vvsGgTdnHl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D 350 (413)
T COG0112 279 ----EPEFKEYAKQVVKNAKALAEALKERG----FKVVSGGTDNHLVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFD 350 (413)
T ss_pred ----ChhHHHHHHHHHHHHHHHHHHHHHcC----CeEecCCccceEEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCC
Confidence 12345666777789999999999988 6655432222222 2 446888999999999998543
Q ss_pred --------C-eEEec-----CCCCCChhHHHHHHHHHHHh
Q 015435 380 --------G-RISMA-----GLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 380 --------g-Ris~~-----~~~~e~i~~~~~~l~~~l~~ 405 (407)
| ||... +..++|++++.+.|.++++.
T Consensus 351 ~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 351 PESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred CCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 3 88532 24567899999999888864
No 310
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.72 E-value=5.8e-15 Score=138.54 Aligned_cols=305 Identities=14% Similarity=0.076 Sum_probs=186.8
Q ss_pred cCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCC-CCCChHHHHhhcCc
Q 015435 70 EYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQP-TWGNHPKVFTLAGL 148 (407)
Q Consensus 70 ~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p-~y~~~~~~~~~~G~ 148 (407)
.|.......+|.+.+++++ +. ++++. |++||.|+.++. ...+++||.| +.. .+......+...|.
T Consensus 73 ~Yagd~s~~~LE~~vAe~l-G~-------e~aV~--v~sGTaAl~ll~--~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga 138 (460)
T PRK13237 73 AYAGSRNFYHLEETVQEYY-GF-------KHVVP--THQGRGAENLLS--RIAIKPGQYV--PGNMYFTTTRYHQELNGG 138 (460)
T ss_pred hhcCCCcHHHHHHHHHHHH-CC-------CeEEE--eCCHHHHHHHHH--HhCCCCcCEE--CCccchHhhHHHHHhCCc
Confidence 4878888999999999988 65 67888 999999999873 3347799965 444 34444444788888
Q ss_pred eeeEEEe--------ecCCCCCcChhhHHHHHHcC--CCCcEEEEecCCCCCC-CCCCCHHHHHHHHHHHHHcCceeeec
Q 015435 149 SVKTYRY--------YDPATRGLNFQGLLEDLRAA--PSGAIVLLHACAHNPT-GVDPTLEQWEQIRQLMRSKGLLPFFD 217 (407)
Q Consensus 149 ~~~~v~~--------~~~~~~~~d~~~l~~~i~~~--~~~~~v~i~~~p~NPt-G~~~~~~~l~~i~~~~~~~~~~li~D 217 (407)
..+.+.. .++.++.+|++++++.+++. ++++++.+ ..++|.. |...|.+++++|.++|++||+.||+|
T Consensus 139 ~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a-~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~D 217 (460)
T PRK13237 139 IFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICL-AVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFD 217 (460)
T ss_pred EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEE-EEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEE
Confidence 6555531 12456789999999999742 22334444 3456776 78899999999999999999999999
Q ss_pred cccccc-c-CC---CCCchhHHHHHHH-Hc-CCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhccc
Q 015435 218 SAYQGF-A-SG---SLDADAQSVRMFV-AD-GGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMY 290 (407)
Q Consensus 218 ~~y~~~-~-~~---~~~~~~~~~~~~~-~~-~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~ 290 (407)
.+...- . +- .......++..+. +. .-...+..|++|.++.+ . -|++ +++|+++.+++....-.+-...+
T Consensus 218 aAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~-~-GG~i--~t~D~eL~~~~r~~~~~~eG~~t 293 (460)
T PRK13237 218 ATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVN-I-GGFL--AMNDEELFDEAKELVVVYEGMPS 293 (460)
T ss_pred CcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCC-C-ceEE--EECCHHHHHHHHHhccccCCCcC
Confidence 996421 1 00 0000111222111 11 12346677899998754 1 2777 78888766665543211111111
Q ss_pred C-CCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCC---------
Q 015435 291 S-SPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL--------- 360 (407)
Q Consensus 291 ~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~--------- 360 (407)
+ +.+.-.+.+++..+... .+. ...+.--++.++|.+.|.+.| +.+..|.||--++++.
T Consensus 294 ygg~~grd~~alAvgl~E~------~~~--~y~~~ri~~~~~l~~~L~~~G----vpv~~p~ggH~v~vda~~~lph~~~ 361 (460)
T PRK13237 294 YGGMAGRDMEAMAIGIEES------VQY--EYIEHRVGQVRYLGEKLLAAG----VPIVEPVGGHAVFLDARRFLPHLPQ 361 (460)
T ss_pred CCChhhhHHHHHHhHHHhh------chH--HHHHHHHHHHHHHHHHHHHCC----CceecCCCceEEEEEhHHhCCCCCc
Confidence 1 11111222222222211 111 222333346789999999999 6677777776566522
Q ss_pred ---CHH-HHHHhHhhccEEEcCC-----------C----------eEEecC--CCCCChhHHHHHHHHHHHh
Q 015435 361 ---NSE-QVAFMTKEYHIYMTSD-----------G----------RISMAG--LSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 361 ---~~~-~~~~~l~~~gi~~~~g-----------g----------Ris~~~--~~~e~i~~~~~~l~~~l~~ 405 (407)
.+. .+.++-.+.||...-- | |+++.. .|.+.++.+.++|..+.++
T Consensus 362 ~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 362 DQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred ccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 222 2345555577754321 1 887764 3668899999999888754
No 311
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.72 E-value=1.4e-15 Score=139.07 Aligned_cols=205 Identities=19% Similarity=0.134 Sum_probs=150.6
Q ss_pred cCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhc---ccccc-ccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEE
Q 015435 28 DTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVN---DQSRV-KEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTT 103 (407)
Q Consensus 28 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~ 103 (407)
..+.+++.+..+. -+ |.++.+..+....+.. ++... ..|-...+.+..|+.+|+++ +. ++.+|+|
T Consensus 39 ~~~~~~vyld~~a----t~-p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklI-nA-----d~~dIiF 107 (428)
T KOG1549|consen 39 HHGTRPVYLDNQA----TG-PMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLI-NA-----DPSDIVF 107 (428)
T ss_pred cCCCccEEEecCc----CC-CCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHh-CC-----CCCcEEE
Confidence 3456777777765 24 6677777776655542 12111 12222344888999999999 43 2467999
Q ss_pred eecCCcccHHHHHHHHHHhhcCCC----eEEecCCCCCChHHHHh---hcCceeeEEEeecCCCCCcChhhHHHHHHcCC
Q 015435 104 VQCLSGTGSLRVGAEFLARHYHQL----TIYIPQPTWGNHPKVFT---LAGLSVKTYRYYDPATRGLNFQGLLEDLRAAP 176 (407)
Q Consensus 104 ~~t~g~t~a~~~~~~~~~~~~~gd----~Vi~~~p~y~~~~~~~~---~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 176 (407)
|+|+|+++.++++-.. +..+| .|++.+-.|++....++ ..|+.++.+|.. ..+.+|.+.+++.++ +
T Consensus 108 --ts~ATEs~Nlvl~~v~-~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~~~d~~~~~~~i~--~ 180 (428)
T KOG1549|consen 108 --TSGATESNNLVLKGVA-RFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSGLVDISKLREAIR--S 180 (428)
T ss_pred --eCCchHHHHHHHHHhh-ccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccccccHHHHHHhcC--C
Confidence 9999999999954332 23556 89999999998887666 569999999993 567889999999999 7
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCcccc
Q 015435 177 SGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMG 256 (407)
Q Consensus 177 ~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 256 (407)
+++++.| ...+|-+|++.+ +++|+++|+++|+.+++|.+++-... + ..+.. -+..++..|.+|.||
T Consensus 181 ~T~lv~I-~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQavG~i---~---vDV~e----ln~D~~s~s~HK~yg 246 (428)
T KOG1549|consen 181 KTRLVSI-MHVNNEIGVLQP---VKEIVKICREEGVQVHVDAAQAVGKI---P---VDVQE----LNADFLSISAHKIYG 246 (428)
T ss_pred CceEEEE-EecccCcccccc---HHHHHHHhCcCCcEEEeehhhhcCCc---c---ccHHH----cCchheeeecccccC
Confidence 8888888 788999999765 88888889999999999999652221 1 11211 234577889999999
Q ss_pred ccCCCcceeE
Q 015435 257 LYGERVGALS 266 (407)
Q Consensus 257 ~~G~r~G~~~ 266 (407)
.+| +|+++
T Consensus 247 p~~--iGaLY 254 (428)
T KOG1549|consen 247 PPG--IGALY 254 (428)
T ss_pred CCc--ceEEE
Confidence 999 89995
No 312
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.72 E-value=1.5e-14 Score=130.02 Aligned_cols=344 Identities=14% Similarity=0.093 Sum_probs=201.5
Q ss_pred cCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcH--HHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 28 DTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLV--DFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 28 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~--~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
..+.++||+..++...-.| +..+++.+++.+++. . ..|...+...++ ++.+.+.+.. ++. +.+.|.+
T Consensus 53 ~~g~EyiD~~ssw~~~~~G-hanpev~ral~~q~~--k-~~hs~~~~~t~eav~l~~~l~~~~-~~~----~~~rvff-- 121 (433)
T KOG1401|consen 53 PDGKEYIDFTSSWAVTILG-HANPEVARALAEQAK--K-LGHSSNGYFTLEAVELEEVLSAVL-GKG----SAERVFF-- 121 (433)
T ss_pred CCcceeeeeccceeccccC-CCCHHHHHHHHHHHh--h-heeccCccccHHHHHHHHHHHhcc-cCC----CccEEEE--
Confidence 4678999999998866556 556666666666665 2 122222222222 2333333333 322 4589999
Q ss_pred cCCcccHHHHHHHHHHhhcCC----C--eEEecCCCCCChHHHHh-hcCceeeEEEeec--CC---CCCcChhhHHHHHH
Q 015435 106 CLSGTGSLRVGAEFLARHYHQ----L--TIYIPQPTWGNHPKVFT-LAGLSVKTYRYYD--PA---TRGLNFQGLLEDLR 173 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~~g----d--~Vi~~~p~y~~~~~~~~-~~G~~~~~v~~~~--~~---~~~~d~~~l~~~i~ 173 (407)
+++||+|++.++++.+...-- + .+|....+|++....+. ..+......|... ++ ...-|...+++.++
T Consensus 122 ~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~ 201 (433)
T KOG1401|consen 122 CNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFE 201 (433)
T ss_pred ecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHH
Confidence 999999999998887665421 2 38888888876644333 2233222222210 00 01227899999998
Q ss_pred cCCC-CcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEec
Q 015435 174 AAPS-GAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSY 251 (407)
Q Consensus 174 ~~~~-~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 251 (407)
.+.. ..++++ -.-+-..|.+ ..++.+..|.+.|+++|+++|.||+..+|...+ ..+....+.- ..+ +.++
T Consensus 202 ~h~~~IaAVIv-EPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g---~~~a~e~~~~-~PD---I~t~ 273 (433)
T KOG1401|consen 202 SHKGEIAAVIV-EPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLG---YGWAQEYFGV-TPD---ITTV 273 (433)
T ss_pred hCCCceEEEEE-ecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccc---hHHHHHHhCc-CCc---ceee
Confidence 6643 355555 3334444555 778999999999999999999999999988765 3455444432 222 3347
Q ss_pred CccccccCCCcceeEEeecChhhHHHHHHHHhhhhh---cccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHH
Q 015435 252 AKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIR---PMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISM 328 (407)
Q Consensus 252 sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 328 (407)
.|.++ .|+++|.. ++. +++.+.++.... ..+++.+++++.++...++... .. +.++++.+.-...
T Consensus 274 aK~L~-gGlPigA~--~v~-----~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~-~~---e~~k~vs~~~k~L 341 (433)
T KOG1401|consen 274 AKPLG-GGLPIGAT--GVR-----DKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELK-DP---ETLKNVSKIGKEL 341 (433)
T ss_pred hhhcc-CCceeEEE--eeh-----HHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHc-CH---HHHHHHHHHHHHH
Confidence 89998 78999998 566 556555554433 4566888999998888776321 00 2334444444455
Q ss_pred HHHHHHHHHhcCCCCCcccccCCceeEEec----CC----CH--H---HHHH---hHhhccEEEcCCCeEEecCCCCCCh
Q 015435 329 RQQLFDALSARGTPGDWSHIIKQIGMFTFT----GL----NS--E---QVAF---MTKEYHIYMTSDGRISMAGLSSKTV 392 (407)
Q Consensus 329 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~----~~----~~--~---~~~~---~l~~~gi~~~~ggRis~~~~~~e~i 392 (407)
++.+.+.+.+.+.. ....... +++... ++ +. + .... .+.+.|+.+.|-+-++..+ ++|.+
T Consensus 342 ~~~l~e~~~~~~~~--i~g~~gr-gl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~~~~gv~i~P~~~l~~~~-~~E~i 417 (433)
T KOG1401|consen 342 RKLLDEYLKKTPNS--ICGGVGR-GLVIGFEFEGPVYKFADAAREQGLLILTLGKGLLEEGVRIAPIYLLTVEH-TPEVI 417 (433)
T ss_pred HHHHHHHhccCCCc--eeeeeee-EEEEEEEEeechhhhhhhhhhhhHHHHHHhcccccceEEEeccccccccC-cHHHH
Confidence 55555555443311 1111111 121111 11 11 1 1111 1112456666633333343 57889
Q ss_pred hHHHHHHHHHHHhh
Q 015435 393 PHLTDAIHAAVTRM 406 (407)
Q Consensus 393 ~~~~~~l~~~l~~~ 406 (407)
+++++.+.+.+.++
T Consensus 418 ~~~l~i~~~~l~~~ 431 (433)
T KOG1401|consen 418 QRLLTILEKVLSAL 431 (433)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999988765
No 313
>PRK02769 histidine decarboxylase; Provisional
Probab=99.71 E-value=5.6e-15 Score=138.93 Aligned_cols=291 Identities=16% Similarity=0.180 Sum_probs=180.5
Q ss_pred HHHHHHHHHHhCCCCCCCCCCce--EEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEee
Q 015435 79 DFNKLSAKLILGADSPAIKDNRV--TTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYY 156 (407)
Q Consensus 79 ~l~~~~a~~~~~~~~~~~~~~~i--~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~ 156 (407)
+.++.+++++ +.. ++++ .+ |+|||+++..+....+.+.+++.|++++..|.+...+++.+|.+.+.++..
T Consensus 69 ~~~~~~a~l~-g~~-----~~~~~G~~--TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~ 140 (380)
T PRK02769 69 DVMNFFAELF-KIP-----FNESWGYI--TNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSL 140 (380)
T ss_pred HHHHHHHHHh-CCC-----CCCCCEEE--ecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccC
Confidence 4455556655 321 2344 77 999999987664333334578899999999999999999999999999883
Q ss_pred cCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC---ceeeeccccccccCCCCCchhH
Q 015435 157 DPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKG---LLPFFDSAYQGFASGSLDADAQ 233 (407)
Q Consensus 157 ~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~---~~li~D~~y~~~~~~~~~~~~~ 233 (407)
+ ++.+|+++|++.+.+....+.+++.+.++|+||.+ +++++|+++|++|| +++.+|.+++.+...-.+ ...
T Consensus 141 -~-~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~i---dpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~-~~~ 214 (380)
T PRK02769 141 -P-NGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAI---DNIKEIQEILKKIGIDDYYIHADAALSGMILPFVN-NPP 214 (380)
T ss_pred -C-CCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCccc---CCHHHHHHHHHHhCCCceEEEEEecccceeecccC-ccc
Confidence 3 56799999999998432234444448899999995 45888888899998 699999998775532100 000
Q ss_pred HHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHH---HHhhhhhcccCCCChhHHHHHHHHhcChhh
Q 015435 234 SVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVES---QLKLVIRPMYSSPPIHGASIVATILKDSTM 310 (407)
Q Consensus 234 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 310 (407)
.+. + . .....+..|.+|.++.| ..+|.+ +.+++ ..+.+.. .+.........+.+......+-..|+...
T Consensus 215 ~~d-~-~-~~vDsis~s~HK~~~~P-~g~G~l--~~r~~-~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg- 286 (380)
T PRK02769 215 PFS-F-A-DGIDSIAISGHKFIGSP-MPCGIV--LAKKK-YVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLG- 286 (380)
T ss_pred cCC-c-c-CCCCEEEECCcccCCCC-CCcEEE--EEehh-hhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHC-
Confidence 110 1 1 13456778999987633 557888 56632 2222211 00000001111222222222222232211
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCCHHHHHHhHhhccEEEcCCC---eEEecC-
Q 015435 311 YKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDG---RISMAG- 386 (407)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~gg---Ris~~~- 386 (407)
....++..++..+..+++.+.|++.|. ..+..|......|...+.+. . +|..+.+.+ ||.+..
T Consensus 287 ----~~G~~~~~~~~~~la~~l~~~L~~~g~---~~~~~p~~~~v~f~~~~~~~----~--~~w~l~~~~~~~hi~~~~~ 353 (380)
T PRK02769 287 ----SKGLRQRVQHCLDMAQYAVDRLQANGI---PAWRNPNSITVVFPCPSERI----W--KKWHLATSGNQAHIITMPH 353 (380)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHhCCC---EEEcCCCceEEEEcCCCHHH----H--hCeeEcccCCEEEEEECCC
Confidence 144677788899999999999988773 23445655555554333322 1 345444433 887654
Q ss_pred CCCCChhHHHHHHHHHHH
Q 015435 387 LSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 387 ~~~e~i~~~~~~l~~~l~ 404 (407)
++++.++.+++.|...+.
T Consensus 354 ~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 354 HNKQQIDSLIDELIFDLK 371 (380)
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 577788999988887664
No 314
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.71 E-value=7.8e-15 Score=141.19 Aligned_cols=344 Identities=12% Similarity=0.049 Sum_probs=192.5
Q ss_pred CCCCeeeeeeeeeecCCCccccchhHH--HHHHHHhccc---cccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEE
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLVLNVVR--KAEQLLVNDQ---SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTT 103 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~ 103 (407)
.++++||+..|....+.| ..++.+++ ++.+++.+-. .....| ......++.+.+++.. ... ..+.+++
T Consensus 43 dG~~ylD~~~g~~~~~lG-h~~p~v~~~~ai~~ql~~l~~~~~~~~~~-~~~~~~~la~~l~~~~-~p~----~~~~v~f 115 (443)
T PRK08297 43 TGRRYLDMFTFFASSALG-MNHPALADDPEFRAELGRAALNKPSNSDV-YTVEMARFVDTFARVL-GDP----ELPHLFF 115 (443)
T ss_pred CCCEeeecccCHhhhcCC-CCChHHhhHHHHHHHHHHhhhhccccCCc-CCHHHHHHHHHHHhhc-CCC----CCCEEEE
Confidence 578999999987665667 66777877 7777775100 001112 1222333444444433 111 1268999
Q ss_pred eecCCcccHHHHHHHHHHhhc------CC------CeEEecCCCCCChHHHHhhc-Ccee-----------eEEEeec--
Q 015435 104 VQCLSGTGSLRVGAEFLARHY------HQ------LTIYIPQPTWGNHPKVFTLA-GLSV-----------KTYRYYD-- 157 (407)
Q Consensus 104 ~~t~g~t~a~~~~~~~~~~~~------~g------d~Vi~~~p~y~~~~~~~~~~-G~~~-----------~~v~~~~-- 157 (407)
++||++|++.++++..... .| .+|+...-+|++........ |... ..++...
T Consensus 116 --~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (443)
T PRK08297 116 --VDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLR 193 (443)
T ss_pred --eCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCC
Confidence 9999999999998876541 12 46888888888776544422 2110 0011000
Q ss_pred -CC-CCC---------cChhhHHHHHHcCCC-CcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHHcCceeeecccccccc
Q 015435 158 -PA-TRG---------LNFQGLLEDLRAAPS-GAIVLLHACAHNPTGV-DPTLEQWEQIRQLMRSKGLLPFFDSAYQGFA 224 (407)
Q Consensus 158 -~~-~~~---------~d~~~l~~~i~~~~~-~~~v~i~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~ 224 (407)
+. ... -+++++++.+.+.++ ..++++-+ .+...|. .++++.+++|.++|++||+++|+||++.+|+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EP-i~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfG 272 (443)
T PRK08297 194 FPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEP-IQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVG 272 (443)
T ss_pred CCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEcc-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccC
Confidence 00 000 023555666654433 34555533 2333354 4889999999999999999999999999987
Q ss_pred CCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHh-hhhhcccCCCChhHHHHHHH
Q 015435 225 SGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLK-LVIRPMYSSPPIHGASIVAT 303 (407)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 303 (407)
..+ ..+....+.- ..+++ .++|.++ +|.+ ++.+ ++.+.....+. ......+++.+++++.++.+
T Consensus 273 RtG---~~~a~~~~gv-~PDiv---~~gK~l~-----~~a~--l~~~-~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a 337 (443)
T PRK08297 273 LTG---TAWAYQQLGV-RPDIV---AFGKKTQ-----VCGI--MAGR-RVDEVEDNVFAVSSRINSTWGGNLVDMVRARR 337 (443)
T ss_pred ccc---hHHHHHhcCC-CCCEE---Eeccccc-----ccce--ecch-HHHHhhhhhccCccccCCCCCccHHHHHHHHH
Confidence 754 2333333211 22333 3789864 3344 2442 21111101111 11123445678888888877
Q ss_pred HhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCCcccccCCceeEEecCC-C---HHHHHHhHhhccEEEc
Q 015435 304 ILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARG--TPGDWSHIIKQIGMFTFTGL-N---SEQVAFMTKEYHIYMT 377 (407)
Q Consensus 304 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~l~~~gi~~~ 377 (407)
.++-.. -+.+.++.+++.+++.+.|+++. .+.....+...|.++ .+.+ + ...+...+.++||.+.
T Consensus 338 ~L~~l~--------~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~-~i~~~~~~~~~~~~~~l~~~Gvl~~ 408 (443)
T PRK08297 338 ILEVIE--------EDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMC-AFDLPTTADRDEVIRRLWEEGVLVL 408 (443)
T ss_pred HHHHHH--------hcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceEE-EEEecCHHHHHHHHHHHHHCCEEEe
Confidence 776321 11344555566666666665541 110011233444443 3333 2 2233444456899998
Q ss_pred CCC----eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 378 SDG----RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 378 ~gg----Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
+.| ||+.+- +++++++.++++|.++++++
T Consensus 409 ~~~~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 409 PCGERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred cCCCCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 865 664332 48899999999999999875
No 315
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.71 E-value=3.1e-15 Score=143.82 Aligned_cols=328 Identities=16% Similarity=0.162 Sum_probs=186.4
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCC-CCCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYL-PIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
...++++||+..|....+.| ..++.+++++.+++. ... .+. +.....++.+.+++...+ .+.+.+
T Consensus 44 D~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~q~~--~~~--~~~~~~~~~~~la~~l~~~~p~-------~~~v~f-- 109 (431)
T PRK06209 44 DVDGNEYIEYGMGLRAVGLG-HAYPPVVEAVREALQ--DGC--NFTRPSAIELDAAESFLELIDG-------ADMVKF-- 109 (431)
T ss_pred eCCCCEEEEccccccchhcC-CCCHHHHHHHHHHHH--hCc--CCCCCCHHHHHHHHHHHHhCCc-------cceEEE--
Confidence 45678999999997766677 667788888888886 221 232 222223566677765521 157999
Q ss_pred cCCcccHHHHHHHHHHhhcCCCeEEec-CCCCCChHHHHh-----hcCce--e--eEEEeecCCCCCcChhhHHHHHHcC
Q 015435 106 CLSGTGSLRVGAEFLARHYHQLTIYIP-QPTWGNHPKVFT-----LAGLS--V--KTYRYYDPATRGLNFQGLLEDLRAA 175 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~~gd~Vi~~-~p~y~~~~~~~~-----~~G~~--~--~~v~~~~~~~~~~d~~~l~~~i~~~ 175 (407)
++||++|++.++++.+.......|+.. .-+|..+..... ..|.. . ..+.. + --|++++++.+.+.
T Consensus 110 ~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~--~---~~d~~~l~~~l~~~ 184 (431)
T PRK06209 110 CKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTF--R---YNDIASLEALFEDH 184 (431)
T ss_pred ecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhcccccc--C---CCCHHHHHHHHHhC
Confidence 999999999999887766433455554 223322111100 01110 0 01111 1 12788899888644
Q ss_pred CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccc
Q 015435 176 PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNM 255 (407)
Q Consensus 176 ~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 255 (407)
++..+.++ ..|- .|...+.+.+++|.++|++||+++|+||++.++.... ........-..+ +.+++|.+
T Consensus 185 ~~~~aavi-~Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~-----~g~~~~~gv~PD---i~t~gK~l 253 (431)
T PRK06209 185 PGRIACVI-LEPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHM-----RGAQKLYGIVPD---LSCFGKAL 253 (431)
T ss_pred CCCEEEEE-Eccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCc-----chhhHHhCCCcc---eeeehhhh
Confidence 33333333 2332 4557789999999999999999999999988775421 111111111122 25589999
Q ss_pred cccCCCcceeEEeecChhhHHHHHHH--Hh------hhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHH
Q 015435 256 GLYGERVGALSIVCKTEDVASRVESQ--LK------LVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIIS 327 (407)
Q Consensus 256 ~~~G~r~G~~~~v~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 327 (407)
| .|+.+|++ +++ +++.+. +. .+....+.+++++++.++.+.|+... + +...+++++
T Consensus 254 g-gG~p~~av--~~~-----~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~------~--~~~~~~~~~ 317 (431)
T PRK06209 254 G-NGFAVSAL--AGK-----REYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYR------D--EDVIERLHE 317 (431)
T ss_pred c-CCcccEEE--EEH-----HHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHh------c--cCHHHHHHH
Confidence 8 67888988 454 334433 10 11112233556677777766665321 1 123445555
Q ss_pred HHHHHHHHHHh----cCCCCCcccccCCceeEE--ec--C---C-CHH---HHHHhHhhccEEEcCCCeEEecCCCCCCh
Q 015435 328 MRQQLFDALSA----RGTPGDWSHIIKQIGMFT--FT--G---L-NSE---QVAFMTKEYHIYMTSDGRISMAGLSSKTV 392 (407)
Q Consensus 328 ~~~~l~~~l~~----~~~~~~~~~~~~~~~~~~--~~--~---~-~~~---~~~~~l~~~gi~~~~ggRis~~~~~~e~i 392 (407)
+.+++.+.|++ .+.. ......|..+. ++ + . ... .+...+.++|+.+.| -+|+.. ++++++
T Consensus 318 ~g~~l~~~L~~~~~~~~~~---~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~p~-l~is~~-ht~~dI 392 (431)
T PRK06209 318 QGAKLAAGVNEAAAEHGLQ---DHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIRRGVLMPS-LVVSYA-HGDADI 392 (431)
T ss_pred HHHHHHHHHHHHHHhCCCC---eEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHHCCccccc-cccccc-CCHHHH
Confidence 55555555544 3321 11111222221 11 1 1 111 233444557997743 256654 489999
Q ss_pred hHHHHHHHHHHHh
Q 015435 393 PHLTDAIHAAVTR 405 (407)
Q Consensus 393 ~~~~~~l~~~l~~ 405 (407)
+++++++.+++++
T Consensus 393 d~~l~~l~~~l~~ 405 (431)
T PRK06209 393 ERTIDAVHGALGV 405 (431)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998865
No 316
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.70 E-value=2.5e-15 Score=133.98 Aligned_cols=344 Identities=16% Similarity=0.125 Sum_probs=214.1
Q ss_pred hhHhhhhcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCc
Q 015435 21 VTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNR 100 (407)
Q Consensus 21 ~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~ 100 (407)
.++.+-..+++.++|+..|+...+.| ...++++.++.+++..-.-....|.. .-..++.++++..+.+.. +-
T Consensus 40 ~~~ylyDe~G~ryLD~f~Gi~tvslG-HchP~v~~a~~kQl~~l~H~t~~~~~-~pi~~~Ae~L~s~~P~~l------~~ 111 (442)
T KOG1404|consen 40 EGQYLYDEEGRRYLDAFGGIVTVSLG-HCHPDVVAAAVKQLKKLYHTTSGYLN-PPIHDLAEALVSKLPGDL------KV 111 (442)
T ss_pred ceEEEEcCCCceeehhhCCeEEEEcC-CCChHHHHHHHHhhhhhEEeeccccC-CcHHHHHHHHHHhCCCCc------eE
Confidence 33433356789999999999988888 88889999998888511112234533 346688888888884432 56
Q ss_pred eEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHh-hcCceeeEEEe------------ecCCCC--CcC-
Q 015435 101 VTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFT-LAGLSVKTYRY------------YDPATR--GLN- 164 (407)
Q Consensus 101 i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~-~~G~~~~~v~~------------~~~~~~--~~d- 164 (407)
++| ++||++|++++.++.+.....-.+|....+|.+...... .-|......+. .++..+ +-+
T Consensus 112 vfF--~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~ 189 (442)
T KOG1404|consen 112 VFF--VNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSN 189 (442)
T ss_pred EEE--ecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCc
Confidence 888 999999999998777665554567777777766544333 32332222211 111100 001
Q ss_pred --------hhhHHHHHHc-CCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHH
Q 015435 165 --------FQGLLEDLRA-APSGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQS 234 (407)
Q Consensus 165 --------~~~l~~~i~~-~~~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~ 234 (407)
.+++++.+.. .+++.+.++.-+-+--.|++ +++-.+++..++|+++|.++|.||+..+|+..+ ..|+
T Consensus 190 ~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG---~~wg 266 (442)
T KOG1404|consen 190 EEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG---HMWG 266 (442)
T ss_pred hhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc---cccc
Confidence 2344444432 35555666633334444555 889999999999999999999999999999876 3444
Q ss_pred HHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhh-hcccCCCChhHHHHHHHHhcChhhHHh
Q 015435 235 VRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVI-RPMYSSPPIHGASIVATILKDSTMYKE 313 (407)
Q Consensus 235 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~ 313 (407)
+.. .+-+==+-|++|.+| .|+++|.+ ++. ++ +.+.+.... ...+.+.+++++.+..++|+-..
T Consensus 267 fe~----h~v~PDIvTmAKgiG-nG~Pl~AV--vtt-~E----Ia~v~~~~~~~fnTyggnP~a~avg~aVL~Vik---- 330 (442)
T KOG1404|consen 267 FES----HGVVPDIVTMAKGIG-NGFPLGAV--VTT-PE----IADVLNQKSSHFNTYGGNPVACAVGLAVLKVIK---- 330 (442)
T ss_pred ccc----cCCCccHHHHHhhcc-CCCcceee--ecC-HH----HHHHHHhccccccccCCCchhHHHHHHHHHHHH----
Confidence 322 222222447999999 78999999 565 44 444444333 33455778888888877776321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC--CceeEEecCC----------C-H--HHHHHhHhhccEEEcC
Q 015435 314 WTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIK--QIGMFTFTGL----------N-S--EQVAFMTKEYHIYMTS 378 (407)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~--~~~~~~~~~~----------~-~--~~~~~~l~~~gi~~~~ 378 (407)
-+++.++..+...+|.+.|.++.-. .+.+.. .-|++.=+.+ . . -.+.+-++++|+.+..
T Consensus 331 ----ee~LqE~aa~vG~yl~~~l~~l~d~--h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~ 404 (442)
T KOG1404|consen 331 ----EENLQENAAEVGSYLLEKLAALKDK--HPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGK 404 (442)
T ss_pred ----HHhHHHHHHHHHHHHHHHHHHHhhc--CCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeec
Confidence 2345566667777888877765311 222221 1222221211 1 1 1344666779999977
Q ss_pred CC------eEEecC-CCCCChhHHHHHH
Q 015435 379 DG------RISMAG-LSSKTVPHLTDAI 399 (407)
Q Consensus 379 gg------Ris~~~-~~~e~i~~~~~~l 399 (407)
|| ||+..- +++||++-+++..
T Consensus 405 g~i~G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 405 GGIHGNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred ccccceEEEecCCeeccHHHHHHHHHHH
Confidence 75 886432 5889996666644
No 317
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.70 E-value=2.2e-14 Score=124.16 Aligned_cols=321 Identities=13% Similarity=0.149 Sum_probs=200.0
Q ss_pred cccchhHHHHHHHHhccccccccCCC--CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcC
Q 015435 48 PLVLNVVRKAEQLLVNDQSRVKEYLP--IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~y~~--~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~ 125 (407)
|.|.....++++++. .+ .....+| .+-.+++++-+...+ ...+. .-.++ ..+|+.+++.+ +...+.|
T Consensus 23 PGPsnl~~~V~~A~~-~~-~lgh~sPe~~qIm~~v~egikyVF-kT~n~----~tf~i--sgsGh~g~E~a--l~N~leP 91 (385)
T KOG2862|consen 23 PGPSNLSGRVQEAMS-RP-SLGHMSPEFVQIMDEVLEGIKYVF-KTANA----QTFVI--SGSGHSGWEAA--LVNLLEP 91 (385)
T ss_pred CCCcCCCHHHHHhhc-CC-ccccCCHHHHHHHHHHHHHHHHHh-ccCCC----ceEEE--ecCCcchHHHH--HHhhcCC
Confidence 666666677777775 22 2222233 122445555555544 33221 34555 77889999999 4666889
Q ss_pred CCeEEecCCC-C-CChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHH-HHH
Q 015435 126 QLTIYIPQPT-W-GNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQ-WEQ 202 (407)
Q Consensus 126 gd~Vi~~~p~-y-~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~-l~~ 202 (407)
||+|++.... | ..+.+..++.|++|..++. +.+....++++.+++..+ +..++++ ++....||+. .+ +..
T Consensus 92 gd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~--~~G~~~~le~i~~~lsqh-~p~~vfv-~hgdsSTgV~---q~~~~~ 164 (385)
T KOG2862|consen 92 GDNVLVVSTGTWGQRAADCARRYGAEVDVVEA--DIGQAVPLEEITEKLSQH-KPKAVFV-THGDSSTGVL---QDLLAI 164 (385)
T ss_pred CCeEEEEEechHHHHHHHHHHhhCceeeEEec--CcccCccHHHHHHHHHhc-CCceEEE-EecCcccccc---chHHHH
Confidence 9999888754 3 3456788899999999977 677899999999999853 3455555 6777788884 34 667
Q ss_pred HHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHH
Q 015435 203 IRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQL 282 (407)
Q Consensus 203 i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~ 282 (407)
+-++|++|+.++++|.+- .++..+...|.| +-++.+ .+--|.++.|. .++-+ +.++...+++.++-
T Consensus 165 ~g~lc~k~~~lllVD~Va-Slggt~F~mDew--------gVDvay-tgSQKaL~aP~-GLsii---sfS~ka~~~~~~rK 230 (385)
T KOG2862|consen 165 SGELCHKHEALLLVDTVA-SLGGTEFEMDEW--------GVDVAY-TGSQKALGAPA-GLSII---SFSDKALEAIRDRK 230 (385)
T ss_pred HHHHhhcCCeEEEEechh-hcCCccceehhh--------cccEEE-ecchhhcCCCC-Cccee---ecCHHHHHHHhhcc
Confidence 778899999999999974 344333322222 223444 44478887541 23334 66666555554433
Q ss_pred hhhh-------------------hcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 015435 283 KLVI-------------------RPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPG 343 (407)
Q Consensus 283 ~~~~-------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 343 (407)
.+.. +.+.-++|....+.+..+|... +++.+++..++++++.+.+...+++.|...
T Consensus 231 ~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I-----~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~ 305 (385)
T KOG2862|consen 231 TKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALI-----AEEGLENSWRRHREMSKWLKLSLEALGLQL 305 (385)
T ss_pred CCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 2110 1122245555555555555532 246789999999999999999999988321
Q ss_pred Cc---ccccCC-ceeEEecCCCHHHH-HHhHhhccEEEcCC-----C---eEEecC--CCCCChhHHHHHHHHHHHh
Q 015435 344 DW---SHIIKQ-IGMFTFTGLNSEQV-AFMTKEYHIYMTSD-----G---RISMAG--LSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 344 ~~---~~~~~~-~~~~~~~~~~~~~~-~~~l~~~gi~~~~g-----g---Ris~~~--~~~e~i~~~~~~l~~~l~~ 405 (407)
.. ....|. .+.-+-.+.|+..+ .++..++++.+..| | ||.+.+ .+.+.++..++.|+..+.+
T Consensus 306 fv~~e~~rlptvttv~vp~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 306 FVVDEELRLPTVTTVKVPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred eecChhhccCcceeeecCCCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 01 111121 11111225677665 55666556666554 2 997654 3568889999988888765
No 318
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.70 E-value=8.1e-15 Score=139.75 Aligned_cols=287 Identities=12% Similarity=0.084 Sum_probs=179.2
Q ss_pred ceEEeecCCcccHHHHHHHHHHhh------cCC-----CeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhH
Q 015435 100 RVTTVQCLSGTGSLRVGAEFLARH------YHQ-----LTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGL 168 (407)
Q Consensus 100 ~i~~~~t~g~t~a~~~~~~~~~~~------~~g-----d~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l 168 (407)
++.+..|+|||+|+.+++...... ..| ..|++++-.|.++.+.++..|++++.+|.+ +.++.+|+++|
T Consensus 101 ~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d-~~~~~vd~~~L 179 (431)
T TIGR01788 101 EAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMD-PGRYVIDPEQV 179 (431)
T ss_pred CCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecC-CCceeeCHHHH
Confidence 454422799999999885333211 112 368888899999999999999999999983 43357999999
Q ss_pred HHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc------CceeeeccccccccCCCCCchhHHHHHHHHcC
Q 015435 169 LEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSK------GLLPFFDSAYQGFASGSLDADAQSVRMFVADG 242 (407)
Q Consensus 169 ~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~------~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~ 242 (407)
++.+. +++.+|++ ...+|.||.+ +++++|+++|+++ |+++.+|.+|+++... ........ .+ ...
T Consensus 180 ~~~i~--~~t~lV~~-t~g~t~tG~i---dpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p-~~~~~~~~-~~-~~~ 250 (431)
T TIGR01788 180 VEAVD--ENTIGVVC-ILGTTYTGEY---EDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAP-FVYPDLEW-DF-RLP 250 (431)
T ss_pred HHHHh--hCCeEEEE-EeCCCCCccc---CCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHH-HhCCCchh-hc-CCC
Confidence 99998 55666555 7899999994 5688888889999 9999999999854410 00000111 01 112
Q ss_pred CcEEEEEecCccc-cccCCCcceeEEeecChhhH-HHHHH---HHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHH
Q 015435 243 GECLVAQSYAKNM-GLYGERVGALSIVCKTEDVA-SRVES---QLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLE 317 (407)
Q Consensus 243 ~~~i~~~s~sK~~-~~~G~r~G~~~~v~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 317 (407)
.-..+..|.+|.+ +.. .+|.+ ++++++.. +.+.. .+...........+..+..++..++. +...-...
T Consensus 251 ~~DSis~s~HK~~~~P~--g~G~l--~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~---l~~lG~~G 323 (431)
T TIGR01788 251 RVKSINVSGHKYGLVYP--GVGWV--IWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYN---FLRLGREG 323 (431)
T ss_pred CceEEEECchhccCCCC--CcEEE--EEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHH---HHHhcHHH
Confidence 3345778899975 444 47888 56654311 11100 11000000111112222111211211 00001145
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCccccc--CCceeEEec--C-----CCHHHHHHhHhhccEEE----cCC---C-
Q 015435 318 LKAMADRIISMRQQLFDALSARGTPGDWSHII--KQIGMFTFT--G-----LNSEQVAFMTKEYHIYM----TSD---G- 380 (407)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~--~~~~~~~~~--~-----~~~~~~~~~l~~~gi~~----~~g---g- 380 (407)
.++..++..++.+++.+.|++.+. +++.. +..+.+.|. + .+...+.+.|.++|+.+ .|. |
T Consensus 324 ~~~i~~~~~~la~~l~~~L~~~~~---~el~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~ 400 (431)
T TIGR01788 324 YRKIMQNSLDVARYLAEEIAKLGP---FEIISDGSGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKNAEDI 400 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC---EEEeeCCCCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCccCCe
Confidence 677778888999999999998864 66554 356666554 2 34455666777789864 332 3
Q ss_pred ---eEEec-CCCCCChhHHHHHHHHHHHhh
Q 015435 381 ---RISMA-GLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 381 ---Ris~~-~~~~e~i~~~~~~l~~~l~~~ 406 (407)
|+++. +++++.++.+++.|+.++..+
T Consensus 401 ~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 401 VVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred EEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 88775 357788999999999988765
No 319
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.69 E-value=2.4e-14 Score=130.76 Aligned_cols=277 Identities=17% Similarity=0.181 Sum_probs=183.2
Q ss_pred CcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHh----hcCceee
Q 015435 76 GLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFT----LAGLSVK 151 (407)
Q Consensus 76 g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~----~~G~~~~ 151 (407)
....+.+.+++.. +. .+.++ .+||..|+..+. ...+.+|+.+++.+..|.+....++ .+|+...
T Consensus 78 t~~~le~~iaal~-ga-------~~~l~--fsSGmaA~~~al--~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~ 145 (409)
T KOG0053|consen 78 TRDVLESGIAALE-GA-------AHALL--FSSGMAAITVAL--LHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGD 145 (409)
T ss_pred chHHHHHHHHHHh-CC-------ceEEE--ecccHHHHHHHH--HHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceee
Confidence 3455666677766 43 56878 999999999984 5557899999999999998887766 5677777
Q ss_pred EEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCch
Q 015435 152 TYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDAD 231 (407)
Q Consensus 152 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~ 231 (407)
.++. -+++++++++. +++.++++ -+|.||+..+. |+++|+++|+++|+++|+|+.+.....- +
T Consensus 146 ~vd~-------~~~~~~~~~i~--~~t~~V~~-ESPsNPll~v~---DI~~l~~la~~~g~~vvVDnTf~~p~~~----~ 208 (409)
T KOG0053|consen 146 FVDV-------DDLKKILKAIK--ENTKAVFL-ESPSNPLLKVP---DIEKLARLAHKYGFLVVVDNTFGSPYNQ----D 208 (409)
T ss_pred eech-------hhHHHHHHhhc--cCceEEEE-ECCCCCccccc---cHHHHHHHHhhCCCEEEEeCCcCccccc----C
Confidence 7755 37788888888 67899888 89999999965 6888888899999999999998766432 1
Q ss_pred hHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhH
Q 015435 232 AQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMY 311 (407)
Q Consensus 232 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 311 (407)
+.+ ....|++.|.+|.++..+-=+|.++ +..+++ +.+++...+....+++++..+....+-++...
T Consensus 209 pL~-------lGADIV~hSaTKyi~Ghsdvi~G~i-v~n~~~----~~~~l~~~~~~lg~~~~p~~~~ll~Rglktl~-- 274 (409)
T KOG0053|consen 209 PLP-------LGADIVVHSATKYIGGHSDVIGGSV-VLNSEE----LASRLKFLQEDLGWCEDPFDLFLLSRGLKTLH-- 274 (409)
T ss_pred hhh-------cCCCEEEEeeeeeecCCcceeeeEE-ecCcHH----HHHHHHHHHHHhcCCCCHHHHHHHhcCcchhh--
Confidence 111 2357999999999986666566652 343455 44445545555556777776666655544332
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CC-----Cccc----c-cCCceeEEecCCCHHHHHHhHhhccEE
Q 015435 312 KEWTLELKAMADRIISMRQQLFDALSARGT------PG-----DWSH----I-IKQIGMFTFTGLNSEQVAFMTKEYHIY 375 (407)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~-----~~~~----~-~~~~~~~~~~~~~~~~~~~~l~~~gi~ 375 (407)
.+.++..++...+.+.|+..+. |. .++. . ...|+.+..+..+.+...++.++-.+.
T Consensus 275 --------lRi~~~~ena~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~~~~a~kf~~~LK~~ 346 (409)
T KOG0053|consen 275 --------LRINKHSENALKIALLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGNEEHAKKFYDALKLF 346 (409)
T ss_pred --------hhHHHHHHHHHHHHHHhhhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcCCHHHHHHHHHhhhhh
Confidence 2223334444445555554421 10 0000 0 113444555555555555555544444
Q ss_pred -EcC--C------------------------C------eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 376 -MTS--D------------------------G------RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 376 -~~~--g------------------------g------Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
..+ | | |+|++ + |+++.+++-+.++++..
T Consensus 347 ~~a~SlG~~eSL~~~p~~mth~~~~e~~~~~Gi~~~LVRvSVG-i--Ed~~dL~~d~~~Al~~~ 407 (409)
T KOG0053|consen 347 TKAPSLGGNESLAEPPAIMTHASELEEREKFGIDPNLVRVSVG-I--EDIEDLIKDFQQALEKA 407 (409)
T ss_pred hcccCcCccchhhcchhhhccCCCHHHHHhcCCCCCcEEEEec-c--CCHHHHHHHHHHHHHhh
Confidence 222 1 1 99988 3 88999999999988754
No 320
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.69 E-value=9.2e-16 Score=128.71 Aligned_cols=165 Identities=25% Similarity=0.274 Sum_probs=120.6
Q ss_pred cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChH-HHHhhcCceeeEEEe
Q 015435 77 LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHP-KVFTLAGLSVKTYRY 155 (407)
Q Consensus 77 ~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~-~~~~~~G~~~~~v~~ 155 (407)
+.++++.+++++ + .+.+++.+ ++|+|+++.++. .....++++|+++.+.|++.. ..+...|.+++.++.
T Consensus 2 ~~~~~~~l~~~~-~-----~~~~~~~~--~~~~t~a~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~ 71 (170)
T cd01494 2 LEELEEKLARLL-Q-----PGNDKAVF--VPSGTGANEAAL--LALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPV 71 (170)
T ss_pred HHHHHHHHHHHc-C-----CCCCcEEE--eCCcHHHHHHHH--HHhCCCCCEEEEeecccceehhhHHHhcCCEEEEecc
Confidence 467899999988 3 22478999 999999999995 333567999999999999998 888899999999988
Q ss_pred ecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHH
Q 015435 156 YDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSV 235 (407)
Q Consensus 156 ~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~ 235 (407)
.+......+.+.+++... .+++.++++ ++++||+|...+. ++|+++|+++|+++|+|++|..+...... ..
T Consensus 72 ~~~~~~~~~~~~~~~~~~-~~~~~~v~~-~~~~~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~~~---~~- 142 (170)
T cd01494 72 DDAGYGGLDVAILEELKA-KPNVALIVI-TPNTTSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPAPG---VL- 142 (170)
T ss_pred CCCCccchhhhhhhhccc-cCceEEEEE-ecCcCCCCeEcCH---HHHHHHHHHcCCEEEEecccccccccccc---cc-
Confidence 432222223334544332 234455544 8999999997764 78888899999999999999887764211 00
Q ss_pred HHHHHcCCcEEEEEecCccccccCCCccee
Q 015435 236 RMFVADGGECLVAQSYAKNMGLYGERVGAL 265 (407)
Q Consensus 236 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 265 (407)
.......+++.|++|.++. .++|++
T Consensus 143 ---~~~~~~d~~~~s~~K~~~~--~~~G~l 167 (170)
T cd01494 143 ---IPEGGADVVTFSLHKNLGG--EGGGVV 167 (170)
T ss_pred ---cccccCCEEEEEcccccCC--CceEEE
Confidence 1223456888999999974 678988
No 321
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.68 E-value=5.5e-15 Score=143.31 Aligned_cols=330 Identities=17% Similarity=0.168 Sum_probs=191.1
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccc--cc-cccCCC-CC---CcHH-HHHHHHHHHhCCCCCCCCCCceE
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ--SR-VKEYLP-IV---GLVD-FNKLSAKLILGADSPAIKDNRVT 102 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~y~~-~~---g~~~-l~~~~a~~~~~~~~~~~~~~~i~ 102 (407)
++-|+|-.+. + ..++.+.+.....+.+.. .. ...|.. .. -+++ .|+.+++++ +. +++++.
T Consensus 34 ~~~l~l~~se----n--~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf-~a-----~~~~~~ 101 (452)
T PTZ00094 34 IEGLELIASE----N--FTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAF-GL-----DPEEWG 101 (452)
T ss_pred HcCeeEeccc----c--cCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHh-CC-----Ccccce
Confidence 6788888664 2 444455555545453111 00 011111 11 1332 456777777 42 235565
Q ss_pred E-eecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhh----------cCceeeEEEeecCCCCCcChhhHHHH
Q 015435 103 T-VQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTL----------AGLSVKTYRYYDPATRGLNFQGLLED 171 (407)
Q Consensus 103 ~-~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~----------~G~~~~~v~~~~~~~~~~d~~~l~~~ 171 (407)
+ ++++||++++.+++ ...+++||+|++....+..+...... .+.++..++.+ . ++.+|++++++.
T Consensus 102 ~~~~~~sgt~an~~v~--~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~-~-~g~id~~~L~~~ 177 (452)
T PTZ00094 102 VNVQPYSGSPANFAVY--TALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVN-E-KGLIDYDKLEEL 177 (452)
T ss_pred eecCCCchHHHHHHHH--HHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccC-C-CCCcCHHHHHHH
Confidence 5 11278999999974 44578999999988777666443321 12334455552 2 378999999999
Q ss_pred HHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEec
Q 015435 172 LRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSY 251 (407)
Q Consensus 172 i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 251 (407)
+.+. +++++++ . ++.+|+..+ +++|.++|+++|+++++|+++...... . +..+. ......++++|.
T Consensus 178 l~~~-~~~lvi~-~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~-~--~~~~~----~~~~~D~l~~S~ 243 (452)
T PTZ00094 178 AKAF-RPKLIIA-G--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVA-A--GVLPS----PFPYADVVTTTT 243 (452)
T ss_pred HHHh-CCCEEEE-e--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhcccc-C--CCCCC----CCCCCcEEEcCC
Confidence 9632 3445544 3 344888554 777778899999999999997543322 1 11100 011345889999
Q ss_pred CccccccCCCcceeEEeecChhhHHHHHHHHhhhhhc-ccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHH
Q 015435 252 AKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRP-MYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQ 330 (407)
Q Consensus 252 sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (407)
+|.++ |.+.|++ ++. ++..+.+.........+ ...+++.....++..+++... ....++.++++.++++
T Consensus 244 hK~l~--GP~Gg~l--~~~-~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~-----~~~~~~~~~~i~~l~~ 313 (452)
T PTZ00094 244 HKSLR--GPRSGLI--FYR-KKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQ-----SPEWKEYAKQVLKNAK 313 (452)
T ss_pred ccCCC--CCCceEE--EEe-cccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHh-----ChhHHHHHHHHHHHHH
Confidence 99774 3333666 454 33333343333222111 112344444444444443221 1234567788899999
Q ss_pred HHHHHHHhcCCCCCcccccC----CceeEEe--cCCCHHHHHHhHhhccEEEcC------------CC-eEEecCC----
Q 015435 331 QLFDALSARGTPGDWSHIIK----QIGMFTF--TGLNSEQVAFMTKEYHIYMTS------------DG-RISMAGL---- 387 (407)
Q Consensus 331 ~l~~~l~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~l~~~gi~~~~------------gg-Ris~~~~---- 387 (407)
++.+.|++.| +.+..+ ....+.+ .+.+.+.+...|+++||.+.. ++ |+++...
T Consensus 314 ~l~~~L~~~g----~~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g 389 (452)
T PTZ00094 314 ALAAALEKRG----YDLVTGGTDNHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRG 389 (452)
T ss_pred HHHHHHHhCC----cEEecCCCCCceEeecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCC
Confidence 9999998776 443321 1111111 144667788888889999942 22 8876432
Q ss_pred -CCCChhHHHHHHHHHHH
Q 015435 388 -SSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 388 -~~e~i~~~~~~l~~~l~ 404 (407)
+++|++++++.|+++++
T Consensus 390 ~~~~di~~l~~~l~~~~~ 407 (452)
T PTZ00094 390 AKEKDFKFVADFLDRAVK 407 (452)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 47999999999999886
No 322
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.68 E-value=4.3e-14 Score=132.88 Aligned_cols=272 Identities=17% Similarity=0.158 Sum_probs=170.9
Q ss_pred CCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChH----HHHhhcCcee
Q 015435 75 VGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHP----KVFTLAGLSV 150 (407)
Q Consensus 75 ~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~----~~~~~~G~~~ 150 (407)
+...+|.+.++++. +. +..+. +++|+.|+.+++ ...+.+||+|+++.+.|.+.. ..+...|+++
T Consensus 64 P~~~~lE~~la~le-g~-------~~av~--~sSG~aAi~~al--~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v 131 (384)
T PRK06434 64 PTVQAFEEKYAVLE-NA-------EHALS--FSSGMGAITSAI--LSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHV 131 (384)
T ss_pred hhHHHHHHHHHHHh-CC-------CcEEE--eCCHHHHHHHHH--HHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEE
Confidence 34677888888887 43 56777 999999999984 555889999999988776665 4556789999
Q ss_pred eEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCc
Q 015435 151 KTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDA 230 (407)
Q Consensus 151 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~ 230 (407)
+.++.++.+. ++ +. .++++++++ ..|.|||+.+ .|+++|+++|++++ +++|.++......
T Consensus 132 ~fvd~~~~~~--~~-------l~-~~~tklv~~-e~~snpt~~v---~Di~~I~~la~~~~--lvVD~t~~s~~~~---- 191 (384)
T PRK06434 132 DYIDTDRLNS--LD-------FD-PSNYDLIYA-ESITNPTLKV---PDIKNVSSFCHEND--VIVDATFASPYNQ---- 191 (384)
T ss_pred EEECCCChhh--ee-------ec-CCCeeEEEE-EcCCCCCcee---ecHHHHHHHHHHcC--eEEECCCCCcccC----
Confidence 9998732222 22 12 124677767 8899999985 47999999999998 4569996422211
Q ss_pred hhHHHHHHHHcCCcEEEEEecCccccccCCCc-ceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChh
Q 015435 231 DAQSVRMFVADGGECLVAQSYAKNMGLYGERV-GALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDST 309 (407)
Q Consensus 231 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 309 (407)
.++ . ....++++|.+|.++.+|--+ |.+ ++.++++.++++. .........+.........-|+
T Consensus 192 --~pl----~-~gaDivv~S~tK~i~G~~d~~gG~v--v~~~~~~~~~~~~----~~~~~G~~~~~~~A~l~~~gL~--- 255 (384)
T PRK06434 192 --NPL----D-LGADVVIHSATKYISGHSDVVMGVA--GTNNKSIFNNLVE----RRKTLGSNPDPIQAYLALRGLK--- 255 (384)
T ss_pred --Cch----h-cCCCEEEeecccccCCCCCceEEEE--ecCcHHHHHHHHH----HHHhcCCCCCHHHHHHHHhCCC---
Confidence 111 1 235688899999997655333 445 5666665554432 2112222334433333333333
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc---------ccCCceeEEecCCCHHHHHHhHhhccEEE-cC-
Q 015435 310 MYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSH---------IIKQIGMFTFTGLNSEQVAFMTKEYHIYM-TS- 378 (407)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~~gi~~-~~- 378 (407)
.++.+.++..++...+.+.|+..+.-..+.+ ....||++.+.--+.+.+.++++...+.. .+
T Consensus 256 -------tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l~l~~~~~s 328 (384)
T PRK06434 256 -------TLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRSMEDVHKFIRNLEIPMVAAS 328 (384)
T ss_pred -------cHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECCHHHHHHHHHhCCcceEccC
Confidence 2456667777888888888887652000000 11246666654114555666666544432 11
Q ss_pred -C-------------------------C------eEEecCCCCCChhHHHHHHHHHHH
Q 015435 379 -D-------------------------G------RISMAGLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 379 -g-------------------------g------Ris~~~~~~e~i~~~~~~l~~~l~ 404 (407)
| | |||++- |+.+.+++-|.++|+
T Consensus 329 lG~~~sl~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGl---Ed~~dLi~dl~~Al~ 383 (384)
T PRK06434 329 LGGVESLITLPVETSHSSLSPEERERLGISDNLVRFSIGI---EDIDDLIKDIENALS 383 (384)
T ss_pred CCCCCeeeECCCccccccCCHHHHHhcCCCcCeEEEEeCc---CCHHHHHHHHHHHhc
Confidence 1 1 888873 889999999999875
No 323
>PLN02271 serine hydroxymethyltransferase
Probab=99.67 E-value=5e-14 Score=134.37 Aligned_cols=270 Identities=19% Similarity=0.177 Sum_probs=168.6
Q ss_pred eecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHH---------hhcCceeeEEE--eecCCCCCcChhhHHHHH
Q 015435 104 VQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVF---------TLAGLSVKTYR--YYDPATRGLNFQGLLEDL 172 (407)
Q Consensus 104 ~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~---------~~~G~~~~~v~--~~~~~~~~~d~~~l~~~i 172 (407)
++..||+.|+.++ +...+.|||+|+..+..+.++.... ...|..+..++ + ++.++.+|.+++++..
T Consensus 218 VQp~SGs~AN~aV--~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~-d~~~g~IDyd~lek~a 294 (586)
T PLN02271 218 VQPYSCTSANFAV--YTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKV-NPQTGYIDYDKLEEKA 294 (586)
T ss_pred eeeccHHHHHHHH--HHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEccc-ccccCccCHHHHHHHh
Confidence 3356888999888 4666899999999988777775532 33454444444 5 3456789999999955
Q ss_pred HcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccc-cccCCCCCchhHHHHHHHHcCCcEEEEEec
Q 015435 173 RAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQ-GFASGSLDADAQSVRMFVADGGECLVAQSY 251 (407)
Q Consensus 173 ~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 251 (407)
.. .++++|++ ..-.||. .-++++|+++|+++|+++++|.++. ++...+..+ + +.....++.+|.
T Consensus 295 ~~-~rPKLII~-g~Saypr-----~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~---s-----P~~~aDvvt~TT 359 (586)
T PLN02271 295 LD-FRPKILIC-GGSSYPR-----EWDYARFRQIADKCGAVLMCDMAHISGLVAAKECV---N-----PFDYCDIVTSTT 359 (586)
T ss_pred hh-cCCeEEEE-CchhccC-----cCCHHHHHHHHHHcCCEEEEECcccccccccCcCC---C-----CCcCCcEEEeCC
Confidence 42 45566555 5556773 2367888888999999999999974 444332100 0 111245888999
Q ss_pred CccccccCCCcceeEEeecCh---------------hhHHHHHHHHhhhhhcccCCCChhHHH-HHHHHhcChhhHHhHH
Q 015435 252 AKNMGLYGERVGALSIVCKTE---------------DVASRVESQLKLVIRPMYSSPPIHGAS-IVATILKDSTMYKEWT 315 (407)
Q Consensus 252 sK~~~~~G~r~G~~~~v~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~ 315 (407)
+|++ .|-|-|.+ ++.+. +....+.+++.....+...+.+..... +....+.... .
T Consensus 360 HKtL--rGPrGG~I--~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~-----~ 430 (586)
T PLN02271 360 HKSL--RGPRGGII--FYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVA-----T 430 (586)
T ss_pred cccC--CCCCceEE--EecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHh-----C
Confidence 9986 56776777 45421 011124444444443332233322222 2222232110 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCc-eeEEec-----CCCHHHHHHhHhhccEEEcC-----------
Q 015435 316 LELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQI-GMFTFT-----GLNSEQVAFMTKEYHIYMTS----------- 378 (407)
Q Consensus 316 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~l~~~gi~~~~----------- 378 (407)
...++..+++.+|.+.|.+.|.+.| +.+..... +-.+++ +++...+.+.|++.||.+..
T Consensus 431 ~efk~Ya~QVv~NAkaLA~~L~~~G----~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~ 506 (586)
T PLN02271 431 PEYKAYMQQVKKNAQALASALLRRK----CRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTIS 506 (586)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHCC----CeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCC
Confidence 2235666778889999999999988 55543222 222344 34678899999999998843
Q ss_pred -CC-eEEec-----CCCCCChhHHHHHHHHHHH
Q 015435 379 -DG-RISMA-----GLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 379 -gg-Ris~~-----~~~~e~i~~~~~~l~~~l~ 404 (407)
+| ||... +..++|++++.+.|.++++
T Consensus 507 psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 507 PGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 34 88532 2567889998888888775
No 324
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.67 E-value=1.4e-14 Score=124.33 Aligned_cols=326 Identities=15% Similarity=0.136 Sum_probs=197.2
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCC----cHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVG----LVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g----~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
...++||+.+.+ .|....++++++...++.+-.....+-.-..| +..|...+|++- ++ ++.++
T Consensus 66 ~k~ilnFcaNnY---LGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh-~r-------ED~il-- 132 (417)
T KOG1359|consen 66 DKKILNFCANNY---LGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFH-GR-------EDTIL-- 132 (417)
T ss_pred ccceeeeccccc---ccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHh-CC-------CceEE--
Confidence 468999998887 67666778888888777621100110001223 455566677755 43 66777
Q ss_pred cCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCC-CcEEEEe
Q 015435 106 CLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPS-GAIVLLH 184 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~-~~~v~i~ 184 (407)
.+++-.|+..++ -..+.|.|.|+-....+.+..+.++.+. .+ .-+|+..++..+.+..+ +..++++
T Consensus 133 ypscfdANag~f--eail~pedAvfSDeLNhASIIdGirLck----ry-------~h~dv~~l~~~l~~a~k~r~klv~T 199 (417)
T KOG1359|consen 133 YPSCFDANAGAF--EAILTPEDAVFSDELNHASIIDGIRLCK----RY-------RHVDVFDLEHCLISACKMRLKLVVT 199 (417)
T ss_pred eccccccchHHH--HHhcChhhhhhccccccchhhhhhHHHh----hh-------ccchhHHHHHHHHHhhhheEEEEEe
Confidence 777777776663 4447788888888888888888877763 11 22566677766553322 3334443
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcce
Q 015435 185 ACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGA 264 (407)
Q Consensus 185 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 264 (407)
...-.-.|- ...+++|+++++|||.++++||+++.+.++.- ..-.-..+.-+++..++..+++|++| |---||
T Consensus 200 Dg~FSMDGd---iaPl~ei~~La~kYgaLlfiDecHaTgf~G~t--GrGt~E~~~vm~~vdiinsTLgKAlG--ga~GGy 272 (417)
T KOG1359|consen 200 DGVFSMDGD---IAPLEEISQLAKKYGALLFIDECHATGFFGET--GRGTAEEFGVMGDVDIINSTLGKALG--GASGGY 272 (417)
T ss_pred cceeccCCC---cccHHHHHHHHHhcCcEEEEeecccceeecCC--CCChHHHhCCCCcceehhhhhhhhhc--CCCCCC
Confidence 333344555 44588899999999999999999987766531 11122233445678899999999987 334488
Q ss_pred eEEeecChhhHHHHHHHHhhhhhcccCCCChhH-HHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 015435 265 LSIVCKTEDVASRVESQLKLVIRPMYSSPPIHG-ASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPG 343 (407)
Q Consensus 265 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 343 (407)
. +.+..+..-+..+-+.+. ++++-+++ ...+.++++.. -.-.+..++.+.+.+.+++.++..|
T Consensus 273 t---tgp~~li~llrqr~Rpyl---FSnslppavV~~a~ka~dll-------m~s~~~i~~~~a~~qrfr~~me~aG--- 336 (417)
T KOG1359|consen 273 T---TGPKPLISLLRQRSRPYL---FSNSLPPAVVGMAAKAYDLL-------MVSSKEIQSRQANTQRFREFMEAAG--- 336 (417)
T ss_pred c---cCChhHHHHHHhcCCcee---ecCCCChhhhhhhHHHHHHH-------HhhHHHHHHHHHHHHHHHHHHHhcC---
Confidence 8 454444443333333222 22222211 22222223211 0122444566778888888888877
Q ss_pred CcccccCCceeEEe-cC---CCHHHHHHhHhhccEEEcC-------CC----eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 344 DWSHIIKQIGMFTF-TG---LNSEQVAFMTKEYHIYMTS-------DG----RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 344 ~~~~~~~~~~~~~~-~~---~~~~~~~~~l~~~gi~~~~-------gg----Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
+.+......+... ++ +.....+++|+ .||.+.. -| |+.++. +++|+++++++++.++.+-+
T Consensus 337 -ftIsg~~hPI~pv~lGda~lA~~~ad~lLk-~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~ 413 (417)
T KOG1359|consen 337 -FTISGASHPICPVMLGDARLASKMADELLK-RGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFL 413 (417)
T ss_pred -ceecCCCCCccceecccHHHHHHHHHHHHh-cCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhh
Confidence 5554422222222 22 24455677777 7988753 24 655554 58999999999999987654
No 325
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.67 E-value=2.4e-14 Score=137.36 Aligned_cols=344 Identities=10% Similarity=0.053 Sum_probs=193.5
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHH-HhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEee
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQL-LVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQ 105 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~ 105 (407)
...++.+||+..|....+.| ..++.+++++.++ ..........| ......++.+.+++.+...-. -.-+.+++
T Consensus 54 D~dG~~ylD~~sg~~~~~lG-h~~p~i~~Ai~~q~~~~~l~~~~~~-~~~~~~~la~~l~~~l~~~~p--~~~~~v~f-- 127 (464)
T TIGR00699 54 DVDGNRLLDLYSQISSIPIG-YNNPALLKAAQSPEMATTLINRPAL-GNFPSKDWAKILKEGILKVAP--KGQDQVWT-- 127 (464)
T ss_pred eCCCCEEEEccCCHhhhcCC-CCCHHHHHHHHHHHHHHhhcccccC-CcHHHHHHHHHHHHhHHhhCC--CCcCEEEE--
Confidence 45678999999998766677 6677888888764 22011111122 112233455555442211111 01268999
Q ss_pred cCCcccHHHHHHHHHHhhc------------------------CC---CeEEecCCCCCChHHHHhhc-Cc---------
Q 015435 106 CLSGTGSLRVGAEFLARHY------------------------HQ---LTIYIPQPTWGNHPKVFTLA-GL--------- 148 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~------------------------~g---d~Vi~~~p~y~~~~~~~~~~-G~--------- 148 (407)
++||++|++.++++..... .| .+|+....+|++........ |.
T Consensus 128 ~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~ 207 (464)
T TIGR00699 128 GMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIP 207 (464)
T ss_pred eCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCC
Confidence 9999999999998886541 11 26999999888775543321 11
Q ss_pred --eeeEEEeecCC-CC-----------CcChhhHHHHHHcCC-CCcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHHcCc
Q 015435 149 --SVKTYRYYDPA-TR-----------GLNFQGLLEDLRAAP-SGAIVLLHACAHNPTGVDP-TLEQWEQIRQLMRSKGL 212 (407)
Q Consensus 149 --~~~~v~~~~~~-~~-----------~~d~~~l~~~i~~~~-~~~~v~i~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~ 212 (407)
.+..+|..... .. .-+++.+++.+.+.+ +..++++ -......|.+. +++.+++|.++|++||+
T Consensus 208 ~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~-EPv~g~~G~~~~~~~yl~~lr~lc~~~g~ 286 (464)
T TIGR00699 208 AFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIV-EPIQSEGGDNHASPDFFRKLRDITKKHNV 286 (464)
T ss_pred CCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEE-eCCCCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 11112221000 00 013556777776432 3455555 33444457664 79999999999999999
Q ss_pred eeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCC
Q 015435 213 LPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSS 292 (407)
Q Consensus 213 ~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 292 (407)
++|+||+..+|...+ ..+....+.-.....+ .+++|.++..| ++ +.. +.+ ..........+++
T Consensus 287 lLI~DEV~tGfGrtG---~~fa~e~~gv~~~PDi--~t~gK~lg~gG----~~--~~~-----~~~-~~~~~~~~~~T~~ 349 (464)
T TIGR00699 287 AFIVDEVQTGVGATG---KFWAHEHWNLDDPPDM--VTFSKKFQTAG----YF--FHD-----PAF-RPNKPYRQFNTWM 349 (464)
T ss_pred EEEEeeeeeCCCCCc---chhHHHhcCCCCCCCE--EEehhhhccCC----cc--ccc-----hhc-cCCCCcccccCCC
Confidence 999999999887654 2333333211101222 34799885334 33 233 111 1111112233556
Q ss_pred CChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCCccccc--CCceeEEecCC-C---HHH
Q 015435 293 PPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARG--TPGDWSHII--KQIGMFTFTGL-N---SEQ 364 (407)
Q Consensus 293 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~--~~~~~~~~~~~-~---~~~ 364 (407)
.+++++.++.+.|+... -+.+.++.+++.+++.+.|+++. .+..+..+. ..|.++. +.+ + ...
T Consensus 350 gnp~~~aaa~a~L~~l~--------~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~g-ie~~~~~~~~~ 420 (464)
T TIGR00699 350 GDPSRALILREIIQEIK--------RKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIA-WDTPDEAKRDK 420 (464)
T ss_pred CCHHHHHHHHHHHHHHH--------hcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEE-EecCCHHHHHH
Confidence 77778888776665321 12344566666677777776652 110122222 3343333 333 2 223
Q ss_pred HHHhHhhccEEEcCCC----eEEecC-CCCCChhHHHHHHHHHH
Q 015435 365 VAFMTKEYHIYMTSDG----RISMAG-LSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 365 ~~~~l~~~gi~~~~gg----Ris~~~-~~~e~i~~~~~~l~~~l 403 (407)
+.+.+.++|+.+.+.| ||...- +++++++.++++|.+++
T Consensus 421 i~~~~~~~Gvl~~~~g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 421 LLKKARNNGVNIGGCGVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred HHHHHHHCCcEEecCCCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 4444555899998865 665442 58899999999998764
No 326
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.67 E-value=5.1e-16 Score=137.17 Aligned_cols=283 Identities=14% Similarity=0.108 Sum_probs=172.4
Q ss_pred cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhh--cCC--CeEEecCCCCCChHHHHhhcCceeeE
Q 015435 77 LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARH--YHQ--LTIYIPQPTWGNHPKVFTLAGLSVKT 152 (407)
Q Consensus 77 ~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~--~~g--d~Vi~~~p~y~~~~~~~~~~G~~~~~ 152 (407)
.++|.+.|.++-.-.+++..+...|++ ..|+|+.+.++.-.++-. ..+ -.|+...|.|+.|......+.-..-.
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~--GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~ 122 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVF--GTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYK 122 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEE--ECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEE
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEE--cCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcc
Confidence 677778888777555666666788999 999999999985444333 222 25888899999999887765443333
Q ss_pred EEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchh
Q 015435 153 YRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADA 232 (407)
Q Consensus 153 v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~ 232 (407)
+.- |...+. ........|=++++||||.|.+ .+.+ ++.-+..+|.|-||..-.+.++
T Consensus 123 w~G-da~~~~----------~~~~~~~~IElVTSPNNPDG~l-----r~~V---~~g~~~k~I~D~AYYWPhyTpI---- 179 (363)
T PF04864_consen 123 WAG-DASNFK----------NSDNPSPYIELVTSPNNPDGQL-----REAV---LNGSSGKVIHDLAYYWPHYTPI---- 179 (363)
T ss_dssp EEE-ECCCGT----------T-S-CCGEEEEEESS-TTT-----------S---STTTEEEEEEE-TT-STTTS------
T ss_pred ccc-cHHhhc----------cCCCCCCeEEEEeCCCCCcccc-----cchh---cCCCCcceeeeeeeeccccccc----
Confidence 332 122111 1112456777779999999994 2222 3445677899999987777643
Q ss_pred HHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHH
Q 015435 233 QSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYK 312 (407)
Q Consensus 233 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 312 (407)
....+..|.++|+||.-|-+|-|+||. +++|++++.++.. +....+.+++.-.|.-++++|+.. .+
T Consensus 180 ------~~~aD~DiMLFT~SK~TGHAGSR~GWA--lVKD~~Va~kM~~----y~~lnTiGvS~dsQLRa~kiLk~v--~~ 245 (363)
T PF04864_consen 180 ------TAPADHDIMLFTLSKLTGHAGSRFGWA--LVKDEEVAKKMTK----YMELNTIGVSRDSQLRALKILKVV--LD 245 (363)
T ss_dssp -------S-B--SEEEEEHHHHCS-GGG-EEEE--EES-HHHHHHHHH----HHHHHCSS--HHHHHHHHHHHHHH--HH
T ss_pred ------CCCCCCceEEEEEecccCcccccccee--eecCHHHHHHHHH----HHHHhcccCcHHHHHHHHHHHHHH--Hh
Confidence 233577899999999999999999999 7998776665544 445556789999999888887631 11
Q ss_pred hHH------HHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC-------------CceeEEecCCCH---HHHHHhHh
Q 015435 313 EWT------LELKAMADRIISMRQQLFDALSARGTPGDWSHIIK-------------QIGMFTFTGLNS---EQVAFMTK 370 (407)
Q Consensus 313 ~~~------~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-------------~~~~~~~~~~~~---~~~~~~l~ 370 (407)
.+. +...--++.++++.+.|.+.+...+. +....- ...-|.|++... +.+...|+
T Consensus 246 ~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~r---FSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed~DC~~~l~ 322 (363)
T PF04864_consen 246 GYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKR---FSLQKFSPQYCNFFKRVREPSPAFAWLKCEREEDEDCYAVLR 322 (363)
T ss_dssp HCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSS---EEE---SCEEETTTTCEEE---SEEEEEESSCGGSSHHHHHH
T ss_pred cccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCc---eecCcCCchhccccccccCCCCCeEEEecCCcccccHHHHHH
Confidence 100 12334456667777788887776543 332211 244577775432 35888889
Q ss_pred hccEEEcCCC---------eEEecCCCCCChhHHHHHHHHH
Q 015435 371 EYHIYMTSDG---------RISMAGLSSKTVPHLTDAIHAA 402 (407)
Q Consensus 371 ~~gi~~~~gg---------Ris~~~~~~e~i~~~~~~l~~~ 402 (407)
++||..+.|. |||+.. ++++++.++++|..+
T Consensus 323 ~~~I~tr~G~~fga~~ryVRlSml~-~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 323 EAKIITRSGVLFGADSRYVRLSMLK-RDDDFDQLLERLSKL 362 (363)
T ss_dssp CTTEEEEEGGGGTS-TTEEEEESSS--HHHHHHHHHHHHCC
T ss_pred hCCcccCCCCccCCCCCeEEEeccC-CHHHHHHHHHHHHhh
Confidence 9999998873 999997 889999999999754
No 327
>PLN03032 serine decarboxylase; Provisional
Probab=99.66 E-value=2.7e-14 Score=133.31 Aligned_cols=288 Identities=12% Similarity=0.085 Sum_probs=174.8
Q ss_pred cHHHHHHHHHHHhCCCCCCCCCCce--EEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEE
Q 015435 77 LVDFNKLSAKLILGADSPAIKDNRV--TTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYR 154 (407)
Q Consensus 77 ~~~l~~~~a~~~~~~~~~~~~~~~i--~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~ 154 (407)
..+.++.+++++ +. +++++ ++ |+|||+++..++...+...++..|+++.-.|.+..++++.+|.+++.+|
T Consensus 68 e~~v~~~ia~ll-g~-----~~~~~~G~f--TsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~ 139 (374)
T PLN03032 68 EVGVLDWFARLW-EL-----EKDEYWGYI--TTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVP 139 (374)
T ss_pred HHHHHHHHHHHh-CC-----CCccCCEEE--eCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEee
Confidence 344455555555 32 23566 88 9999999988854333333556899999999999999999999999999
Q ss_pred eecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC-----ceeeeccccccccCCCCC
Q 015435 155 YYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKG-----LLPFFDSAYQGFASGSLD 229 (407)
Q Consensus 155 ~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~-----~~li~D~~y~~~~~~~~~ 229 (407)
. +.++.+|+++|++.+.+....+.+++.+..+|+||.+ +++++|+++|+++| +++.+|.++..+... ..
T Consensus 140 ~--d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~i---dpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p-~~ 213 (374)
T PLN03032 140 T--LPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAV---DDLDRILRILKELGYTEDRFYIHCDGALFGLMMP-FV 213 (374)
T ss_pred e--CCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccC---CCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhh-cc
Confidence 8 3457899999999998432234445547789999995 67888899999996 589999998654321 00
Q ss_pred chhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhh-hcccCCCChhH-----HHHHHH
Q 015435 230 ADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVI-RPMYSSPPIHG-----ASIVAT 303 (407)
Q Consensus 230 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~ 303 (407)
.....+ .+. .....+..|.+|.++.| ..+|.+ +.+++ ..+.+........ ...+...+..+ ..++..
T Consensus 214 ~~~~~~-~~~--~~vDSis~s~HK~~g~P-~g~G~l--l~r~~-~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~ 286 (374)
T PLN03032 214 SRAPEV-TFR--KPIGSVSVSGHKFLGCP-MPCGVA--LTRKK-HVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLR 286 (374)
T ss_pred CCCccc-CCC--cCCcEEEECcccccCCC-cCeEEE--EEEch-hhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHH
Confidence 000000 011 12345677899987733 557888 57642 2222111000000 00111222222 222222
Q ss_pred HhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCCCHHHHHHhHhhccEEEcCC--C-
Q 015435 304 ILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSD--G- 380 (407)
Q Consensus 304 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~g--g- 380 (407)
.+. .+.+.+..++..++.+++.+.|++.+. ..+..|......|..-..+. + . +|..+.+- .
T Consensus 287 ~~G--------~~g~~~~~~~~~~~a~~l~~~l~~~~~---~~~~~p~~~~V~f~~~~~~~---~-~-~~w~l~~~~~~~ 350 (374)
T PLN03032 287 RKG--------YRGIKRDVQHCMRNAHYLKDRLTEAGL---TCRLNELSSTVVFERPMDEA---F-I-KKWQLACEGDIA 350 (374)
T ss_pred HhC--------HHHHHHHHHHHHHHHHHHHHHHHhCCC---cEEECCCceEEEEcCCCcHh---H-h-heeeecccCCEE
Confidence 222 145677778888899999999998873 22445555555554333221 1 1 24444433 3
Q ss_pred eEEecC-CCCCChhHHHHHHHH
Q 015435 381 RISMAG-LSSKTVPHLTDAIHA 401 (407)
Q Consensus 381 Ris~~~-~~~e~i~~~~~~l~~ 401 (407)
||.+.. ++++.++++++.|++
T Consensus 351 hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 351 HVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred EEEECCCCCHHHHHHHHHHHhc
Confidence 887654 566777777777654
No 328
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.66 E-value=3.8e-14 Score=132.38 Aligned_cols=309 Identities=17% Similarity=0.126 Sum_probs=188.1
Q ss_pred ccchhHHHHHHHHhcccc-ccc-----cCCCC--CCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCC-cccHHHHHHHH
Q 015435 49 LVLNVVRKAEQLLVNDQS-RVK-----EYLPI--VGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLS-GTGSLRVGAEF 119 (407)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~-~~~-----~y~~~--~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g-~t~a~~~~~~~ 119 (407)
.|.++++++.+.+....+ ... ++.+. .-+.+.++.+++++ +.. +..++++ ++| ||++++++ +
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~-~~~----~~~~v~~--~~gsgT~a~ea~--~ 73 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELL-NIP----DNYEVLF--LQGGATGQFAAV--P 73 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHh-CCC----CCceEEE--EcCCchHHHHHH--H
Confidence 466777777777752111 111 11110 12556677777776 421 1246777 766 99999999 4
Q ss_pred HHhhcCCCeEEecCCCCCC--hHHHHhhcCceeeEEEee--cCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCC
Q 015435 120 LARHYHQLTIYIPQPTWGN--HPKVFTLAGLSVKTYRYY--DPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDP 195 (407)
Q Consensus 120 ~~~~~~gd~Vi~~~p~y~~--~~~~~~~~G~~~~~v~~~--~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~ 195 (407)
...+.+||++++...+..+ +.++++..|. +..+... .+++..+++++++. . ++.+.+.+ ++..|.||+..
T Consensus 74 ~nl~~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~v~~-th~ETstGv~~ 147 (349)
T TIGR01364 74 LNLLAEGKVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWEI--S--EDAAYVHY-CANETIHGVEF 147 (349)
T ss_pred HhcCCCCCeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcCC--C--CCCCEEEE-cCCCCcccEec
Confidence 5557789998887765543 3557778888 7777652 12334566665552 2 45677777 67788999965
Q ss_pred CHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhH
Q 015435 196 TLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVA 275 (407)
Q Consensus 196 ~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~ 275 (407)
+ ++++.+++++++|.+.+ ++..+. .+.. .+ +++.|..|.+|.+| +|.+ ..+ ++..
T Consensus 148 ~--------~l~~~~~~l~iVDavss-~g~~~i-----d~~~----~d--~~~~ssqK~lgP~G--lg~l--~~s-~~~~ 202 (349)
T TIGR01364 148 R--------ELPDVKNAPLVADMSSN-ILSRPI-----DVSK----FG--LIYAGAQKNIGPAG--LTVV--IVR-KDLL 202 (349)
T ss_pred c--------eecccCCCeEEEEcccc-ccCccC-----CHHH----cc--EEEEecccccCCCc--eEEE--EEC-HHHH
Confidence 4 55777899999999854 333222 1111 12 88889999999777 5666 344 4443
Q ss_pred HHHHHHH------hhhh--hcccCCCChhHHHHHHHHhcChhhHHhHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 015435 276 SRVESQL------KLVI--RPMYSSPPIHGASIVATILKDSTMYKEWTL-ELKAMADRIISMRQQLFDALSARGTPGDWS 346 (407)
Q Consensus 276 ~~~~~~~------~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 346 (407)
+++.... .... .....+++.....++..+++-.. .. .++++.++.+++++++++.|++++. +.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~-----~~gG~e~i~~r~~~l~~~l~~~l~~~~g---l~ 274 (349)
T TIGR01364 203 GRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLK-----EQGGVKAIEKRNQAKAQLLYDTIDNSNG---FY 274 (349)
T ss_pred hhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHH-----HcCCHHHHHHHHHHHHHHHHHHHHhCCC---ee
Confidence 3321111 0000 11223666666666666665321 12 3788999999999999999999852 21
Q ss_pred -c-ccC--Cc-eeEEec--CCC-HHHHHHhHhhccEEEcCC----C--eEEecC-CCCCChhHHHHHHHHHHHh
Q 015435 347 -H-IIK--QI-GMFTFT--GLN-SEQVAFMTKEYHIYMTSD----G--RISMAG-LSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 347 -~-~~~--~~-~~~~~~--~~~-~~~~~~~l~~~gi~~~~g----g--Ris~~~-~~~e~i~~~~~~l~~~l~~ 405 (407)
. ..+ .. ....+. +.. .+.....+.++|+++.++ | |+|+.. .++||+++++++|++++++
T Consensus 275 ~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 275 RNPVDPRNRSRMNVVFTLGNEELEKRFLKEAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred ccCCCHHHcCCeEEEEecCChhHhHHHHHHHHHCCCcccCCccccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 1 111 22 223332 221 123334556689977666 3 999865 5789999999999998765
No 329
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.65 E-value=4.9e-14 Score=119.70 Aligned_cols=290 Identities=17% Similarity=0.136 Sum_probs=183.5
Q ss_pred cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEee
Q 015435 77 LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYY 156 (407)
Q Consensus 77 ~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~ 156 (407)
+..+.+.+++++ +. +.+-+ |+|+.++-.++ ..+.+.+||.|++...++....-+++.+|.++..||..
T Consensus 63 I~~F~~dlaeFl-g~-------D~~R~--t~GARe~Kfav--Mhal~~~gd~vV~D~~aHYttyvAAEragl~v~eVp~t 130 (382)
T COG1103 63 IKDFLEDLAEFL-GM-------DEVRV--TAGAREAKFAV--MHALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNT 130 (382)
T ss_pred HHHHHHHHHHHh-CC-------ceeee--cccchhhHHHH--HHHhccCCCEEEEcCcchHHHHHHHHhcCCeEEecCCC
Confidence 667888899988 64 77888 99999999998 45568899999999988777778889999999999987
Q ss_pred cCCCCCcChhhHHHHHHcC----CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchh
Q 015435 157 DPATRGLNFQGLLEDLRAA----PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADA 232 (407)
Q Consensus 157 ~~~~~~~d~~~l~~~i~~~----~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~ 232 (407)
....+.++++...+.+++. ...+.+.++.+ |.|..-+..|.++++++|+++|+.++...+|....-.
T Consensus 131 g~Pey~i~~e~y~~viee~~~~~g~~~~lallTh---~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmp------ 201 (382)
T COG1103 131 GYPEYKITPEGYAEVIEEVKDEGGDPPALALLTH---VDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMP------ 201 (382)
T ss_pred CCCceEecHHHHHHHHHHHHhccCCCceEEEEec---cCCCcCCchhhHHHHHHHHHcCCceEeecceeecccc------
Confidence 6667889999888877642 12344444444 5566666889999999999999999999999643321
Q ss_pred HHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhh-h--hhcccCCCChhHHHHHHHHhcChh
Q 015435 233 QSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKL-V--IRPMYSSPPIHGASIVATILKDST 309 (407)
Q Consensus 233 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~l~~~~ 309 (407)
.+ .......++++|-.|.+... -++|.+ +-..+..+.+...-.. + ......++...+.-++..+-+-+.
T Consensus 202 vs----~ke~g~DFiVgSGHKsmAAs-~PiGvl---~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~ 273 (382)
T COG1103 202 VS----GKEIGADFIVGSGHKSMAAS-APIGVL---AMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPH 273 (382)
T ss_pred cc----ccccCCCEEEecCccchhcc-CCeeEE---eehhHHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHH
Confidence 11 12234568899999999854 468888 4556655554443311 1 001111221212211111111222
Q ss_pred hH---HhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc---cCCceeEEe--cCC---------CHHHHHHhHhhc
Q 015435 310 MY---KEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHI---IKQIGMFTF--TGL---------NSEQVAFMTKEY 372 (407)
Q Consensus 310 ~~---~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~---~~~~~~~~~--~~~---------~~~~~~~~l~~~ 372 (407)
.+ .+|.+.+ ++..++.+.|+++|. +... +.+..+..| ..+ ..=++...|+++
T Consensus 274 V~eRVkrWdeEv--------~kaR~fv~elEkigg---~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~R 342 (382)
T COG1103 274 VVERVKRWDEEV--------EKARWFVAELEKIGG---VKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKR 342 (382)
T ss_pred HHHHHHHHHHHH--------HHHHHHHHHHHHhhh---HHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHhc
Confidence 22 2233333 334455555555542 1111 111111111 111 111355667778
Q ss_pred cEEEcCCC-----eEEecCCCCCChhHHHHHHHHHHHhh
Q 015435 373 HIYMTSDG-----RISMAGLSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 373 gi~~~~gg-----Ris~~~~~~e~i~~~~~~l~~~l~~~ 406 (407)
||.-...| .+|+.+++.|+++..++++++++++.
T Consensus 343 gI~GI~~G~Tk~~K~svyGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 343 GIHGIQPGQTKYFKLSVYGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred CccccccCceeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 88655444 67877789999999999999998864
No 330
>PRK04311 selenocysteine synthase; Provisional
Probab=99.65 E-value=1.5e-13 Score=131.96 Aligned_cols=339 Identities=16% Similarity=0.132 Sum_probs=193.4
Q ss_pred CCCeeeeeeeeeecCCCccc-cchhHHHHHHHHhccccccccCCCC---CC--cHHHHHHHHHHHhCCCCCCCCCCceEE
Q 015435 30 SPVKLNLGVGAYRTEEGKPL-VLNVVRKAEQLLVNDQSRVKEYLPI---VG--LVDFNKLSAKLILGADSPAIKDNRVTT 103 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~y~~~---~g--~~~l~~~~a~~~~~~~~~~~~~~~i~~ 103 (407)
-+.+||.+.-+..+|.|.+. +.++++++.+.+. .. ....|... .| +..+++.+++++ +. ++.++
T Consensus 78 lr~vinatg~v~~tNlg~s~l~~~v~eav~~~~~-~~-~~le~~l~~g~~g~r~~~~e~~lA~l~-Ga-------e~a~v 147 (464)
T PRK04311 78 LRPVINATGVVLHTNLGRALLSEAAIEAVTEAAR-GY-SNLEYDLATGKRGSRDRALAALLCALT-GA-------EDALV 147 (464)
T ss_pred CcceecCCccEEeccCCCCCCCHHHHHHHHHHHh-cc-cccccchhhcccchHHHHHHHHHHHHh-CC-------CeEEE
Confidence 37889987667777777555 4455555555554 11 11122211 12 467888898877 53 56777
Q ss_pred eecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCC------hHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCC
Q 015435 104 VQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGN------HPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPS 177 (407)
Q Consensus 104 ~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~------~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 177 (407)
+++++.|+.+++ ..+.+||+|++++..+.. ....++..|++++.++.. ...++++++++++ ++
T Consensus 148 --v~sgtaAl~l~l---~~l~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~----~~t~~~dle~aI~--~~ 216 (464)
T PRK04311 148 --VNNNAAAVLLAL---NALAAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTT----NRTHLRDYEQAIN--EN 216 (464)
T ss_pred --ECCHHHHHHHHH---HHhCCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCC----CCCCHHHHHHhcC--cc
Confidence 899999998873 446799999999864331 234567889999999762 2357899999997 66
Q ss_pred CcEEEEecCCCCCC--CCCCCHHHHHHHHHHHHHcCceeeeccccccccCC---CCCchhHHHHHHHHcCCcEEEEEecC
Q 015435 178 GAIVLLHACAHNPT--GVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASG---SLDADAQSVRMFVADGGECLVAQSYA 252 (407)
Q Consensus 178 ~~~v~i~~~p~NPt--G~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~s~s 252 (407)
++++++ .+++||+ |.. ..-++++|+++|++||+++|+|.+...+... +.. ....+..... .+..++++|.+
T Consensus 217 TklV~~-vh~sN~~i~G~~-~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~-~~p~~~~~l~-~GaDiv~fSg~ 292 (464)
T PRK04311 217 TALLLK-VHTSNYRIEGFT-KEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLP-DEPTVQELLA-AGVDLVTFSGD 292 (464)
T ss_pred CeEEEE-EcCCCccccccC-CcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCC-CCCchhhHHh-cCCcEEEecCc
Confidence 888777 7889984 532 1346999999999999999999964322100 000 0011111111 34568999999
Q ss_pred ccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhc---ChhhHHhHH-----HHHHHHHHH
Q 015435 253 KNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILK---DSTMYKEWT-----LELKAMADR 324 (407)
Q Consensus 253 K~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~-----~~~~~~~~~ 324 (407)
|.+|.| ..|++ +++ +++.+++... ...+.. ........+....+. ++. +.|. +.+....++
T Consensus 293 K~LgGp--~~G~i--~g~-~~li~~l~~~--~~~r~l--r~dk~~l~~l~~~l~~~~~~~--~~~~~i~~l~~l~~~~~~ 361 (464)
T PRK04311 293 KLLGGP--QAGII--VGK-KELIARLKKH--PLKRAL--RVDKLTLAALEATLRLYLDPE--KLAEEIPTLRLLTRSPEE 361 (464)
T ss_pred ccccCC--ceEEE--EEc-HHHHHHHhhc--hhHHHH--hcchHHHHHHHHHHHHHhChh--hhhhhCcHHHHhcCCHHH
Confidence 998744 46777 454 4444333210 011111 111111222222221 110 0011 123334456
Q ss_pred HHHHHHHHHHHHHhcCCCC-CcccccC----Cc---------eeEEec---CCCHHHHHHhHhhccE--EEcC-CCeE--
Q 015435 325 IISMRQQLFDALSARGTPG-DWSHIIK----QI---------GMFTFT---GLNSEQVAFMTKEYHI--YMTS-DGRI-- 382 (407)
Q Consensus 325 ~~~~~~~l~~~l~~~~~~~-~~~~~~~----~~---------~~~~~~---~~~~~~~~~~l~~~gi--~~~~-ggRi-- 382 (407)
+.++.+.+.+.|+...... ...+... .| ++-+-+ +++.+.+...|++... ..+- .+++
T Consensus 362 ~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r~~~~~~~l 441 (464)
T PRK04311 362 LRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDRSLEALAARLRLLPPPVIGRIEDGRLLL 441 (464)
T ss_pred HHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCCCCHHHHHHHHhcCCCCEEEEEECCEEEE
Confidence 6677888888887653110 1122211 01 111111 3466777777776443 3322 2344
Q ss_pred EecCCCCCChhHHHHHHHHHHH
Q 015435 383 SMAGLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 383 s~~~~~~e~i~~~~~~l~~~l~ 404 (407)
-+-.+.++|++.++++|++++.
T Consensus 442 d~r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 442 DLRTLEEEDEERLAAALLEALN 463 (464)
T ss_pred EeCcCCHHHHHHHHHHHHHHhh
Confidence 4455778899999999998764
No 331
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.64 E-value=7.8e-14 Score=134.16 Aligned_cols=339 Identities=12% Similarity=0.036 Sum_probs=181.8
Q ss_pred CCCCeeeeeeeeeecCCCccccchhH--HHHHHHHhccccccccC--CCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLVLNVV--RKAEQLLVNDQSRVKEY--LPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~y--~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
.++++||+..|....+.| ...++++ +++.+++.+........ ....-..++.+.+++.. ... ..+.+++
T Consensus 36 dG~~ylD~~~g~~~~~lG-h~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~----~~~~v~f- 108 (431)
T TIGR03251 36 DGRRYLDMFSFFASMALG-MNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVL-GDP----ALPHLFF- 108 (431)
T ss_pred CCCChhhcccChhhcCCC-CCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhc-CCC----CcCEEEE-
Confidence 679999999997766677 6666777 67777765110001111 01111222333333332 111 1268999
Q ss_pred ecCCcccHHHHHHHHHHhhc------C------CCeEEecCCCCCChHHHHhhc-Cce-ee--EEEe------ecC----
Q 015435 105 QCLSGTGSLRVGAEFLARHY------H------QLTIYIPQPTWGNHPKVFTLA-GLS-VK--TYRY------YDP---- 158 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~------~------gd~Vi~~~p~y~~~~~~~~~~-G~~-~~--~v~~------~~~---- 158 (407)
++||++|++.++++.+.+. . +.+|+...-+|++........ |.. .. ..|. ..+
T Consensus 109 -~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~ 187 (431)
T TIGR03251 109 -IEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTF 187 (431)
T ss_pred -eCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccC
Confidence 9999999999998887552 1 367999998888775544322 211 00 0010 000
Q ss_pred ----CCCC-------cChhhHHHHHHcCC-CCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccC
Q 015435 159 ----ATRG-------LNFQGLLEDLRAAP-SGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFAS 225 (407)
Q Consensus 159 ----~~~~-------~d~~~l~~~i~~~~-~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~ 225 (407)
.... -+++++++.+...+ +..++++ ...+.-.|.. .+++.+++|.++|++||+++|+||++.+|..
T Consensus 188 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAaviv-EPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~Gr 266 (431)
T TIGR03251 188 PLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIA-EPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGL 266 (431)
T ss_pred CccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEE-eccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCc
Confidence 0000 12344555665333 3455555 3344445654 7889999999999999999999999998877
Q ss_pred CCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHH-HHh-hhhhcccCCCChhHHHHHHH
Q 015435 226 GSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVES-QLK-LVIRPMYSSPPIHGASIVAT 303 (407)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~ 303 (407)
.+ ..+....+.- ..+++ .++|.+.+ .|++ +..+ +.+ +.. .+. ......+.+.+++++.++.+
T Consensus 267 tG---~~~a~~~~gv-~PDi~---~~gK~~~~----~g~~---~~~~-i~~-~~~~~~~~~~~~~~T~~gnpl~~aaa~a 330 (431)
T TIGR03251 267 TG---TAWAYQQLGV-QPDIV---AFGKKTQV----CGIM---AGRR-VDE-VADNVFAVPSRLNSTWGGNLVDMVRATR 330 (431)
T ss_pred cc---hHHHHHhcCC-CCCEE---EecccCcc----ceEE---ecch-HHH-hhhhcccCccccCCCCCCCHHHHHHHHH
Confidence 54 2333333211 22333 36887521 2344 4421 111 111 111 01122334667777887777
Q ss_pred HhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCCcccccCCceeEEecCC-C---HHHHHHhHhhccEEEc
Q 015435 304 ILKDSTMYKEWTLELKAMADRIISMRQQLFDALSAR--GTPGDWSHIIKQIGMFTFTGL-N---SEQVAFMTKEYHIYMT 377 (407)
Q Consensus 304 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~l~~~gi~~~ 377 (407)
.|+-.. + +...++++++.+++.+.|+++ ..+.........|.++ .+.+ + ...+...+.++||.+.
T Consensus 331 ~L~~l~------~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~-~i~~~~~~~~~~~~~~l~~~Gvl~~ 401 (431)
T TIGR03251 331 ILEIIE------E--ERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMC-AFDLPSTADRDEVIRQLYREGVLLL 401 (431)
T ss_pred HHHHHH------h--cCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeE-EEEeCCHHHHHHHHHHHHhCCeEEe
Confidence 765321 1 122334444445555444432 1110022223334333 2322 2 1234444556899998
Q ss_pred CCC----eEEecC-CCCCChhHHHHHHHH
Q 015435 378 SDG----RISMAG-LSSKTVPHLTDAIHA 401 (407)
Q Consensus 378 ~gg----Ris~~~-~~~e~i~~~~~~l~~ 401 (407)
+.| ||+..- ++++|+++++++|.+
T Consensus 402 ~~g~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 402 GCGERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred cCCCCeEEEECCccCCHHHHHHHHHHHHh
Confidence 865 765543 588999999999876
No 332
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.64 E-value=1.4e-13 Score=141.50 Aligned_cols=297 Identities=15% Similarity=0.102 Sum_probs=189.3
Q ss_pred ccccCCCC---CC----cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcc----cHHHHHHHHHHhhcC-CC----eEE
Q 015435 67 RVKEYLPI---VG----LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGT----GSLRVGAEFLARHYH-QL----TIY 130 (407)
Q Consensus 67 ~~~~y~~~---~g----~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t----~a~~~~~~~~~~~~~-gd----~Vi 130 (407)
..|.|.|. +| +.++|+.+++++ +. ++|.+ +++++ +++.++++ ..+.+ || .|+
T Consensus 553 ~~hp~~p~~~~~g~~~~~~~~r~~la~i~-g~-------~~v~f--~pnaga~ge~a~~~vi~--~~~~~~Gd~~r~~vl 620 (993)
T PLN02414 553 NIHPFAPVDQAQGYQEMFEDLGDLLCEIT-GF-------DSFSL--QPNAGAAGEYAGLMVIR--AYHLSRGDHHRNVCI 620 (993)
T ss_pred hcCCCCCHHHHHHHHHHHHHHHHHHHHHh-CC-------CeEEE--cCCCcHHHHHHHHHHHH--HHHhccCCCCCCEEE
Confidence 45666662 34 556777777766 53 78999 99998 77777743 33554 87 899
Q ss_pred ecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCC-CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHH
Q 015435 131 IPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAP-SGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRS 209 (407)
Q Consensus 131 ~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~-~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~ 209 (407)
++...|......+...|++++.+++ +.++.+|+++|+++++... +++++++ .+|+|-+|. ..++++|+++|++
T Consensus 621 i~~~aH~sn~a~a~~~G~~vv~v~~--d~~G~vDle~L~~~i~~~~~~ta~V~v-t~pSn~gg~---e~~I~eI~~iah~ 694 (993)
T PLN02414 621 IPVSAHGTNPASAAMCGMKIVVVGT--DAKGNINIEELRKAAEAHKDNLAALMV-TYPSTHGVY---EEGIDEICDIIHD 694 (993)
T ss_pred eCCCcCccCHHHHHHCCCEEEEecc--CCCCCcCHHHHHHHHhccCCCeEEEEE-ECCCccccc---cchHHHHHHHHHH
Confidence 9999999998888899999999998 3456899999999998432 4566666 889999888 5579999999999
Q ss_pred cCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCcccc----ccCCCcceeEEeecChhhHHHHHHHHhhh
Q 015435 210 KGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMG----LYGERVGALSIVCKTEDVASRVESQLKLV 285 (407)
Q Consensus 210 ~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~----~~G~r~G~~~~v~~~~~~~~~~~~~~~~~ 285 (407)
+|+++++|.+...-...-. -....+-.++.+|..|.|+ ..|-.+|.+ .+. +.+...+...
T Consensus 695 ~Galv~vDgAq~~a~~~l~---------~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l--~~~-----~~L~p~lPg~ 758 (993)
T PLN02414 695 NGGQVYMDGANMNAQVGLT---------SPGFIGADVCHLNLHKTFCIPHGGGGPGMGPI--GVK-----KHLAPFLPSH 758 (993)
T ss_pred cCCEEEEEecCHHhccCcC---------CccccCCCEEEecCCccCCcCcccCCCCeeeE--EEc-----hhhcccCCCC
Confidence 9999999999632111100 0122345688888999764 334557887 344 2333322211
Q ss_pred h-----------hcccCCC---Ch----hHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Q 015435 286 I-----------RPMYSSP---PI----HGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSH 347 (407)
Q Consensus 286 ~-----------~~~~~~~---~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 347 (407)
. ...+.++ .. ....++..++.... .+.+.+..++...+..|+.+.|.+ +.+ ..+
T Consensus 759 ~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG-----~~Gl~~~a~~a~~nAnYl~~rL~~-~~~--~~~ 830 (993)
T PLN02414 759 PVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMG-----SEGLTDASKIAILNANYMAKRLEG-HYP--VLF 830 (993)
T ss_pred ccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHC-----HhHHHHHHHHHHHHHHHHHHHHHh-hCC--ccc
Confidence 0 0000111 11 22223333333211 145677788888899999999976 321 233
Q ss_pred ccCCceeE-----EecC------CCHHHHHHhHhhccEEEc----CC--C-eEEecC-CCCCChhHHHHHHHHHHHh
Q 015435 348 IIKQIGMF-----TFTG------LNSEQVAFMTKEYHIYMT----SD--G-RISMAG-LSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 348 ~~~~~~~~-----~~~~------~~~~~~~~~l~~~gi~~~----~g--g-Ris~~~-~~~e~i~~~~~~l~~~l~~ 405 (407)
..+.+.+| .+.. .+.+.+.+.|.++||... |. . ||+... .+++|++++++++.++.++
T Consensus 831 ~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e 907 (993)
T PLN02414 831 RGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREE 907 (993)
T ss_pred cCCCCCeeeeEEEeccccccccCCCHHHHHHHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 33333211 1111 344445444446888552 22 2 887664 3679999999999887754
No 333
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.64 E-value=9.5e-15 Score=135.75 Aligned_cols=286 Identities=17% Similarity=0.262 Sum_probs=162.2
Q ss_pred cHHHHHHHHHHHhCCCCCCCCCCceEE-eecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHH---H-------hh
Q 015435 77 LVDFNKLSAKLILGADSPAIKDNRVTT-VQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKV---F-------TL 145 (407)
Q Consensus 77 ~~~l~~~~a~~~~~~~~~~~~~~~i~~-~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~---~-------~~ 145 (407)
++.+....++.+++.. +++... ++..||+.|+.++ +.+++++||+|+..++...+|... . ..
T Consensus 67 iE~la~~ra~~lF~~~-----~~~w~anvqp~SGs~An~av--~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~ 139 (399)
T PF00464_consen 67 IEELAIERAKELFGAE-----PKEWYANVQPHSGSQANLAV--YMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASG 139 (399)
T ss_dssp HHHHHHHHHHHHHT-S-----TTTEEEE---SSHHHHHHHH--HHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHH
T ss_pred HHHHHHHHHHHHhCCC-----cccceEEeecCCchHHHHHH--HHHHHhhcCcEEecChhhccccccccccccccccccc
Confidence 5555555566666753 122222 6788899999888 566789999999998776655331 1 22
Q ss_pred cCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeecccc-cccc
Q 015435 146 AGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAY-QGFA 224 (407)
Q Consensus 146 ~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y-~~~~ 224 (407)
...+.+.+++ +++++.+|.+++++.+.+. +.++|++ ..-.+|- .-+++++.++|++.|.+|++|.++ .+++
T Consensus 140 ~~~~~~~y~~-d~~~~~ID~d~l~~~a~~~-kPklIi~-G~S~y~~-----~~d~~~~reIad~vga~l~~D~sH~~GLI 211 (399)
T PF00464_consen 140 LYFESVPYPV-DPDTGLIDYDELEKLAKEH-KPKLIIC-GASSYPR-----PIDFKRFREIADEVGAYLMADISHIAGLI 211 (399)
T ss_dssp HHSEEEEEEB--TTTSSB-HHHHHHHHHHH---SEEEE-E-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHH
T ss_pred ceEEEEeeee-ecCCCeECHHHHHHHHhhc-CCCEEEE-CchhccC-----ccCHHHHHHHHHhcCcEEEecccccccce
Confidence 3457888888 4677899999999998743 3455555 3323332 568899999999999999999997 5566
Q ss_pred CCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeec---------ChhhHHHHHHHHhhhhhcccCCCCh
Q 015435 225 SGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCK---------TEDVASRVESQLKLVIRPMYSSPPI 295 (407)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (407)
..+.- .+. + + ...++.+|..|+| +|-|-|.+ +++ .++..+.+.+++.....+...+.+.
T Consensus 212 a~g~~---~~P--~-~--~ADvvt~sThKtl--~GPrggiI--~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h 279 (399)
T PF00464_consen 212 AGGLF---PNP--F-P--YADVVTGSTHKTL--RGPRGGII--LTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPH 279 (399)
T ss_dssp HTTSS-----G--C-C--TSSEEEEESSGGG---SSS-EEE--EES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--
T ss_pred ehhee---cCc--c-c--cceEEEeeccccc--cccCceEE--EEcCCccccCCcccccHHHHHHHhccccCCCcccCcc
Confidence 55421 111 1 1 2358889999986 68898887 576 0111134555555555444334444
Q ss_pred hHHHHHHHH-hcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCc-eeEEec-----CCCHHHHHHh
Q 015435 296 HGASIVATI-LKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQI-GMFTFT-----GLNSEQVAFM 368 (407)
Q Consensus 296 ~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~ 368 (407)
....+++++ +.. .+ ....++..+++.++.+.|.+.|++.| +.+....+ +-.+|+ +++...+.+.
T Consensus 280 ~~~iaalAval~e-a~----~~~fk~Ya~qVv~NAk~La~~L~~~G----~~v~~ggTd~H~vlvd~~~~~~~g~~a~~~ 350 (399)
T PF00464_consen 280 MHRIAALAVALKE-AL----SPEFKEYAKQVVKNAKALAEALQERG----FKVVTGGTDNHQVLVDLRSFGIDGKEAEKA 350 (399)
T ss_dssp HHHHHHHHHHHHH-HT----SHHHHHHHHHHHHHHHHHHHHHHHTT-----EEGGGS-SSSEEEEEGGGGTS-HHHHHHH
T ss_pred hhHHHHHHHHHhc-cc----CHHHHHHHHHHHHHHHHHHHHHhhCC----cEEEECCCCCCeEEEEecccccchHHHHHH
Confidence 433333322 221 11 12345666778889999999999999 56553211 122343 4577788899
Q ss_pred HhhccEEEcC----C--------C-eEEec-----CCCCCChhHHHHH
Q 015435 369 TKEYHIYMTS----D--------G-RISMA-----GLSSKTVPHLTDA 398 (407)
Q Consensus 369 l~~~gi~~~~----g--------g-Ris~~-----~~~~e~i~~~~~~ 398 (407)
|++.||.+.. + | ||+.. +..++|++++.+.
T Consensus 351 Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~ 398 (399)
T PF00464_consen 351 LEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAEL 398 (399)
T ss_dssp HHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHHH
T ss_pred HHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhh
Confidence 9999998842 2 3 88643 2455666655543
No 334
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.63 E-value=1e-13 Score=142.93 Aligned_cols=335 Identities=13% Similarity=0.093 Sum_probs=195.9
Q ss_pred eeecCCCccc-cchhHHHHHHHHhccc-ccccc-CCC----CCCcHHHHHHHHHHHhCCCCCCCCCC-ceEEeecCCccc
Q 015435 40 AYRTEEGKPL-VLNVVRKAEQLLVNDQ-SRVKE-YLP----IVGLVDFNKLSAKLILGADSPAIKDN-RVTTVQCLSGTG 111 (407)
Q Consensus 40 ~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~-y~~----~~g~~~l~~~~a~~~~~~~~~~~~~~-~i~~~~t~g~t~ 111 (407)
++.|+.+... ++..+.++...+..+. ...+. |.. ..-+++.|+.+++++ +... ++ +|++ |+|+|+
T Consensus 36 iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~l-ga~~----~~~~VvF--tsnaT~ 108 (805)
T PLN02724 36 VYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYF-NAPP----SDYACVF--TSGATA 108 (805)
T ss_pred EeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHh-CCCc----cceEEEE--eCChHH
Confidence 4455544333 4456777665543111 11111 111 123778899999988 4321 23 5899 999999
Q ss_pred HHHHHHHHHHhhcCCCeEEecCCCCCChHHHHh---hcCceeeEEEeecC------CCCCcCh--hhHHHHHH----c--
Q 015435 112 SLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFT---LAGLSVKTYRYYDP------ATRGLNF--QGLLEDLR----A-- 174 (407)
Q Consensus 112 a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~---~~G~~~~~v~~~~~------~~~~~d~--~~l~~~i~----~-- 174 (407)
++.+++..+ .+.+||+|+++.-.|.+...+.+ ..|++++.++...+ ....++. +.+++.+. .
T Consensus 109 alnlva~~l-~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~ 187 (805)
T PLN02724 109 ALKLVGETF-PWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKRE 187 (805)
T ss_pred HHHHHHHHC-CCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhcccc
Confidence 999985332 25689999998877877665543 45999999887311 1122333 55665431 0
Q ss_pred --CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc-----CceeeeccccccccCCCCCchhHHHHHHHHcCCcEEE
Q 015435 175 --APSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSK-----GLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLV 247 (407)
Q Consensus 175 --~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~-----~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~ 247 (407)
.++++++.+ +..+|-||.+.+.+.+..+.+.++++ ++++++|.+.+ ....+. + + ...+..++
T Consensus 188 ~~~~~t~LVa~-~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~-~g~~pi--D---v----~~~~~Dfl 256 (805)
T PLN02724 188 DDGEAYNLFAF-PSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKG-CGTSPP--D---L----SRYPADFV 256 (805)
T ss_pred ccCCCcceEEE-EccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhh-cCCCCC--C---h----hhcCCCEE
Confidence 123456555 88999999999877555444433332 36899999854 222212 1 1 11245788
Q ss_pred EEecCcccc-ccCCCcceeEEeecChhhHHHHHHHHhhh--------------------hhcccCCCChhHHHHHHHHhc
Q 015435 248 AQSYAKNMG-LYGERVGALSIVCKTEDVASRVESQLKLV--------------------IRPMYSSPPIHGASIVATILK 306 (407)
Q Consensus 248 ~~s~sK~~~-~~G~r~G~~~~v~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~l~ 306 (407)
+.|+.|.+| ..| +|++ +++ ++..+.+...+-.. .+....+++..+..++.++++
T Consensus 257 ~~S~HK~~GgP~G--~G~L--~vr-~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~ 331 (805)
T PLN02724 257 VVSFYKIFGYPTG--LGAL--LVR-RDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFK 331 (805)
T ss_pred EEecceeccCCCC--ceEE--EEe-hhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHH
Confidence 999999887 334 6887 455 23222222111000 011122455555555554443
Q ss_pred ChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC---Cccccc---------CCceeEEec--CC-----CHHHHHH
Q 015435 307 DSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPG---DWSHII---------KQIGMFTFT--GL-----NSEQVAF 367 (407)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~---~~~~~~---------~~~~~~~~~--~~-----~~~~~~~ 367 (407)
-.. . -..++..++.++..+++.+.|+++.... .+.+.. .+++.+.|. +. ....+..
T Consensus 332 ~l~---~--ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~ 406 (805)
T PLN02724 332 LLN---R--LTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEK 406 (805)
T ss_pred HHH---H--hChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHH
Confidence 221 0 1356777888999999999998774210 123332 245666554 33 3455667
Q ss_pred hHhhccEEEcC-----------------------------------------CC--eEEecC-CCCCChhHHHHHHHHHH
Q 015435 368 MTKEYHIYMTS-----------------------------------------DG--RISMAG-LSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 368 ~l~~~gi~~~~-----------------------------------------gg--Ris~~~-~~~e~i~~~~~~l~~~l 403 (407)
++.++||.++. .| |+|++. -+.+|++++++.|++.+
T Consensus 407 l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~ 486 (805)
T PLN02724 407 LASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSF 486 (805)
T ss_pred HHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHh
Confidence 77778887732 14 899876 36799999999999865
No 335
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.63 E-value=2.9e-14 Score=134.09 Aligned_cols=278 Identities=17% Similarity=0.162 Sum_probs=165.8
Q ss_pred cHHHHHHHHHHHhCCCCCCCCCCceEEeecCC-cccHHHHHHHHHHhhc---CCCeEEecCCCCCChHHHHhhcCceeeE
Q 015435 77 LVDFNKLSAKLILGADSPAIKDNRVTTVQCLS-GTGSLRVGAEFLARHY---HQLTIYIPQPTWGNHPKVFTLAGLSVKT 152 (407)
Q Consensus 77 ~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g-~t~a~~~~~~~~~~~~---~gd~Vi~~~p~y~~~~~~~~~~G~~~~~ 152 (407)
+.+.|+.+++++ +.. +++++++ |+| +|++++.++ ...+. +||.|+. .+......+..+..|.+++.
T Consensus 46 ~~~~r~~l~~l~-~~~----~~~~vvf--~~gs~T~a~~~~~--~~l~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~ 115 (355)
T cd00611 46 VNEAESDLRELL-NIP----DNYKVLF--LQGGATGQFAAVP--LNLLGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVI 115 (355)
T ss_pred HHHHHHHHHHHh-CCC----CCceEEE--EcCCchHHHHHHH--HhcCCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEE
Confidence 678899999988 431 2368999 888 999999995 44455 4444444 23323334467888999999
Q ss_pred EEeecCCCCCcC-hhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCch
Q 015435 153 YRYYDPATRGLN-FQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDAD 231 (407)
Q Consensus 153 v~~~~~~~~~~d-~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~ 231 (407)
++.. +.+...+ ++..+..+. +++++|.+ ++..|.||+.++ ++++.||+++++|.+.+.... +. +
T Consensus 116 ~~~~-~~g~~~~~~~~~~~~~~--~~~~lV~~-~h~~t~tG~~~~--------~i~~~~g~~~~VDa~qs~g~~-~i--d 180 (355)
T cd00611 116 VAAK-EEGKYTKIPDVETWDLA--PDAAYVHY-CSNETIHGVEFD--------EVPDTGGVPLVADMSSNILSR-PI--D 180 (355)
T ss_pred Eecc-cccCCCCCCCHhhcCCC--CCCCEEEE-eCCcccccEEcc--------eecccCCCeEEEEccccccCC-CC--C
Confidence 9873 2211113 222223333 56787777 778999999632 345669999999998543332 12 1
Q ss_pred hHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhh-------h-hcccCCCChhHHHHHHH
Q 015435 232 AQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLV-------I-RPMYSSPPIHGASIVAT 303 (407)
Q Consensus 232 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~ 303 (407)
+..+ + +.+.|..|.+|.+| +|.+ +.+ +++.+++....... . .....+++..+..++.+
T Consensus 181 ---v~~~----~--~~~ss~~K~lGP~G--~g~l--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~a 246 (355)
T cd00611 181 ---VSKF----G--VIYAGAQKNLGPAG--VTVV--IVR-KDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGL 246 (355)
T ss_pred ---HHHh----C--EEEeecccccCCCc--eEEE--EEC-HHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHH
Confidence 1111 1 35566899998776 5676 344 44333322110000 0 11123556656666666
Q ss_pred HhcChhhHHhHHH-HHHHHHHHHHHHHHHHHHHHHhc-CCCCCccc-cc--CCc-eeEEec--CC--CHHHHHHhHhhcc
Q 015435 304 ILKDSTMYKEWTL-ELKAMADRIISMRQQLFDALSAR-GTPGDWSH-II--KQI-GMFTFT--GL--NSEQVAFMTKEYH 373 (407)
Q Consensus 304 ~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~-~~--~~~-~~~~~~--~~--~~~~~~~~l~~~g 373 (407)
+++-.. .. .++++.++.+++++++++.|+++ |. +.. .. ... ..+.+. +. + +.....+.+.|
T Consensus 247 al~~l~-----~~gg~e~i~~~~~~l~~~l~~~l~~~~gl---~~~~~~~~~rs~~vvsf~~~~~~l~-~~~~~~~~r~G 317 (355)
T cd00611 247 VLKWLK-----EQGGVEAMEKRNRQKAQLLYDTIDNSNGF---YRGPVDKRARSRMNVPFRLGKEELE-KEFLKEAEAAG 317 (355)
T ss_pred HHHHHH-----HcCCHHHHHHHHHHHHHHHHHHHHhCccc---cccCCCHHHcCceEEEEEcCChhhh-HHHHHHHHHCC
Confidence 655321 12 37788899999999999999998 52 111 11 122 223332 32 2 22223445589
Q ss_pred EEEcCC----C--eEEecC-CCCCChhHHHHHHHHH
Q 015435 374 IYMTSD----G--RISMAG-LSSKTVPHLTDAIHAA 402 (407)
Q Consensus 374 i~~~~g----g--Ris~~~-~~~e~i~~~~~~l~~~ 402 (407)
+.+.++ | |+|+.. .+++|+++++++|+++
T Consensus 318 ~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 318 MIGLKGHRSVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred CcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 985444 3 999875 5789999999999875
No 336
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.62 E-value=3.8e-14 Score=133.03 Aligned_cols=286 Identities=15% Similarity=0.103 Sum_probs=176.6
Q ss_pred CcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCCh--HHHHhhcCceeeEE
Q 015435 76 GLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNH--PKVFTLAGLSVKTY 153 (407)
Q Consensus 76 g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~--~~~~~~~G~~~~~v 153 (407)
-+.+.++.+++++ +.. ++.+++++ +.+||.+++.+ +...+.+||++++...+..++ .+.++.+|.. ..+
T Consensus 49 ~~~~~~~~l~~l~-~~~----~~~~v~~~-~gsgt~~~Ea~--~~nl~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~ 119 (360)
T PRK05355 49 VAEEAEADLRELL-NIP----DNYKVLFL-QGGASLQFAMV--PMNLLGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVA 119 (360)
T ss_pred HHHHHHHHHHHHh-CCC----CCcEEEEE-cCCchHHHHHH--HHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEE
Confidence 3667788888877 421 11345551 67789999999 577788999988776554433 5567788854 555
Q ss_pred EeecCCCCCcChhhHHH-HHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchh
Q 015435 154 RYYDPATRGLNFQGLLE-DLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADA 232 (407)
Q Consensus 154 ~~~~~~~~~~d~~~l~~-~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~ 232 (407)
... +.....+..++++ .++ ++.++|.+ ++..|.||+..+ ++.+| +|+++|+|.+.+ ++..+.
T Consensus 120 ~~~-~~~g~~~~~~~~~~~l~--~~~~~V~~-th~eTstGv~~~--~i~~i------~g~l~vVDavss-~g~~~i---- 182 (360)
T PRK05355 120 ASS-EDDGFTYIPPLDEWQLS--DDAAYVHY-TSNETIDGTEFH--ELPDT------GDVPLVADMSSD-ILSRPI---- 182 (360)
T ss_pred ecc-cccCCCCCCChhhccCC--CCCCEEEE-ccCCCcceEecC--ccccc------CCCcEEEEcCcc-ccCccC----
Confidence 542 2123344444444 565 45677777 677889999764 45555 899999999854 332222
Q ss_pred HHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhh-------hh-hcccCCCChhHHHHHHHH
Q 015435 233 QSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKL-------VI-RPMYSSPPIHGASIVATI 304 (407)
Q Consensus 233 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~ 304 (407)
.+.. .+ +++.|..|.+|.+| +|.+ ..+ +++.+++...+.. .. .....+++.....++.++
T Consensus 183 -dv~~----~d--~~~~ssqK~lgP~G--lg~l--~~s-~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~a 250 (360)
T PRK05355 183 -DVSK----FG--LIYAGAQKNIGPAG--LTIV--IVR-EDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLV 250 (360)
T ss_pred -CHHH----cc--EEEEeccccccCCc--eEEE--EEC-HHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHH
Confidence 1211 12 88888999998766 5666 344 4433332221110 11 112346677777777766
Q ss_pred hcChhhHHhHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCCccc-cc--CCc-eeEEec--CC-CHHHHHHhHhhccEEE
Q 015435 305 LKDSTMYKEWTL-ELKAMADRIISMRQQLFDALSARGTPGDWSH-II--KQI-GMFTFT--GL-NSEQVAFMTKEYHIYM 376 (407)
Q Consensus 305 l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~--~~~-~~~~~~--~~-~~~~~~~~l~~~gi~~ 376 (407)
++-.. .. .+++..++.++.++++++.+++++. +.. .. ... ....+. +. ..+.....+.++|+.+
T Consensus 251 L~~i~-----~~gG~e~i~~r~~~l~~~l~~~l~~~~~---~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~ 322 (360)
T PRK05355 251 FKWLK-----EQGGVAAMEKRNQEKAALLYDAIDSSDF---YRNPVAPEDRSRMNVPFTLADEELDKKFLAEAKAAGLVG 322 (360)
T ss_pred HHHHH-----HccCHHHHHHHHHHHHHHHHHHHHhCCC---cccCCChhhcCCcEEEEEcCChHHHHHHHHHHHHCCCcc
Confidence 65331 13 3788889999999999999999873 221 11 112 223332 22 1123333445589988
Q ss_pred cCC----C--eEEecC-CCCCChhHHHHHHHHHHHhhC
Q 015435 377 TSD----G--RISMAG-LSSKTVPHLTDAIHAAVTRMG 407 (407)
Q Consensus 377 ~~g----g--Ris~~~-~~~e~i~~~~~~l~~~l~~~~ 407 (407)
.++ | |+|+.. .+.+|++++++.|++++++.+
T Consensus 323 ~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~~~ 360 (360)
T PRK05355 323 LKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFERRHG 360 (360)
T ss_pred cCCCCccCcEEEECCCCCCHHHHHHHHHHHHHHHHhcC
Confidence 655 3 999875 578999999999999987643
No 337
>PLN02263 serine decarboxylase
Probab=99.61 E-value=4e-13 Score=127.46 Aligned_cols=318 Identities=11% Similarity=0.029 Sum_probs=198.9
Q ss_pred HHHHHHHHhccccccccCCC-CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEec
Q 015435 54 VRKAEQLLVNDQSRVKEYLP-IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIP 132 (407)
Q Consensus 54 ~~~~~~~~~~~~~~~~~y~~-~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~ 132 (407)
+...+.....+.++...+++ ..+..++.+.+.+|+....+.+-....-.+ |+|||+++..++...+...+...|+++
T Consensus 107 l~~~l~~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~p~~~~~G~v--tsGGTEaNL~Al~aARe~~~~~vvy~S 184 (470)
T PLN02263 107 LGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYI--TNCGTEGNLHGILVGREVFPDGILYAS 184 (470)
T ss_pred HHHHHHhhccCCCCccccCCcchhHHHHHHHHHHHHHHHhCCCCCCCeEEE--eCcHHHHHHHHHHHHHhhcCCcEEEEc
Confidence 33333333323344444433 124567777777777444333211113577 999999999986555544444578889
Q ss_pred CCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 015435 133 QPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGL 212 (407)
Q Consensus 133 ~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~ 212 (407)
+.+|.+..+++..+|++++.+|. +.++.+|+++|++++.+....+.+++.+-+..+||. .+++++|.++|+++|+
T Consensus 185 ~~aH~Sv~KAa~llgi~~~~Vp~--d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GA---iDpi~eIa~i~~~~g~ 259 (470)
T PLN02263 185 RESHYSVFKAARMYRMECVKVDT--LVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGA---VDDLDLVIKTLEECGF 259 (470)
T ss_pred CCccHHHHHHHHhcCCcceEecc--CCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcC---CCCHHHHHHHHHHcCC
Confidence 99999999999999999999998 346789999999999854445677766778889999 6789999999999997
Q ss_pred -----eeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHH---HHhh
Q 015435 213 -----LPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVES---QLKL 284 (407)
Q Consensus 213 -----~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~---~~~~ 284 (407)
++.+|.+|.++...-.+ ....+ .+. ..-.-+..+.+|.++ ....+|.+ +.+++. .+.+.. ++..
T Consensus 260 ~~~~iwlHVDAA~GG~~lPf~~-~~~~~-df~--~~vDSIsvD~HK~l~-~P~~cgvl--l~R~~~-~~~~~~~~~Yl~~ 331 (470)
T PLN02263 260 SQDRFYIHCDGALFGLMMPFVK-RAPKV-TFK--KPIGSVSVSGHKFVG-CPMPCGVQ--ITRMEH-INVLSSNVEYLAS 331 (470)
T ss_pred ccCCeeEEEeccchhhHhhhcc-ccccc-CCC--cCccEEEECCccccC-CCcCEEEE--EEehhh-HhhhccChHhhCC
Confidence 99999999877641110 11011 111 113345567899877 44778888 577432 111111 1111
Q ss_pred hhhcccCCCChhH-----HHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecC
Q 015435 285 VIRPMYSSPPIHG-----ASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTG 359 (407)
Q Consensus 285 ~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 359 (407)
.. .+...+..+ ..++...+. .+.+.+..++..++.+++.+.+++.|. ..+..|......|..
T Consensus 332 ~d--~ti~gSR~g~~al~lW~~L~~~G--------~~G~~~~i~~~~~~A~~l~~~l~~~g~---~~~~~p~s~~V~f~~ 398 (470)
T PLN02263 332 RD--ATIMGSRNGHAPIFLWYTLNRKG--------YRGFQKEVQKCLRNAHYLKDRLREAGI---SAMLNELSSTVVFER 398 (470)
T ss_pred CC--CCcCCCCCcHHHHHHHHHHHHhC--------HHHHHHHHHHHHHHHHHHHHHHHhCCC---eEEeCCCceEEEEec
Confidence 10 111222222 222222221 145677778888899999999998873 345566666666543
Q ss_pred CCHHHHHHhHhhccEEEcCCC---eEEecC-CCCCChhHHHHHHHHHHH
Q 015435 360 LNSEQVAFMTKEYHIYMTSDG---RISMAG-LSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 360 ~~~~~~~~~l~~~gi~~~~gg---Ris~~~-~~~e~i~~~~~~l~~~l~ 404 (407)
-..+. ..+|..+...+ ||.+.. ++.+.++++++.|++..+
T Consensus 399 p~~~~-----~~~gW~L~~~~~~~Hivvmphv~~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 399 PKDEE-----FVRRWQLACQGNIAHVVVMPSVTIEKLDYFLKELVEKRS 442 (470)
T ss_pred CchHH-----hhcceEEccCCCcEEEEEcCCCCHHHHHHHHHHHHHHHh
Confidence 32221 12466665544 887664 577889999999887664
No 338
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.61 E-value=2.4e-13 Score=121.42 Aligned_cols=291 Identities=14% Similarity=0.093 Sum_probs=185.3
Q ss_pred cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEee
Q 015435 77 LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYY 156 (407)
Q Consensus 77 ~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~ 156 (407)
..+|...+|++- .+ +..++ .+++--|+...+-.+...-||-.+.-..-.+.+....++..++.-..+..
T Consensus 218 hv~LE~eLA~LH-qK-------~aALl--FsSCfVANDstLftLak~lpgcei~SD~gNHASMI~GIrns~v~K~IFrH- 286 (570)
T KOG1360|consen 218 HVRLEAELADLH-QK-------EAALL--FSSCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRH- 286 (570)
T ss_pred hhhHHHHHHHHh-cC-------cceee--eeeeeeccchHHHHHHHHCCCcEEeccccchHHHHHHhhhcCCcceeecc-
Confidence 567788888876 43 33333 44554455554323444458877777777888888888888776665644
Q ss_pred cCCCCCcChhhHHHHHHcC-CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHH
Q 015435 157 DPATRGLNFQGLLEDLRAA-PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSV 235 (407)
Q Consensus 157 ~~~~~~~d~~~l~~~i~~~-~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~ 235 (407)
-|++.|++++... ++.+.|+-.-+.+.-+|.+- ++++|+++++|||.+.++||+++-..|++.. .++
T Consensus 287 ------ND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavc---pleelcDvah~yGAiTFlDEVHAVGlYG~rG---aGv 354 (570)
T KOG1360|consen 287 ------NDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVC---PLEELCDVAHKYGAITFLDEVHAVGLYGPRG---AGV 354 (570)
T ss_pred ------CCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcC---CHHHHHHHHHHhCceeeeehhhhhccccCCC---CCc
Confidence 2778888887653 34455555477888899855 5899999999999999999998766665321 111
Q ss_pred HHH-HHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhH
Q 015435 236 RMF-VADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEW 314 (407)
Q Consensus 236 ~~~-~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 314 (407)
..- .-...-.|+.+++.|+||+-| ||+ +...++.+-++.....++. +.+.|+..+..++.+.+...
T Consensus 355 gerdGvm~kvDiIsGTLgKafGcVG---GYI---Aat~~LvDmiRSyAaGFIF--TTSLPP~vl~GAleaVr~lk----- 421 (570)
T KOG1360|consen 355 GERDGVMHKVDIISGTLGKAFGCVG---GYI---AATRKLVDMIRSYAAGFIF--TTSLPPMVLAGALEAVRILK----- 421 (570)
T ss_pred cccCCcchhhhhcccchhhhccccc---cee---hhhhhHHHHHHHhcCceEE--ecCCChHHHHhHHHHHHHHh-----
Confidence 000 011244588999999999877 888 5555555544444433332 22334444444444333211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEe-cCC---CHHHHHHhHhhccEEEcCC-------C---
Q 015435 315 TLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTF-TGL---NSEQVAFMTKEYHIYMTSD-------G--- 380 (407)
Q Consensus 315 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~l~~~gi~~~~g-------g--- 380 (407)
..+-..+|...+++..++++.|.++| +.+++...-+... ++- +.+..+.++.+++|++... |
T Consensus 422 ~~eg~~lR~~hqrnv~~~kq~l~~~G----iPVi~~pSHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~ 497 (570)
T KOG1360|consen 422 SEEGRVLRRQHQRNVKYVKQLLMELG----IPVIPNPSHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTER 497 (570)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHcC----CcccCCCcceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCccccccee
Confidence 02245677888899999999999999 4555443433322 222 3455778999999998542 4
Q ss_pred -eEEecC-CCCCChhHHHHHHHHHHHhhC
Q 015435 381 -RISMAG-LSSKTVPHLTDAIHAAVTRMG 407 (407)
Q Consensus 381 -Ris~~~-~~~e~i~~~~~~l~~~l~~~~ 407 (407)
||+... .+++-++.+++.+..+.+.+|
T Consensus 498 LRiaPTP~HT~~mm~~lv~~l~~vw~~v~ 526 (570)
T KOG1360|consen 498 LRIAPTPHHTPQMMNILVNALLDVWNEVG 526 (570)
T ss_pred eecCCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 665432 466778888888888877654
No 339
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.61 E-value=5e-13 Score=129.27 Aligned_cols=270 Identities=20% Similarity=0.238 Sum_probs=158.3
Q ss_pred eecCCcccHHHHHHHHHHhhcCCCeEEecCC---CCCChHHHHh---hcCce----eeEEEeecCCCCCcChhhHHHHHH
Q 015435 104 VQCLSGTGSLRVGAEFLARHYHQLTIYIPQP---TWGNHPKVFT---LAGLS----VKTYRYYDPATRGLNFQGLLEDLR 173 (407)
Q Consensus 104 ~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p---~y~~~~~~~~---~~G~~----~~~v~~~~~~~~~~d~~~l~~~i~ 173 (407)
++.++|+.|+..+ +.+.+.+||+|+..+. .|.++..... ..+.. ++++.. +++++.+|++++++.+.
T Consensus 104 v~~~SG~~AN~av--~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~-~~~~g~iD~d~Le~~l~ 180 (475)
T PLN03226 104 VQPLSGSPANFAV--YTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRL-DESTGLIDYDKLEKKAM 180 (475)
T ss_pred cCcCchHHHHHHH--HHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeee-cCCCCCcCHHHHHHHHh
Confidence 5568889999988 4666899999998553 3333332221 11222 224444 34567899999999987
Q ss_pred cCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCc
Q 015435 174 AAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAK 253 (407)
Q Consensus 174 ~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 253 (407)
+. +++++++ . .++ +|... |+++|.++|+++|+++++|+++....... +..+ .......++++|++|
T Consensus 181 ~~-~pklIv~-~-~S~-~s~~~---D~a~i~~ia~~~ga~LlvD~AH~~Gli~~---~~~~----~p~~~~Div~~t~hK 246 (475)
T PLN03226 181 LF-RPKLIIA-G-ASA-YPRDW---DYARMRKIADKVGALLMCDMAHISGLVAA---QEAA----SPFEYCDVVTTTTHK 246 (475)
T ss_pred hc-CCeEEEE-e-cCc-CCCcc---CHHHHHHHHHHcCCEEEEEchhhhCcccC---CCCC----CCCCCCeEEEecCcc
Confidence 43 2334433 2 232 56644 57788888999999999999975433221 1110 001134588999999
Q ss_pred cccccCCCcceeEEeecChhhHH----------HHHHHHhhhhhc-ccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHH
Q 015435 254 NMGLYGERVGALSIVCKTEDVAS----------RVESQLKLVIRP-MYSSPPIHGASIVATILKDSTMYKEWTLELKAMA 322 (407)
Q Consensus 254 ~~~~~G~r~G~~~~v~~~~~~~~----------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 322 (407)
++. |.+-|++ +++ ++..+ .+.......... ...+++.....++..+++... ....++.+
T Consensus 247 ~L~--GP~Gg~I--~~~-~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~-----~~~~~~~~ 316 (475)
T PLN03226 247 SLR--GPRGGMI--FFR-KGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAM-----TPEFKAYQ 316 (475)
T ss_pred ccc--CCCceEE--EEc-hhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHh-----CcCHHHHH
Confidence 883 3343666 454 33221 121112211111 112333333333333343210 01245667
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcccccC--CceeEE--e--cCCCHHHHHHhHhhccEEEcCC------------C-eEE
Q 015435 323 DRIISMRQQLFDALSARGTPGDWSHIIK--QIGMFT--F--TGLNSEQVAFMTKEYHIYMTSD------------G-RIS 383 (407)
Q Consensus 323 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~--~~~~~~--~--~~~~~~~~~~~l~~~gi~~~~g------------g-Ris 383 (407)
+++.++.++|.+.|++.| +.+..+ ...+.. + .+++...+...|++.||.+..+ | |+.
T Consensus 317 ~~~~~na~~L~~~L~~~G----~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiG 392 (475)
T PLN03226 317 KQVKANAAALANRLMSKG----YKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIG 392 (475)
T ss_pred HHHHHHHHHHHHHHHhCC----CEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccC
Confidence 889999999999999887 555432 122221 1 1456777888888899988642 2 652
Q ss_pred -----ecCCCCCChhHHHHHHHHHHH
Q 015435 384 -----MAGLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 384 -----~~~~~~e~i~~~~~~l~~~l~ 404 (407)
-.+++++|++++.+.|.++++
T Consensus 393 t~~lt~~g~~~~d~~~ia~~i~~~~~ 418 (475)
T PLN03226 393 TPAMTSRGLVEKDFEKVAEFLHRAVT 418 (475)
T ss_pred cHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 223578999999999999886
No 340
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.61 E-value=1.5e-14 Score=130.49 Aligned_cols=235 Identities=20% Similarity=0.150 Sum_probs=150.6
Q ss_pred cCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCC---hHHHHhhc
Q 015435 70 EYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGN---HPKVFTLA 146 (407)
Q Consensus 70 ~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~---~~~~~~~~ 146 (407)
.|+......++.+.+++++ +. +..++ +++||.+..+++..+ +.+++.|++..++|.. ........
T Consensus 24 ~Yg~D~~~~~l~~~i~~l~-g~-------e~a~f--~~sGT~An~~al~~~--~~~~~~vi~~~~aHi~~~E~ga~~~~~ 91 (290)
T PF01212_consen 24 AYGEDPTTARLEERIAELF-GK-------EAALF--VPSGTMANQLALRAH--LRPGESVICADTAHIHFDETGAIEELS 91 (290)
T ss_dssp CTTSSHHHHHHHHHHHHHH-TS-------SEEEE--ESSHHHHHHHHHHHH--HHTTEEEEEETTEHHHHSSTTHHHHHT
T ss_pred ccCCChhHHHHHHHHHHHc-CC-------CEEEE--eCCCChHHHHHHHHH--HhcCCceeccccceeeeeccchhhHhc
Confidence 5888888899999999988 65 66778 999999999995444 6799999999987642 22333568
Q ss_pred CceeeEEEeecCCCCCcChhhHHHHHHcC----CCCcEEEEecCCCCCC-CCCCCHHHHHHHHHHHHHcCceeeeccccc
Q 015435 147 GLSVKTYRYYDPATRGLNFQGLLEDLRAA----PSGAIVLLHACAHNPT-GVDPTLEQWEQIRQLMRSKGLLPFFDSAYQ 221 (407)
Q Consensus 147 G~~~~~v~~~~~~~~~~d~~~l~~~i~~~----~~~~~v~i~~~p~NPt-G~~~~~~~l~~i~~~~~~~~~~li~D~~y~ 221 (407)
|.+++.++. ++.+.+++++|++.+.+. ++.++|++ .+++|.. |++++.+++++|.++|++||+.|+.|.+-.
T Consensus 92 G~~~~~l~~--~~~G~l~~~~l~~~~~~~~~h~~~~~~v~l-e~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl 168 (290)
T PF01212_consen 92 GAKLIPLPS--DDDGKLTPEDLEAAIEEHGAHHPQPAVVSL-ENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARL 168 (290)
T ss_dssp TCEEEEEBE--CTGTBB-HHHHHHHHHHHTGTSGGEEEEEE-ESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTH
T ss_pred CcEEEECCC--cccCCCCHHHHHHHhhhccccCCCccEEEE-EecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhH
Confidence 999999987 333679999999999752 23455566 7888764 889999999999999999999999999953
Q ss_pred cccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHH---
Q 015435 222 GFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGA--- 298 (407)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 298 (407)
.-... ....++..+. ....++..|++|..++++ |.+ ++.++++.++.....+.....+.... .+..
T Consensus 169 ~~a~~---~~~~~~~e~~--~~~D~v~~~~tK~~g~~~---Gav--l~~~~~~i~~~~~~~k~~gg~~~~~G-~~~a~~~ 237 (290)
T PF01212_consen 169 ANAAA---ALGVSLAEIA--AGADSVSFGGTKNGGAPG---GAV--LAGNKEFIAKARRQRKRLGGGMRQAG-VLAAAEL 237 (290)
T ss_dssp HHHHC---HHHHHHHHHH--TTSSEEEEETTSTT-SSS---EEE--EEESHHHHHHHHHHHHHHTHHHHHTT-HHHHHHH
T ss_pred HHhhh---cccccHHHHh--hhCCEEEEEEEccccccc---ceE--EEechHHHHHHHHHHHHhccCeeecc-eeeeech
Confidence 22211 0122344443 234466778999887664 777 56666644433222222111111011 1111
Q ss_pred --HHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015435 299 --SIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARG 340 (407)
Q Consensus 299 --~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 340 (407)
..+...++.. .....+..++.+.+.+.|+.++
T Consensus 238 ~~~~~l~~l~~~----------~~~~~~~~~~A~~La~~l~~~~ 271 (290)
T PF01212_consen 238 YQFAALRALELW----------LERARHANAMAKRLAAGLEALG 271 (290)
T ss_dssp HHHHHHCHEECS----------HHHHHCHHHHHHCHHHCHHEEC
T ss_pred hhHHHHHHHHhh----------HHHHHHHHHHHHHHHHHHHHCC
Confidence 1222222211 2333556677888999998887
No 341
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.61 E-value=5.6e-13 Score=135.35 Aligned_cols=347 Identities=14% Similarity=0.103 Sum_probs=188.4
Q ss_pred CeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCccc
Q 015435 32 VKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTG 111 (407)
Q Consensus 32 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~ 111 (407)
.++|+..|++..+.|....+++++++.+++. .-.+.. .+.... +-...+|+.+....+.. ..+.+++ +++|++
T Consensus 366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~-rl~hv~--~~~~~h-epa~~LAe~L~~~~~~~-~l~rVff--s~sGSe 438 (817)
T PLN02974 366 QQFDACASWWTQGPDPTLQPELARAVAYAAG-RYGHVM--FPENVH-EPALRAAELLLGGPGKG-WASRVFF--SDNGST 438 (817)
T ss_pred eEEEcchhHHHhCCCcCCCHHHHHHHHHHHh-hCCccc--cCccCC-HHHHHHHHHHHhccCCC-CCCEEEE--CCchHH
Confidence 7999999987655552346778888888876 111111 111112 22233444442211100 0268999 999999
Q ss_pred HHHHHHHHHHh-h-c-C----------------CCeEEecCCCCCChHHHHhhcCc----------e-----eeEEEeec
Q 015435 112 SLRVGAEFLAR-H-Y-H----------------QLTIYIPQPTWGNHPKVFTLAGL----------S-----VKTYRYYD 157 (407)
Q Consensus 112 a~~~~~~~~~~-~-~-~----------------gd~Vi~~~p~y~~~~~~~~~~G~----------~-----~~~v~~~~ 157 (407)
|++.++++... . . . ..+|+....+|++........+. . ...++...
T Consensus 439 AvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~ 518 (817)
T PLN02974 439 AIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPT 518 (817)
T ss_pred HHHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCc
Confidence 99999998842 3 1 1 23588888888765443322211 0 00010000
Q ss_pred ------------CCCC-----------C-----cC------------hhhHHHHHHc-----CC-CCcEEEEecCCCCCC
Q 015435 158 ------------PATR-----------G-----LN------------FQGLLEDLRA-----AP-SGAIVLLHACAHNPT 191 (407)
Q Consensus 158 ------------~~~~-----------~-----~d------------~~~l~~~i~~-----~~-~~~~v~i~~~p~NPt 191 (407)
+..+ . ++ .+.+++.+.+ .+ +..++++-+-.+.-.
T Consensus 519 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaG 598 (817)
T PLN02974 519 VGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAG 598 (817)
T ss_pred cccccccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCC
Confidence 0000 0 00 1446666642 12 234444432225556
Q ss_pred CCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccC-CCcceeEEee
Q 015435 192 GVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYG-ERVGALSIVC 269 (407)
Q Consensus 192 G~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~v~ 269 (407)
|++ +++..++++.++|++||+++|+||++.+|+..+ ..+....+.- ..++++ ++|.++ .| +++|.+ ++
T Consensus 599 Gmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG---~~fa~e~~gv-~PDIi~---~gKgLt-gG~~Plaa~--l~ 668 (817)
T PLN02974 599 GMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLG---VESAWELLGC-KPDIAC---YAKLLT-GGLVPLAAT--LA 668 (817)
T ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCccc---chhhHHhcCC-CCCEEe---eccccc-CCCCccEEE--EE
Confidence 776 579999999999999999999999999998875 3344333321 233333 789998 78 699998 46
Q ss_pred cChhhHHHHHHHH--hhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHH----HhcCCCC
Q 015435 270 KTEDVASRVESQL--KLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDAL----SARGTPG 343 (407)
Q Consensus 270 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l----~~~~~~~ 343 (407)
. +++.+.+...- ..+....+++.+++++.++.+.|+-.. +. +..+.+.++.++..+++.+.| .+.+.
T Consensus 669 ~-~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~--~~--~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~-- 741 (817)
T PLN02974 669 T-EEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYK--DP--STNPNLIPPGSRLRELWDEELVRAISSLPN-- 741 (817)
T ss_pred c-HHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHH--cc--cHHHHHHHHHHHHHHHHHHHHHHHHhhCCC--
Confidence 5 44433332100 011223456788888888877765321 00 112233344444444444444 22221
Q ss_pred CcccccCCceeEEe--cC------CC---HHHHHHhHh-hccEEEcCCC---eEEec-CCCCCChhHHHHHHHHHH
Q 015435 344 DWSHIIKQIGMFTF--TG------LN---SEQVAFMTK-EYHIYMTSDG---RISMA-GLSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 344 ~~~~~~~~~~~~~~--~~------~~---~~~~~~~l~-~~gi~~~~gg---Ris~~-~~~~e~i~~~~~~l~~~l 403 (407)
+.-+...|.++.+ .. .+ ...+.+.+. ++|+.+.+.| |+... ..++++++++++.|.+.|
T Consensus 742 -V~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 742 -VERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPLGNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred -eeEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEecCCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 2222333333322 11 11 122333344 7899999976 44322 247799999999998765
No 342
>PLN02880 tyrosine decarboxylase
Probab=99.60 E-value=9.2e-13 Score=128.08 Aligned_cols=330 Identities=10% Similarity=0.092 Sum_probs=193.8
Q ss_pred cccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCC-----CCceEEeecCCcccHHHHHHHHHHh
Q 015435 48 PLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIK-----DNRVTTVQCLSGTGSLRVGAEFLAR 122 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~-----~~~i~~~~t~g~t~a~~~~~~~~~~ 122 (407)
+.+...+...+.... ......|...+...++.+.+.+|+....+.+-. ...-++ |+|||+++..++...+.
T Consensus 93 ~~~~~~lad~l~~~~--n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~--tsggs~anl~al~~AR~ 168 (490)
T PLN02880 93 SSVAGFLGEMLSAGL--NIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVI--QGTASEAVLVVLLAARD 168 (490)
T ss_pred CcHHHHHHHHHHHhh--ccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEE--cCccHHHHHHHHHHHHH
Confidence 344455555554443 122233433445667777777777443332200 023677 99999998877544332
Q ss_pred h--c-C-----CC-eEEecCCCCCChHHHHhhcCce---eeEEEeecCCCCCcChhhHHHHHHcC---CCCcEEEEecCC
Q 015435 123 H--Y-H-----QL-TIYIPQPTWGNHPKVFTLAGLS---VKTYRYYDPATRGLNFQGLLEDLRAA---PSGAIVLLHACA 187 (407)
Q Consensus 123 ~--~-~-----gd-~Vi~~~p~y~~~~~~~~~~G~~---~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~v~i~~~p 187 (407)
. . . .. .|++++-+|.+..+++..+|+. ++.||.+...++.+|++.|++++.+. ...+.+++-+-+
T Consensus 169 ~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataG 248 (490)
T PLN02880 169 RVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVG 248 (490)
T ss_pred HHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecC
Confidence 1 1 1 12 4566778899999999999984 78888843345789999999998642 335676665677
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHc-CCcEEEEEecCccccccCCCcceeE
Q 015435 188 HNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVAD-GGECLVAQSYAKNMGLYGERVGALS 266 (407)
Q Consensus 188 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~ 266 (407)
..+||. .+++++|+++|++||+++.+|.+|.++.... ...+..... ....-+..+++|.++ ....+|.+
T Consensus 249 TT~~Ga---iDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~-----~~~~~~l~gie~aDSit~d~HKwl~-~P~~~g~l- 318 (490)
T PLN02880 249 TTSSTA---VDPLLELGKIAKSNGMWFHVDAAYAGSACIC-----PEYRHYIDGVEEADSFNMNAHKWFL-TNFDCSLL- 318 (490)
T ss_pred CCcCcc---cCcHHHHHHHHHHcCCEEEEehhhHHHHHhC-----HHHHHHhcCchhcCEEEECchhhcC-CCccEEEE-
Confidence 888888 5568899999999999999999998775421 111111121 233466778999876 45777888
Q ss_pred EeecChhhHHHHHHHHhhhhhcc---------c-----C---CCC---hhHHHHHHHHhcChhhHHhHHHHHHHHHHHHH
Q 015435 267 IVCKTEDVASRVESQLKLVIRPM---------Y-----S---SPP---IHGASIVATILKDSTMYKEWTLELKAMADRII 326 (407)
Q Consensus 267 ~v~~~~~~~~~~~~~~~~~~~~~---------~-----~---~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (407)
+++++.. +...+.....+. . . .+. .+........+. .+.+.+..++..
T Consensus 319 -lvr~~~~---l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G--------~~g~~~~i~~~~ 386 (490)
T PLN02880 319 -WVKDRNA---LIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYG--------VENLQSYIRNHI 386 (490)
T ss_pred -EEeCHHH---HHHHHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhC--------HHHHHHHHHHHH
Confidence 5765432 211111110000 0 0 000 111111111111 133455555555
Q ss_pred HHHHHHHHHHHhcCCCCCccccc-CCceeEEec--C--CCH--------HHHHHhHhhccEEEcCC---C----eEEecC
Q 015435 327 SMRQQLFDALSARGTPGDWSHII-KQIGMFTFT--G--LNS--------EQVAFMTKEYHIYMTSD---G----RISMAG 386 (407)
Q Consensus 327 ~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~--~--~~~--------~~~~~~l~~~gi~~~~g---g----Ris~~~ 386 (407)
+.++++.+.+++.+. ++... +..++..|. + .+. +...++.++..+.+... | |+++..
T Consensus 387 ~lA~~~~~~l~~~~~---~el~~~~~~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n 463 (490)
T PLN02880 387 KLAKEFEQLVAQDSR---FEVVTPRIFSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGA 463 (490)
T ss_pred HHHHHHHHHHhcCCC---EEEecCCceEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecC
Confidence 888889888877642 66544 344444443 2 111 22334455566766553 3 998765
Q ss_pred -C-CCCChhHHHHHHHHHHHhh
Q 015435 387 -L-SSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 387 -~-~~e~i~~~~~~l~~~l~~~ 406 (407)
. ++++++.+++.|.++.+++
T Consensus 464 ~~tt~~di~~~~~~i~~~~~~~ 485 (490)
T PLN02880 464 PLTEERHVTAAWKVLQDEASKL 485 (490)
T ss_pred CCCCHHHHHHHHHHHHHHHHHH
Confidence 2 4488999999998877653
No 343
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.60 E-value=1e-14 Score=136.06 Aligned_cols=233 Identities=17% Similarity=0.168 Sum_probs=139.9
Q ss_pred CCC-cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeE
Q 015435 74 IVG-LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKT 152 (407)
Q Consensus 74 ~~g-~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~ 152 (407)
+.| +.+..+.+|+.+ +.+ +-.++ |+|+|.++.++ +++.+.+||+|+++..+|.+....+...|+++++
T Consensus 64 p~G~I~eAe~~aA~~f-GAd------~t~fl--vnGsT~g~~a~--i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvy 132 (417)
T PF01276_consen 64 PEGIIKEAEELAARAF-GAD------KTFFL--VNGSTSGNQAM--IMALCRPGDKVLVDRNCHKSVYNALILSGAIPVY 132 (417)
T ss_dssp TBTHHHHHHHHHHHHH-TES------EEEEE--SSHHHHHHHHH--HHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEE
T ss_pred CccHHHHHHHHHHHhc-CCC------eEEEE--ecCchHHHHHH--HHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEE
Confidence 344 555666666666 652 34555 99999999999 5777899999999999999999999999999999
Q ss_pred EEeecCCC---CCcCh-----hhHHHHHHcCCCCcE---EEEecCCCCCC--CCCCCHHHHHHHHHHHHHcCceeeeccc
Q 015435 153 YRYYDPAT---RGLNF-----QGLLEDLRAAPSGAI---VLLHACAHNPT--GVDPTLEQWEQIRQLMRSKGLLPFFDSA 219 (407)
Q Consensus 153 v~~~~~~~---~~~d~-----~~l~~~i~~~~~~~~---v~i~~~p~NPt--G~~~~~~~l~~i~~~~~~~~~~li~D~~ 219 (407)
++..+.+. .++++ +.+++++.+.|..+. ++++ ||| |+++ ++++|+++|+++++.|++|||
T Consensus 133 i~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt----~PTY~Gv~~---di~~I~~~~h~~~~~llvDEA 205 (417)
T PF01276_consen 133 IPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLT----SPTYYGVCY---DIKEIAEICHKHGIPLLVDEA 205 (417)
T ss_dssp EEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEE----SS-TTSEEE----HHHHHHHHCCTECEEEEE-T
T ss_pred ecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEe----CCCCCeEEE---CHHHHHHHhcccCCEEEEEcc
Confidence 98752221 24566 999999998776655 6662 454 8866 588888899999999999999
Q ss_pred cccc-cCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChh--hHHHHHHHHhhhhhcccCCCChh
Q 015435 220 YQGF-ASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTED--VASRVESQLKLVIRPMYSSPPIH 296 (407)
Q Consensus 220 y~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 296 (407)
|... .+.+..........=......++++.|..|.+ +++.-+.++ ...+.. ..+++...+...+ +++|+.+
T Consensus 206 hGah~~F~~lp~~a~~~gad~~~~~~~~vvqS~HKtL--~altQts~l-h~~~~~~v~~~~~~~~l~~~~---TTSPSY~ 279 (417)
T PF01276_consen 206 HGAHFGFHPLPRSALALGADRPNDPGIIVVQSTHKTL--PALTQTSML-HVKGDRIVDHERVNEALSMHQ---TTSPSYP 279 (417)
T ss_dssp T-TTGGCSGGGTTCSSTTSS-CTSBEEEEEEEHHHHS--SS-TT-EEE-EEETCCCTTHHHHHHHHHHHS----SS--HH
T ss_pred ccccccCCCCccchhhccCccccccceeeeechhhcc--cccccceEE-EecCCCcccHHHHHHHHHHHc---CCChHHH
Confidence 8543 44311111110000011123569999999986 566555544 444443 3455555554443 3355554
Q ss_pred HHHHHHHHhcChhhHHhH-HHHHHHHHHHHHHHHHHHHHHH
Q 015435 297 GASIVATILKDSTMYKEW-TLELKAMADRIISMRQQLFDAL 336 (407)
Q Consensus 297 ~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l 336 (407)
.+..+..+.. ++ ...-+++.++..++.+.+++.+
T Consensus 280 lmASlD~a~~------~m~~~~G~~l~~~~i~~a~~~R~~i 314 (417)
T PF01276_consen 280 LMASLDVARA------QMEEEEGRELLEEAIELAEEFRKKI 314 (417)
T ss_dssp HHHHHHHHHH------HHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH------HHhhhhhHHHHHHHHHHHHHHHHHH
Confidence 4443332211 11 1223344455555555666666
No 344
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.59 E-value=8.8e-13 Score=117.36 Aligned_cols=156 Identities=16% Similarity=0.144 Sum_probs=123.3
Q ss_pred CCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHH----HhhcCcee
Q 015435 75 VGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKV----FTLAGLSV 150 (407)
Q Consensus 75 ~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~----~~~~G~~~ 150 (407)
+...-|.++++.+--+. -- +.++||+.|+..+ ++...++||.|+....-|.+.... ++..|+++
T Consensus 62 PT~~vlE~RiAaLEGG~--------aa--~a~aSG~AA~~~a--i~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v 129 (426)
T COG2873 62 PTTDVLEERIAALEGGV--------AA--LAVASGQAAITYA--ILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEV 129 (426)
T ss_pred chHHHHHHHHHHhhcch--------hh--hhhccchHHHHHH--HHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEE
Confidence 34677888888877332 23 3489999999999 577789999999999888776554 45789999
Q ss_pred eEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCc
Q 015435 151 KTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDA 230 (407)
Q Consensus 151 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~ 230 (407)
+.++- .|++.++++++ ++++++++ -+-.||.+.++ |+++|+++|+++|+.+|+|..+..-..
T Consensus 130 ~fvd~-------~d~~~~~~aI~--~nTkavf~-EtigNP~~~v~---Die~ia~iAh~~gvpliVDNT~atpyl----- 191 (426)
T COG2873 130 RFVDP-------DDPENFEAAID--ENTKAVFA-ETIGNPGLDVL---DIEAIAEIAHRHGVPLIVDNTFATPYL----- 191 (426)
T ss_pred EEeCC-------CCHHHHHHHhC--cccceEEE-EeccCCCcccc---CHHHHHHHHHHcCCcEEEecCCCccee-----
Confidence 99943 37899999999 88999999 77899999976 689999999999999999998753221
Q ss_pred hhHHHHHHHHcCCcEEEEEecCccccccCCCcceeE
Q 015435 231 DAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALS 266 (407)
Q Consensus 231 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 266 (407)
++ +-.....|+++|.||.+|..|--+|.++
T Consensus 192 ----~r--P~~hGADIVvHS~TK~igGhGt~iGG~i 221 (426)
T COG2873 192 ----CR--PIEHGADIVVHSATKYIGGHGTAIGGVI 221 (426)
T ss_pred ----cc--hhhcCCCEEEEeecccccCCccccceEE
Confidence 11 1123457889999999999998888884
No 345
>PLN02590 probable tyrosine decarboxylase
Probab=99.59 E-value=1.7e-12 Score=126.40 Aligned_cols=337 Identities=11% Similarity=0.103 Sum_probs=200.2
Q ss_pred cccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCC-----CCceEEeecCCcccHHHHHHHHHHh
Q 015435 48 PLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIK-----DNRVTTVQCLSGTGSLRVGAEFLAR 122 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~-----~~~i~~~~t~g~t~a~~~~~~~~~~ 122 (407)
+.+..++..++.... ......|...+...++.+.+.+|+....+.+-. ...-++ |+|||+++..++...+.
T Consensus 141 ~~~~~~lgd~l~sa~--n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~--~sGgSeAnl~al~aAR~ 216 (539)
T PLN02590 141 TSVAGFLGEMLNAGL--SVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVI--QGTGCEAVLVVVLAARD 216 (539)
T ss_pred CcHHHHHHHHHHHhc--ccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEE--cCchHHHHHHHHHHHHH
Confidence 445555555555554 222344545556677888888887444333210 123677 99999999777533332
Q ss_pred h--c-------CCCeEEecCCCCCChHHHHhhcCc---eeeEEEeecCCCCCcChhhHHHHHHcC---CCCcEEEEecCC
Q 015435 123 H--Y-------HQLTIYIPQPTWGNHPKVFTLAGL---SVKTYRYYDPATRGLNFQGLLEDLRAA---PSGAIVLLHACA 187 (407)
Q Consensus 123 ~--~-------~gd~Vi~~~p~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~v~i~~~p 187 (407)
. . +.-.|++++.+|.+..+++..+|+ +++.+|++...++.+|++.|+++|.+. ...+.+++-+-.
T Consensus 217 ~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaG 296 (539)
T PLN02590 217 RILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVG 296 (539)
T ss_pred HHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 1 0 111455677788899999999998 588898842245789999999999642 234666665667
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHc-CCcEEEEEecCccccccCCCcceeE
Q 015435 188 HNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVAD-GGECLVAQSYAKNMGLYGERVGALS 266 (407)
Q Consensus 188 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~ 266 (407)
...||. .+++++|+++|++||+|+.+|.||.++..-.. ..+.+... ....-+...++|.+. ....+|.+
T Consensus 297 TT~tGa---iDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~-----~~r~~~~Gie~ADSit~D~HK~l~-~p~~cg~l- 366 (539)
T PLN02590 297 TTSSAA---VDPLVPLGNIAKKYGIWLHVDAAYAGNACICP-----EYRKFIDGIENADSFNMNAHKWLF-ANQTCSPL- 366 (539)
T ss_pred CCCCcc---cCCHHHHHHHHHHhCCeEEEecchhhhhhcCh-----hhHHHhcCCccCCEEEECchhhcC-cCcCEEEE-
Confidence 777888 77899999999999999999999988764311 12222221 223345567899876 44777887
Q ss_pred EeecChhhH-HHH---HHHHhhhh-------hc--ccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHH
Q 015435 267 IVCKTEDVA-SRV---ESQLKLVI-------RP--MYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLF 333 (407)
Q Consensus 267 ~v~~~~~~~-~~~---~~~~~~~~-------~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 333 (407)
+++++... +.+ ..++.... .. +....+.- .. +++++-. ++..=.+.+.+..++..+..+++.
T Consensus 367 -lvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr-~r-aLklW~~--lr~~G~~G~~~~i~~~~~lA~~~~ 441 (539)
T PLN02590 367 -WVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRR-FR-SLKLWMV--LRLYGSENLRNFIRDHVNLAKHFE 441 (539)
T ss_pred -EecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCc-hH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67765322 111 11111000 00 01111111 11 1111110 000112456777788888999999
Q ss_pred HHHHhcCCCCCccccc-CCceeEEec--C--CCH--------HHHHHhHhhccEEEcCC---C----eEEecC--CCCCC
Q 015435 334 DALSARGTPGDWSHII-KQIGMFTFT--G--LNS--------EQVAFMTKEYHIYMTSD---G----RISMAG--LSSKT 391 (407)
Q Consensus 334 ~~l~~~~~~~~~~~~~-~~~~~~~~~--~--~~~--------~~~~~~l~~~gi~~~~g---g----Ris~~~--~~~e~ 391 (407)
+.+++.+. +++.. +.-+.+.|. + .+. +...++.+...+++.+. | |+++.. .++++
T Consensus 442 ~~l~~~~~---fel~~~~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~d 518 (539)
T PLN02590 442 DYVAQDPS---FEVVTTRYFSLVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKH 518 (539)
T ss_pred HHHhcCCC---eEEecCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHH
Confidence 99988753 66543 444444443 1 121 12233444445555553 3 998865 35688
Q ss_pred hhHHHHHHHHHHHhh
Q 015435 392 VPHLTDAIHAAVTRM 406 (407)
Q Consensus 392 i~~~~~~l~~~l~~~ 406 (407)
++.+++.|.+..+++
T Consensus 519 v~~~~~~i~~~a~~~ 533 (539)
T PLN02590 519 VTEAWQIIQKHASKF 533 (539)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999877654
No 346
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.59 E-value=1.8e-13 Score=128.82 Aligned_cols=309 Identities=15% Similarity=0.093 Sum_probs=178.0
Q ss_pred cccchhHHHHHHHHhccc-cc--cccCCC--CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec-CCcccHHHHHHHHHH
Q 015435 48 PLVLNVVRKAEQLLVNDQ-SR--VKEYLP--IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC-LSGTGSLRVGAEFLA 121 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~-~~--~~~y~~--~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t-~g~t~a~~~~~~~~~ 121 (407)
|.|.++-.++.+++.+.. .. ..++++ ..-+.+.|+.+++++ +.. ++.+|++ + .|+|.+++.++ ..
T Consensus 9 pGP~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~-~~~----~~~~v~f--~~gs~T~a~~~~~--~~ 79 (361)
T TIGR01366 9 SGPSKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELF-SLP----DGYEVIL--GNGGATAFWDAAT--FG 79 (361)
T ss_pred CCCcCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHh-CCC----CCceEEE--ECCchhHHHHHHH--Hh
Confidence 445555555555554110 00 123333 234777889999988 431 1246777 6 55999999994 44
Q ss_pred hhcCCCeEEecCCCCC-ChHHHHhh--cCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHH
Q 015435 122 RHYHQLTIYIPQPTWG-NHPKVFTL--AGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLE 198 (407)
Q Consensus 122 ~~~~gd~Vi~~~p~y~-~~~~~~~~--~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~ 198 (407)
.+.+ +.+++..-.|. .+...... .+.++..++. +++..++. .+. ++++++.+ ++..|.||+..+.
T Consensus 80 l~~~-~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~-----~~~--~~~~lV~~-~h~et~tG~~~pi- 147 (361)
T TIGR01366 80 LIEK-KSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTA--DPGSAPEP-----QAD--PGVDVIAW-AHNETSTGVAVPV- 147 (361)
T ss_pred cccc-cccEEecCHHHHHHHHHHHhhhccCCceEEec--CCCCCCCC-----ccC--CCCCEEEE-cccCCccceeccc-
Confidence 3432 33333333343 23333333 1236777766 33333333 222 56788777 7789999998764
Q ss_pred HHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHH
Q 015435 199 QWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRV 278 (407)
Q Consensus 199 ~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~ 278 (407)
++| ++++|+++|+|.+.+ +.....+ +. ...++++|..|.++.+|- ++.+ .-+++..+++
T Consensus 148 --~~I---~~~~g~~~iVDavqs-~g~~~id-----v~------~~D~~~~s~~K~lg~~~G-l~~~---~~s~~~~~~~ 206 (361)
T TIGR01366 148 --RRP---EGSDDALVVIDATSG-AGGLPVD-----IA------ETDVYYFAPQKNFASDGG-LWLA---IMSPAALERI 206 (361)
T ss_pred --ccc---cccCCCeEEEEcCcc-ccCCCCC-----HH------HCCEEEEEchhhcCCCCc-eEEE---EECHHHHhhh
Confidence 444 588999999999844 3332221 11 135678999999987641 2222 3344433333
Q ss_pred HHH----------Hh--hhhh----cc-cCCCChhHHHHHHHHhcChhhHHhHHH-HHHHHHHHHHHHHHHHHHHHHhcC
Q 015435 279 ESQ----------LK--LVIR----PM-YSSPPIHGASIVATILKDSTMYKEWTL-ELKAMADRIISMRQQLFDALSARG 340 (407)
Q Consensus 279 ~~~----------~~--~~~~----~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~ 340 (407)
... +. .... .. ..+++.....++..+++... +. .++...+++++..+++++.+++.+
T Consensus 207 ~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~-----~~gg~e~~~~r~~~l~~~l~~~l~~~~ 281 (361)
T TIGR01366 207 EAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMN-----GNGGLDWAVARTADSSSRLYSWAQERP 281 (361)
T ss_pred hcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHH-----HccCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 211 00 0000 11 22334443334444443221 11 256777889999999999999887
Q ss_pred CCCCcccc-------cCCceeEEec-CCCHHHHHHhHhhccEEEcCCC--------eEEecC-CCCCChhHHHHHHHHHH
Q 015435 341 TPGDWSHI-------IKQIGMFTFT-GLNSEQVAFMTKEYHIYMTSDG--------RISMAG-LSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 341 ~~~~~~~~-------~~~~~~~~~~-~~~~~~~~~~l~~~gi~~~~gg--------Ris~~~-~~~e~i~~~~~~l~~~l 403 (407)
. +... .+..+.+.+. +++.+.+...|+++||.+.++. |||+.+ .+.+|+++++++|++++
T Consensus 282 ~---~~~~~~~~~~~s~~v~~v~~~~g~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~ 358 (361)
T TIGR01366 282 Y---ATPFVTDPGKRSQVVGTIDFVDDIDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVV 358 (361)
T ss_pred C---cccCCCChhhcccceEEEECCCccCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 3 2211 1122334443 4577777776777899998761 999876 67899999999999998
Q ss_pred Hhh
Q 015435 404 TRM 406 (407)
Q Consensus 404 ~~~ 406 (407)
+++
T Consensus 359 ~~~ 361 (361)
T TIGR01366 359 ERL 361 (361)
T ss_pred hhC
Confidence 875
No 347
>PRK15029 arginine decarboxylase; Provisional
Probab=99.59 E-value=1.5e-13 Score=137.41 Aligned_cols=190 Identities=16% Similarity=0.149 Sum_probs=125.0
Q ss_pred CCC-cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeE
Q 015435 74 IVG-LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKT 152 (407)
Q Consensus 74 ~~g-~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~ 152 (407)
+.| +.+..+.+|+.+ +.. .-.++ |+|+|.++.++ +++.+.+||+|+++..+|.+....+...|+++++
T Consensus 203 p~G~I~eAq~~aA~~f-gA~------~t~Fl--vNGST~gn~a~--i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvy 271 (755)
T PRK15029 203 HTGAFGESEKYAARVF-GAD------RSWSV--VVGTSGSNRTI--MQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVY 271 (755)
T ss_pred CCcHHHHHHHHHHHHh-CCC------cEEEE--eCChhHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEE
Confidence 344 455555555555 652 34555 99999999988 5677899999999999999999999999999999
Q ss_pred EEeecCCC----CCcC-----hhhHHHHHHcCCCCc--------EEEEecCCCCCC--CCCCCHHHHHHHHHHHHHcCce
Q 015435 153 YRYYDPAT----RGLN-----FQGLLEDLRAAPSGA--------IVLLHACAHNPT--GVDPTLEQWEQIRQLMRSKGLL 213 (407)
Q Consensus 153 v~~~~~~~----~~~d-----~~~l~~~i~~~~~~~--------~v~i~~~p~NPt--G~~~~~~~l~~i~~~~~~~~~~ 213 (407)
++-.- +. .+++ ++.+++++.+.|..+ ++++ . ||| |+++ ++++|+++|+++|+.
T Consensus 272 l~P~~-~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvl-t---~PTY~Gv~~---di~~I~~~~h~~~~~ 343 (755)
T PRK15029 272 MVPSR-NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVV-T---NCTYDGVCY---NAKEAQDLLEKTSDR 343 (755)
T ss_pred ecccc-cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEE-E---CCCCcceee---CHHHHHHHHHhcCCe
Confidence 86421 12 2344 899999998766544 6666 3 455 8876 578888889999999
Q ss_pred eeecccccc-ccCCCCCchhHHHHHHH-H-cCCcEEEEEecCccccccCCCcceeEEeecCh--hh-HHHHHHHHhhh
Q 015435 214 PFFDSAYQG-FASGSLDADAQSVRMFV-A-DGGECLVAQSYAKNMGLYGERVGALSIVCKTE--DV-ASRVESQLKLV 285 (407)
Q Consensus 214 li~D~~y~~-~~~~~~~~~~~~~~~~~-~-~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~--~~-~~~~~~~~~~~ 285 (407)
|++||||.. |.+.+.-+...++..-. . .+..++++.|.+|.+ +++.-|.+. ...+. .+ .+++...+...
T Consensus 344 llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~L-Hv~~~~~~id~~r~~~~l~~~ 418 (755)
T PRK15029 344 LHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYI-HVREGRGAINFSRFNQAYMMH 418 (755)
T ss_pred EEEECccccccccCccccccccccccccccCCCceEEEEchhhcc--cchhhhhhh-eeCCCccccCHHHHHHHHHHH
Confidence 999999854 44432111111110000 1 223459999999997 456555443 44333 11 24455544433
No 348
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.58 E-value=9.3e-14 Score=131.77 Aligned_cols=280 Identities=15% Similarity=0.096 Sum_probs=168.1
Q ss_pred CcHHHHHHHHHHHhCCCCCCCCCCceEEeecC-CcccHHHHHHHHHHhhcC-CCeEEecCCCCCC-hHH-HHhhcCc-ee
Q 015435 76 GLVDFNKLSAKLILGADSPAIKDNRVTTVQCL-SGTGSLRVGAEFLARHYH-QLTIYIPQPTWGN-HPK-VFTLAGL-SV 150 (407)
Q Consensus 76 g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~-g~t~a~~~~~~~~~~~~~-gd~Vi~~~p~y~~-~~~-~~~~~G~-~~ 150 (407)
-+.+.|+.+++++ +.. ++++|++ +. |+|+++++++ ...+.+ ++.|+. .-.|.. +.. +.+..|+ ++
T Consensus 49 ~~~~~r~~l~~l~-~~~----~~~~v~~--~~gs~T~~~~~~~--~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v 118 (378)
T PRK03080 49 LLKRVIEGTRELL-SLP----EGYEVGI--VPGSDTGAWEMAL--WSLLGARRVDHLA-WESFGSKWATDVVKQLKLEDP 118 (378)
T ss_pred HHHHHHHHHHHHh-CCC----CCceEEE--ECCchHHHHHHHH--HhcCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCc
Confidence 4677888888887 431 1257888 75 8999999995 444553 344544 333432 222 2256788 88
Q ss_pred eEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCc
Q 015435 151 KTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDA 230 (407)
Q Consensus 151 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~ 230 (407)
+.++. +++..+|+++++ . ++.+.+ ++.+|.||+..+ +++|++ +++|+++++|.+.+ ++..+.+
T Consensus 119 ~~~~~--~~g~~~d~~~i~------~-~~~V~~-~h~~t~tG~~~p---i~~I~~--~~~g~~~vVDa~qs-~G~~pid- 181 (378)
T PRK03080 119 RVLEA--DYGSLPDLSAVD------F-DRDVVF-TWNGTTTGVRVP---VARWIG--ADREGLTICDATSA-AFALPLD- 181 (378)
T ss_pred eEecc--CCCCCCCHhhcC------C-CCCEEE-EecCCccceecc---chhhcc--ccCCCeEEEecccc-cccCCCC-
Confidence 88877 445567766532 1 345555 778999999775 667766 78999999999754 4332221
Q ss_pred hhHHHHHHHHcCCcEEEEEecCccccc-cCCCcceeEEeecChhhHHHHHHHH------------------hhhhhccc-
Q 015435 231 DAQSVRMFVADGGECLVAQSYAKNMGL-YGERVGALSIVCKTEDVASRVESQL------------------KLVIRPMY- 290 (407)
Q Consensus 231 ~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~v~~~~~~~~~~~~~~------------------~~~~~~~~- 290 (407)
+.. -.+++.|..|.++. +| +|++ +.+ ++..+++.... .......+
T Consensus 182 ----v~~------iD~~~~s~~K~l~~P~G--~g~l--~v~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 246 (378)
T PRK03080 182 ----WSK------LDVYTFSWQKVLGGEGG--HGMA--ILS-PRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTI 246 (378)
T ss_pred ----HHH------CcEEEEehhhhCCCCCc--eEEE--EEC-HHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcc
Confidence 111 25788889998863 45 6777 344 44444433211 00000111
Q ss_pred CCCChhHHHHHHHHhcChhhHHhHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc----CCc-eeEEec--C---
Q 015435 291 SSPPIHGASIVATILKDSTMYKEWTL-ELKAMADRIISMRQQLFDALSARGTPGDWSHII----KQI-GMFTFT--G--- 359 (407)
Q Consensus 291 ~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~----~~~-~~~~~~--~--- 359 (407)
.+++..+..++..+++... +. ..++.+++.+++.+++++.+++.+. +.... ..+ +.+.+. +
T Consensus 247 ~tp~i~~i~~l~~al~~l~-----~~gG~e~i~~r~~~l~~~l~~~l~~~~~---~~~~~~~~~~~s~~i~~~~~~~~~~ 318 (378)
T PRK03080 247 NTPSMLTVEDYLDQLDWAN-----SIGGLDALIARTAANASVLYDWAEKTPW---ATPLVADPATRSNTSVTLDFVDAQA 318 (378)
T ss_pred cCchHHHHHHHHHHHHHHH-----HcCCHHHHHHHHHHHHHHHHHHHHhCCC---cccccCCccccCccEEEEEcCCchH
Confidence 1334444433343443211 12 3677889999999999999998763 22221 112 334332 2
Q ss_pred -CCHHHHHHhHhhccEEEcCC------C--eEEecC-CCCCChhHHHHHHHHHHHhh
Q 015435 360 -LNSEQVAFMTKEYHIYMTSD------G--RISMAG-LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 360 -~~~~~~~~~l~~~gi~~~~g------g--Ris~~~-~~~e~i~~~~~~l~~~l~~~ 406 (407)
.+.+.+..+++ +++.+..| + |+|+.. .+++|+++++++|+++++++
T Consensus 319 ~~~~~~~~~l~~-~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 374 (378)
T PRK03080 319 AVDAAAVAKLLR-ENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFERL 374 (378)
T ss_pred HHHHHHHHHHHH-cCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHH
Confidence 22344555655 47776542 2 999765 57799999999999988764
No 349
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.56 E-value=5e-14 Score=131.26 Aligned_cols=278 Identities=14% Similarity=0.111 Sum_probs=160.7
Q ss_pred cCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccc-cCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec
Q 015435 28 DTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVK-EYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC 106 (407)
Q Consensus 28 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t 106 (407)
.++++++|+..|....+.| ..++++.+++.+++. ...... ......-..++.+.+.+.. +. ..+.+.+ +
T Consensus 13 ~dG~~~lD~~~~~~~~~lG-h~~p~i~~ai~~~~~-~~~~~~~~~~~~~~~~~la~~L~~~~-p~-----~~~~v~f--~ 82 (339)
T PF00202_consen 13 VDGREYLDFMSGYGSVNLG-HNHPEIAEAIAEQAN-KLNYVSFSGFTHPEAAELAEKLAELF-PG-----GLDRVFF--A 82 (339)
T ss_dssp TTSEEEEESSHHHHTTTT--BT-HHHHHHHHHHHH-HCSSCSTTTSEEHHHHHHHHHHHHHS-ST-----TEEEEEE--E
T ss_pred CCCCEEEECCCCccceecC-CCccccchhHHHHhh-hcccccccceeccchhhhhhhhhhcc-cc-----ccceeee--c
Confidence 4568999999886655566 556677777777765 111111 1111112334555555544 21 1278999 9
Q ss_pred CCcccHHHHHHHHHH------hhcCCCeEEecCCCCCChHHHHhhc-------------CceeeEEEeecCCC---CCcC
Q 015435 107 LSGTGSLRVGAEFLA------RHYHQLTIYIPQPTWGNHPKVFTLA-------------GLSVKTYRYYDPAT---RGLN 164 (407)
Q Consensus 107 ~g~t~a~~~~~~~~~------~~~~gd~Vi~~~p~y~~~~~~~~~~-------------G~~~~~v~~~~~~~---~~~d 164 (407)
+||++|++.++++.. ......+|+...-+|++........ ...+..+|..+... ..-.
T Consensus 83 ~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 162 (339)
T PF00202_consen 83 NSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQAC 162 (339)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHH
T ss_pred cCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHH
Confidence 999999999998887 3334568998888888654422211 11234454421110 0001
Q ss_pred hhhHHHHHHc--CCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHc
Q 015435 165 FQGLLEDLRA--APSGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVAD 241 (407)
Q Consensus 165 ~~~l~~~i~~--~~~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~ 241 (407)
.+.+++.+.+ .++..++++-+- +...|.. ++++.+++|.++|++||+++|+||+..+++..+. .+....+. -
T Consensus 163 ~~~~~~~~~~~~~~~iaavivEPi-~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~---~~a~~~~g-v 237 (339)
T PF00202_consen 163 LNALEELIAALNADEIAAVIVEPI-QGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGK---FFASEHYG-V 237 (339)
T ss_dssp HHHHHHHHHHHHGGGEEEEEEESS-BTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSS---SSGHHHHT-S
T ss_pred HHHHHHHHHhhcCCcEEEEEEecc-ccccCccccccchhhehcccccccccceecccccccccccCC---ccceeccc-c
Confidence 1123333221 134456666443 3334544 6788999999999999999999999999987653 33333332 2
Q ss_pred CCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHH
Q 015435 242 GGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAM 321 (407)
Q Consensus 242 ~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 321 (407)
..++++ ++|.++ .|+++|.+ ++. +++.+.+.......+.+.+++++.++.+.|+-.. -+.+
T Consensus 238 ~PDiv~---~gK~l~-gG~p~sav--~~~-----~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~--------~~~~ 298 (339)
T PF00202_consen 238 DPDIVT---FGKGLG-GGLPISAV--LGS-----EEIMEAFQPGSHGSTFGGNPLSCAAALATLEILE--------EEDL 298 (339)
T ss_dssp SSSEEE---EEGGGG-TTSSEEEE--EEE-----HHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHH--------HTTH
T ss_pred cCcccc---cccchh-hhhhcccc--ccc-----chhhccccccccccccccchHhhhhhhhHHHhhc--------cHHH
Confidence 233443 569998 67999999 576 5566655433333455678888888887776332 1123
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 015435 322 ADRIISMRQQLFDALSAR 339 (407)
Q Consensus 322 ~~~~~~~~~~l~~~l~~~ 339 (407)
.++++++.+++.+.|+++
T Consensus 299 ~~~~~~~g~~l~~~L~~l 316 (339)
T PF00202_consen 299 LERVRELGERLREGLREL 316 (339)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 455555666666666543
No 350
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.56 E-value=2.6e-12 Score=123.02 Aligned_cols=211 Identities=17% Similarity=0.128 Sum_probs=135.2
Q ss_pred CCeeeeeeeeeecCCCccc-cchhHHHHHHHHhccccccccCCC-----CCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 31 PVKLNLGVGAYRTEEGKPL-VLNVVRKAEQLLVNDQSRVKEYLP-----IVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~y~~-----~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
+.+||...-++.+|.|.+. +..+++++.+.+. .. ....|.- ..-+..+++.+++++ +. +..++
T Consensus 74 r~vinatg~v~~tNlg~s~l~~~vieAv~~~~~-~y-~~l~~~l~~g~~g~r~~~le~~lA~l~-ga-------e~alv- 142 (454)
T TIGR00474 74 RRVINATGVVLHTNLGRAPLAEEAIEAVTDAAR-GY-SNLEYDLETGKRGSRYSHVEGLLCELT-GA-------EDALV- 142 (454)
T ss_pred cceeCCCCcEEeccCCCCCCCHHHHHHHHHHHh-cc-cchhccccccccchHHHHHHHHHHHHh-CC-------CcEEE-
Confidence 5677866556667766554 5566666655554 11 1112211 112578888899888 53 45667
Q ss_pred ecCCcccHHHHHHHHHHhhcCCCeEEecCCCCC---C---hHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCC
Q 015435 105 QCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWG---N---HPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSG 178 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~---~---~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 178 (407)
+++++.|+.+++ ..+.+||+|++++..|. + ....++..|++++.++.+ ...++++++++++ +++
T Consensus 143 -v~sg~aAi~l~l---~~l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~----~~~~l~dle~aI~--~~T 212 (454)
T TIGR00474 143 -VNNNAAAVLLAL---NTLAKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTT----NRTHLKDYEDAIT--ENT 212 (454)
T ss_pred -ECCHHHHHHHHH---HHhCCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCC----CCCCHHHHHHhcC--cCC
Confidence 888889987773 45789999999986542 1 234566789999998662 2358899999987 678
Q ss_pred cEEEEecCCCCCC--CCCCCHHHHHHHHHHHHHcCceeeeccccccccCCC---CCchhHHHHHHHHcCCcEEEEEecCc
Q 015435 179 AIVLLHACAHNPT--GVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGS---LDADAQSVRMFVADGGECLVAQSYAK 253 (407)
Q Consensus 179 ~~v~i~~~p~NPt--G~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~s~sK 253 (407)
+++++ .+++|++ |.. ..-++++|+++|++||+++++|.....+...+ .. ..+.+..... ....++++|.+|
T Consensus 213 ~lv~~-~h~sN~~~~G~~-~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~-~~p~~~~~~~-~GaDiv~fSg~K 288 (454)
T TIGR00474 213 ALLLK-VHTSNYRIVGFT-EEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLP-DEPTVQEVIA-AGVDLVTFSGDK 288 (454)
T ss_pred EEEEE-EccCcccccCCC-CCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCC-CCcccccHhH-cCCCEEEecCcc
Confidence 88777 7789996 531 12368899999999999999998633221100 00 0001111111 234588999999
Q ss_pred cccccCCCcceeEEeec
Q 015435 254 NMGLYGERVGALSIVCK 270 (407)
Q Consensus 254 ~~~~~G~r~G~~~~v~~ 270 (407)
.++.| ..|++ +++
T Consensus 289 ~LgGp--~~G~i--~g~ 301 (454)
T TIGR00474 289 LLGGP--QAGII--VGK 301 (454)
T ss_pred ccCCC--eEEEE--EEC
Confidence 98644 46777 455
No 351
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.53 E-value=1.2e-12 Score=129.72 Aligned_cols=169 Identities=19% Similarity=0.123 Sum_probs=112.1
Q ss_pred CCC-cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHH-HhhcCceee
Q 015435 74 IVG-LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKV-FTLAGLSVK 151 (407)
Q Consensus 74 ~~g-~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~-~~~~G~~~~ 151 (407)
..| +.+..+.+|+.+ +.+ .-.++ ++|+|.++.++ +.+.+.+||.|++...+|.+.... +...|+.++
T Consensus 172 ~eG~i~eAq~~AA~~f-gAd------~tyFl--vNGTS~gn~a~--i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PV 240 (720)
T PRK13578 172 HEGAAKDAQKHAAKVF-NAD------KTYFV--LNGTSASNKVV--TNALLTPGDLVLFDRNNHKSNHHGALIQAGATPV 240 (720)
T ss_pred CChHHHHHHHHHHHHh-CCC------ceEEE--eCChhHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEE
Confidence 345 444455555555 652 34555 99999999998 566789999999999999998885 889999999
Q ss_pred EEEeecCCCC----CcChhh-----HHHHHHcC-CC-------CcEEEEecCCCCCC--CCCCCHHHHHHHHHH-HHHcC
Q 015435 152 TYRYYDPATR----GLNFQG-----LLEDLRAA-PS-------GAIVLLHACAHNPT--GVDPTLEQWEQIRQL-MRSKG 211 (407)
Q Consensus 152 ~v~~~~~~~~----~~d~~~-----l~~~i~~~-~~-------~~~v~i~~~p~NPt--G~~~~~~~l~~i~~~-~~~~~ 211 (407)
++.-.- +.+ +++++. +++++.+. +. .+++++ .||| |++++ +++|+++ |++++
T Consensus 241 Yl~P~~-n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvi----t~pTYdG~~yd---i~~I~~~~~h~~~ 312 (720)
T PRK13578 241 YLETAR-NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVI----QLGTYDGTIYN---ARQVVDKIGHLCD 312 (720)
T ss_pred Eeeccc-cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEE----ECCCCcceeec---HHHHHHHhhccCC
Confidence 987531 222 446544 88888765 22 245566 3555 99875 6777777 68888
Q ss_pred ceeeeccccccc-cCCCCCchhHHH-HHHHHcCCcEEEEEecCccccccCCCcce
Q 015435 212 LLPFFDSAYQGF-ASGSLDADAQSV-RMFVADGGECLVAQSYAKNMGLYGERVGA 264 (407)
Q Consensus 212 ~~li~D~~y~~~-~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 264 (407)
.|++||||... .+.+.-++.+.. ......+..++++-|.+|.++ ++--+.
T Consensus 313 -~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~--alTQaS 364 (720)
T PRK13578 313 -YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQA--GFSQTS 364 (720)
T ss_pred -cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcch--hhhhHh
Confidence 99999998544 443211111111 111222345699999999874 553333
No 352
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.52 E-value=2.9e-12 Score=122.63 Aligned_cols=286 Identities=13% Similarity=0.155 Sum_probs=176.5
Q ss_pred cccchhHHHHHHHH-hccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhc--
Q 015435 48 PLVLNVVRKAEQLL-VNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY-- 124 (407)
Q Consensus 48 ~~~~~~~~~~~~~~-~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~-- 124 (407)
+.++++..+.+... .++..+...| | +...+.+.+..++....+.+ ....-.+ |+|||+++.++....+...
T Consensus 72 ~~~~~~a~~~~~~~~~~nl~d~~~~-p--~a~~~E~~~v~~l~~l~~~~-~~~~G~~--t~GgTean~lal~aar~~~~~ 145 (460)
T COG0076 72 TRVPPVAAELLVSALNKNLGDPDES-P--AAAELEERVVNMLSDLLGAP-EEASGTF--TSGGTEANLLALLAARERWRK 145 (460)
T ss_pred CCCHHHHHHHHHHHHhhcCCCcccC-h--hHHHHHHHHHHHHHHHhCCC-CCCceEE--EcChHHHHHHHHHHHHHHHHH
Confidence 45555555554444 3222333344 3 55566666666663333332 2234567 9999999998764443321
Q ss_pred -C---C------CeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCC
Q 015435 125 -H---Q------LTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVD 194 (407)
Q Consensus 125 -~---g------d~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~ 194 (407)
. + .+|++++-.+.++.+.++.+|+....+++. +....+|++++++++.+.....+|+. ..++.+||.
T Consensus 146 ~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~-~~~~~id~~~l~~~i~~~t~~g~vV~-~aGtT~~G~- 222 (460)
T COG0076 146 RALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTV-PTDYRIDVDALEEAIDENTIGGVVVG-TAGTTDTGS- 222 (460)
T ss_pred HhhhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEec-cCccccCHHHHHHHHHhhccCceEEE-EecCCCCCc-
Confidence 1 1 169999999999999999999999999994 43688999999999984321121444 667888988
Q ss_pred CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHc-CCcEEEEEecCccccccCCCcceeEEeecChh
Q 015435 195 PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVAD-GGECLVAQSYAKNMGLYGERVGALSIVCKTED 273 (407)
Q Consensus 195 ~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~ 273 (407)
.+++++|+++|+++++++.+|.||.++...=.+.+.. +... ....-+..+++|... .-..+||+ +.+|++
T Consensus 223 --iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~----~~f~l~~vdSIt~d~HK~g~-aP~~~G~i--l~rd~e 293 (460)
T COG0076 223 --IDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGR----WDFGLEGVDSITVDGHKYGL-APIGCGVV--LFRDEE 293 (460)
T ss_pred --cCCHHHHHHHHHHcCCcEEEEccccceeecccCccch----hhcCCCCceEEEECcccccC-CCCCceEE--EEECHH
Confidence 7899999999999999999999998887521111111 1111 223345568899654 55788999 799884
Q ss_pred -hHHHHHHHHhhhhh-----cccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Q 015435 274 -VASRVESQLKLVIR-----PMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSH 347 (407)
Q Consensus 274 -~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 347 (407)
+.+.+.- ...+.. ..+...+..+-.++..+.. ++..-.+...++.++..+..+++.+.+++.+. ++.
T Consensus 294 ~l~~~~~~-~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~---l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~---~e~ 366 (460)
T COG0076 294 ALRRILIF-ADYYLPGGGIPNFTILGSRPGRQALALYAN---LRRLGREGYRKLLDRTLELARYLAEELEKLGD---FEL 366 (460)
T ss_pred Hhhhhhhc-ccccCCCCCcCceeEeeccchHHHHHHHHH---HHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCC---cEe
Confidence 3332221 111111 1111222333222221111 00011255677888888999999999999874 665
Q ss_pred cc-CCceeEEec
Q 015435 348 II-KQIGMFTFT 358 (407)
Q Consensus 348 ~~-~~~~~~~~~ 358 (407)
.. |..+.+.|.
T Consensus 367 ~~~p~l~~V~fr 378 (460)
T COG0076 367 VNEPELPIVAFR 378 (460)
T ss_pred ecCCccceEEEE
Confidence 54 555555554
No 353
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.52 E-value=1.3e-12 Score=129.32 Aligned_cols=169 Identities=12% Similarity=0.115 Sum_probs=113.2
Q ss_pred CCC-cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeE
Q 015435 74 IVG-LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKT 152 (407)
Q Consensus 74 ~~g-~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~ 152 (407)
..| +.+..+.+|+.+ +.+ .-.++ |+|+|.++.++ +.+.+.+||.|++...+|.+....+...|+.+++
T Consensus 193 ~~G~i~eAe~~AA~~f-gAd------~tyfv--vNGTS~~n~av--~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVY 261 (714)
T PRK15400 193 HSGPHKEAEEYIARVF-NAD------RSYMV--TNGTSTANKIV--GMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIY 261 (714)
T ss_pred CChHHHHHHHHHHHHh-CCC------cEEEE--eCchHHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEE
Confidence 344 445555555655 652 34555 99999999988 4666889999999999999999999999999999
Q ss_pred EEeecCCCC----CcC-----hhhHHHHHHcCCCCc---EEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeecccc
Q 015435 153 YRYYDPATR----GLN-----FQGLLEDLRAAPSGA---IVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAY 220 (407)
Q Consensus 153 v~~~~~~~~----~~d-----~~~l~~~i~~~~~~~---~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y 220 (407)
++.. .+.+ +++ ++.+++++.+.+..+ .+++ .+| +--|++++ +++|.+.|+.++ |++||||
T Consensus 262 l~P~-rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vi-t~p-TYdG~~yd---~~~I~~~~~~~~--ilvDEAw 333 (714)
T PRK15400 262 FRPT-RNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVI-TNS-TYDGLLYN---TDFIKKTLDVKS--IHFDSAW 333 (714)
T ss_pred eccc-ccccCCccCCCccccCHHHHHHHHHhCccccCccEEEE-ECC-CCccEecC---HHHHHHHhCCCC--EEEEccc
Confidence 8653 1222 345 899999998765433 4555 332 23499886 567777788887 6899998
Q ss_pred ccc-cCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcc
Q 015435 221 QGF-ASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVG 263 (407)
Q Consensus 221 ~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 263 (407)
.+. .+.+.-++..++....+.++.++++.|.+|.++ ++.-+
T Consensus 334 gah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL~--alTQa 375 (714)
T PRK15400 334 VPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLA--AFSQA 375 (714)
T ss_pred hhhhccCcccCCcChhhcCCCCCCceEEEEchhhccc--chhHH
Confidence 654 343221122333211112256699999999874 55333
No 354
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.50 E-value=1.7e-12 Score=121.35 Aligned_cols=282 Identities=14% Similarity=0.093 Sum_probs=168.5
Q ss_pred cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhh-cCCCeEEecCCCCCCh-H-HHHhhcCc-eeeE
Q 015435 77 LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARH-YHQLTIYIPQPTWGNH-P-KVFTLAGL-SVKT 152 (407)
Q Consensus 77 ~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~-~~gd~Vi~~~p~y~~~-~-~~~~~~G~-~~~~ 152 (407)
+.+..+.+.+.+ +... +.+-+++ +.|||.+++++ +.+.+ .+|++|++.. .|..- . ++++..|+ ++..
T Consensus 41 ~~e~~~~L~~l~-~~~~---~~~v~~l--~GsGT~a~Eaa--~~nl~~~~g~~vLv~g-~FG~r~~~eia~~~g~~~v~~ 111 (374)
T TIGR01365 41 LAEAIKKTREML-GVPA---DYLIGIV--PASDTGAVEMA--LWSMLGCRGVDVLAWE-SFGKGWVTDVTKQLKLPDVRV 111 (374)
T ss_pred HHHHHHHHHHHh-CCCC---CcEEEEE--CCchHHHHHHH--HHHcCCCCCCeEEEEC-HHHHHHHHHHHHhcCCCCcEE
Confidence 445566666655 4210 0122555 99999999999 46667 4788988865 44322 4 77888999 4777
Q ss_pred EEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHH-cCceeeeccccccccCCCCCch
Q 015435 153 YRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRS-KGLLPFFDSAYQGFASGSLDAD 231 (407)
Q Consensus 153 v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~-~~~~li~D~~y~~~~~~~~~~~ 231 (407)
+.. +++..+++++++. ... +++ ++..+.||+..+ +++++ ++ ++.++|+|.+- .++..+.+.+
T Consensus 112 l~~--~~g~~~~~~~ve~------~~~-v~~-vhnETSTGv~np---v~~i~---~~~~~~lliVDavS-s~g~~~l~~d 174 (374)
T TIGR01365 112 LEA--EYGKLPDLKKVDF------KND-VVF-TWNGTTSGVRVP---NGDFI---PADREGLTICDATS-AAFAQDLDYH 174 (374)
T ss_pred EcC--CCCCCCCHHHcCC------CCC-EEE-ecCCCchheecc---ccccc---cccCCCcEEEEccc-hhcCCCCChh
Confidence 765 6778899998873 122 444 555778899765 44443 33 58999999974 3443322111
Q ss_pred hHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHH---------HHh---------hhh-hcccCC
Q 015435 232 AQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVES---------QLK---------LVI-RPMYSS 292 (407)
Q Consensus 232 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~---------~~~---------~~~-~~~~~~ 292 (407)
.-.+++.|.-|.+++|+ .++.+ +-+++..++... .+. ... .....+
T Consensus 175 -----------~iDv~~tgsQK~L~~pp-Gls~v---~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~T 239 (374)
T TIGR01365 175 -----------KLDVVTFSWQKVLGGEG-AHGML---ILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINT 239 (374)
T ss_pred -----------HCcEEEEechhccCCCC-ceEEE---EECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCC
Confidence 24577788899998764 23344 444554444331 011 000 112224
Q ss_pred CChhHHHHHHHHhcChhhHHhHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCCcc----cccCCceeEEec-C-C-----
Q 015435 293 PPIHGASIVATILKDSTMYKEWTL-ELKAMADRIISMRQQLFDALSARGTPGDWS----HIIKQIGMFTFT-G-L----- 360 (407)
Q Consensus 293 ~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~----~~~~~~~~~~~~-~-~----- 360 (407)
++.....++..+++... ++ .++++.++++++++++++.++++|....+. ...+....+.+. + +
T Consensus 240 P~v~~l~a~~~~l~~i~-----~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~ 314 (374)
T TIGR01365 240 PSMLCVEDWLDALKWAE-----SIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDE 314 (374)
T ss_pred hHHHHHHHHHHHHHHHH-----HccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCcccccccc
Confidence 44444455554443110 12 488999999999999999999998310011 111111112221 2 3
Q ss_pred C-----HHHHHHhHhhccEEEcCCC--------eEE-ecCCCCCChhHHHHHHHHHHH
Q 015435 361 N-----SEQVAFMTKEYHIYMTSDG--------RIS-MAGLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 361 ~-----~~~~~~~l~~~gi~~~~gg--------Ris-~~~~~~e~i~~~~~~l~~~l~ 404 (407)
+ .+.+...|+++||.+.+|. ||+ ++.++.+|++.+++.|.=+.+
T Consensus 315 ~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 315 DAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFA 372 (374)
T ss_pred chhhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHh
Confidence 2 4557777777899998773 995 555888999999998864443
No 355
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.48 E-value=9.4e-12 Score=123.37 Aligned_cols=169 Identities=13% Similarity=0.107 Sum_probs=109.6
Q ss_pred CC-cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEE
Q 015435 75 VG-LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTY 153 (407)
Q Consensus 75 ~g-~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v 153 (407)
.| +.+..+.+|+.+ +.+ .-.++ |+|+|.++.++ +++.+.+||.|++...+|.+....+...|+.++++
T Consensus 194 ~G~i~eAe~~aA~~f-gAd------~tyfv--vNGTS~~n~av--~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl 262 (713)
T PRK15399 194 TGPHLEAEEYIARTF-GAE------QSYIV--TNGTSTSNKIV--GMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWL 262 (713)
T ss_pred ChHHHHHHHHHHHHh-CCC------cEEEE--eCChHHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEe
Confidence 44 445555556655 652 34555 99999999998 46678999999999999999999999999999998
Q ss_pred EeecCCCC----CcCh-----hhHHHHHHcCCCC---cEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCcee-eecccc
Q 015435 154 RYYDPATR----GLNF-----QGLLEDLRAAPSG---AIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLP-FFDSAY 220 (407)
Q Consensus 154 ~~~~~~~~----~~d~-----~~l~~~i~~~~~~---~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~l-i~D~~y 220 (407)
+-. .+.+ ++++ +.+++++.+.++. ..+++ .+| +--|++++. ++|.+.| |+.+ ++||||
T Consensus 263 ~P~-~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvi-t~p-TYdGi~yd~---~~I~~~~---g~~~ilvDEAh 333 (713)
T PRK15399 263 KPT-RNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVI-TNS-TYDGLLYNT---DWIKQTL---DVPSIHFDSAW 333 (713)
T ss_pred ccc-ccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEE-ECC-CCCceeeCH---HHHHHHh---CCCEEEEeccc
Confidence 642 1222 4455 8999999876543 35555 333 234998874 5555556 5655 699998
Q ss_pred ccc-cCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCccee
Q 015435 221 QGF-ASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGAL 265 (407)
Q Consensus 221 ~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 265 (407)
.+. .+.+.-++..++......+..++++.|.+|.+ +++.-+..
T Consensus 334 gah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL--~alTQaS~ 377 (713)
T PRK15399 334 VPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKML--AAFSQASL 377 (713)
T ss_pred hhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccc--cccchhee
Confidence 644 34322122223221001123446688999986 46644444
No 356
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.45 E-value=8.1e-12 Score=109.19 Aligned_cols=330 Identities=14% Similarity=0.136 Sum_probs=203.2
Q ss_pred CCCCeeeeeeeeeecCCCccccchhHHHHHHHHhcccc-ccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQS-RVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
.+++++||=.+-...|-| ...+.++.+..+++..-.- ....|. .-..++.+.+.+++ +- +.++- ++
T Consensus 57 eGk~ylDflsaysaVnqG-hchpki~~aLqeq~~kLtlssrafYn--d~~~~f~~~vt~lf-~~-------~kvlp--mn 123 (427)
T KOG1402|consen 57 EGKEYLDFLSAYSAVNQG-HCHPKIIKALQEQADKLTLSSRAFYN--DVLGEFAEYVTKLF-GY-------DKVLP--MN 123 (427)
T ss_pred CccchhhhhhhhhhcccC-CCCHHHHHHHHHHHhHhhhhhHHHhh--hhHHHHHHHHHHhc-Cc-------ceeee--cc
Confidence 467777776654334455 6677788877777751111 111232 23456677777766 42 56766 88
Q ss_pred CcccHHHHHHHHHHhhc------C-CCeEEecC-CCCCChHHHHhhcCce--------------eeEEEeecCCCCCcCh
Q 015435 108 SGTGSLRVGAEFLARHY------H-QLTIYIPQ-PTWGNHPKVFTLAGLS--------------VKTYRYYDPATRGLNF 165 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~------~-gd~Vi~~~-p~y~~~~~~~~~~G~~--------------~~~v~~~~~~~~~~d~ 165 (407)
-|.+|.+.+.++.+.+. | ...++++. .+|.+-.-.+-..+.+ +..+|. -|.
T Consensus 124 TGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y-------~d~ 196 (427)
T KOG1402|consen 124 TGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY-------GDA 196 (427)
T ss_pred cchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc-------CCH
Confidence 88999999999888653 3 23344433 3443221111111111 222222 278
Q ss_pred hhHHHHHHcCCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCc
Q 015435 166 QGLLEDLRAAPSGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGE 244 (407)
Q Consensus 166 ~~l~~~i~~~~~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~ 244 (407)
++++..+.+ ++.+.+++ -.-+-..|++ .++..+++..++|.+|++++|.||+..++...| +.+.... +.-..
T Consensus 197 eale~~l~~-~~vaaFiv-EPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTG---k~la~d~--env~P 269 (427)
T KOG1402|consen 197 EALEVALKS-PNVAAFIV-EPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTG---KLLACDY--ENVRP 269 (427)
T ss_pred HHHHHHhcC-CCeeEEEe-eccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccC---cEEEeeh--hhcCC
Confidence 899999884 34444444 4445566776 667799999999999999999999999998875 2332211 11122
Q ss_pred EEEEEecCccccccC-CCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHH
Q 015435 245 CLVAQSYAKNMGLYG-ERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMAD 323 (407)
Q Consensus 245 ~i~~~s~sK~~~~~G-~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 323 (407)
.+++ +.|.++ .| .+++.+ ++. +.++..+.......+++.+++++.++.+.|+-.. -+++.+
T Consensus 270 Divi--lgKalS-GG~~Pvsav--l~~-----~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~--------eekL~e 331 (427)
T KOG1402|consen 270 DIVI--LGKALS-GGVYPVSAV--LAD-----DDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIV--------EEKLVE 331 (427)
T ss_pred CeEE--Eecccc-CCeeeeEEE--Eec-----HHHHhccCCCccccccCCChHHHHHHHHHHHHHH--------HHHHHH
Confidence 2333 678887 44 477777 576 6677767666666677889999998888876432 346778
Q ss_pred HHHHHHHHHHHHHHhcCCC--CCcccccCCceeEEecCC-----C-HHH--HHHhHhhccEEEcCC-C---eEEecC-CC
Q 015435 324 RIISMRQQLFDALSARGTP--GDWSHIIKQIGMFTFTGL-----N-SEQ--VAFMTKEYHIYMTSD-G---RISMAG-LS 388 (407)
Q Consensus 324 ~~~~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~~~~-----~-~~~--~~~~l~~~gi~~~~g-g---Ris~~~-~~ 388 (407)
+.+++-+.++..|+++... .-.+.....| ++.-+.+ + .+. +-..+.+.|+..-|- | |++..- ++
T Consensus 332 ra~~lG~~l~~~L~~l~~~~p~~v~~VRGrG-l~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkptH~~IiRfaPPL~I~ 410 (427)
T KOG1402|consen 332 RAAKLGEILRDQLNKLQKKFPHVVKEVRGRG-LLNAIVINPSKTSGQDAWDVCLALKENGLLAKPTHGNIIRFAPPLVIS 410 (427)
T ss_pred HHHHHHHHHHHHHHhccccccchhheeeccc-eEEEEEeccccccchhHHHHHHcccccccccCCCCCCeEEecCCcccC
Confidence 8888889999999987532 1122233333 3433322 2 222 223446678877774 3 776542 68
Q ss_pred CCChhHHHHHHHHHHH
Q 015435 389 SKTVPHLTDAIHAAVT 404 (407)
Q Consensus 389 ~e~i~~~~~~l~~~l~ 404 (407)
++|+++.++.|+..+.
T Consensus 411 e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 411 EEDLREGIEAIEKTIA 426 (427)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 8999999999988764
No 357
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.42 E-value=1.3e-10 Score=113.31 Aligned_cols=261 Identities=12% Similarity=0.138 Sum_probs=157.7
Q ss_pred CCCCCCcHHHHHHHHHHHhCCCCC----------CC-CCCceEEeecCCcccHHHHHHHHHHhhc---------------
Q 015435 71 YLPIVGLVDFNKLSAKLILGADSP----------AI-KDNRVTTVQCLSGTGSLRVGAEFLARHY--------------- 124 (407)
Q Consensus 71 y~~~~g~~~l~~~~a~~~~~~~~~----------~~-~~~~i~~~~t~g~t~a~~~~~~~~~~~~--------------- 124 (407)
|...+...++.+.+.+|+...-+. .. +..--.+ |+|||+|+..++...+...
T Consensus 121 ~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~--tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl 198 (522)
T TIGR03799 121 IETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAF--CSGGTVANITALWVARNRLLKADGDFKGVAREGL 198 (522)
T ss_pred eecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEE--cCchHHHHHHHHHHHHHHhccccccccccccccc
Confidence 333445556667777776222110 00 1123567 9999999988864443321
Q ss_pred ---------CCCeEEecCCCCCChHHHHhhcCc---eeeEEEeecCCCCCcChhhHHHHHHcC--CC-CcEEEEecCCCC
Q 015435 125 ---------HQLTIYIPQPTWGNHPKVFTLAGL---SVKTYRYYDPATRGLNFQGLLEDLRAA--PS-GAIVLLHACAHN 189 (407)
Q Consensus 125 ---------~gd~Vi~~~p~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~i~~~--~~-~~~v~i~~~p~N 189 (407)
++..|++++-.|.+..++++..|. +++.+|. +.++.+|+++|++.+.+. .+ .+++++.+..++
T Consensus 199 ~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~--d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt 276 (522)
T TIGR03799 199 FAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKT--DANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTT 276 (522)
T ss_pred hhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEe--CCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCc
Confidence 124688888889999999998888 7899998 345789999999998631 23 344444445567
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHc-CCcEEEEEecCccccccCCCcceeEEe
Q 015435 190 PTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVAD-GGECLVAQSYAKNMGLYGERVGALSIV 268 (407)
Q Consensus 190 PtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~v 268 (407)
.||. .+++++|+++|+++|+++.+|.+|.+...-. + ..+..... .....+..+.+|.++.| ..+|.+ +
T Consensus 277 ~tGa---iDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~---~--~~r~~l~gle~aDSit~d~HK~l~~P-~g~G~l--l 345 (522)
T TIGR03799 277 ETGN---IDPLDEMADIAQELGCHFHVDAAWGGATLLS---N--TYRHLLKGIERADSVTIDAHKQLYVP-MGAGMV--L 345 (522)
T ss_pred CCCC---cCCHHHHHHHHHHcCCeEEEEchhhhHHHhC---H--HHHHHhcCchhCCEEEEChhhcCCcC-cccEEE--E
Confidence 8999 5568889999999999999999987544311 1 11111221 23456788999966533 557888 6
Q ss_pred ecChhhHHHHHHHHhhhhh-------cccC--CCChh--HHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015435 269 CKTEDVASRVESQLKLVIR-------PMYS--SPPIH--GASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALS 337 (407)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~-------~~~~--~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 337 (407)
.++++..+.+......... .... +.+.. ...++...+. ...++++.++..+.++++.+.++
T Consensus 346 vr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG--------~~G~~~ii~~~~~la~~l~~~L~ 417 (522)
T TIGR03799 346 FKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIG--------RKGYELLIDQSIEKAKYFADLIQ 417 (522)
T ss_pred EeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHHHHHHHh
Confidence 7776654332221000000 0011 11211 1222222222 14577888888999999999998
Q ss_pred hcCCCCCccccc-CCceeEEe
Q 015435 338 ARGTPGDWSHII-KQIGMFTF 357 (407)
Q Consensus 338 ~~~~~~~~~~~~-~~~~~~~~ 357 (407)
+.+. +++.. |.-+.+.|
T Consensus 418 ~~~~---~el~~~p~l~iv~F 435 (522)
T TIGR03799 418 QQPD---FELVTEPELCLLTY 435 (522)
T ss_pred hCCC---eEEecCCCccEEEE
Confidence 8743 66543 34444444
No 358
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.42 E-value=2e-10 Score=102.80 Aligned_cols=237 Identities=14% Similarity=0.191 Sum_probs=137.4
Q ss_pred CceEE-eecCCcccHHHHHHHHHHhhcCCCeEEecC-CCCCChHHHH----------hhcCceeeEEEeecCCCCCcChh
Q 015435 99 NRVTT-VQCLSGTGSLRVGAEFLARHYHQLTIYIPQ-PTWGNHPKVF----------TLAGLSVKTYRYYDPATRGLNFQ 166 (407)
Q Consensus 99 ~~i~~-~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~-p~y~~~~~~~----------~~~G~~~~~v~~~~~~~~~~d~~ 166 (407)
+..++ -|..|||+|+..+ +...+.|||+++... .-|.....++ ..+|++...+++. +++.+|++
T Consensus 70 E~ALVRpq~vSGTHAi~~~--Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~--~dg~~D~~ 145 (403)
T PF06838_consen 70 EDALVRPQFVSGTHAIALA--LFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLT--EDGTIDWE 145 (403)
T ss_dssp SEEEEETTS-SHHHHHHHH--HHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B---TTSSB-HH
T ss_pred hhhhhcccccchHHHHHHH--HHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeec--CCCCcCHH
Confidence 44444 5677899999999 577799999988654 5677666655 4578899999994 45789999
Q ss_pred hHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc--CceeeeccccccccCCCCCchhHHHHHHHHcCCc
Q 015435 167 GLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSK--GLLPFFDSAYQGFASGSLDADAQSVRMFVADGGE 244 (407)
Q Consensus 167 ~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~--~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~ 244 (407)
.++++++ +++++++|.=+....+=..++.++++++++++++. ++++++|.+|.+|+..- ++ .+-..
T Consensus 146 ~i~~~~~--~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~---EP-------~~vGA 213 (403)
T PF06838_consen 146 AIKKALK--PNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQ---EP-------TEVGA 213 (403)
T ss_dssp HHHHHHH--TTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS----G-------GGGT-
T ss_pred HHHHhhc--cCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceecccc---Cc-------cccch
Confidence 9999999 78999999766666666679999999999999875 79999999999999652 11 12245
Q ss_pred EEEEEecCccccccCC-CcceeEEeecChhhHHHHHHHHhhh-hhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHH
Q 015435 245 CLVAQSYAKNMGLYGE-RVGALSIVCKTEDVASRVESQLKLV-IRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMA 322 (407)
Q Consensus 245 ~i~~~s~sK~~~~~G~-r~G~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 322 (407)
.++.+|+-|+.| .|+ +.|.. ++..+++.++...++..- .......+..........++- ...+.
T Consensus 214 Dl~aGSLIKNpG-GgiAptGGY--IaGr~~lVe~~a~RLTaPGiG~e~G~t~~~~R~~~QGlFl-----------AP~vV 279 (403)
T PF06838_consen 214 DLMAGSLIKNPG-GGIAPTGGY--IAGRKDLVERAAYRLTAPGIGKEVGATLGTNRLMFQGLFL-----------APHVV 279 (403)
T ss_dssp SEEEEETTSGGG-TTT-SS-EE--EEESHHHHHHHHHHHS-TTTGGGSS--TTTHHHHHHHHHH-----------HHHHH
T ss_pred hheeccceeCCC-CCccCcCCE--EechHHHHHHHHhhhcCCccccccccCcchHHHHHhHHhh-----------chHHH
Confidence 689999999988 454 44443 366677666665555321 111111111111111111111 22444
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCccccc----CCceeEEecCC-CHHHHHHhH
Q 015435 323 DRIISMRQQLFDALSARGTPGDWSHII----KQIGMFTFTGL-NSEQVAFMT 369 (407)
Q Consensus 323 ~~~~~~~~~l~~~l~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~l 369 (407)
....+-.-+....++++| +++.+ +.+-+..-+.+ +.+.+...+
T Consensus 280 ~eAlKgaif~A~~fe~lG----~~v~P~~~~~R~DiIQai~l~~~e~l~~FC 327 (403)
T PF06838_consen 280 GEALKGAIFAAALFEKLG----FEVSPKPDDPRSDIIQAIELGSPEKLIAFC 327 (403)
T ss_dssp HHHHHHHHHHHHHHHHTT-----EEES-TTS--SSS-EEEE-SSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcC----CcCCCCCCCCCCceEEEEECCCHHHHHHHH
Confidence 555555566677777888 44443 34445555555 455544443
No 359
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.41 E-value=5.8e-11 Score=110.51 Aligned_cols=331 Identities=14% Similarity=0.112 Sum_probs=191.6
Q ss_pred CCCCeeeeeeeeeecCCCcc-ccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 29 TSPVKLNLGVGAYRTEEGKP-LVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
+....|||-+-. + . .|.+...+++.. . .-.|.......+|.+.+++++ +. +.+++ |+
T Consensus 39 s~dV~IDLrSDT-----g-T~apS~~m~aAM~~-G-----DD~Y~gdpSv~~Lee~vael~-G~-------E~alp--th 96 (467)
T TIGR02617 39 SEDVFIDLLTDS-----G-TGAVTQSMQAAMMR-G-----DEAYSGSRSYYALAESVKNIF-GY-------QYTIP--TH 96 (467)
T ss_pred CCCeEEECccCC-----C-CCCCCHHHHHHHHc-C-----CcccccCchHHHHHHHHHHHh-CC-------ceEEE--CC
Confidence 345667776432 2 3 255555555443 1 234777778889999999988 75 67888 99
Q ss_pred CcccHHHHHHHHHHhhc-CCCeEEecCC--------CCCChHHHHhhcCceeeEEEee--------cCCCCCcChhhHHH
Q 015435 108 SGTGSLRVGAEFLARHY-HQLTIYIPQP--------TWGNHPKVFTLAGLSVKTYRYY--------DPATRGLNFQGLLE 170 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~-~gd~Vi~~~p--------~y~~~~~~~~~~G~~~~~v~~~--------~~~~~~~d~~~l~~ 170 (407)
.|+++-.++..++ +. +||++++..+ .|..........|+.++.++.. .+..+.+|++++++
T Consensus 97 qGRgaE~Il~~~~--~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~ 174 (467)
T TIGR02617 97 QGRGAEQIYIPVL--IKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLER 174 (467)
T ss_pred CCchHHHHHHHhh--cccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHH
Confidence 9999998885443 66 6777764332 2333455677889888876431 22346789999999
Q ss_pred HHHcC--CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeecccccc----c------cCCCCCchhHHHHHH
Q 015435 171 DLRAA--PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQG----F------ASGSLDADAQSVRMF 238 (407)
Q Consensus 171 ~i~~~--~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~----~------~~~~~~~~~~~~~~~ 238 (407)
.+.+. .+...+...-..|.-.|+.+|.+.++++.++|++||+.++.|.+-.. | ++. ..++..+
T Consensus 175 ~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~-----~~si~eI 249 (467)
T TIGR02617 175 GIEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYK-----NWSIEQI 249 (467)
T ss_pred HHhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhc-----CCCHHHH
Confidence 99852 12222222112223358899999999999999999999999997421 1 121 1233333
Q ss_pred H-H-cCCcEEEEEecCccccccCCCcceeEEeecCh---hhHHHHHHHHhhhhhc-ccCCCChhHHHHHHHHhcChhhHH
Q 015435 239 V-A-DGGECLVAQSYAKNMGLYGERVGALSIVCKTE---DVASRVESQLKLVIRP-MYSSPPIHGASIVATILKDSTMYK 312 (407)
Q Consensus 239 ~-~-~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~ 312 (407)
. . ..-...+..|+||.++.| +|.+. +.+++ ++.+++....-..-.. .+.+.+.-.+.+++.-|...- .+
T Consensus 250 ~rE~~~~aDsvt~slsKglgAp---vGg~L-ag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~-~~ 324 (467)
T TIGR02617 250 TRETYKYADMLAMSAKKDAMVP---MGGLL-CFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGM-NL 324 (467)
T ss_pred HHHhhccCCEEEEEcCCCCCCc---ccceE-EecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcc-cH
Confidence 2 1 122335667899987644 66652 45555 2222222211111111 122334444444443343221 00
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecC-------C-----CHHH-HHHhHhhccEEEcCC
Q 015435 313 EWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTG-------L-----NSEQ-VAFMTKEYHIYMTSD 379 (407)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-------~-----~~~~-~~~~l~~~gi~~~~g 379 (407)
+++. .+ -+..++|.+.|.+.|. .+.. .||--++++ + .+.. +.++-.+.||...--
T Consensus 325 ---~yl~---~r-i~qv~yl~~~L~~~Gv----pi~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~ 392 (467)
T TIGR02617 325 ---DWLA---YR-INQVQYLVNGLEEIGV----VCQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEI 392 (467)
T ss_pred ---HHHH---HH-HHHHHHHHHHHHhCCC----cEEe-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEee
Confidence 1222 22 2356788999998884 4444 455445442 2 2222 334445567753221
Q ss_pred -----------C----------eEEecC--CCCCChhHHHHHHHHHHHh
Q 015435 380 -----------G----------RISMAG--LSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 380 -----------g----------Ris~~~--~~~e~i~~~~~~l~~~l~~ 405 (407)
| |+++.. .|.+.++..++++..+.++
T Consensus 393 G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 393 GSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred cceecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 1 888764 3668899999999988754
No 360
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.38 E-value=9.3e-11 Score=121.40 Aligned_cols=276 Identities=16% Similarity=0.153 Sum_probs=158.4
Q ss_pred CceEEeecCCcccHHHHHHHHHHhh--cCCC----eEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHH
Q 015435 99 NRVTTVQCLSGTGSLRVGAEFLARH--YHQL----TIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDL 172 (407)
Q Consensus 99 ~~i~~~~t~g~t~a~~~~~~~~~~~--~~gd----~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i 172 (407)
+++.+ +.+||+++....+...+.. .+|+ +|++++..|......+...|++++.++++ .++.+|+++|++++
T Consensus 558 d~~sl-~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d--~~G~iD~~~L~~~i 634 (954)
T PRK05367 558 DAVSL-QPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACD--ENGNIDLDDLRAKA 634 (954)
T ss_pred CCEEE-CccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCC--CCCCcCHHHHHHHH
Confidence 46666 2445556554432223322 3555 59999999988888899999999999983 34689999999999
Q ss_pred HcC-CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEec
Q 015435 173 RAA-PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSY 251 (407)
Q Consensus 173 ~~~-~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 251 (407)
... .+..++++ .+|++- |.+ .+++++|+++|+++|+++++|.++...... .. . .......++..|.
T Consensus 635 ~~~~~~la~V~i-t~pst~-G~~--e~~I~eI~~i~h~~G~~v~VDgA~~~al~~-l~----~----pg~~GADi~~~s~ 701 (954)
T PRK05367 635 EEHADNLAAIMI-TYPSTH-GVF--EETIREICEIVHEHGGQVYLDGANMNAQVG-LA----R----PGDIGADVSHLNL 701 (954)
T ss_pred hccCCCeEEEEE-EcCCCC-eee--cCCHHHHHHHHHHcCCEEEEECcChhhccC-CC----C----hhhcCCCEEEecC
Confidence 743 22344444 555543 332 346999999999999999999997422111 10 0 1112345778889
Q ss_pred Ccccc----ccCCCcceeEEeecChhhHHHHHHHHhhhh-----h---cccCCCChhHHH-H---HHHHhcChhhHHhHH
Q 015435 252 AKNMG----LYGERVGALSIVCKTEDVASRVESQLKLVI-----R---PMYSSPPIHGAS-I---VATILKDSTMYKEWT 315 (407)
Q Consensus 252 sK~~~----~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~~~~~-~---~~~~l~~~~~~~~~~ 315 (407)
+|.|+ ..|-.+|.+ .+. +.+...+.... . .........++. . +..++.... .
T Consensus 702 HK~f~~P~G~GGPg~G~l--~vr-----~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G-----~ 769 (954)
T PRK05367 702 HKTFCIPHGGGGPGVGPI--GVK-----AHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMG-----A 769 (954)
T ss_pred cccCCCCcCCCCCceEEE--eec-----ccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHC-----H
Confidence 99874 234446777 344 22332222211 0 011111222111 1 111111111 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC-----CceeEEec------CCCHHHHHHhHhhccEEEcC-----C
Q 015435 316 LELKAMADRIISMRQQLFDALSARGTPGDWSHIIK-----QIGMFTFT------GLNSEQVAFMTKEYHIYMTS-----D 379 (407)
Q Consensus 316 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-----~~~~~~~~------~~~~~~~~~~l~~~gi~~~~-----g 379 (407)
+.+.+..++...+.+|+.+.|.+. .+ ..+..+ ...++.+. +...+.+.+.|.++|+.... .
T Consensus 770 ~Glr~~a~~~~~~A~Yl~~~L~~~-~~--~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t~~~pv~ 846 (954)
T PRK05367 770 EGLRQATEVAILNANYIAKRLKDH-YP--VLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPTMSFPVA 846 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-cC--ccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHCCCeEeecCCccC
Confidence 345555555668888999988763 11 222111 12333343 23445566555778886633 2
Q ss_pred C--eEEecC-CCCCChhHHHHHHHHHHHh
Q 015435 380 G--RISMAG-LSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 380 g--Ris~~~-~~~e~i~~~~~~l~~~l~~ 405 (407)
| ||+... .+++|+++++++++++.++
T Consensus 847 ~~l~i~ptE~~s~~elDr~~~al~~i~~e 875 (954)
T PRK05367 847 GTLMVEPTESESKAELDRFCDAMIAIRAE 875 (954)
T ss_pred CEEEEEeeecCCHHHHHHHHHHHHHHHHH
Confidence 2 776654 3679999999999887654
No 361
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.35 E-value=6.5e-10 Score=113.43 Aligned_cols=295 Identities=16% Similarity=0.152 Sum_probs=170.0
Q ss_pred cccCCCC---CCc----HHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhh------cCCCeEEecCC
Q 015435 68 VKEYLPI---VGL----VDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARH------YHQLTIYIPQP 134 (407)
Q Consensus 68 ~~~y~~~---~g~----~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~------~~gd~Vi~~~p 134 (407)
.+.|.|. +|. .++.+.+++.. |. +++-+ +.+||+++-...+...+.. ...+.|+++..
T Consensus 516 ~hPyqPe~~sqG~lq~i~elq~~l~elt-Gm-------d~~Sl-~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~s 586 (939)
T TIGR00461 516 IHPFQPSNQVEGYQELIAQLEKWLCSIT-GF-------DAISL-QPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVS 586 (939)
T ss_pred cCCCCchHHhHHHHHHHHHHHHHHHHHH-CC-------CCccc-CCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcc
Confidence 5666664 344 44444555544 43 23332 3666666665432223321 12356889999
Q ss_pred CCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC-CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCce
Q 015435 135 TWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA-PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLL 213 (407)
Q Consensus 135 ~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~-~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~ 213 (407)
.+......+...|++++.+++ +.++.+|+++|++++++. .++.++++ .+|+| +|.+- +++++|+++|+++|.+
T Consensus 587 aHgtnPasa~~~G~~Vv~V~~--d~~G~iDle~L~~~i~~~~~~taaV~i-T~pst-~G~~e--~~I~eI~~iah~~G~~ 660 (939)
T TIGR00461 587 AHGTNPASAAMAGMQVVPVNC--DQDGNIDLVDLKNKAEQHGDELAAVMV-TYPST-HGVFE--PTIQHACDIVHSFGGQ 660 (939)
T ss_pred ccCcCHHHHHHCCCEEEEecc--CCCCCcCHHHHHHHHhhcCCceEEEEE-EeCCc-Cceec--ccHHHHHHHHHHcCCE
Confidence 998888889999999999998 345789999999999842 35566666 78888 78853 2499999999999999
Q ss_pred eeecccccc-ccCCCCCchhHHHHHHHHcCCcEEEEEecCcccc----ccCCCcceeEEeecChhhHHHHHHHHhhh---
Q 015435 214 PFFDSAYQG-FASGSLDADAQSVRMFVADGGECLVAQSYAKNMG----LYGERVGALSIVCKTEDVASRVESQLKLV--- 285 (407)
Q Consensus 214 li~D~~y~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~----~~G~r~G~~~~v~~~~~~~~~~~~~~~~~--- 285 (407)
+++|.++.. +..-. -+...+-.++.+|..|.|+ ..|-.+|.+ .++ +. +...+...
T Consensus 661 v~VDgAq~~al~~l~----------~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i--~vr-~~----L~~~lPg~~v~ 723 (939)
T TIGR00461 661 VYLDGANMNAQVGLT----------SPGDLGADVCHLNLHKTFCIPHGGGGPGMGPI--GVK-SH----LIPFLPKHDVV 723 (939)
T ss_pred EEEEecChhhCCCCC----------CccccCCCEEEecCCccCCCCCCCCCCCeEEE--EEh-hh----chhhcCCCccc
Confidence 999999743 22110 0122345688888999764 345556887 455 22 22222100
Q ss_pred ---------h--hcccC-CCCh-hHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC-C
Q 015435 286 ---------I--RPMYS-SPPI-HGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIK-Q 351 (407)
Q Consensus 286 ---------~--~~~~~-~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~ 351 (407)
+ +.... +... .....+-.++.-.. .+.+.+..+....+..|+.+.|.+ + ++..-+ .
T Consensus 724 ~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG-----~~GL~~~a~~ailnAnYl~~rL~~-~----~~~l~~~~ 793 (939)
T TIGR00461 724 SMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMG-----NEGLPKASVVAILNANYMATRLKD-H----YPILFVGT 793 (939)
T ss_pred ccccCCCCccccccccccccCcHHHHHHHHHHHHHHC-----HHHHHHHHHHHHHHHHHHHHHhhc-c----CcccccCC
Confidence 0 00000 0111 11111111122111 134666667777788999999976 3 222211 1
Q ss_pred cee----EE--ec------CCCHHHHHHhHhhccEEEcC-C----C----eEEecCCCCCChhHHHHHHHHHHHh
Q 015435 352 IGM----FT--FT------GLNSEQVAFMTKEYHIYMTS-D----G----RISMAGLSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 352 ~~~----~~--~~------~~~~~~~~~~l~~~gi~~~~-g----g----Ris~~~~~~e~i~~~~~~l~~~l~~ 405 (407)
.+. |+ +. +...+.+.+.|.++|+.... + | +.+-.. +++|++++++++.++-++
T Consensus 794 ~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~e-skeelD~f~~al~~I~~e 867 (939)
T TIGR00461 794 LKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESE-SLEELDRFCDAMIAIKEE 867 (939)
T ss_pred CCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeeccC-CHHHHHHHHHHHHHHHHH
Confidence 122 21 11 23455555555557885421 1 2 334443 678999999999877654
No 362
>PLN02452 phosphoserine transaminase
Probab=99.35 E-value=1.2e-10 Score=108.85 Aligned_cols=322 Identities=16% Similarity=0.141 Sum_probs=184.5
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhcccc-------ccccCCCC--CCcHHHHHHHHHHHhCCCCCCCCCCce
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQS-------RVKEYLPI--VGLVDFNKLSAKLILGADSPAIKDNRV 101 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~y~~~--~g~~~l~~~~a~~~~~~~~~~~~~~~i 101 (407)
..+++|+-|= . ..|+++.+++...+. +.. ...++++. .-+.+.++.+.+++ +... ..++
T Consensus 6 ~~~~~f~pGP----~--~lp~~Vl~~~~~~~~-~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~-~~p~----~y~v 73 (365)
T PLN02452 6 GRVFNFSAGP----A--TLPANVLAKAQAELY-NWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELL-DIPD----NYEV 73 (365)
T ss_pred CceEeeeCCC----C--CCCHHHHHHHHHHHh-cccccCccccccCCCchHHHHHHHHHHHHHHHHh-CCCC----CceE
Confidence 4567787551 1 346677777766653 100 12223332 22556666677766 4210 1244
Q ss_pred EEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCC--hHHHHhhcCceeeEEEee-cCCCCCcChhhHHHHHHcCCCC
Q 015435 102 TTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGN--HPKVFTLAGLSVKTYRYY-DPATRGLNFQGLLEDLRAAPSG 178 (407)
Q Consensus 102 ~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~--~~~~~~~~G~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~ 178 (407)
+++ ..|||.+++++ .+..+.+|+++++...+..+ +.+.++.+|...+..... ......++++++ ...++.
T Consensus 74 ~~l-~Gsgt~~~ea~--~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 146 (365)
T PLN02452 74 LFL-QGGASTQFAAI--PLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEW----ELTPDA 146 (365)
T ss_pred EEE-eCccHHHHHHH--HHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHc----CCCCCC
Confidence 442 78889999999 46667799998888765543 344666777643333211 111124566654 222445
Q ss_pred cEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCcccccc
Q 015435 179 AIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLY 258 (407)
Q Consensus 179 ~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 258 (407)
..+.+ ++..+.||+.++ ++.++. ++++|+|.+.+ +...+. .+..+ .+ ...|..|.+|.+
T Consensus 147 ~~v~~-~hnETstGv~~~--~~~~i~------~~~lvVDa~Ss-~g~~pi-----dv~~~-----~v-~~~saqK~lGP~ 205 (365)
T PLN02452 147 KFVHI-CANETIHGVEFK--DYPDVG------NVPLVADMSSN-FLSKPV-----DVSKY-----GV-IYAGAQKNVGPS 205 (365)
T ss_pred cEEEE-CCCCCCCcEecC--cccccC------CCeEEEECCcc-ccCccc-----CHHHc-----CE-EEEecccccCCC
Confidence 66666 666778899644 455553 38999999744 333222 12111 13 336999999988
Q ss_pred CCCcceeEEeecChhhHHHHHHHHhhh--------hhcccCCCChhHHHHHHHHhcChhhHHhHHH-HHHHHHHHHHHHH
Q 015435 259 GERVGALSIVCKTEDVASRVESQLKLV--------IRPMYSSPPIHGASIVATILKDSTMYKEWTL-ELKAMADRIISMR 329 (407)
Q Consensus 259 G~r~G~~~~v~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~ 329 (407)
| +|.+ +++ +++.++.......+ ...++.+|+..+..++..+++-.. .. .++.+.++.++++
T Consensus 206 G--l~~v--~vr-~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~-----~~gGl~~~~~r~~~~a 275 (365)
T PLN02452 206 G--VTIV--IIR-KDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLL-----AQGGLKAMEKRNIRKA 275 (365)
T ss_pred C--eEEE--EEc-HHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHH-----HccCHHHHHHHHHHHH
Confidence 7 4666 344 33333221110101 011224667777777776665321 12 4788899999999
Q ss_pred HHHHHHHHhc-CCCCCccc-ccC--Cce-eEEec--CCC-HHHHHHhHhhccEEEcCC-----C-eEEecC-CCCCChhH
Q 015435 330 QQLFDALSAR-GTPGDWSH-IIK--QIG-MFTFT--GLN-SEQVAFMTKEYHIYMTSD-----G-RISMAG-LSSKTVPH 394 (407)
Q Consensus 330 ~~l~~~l~~~-~~~~~~~~-~~~--~~~-~~~~~--~~~-~~~~~~~l~~~gi~~~~g-----g-Ris~~~-~~~e~i~~ 394 (407)
+++++.|++. |. +.. ..+ +.. .+.|. +.. .+...+.++++|+...+| | |+|... ++.++++.
T Consensus 276 ~~l~~~l~~~~G~---y~~~~~~~~rs~~~vsF~~~~~~~~~~f~~~~~~~g~~~~~G~r~~gg~R~s~yna~~~~~v~~ 352 (365)
T PLN02452 276 DLLYDAIDESNGF---YVCPVEKSVRSLMNVPFTLGGSELEAEFVKEAAKAGMVQLKGHRSVGGMRASIYNAMPLAGVEK 352 (365)
T ss_pred HHHHHHHHhCCCc---ccCCCChHHhCCeEEEEEcCCchhHHHHHHHHHHCCCcccCCccccCceEEECcCCCCHHHHHH
Confidence 9999999885 42 111 111 122 22222 322 223456667799999987 2 998654 78899999
Q ss_pred HHHHHHHHHHh
Q 015435 395 LTDAIHAAVTR 405 (407)
Q Consensus 395 ~~~~l~~~l~~ 405 (407)
+++.++++-++
T Consensus 353 L~~~m~~f~~~ 363 (365)
T PLN02452 353 LVAFMKDFQAK 363 (365)
T ss_pred HHHHHHHHHHh
Confidence 99999987654
No 363
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.33 E-value=1.7e-11 Score=111.62 Aligned_cols=287 Identities=13% Similarity=0.150 Sum_probs=171.6
Q ss_pred CcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEe
Q 015435 76 GLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRY 155 (407)
Q Consensus 76 g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~ 155 (407)
-+.++.+.+|+++ +. ++.+++ ..| -..+... +-+.+.+|.-|+-.+..+......++..|+.++.+..
T Consensus 183 ~hkelE~l~A~f~-g~------e~a~vF--~mG-f~TNs~~--~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkH 250 (519)
T KOG1357|consen 183 EHKELEELVARFL-GV------EDAIVF--SMG-FATNSMN--IPSLLGKGSLIISDELNHASLITGARLSGATTRVFRH 250 (519)
T ss_pred HHHHHHHHHHHhc-CC------cceEEE--ecc-ccccccC--cceeecCCcceeeccccchheeccccccCceEEEEec
Confidence 3677788888877 54 256666 333 2222222 2344778888888889999999999999999999977
Q ss_pred ecCCCCCcChhhHHHHHHc----C-C-----CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccC
Q 015435 156 YDPATRGLNFQGLLEDLRA----A-P-----SGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFAS 225 (407)
Q Consensus 156 ~~~~~~~~d~~~l~~~i~~----~-~-----~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~ 225 (407)
+ |.++|++.+.+ . | -++++++.-.-..--|. .-++.+++.++++|..+|+.||+++....
T Consensus 251 N-------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~---iv~Lp~vvalkkkykayl~lDEAHSiGA~ 320 (519)
T KOG1357|consen 251 N-------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGT---IVDLPEVVALKKKYKAYLYLDEAHSIGAM 320 (519)
T ss_pred C-------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCe---ecccHHHHHhhccccEEEEeecccccccc
Confidence 4 33444444432 1 2 22344442222223455 34688999999999999999999875443
Q ss_pred CCCCchhHHHHHH--HHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHH
Q 015435 226 GSLDADAQSVRMF--VADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVAT 303 (407)
Q Consensus 226 ~~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (407)
+. -...+..+ .+..+..|.+++|+|.++..| |++ +.++++.+.++...... -...+.+++.+|+....
T Consensus 321 g~---tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gyi---agsk~lid~lrt~s~~~-~yat~~sppvaqq~~ss 390 (519)
T KOG1357|consen 321 GA---TGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYI---AGSKELIDYLRTPSPSA-LYATSLSPPVAQQILTS 390 (519)
T ss_pred CC---CCcceeeccCCCchhheeecceehhhccccc---cee---cCcHHHHhhhccCCCce-eecccCChHHHHHHHHH
Confidence 21 11122222 123467799999999999877 777 55554443333211111 11222444555543332
Q ss_pred H--hcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCce----eEEec-CCCHHHHHHhHhhccEEE
Q 015435 304 I--LKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIG----MFTFT-GLNSEQVAFMTKEYHIYM 376 (407)
Q Consensus 304 ~--l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~l~~~gi~~ 376 (407)
+ +...+ ..+..++..+++++++.+++..++..| +-+.....+ +..+. ..-..+-+++|+ ++|.+
T Consensus 391 l~~i~G~d----gt~~g~~k~~~l~~ns~yfr~~l~~~g----fivyG~~dSpVvplll~~~~k~~~f~r~~l~-~nigv 461 (519)
T KOG1357|consen 391 VKHIMGED----GTNRGRQKIERLAENSRYFRWELQKMG----FIVYGNNDSPVVPLLLYGPAKIVAFSREMLE-RNIGV 461 (519)
T ss_pred HHhhcCCC----cccHHHHHHHHHHhhhHHHHHhhhcCc----EEEecCCCCCcceeeecCcccccHHHHHHHh-cCceE
Confidence 2 22211 124466777889999999999999887 444433332 11111 223445556666 56655
Q ss_pred cCCC-----------eEEecC-CCCCChhHHHHHHHHHH
Q 015435 377 TSDG-----------RISMAG-LSSKTVPHLTDAIHAAV 403 (407)
Q Consensus 377 ~~gg-----------Ris~~~-~~~e~i~~~~~~l~~~l 403 (407)
.-.| |++.+. ++.|+++++++.+.++-
T Consensus 462 VvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g 500 (519)
T KOG1357|consen 462 VVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVG 500 (519)
T ss_pred EEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhc
Confidence 4433 777654 57799999998887654
No 364
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.33 E-value=2.7e-10 Score=107.24 Aligned_cols=285 Identities=12% Similarity=0.057 Sum_probs=166.1
Q ss_pred cccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCC-----CCCceEEeecCCcccHHHHHHHHHHh
Q 015435 48 PLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAI-----KDNRVTTVQCLSGTGSLRVGAEFLAR 122 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~-----~~~~i~~~~t~g~t~a~~~~~~~~~~ 122 (407)
+.+..++...+.... +. ....|...+...++.+.+.+++....+.+- +...-++ |+|||+++..++...+.
T Consensus 50 ~~~~~i~~~~l~~~~-n~-n~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~--t~Ggt~anl~al~aAR~ 125 (373)
T PF00282_consen 50 PSPASILADLLASAL-NQ-NGFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVF--TSGGTEANLYALLAARE 125 (373)
T ss_dssp -CHHHHHHHHHHHHH-T--BTTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEE--ESSHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhhh-cc-cccccccccccccchHHHHHHHHHHhCCcccccccCCCceeE--eccchHHHHHHHHHHHH
Confidence 445566666666655 22 234454444566677777777744333321 1234667 99999999887533322
Q ss_pred h------cCC-----C-eEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC---CCCcEEEEecCC
Q 015435 123 H------YHQ-----L-TIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA---PSGAIVLLHACA 187 (407)
Q Consensus 123 ~------~~g-----d-~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~v~i~~~p 187 (407)
. ..| + .|++++-+|.+..+++..+|+.++.+|++ + ++.+|+++|++++.+. ..++++++.+.+
T Consensus 126 ~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~-~-~~~md~~~L~~~l~~~~~~g~~p~~vvat~G 203 (373)
T PF00282_consen 126 RALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTD-E-DGRMDIEALEKALEKDIANGKTPFAVVATAG 203 (373)
T ss_dssp HHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BB-T-TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS
T ss_pred HHhhhhhhcccccccccccccccccccHHHHhcceeeeEEEEecCC-c-chhhhHHHhhhhhcccccccccceeeeccCC
Confidence 1 012 2 46677778999999999999999999994 3 5789999999988643 234555555667
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHH-cCCcEEEEEecCccccccCCCcceeE
Q 015435 188 HNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVA-DGGECLVAQSYAKNMGLYGERVGALS 266 (407)
Q Consensus 188 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~ 266 (407)
...||. .+++++|+++|+++++++.+|.+|.+...-..+... +.. -..-.=+..+++|.++.| ..+|++
T Consensus 204 tt~~Ga---~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~-----~~~gi~~adSit~d~HK~l~~P-~~~~~~- 273 (373)
T PF00282_consen 204 TTNTGA---IDPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRH-----LLFGIERADSITIDPHKWLGVP-YGCGVL- 273 (373)
T ss_dssp -TTTSB---B-SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGG-----GGTTGGGESEEEEETTTTTS-S-SS-EEE-
T ss_pred Cccccc---ccCHHHHhhhccccceeeeecccccccccccccccc-----cccccccccccccchhhhhcCC-ccceeE-
Confidence 777888 689999999999999999999999883321111111 111 112234455789998854 678888
Q ss_pred EeecChhhHHHHH----HHHhhhh---------hcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHH
Q 015435 267 IVCKTEDVASRVE----SQLKLVI---------RPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLF 333 (407)
Q Consensus 267 ~v~~~~~~~~~~~----~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 333 (407)
+++++....... ..+.... ...+...+. ...++..++.- +..=.+.+.+..++..++.+++.
T Consensus 274 -l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR-~~~alk~w~~l---~~~G~~G~~~~i~~~~~~a~~l~ 348 (373)
T PF00282_consen 274 -LVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSR-RFRALKLWATL---KSLGREGYRERIRRCIELARYLA 348 (373)
T ss_dssp -EESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSG-HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -EeecccchHHHhccChhhhcccccccccccccccccccccc-cchHHHHHHHH---HhcCHHHHHHHHHHHHHHHHHHH
Confidence 688876433211 1111000 001112233 23333322210 00112456777788888999999
Q ss_pred HHHHhcCCCCCcccc-cCCceeEE
Q 015435 334 DALSARGTPGDWSHI-IKQIGMFT 356 (407)
Q Consensus 334 ~~l~~~~~~~~~~~~-~~~~~~~~ 356 (407)
+.+++.+. ++.. .+..+...
T Consensus 349 ~~l~~~~~---~el~~~~~~~~vc 369 (373)
T PF00282_consen 349 DRLRKDPR---FELVNEPDLNIVC 369 (373)
T ss_dssp HHHHTSTT---EEESSTTSSSEEE
T ss_pred HHHHhCCC---EEEEcCCCceEEE
Confidence 99998874 6654 34444444
No 365
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.31 E-value=1.4e-09 Score=110.50 Aligned_cols=302 Identities=14% Similarity=0.114 Sum_probs=167.7
Q ss_pred cccCCC---CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhc-----C-CCeEEecCCCCCC
Q 015435 68 VKEYLP---IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY-----H-QLTIYIPQPTWGN 138 (407)
Q Consensus 68 ~~~y~~---~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~-----~-gd~Vi~~~p~y~~ 138 (407)
.+.|.| .+|..++...+.+++....+. +.+.+ +-.+|+++..+.+...+... + .++|+++.-.|..
T Consensus 529 ~hPyqp~e~sQG~lq~i~elq~~l~eLtGm----d~~Sl-~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgt 603 (954)
T PRK12566 529 LHPFAPREQAEGYRAMIDELEAWLCAITGF----DAICM-QPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGT 603 (954)
T ss_pred CCCCCchhhhcCHHHHHHHHHHHHHHHHCC----CeEee-cCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEeccccccc
Confidence 367877 677555544444444222121 33444 34466666645432333321 2 3568888888866
Q ss_pred hHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC-CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeec
Q 015435 139 HPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA-PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFD 217 (407)
Q Consensus 139 ~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~-~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D 217 (407)
....+...|++++.++.+ .++.+|+++|++++++. ++..++++ .+|++-+ ++ .+++++|+++|+++|+++++|
T Consensus 604 Npasa~~~GieVv~Vp~D--~~G~iDle~L~a~I~~~~~~laaVmi-T~Pnt~G--v~-e~~V~eI~~iah~~Galv~vD 677 (954)
T PRK12566 604 NPASAQMAGMRVVIVECD--PDGNVDLDDLKAKAAAAGDRLSCLMI-TYPSTHG--VY-EEGIREICEVVHQHGGQVYMD 677 (954)
T ss_pred CHHHHHHCCCEEEEeccC--CCCCcCHHHHHHHhhccCCCEEEEEE-EecCcCc--ee-cchHHHHHHHHHHcCCEEEEE
Confidence 667788899999999983 35689999999999733 33444455 4444333 33 568999999999999999999
Q ss_pred cccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccc----cCCCcceeEEeecChhhHHHHHHHHhhhh-------
Q 015435 218 SAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGL----YGERVGALSIVCKTEDVASRVESQLKLVI------- 286 (407)
Q Consensus 218 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~v~~~~~~~~~~~~~~~~~~------- 286 (407)
.+... ...... . +...+..++.++..|.|+. .|.-+|.+ .+. +.+...+...-
T Consensus 678 gA~~~-a~~~l~----~----Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~i--av~-----~~L~pfLp~~P~~d~~G~ 741 (954)
T PRK12566 678 GANLN-AQVGLA----R----PADIGADVSHMNLHKTFCIPHGGGGPGMGPI--GVR-----AHLAPFVANHPVVPVEGP 741 (954)
T ss_pred eeChh-hccCCC----C----hhhcCCCEEEecCCcccCcCccCCCCccchh--hhh-----hhhhhhccCCCCcCCCCC
Confidence 99641 111110 0 1223457888999998852 23334554 122 32333222110
Q ss_pred --hcccC-CCChhH---HHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeE-----
Q 015435 287 --RPMYS-SPPIHG---ASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMF----- 355 (407)
Q Consensus 287 --~~~~~-~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~----- 355 (407)
+.... +..... ..++..++.... ..+.+.......+..|+.+.|.+ +.+ ..+..+.+.+|
T Consensus 742 ~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG------~eLk~aa~~ailnAnYla~rL~~-~~~--v~~~~~~~~~~hEfii 812 (954)
T PRK12566 742 DPNNGAVSAAPWGSASILPISWMYIAMMG------PQLADASEVAILSANYLANQLGG-AFP--VLYRGRNERVAHECIL 812 (954)
T ss_pred CCCCCceeecccchHHHHHHHHHHHHHHC------HHHHHHHHHHHHHHHHHHHHhHh-hCC--CCcCCCCCCeeeEEEE
Confidence 00111 111111 222333333221 12444445556788899998876 322 22222212111
Q ss_pred EecC------CCHHHHHHhHhhccEEEc----CC--C-eEEecC-CCCCChhHHHHHHHHHHHh
Q 015435 356 TFTG------LNSEQVAFMTKEYHIYMT----SD--G-RISMAG-LSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 356 ~~~~------~~~~~~~~~l~~~gi~~~----~g--g-Ris~~~-~~~e~i~~~~~~l~~~l~~ 405 (407)
.+.. .+.+.+.+.|.++||... |. . ||+... .+++|+++++++++++.++
T Consensus 813 ~~~~l~~~~g~~~~dvakRL~d~Gihapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e 876 (954)
T PRK12566 813 DLRPLKAQTGISEEDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAE 876 (954)
T ss_pred EccccccccCCCHHHHHHHHHHCCcEEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 1111 344445444446787542 22 2 887664 3679999999999988765
No 366
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.30 E-value=9.1e-10 Score=105.20 Aligned_cols=291 Identities=18% Similarity=0.176 Sum_probs=171.9
Q ss_pred CcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEe
Q 015435 76 GLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRY 155 (407)
Q Consensus 76 g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~ 155 (407)
-+.+..+.+|+.+ +.. .-.++ ++|+|.++.++ +.+.+.+||.|+++.+++.+....+..+|+.++++.-
T Consensus 71 ~i~eAqe~aA~~f-gAd------~tyFv--vNGTS~ank~v--i~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p 139 (557)
T COG1982 71 PIKEAQELAARVF-GAD------HTYFV--VNGTSTANKAV--INAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEP 139 (557)
T ss_pred cHHHHHHHHHHHh-CCC------ceEEE--ECCccHHHHHH--HHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecC
Confidence 3555566666655 652 34556 99999999999 5777999999999999999999999999999999765
Q ss_pred e-cC-C--CCCcChhhHHHHHHcCCCC-cEEEEecCCCCCC--CCCCCHHHHHHHHHHHHHcCceeeecccccccc-CCC
Q 015435 156 Y-DP-A--TRGLNFQGLLEDLRAAPSG-AIVLLHACAHNPT--GVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFA-SGS 227 (407)
Q Consensus 156 ~-~~-~--~~~~d~~~l~~~i~~~~~~-~~v~i~~~p~NPt--G~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~-~~~ 227 (407)
. ++ - -.+++.+.+.+.+.+.+.. +++++ .||| |++++ +++|.+.++++++++.+|+++.... ..+
T Consensus 140 ~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vi----tnpTYdGv~~n---~~~i~~~~~~~~a~v~~deah~~~~~~~~ 212 (557)
T COG1982 140 SRNPLYGIIGGIPLETFKEALLAHPDAEKLAVI----TNPTYDGVCYN---LRKIVELLHHYGAWVLYDEAHPAHFDFSP 212 (557)
T ss_pred CCCccccccCCCCHHHHHHHHHhChhhheeEEE----ecCccceEeec---HHHHHHHHhhcCceEEhhhcCcccccccc
Confidence 3 22 1 1477999999988766655 66666 4777 99886 6777777999999999999864222 211
Q ss_pred CCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecC--hhhHHHHHHHHhhhhhcccCCCChhHHHHHHHH-
Q 015435 228 LDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKT--EDVASRVESQLKLVIRPMYSSPPIHGASIVATI- 304 (407)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 304 (407)
..+. .......+++.-|..|.++ ++.-+..+ ...+ .-..+++-..+...+ +++|.....+.+.+
T Consensus 213 ----~l~~--~~~~~~~~~~tqS~HK~l~--alSQaS~i-Hv~~~~~~~~~r~nea~~~h~----STSPsY~l~ASlD~A 279 (557)
T COG1982 213 ----MLPE--SALNGGADFVTQSTHKLLA--ALSQASMI-HVKDGRAVNHERFNEALMMHQ----STSPSYPLMASLDVA 279 (557)
T ss_pred ----cCcc--hhhhcCceEEEechhhhhh--hhhhhHHH-hhCCCccCCHHHHHHHHHHHc----cCCchHHHHHHHHHH
Confidence 1111 1223567889999999875 44443331 3443 111234444443332 23333333333222
Q ss_pred --hcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCC-----ce----------eEE-----------
Q 015435 305 --LKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQ-----IG----------MFT----------- 356 (407)
Q Consensus 305 --l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-----~~----------~~~----------- 356 (407)
+....-+..|++.+ +..-+.++.+++..+..+. +....+. .+ .+.
T Consensus 280 r~~~~~~G~~l~~~~~----~~~i~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp 352 (557)
T COG1982 280 RMQEGNAGRELWQEVI----DEAIDFRKALRRLINEIGF---FPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTP 352 (557)
T ss_pred HHhhhhhhHHHHHHHH----HHHHHHHHHHHHHHHhcCC---eeeccccccCCcccccccccccccceeccccEEEEecC
Confidence 11222222332222 2333344444444444431 2221111 01 111
Q ss_pred ecCCCHHHHHHhHhhccEEEcCCC--eEEecC-CCCCChhHHHHHHHHHHH
Q 015435 357 FTGLNSEQVAFMTKEYHIYMTSDG--RISMAG-LSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 357 ~~~~~~~~~~~~l~~~gi~~~~gg--Ris~~~-~~~e~i~~~~~~l~~~l~ 404 (407)
-.|+++-.+...|+++||.....+ ++.+.- ....+....++.|.++++
T Consensus 353 ~~Gipg~~v~~~L~e~gii~e~~~d~~~lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 353 EFGIPGAIVAKYLREHGIIPEETGDYSNLLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred CCCCcHHHHHHHHHHcCCeeeecCCceeeEEeeeccchHHHHHHHHHHHHH
Confidence 115567778888888898887776 433221 122556666666666655
No 367
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.26 E-value=9.4e-10 Score=113.63 Aligned_cols=277 Identities=14% Similarity=0.101 Sum_probs=163.1
Q ss_pred cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCC--CeEEecCCCCCChHHHHh----hcCcee
Q 015435 77 LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQ--LTIYIPQPTWGNHPKVFT----LAGLSV 150 (407)
Q Consensus 77 ~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~g--d~Vi~~~p~y~~~~~~~~----~~G~~~ 150 (407)
+.++++.++++. +. +.+|+.+ +.++|.+.+++.. ...+.+| |+|++++..|+.+...++ ..|+++
T Consensus 150 l~~~Qt~ia~Lt-G~-----~~anaSL--~d~aTAaaea~~~-a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV 220 (993)
T PLN02414 150 LLNYQTMITDLT-GL-----PMSNASL--LDEGTAAAEAMAM-CNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEV 220 (993)
T ss_pred HHHHHHHHHHHh-CC-----ChhhEee--cCChHHHHHHHHH-HHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEE
Confidence 667788888887 53 3589999 9999999998852 2234444 789999999999877665 469999
Q ss_pred eEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCc
Q 015435 151 KTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDA 230 (407)
Q Consensus 151 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~ 230 (407)
+.++..+ .+ ... .....+++ .. -|-+|.+. ++++|+++|+++|+++++ .+. .+......
T Consensus 221 ~~v~~~~-----~~------~~~--~~v~~vlv-q~-P~~~G~v~---dv~~I~~~ah~~GaL~iV-aad-~lal~~l~- 279 (993)
T PLN02414 221 VVADEKD-----FD------YSS--GDVCGVLV-QY-PATDGEVL---DYAEFVKNAHANGVKVVM-ATD-LLALTMLK- 279 (993)
T ss_pred EEecchh-----hc------ccc--CceEEEEE-ec-CCCCeEEc---CHHHHHHHHHHcCCEEEE-EEC-HHHhcCCC-
Confidence 9887721 11 001 12333333 22 23489964 688999999999999999 332 12222110
Q ss_pred hhHHHHHHHHcCCcEEEEEecCccc---cccCCCcceeEEeecChhhHHHHHHHHhh-hh--------------------
Q 015435 231 DAQSVRMFVADGGECLVAQSYAKNM---GLYGERVGALSIVCKTEDVASRVESQLKL-VI-------------------- 286 (407)
Q Consensus 231 ~~~~~~~~~~~~~~~i~~~s~sK~~---~~~G~r~G~~~~v~~~~~~~~~~~~~~~~-~~-------------------- 286 (407)
++ ......+++++..|.. |..|-+.|++ .+. ++ +...+.. ..
T Consensus 280 ---~p----ge~GADi~vgsgqKwg~P~G~GGP~aGfl--avr-~~----~~r~~PgriVG~s~d~~g~~~~~l~LqtRe 345 (993)
T PLN02414 280 ---PP----GEWGADIVVGSAQRFGVPMGYGGPHAAFL--ATS-QE----YKRLMPGRIIGVSVDSSGKPALRMAMQTRE 345 (993)
T ss_pred ---CH----hhccCcEEEECCCccccCCCCCCCCeeEE--EEC-HH----HHhhCCCcccCcccCCCCCccccccccccc
Confidence 11 2223456778877765 2245567888 455 22 2222210 00
Q ss_pred ---hcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc-CCceeEEecCCCH
Q 015435 287 ---RPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHII-KQIGMFTFTGLNS 362 (407)
Q Consensus 287 ---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~ 362 (407)
+....+++..+..++.+.+...-+...-...+++.++++.++..++.+.|...| +++.. +..+.+.+.--+.
T Consensus 346 qhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G----~~~~~~~~f~~vt~~~~~~ 421 (993)
T PLN02414 346 QHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLG----FQVQSLPFFDTVKVKCSDA 421 (993)
T ss_pred chhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcC----CccCCCCCcCeEEEecCCH
Confidence 001113333223333322221100000013467778889999999999998877 33322 2233343321144
Q ss_pred HHHHHhHhhccEEEcCC--C--eEEecC-CCCCChhHHHHHHHH
Q 015435 363 EQVAFMTKEYHIYMTSD--G--RISMAG-LSSKTVPHLTDAIHA 401 (407)
Q Consensus 363 ~~~~~~l~~~gi~~~~g--g--Ris~~~-~~~e~i~~~~~~l~~ 401 (407)
+.+.+.|.++||.+... + |+|+.. .+++||+++++.|..
T Consensus 422 ~~v~~~L~~~gI~l~~~~~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 422 DAIADAAAKVGINLRVVDANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred HHHHHHHHHCCCeeEEecCCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 55666667789977643 2 888765 467999999999863
No 368
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.23 E-value=1.2e-09 Score=101.27 Aligned_cols=320 Identities=15% Similarity=0.094 Sum_probs=179.8
Q ss_pred eeeeeeeeeecCCCccccchhHHHHHHHHhccccc-------cccCCCCC--CcHHHHHHHHHHHhCCCCCCCCCCceEE
Q 015435 33 KLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSR-------VKEYLPIV--GLVDFNKLSAKLILGADSPAIKDNRVTT 103 (407)
Q Consensus 33 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~y~~~~--g~~~l~~~~a~~~~~~~~~~~~~~~i~~ 103 (407)
-++|+.|= . ..|+++.+++.+++. +-.. ..++++.. -+.+..+.+.+++ +.. +..+|++
T Consensus 5 ~~nF~aGP-----a-~lp~~Vl~~~~~~~~-~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll-~~P----~~y~Vlf 72 (364)
T PRK12462 5 QLNFSGGP-----G-ALPDTVLEQVRQAVV-ELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLL-GIP----DEYGVVF 72 (364)
T ss_pred cceecCCC-----c-CCCHHHHHHHHHHHh-cccccCccccccccccHHHHHHHHHHHHHHHHHh-CCC----CCCeEEE
Confidence 45777552 1 458888888888876 2111 22333311 2445555566655 431 1135655
Q ss_pred eecCCcccHHHHHHHHHHhhcCCCeEE-ecCCCCCC--hHHHHhhcCceeeEEEeec--CCCCCcChhhHHHHHHcCCCC
Q 015435 104 VQCLSGTGSLRVGAEFLARHYHQLTIY-IPQPTWGN--HPKVFTLAGLSVKTYRYYD--PATRGLNFQGLLEDLRAAPSG 178 (407)
Q Consensus 104 ~~t~g~t~a~~~~~~~~~~~~~gd~Vi-~~~p~y~~--~~~~~~~~G~~~~~v~~~~--~~~~~~d~~~l~~~i~~~~~~ 178 (407)
+ ..|||++++++ .+..+.+||+++ +...++.+ +.+.++.+| ++..+.... +.+..++++++ ...++.
T Consensus 73 l-~GggT~~~ea~--~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~----~~~~d~ 144 (364)
T PRK12462 73 L-QGGSSLQFSMI--PMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL----DWDARA 144 (364)
T ss_pred E-eccHHHHHHHH--HHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh----ccCCCC
Confidence 2 66689999998 466678999665 45444432 244555666 554443211 11233445544 212344
Q ss_pred cEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCcccccc
Q 015435 179 AIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLY 258 (407)
Q Consensus 179 ~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 258 (407)
..+.+ ++..+.||+.++ ++.+.++.++|+|.+-. +...+. .+.. ..++..|.-|.+|.+
T Consensus 145 ~~v~~-t~NETstGv~~~--------~~~~~~~~llvvD~sS~-~~s~pi-----d~~~------~dvi~agsQKnlgP~ 203 (364)
T PRK12462 145 PFRHY-VSNETVEGLQFP--------DAAGLPDSPLIADMSSD-FMSRPF-----DVEA------YGMVYAHAQKNLGPA 203 (364)
T ss_pred cEEEE-ccCCCCceEecC--------cccccCCCeEEEEcCch-hhCCCC-----ChHH------ccEEEeeccccCCCC
Confidence 55555 555667798775 23344689999999743 433322 2222 256667779999977
Q ss_pred CCCcceeEEeecChhhHHHHHHHHhhh-------h-hcccCCCChhHHHHHHHHhcChhhHHhHHH--HHHHHHHHHHHH
Q 015435 259 GERVGALSIVCKTEDVASRVESQLKLV-------I-RPMYSSPPIHGASIVATILKDSTMYKEWTL--ELKAMADRIISM 328 (407)
Q Consensus 259 G~r~G~~~~v~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~ 328 (407)
|+ +.+ +. +++..++.......+ . ...+.+|+....+++..+++-.. ++ .++.+.++.+++
T Consensus 204 Gl--tvv--iv-s~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~-----~e~GGl~~~~~r~~~k 273 (364)
T PRK12462 204 GV--TVA--II-RRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIR-----DEIGGVHAMRDINARK 273 (364)
T ss_pred ce--EEE--EE-CHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHH-----HhccCHHHHHHHHHHH
Confidence 74 433 33 344333322111111 1 12333667777777776655221 13 578888999999
Q ss_pred HHHHHHHHHhcCCCCCccc-cc--CCceeEEecCC-CHH---HHHHhHhhccEEEcCC-----C-eEEecC-CCCCChhH
Q 015435 329 RQQLFDALSARGTPGDWSH-II--KQIGMFTFTGL-NSE---QVAFMTKEYHIYMTSD-----G-RISMAG-LSSKTVPH 394 (407)
Q Consensus 329 ~~~l~~~l~~~~~~~~~~~-~~--~~~~~~~~~~~-~~~---~~~~~l~~~gi~~~~g-----g-Ris~~~-~~~e~i~~ 394 (407)
++++++.+.+...- +.. .. .++-+-+...+ +.+ ...+.++++|+....| | |+|+.. ++.|+++.
T Consensus 274 a~~ly~~id~~~~~--~~~~~~~~~RS~mnv~f~~~~~~l~~~f~~~a~~~gl~~lkGhr~vgg~Ras~yna~~~e~v~~ 351 (364)
T PRK12462 274 AAMLYATLDALNEV--IDCHAHRAARSTMNVAFRFRQPRLDTLFKEQSTEAGFCGLSGHRSIGGIRASLYNAVSEQAVSR 351 (364)
T ss_pred HHHHHHHHHhCCCc--ccCCCChhhcCcceEEEEcCCHHHHHHHHHHHHHCCCccccCCcccCceEEEcCCCCCHHHHHH
Confidence 99999999987521 111 11 12222222222 221 2334446689988776 3 999765 68899999
Q ss_pred HHHHHHHHHHh
Q 015435 395 LTDAIHAAVTR 405 (407)
Q Consensus 395 ~~~~l~~~l~~ 405 (407)
+++-++++-++
T Consensus 352 L~~fm~~f~~~ 362 (364)
T PRK12462 352 LCAFLKDFAIR 362 (364)
T ss_pred HHHHHHHHHHh
Confidence 99998887654
No 369
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.22 E-value=5.7e-10 Score=96.59 Aligned_cols=341 Identities=13% Similarity=0.113 Sum_probs=198.3
Q ss_pred hcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeec
Q 015435 27 KDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQC 106 (407)
Q Consensus 27 ~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t 106 (407)
..+++.++|+-...- .-| ...++++++...++.. -....++ -..++.+....+...... -+-++| +
T Consensus 43 DE~g~~yLDCInNVa--Hvg-hchp~VV~A~~kQmat-~~tN~RF----lhd~lv~cA~~l~stlPe----Lsvc~F--~ 108 (452)
T KOG1403|consen 43 DEEGTRYLDCINNVA--HVG-HCHPEVVRAGAKQMAT-ISTNNRF----LHDELVQCARTLTSTLPE----LSVCFF--V 108 (452)
T ss_pred ccCcccHHHHhhhhh--hcc-cCCHHHHHHHHHHHhH-hcccchh----hHHHHHHHHHHHhhcCCC----ceEEEE--e
Confidence 556788998876653 234 6678899999888861 1112223 234455554444422222 156788 9
Q ss_pred CCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhh-------cCc---eeeEE---EeecCCC-------------
Q 015435 107 LSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTL-------AGL---SVKTY---RYYDPAT------------- 160 (407)
Q Consensus 107 ~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~-------~G~---~~~~v---~~~~~~~------------- 160 (407)
+||++|+.+++++.+.+.+-..||+.+-.|.++...... .|. ++.+| |+.|-..
T Consensus 109 NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~ 188 (452)
T KOG1403|consen 109 NSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADM 188 (452)
T ss_pred cCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccc
Confidence 999999999988888777666788888888777553321 111 11111 2211000
Q ss_pred CCcChhhHHHHHHc---CCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHH
Q 015435 161 RGLNFQGLLEDLRA---APSGAIVLLHACAHNPTGVD-PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVR 236 (407)
Q Consensus 161 ~~~d~~~l~~~i~~---~~~~~~v~i~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~ 236 (407)
+..=.+++++.+.. .....+.++--+-+.=.|.+ .+....+++++..+.+|-+.|.||+.-+|+..+. ..|++.
T Consensus 189 ~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~--hyWafq 266 (452)
T KOG1403|consen 189 GALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGS--HYWAFQ 266 (452)
T ss_pred hhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccch--hhhhhh
Confidence 00112334443321 12222333323333334665 4456789999999999999999999999988653 455554
Q ss_pred HHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHH
Q 015435 237 MFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTL 316 (407)
Q Consensus 237 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 316 (407)
.+. .-.. +-++.|-+| .|.+++.+ ++. +++.+.+..-- ..-..+++.++.++.+..++|+-.+
T Consensus 267 ~y~-fiPD---IVtmgKpmG-NGhPVa~V--att-keIA~Af~atg--v~YFNTyGGnPVsCAv~laVm~v~e------- 329 (452)
T KOG1403|consen 267 TYN-FIPD---IVTMGKPMG-NGHPVAAV--ATT-KEIAQAFHATG--VEYFNTYGGNPVSCAVGLAVMRVCE------- 329 (452)
T ss_pred hhc-cccc---hheecccCC-CCCeeeEE--ecc-HHHHHHhcccc--ceehhccCCCchhHHHHHHHHHHHh-------
Confidence 432 1122 234789998 89999998 344 55444433200 1111234677888888887776332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC--CceeEEecCC---------CHH---H-HHHhHhhccEEEcCCC-
Q 015435 317 ELKAMADRIISMRQQLFDALSARGTPGDWSHIIK--QIGMFTFTGL---------NSE---Q-VAFMTKEYHIYMTSDG- 380 (407)
Q Consensus 317 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~--~~~~~~~~~~---------~~~---~-~~~~l~~~gi~~~~gg- 380 (407)
-+++.++..+.-++|...|+.+..+ .+.+.. ..|+|.=+++ +.+ . +.++-+.++|.++..|
T Consensus 330 -~E~Lq~ha~~vG~~L~~lL~~~k~k--h~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGP 406 (452)
T KOG1403|consen 330 -DENLQEHAQQVGEKLEVLLRRLKQK--HECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGP 406 (452)
T ss_pred -hhhHHHHHHHHHHHHHHHHHHHhhh--ccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCC
Confidence 2344455666667777777665421 333332 3455554433 112 1 3456666889998877
Q ss_pred -----eE--EecCCCCCChhHHHHHHHHHHH
Q 015435 381 -----RI--SMAGLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 381 -----Ri--s~~~~~~e~i~~~~~~l~~~l~ 404 (407)
.| -++ .++++.+..+..|.++|.
T Consensus 407 h~NilKiKPPmC-Fneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 407 HRNILKIKPPMC-FNEENADEFVLGLDEILT 436 (452)
T ss_pred CCceeecCCCcc-cChhhHHHHHHHHHHHHH
Confidence 22 233 367888888888888774
No 370
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.18 E-value=8.3e-09 Score=107.14 Aligned_cols=277 Identities=14% Similarity=0.119 Sum_probs=165.2
Q ss_pred cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcC--CCeEEecCCCCCChHHHH----hhcCcee
Q 015435 77 LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH--QLTIYIPQPTWGNHPKVF----TLAGLSV 150 (407)
Q Consensus 77 ~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~--gd~Vi~~~p~y~~~~~~~----~~~G~~~ 150 (407)
+.++++.++++. +. +..|+.+ +.++|.+.+.+.... .+.+ +++|++++..|+.....+ +..|+++
T Consensus 123 l~~~Qt~la~Lt-G~-----~~anaSl--~d~aTAa~ea~~~a~-~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev 193 (954)
T PRK05367 123 LLNFQTMVADLT-GL-----EIANASL--LDEATAAAEAMALAK-RVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEV 193 (954)
T ss_pred HHHHHHHHHHHH-CC-----Chhhccc--cccHHHHHHHHHHhh-hhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEE
Confidence 556677888877 53 3478999 999999999875222 2445 489999999999887765 4679999
Q ss_pred eEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCc
Q 015435 151 KTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDA 230 (407)
Q Consensus 151 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~ 230 (407)
+.++.. . |.+ . .....+++ .+| |-+|.+. ++++|+++|+++|+++++|.....+....
T Consensus 194 ~~~~~~-~-----d~~------~--~~~~~vlv-q~p-~~~G~i~---d~~~i~~~ah~~Gal~~vda~~~Al~~l~--- 251 (954)
T PRK05367 194 VVGDAA-K-----ALD------H--DDVFGVLL-QYP-GTSGEVR---DYTALIAAAHARGALVAVAADLLALTLLT--- 251 (954)
T ss_pred EEecCc-c-----CCC------c--ccEEEEEE-ecC-CCCeeec---cHHHHHHHHHHcCCEEEEEehhhhccCCC---
Confidence 999873 1 111 1 23444444 343 6789865 69999999999999999987543333221
Q ss_pred hhHHHHHHHHcCCcEEEEEecCcc-----ccccCCCcceeEEeecChhhHHHHHHHHhh------h--------------
Q 015435 231 DAQSVRMFVADGGECLVAQSYAKN-----MGLYGERVGALSIVCKTEDVASRVESQLKL------V-------------- 285 (407)
Q Consensus 231 ~~~~~~~~~~~~~~~i~~~s~sK~-----~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~------~-------------- 285 (407)
+ +..-...++++|..|. +|.| ..|++ .+. +++.+.+-.++-. .
T Consensus 252 ---~----pge~GaDi~vgs~qkfg~P~g~GGP--~aGfl--avr-~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqh 319 (954)
T PRK05367 252 ---P----PGEMGADIAVGSAQRFGVPMGFGGP--HAAYF--AVR-DAYKRSMPGRIVGVSVDAAGNPALRLALQTREQH 319 (954)
T ss_pred ---C----hhhcCCCEEEeeCcccCCCCCCCCC--CEEEE--EEC-HHHHhhCCCCeeeeecccCCCccccccccccccc
Confidence 1 1223446777777786 4444 47888 455 2322222111100 0
Q ss_pred hhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc-CCceeEEec-CCCHH
Q 015435 286 IRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHII-KQIGMFTFT-GLNSE 363 (407)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~-~~~~~ 363 (407)
++....+++.....++...+...-+...-...+++..++...+..++.+.|...| +++.. +..+.+.+. +.+.+
T Consensus 320 iRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G----~~~~~~~~f~~~~~~~~~~~~ 395 (954)
T PRK05367 320 IRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALG----LEVVHDSFFDTLTVEVGGDAA 395 (954)
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcC----cccCCCCCCCeEEEeCCCCHH
Confidence 0111112222222222222211000000014577888999999999999998776 33321 112223222 33566
Q ss_pred HHHHhHhhccEEEcCC--C--eEEecC-CCCCChhHHHHHHH
Q 015435 364 QVAFMTKEYHIYMTSD--G--RISMAG-LSSKTVPHLTDAIH 400 (407)
Q Consensus 364 ~~~~~l~~~gi~~~~g--g--Ris~~~-~~~e~i~~~~~~l~ 400 (407)
.+.+.|.++||.+... + |||+.. .+++||+++++.+.
T Consensus 396 ~i~~~l~~~gi~~~~~~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 396 AVLARALAAGINLRRVDDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred HHHHHHHHCCceeccccCCEEEEEecccCCHHHHHHHHHHHc
Confidence 6666667789988543 2 888765 36789999999986
No 371
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.10 E-value=4.3e-08 Score=87.28 Aligned_cols=310 Identities=13% Similarity=0.120 Sum_probs=188.4
Q ss_pred cccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhh---cCCCeEEec-CCCCCChHHHH
Q 015435 68 VKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARH---YHQLTIYIP-QPTWGNHPKVF 143 (407)
Q Consensus 68 ~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~---~~gd~Vi~~-~p~y~~~~~~~ 143 (407)
...|..+.+...|+.++.+.+ +- +.++. |+-|.+|-.+++.++... .+|....++ +..|.......
T Consensus 72 DEAYagsrs~~~L~~avkdif-Gf-------q~~iP--thQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~ 141 (471)
T COG3033 72 DEAYAGSRSYYALADAVKDIF-GF-------QYTIP--THQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHI 141 (471)
T ss_pred chhhcccccHHHHHHHHHHhc-Cc-------eeeee--ccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHH
Confidence 345888889999999999987 63 66777 999999988876555221 144433344 45566677788
Q ss_pred hhcCceeeEEEeecCC--------CCCcChhhHHHHHHcC--CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCce
Q 015435 144 TLAGLSVKTYRYYDPA--------TRGLNFQGLLEDLRAA--PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLL 213 (407)
Q Consensus 144 ~~~G~~~~~v~~~~~~--------~~~~d~~~l~~~i~~~--~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~ 213 (407)
+..|..++.++.+... .+.+|++.|++.|.+. .+.+.|+++.+.|.-.|.-.|.+.+++..++|++|++.
T Consensus 142 ~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ip 221 (471)
T COG3033 142 QINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIP 221 (471)
T ss_pred HhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCc
Confidence 8899988888764211 2457999999999864 34577777667677789999999999999999999999
Q ss_pred eeecccc-ccccC----CCCCchhHHHHHHHH----cCCcEEEEEecCccccccCCCcceeEEeecChh---hHHHHHHH
Q 015435 214 PFFDSAY-QGFAS----GSLDADAQSVRMFVA----DGGECLVAQSYAKNMGLYGERVGALSIVCKTED---VASRVESQ 281 (407)
Q Consensus 214 li~D~~y-~~~~~----~~~~~~~~~~~~~~~----~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~---~~~~~~~~ 281 (407)
++.|.+- .+-.+ .+..-..|++..+.. ..|. +.-|..|- ++.-+. |++ ...|+. +...+...
T Consensus 222 vv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~--~~mS~KKD-~lvnmG-Gfl--~~~D~~~fDvy~~~~~~ 295 (471)
T COG3033 222 VVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADG--CTMSAKKD-GLVNMG-GFL--CFKDDSFFDVYEECRTL 295 (471)
T ss_pred EEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhh--heeecccc-ceeccc-cEE--EecCccHHHHHHHHHhh
Confidence 9999983 33222 111223456555432 1222 22344443 322221 455 455553 33332221
Q ss_pred Hhhh-hhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEecCC
Q 015435 282 LKLV-IRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGL 360 (407)
Q Consensus 282 ~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 360 (407)
.-.. ..+.+.+...-.+.+.+.-|.+.- . .+++... -++.+||.+.|.+.| +.+..|.||=-+|++.
T Consensus 296 ~V~~eG~~tYGgl~GrdmealAvGL~e~~-~---~~yl~~R----v~Qv~YL~~~l~~~G----Vpi~~paGGHavfvda 363 (471)
T COG3033 296 VVVQEGFPTYGGLAGRDMEALAVGLREGV-N---FDYLAHR----VAQVQYLADGLEEAG----VPIVQPAGGHAVFVDA 363 (471)
T ss_pred eEeeccccccCcccchhHHHHHHHHHHhc-C---cHHHHHH----HHHHHHHHHHHHhcC----CeeEecCCCceEEeeh
Confidence 1100 011112333333444443343321 0 0223322 235689999999999 6677787776666632
Q ss_pred ------------CHHH-HHHhHhhccEEEcCCC---------------------eEEecC--CCCCChhHHHHHHHHHHH
Q 015435 361 ------------NSEQ-VAFMTKEYHIYMTSDG---------------------RISMAG--LSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 361 ------------~~~~-~~~~l~~~gi~~~~gg---------------------Ris~~~--~~~e~i~~~~~~l~~~l~ 404 (407)
.++. +.++-.+.||....-| |+++.. .+.+-++..++.++.+.+
T Consensus 364 ~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e 443 (471)
T COG3033 364 GKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKE 443 (471)
T ss_pred hhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHh
Confidence 2333 4456677888765422 777654 355778888888888765
Q ss_pred h
Q 015435 405 R 405 (407)
Q Consensus 405 ~ 405 (407)
+
T Consensus 444 ~ 444 (471)
T COG3033 444 N 444 (471)
T ss_pred c
Confidence 3
No 372
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.10 E-value=7.1e-08 Score=84.91 Aligned_cols=343 Identities=15% Similarity=0.125 Sum_probs=199.0
Q ss_pred CCCchhhhhHhhhhcCCCCeeeeeeeeeecCCCccccchhHHHHHHHHhcccc---ccccCC-CCCC----cHHHHHHHH
Q 015435 14 PEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQS---RVKEYL-PIVG----LVDFNKLSA 85 (407)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~y~-~~~g----~~~l~~~~a 85 (407)
-.+++.+.+..+..+ ..+|-|..+. .| ..|.....+.++... +.. ....+. .... -..+-.+++
T Consensus 15 a~dpl~~lr~~f~lp--~~viyLdgnS----LG-a~p~~~~a~~~q~a~-deW~~~lirsw~~a~~~W~~lp~~lgdklA 86 (407)
T COG3844 15 AADPLAKLRDRFALP--GGVIYLDGNS----LG-ARPRAVTARLQQVAT-DEWGEGLIRSWNKAKADWFDLPERLGDKLA 86 (407)
T ss_pred ccCchhhhHhhccCC--CCeEEeeccc----cc-cCchHHHHHHHHHHH-HHHHhhhhhhhcccCCchhhchhHHHHHhh
Confidence 345566666655433 4666666554 35 556566665555443 110 111111 0111 123344455
Q ss_pred HHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhh--cCCCeEEecCC-CCCChHH----HHhhcCceeeEEEeecC
Q 015435 86 KLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARH--YHQLTIYIPQP-TWGNHPK----VFTLAGLSVKTYRYYDP 158 (407)
Q Consensus 86 ~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~--~~gd~Vi~~~p-~y~~~~~----~~~~~G~~~~~v~~~~~ 158 (407)
-++ +. .+.++++ +.+++--+.-+ +...+ .+|++||+++- +|+.-.. .+...|.. +++
T Consensus 87 pLi-GA-----~~~Evvv--~dtts~nl~k~--L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~~~--- 150 (407)
T COG3844 87 PLI-GA-----RAGEVVV--TDTTSINLFKV--LAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG---YDL--- 150 (407)
T ss_pred hhh-cC-----CCCceEE--eCCcchHHHHH--HHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc---ccc---
Confidence 555 32 2578888 87777666655 33334 46999999984 3433222 33333322 222
Q ss_pred CCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHH
Q 015435 159 ATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMF 238 (407)
Q Consensus 159 ~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~ 238 (407)
...+.++++++.+. ....++++ ++.+.-||..+ ++.+|-.+++++|++++.|-+++..... . +
T Consensus 151 -~~~~~P~~~~~~~~--dd~AvV~L-~~V~y~TGql~---dm~aiT~~AH~~galv~wDLAHsaGavp-~--~------- 213 (407)
T COG3844 151 -EGVIAPRALEEAIT--DDVAVVLL-SHVNYKTGQLL---DMRAITALAHQHGALVGWDLAHSAGAVP-V--D------- 213 (407)
T ss_pred -eeeeChHHHHHhhc--cceEEEEe-cccccccccee---eHHHHHHHHHhcCceEEeehhcccCCcc-e--e-------
Confidence 13457778999887 55666666 88899999977 5888888899999999999998755432 1 1
Q ss_pred HHcCCcEEEEEecCcccc-ccCCCcceeEEeecChhhHHHHHHH-------------------HhhhhhcccCCCChhHH
Q 015435 239 VADGGECLVAQSYAKNMG-LYGERVGALSIVCKTEDVASRVESQ-------------------LKLVIRPMYSSPPIHGA 298 (407)
Q Consensus 239 ~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~v~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~ 298 (407)
....+..+-+++-.|.++ .||-. +++. +.+ +..++.... .....+..+.+++.+++
T Consensus 214 Lh~~gaDfaigcsyKYLNgGPGap-a~l~-v~~--~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~ 289 (407)
T COG3844 214 LHAAGADFAIGCSYKYLNGGPGAP-AGLF-VAP--RHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSL 289 (407)
T ss_pred ecccCCCeeeeeeceeccCCCCCc-eeEE-ecc--ccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhh
Confidence 122344566777788875 24433 2331 222 111222111 12223334445566666
Q ss_pred HHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC-----CceeEEecCCCHHHHHHhHhhcc
Q 015435 299 SIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIK-----QIGMFTFTGLNSEQVAFMTKEYH 373 (407)
Q Consensus 299 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~g 373 (407)
.++...|+--. . -.+.++|++-....+++.+.++....-..+....| .|+-..+.--....+.+.|.++|
T Consensus 290 aal~~aLDifa---~--~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~~~~V~qaLi~rG 364 (407)
T COG3844 290 AALEGALDIFA---D--VDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPHGYQVMQALIDRG 364 (407)
T ss_pred HHHhhhhhhhh---h--cCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCcHHHHHHHHHHcC
Confidence 66655554221 1 12678889888999999999987532112444444 34444444336677887778899
Q ss_pred EEEcC--CC--eEEecC--CCCCChhHHHHHHHHHHHhh
Q 015435 374 IYMTS--DG--RISMAG--LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 374 i~~~~--gg--Ris~~~--~~~e~i~~~~~~l~~~l~~~ 406 (407)
|...- -+ |+.+.. ++..|+=.+++.|.++++.+
T Consensus 365 VigD~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 365 VIGDFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred ccccccCCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 97632 22 887764 47799999999999998753
No 373
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.01 E-value=7.8e-08 Score=88.65 Aligned_cols=303 Identities=10% Similarity=0.079 Sum_probs=177.0
Q ss_pred CcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhc---CC---CeEEecCCCCCChHHHHhhcCce
Q 015435 76 GLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY---HQ---LTIYIPQPTWGNHPKVFTLAGLS 149 (407)
Q Consensus 76 g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~---~g---d~Vi~~~p~y~~~~~~~~~~G~~ 149 (407)
+..++..+..+.+.+..+.+ ++.-=.. |.|+|+++.++-+-..... .| ..+++++..+..+....+.++++
T Consensus 117 ~~~~~e~~~Vnm~~~L~~~~-~~~~g~~--t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~ 193 (491)
T KOG1383|consen 117 VVRKLEAECVNMIANLFNAP-SDSCGCG--TVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVE 193 (491)
T ss_pred hhHHHHHHHHHHHHHHhcCC-ccccCcc--ccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEE
Confidence 34444444444443333322 1223334 8899999665533322221 12 34677777788888888899999
Q ss_pred eeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHH-cCceeeeccccccccCCCC
Q 015435 150 VKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRS-KGLLPFFDSAYQGFASGSL 228 (407)
Q Consensus 150 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~-~~~~li~D~~y~~~~~~~~ 228 (407)
+..||++ +..+.+|+.++.+.++ +++.+++. .-|+.|+|. .+++++|.++..+ +++.+-+|.+-.+|...
T Consensus 194 l~~V~~~-~~~~~~D~~k~~~~i~--eNti~lv~-~~~~~p~G~---~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p-- 264 (491)
T KOG1383|consen 194 LREVPLD-EGDYRVDPGKVVRMID--ENTIMLVG-SLPNFPTGE---IEDVEKLADLLLEIWDIPIHVDACLGGFINP-- 264 (491)
T ss_pred EEeeecc-ccceEecHHHHHHHhc--cceEEEEE-EcCCCCccc---hhhHHHHHHHHHHHhCCceeecccCcccccc--
Confidence 9999994 6779999999999998 66777666 789999999 7899999999998 99999999998888752
Q ss_pred CchhHHHHHHHHcCCcEE-EEE-ecCccccccCCCcceeEEeecChhhHHH-HH---HHHhhhhhcccCCCChh-----H
Q 015435 229 DADAQSVRMFVADGGECL-VAQ-SYAKNMGLYGERVGALSIVCKTEDVASR-VE---SQLKLVIRPMYSSPPIH-----G 297 (407)
Q Consensus 229 ~~~~~~~~~~~~~~~~~i-~~~-s~sK~~~~~G~r~G~~~~v~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~-----~ 297 (407)
........+ +.....+ .+. +-+| ||+.--.+||+ +-.++++... +. +.+.......+.+.+.. +
T Consensus 265 -~~~~~~~~f-dFr~p~V~Sisa~~HK-YGl~~~G~~~v--l~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~ 339 (491)
T KOG1383|consen 265 -AGYLNEEEF-DFRVPGVTSISADGHK-YGLAPAGSSWV--LYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAA 339 (491)
T ss_pred -ccccCcccc-ccCCCCceeEeeccce-eeeeecCcEEE--EEcccccccceEEEeccccCccccCcccccCCcccHHHH
Confidence 000111111 1112222 222 2233 55544457888 4565543221 11 11111111222233333 3
Q ss_pred HHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc-cCCceeEEec--CCCHHHHHHhHhhccE
Q 015435 298 ASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHI-IKQIGMFTFT--GLNSEQVAFMTKEYHI 374 (407)
Q Consensus 298 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~l~~~gi 374 (407)
|.++. +..+. +...+.-+.+.+....|.+.+++.+. +... .|..++..|- .++.=.+..+|.++|.
T Consensus 340 ~wa~~--~~lG~------eGY~~~~~~ive~~~~l~egie~i~~---i~i~gkp~vs~~~~~s~~~~i~elsd~l~~~GW 408 (491)
T KOG1383|consen 340 QWAAL--MSLGE------EGYRENTQNIVETARKLREGIENIKG---IKIVGKPLVSFILFGSNDVNIFELSDLLRKKGW 408 (491)
T ss_pred HHHHH--HHhhH------HHHHHHHHHHHHHHHHHHHhhhcccc---ceecCCCcEEEEEccCCccchhhhhHHHHhcCc
Confidence 33333 22221 33445556677888889999988753 4433 4555544443 2233335677777887
Q ss_pred EEcC----CC-eEEecC--CCCCChhHHHHHHHHHHHhh
Q 015435 375 YMTS----DG-RISMAG--LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 375 ~~~~----gg-Ris~~~--~~~e~i~~~~~~l~~~l~~~ 406 (407)
.+.. .+ .|++.. ..++-.++++.-|+++++++
T Consensus 409 ~lnalq~P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el 447 (491)
T KOG1383|consen 409 ILNALQFPAAIHICVTRVHAREDVADRFVADIRKVVEEL 447 (491)
T ss_pred CccccCCCCceEEEEEeeeccHHHHHHHHHHHHHHHHHH
Confidence 7643 23 565543 22333578888888877654
No 374
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.00 E-value=4.2e-08 Score=85.25 Aligned_cols=166 Identities=16% Similarity=0.253 Sum_probs=115.8
Q ss_pred CcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecC-CCCCChHHHH----------h
Q 015435 76 GLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQ-PTWGNHPKVF----------T 144 (407)
Q Consensus 76 g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~-p~y~~~~~~~----------~ 144 (407)
|-+.|.+--|+.+ +.. ..++-.+.-+||+|+..+ +...+.|||+.+... .-|....+++ +
T Consensus 66 GRdtLe~vyA~vf-~aE------~a~VRpq~isGTHAI~~a--Lfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~ 136 (416)
T COG4100 66 GRDTLERVYAQVF-GAE------AALVRPQIISGTHAIACA--LFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLK 136 (416)
T ss_pred chhHHHHHHHHHh-ccc------cceeeeeeecchhHHHHH--HHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHH
Confidence 4445555555544 432 222224566799999998 577899999987654 3455454443 4
Q ss_pred hcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc--Cceeeecccccc
Q 015435 145 LAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSK--GLLPFFDSAYQG 222 (407)
Q Consensus 145 ~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~--~~~li~D~~y~~ 222 (407)
.+|++.+.+|++ ..+.+|.+.+.+.+. ++++++.|.-+....---.++.+++++++++.++- ++++++|.+|.+
T Consensus 137 dfgi~Y~~v~Lt--~~gkiD~~~v~~~i~--~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGE 212 (416)
T COG4100 137 DFGIKYKAVPLT--ADGKIDIQAVKTAIS--DRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGE 212 (416)
T ss_pred HhCcceeecccc--cCCcccHHHHHHhcC--ccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchh
Confidence 567888889884 347899999999998 78999999655444444458899999999999985 699999999999
Q ss_pred ccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCC-Cc-cee
Q 015435 223 FASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGE-RV-GAL 265 (407)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-r~-G~~ 265 (407)
|+..- ++. +-...+..+|+-|+-| .|+ .. ||+
T Consensus 213 FvE~~---EPt-------~vGaDliAGSLIKNpG-GgiaktGGYi 246 (416)
T COG4100 213 FVEEK---EPT-------HVGADLIAGSLIKNPG-GGIAKTGGYI 246 (416)
T ss_pred hhhcc---Ccc-------ccchhhhccceeeCCC-Cceeecccee
Confidence 99642 111 1234577899999876 343 33 555
No 375
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.98 E-value=3.6e-07 Score=83.67 Aligned_cols=141 Identities=16% Similarity=0.232 Sum_probs=104.6
Q ss_pred ccccCCC---CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhc--CC----CeEEecCCCCC
Q 015435 67 RVKEYLP---IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY--HQ----LTIYIPQPTWG 137 (407)
Q Consensus 67 ~~~~y~~---~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~--~g----d~Vi~~~p~y~ 137 (407)
..|.|.| .+|+.++...+.+|+...-+. +.|.+ |-+.|.++=..-+.+.+... .| +.+++|+..+.
T Consensus 94 ~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~----DavsL-QP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHG 168 (496)
T COG1003 94 NIHPFQPEEQVQGYLELIYELQEWLKEITGM----DAVSL-QPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHG 168 (496)
T ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHHhcCC----ceeec-cCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccC
Confidence 4566766 557888888888888444332 44444 55666665554432333332 33 56999999999
Q ss_pred ChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeec
Q 015435 138 NHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFD 217 (407)
Q Consensus 138 ~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D 217 (407)
.....+..+|.+|+.|++ .+++.+|+++|++++. .+..+++| .+|+ --|+. .+++.+|+++.+++|..|..|
T Consensus 169 TNPASAam~G~~VV~V~~--~~~G~VDlddLk~k~~--~~~AalMi-TnPs-T~GvF--E~~I~ei~~ivH~~Gg~vY~D 240 (496)
T COG1003 169 TNPASAAMAGFKVVVVKC--DENGNVDLDDLRAKAE--DNLAALMI-TNPS-TLGVF--EEDIREICEIVHEAGGQVYYD 240 (496)
T ss_pred CChhhHhhcCceEEEEec--CCCCCccHHHHHHHhc--cceeEEEe-ccCc-ccccc--hhhHHHHHHHHHHcCCEEEec
Confidence 999999999999999999 4457899999999998 67888888 4444 12443 789999999999999999999
Q ss_pred ccc
Q 015435 218 SAY 220 (407)
Q Consensus 218 ~~y 220 (407)
.+-
T Consensus 241 GAN 243 (496)
T COG1003 241 GAN 243 (496)
T ss_pred Ccc
Confidence 984
No 376
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.94 E-value=1.3e-07 Score=84.41 Aligned_cols=271 Identities=19% Similarity=0.242 Sum_probs=158.3
Q ss_pred eecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCCh-HHHHhhcCcee---------eEEEeecCCCCCcChhhHHHHHH
Q 015435 104 VQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNH-PKVFTLAGLSV---------KTYRYYDPATRGLNFQGLLEDLR 173 (407)
Q Consensus 104 ~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~-~~~~~~~G~~~---------~~v~~~~~~~~~~d~~~l~~~i~ 173 (407)
+|.-||+.|+..+. ...+.|+|+|+-.+.-..++ .....--+-++ -++.+ ++.++-+|.+.|++...
T Consensus 110 VQp~SGSPANfavY--tall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv-~~~TG~IDYD~Le~~A~ 186 (477)
T KOG2467|consen 110 VQPYSGSPANFAVY--TALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKV-DPSTGYIDYDKLEKTAT 186 (477)
T ss_pred eccCCCCchhhHHH--hhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceee-CCCCCceehHHHHHHHH
Confidence 56788899998884 55588999998766222222 11111111222 22333 56778899999998766
Q ss_pred cCCCCcEEEEecCCCCCCCCCCC-HHHHHHHHHHHHHcCceeeecccc-ccccCCCCCchhHHHHHHHHcCCcEEEEEec
Q 015435 174 AAPSGAIVLLHACAHNPTGVDPT-LEQWEQIRQLMRSKGLLPFFDSAY-QGFASGSLDADAQSVRMFVADGGECLVAQSY 251 (407)
Q Consensus 174 ~~~~~~~v~i~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~D~~y-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 251 (407)
.-++.++|-.. ..++ .-|-.++.++|.+.|.+|.+|-++ ++++..+. ..+.. .-..|+..+.
T Consensus 187 --~frPk~iiaG~------SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~v---ipsPF-----ey~DiVTTTT 250 (477)
T KOG2467|consen 187 --LFRPKLIIAGT------SAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGV---IPSPF-----EYCDIVTTTT 250 (477)
T ss_pred --hcCCcEEEecc------ccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhccc---CCCcc-----cccceeeccc
Confidence 44566566221 1222 236778888899999999999997 55554331 11111 1234777888
Q ss_pred CccccccCCCcceeEEeec----C----hhhHHHHHHHHhhhhhcccC-CCChhHHHHHHHHhcChhhHHhHHHHHHHHH
Q 015435 252 AKNMGLYGERVGALSIVCK----T----EDVASRVESQLKLVIRPMYS-SPPIHGASIVATILKDSTMYKEWTLELKAMA 322 (407)
Q Consensus 252 sK~~~~~G~r~G~~~~v~~----~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 322 (407)
.|.+ .|-|-|.+.+--. + .+..-.+.++++....+..- +|....+.+.+-+|.... .....+..
T Consensus 251 HKsL--RGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~-----tpefk~Yq 323 (477)
T KOG2467|consen 251 HKSL--RGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAM-----TPEFKEYQ 323 (477)
T ss_pred cccc--cCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhC-----CHHHHHHH
Confidence 9975 6888777632110 1 11122344444433322222 344333443333343211 12345566
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcccccCC--ceeEEe----cCCCHHHHHHhHhhccEEEc------------CCC-eEE
Q 015435 323 DRIISMRQQLFDALSARGTPGDWSHIIKQ--IGMFTF----TGLNSEQVAFMTKEYHIYMT------------SDG-RIS 383 (407)
Q Consensus 323 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~l~~~gi~~~------------~gg-Ris 383 (407)
+++.+|.+.|.+.|.+.| +...... .-+.+| .+++...+...|+..+|.+. ||| ||.
T Consensus 324 ~qV~~Nakala~~l~~~G----y~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiG 399 (477)
T KOG2467|consen 324 KQVLKNAKALASALISRG----YKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIG 399 (477)
T ss_pred HHHHHHHHHHHHHHHHcC----ceEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceecc
Confidence 677789999999999998 5554332 222333 16688888888888888663 445 885
Q ss_pred ec-----CCCCCChhHHHHHHHHHHH
Q 015435 384 MA-----GLSSKTVPHLTDAIHAAVT 404 (407)
Q Consensus 384 ~~-----~~~~e~i~~~~~~l~~~l~ 404 (407)
.. +..++|+++..+-|.++++
T Consensus 400 tPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 400 TPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred chhhcccCccHHHHHHHHHHHHHHHH
Confidence 32 2356888888888877653
No 377
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.93 E-value=2.3e-06 Score=84.84 Aligned_cols=276 Identities=12% Similarity=0.078 Sum_probs=154.2
Q ss_pred cccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhc--C
Q 015435 48 PLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY--H 125 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~--~ 125 (407)
+.++..+..++..+- ++ ....|...++-..+.+.+.+++....+.+ ...-.+ |+|||+|+..++...+... |
T Consensus 94 ~~~paila~~~a~~~-N~-n~~~~e~SP~~t~lE~~vi~~la~l~G~~--~~~G~~--TsGGT~ANl~aL~~AR~~k~~p 167 (608)
T TIGR03811 94 TLMPAILAYNYAMLW-NG-NNVAYESSPATSQMEEEVGKEFATLMGYK--NGWGHI--VADGSLANLEGLWYARNIKSLP 167 (608)
T ss_pred CCHHHHHHHHHHHHh-CC-CCCccccCchHHHHHHHHHHHHHHHhCCC--CCCeEE--eCChHHHHHHHHHHHHHhhhcc
Confidence 344445555544444 22 23334334455566666666663333322 233457 9999999987754443321 0
Q ss_pred ------------------------------------------------C------CeEEecCCCCCChHHHHhhcCc---
Q 015435 126 ------------------------------------------------Q------LTIYIPQPTWGNHPKVFTLAGL--- 148 (407)
Q Consensus 126 ------------------------------------------------g------d~Vi~~~p~y~~~~~~~~~~G~--- 148 (407)
| -++++++..|.++.+++...|+
T Consensus 168 ~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~ 247 (608)
T TIGR03811 168 FAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLD 247 (608)
T ss_pred chhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcc
Confidence 0 0578888889999999999999
Q ss_pred eeeEEEeecCCCCCcChhhHHHHHHcC--CC-CcEEEEecCCCCCCCCCCCHHHHHHHHHHH---HHcCc--eeeecccc
Q 015435 149 SVKTYRYYDPATRGLNFQGLLEDLRAA--PS-GAIVLLHACAHNPTGVDPTLEQWEQIRQLM---RSKGL--LPFFDSAY 220 (407)
Q Consensus 149 ~~~~v~~~~~~~~~~d~~~l~~~i~~~--~~-~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~---~~~~~--~li~D~~y 220 (407)
+++.||+ +.++.+|++.|++.+.+. .. .++.+|-+-+...+|. .+++++|+++| +++|+ ++.+|.||
T Consensus 248 ~vv~Vpv--D~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~Ga---iDpl~eI~~l~~~~~~~gl~~~lHVDAAy 322 (608)
T TIGR03811 248 QVIPVPV--DSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGA---VDGIDKIVALRNKLMKEGIYFYLHVDAAY 322 (608)
T ss_pred cEEEeec--CCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcc---cCCHHHHHHHHHHHHHcCCceeEeeeccc
Confidence 5899998 345789999999988642 22 3344444566777888 45566666666 78897 69999999
Q ss_pred cccc---CCCCC---------------------chh---HHHH-HHHHcCCcEEEEEecCccccccCCCcceeEEeecCh
Q 015435 221 QGFA---SGSLD---------------------ADA---QSVR-MFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTE 272 (407)
Q Consensus 221 ~~~~---~~~~~---------------------~~~---~~~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~ 272 (407)
.++. +-+.. ... .... .+..-....-+.-.++|.+.. -..+|.+ +.+|+
T Consensus 323 GG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~-Py~~G~l--l~Rd~ 399 (608)
T TIGR03811 323 GGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYI-PYSAGGI--VIQDI 399 (608)
T ss_pred cchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCccccccc-CCCeEEE--EEeCH
Confidence 8863 11000 000 0011 111112333445678998764 4677888 68887
Q ss_pred hhHHHHHHHHhhhhh-----------cccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015435 273 DVASRVESQLKLVIR-----------PMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSAR 339 (407)
Q Consensus 273 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 339 (407)
...+.+.. ...+.. ......+..+..++..++....+ ..=.+.+.++.++..+.++++.+.|+..
T Consensus 400 ~~~~~~~~-~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l-~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 400 RMRDVISY-FATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVL-PLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred HHHHHHhc-CcchhccccccCcccccccceecCCccHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 64443211 111110 00112233332222222211100 0001456677777778888888888774
No 378
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.92 E-value=5.9e-07 Score=82.50 Aligned_cols=216 Identities=15% Similarity=0.117 Sum_probs=136.3
Q ss_pred CCeeeeeeeeeecCCCccc-cchhHHHHHHHHhccccccccCCCCCC--cHHHHHHHHHHHhCCCCCCCCCCceEEeecC
Q 015435 31 PVKLNLGVGAYRTEEGKPL-VLNVVRKAEQLLVNDQSRVKEYLPIVG--LVDFNKLSAKLILGADSPAIKDNRVTTVQCL 107 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~y~~~~g--~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~ 107 (407)
+.+||++.-..+.+.|.+. .++.+++....+. ......|.-..| ..+++ .+++...+..+ .+.+.+ ++
T Consensus 20 ~~viN~~G~v~~t~lG~s~~~~e~iea~~~~~~--~~v~Le~~l~~g~~~~R~~-~~~~~~~~~~~----aea~~i--vn 90 (395)
T COG1921 20 RRVINAIGTVLMTNLGRSLYSPEAIEAMKEAMR--APVELETDLKTGKRGARLT-ELAELLCGLTG----AEAAAI--VN 90 (395)
T ss_pred hhhhhhhhhheeccCCCccCCHHHHHHHHHHhc--ccceeeeecccchhhHHHH-HHHHHHhcccc----hhheee--EC
Confidence 5677776544445555454 4566665555554 222225544444 22333 34444444432 377888 99
Q ss_pred CcccHHHHHHHHHHhhcCCCeEEecC-----CCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEE
Q 015435 108 SGTGSLRVGAEFLARHYHQLTIYIPQ-----PTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVL 182 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~~gd~Vi~~~-----p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~ 182 (407)
..+.|+.++. . .+.++.+|++.- ++.++..++++..|++++.+-. .......+++.+|. +++.+++
T Consensus 91 nn~aAVll~~--~-al~~~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~----tn~t~~~d~~~AIn--e~ta~ll 161 (395)
T COG1921 91 NNAAAVLLTL--N-ALAEGKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGT----TNRTHLKDYELAIN--ENTALLL 161 (395)
T ss_pred CcHHHHHHHH--h-hhccCCeEEEEccccccCCCCChhHHHHHcCCEEEEecc----cCcCCHHHHHHHhc--cCCeeEE
Confidence 9999988873 3 333455555432 5788899999999999999954 34578899999998 6677766
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCc
Q 015435 183 LHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERV 262 (407)
Q Consensus 183 i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 262 (407)
-+.+.|.+--..++ +++++++|+++|+.+|+|.+-...+.. .+.++.+.. ....++++|-.|.++ |.+-
T Consensus 162 kV~s~~~~f~~~l~---~~~l~~ia~~~~lpvivD~aSg~~v~~-----e~~l~~~la-~GaDLV~~SgdKllg--GPqa 230 (395)
T COG1921 162 KVHSSNYGFTGMLS---EEELVEIAHEKGLPVIVDLASGALVDK-----EPDLREALA-LGADLVSFSGDKLLG--GPQA 230 (395)
T ss_pred EEeecccccccccc---HHHHHHHHHHcCCCEEEecCCcccccc-----ccchhHHHh-cCCCEEEEecchhcC--CCcc
Confidence 65665553222344 555667799999999999996655542 223333333 234678899999986 6777
Q ss_pred ceeEEeecChhhHHHH
Q 015435 263 GALSIVCKTEDVASRV 278 (407)
Q Consensus 263 G~~~~v~~~~~~~~~~ 278 (407)
|.+ ++.+++.+++
T Consensus 231 Gii---~GkKelI~~l 243 (395)
T COG1921 231 GII---VGKKELIEKL 243 (395)
T ss_pred ceE---echHHHHHHH
Confidence 777 5555544443
No 379
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.92 E-value=2.6e-08 Score=89.58 Aligned_cols=329 Identities=15% Similarity=0.061 Sum_probs=183.0
Q ss_pred CCCCeeeeeeeeeecCCCccccchhHHHHHHHHhccc----cccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEe
Q 015435 29 TSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ----SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTV 104 (407)
Q Consensus 29 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~ 104 (407)
++.+++||.+..+ .+.....+..+.+...+.+-. +-..-|+...-+.++.+.+++++ |. ++.|+.
T Consensus 92 ~G~~~~N~aS~Nf---L~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~-G~------E~aivY- 160 (467)
T KOG1358|consen 92 DGKDVLNFASANF---LGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFM-GT------EDAIVY- 160 (467)
T ss_pred cCceeecccchhh---hhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhh-CC------cceeee-
Confidence 5678999998876 454446666666666664110 11122555555788899999999 65 256666
Q ss_pred ecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC-------CC
Q 015435 105 QCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA-------PS 177 (407)
Q Consensus 105 ~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~-------~~ 177 (407)
..|=+..-..+ -+....||-|.+..-........++...-.+.++..+ |.+++++.+.+. ++
T Consensus 161 -s~gF~ti~S~i---pafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhn-------dm~~lerll~E~~~~~~K~~k 229 (467)
T KOG1358|consen 161 -SYGFSTIESAI---PAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHN-------DMEDLERLLPEQEDEDQKNPK 229 (467)
T ss_pred -ccccchhhhcc---hhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCC-------CHHHHHHhccCcchhhhhccc
Confidence 44333332232 3445689998888877777777777777777777552 555665554322 11
Q ss_pred ---CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCcc
Q 015435 178 ---GAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKN 254 (407)
Q Consensus 178 ---~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 254 (407)
++..+++----.+||.+.+ +.+|+++..||-..+|.||.|+-...+........+ ...+..+-.++++|++-+
T Consensus 230 ~~~~Rrfiv~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH-~~v~~~~iDiv~~sm~~a 305 (467)
T KOG1358|consen 230 KALTRRFIVVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEH-FGVPITDIDIVTASMETA 305 (467)
T ss_pred cccceEEEEEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccccccCcccccc-CCCCccceeeeeeccccc
Confidence 1333333344556888664 888888899999999999998644433110011111 011224566888999888
Q ss_pred ccccCCCcceeEEeecChhhHHHH--HHHHhhhhhcccC-CCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHH
Q 015435 255 MGLYGERVGALSIVCKTEDVASRV--ESQLKLVIRPMYS-SPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQ 331 (407)
Q Consensus 255 ~~~~G~r~G~~~~v~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (407)
++..| |+. +++ ..+ ..++... .+..+ +.|+....++..++.-. ++.....+.++.....
T Consensus 306 las~G---gFc---~G~----~~i~~hQrLSg~-~Y~fSAslPp~la~aa~~ai~i~-------~~~p~~~~~L~~k~~~ 367 (467)
T KOG1358|consen 306 LASGG---GFC---AGK----SFIADHQRLSGS-GYCFSASLPPYLAGAAIKAILIE-------EWNPEIVQPLRAKVAK 367 (467)
T ss_pred ccccC---cee---ecc----eeeEeeeecccc-ceeeeccCchhhhhhHHHHHHHH-------hhCcchhhhhhccccc
Confidence 87554 454 331 111 2222221 11111 23333344444444322 1222344555556666
Q ss_pred HHHHHHhcCCCCCcccccCCceeEEecCC-----C--------HHHHHHhHhhccEEEcCC-------------C-eEEe
Q 015435 332 LFDALSARGTPGDWSHIIKQIGMFTFTGL-----N--------SEQVAFMTKEYHIYMTSD-------------G-RISM 384 (407)
Q Consensus 332 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~--------~~~~~~~l~~~gi~~~~g-------------g-Ris~ 384 (407)
+-+.|+.... +.+....-+....+.+ + .+.++..+.+ ++.+... + ||++
T Consensus 368 ~H~~l~~~s~---~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~ 443 (467)
T KOG1358|consen 368 FHAALSSNSG---FIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICV 443 (467)
T ss_pred cchhhhcCCc---eEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEE
Confidence 6666655321 3433322222222222 1 1224444454 6666442 1 9988
Q ss_pred cC-CCCCChhHHHHHHHHHHHh
Q 015435 385 AG-LSSKTVPHLTDAIHAAVTR 405 (407)
Q Consensus 385 ~~-~~~e~i~~~~~~l~~~l~~ 405 (407)
.. +++||++++.+.|+++...
T Consensus 444 ~a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 444 SAGMSEEELERAAELIKEVASA 465 (467)
T ss_pred eCCCCHHHHHHHHHHHHHHHHh
Confidence 65 7899999999999987654
No 380
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.82 E-value=5.6e-07 Score=82.62 Aligned_cols=285 Identities=14% Similarity=0.065 Sum_probs=148.7
Q ss_pred CceEEeecCCcccHHHHHH-HHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeec-CCCCCcChhhHHHHHHcCC
Q 015435 99 NRVTTVQCLSGTGSLRVGA-EFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYD-PATRGLNFQGLLEDLRAAP 176 (407)
Q Consensus 99 ~~i~~~~t~g~t~a~~~~~-~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~~d~~~l~~~i~~~~ 176 (407)
+..++ ++-+|+---.+. ..++.-..++.|+.+.-.+..-..++..+|.+++.+|... ++....|.+.+++.+++..
T Consensus 75 ~~~~~--vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G 152 (389)
T PF05889_consen 75 KSCFV--VPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEELG 152 (389)
T ss_dssp CEEEE--ESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHC
T ss_pred cceEE--EecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHhC
Confidence 45666 666655443332 1122123678999998665556677889999999998642 2233557888888887543
Q ss_pred CCcEEEEecCCCCCCCCCCCHH-HHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccc
Q 015435 177 SGAIVLLHACAHNPTGVDPTLE-QWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNM 255 (407)
Q Consensus 177 ~~~~v~i~~~p~NPtG~~~~~~-~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 255 (407)
....++++++ +++...... ++.+|+++|++||+..|+..||.--.. .-.+.+......+.-.+++-|.-|.|
T Consensus 153 ~~~iLcvltt---tscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~----~~~~~i~~a~~~GRvda~vqS~dkNF 225 (389)
T PF05889_consen 153 ADNILCVLTT---TSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSS----KCMHLIQQAWRVGRVDAFVQSTDKNF 225 (389)
T ss_dssp GGGEEEEEEE---SSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-H----HHHHHHHHHHHHSTCSEEEEEHHHHH
T ss_pred CCCeEEEEEe---cCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHH----HHHHHHHHHHhcCCcceeeeecCCCE
Confidence 4445455433 333333344 599999999999999999999963221 12334444445566678899999999
Q ss_pred cccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHH
Q 015435 256 GLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDA 335 (407)
Q Consensus 256 ~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 335 (407)
-.| +|--++.++++.....+.+..... .+..|.......+..|... .|..-+.++.+.+....+.+.++
T Consensus 226 ~VP---vGgai~As~~~~~i~~vs~~YpGR----as~sp~ld~~itLl~LG~~----g~~~ll~~r~~~f~~l~erl~~~ 294 (389)
T PF05889_consen 226 MVP---VGGAIMASFDPSGILAVSKEYPGR----ASASPSLDLFITLLSLGCT----GYGALLKERKASFPYLKERLKKW 294 (389)
T ss_dssp CEE---SSHEEEEESSHHHHHHHHHTSHSH----BTSHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Eec---CCCcEEEecCHHHHHHHHHHhhhh----hhcccchHHHHHHHHHhhh----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 643 344333677666554443322111 1133333333333333322 23333444444444444444444
Q ss_pred HHhcCCCCCcccccCCceeEEe-cCCC------HHHHHHhHhhccEE----EcCCC-------------eEEe---cCCC
Q 015435 336 LSARGTPGDWSHIIKQIGMFTF-TGLN------SEQVAFMTKEYHIY----MTSDG-------------RISM---AGLS 388 (407)
Q Consensus 336 l~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~l~~~gi~----~~~gg-------------Ris~---~~~~ 388 (407)
-++.+.- -.+.......+..- ..+. .-++-..|..++|. +.+.+ -+.+ .+++
T Consensus 295 aee~~e~-ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~ 373 (389)
T PF05889_consen 295 AEEVGER-LLETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMT 373 (389)
T ss_dssp HHHTTEE-BSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--
T ss_pred HHHhhhh-hcCCCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhCCC
Confidence 4444310 01111111222221 1221 23566777777773 33332 2332 3478
Q ss_pred CCChhHHHHHHHHHHH
Q 015435 389 SKTVPHLTDAIHAAVT 404 (407)
Q Consensus 389 ~e~i~~~~~~l~~~l~ 404 (407)
+||++.++++|+++++
T Consensus 374 ~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 374 REEVDYFVKRLDKIIK 389 (389)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999999875
No 381
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=98.80 E-value=8.1e-09 Score=83.84 Aligned_cols=66 Identities=14% Similarity=0.197 Sum_probs=56.7
Q ss_pred ccCCCCCCcHHHHHHHHHHHhCCCC--CCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCC
Q 015435 69 KEYLPIVGLVDFNKLSAKLILGADS--PAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGN 138 (407)
Q Consensus 69 ~~y~~~~g~~~l~~~~a~~~~~~~~--~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~ 138 (407)
..|.+..|.++||+++++++...++ ..+++++|++ |+|+++++++++ ...+.+||.|++++|+|+.
T Consensus 86 a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivv--t~Ga~~al~~l~--~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 86 ALFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVL--SAGATAANEIIM--FCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred hcCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEE--cCCHHHHHHHHH--HHHcCCCCEEEEeCCCCCC
Confidence 3488889999999999999966555 4577899999 999999999994 5558899999999999974
No 382
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.59 E-value=2.1e-05 Score=81.15 Aligned_cols=273 Identities=16% Similarity=0.183 Sum_probs=154.3
Q ss_pred cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhc--CCCeEEecCCCCCChHHHHh----hcCcee
Q 015435 77 LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY--HQLTIYIPQPTWGNHPKVFT----LAGLSV 150 (407)
Q Consensus 77 ~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~--~gd~Vi~~~p~y~~~~~~~~----~~G~~~ 150 (407)
+.++.+.++++. +. +..|..+ ..++|.+-+++.... ... ++++|++++-.|+.+...++ ..|+++
T Consensus 111 l~e~Qt~i~eLt-Gm-----~~aNaSl--~d~atA~aEa~~~a~-~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v 181 (939)
T TIGR00461 111 LLNFQTVVSDLT-GL-----PVANASL--LDEGTAAAEAMALSF-NVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEV 181 (939)
T ss_pred HHHHHHHHHHHH-CC-----Chhhhhc--cchhhHHHHHHHHHH-HhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEE
Confidence 556677777766 53 2357788 889999888774221 122 34789999999998887666 778888
Q ss_pred eEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCc
Q 015435 151 KTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDA 230 (407)
Q Consensus 151 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~ 230 (407)
+.++. +++++.+ ++..+++ .+| |-+|.+ +|+++|+++++++|.+++++.--..+..-.
T Consensus 182 ~~~~~----------~~l~~~~----~~~~v~~-q~P-n~~G~i---ed~~~i~~~~h~~gal~~~~ad~~al~ll~--- 239 (939)
T TIGR00461 182 IVVDC----------SDIKKAV----DVFGCLL-QYP-ATDGSI---LDYKQLIDALHSHKSLVSVAADLMALTLLT--- 239 (939)
T ss_pred EEEcH----------HHHhhcC----CEEEEEE-ECC-CCCeEE---ecHHHHHHHHHHcCCEEEEEechHHhCCcC---
Confidence 77743 3454433 3455555 344 346774 479999999999999999855332222210
Q ss_pred hhHHHHHHHHcCCcEEEEEecCccccc----cCCCcceeEEeecChhhHHHH---------------------HHHHhhh
Q 015435 231 DAQSVRMFVADGGECLVAQSYAKNMGL----YGERVGALSIVCKTEDVASRV---------------------ESQLKLV 285 (407)
Q Consensus 231 ~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~v~~~~~~~~~~---------------------~~~~~~~ 285 (407)
+ +....-.|++++ +|.||. .|-..|++ .+. +++.+.+ ..+-.++
T Consensus 240 ---~----Pge~GaDi~vg~-~q~fg~p~g~GGP~aG~~--a~~-~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhI 308 (939)
T TIGR00461 240 ---P----PGHYGADIVLGS-SQRFGVPMGYGGPHAAFF--AVK-DEYNRKMPGRIVGVSKDALGNTALRLALQTREQHI 308 (939)
T ss_pred ---C----HHHcCCcEEeeC-CCccCCCCCCCCCceeee--eec-HhhHhhCCCCceeEEecCCCCccceeecccccccc
Confidence 1 111122344443 444443 34446666 243 2222211 0000111
Q ss_pred hhcccCCCChhHHHHHHHHhcChhhHHhH--HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCceeEEe--cC--
Q 015435 286 IRPMYSSPPIHGASIVATILKDSTMYKEW--TLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTF--TG-- 359 (407)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~--~~-- 359 (407)
.+-. .+++.....++.+... .++-.| .+.++++.++...+..++.+.|.+.| ++...+ .+|-. +.
T Consensus 309 rRek-AtSNICt~qaL~a~~a--~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G----~~~~~~--~fF~~~~v~~~ 379 (939)
T TIGR00461 309 RRDK-ATSNICTAQVLLANVA--SSYCVYHGPKGLKNIARRIHSLTSILANGLENDP----HELINK--TWFDTLTVKVG 379 (939)
T ss_pred cccc-cCcchhHHHHHHHHHH--HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCC----CcccCC--CccceEEEEeC
Confidence 1111 1222222222221111 000000 14577888889999999999999988 454333 23321 12
Q ss_pred -CCHHHHHHhHhhccEEEcCCC----eEEecC-CCCCChhHHHHHHH
Q 015435 360 -LNSEQVAFMTKEYHIYMTSDG----RISMAG-LSSKTVPHLTDAIH 400 (407)
Q Consensus 360 -~~~~~~~~~l~~~gi~~~~gg----Ris~~~-~~~e~i~~~~~~l~ 400 (407)
.+.+.+.+.+.++||.+...+ ++|+.. .+++|++.+++.+.
T Consensus 380 ~~~~~~i~~~~~~~gi~l~~~~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 380 NGISSELLKAAEEFNINLRAVDTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred CCCHHHHHHHHHHCCCeeeecCCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 245666666677899887542 677665 46688998888884
No 383
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.53 E-value=7e-06 Score=75.09 Aligned_cols=220 Identities=14% Similarity=0.098 Sum_probs=128.2
Q ss_pred ceEEeecCCcccHHHHHHHHHHhhc--CC----------CeEE-ecCCCCCChHHHHhhcC---ceeeEEEeecCCCCCc
Q 015435 100 RVTTVQCLSGTGSLRVGAEFLARHY--HQ----------LTIY-IPQPTWGNHPKVFTLAG---LSVKTYRYYDPATRGL 163 (407)
Q Consensus 100 ~i~~~~t~g~t~a~~~~~~~~~~~~--~g----------d~Vi-~~~p~y~~~~~~~~~~G---~~~~~v~~~~~~~~~~ 163 (407)
+=++ ++||+-++-.+..+.+ .+ |+ +-|+ .++-++.+...++..+| -.++.|+. .+.+.+
T Consensus 161 DgIf--~pggsisn~Ya~~~Ar-yk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t--~e~Gkm 235 (510)
T KOG0629|consen 161 DGIF--APGGSISNMYAMNCAR-YKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHCIKVKT--DERGKM 235 (510)
T ss_pred Ccee--cCCchhHHHHHHHHHH-hhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCceeEEecc--cccCcc
Confidence 4556 7777666655532222 21 22 2243 34467888888888888 57778887 445789
Q ss_pred ChhhHHHHHHcCCCC---cEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHH
Q 015435 164 NFQGLLEDLRAAPSG---AIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVA 240 (407)
Q Consensus 164 d~~~l~~~i~~~~~~---~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~ 240 (407)
.+++|++.|.+...+ +.+ + |.+-.|.+.-.-++|..|+++|++|++|+.+|.||.+...-+. + +.. .+..
T Consensus 236 ~~~dLe~kile~k~kg~~Pf~-v--naTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~--k-~R~-kl~G 308 (510)
T KOG0629|consen 236 IPDDLEKKILEAKAKGGVPFF-V--NATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSR--K-HRH-KLTG 308 (510)
T ss_pred chHHHHHHHHHHHhcCCCCeE-E--EecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccCh--h-hHh-hccC
Confidence 999999998755333 343 2 2344565556678999999999999999999999976333211 1 111 1111
Q ss_pred cCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhh------hcccCCCChhHHHHHHHHhc---ChhhH
Q 015435 241 DGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVI------RPMYSSPPIHGASIVATILK---DSTMY 311 (407)
Q Consensus 241 ~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~---~~~~~ 311 (407)
-.+.--+..+..|.+| ..+.++.. ++..+. +........ +...+..+ --+..+.++ +.+.+
T Consensus 309 iera~SvtwnpHK~~g-aplqCsa~--l~r~~g----ll~~Cn~~~A~YLFq~dK~YdvS---~DTgdK~iQCGRh~D~F 378 (510)
T KOG0629|consen 309 IERANSVTWNPHKLMG-APLQCSAF--LTREEG----LLQRCNQMSAIYLFQQDKFYDVS---YDTGDKAIQCGRHVDVF 378 (510)
T ss_pred ccccCceeecHHHhhc-CcchhhHH--HHHHHH----HHHhhcccchhhhhccCceeecc---cccccchhhcCccccHH
Confidence 1122245567889888 55777777 455322 222222111 10000111 001111111 11222
Q ss_pred HhH---H----HHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015435 312 KEW---T----LELKAMADRIISMRQQLFDALSARGT 341 (407)
Q Consensus 312 ~~~---~----~~~~~~~~~~~~~~~~l~~~l~~~~~ 341 (407)
..| + ...++..++..++.+|+.+.+++.+.
T Consensus 379 KlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~ 415 (510)
T KOG0629|consen 379 KLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREG 415 (510)
T ss_pred HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhccc
Confidence 111 1 34678889999999999999999864
No 384
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.48 E-value=2.5e-07 Score=84.28 Aligned_cols=160 Identities=16% Similarity=0.198 Sum_probs=35.7
Q ss_pred CceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCC---C---CChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHH
Q 015435 99 NRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPT---W---GNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDL 172 (407)
Q Consensus 99 ~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~---y---~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i 172 (407)
+..++ +++...|+.++ +..+.+|.+|+++.-. + +...++++..|++++.|-.. ....+++.+++|
T Consensus 63 eaA~V--vNnnaAAv~L~---l~~la~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGtt----N~t~~~Dye~AI 133 (367)
T PF03841_consen 63 EAALV--VNNNAAAVLLA---LNTLAKGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTT----NRTHLSDYEKAI 133 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccc--ccccccccccc---ccccccccccccccccccccccccccccccccccccccccccc----cccccccccccc
Confidence 67777 88888888777 3445578888877622 2 23556788899999999653 456789999999
Q ss_pred HcCCCCcEEEEecCCCCCC--CCCCCHHHHHHHHHHHHHcCceeeeccccccccC---CCCCchhHHHHHHHHcCCcEEE
Q 015435 173 RAAPSGAIVLLHACAHNPT--GVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFAS---GSLDADAQSVRMFVADGGECLV 247 (407)
Q Consensus 173 ~~~~~~~~v~i~~~p~NPt--G~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~---~~~~~~~~~~~~~~~~~~~~i~ 247 (407)
+ +++.+++- .+++|-. |..- .-.++++++++++|++++|+|..-..+.. -+.+ +.+.+..+.. ....++
T Consensus 134 ~--e~Ta~ll~-Vh~Sn~~i~GFt~-~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~-~Ep~v~~~~~-~GaDlV 207 (367)
T PF03841_consen 134 T--ENTAALLK-VHTSNFRIQGFTG-EVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLP-DEPTVQEYLA-AGADLV 207 (367)
T ss_dssp -------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT-----------CCC-CT-SEE
T ss_pred c--cccccccc-ccccccccccccc-cccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCc-cccHHHHHhh-cCCCEE
Confidence 8 67777655 4445552 3221 12578888889999999999997522221 0010 1122222222 345688
Q ss_pred EEecCccccccCCCcceeEEeecChhhHHHH
Q 015435 248 AQSYAKNMGLYGERVGALSIVCKTEDVASRV 278 (407)
Q Consensus 248 ~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~ 278 (407)
++|-.|.+| |...|.+ ++.+++.+++
T Consensus 208 ~fSGdKlLG--GPQaGiI---~Gkk~lI~~l 233 (367)
T PF03841_consen 208 TFSGDKLLG--GPQAGII---VGKKELIEKL 233 (367)
T ss_dssp EEETTSSSS--S-S-EEE---EEEHHHHHHH
T ss_pred EEECCCcCC--CCCeEEE---EeCHHHHHHH
Confidence 999999987 5566777 4445544443
No 385
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.46 E-value=9.8e-06 Score=73.19 Aligned_cols=322 Identities=18% Similarity=0.126 Sum_probs=162.5
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhcccc-------ccccCCC-CCCcHHHHHHHHHHHhCCCCCCCCCCceE
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQS-------RVKEYLP-IVGLVDFNKLSAKLILGADSPAIKDNRVT 102 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~y~~-~~g~~~l~~~~a~~~~~~~~~~~~~~~i~ 102 (407)
+...|||.|= . ..|+++++.+...+.+-.+ ..|+--+ ..-+.+.++.+.+++ +... .-+|+
T Consensus 4 ~~~~nFsaGP----a--~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl-~iPd----~Y~Vl 72 (365)
T COG1932 4 PRVYNFSAGP----A--ALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELL-NIPD----DYKVL 72 (365)
T ss_pred CCCCCCCCCc----c--cCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHh-CCCC----CceEE
Confidence 4577888662 1 3477777777776651111 1121111 112455566666666 4321 24677
Q ss_pred EeecCCc-ccHHHHHHHHHHhhcCCCe--EEecCCCCCChHHHHhhcCc--eeeEEEeecCCCC--CcChhhHHHHHHcC
Q 015435 103 TVQCLSG-TGSLRVGAEFLARHYHQLT--IYIPQPTWGNHPKVFTLAGL--SVKTYRYYDPATR--GLNFQGLLEDLRAA 175 (407)
Q Consensus 103 ~~~t~g~-t~a~~~~~~~~~~~~~gd~--Vi~~~p~y~~~~~~~~~~G~--~~~~v~~~~~~~~--~~d~~~l~~~i~~~ 175 (407)
+ ..|| |+...++ .+.++.+... |..-.-+-..+. .++..+. ++...... ..++ -+++++.. +.
T Consensus 73 f--lqGGat~qf~~~--p~nLl~~~~~~yv~~g~Ws~~a~~-eA~~~~~~~~~~~~~~~-~~~~~~iP~~~~~~--~~-- 142 (365)
T COG1932 73 F--LQGGATGQFAMA--PMNLLGKRGTDYVDTGAWSEFAIK-EAKKVGKQPKLIDARIE-EAGYGSIPDLSKWD--FS-- 142 (365)
T ss_pred E--EcCccHHHHHHH--HHhhhcccCceeEeeeehhHhHHH-HHHHhccccccccccee-ccCccCCCChhhcc--cC--
Confidence 7 6655 6666666 3555554332 433322222222 2334442 22222211 1111 22333222 11
Q ss_pred CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccc
Q 015435 176 PSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNM 255 (407)
Q Consensus 176 ~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 255 (407)
.+...+.+ |.-++-+|+-++ +...+ .. +.++|+|....-+... . +-..-.++-.|.-|.+
T Consensus 143 ~~~ayv~~-~~NeTi~Gv~v~--~~p~~---~~--~~~~v~D~SS~ilsr~-i-----------Dvsk~dviyagaQKnl 202 (365)
T COG1932 143 DNDAYVHF-CWNETISGVEVP--ELPDI---GS--DGLLVADASSAILSRP-I-----------DVSKYDVIYAGAQKNL 202 (365)
T ss_pred CCccEEEE-ecCCcccceEcc--CCCCC---CC--CceEEEecccHHhcCC-C-----------ChhHcceEEEehhhcc
Confidence 12222333 222333477554 22222 11 2789999864433321 1 1123456778899999
Q ss_pred cccCCCcceeEEeecChhhHHHHHHH-Hhh--------hhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHH
Q 015435 256 GLYGERVGALSIVCKTEDVASRVESQ-LKL--------VIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRII 326 (407)
Q Consensus 256 ~~~G~r~G~~~~v~~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (407)
|..| ++.+ +.+ +++.++.... +.. ....++.+||+.+.+.....++-. .. +-.++.+.++-+
T Consensus 203 GpaG--ltvv--Ivr-~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wl--k~--~GGl~~~~~rn~ 273 (365)
T COG1932 203 GPAG--LTVV--IVR-PDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWL--KS--QGGLEALEARNQ 273 (365)
T ss_pred Cccc--eEEE--EEc-HHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHH--HH--cCCHHHHHHHHH
Confidence 9887 5555 344 4433333221 111 112333466666666555444311 00 013778888889
Q ss_pred HHHHHHHHHHHhcCCCCCcc-cc--cCCceeEEec-----CCCHHHHHHhHhhccEEEcCC-----C-eEEecC-CCCCC
Q 015435 327 SMRQQLFDALSARGTPGDWS-HI--IKQIGMFTFT-----GLNSEQVAFMTKEYHIYMTSD-----G-RISMAG-LSSKT 391 (407)
Q Consensus 327 ~~~~~l~~~l~~~~~~~~~~-~~--~~~~~~~~~~-----~~~~~~~~~~l~~~gi~~~~g-----g-Ris~~~-~~~e~ 391 (407)
++.+.|.+.+.+.+. +. .. ..+.-+.+.. .++..++.++ +++|+....| | |+++.. ++.|+
T Consensus 274 ~ka~~LY~~id~s~f---y~~~v~~~~RS~mnV~f~~~~~~ld~~fv~ea-e~~gl~~lkGhr~vgGmRasiynA~~~e~ 349 (365)
T COG1932 274 AKAQLLYDWIDKSDF---YRNLVAKANRSRMNVTFTLVDAELDKGFVAEA-EAAGLIYLKGHRSVGGLRASIYNAVPLED 349 (365)
T ss_pred HHHHHHHHHHHhCCc---cccccchhhccceeEEEEcCcHHHHHHHHHHH-HHcCCceeccccCCCceeeeeecCCCHHH
Confidence 999999999998763 21 11 1222222222 2344445555 4466666543 5 999876 78899
Q ss_pred hhHHHHHHHHHHHhh
Q 015435 392 VPHLTDAIHAAVTRM 406 (407)
Q Consensus 392 i~~~~~~l~~~l~~~ 406 (407)
++.+++.++.+.++.
T Consensus 350 veaL~~fm~~f~~~~ 364 (365)
T COG1932 350 VEALTDFMDWFEETY 364 (365)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999988765
No 386
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.46 E-value=1.4e-05 Score=75.28 Aligned_cols=218 Identities=17% Similarity=0.212 Sum_probs=115.2
Q ss_pred cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhc-CCCeEEecCCCCCChHHHHh----hcCceee
Q 015435 77 LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY-HQLTIYIPQPTWGNHPKVFT----LAGLSVK 151 (407)
Q Consensus 77 ~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~-~gd~Vi~~~p~y~~~~~~~~----~~G~~~~ 151 (407)
+.++...++++. +.+ .-|.-+ -.++|.+-+++....+..+ ++++|+++...++.+...++ ..|++++
T Consensus 112 lfe~Qs~i~eLT-Gmd-----vaNaSl--yd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv 183 (429)
T PF02347_consen 112 LFEYQSMICELT-GMD-----VANASL--YDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIV 183 (429)
T ss_dssp HHHHHHHHHHHH-TSS-----EE-SEB--SSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEE
T ss_pred HHHHHHHHHHhh-CCC-----ccCCCC--CChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEE
Confidence 556677778776 542 134556 7788888887742233222 23599999999998888555 5799999
Q ss_pred EEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCch
Q 015435 152 TYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDAD 231 (407)
Q Consensus 152 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~ 231 (407)
.++.. + +...| . +++..+++ .+|+ -.|. .+++++|+++++++|.++|+ .+. ........
T Consensus 184 ~~~~~-~-~~~~d--------~--~~~a~v~v-q~Pn-~~G~---~ed~~~i~~~~h~~gal~~~-~ad-~~aL~~l~-- 242 (429)
T PF02347_consen 184 EVPLD-E-DGTTD--------D--DDTAAVMV-QNPN-TFGV---FEDIKEIADIAHAAGALVIV-GAD-PNALGGLK-- 242 (429)
T ss_dssp EE-BB-T-TCSB---------S--TTEEEEEE-ESS--TTSB-----THHHHHHHHHHTT-EEEE-CGG-CCGCCTC---
T ss_pred Eeccc-c-cCCcc--------c--cCeEEEEe-ecCC-CCce---EeeHHHHHHHHHHcCCEEEE-ecC-HHHHhCcC--
Confidence 99883 2 23333 2 56777777 5554 3566 55699999999999988887 432 12222111
Q ss_pred hHHHHHHHHcCCcEEEEEecCccccc----cCCCcceeEEeecChhhHHHHHHHH---------------------hhhh
Q 015435 232 AQSVRMFVADGGECLVAQSYAKNMGL----YGERVGALSIVCKTEDVASRVESQL---------------------KLVI 286 (407)
Q Consensus 232 ~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~v~~~~~~~~~~~~~~---------------------~~~~ 286 (407)
+ +....-.|++++ +|.||. .|-..|++ .+. +++...+-.++ .++.
T Consensus 243 --~----Pge~GADI~vg~-~Q~fg~p~~~GGP~~G~~--a~~-~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIr 312 (429)
T PF02347_consen 243 --S----PGEYGADIVVGE-HQTFGIPMGFGGPGAGFF--AVR-EDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIR 312 (429)
T ss_dssp -------GGGGT-SEEEEC-CTTTT---CCC-S--EEE--EE--GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHH
T ss_pred --C----hhhcCccEEeeC-CCCCcccCCCCCCCeeeE--EEh-hhhhhhCCCceecccccccccceeeecccccccccc
Confidence 1 111223455665 777753 34556776 344 22222211110 0111
Q ss_pred h---cccCCCChhHHH-HHHHHhc-ChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015435 287 R---PMYSSPPIHGAS-IVATILK-DSTMYKEWTLELKAMADRIISMRQQLFDALSAR 339 (407)
Q Consensus 287 ~---~~~~~~~~~~~~-~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 339 (407)
+ ....+++...+. ++..++. .+ .+.++++.++...+..|+.+.|.+.
T Consensus 313 ReKAtSNIctnqaL~A~~a~~Yl~~~G------~~GL~~iA~~~~~~A~yl~~~L~~~ 364 (429)
T PF02347_consen 313 REKATSNICTNQALLALAAAIYLAYLG------PEGLREIAERIHLNAHYLAERLKKI 364 (429)
T ss_dssp GCCSTT---SS-HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred ccchhhhhhhhHHHHHHHHHHHHHHhC------HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 111233332222 1222221 12 2568888999999999999999886
No 387
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.43 E-value=0.00051 Score=63.49 Aligned_cols=294 Identities=17% Similarity=0.218 Sum_probs=160.8
Q ss_pred cccccccCCCCC-----C----cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcC--CCeEEec
Q 015435 64 DQSRVKEYLPIV-----G----LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH--QLTIYIP 132 (407)
Q Consensus 64 ~~~~~~~y~~~~-----g----~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~--gd~Vi~~ 132 (407)
++.....|+|-+ | +.++...++++. +.. -.|..+ -.++|.+=+++. +.....+ ..+++++
T Consensus 100 ~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLT-Gm~-----VANASm--~DeaTAaAEAm~-ma~r~~k~k~~~~~V~ 170 (450)
T COG0403 100 NPEWYTAYTPYQPEISQGRLEALFEFQTLVADLT-GLD-----VANASM--LDEATAAAEAML-MAKRVTKKKRNKFLVP 170 (450)
T ss_pred CccccccCCCCchhhhhHHHHHHHHHHHHHHHHh-CCC-----cccchh--hhhHHHHHHHHH-HHHHhhcCcCceEEec
Confidence 455666777732 3 455666677766 532 256777 788888888875 3333443 5789999
Q ss_pred CCCCCChHHHHh----hcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHH
Q 015435 133 QPTWGNHPKVFT----LAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMR 208 (407)
Q Consensus 133 ~p~y~~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~ 208 (407)
.-.|+.+.+.++ ..|.+++.++.+ |.+++++. . ...+..+++ -.|+ -.| ....++++|.+.++
T Consensus 171 ~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~-~-~~~~~gv~v-QyP~-~~G--~~~~d~~~l~~~~h 237 (450)
T COG0403 171 KDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESA-D-DGDVFGVLV-QYPN-TFG--IVEEDLRALIEAAH 237 (450)
T ss_pred CCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhc-c-ccCeEEEEE-ecCC-CCC--ccchhHHHHHHHHh
Confidence 999999999887 446777777552 66777776 3 235567777 3333 235 23668999999999
Q ss_pred HcCceeeeccccccccCCCCCchhHHHHHH--HHcCCcEEEEEecCcc---ccccCCCcceeEEeecChhhHH-------
Q 015435 209 SKGLLPFFDSAYQGFASGSLDADAQSVRMF--VADGGECLVAQSYAKN---MGLYGERVGALSIVCKTEDVAS------- 276 (407)
Q Consensus 209 ~~~~~li~D~~y~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~s~sK~---~~~~G~r~G~~~~v~~~~~~~~------- 276 (407)
++|.++++=.= ..++..+ +......|++++..-. +|..|-.+|+. .+. +++..
T Consensus 238 ~~~al~~v~aD------------plaL~LL~pPGe~GADIvvG~~QrfGvPmgfGGPhag~f--A~~-~~~~R~mPGRlV 302 (450)
T COG0403 238 SAGALVIVAAD------------PLALGLLKPPGEFGADIVVGSAQRFGVPMGFGGPHAGYF--AVK-DEFKRQMPGRLV 302 (450)
T ss_pred hcCCEEEEEec------------hhHhhccCCccccCCceEEecCcccCCCcCCCCcceeee--eEh-HhHhhcCCCcee
Confidence 99977765221 1111111 1223445666654332 34456667776 344 22111
Q ss_pred --------------HHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhH--HHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015435 277 --------------RVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEW--TLELKAMADRIISMRQQLFDALSARG 340 (407)
Q Consensus 277 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~ 340 (407)
.+..+-.++.+-. -++++....++.+.+.. ++.-| .+.+.++..+..++..++.+.|++.+
T Consensus 303 G~S~D~~G~~A~rLaLQTREQHIRReK-ATSNICTnQaLlA~~As--~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~ 379 (450)
T COG0403 303 GVSVDAAGKRAFRLALQTREQHIRREK-ATSNICTNQALLALAAS--MYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIG 379 (450)
T ss_pred eeeecCCCCchhhhhHHHHHHHHhhhc-cchhhhHHHHHHHHHHH--HHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 1122222222211 12233222222222221 11111 15688889999999999999999654
Q ss_pred CCCCcccccCCceeEEe--cCCCHHHHHHh---HhhccEEEcCCC--eEEec--C-CCCCChhHHHHHHHH
Q 015435 341 TPGDWSHIIKQIGMFTF--TGLNSEQVAFM---TKEYHIYMTSDG--RISMA--G-LSSKTVPHLTDAIHA 401 (407)
Q Consensus 341 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---l~~~gi~~~~gg--Ris~~--~-~~~e~i~~~~~~l~~ 401 (407)
.. ++.... .+|-- +.+..+....+ ....|+-+..-. ++.++ . .++++++.+++.+..
T Consensus 380 ~g--~~~~~~--~fFdt~~v~~~~~~~~~l~~~~~~~G~~L~~~~~~~~~ia~tEt~t~~~i~~l~~~~~~ 446 (450)
T COG0403 380 AG--VELVFD--HFFDTFTVRVPEEVAEALLAAAIAGGINLRRVDADTVLIALTETTTKEDIDALVAAFGG 446 (450)
T ss_pred Cc--eEeccc--cceeeEEEecchhHHHHHHHHHHhcCCceeeecCCceEEEeecccCHHHHHHHHHHHhh
Confidence 10 343322 34432 24442333333 333566665532 55444 2 244666666666654
No 388
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.34 E-value=4.5e-05 Score=70.69 Aligned_cols=93 Identities=17% Similarity=0.213 Sum_probs=72.8
Q ss_pred EEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC---CCCcEEEEecCCCCCCCCCCCHHHHHHHHH
Q 015435 129 IYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA---PSGAIVLLHACAHNPTGVDPTLEQWEQIRQ 205 (407)
Q Consensus 129 Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~---~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~ 205 (407)
+..++-++.+..++....|++.+.++. +.++++..+.|++++.+. .-.+.+++. +. .|..+-+-+++.+|..
T Consensus 185 ~Y~SDqahssveka~~i~~VklR~l~t--d~n~~mr~~~L~~AIe~D~arGlIPf~v~a-t~--GTT~~ca~D~l~elg~ 259 (511)
T KOG0628|consen 185 AYCSDQAHSSVEKACLIAGVKLRALPT--DENFGMRGDTLRKAIEEDIARGLIPFFVCA-TL--GTTSSCAFDELEELGP 259 (511)
T ss_pred EEecCcccchHHHhHhhcceeEEEeec--ccCcCCCHHHHHHHHHHHHhCCCccEEEEE-ee--cCccccccccHHHhcc
Confidence 445668899999999999999999998 348999999999999754 234666662 32 2333334679999999
Q ss_pred HHHHcCceeeeccccccccCC
Q 015435 206 LMRSKGLLPFFDSAYQGFASG 226 (407)
Q Consensus 206 ~~~~~~~~li~D~~y~~~~~~ 226 (407)
+|+++|+||.+|.+|++-.+.
T Consensus 260 Vc~~~glWLHVDAAYAGsa~i 280 (511)
T KOG0628|consen 260 VCREEGLWLHVDAAYAGSAFI 280 (511)
T ss_pred hhhhcCEEEEeehhhcccccc
Confidence 999999999999999876653
No 389
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.26 E-value=2.4e-05 Score=69.96 Aligned_cols=215 Identities=8% Similarity=0.176 Sum_probs=115.5
Q ss_pred hhhHHHHHHcC--CCCcEEEEecCCCCCC-CC-CCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHH
Q 015435 165 FQGLLEDLRAA--PSGAIVLLHACAHNPT-GV-DPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVA 240 (407)
Q Consensus 165 ~~~l~~~i~~~--~~~~~v~i~~~p~NPt-G~-~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~ 240 (407)
++++++.|.+. .+.+++-++.-|-..- |- --|++.+++|.++|+|||+.+|+||+..+.+..| +.|....+.-
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTG---k~WaHehw~l 331 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATG---KFWAHEHWNL 331 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccC---ceeeehhcCC
Confidence 56666666432 1223322223443333 32 4789999999999999999999999988777665 5666666532
Q ss_pred cCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHH
Q 015435 241 DGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKA 320 (407)
Q Consensus 241 ~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 320 (407)
.....++ +|||.|-..| +. -+++++.. ...+.+ ..|..-|.. ...+..+++... -+.
T Consensus 332 ~~PpD~v--TFSKK~q~gG----ff----h~~~frpn--~pYrif-NTWmGdP~k--~lll~~vv~~I~--------~~~ 388 (484)
T KOG1405|consen 332 DSPPDVV--TFSKKFQTGG----FF----HDEEFRPN--EPYRIF-NTWMGDPSK--NLLLEEVVQEIK--------RED 388 (484)
T ss_pred CCCccce--ehhhhhhcCc----cc----cCcccCCC--chHHHh-hhhcCChHH--HHHHHHHHHHHh--------HHH
Confidence 2222232 4899987544 43 22222111 011111 122222222 222222222111 122
Q ss_pred HHHHHHHHHHHHHHHHHhc--CCCCCcccccCCceeEEecCCC---HHHHHHhHhhccEEEcCCC----eEEecC-CCCC
Q 015435 321 MADRIISMRQQLFDALSAR--GTPGDWSHIIKQIGMFTFTGLN---SEQVAFMTKEYHIYMTSDG----RISMAG-LSSK 390 (407)
Q Consensus 321 ~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gi~~~~gg----Ris~~~-~~~e 390 (407)
+.......-++|...|.++ .+|..+.-....|.|..|---+ .+.+...++-.|+.+..+| |+..+- ..+.
T Consensus 389 Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps~~~Rdk~i~~~~~nGv~~GGCg~~siRfRPsLvf~~~ 468 (484)
T KOG1405|consen 389 LLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPSGSIRDKLILIARLNGVNLGGCGDKSIRFRPSLVFRKH 468 (484)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCCChHHHHHHHHHHHHcCceecccccceeeeccceeehhh
Confidence 3334445556666666654 2333355555566655553222 2344455566899988887 664332 2556
Q ss_pred ChhHHHHHHHHHHHh
Q 015435 391 TVPHLTDAIHAAVTR 405 (407)
Q Consensus 391 ~i~~~~~~l~~~l~~ 405 (407)
-.+.+++++.+++..
T Consensus 469 Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 469 HADIFLDIFDKILAG 483 (484)
T ss_pred hHHHHHHHHHHHhcc
Confidence 678888888887764
No 390
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.95 E-value=0.002 Score=66.56 Aligned_cols=283 Identities=17% Similarity=0.219 Sum_probs=148.4
Q ss_pred cccccccCCCCC-----C----cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcC--CCeEEec
Q 015435 64 DQSRVKEYLPIV-----G----LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH--QLTIYIP 132 (407)
Q Consensus 64 ~~~~~~~y~~~~-----g----~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~--gd~Vi~~ 132 (407)
++.....|+|-+ | +.++...++++. +.. -.|..+ -.++|.+-+++.. .....+ ..+|+++
T Consensus 104 ~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~Lt-Gm~-----vaNASl--~D~atA~aEA~~m-a~~~~~~k~~~~~v~ 174 (954)
T PRK12566 104 NPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLT-GLD-----LANASL--LDEATAAAEAMAL-AKRVAKSKSNRFFVD 174 (954)
T ss_pred CchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHh-Cch-----hhhhhh--ccchhHHHHHHHH-HHHHhhcCCCEEEEC
Confidence 344455666633 3 556677777766 542 135556 6677777776532 222222 4689999
Q ss_pred CCCCCChHHHHh----hcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHH
Q 015435 133 QPTWGNHPKVFT----LAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMR 208 (407)
Q Consensus 133 ~p~y~~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~ 208 (407)
+-.++.+...++ ..|++++. +++++.+. .+...+++ -+|+ -.|.+ +++++|.++++
T Consensus 175 ~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~--~~~~~v~v-q~P~-~~G~i---~d~~~i~~~~h 234 (954)
T PRK12566 175 EHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAA--HAVFGALL-QYPD-THGEI---RDLRPLIDQLH 234 (954)
T ss_pred CCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCC--CCEEEEEE-ECCC-CceEE---ccHHHHHHHHH
Confidence 999998888766 44555543 23333333 34566666 3443 35774 67999999999
Q ss_pred HcCceeeeccccccccCCCCCchhHHHHHH--HHcCCcEEEEE---ecCccccccCCCcceeEEeecChhhHHHH-----
Q 015435 209 SKGLLPFFDSAYQGFASGSLDADAQSVRMF--VADGGECLVAQ---SYAKNMGLYGERVGALSIVCKTEDVASRV----- 278 (407)
Q Consensus 209 ~~~~~li~D~~y~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~---s~sK~~~~~G~r~G~~~~v~~~~~~~~~~----- 278 (407)
++|.++| +.+. ..++..+ +......|+++ +|+=-+|..|-..|++ .+. +++...+
T Consensus 235 ~~gal~~-~~~d-----------~laL~ll~~Pge~GADI~vG~~Q~fGvp~~~GGP~ag~~--a~~-~~~~R~~PGRiv 299 (954)
T PRK12566 235 GQQALAC-VAAD-----------LLSLLVLTPPGELGADVVLGSTQRFGVPMGYGGPHAAYF--ACR-DDYKRAMPGRII 299 (954)
T ss_pred HcCCEEE-EEeC-----------HHHHhCCCChhhcCCcEEeeCCCcCCCCCCCCCCCeeee--eeh-HHHHhhCCCCcc
Confidence 9998766 3331 1111111 12223345555 2333344456666777 344 2222211
Q ss_pred ----------------HHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhH--HHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015435 279 ----------------ESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEW--TLELKAMADRIISMRQQLFDALSARG 340 (407)
Q Consensus 279 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~ 340 (407)
..+-.++.+-. -+++.....++.+.+. .++.-| .+.++++.++...+..++.+.|.+.|
T Consensus 300 G~s~D~~G~~a~~l~LqtREQHIRReK-AtSNICT~qaL~A~~a--~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g 376 (954)
T PRK12566 300 GVSRDARGNTALRMALQTREQHIRREK-ANSNICTAQVLLANIA--GFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKG 376 (954)
T ss_pred ceeecCCCCeeeehhhhHHHHHhhhcc-ccchhhHHHHHHHHHH--HHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 11111111111 1222222222222221 111111 14577888889999999999999977
Q ss_pred CCCCcccccCCceeEEec--CC--CHHHHHHhHhhccEEEcCC--CeE--EecC-CCCCChhHHHHHH
Q 015435 341 TPGDWSHIIKQIGMFTFT--GL--NSEQVAFMTKEYHIYMTSD--GRI--SMAG-LSSKTVPHLTDAI 399 (407)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~l~~~gi~~~~g--gRi--s~~~-~~~e~i~~~~~~l 399 (407)
++.... .+|--+ .+ ..+.+.....+.||.++-- +++ |+.. .+.+|+..++..+
T Consensus 377 ----~~~~~~--~fF~~~~v~~~~~~~~~~~~a~~~~~n~r~~~~~~~~~s~de~~~~~~~~~~~~~f 438 (954)
T PRK12566 377 ----IKRLNR--HFFDTLTLEVGGAQAAIIESAEAARINLRILGRGRLGVSLDETCDEATVARLFDIF 438 (954)
T ss_pred ----CccccC--CccceEEEEccCCHHHHHHHHHHCCCeeEEeCCCeEEEEeCCCCCHHHHHHHHHHh
Confidence 443222 344321 22 3444555555577776553 344 4443 3457777777666
No 391
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.70 E-value=0.01 Score=57.75 Aligned_cols=143 Identities=17% Similarity=0.206 Sum_probs=97.4
Q ss_pred ccccCCC---CCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhh--cCCC---e-EEecCCCCC
Q 015435 67 RVKEYLP---IVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARH--YHQL---T-IYIPQPTWG 137 (407)
Q Consensus 67 ~~~~y~~---~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~--~~gd---~-Vi~~~p~y~ 137 (407)
.+|.|.| .+|+.++-+.+.+++...-+. +.+.+ |-++|.++-+.-+...+.. .+|+ . -++|...+.
T Consensus 567 nIHPF~P~eQaqGY~~lf~~Le~~Lc~iTG~----D~~s~-QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHG 641 (1001)
T KOG2040|consen 567 NIHPFAPVEQAQGYQQLFTELEKDLCEITGF----DSFSL-QPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHG 641 (1001)
T ss_pred cCCCCCchHHHhhHHHHHHHHHHHhheeecc----cceee-cCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccC
Confidence 4666766 457777777777777333221 44444 4666665554443233332 2443 2 366777888
Q ss_pred ChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCC-CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeee
Q 015435 138 NHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPS-GAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFF 216 (407)
Q Consensus 138 ~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~-~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 216 (407)
.....+.++|.++++|.+ ..++.+|..+|+++.+++.. -.+++| ..|+. -|+. .+.+++++++.++||--+..
T Consensus 642 TNPASA~MagmkvvpV~~--~~~G~id~~dLk~kaekh~~~Laa~Mv-TYPST-~Gvf--E~~i~d~cd~iHehGGQVYl 715 (1001)
T KOG2040|consen 642 TNPASAAMAGMKVVPVGC--DANGNIDMVDLKAKAEKHKDNLAALMV-TYPST-HGVF--EEGIDDICDIIHEHGGQVYL 715 (1001)
T ss_pred CChhhHHhcCCEEEEeec--cCCCCccHHHHHHHHHHhhhhhheeEE-ecccc-cccc--cccHHHHHHHHHhcCCEEEe
Confidence 888888999999999998 55688999999998876543 355555 44431 2443 66899999999999999999
Q ss_pred cccc
Q 015435 217 DSAY 220 (407)
Q Consensus 217 D~~y 220 (407)
|.+-
T Consensus 716 DGAN 719 (1001)
T KOG2040|consen 716 DGAN 719 (1001)
T ss_pred cCCC
Confidence 9984
No 392
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.25 E-value=0.014 Score=50.65 Aligned_cols=197 Identities=13% Similarity=0.086 Sum_probs=108.3
Q ss_pred CeEEecCCCCCChHHHHhhcCceeeEEEe-ecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHH
Q 015435 127 LTIYIPQPTWGNHPKVFTLAGLSVKTYRY-YDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQ 205 (407)
Q Consensus 127 d~Vi~~~p~y~~~~~~~~~~G~~~~~v~~-~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~ 205 (407)
.-|+-+.-.-.+-...+-.+|..++.+.- .+.+..-.|++.+++.+.+-....+++++++ ...=.--+++.+++|+.
T Consensus 104 kyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~st--tscfapr~pd~leaiaa 181 (432)
T KOG3843|consen 104 KYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIHST--TSCFAPRSPDNLEAIAA 181 (432)
T ss_pred cEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEeec--ccccCCCCCchHHHHHH
Confidence 34554433222333445577887776643 2222234588999998886545556666321 11112245789999999
Q ss_pred HHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeEEeecChhhHHHHHHHHhhh
Q 015435 206 LMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLV 285 (407)
Q Consensus 206 ~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~ 285 (407)
+|..|++.-|+..+|.--... -.+-+......++-..++-|+-|.|..| +|..+ ++. +.+.++..+...
T Consensus 182 ica~~diphivnnayglqsee----~i~~iaa~~~~grida~vqsldknf~vp---vggai-ia~---fk~n~iq~iak~ 250 (432)
T KOG3843|consen 182 ICAAHDIPHIVNNAYGLQSEE----CIHKIAAAAECGRIDAFVQSLDKNFMVP---VGGAI-IAA---FKDNFIQEIAKM 250 (432)
T ss_pred HHHccCchhhhccccccchHH----HHHHHHHHhhhccHHHHHHHhhhcceee---cchhH-hhH---hHHHHHHHHHHh
Confidence 999999999999998532211 2233333334445556778999999755 44432 222 223333333332
Q ss_pred hhcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015435 286 IRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARG 340 (407)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 340 (407)
-..-.+..|.....+.+..+... .|.+-+.++++.+.+++..+.+.-+..|
T Consensus 251 ypgrasa~ps~dllitll~~gqn----~f~e~~~eqkemf~~l~~ki~~~ae~~~ 301 (432)
T KOG3843|consen 251 YPGRASASPSLDLLITLLSLGQN----AFKELFGEQKEMFLKLRNKIIKFAEAIG 301 (432)
T ss_pred CCCccccCccHHHHHHHHHhchh----HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 22222344555555554443332 2444455666666666666666555554
No 393
>PLN02672 methionine S-methyltransferase
Probab=96.32 E-value=0.091 Score=55.92 Aligned_cols=200 Identities=14% Similarity=0.112 Sum_probs=122.5
Q ss_pred hhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHh----hcCCC
Q 015435 52 NVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLAR----HYHQL 127 (407)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~----~~~gd 127 (407)
+.+......+. ......|.|+.|...+|..++.++...+..+++++||++ .++-..|++.++++.+- ++.+.
T Consensus 405 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1082)
T PLN02672 405 PFLAYLASALK--GLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVV--FPSRAVAIENALRLFSPRLAIVDEHL 480 (1082)
T ss_pred cHHHHHHHHHc--cCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEE--eccHHHHHHHHHHhhChHHHhhhhhh
Confidence 33444445554 445677889999999999999999666788899999999 99999999998544321 22222
Q ss_pred eEEecCCCCCChHHHHhhcC--------ceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHH
Q 015435 128 TIYIPQPTWGNHPKVFTLAG--------LSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQ 199 (407)
Q Consensus 128 ~Vi~~~p~y~~~~~~~~~~G--------~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~ 199 (407)
+-.++. .|...+...| -.+..+.- +. .-+.+.+.++ .-++-++++.-.+ +-..+...
T Consensus 481 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~ 545 (1082)
T PLN02672 481 TRWLPK----KWLTSLAIENATSDSKSDDVITVIEA--PR----QSDLVIELIK--KLKPQVVVTGMAD---FEMRTSTA 545 (1082)
T ss_pred hccCCH----HHHhHhhhhcccccCccCCeEEEEeC--CC----cchHHHHHHH--hCCCeEEEEeccc---hhhhhHHH
Confidence 211111 1222222222 22222211 11 1234555555 2344555533322 44455778
Q ss_pred HHHHHHHHHHcCceeeeccc-cccccCCCCCchhHHHHHHHH---cCCcEEEEEecCccccccCCCcceeEEeecChhhH
Q 015435 200 WEQIRQLMRSKGLLPFFDSA-YQGFASGSLDADAQSVRMFVA---DGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVA 275 (407)
Q Consensus 200 l~~i~~~~~~~~~~li~D~~-y~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~s~sK~~~~~G~r~G~~~~v~~~~~~~ 275 (407)
++.|.+.+++.|.+|+.|.. |..+...+ ...++..+.. ...+..++.++-|+--.+.+.+.++ +.-++.+.
T Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 620 (1082)
T PLN02672 546 FEHLLNVTAEIGARLFLDISDHLELSSLP---GSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFV--ISENEAVL 620 (1082)
T ss_pred HHHHHHHHHhhCcEEEEehhhheeeccCC---CcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEE--ecCcHHHH
Confidence 99999999999999999986 44444332 3334444432 2356777888888876688999998 45554433
No 394
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=96.25 E-value=0.19 Score=44.42 Aligned_cols=322 Identities=16% Similarity=0.149 Sum_probs=162.0
Q ss_pred CCCeeeeeeeeeecCCCccccchhHHHHHHHHhcccc-------ccccCCCCCC-cHHHHHHHHHHHhCCCCCCCCCCce
Q 015435 30 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQS-------RVKEYLPIVG-LVDFNKLSAKLILGADSPAIKDNRV 101 (407)
Q Consensus 30 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~y~~~~g-~~~l~~~~a~~~~~~~~~~~~~~~i 101 (407)
.++++||+.|-. ..|++++.++...+.+-.+ ..|+-....+ +.+....+.+++ +... .-.|
T Consensus 5 ~~~vvnFaaGPA------klp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLl-niPd----n~~v 73 (370)
T KOG2790|consen 5 PERVVNFAAGPA------KLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELL-NIPD----NYKV 73 (370)
T ss_pred ccceeecCCCcc------cCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHH-cCCC----ceeE
Confidence 468999997731 4588888888887762110 1111111111 344445556655 4321 2367
Q ss_pred EEeecCCcccHHHHHHHHHHhhcCC---CeEEecCCCCCChHHHHhhcCceeeEEEeecCCCC--CcChhhHHHHHHcCC
Q 015435 102 TTVQCLSGTGSLRVGAEFLARHYHQ---LTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATR--GLNFQGLLEDLRAAP 176 (407)
Q Consensus 102 ~~~~t~g~t~a~~~~~~~~~~~~~g---d~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~--~~d~~~l~~~i~~~~ 176 (407)
+++|..|+++ ..++..-+..+..| |-|+.-..+-..+..+-+..-.+.+..+.. +..+ -+|.+..+. .+
T Consensus 74 lf~QGGGt~q-FaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k-~y~ygkvPd~~~w~~----~~ 147 (370)
T KOG2790|consen 74 LFLQGGGTGQ-FAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLK-SYTYGKVPDPSTWEL----NP 147 (370)
T ss_pred EEEeCCCccc-ccccchhhhccccCCccceEEeccccHHHHHHHHhhCCceEEecccc-ccccCcCCChhhccc----CC
Confidence 7765555444 44432112123445 445555444334444433333334444442 2232 234333332 24
Q ss_pred CCcEEEEecCCCCCC--CCCCCHHHHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCcc
Q 015435 177 SGAIVLLHACAHNPT--GVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKN 254 (407)
Q Consensus 177 ~~~~v~i~~~p~NPt--G~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 254 (407)
+...+++ |.|.| |+-++.-. +-.-+|..++.|-. +.|...+. +.....++..+.-|.
T Consensus 148 da~yvyy---CaNETVHGVEf~~~P------~~~~~~~vlVaDmS-SnflSrpv-----------Dvsk~gvi~aGAQKN 206 (370)
T KOG2790|consen 148 DASYVYY---CANETVHGVEFDFIP------VNDPKGAVLVADMS-SNFLSRPV-----------DVSKFGVIFAGAQKN 206 (370)
T ss_pred CccEEEE---ecCceeeceecCCCC------CCCCCCceEEEecc-cchhcCCc-----------cchhcceEEeccccc
Confidence 4555555 35666 77544211 22446889999984 55654422 223346677788999
Q ss_pred ccccCCCcceeEEeecChhhHHHHHHHHhhhh------------hcccCCCChhHHHHHHHHhcChhhHHhHHHHHHHHH
Q 015435 255 MGLYGERVGALSIVCKTEDVASRVESQLKLVI------------RPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMA 322 (407)
Q Consensus 255 ~~~~G~r~G~~~~v~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 322 (407)
+|..|+- .+ +.+ +.+........ ...+.++|..+.++.-..++... + +-.+..+.
T Consensus 207 ~G~aG~T--vv--ivr-----~dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il--~--~GGl~a~e 273 (370)
T KOG2790|consen 207 VGPAGVT--VV--IVR-----KDLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWIL--E--KGGLAAME 273 (370)
T ss_pred cCccccE--EE--EEe-----hhhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHH--h--cccHHHHH
Confidence 9988753 11 244 22222111110 12223555555554433333110 0 01255666
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCccc--ccCC--cee---EEec--CCCHHHHHHhHhhccEEEcC-----CC-eEEecC-
Q 015435 323 DRIISMRQQLFDALSARGTPGDWSH--IIKQ--IGM---FTFT--GLNSEQVAFMTKEYHIYMTS-----DG-RISMAG- 386 (407)
Q Consensus 323 ~~~~~~~~~l~~~l~~~~~~~~~~~--~~~~--~~~---~~~~--~~~~~~~~~~l~~~gi~~~~-----gg-Ris~~~- 386 (407)
+.-.+..+++.+.+.+... +-. ..|. .-+ |..- .+..+++....++ ++.-.. || |-|+..
T Consensus 274 ~~n~~KskllYd~iD~s~g---fy~cpVe~~~RS~MNV~Fri~~d~Le~eFLkeA~~~-~mv~LKGhRSVGGiRASlYNA 349 (370)
T KOG2790|consen 274 KLNQEKSKLLYDAIDNSNG---FYRCPVEPSVRSRMNVPFRIEKDELEAEFLKEAAKE-HMVQLKGHRSVGGIRASLYNA 349 (370)
T ss_pred HHHHHHHHHHHHHHHhcCC---eEEcccchhhhhhcccceeecchHHHHHHHHHHHHh-hhhccccccccccchhhhhcc
Confidence 7777888999999987621 221 1121 111 1111 2345566666554 333333 34 888765
Q ss_pred CCCCChhHHHHHHHHHHHhh
Q 015435 387 LSSKTVPHLTDAIHAAVTRM 406 (407)
Q Consensus 387 ~~~e~i~~~~~~l~~~l~~~ 406 (407)
++-++++.+++.++++.+..
T Consensus 350 isv~~~q~L~~~m~~F~k~h 369 (370)
T KOG2790|consen 350 ISVEEVQKLAAFMKEFQKKH 369 (370)
T ss_pred ccHHHHHHHHHHHHHHHHhc
Confidence 67799999999999887653
No 395
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=95.72 E-value=0.67 Score=41.49 Aligned_cols=132 Identities=19% Similarity=0.139 Sum_probs=87.1
Q ss_pred CcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCC---eEEecCCCCCChH----HHHhhcCc
Q 015435 76 GLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQL---TIYIPQPTWGNHP----KVFTLAGL 148 (407)
Q Consensus 76 g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd---~Vi~~~p~y~~~~----~~~~~~G~ 148 (407)
+.+..-..++... +. .+++|.+ .++-|--+..+ +.+...|-. +|+...-+|++-. ..++..|.
T Consensus 112 ~De~il~l~~~iV-GA-----~e~Evav--mNsLTvNlh~L--l~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~ 181 (465)
T KOG3846|consen 112 IDEPILPLLAPIV-GA-----QENEVAV--MNSLTVNLHSL--LISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGI 181 (465)
T ss_pred cchhhhhhhhhhc-cC-----Cchhhhh--HhhhhhHHHHH--HHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCC
Confidence 3445556666666 32 2478988 88888888877 455566543 5787776666543 44456677
Q ss_pred eeeEE--EeecCC--CCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccc
Q 015435 149 SVKTY--RYYDPA--TRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQ 221 (407)
Q Consensus 149 ~~~~v--~~~~~~--~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~ 221 (407)
.+... .+ .+. ...+-.+++.+.|+......++++.+-.+.-||..++ +.+|-..-+..|+++=.|-+++
T Consensus 182 ~~e~sm~~i-ePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHA 254 (465)
T KOG3846|consen 182 SPENSMIQI-EPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHA 254 (465)
T ss_pred ChHHheEEe-cccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccc---hhhhhhcccCCCcEechhhhhh
Confidence 65432 22 122 2346678899988865545555555888999999875 7777755666799999998864
No 396
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=89.08 E-value=27 Score=35.17 Aligned_cols=296 Identities=17% Similarity=0.214 Sum_probs=141.6
Q ss_pred HHHHhccccccccCCCCC-----C----cHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCCe
Q 015435 58 EQLLVNDQSRVKEYLPIV-----G----LVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLT 128 (407)
Q Consensus 58 ~~~~~~~~~~~~~y~~~~-----g----~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~ 128 (407)
.+.+.+++....+|+|-+ | +..+...+++.- + ++-.|..+ ..-||.|-+++. +.....++.+
T Consensus 137 ~RNilenp~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlT-G-----L~~aNASL--LDEgTAaaEAm~-l~~~~~krkk 207 (1001)
T KOG2040|consen 137 LRNILENPGWYTQYTPYQAEISQGRLESLLNYQTMITDLT-G-----LPMANASL--LDEGTAAAEAMA-LCNRINKRKK 207 (1001)
T ss_pred HHHhhhCCcceeccCCCchhhhhhhHHHHhhhHHhhhhcc-C-----Ccccchhh--hccchhHHHHHH-HHHhhcccce
Confidence 344443566777887733 2 112233333333 3 22356666 677888888774 3334557778
Q ss_pred EEecCCCCCChHHHHh----hcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHH
Q 015435 129 IYIPQPTWGNHPKVFT----LAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIR 204 (407)
Q Consensus 129 Vi~~~p~y~~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~ 204 (407)
.++...+|+.....++ .+|++++.. |+++... .......+++ -.|. --|.+. +..+++
T Consensus 208 ~vvd~~~hpqtlsV~~TRa~~~~i~v~~~----------~~~~~~~---s~~~v~gvlv-QYP~-t~G~i~---d~~el~ 269 (1001)
T KOG2040|consen 208 FVVDSNCHPQTLSVVKTRAKGFGIKVVVS----------DIKEADY---SSKDVSGVLV-QYPD-TEGSVL---DFDELV 269 (1001)
T ss_pred EEecCCCCcchhhhhhccccccceeEEec----------CHHHhhc---cccceeEEEE-EcCC-CCCccc---CHHHHH
Confidence 8888899998888776 223332221 2222221 1123344555 2222 235544 577777
Q ss_pred HHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCcccccc----CCCcceeE--------------
Q 015435 205 QLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLY----GERVGALS-------------- 266 (407)
Q Consensus 205 ~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~-------------- 266 (407)
+.+++.|.++++-.--..+..- .-+......|.++| |.-||.| |-..|+..
T Consensus 270 ~~a~~~~s~vv~atDLLaLtiL----------rpPgefGaDIavGS-sQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRii 338 (1001)
T KOG2040|consen 270 ELAHANGSLVVMATDLLALTIL----------RPPGEFGADIAVGS-SQRFGVPLGYGGPHAAFFAVSESLVRMMPGRII 338 (1001)
T ss_pred HHhhccCceEEEeehhhHHHcc----------CChhhcCceeeecc-ccccCccccCCCchHHHHHHHHHHHhhCCCceE
Confidence 7799998776643211111110 00122344566666 3333322 21112210
Q ss_pred EeecC----hhhHHHHHHHHhhhhhcccCCCChhHHHHHHHHhcChhhHHhHH--HHHHHHHHHHHHHHHHHHHHHHhcC
Q 015435 267 IVCKT----EDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWT--LELKAMADRIISMRQQLFDALSARG 340 (407)
Q Consensus 267 ~v~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~ 340 (407)
=++.| +.++-.+..+-.++.+-.. +++.....++++=+. .++.-|+ ..+++..+++....-.|...|+..|
T Consensus 339 GvtkD~~gk~a~RLALQTREQHIrRDKA-TSNICTAQALLANma--AmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~ag 415 (1001)
T KOG2040|consen 339 GVTKDALGKEAYRLALQTREQHIRRDKA-TSNICTAQALLANMA--AMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAG 415 (1001)
T ss_pred eeeecccccHHHHHHHHHHHHHhhhhcc-chhhhHHHHHHHHHH--HHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 01111 1111122222222222221 233333333222211 1111122 4678888888888999999998887
Q ss_pred CCCCcccccCCceeEEec----CCCHHHHHHhHhhccEEE--cCCCeEEec--C-CCCCChhHHHHHHH
Q 015435 341 TPGDWSHIIKQIGMFTFT----GLNSEQVAFMTKEYHIYM--TSDGRISMA--G-LSSKTVPHLTDAIH 400 (407)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~gi~~--~~ggRis~~--~-~~~e~i~~~~~~l~ 400 (407)
.++... .||-.+ +-+.+.+.....+++|-+ ...+-|+++ . ++++|++.++..+.
T Consensus 416 ----hel~~k--~fFDTLkI~~~~s~~~~l~rA~~~~iNlr~~ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 416 ----HELQHK--PFFDTLKIRCGCSAEEVLDRAAKRQINLRLVEDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred ----hhhccc--cccceEEEEecCcHHHHHHHHHhhcCceEEeecCceEEeecccccHHHHHHHHHHHc
Confidence 343322 145433 335666554444455544 344544443 2 45577776665553
No 397
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=84.70 E-value=2.3 Score=39.61 Aligned_cols=71 Identities=11% Similarity=0.022 Sum_probs=49.3
Q ss_pred hHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeee
Q 015435 139 HPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFF 216 (407)
Q Consensus 139 ~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 216 (407)
..+.+...++++..+.+.|..++.+.....-+.-. .. .. .....+.|..++++|+++|++.|+++|+-||-
T Consensus 23 ~id~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~--~g-a~----~~~~~~~~~~YT~~di~elv~yA~~rgI~vIP 93 (329)
T cd06568 23 YIDLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTE--IG-GS----TEVGGGPGGYYTQEDYKDIVAYAAERHITVVP 93 (329)
T ss_pred HHHHHHHhCCcEEEEEeecCCcceeeecCcccccc--cc-cc----cccCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 34555678999999999877777776555444322 11 10 11234557789999999999999999988873
No 398
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=82.30 E-value=1.9 Score=43.33 Aligned_cols=34 Identities=15% Similarity=0.171 Sum_probs=30.3
Q ss_pred CCCHHHHHHHHHHHHHcCceeeeccccccccCCC
Q 015435 194 DPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGS 227 (407)
Q Consensus 194 ~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~~ 227 (407)
.-++++++++++.|+++|+-||+|=+|..|..++
T Consensus 210 yGtPedfk~fVD~aH~~GIgViLD~V~~HF~~d~ 243 (628)
T COG0296 210 YGTPEDFKALVDAAHQAGIGVILDWVPNHFPPDG 243 (628)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEEecCCcCCCCc
Confidence 3449999999999999999999999999988643
No 399
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=82.28 E-value=4 Score=37.53 Aligned_cols=68 Identities=12% Similarity=0.075 Sum_probs=48.0
Q ss_pred HHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceee
Q 015435 140 PKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPF 215 (407)
Q Consensus 140 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 215 (407)
.+.+...+.++..+.+.|..++.+.....-++-... .. .++ .+.|..++++|+++|++.|+++|+-||
T Consensus 22 id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g-~~------~~~-~~~~~~yT~~di~elv~yA~~rgI~vi 89 (303)
T cd02742 22 IDVLARYKINTFHWHLTDDQAWRIESKKFPELAEKG-GQ------INP-RSPGGFYTYAQLKDIIEYAAARGIEVI 89 (303)
T ss_pred HHHHHHhCCcEEEEeeecCCCceEeeCccchhhhhc-cc------ccC-CCCCCeECHHHHHHHHHHHHHcCCEEE
Confidence 445567899999999987777777665555443311 11 111 234567999999999999999998887
No 400
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=79.75 E-value=4.3 Score=38.12 Aligned_cols=65 Identities=15% Similarity=0.080 Sum_probs=47.9
Q ss_pred HHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeee
Q 015435 140 PKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFF 216 (407)
Q Consensus 140 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 216 (407)
.+.+...+.|+..+.+.|+.++.+......++.. .. ....|..++++|+++|++.|+++|+-||-
T Consensus 24 Id~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~--~g----------a~~~~~~YT~~di~eiv~yA~~rgI~vIP 88 (348)
T cd06562 24 IDAMAYNKLNVLHWHITDSQSFPLESPSYPELSK--KG----------AYSPSEVYTPEDVKEIVEYARLRGIRVIP 88 (348)
T ss_pred HHHHHHhCCcEEEEeEEcCCCceEeeCCCchhhh--cc----------CcCCCceECHHHHHHHHHHHHHcCCEEEE
Confidence 4455578899999999887777777665555432 11 11246678999999999999999988873
No 401
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=79.09 E-value=25 Score=31.73 Aligned_cols=108 Identities=10% Similarity=0.068 Sum_probs=63.9
Q ss_pred CCCCceEEeecCCcccHHHHHHHHHHhhcCCC--eEEecC--CCCCChHHHHhh--cCceeeEEEeecCCCCCcChhhHH
Q 015435 96 IKDNRVTTVQCLSGTGSLRVGAEFLARHYHQL--TIYIPQ--PTWGNHPKVFTL--AGLSVKTYRYYDPATRGLNFQGLL 169 (407)
Q Consensus 96 ~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd--~Vi~~~--p~y~~~~~~~~~--~G~~~~~v~~~~~~~~~~d~~~l~ 169 (407)
+..++|++ |.|.+...+..+ ..+..+|. +|++.+ |.+.++..+-.. .|+....++. .++-
T Consensus 160 ihsnEviL--T~g~SrTV~~FL--~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~d----------aaVf 225 (353)
T KOG1465|consen 160 IHSNEVIL--TLGSSRTVENFL--KHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIPD----------AAVF 225 (353)
T ss_pred hccCceEE--ecCccHHHHHHH--HHHHhccCceEEEEeecCCcccchHhhHHHHHcCCeeEEecc----------HHHH
Confidence 45689999 999888887773 33355554 477776 777766555554 4554444422 3455
Q ss_pred HHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeecccc
Q 015435 170 EDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAY 220 (407)
Q Consensus 170 ~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y 220 (407)
+.+.+ -.++++. ...--+-|-+....=...++..|++|-+.+|+=.-.
T Consensus 226 A~Msr--VnKVIig-t~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlAp~ 273 (353)
T KOG1465|consen 226 AMMSR--VNKVIIG-THAVLANGGLRAPSGVHTVALAAKHHSVPVIVLAPM 273 (353)
T ss_pred HHhhh--cceEEEE-eeeEecCCCeeccchHHHHHHHHHhcCCcEEEecch
Confidence 55542 2233333 222233344555556677888888888888876543
No 402
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=75.81 E-value=6.1 Score=36.43 Aligned_cols=63 Identities=16% Similarity=0.108 Sum_probs=43.5
Q ss_pred HHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeee
Q 015435 140 PKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFF 216 (407)
Q Consensus 140 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 216 (407)
.+.+...+.|+..+.+.|+.++.+.....-+... . . ..|..++++|+++|++.|+++|+-||-
T Consensus 24 Id~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~---------~-g----~~~~~yT~~di~elv~yA~~rgI~vIP 86 (311)
T cd06570 24 LDAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQ---------K-A----SDGLYYTQEQIREVVAYARDRGIRVVP 86 (311)
T ss_pred HHHHHHhCCeEEEEEEecCCCceeecCCCccccc---------c-C----CCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 4455577889999998777666665443322211 0 0 135569999999999999999987773
No 403
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=75.63 E-value=44 Score=30.64 Aligned_cols=55 Identities=24% Similarity=0.409 Sum_probs=36.7
Q ss_pred CcChhhHHH---HHHc-CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeecccc
Q 015435 162 GLNFQGLLE---DLRA-APSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAY 220 (407)
Q Consensus 162 ~~d~~~l~~---~i~~-~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y 220 (407)
.++.++++. .+.. ..+..++++ +.+=|.|. +.+...+|.++|+++|..+++|..-
T Consensus 110 ~is~~~~~~~l~~~~~~l~~~d~Vvl--sGSlP~g~--~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 110 EISEAELEQFLEQLKALLESDDIVVL--SGSLPPGV--PPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred CCCHHHHHHHHHHHHHhcccCCEEEE--eCCCCCCC--CHHHHHHHHHHHHhcCCeEEEECCh
Confidence 344444444 3433 234455555 34556665 4789999999999999999999863
No 404
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=74.30 E-value=27 Score=30.00 Aligned_cols=87 Identities=15% Similarity=0.151 Sum_probs=59.5
Q ss_pred CCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCC
Q 015435 98 DNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPS 177 (407)
Q Consensus 98 ~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 177 (407)
+.-|++ |.+++++|..++ .....+.|-.|+...-.-....+....+|+++..+++.+++ ++-.++..+...+.
T Consensus 7 ~k~VlI--tgcs~GGIG~al-a~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~----~V~~v~~evr~~~~ 79 (289)
T KOG1209|consen 7 PKKVLI--TGCSSGGIGYAL-AKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPE----EVVTVSGEVRANPD 79 (289)
T ss_pred CCeEEE--eecCCcchhHHH-HHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChH----HHHHHHHHHhhCCC
Confidence 367888 999999998884 12234578888888777777777777899888888775443 44445545554455
Q ss_pred CcEEEEecCCCCCC
Q 015435 178 GAIVLLHACAHNPT 191 (407)
Q Consensus 178 ~~~v~i~~~p~NPt 191 (407)
.++=++++|..-|+
T Consensus 80 Gkld~L~NNAG~~C 93 (289)
T KOG1209|consen 80 GKLDLLYNNAGQSC 93 (289)
T ss_pred CceEEEEcCCCCCc
Confidence 66666657666554
No 405
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=72.77 E-value=9.7 Score=35.92 Aligned_cols=77 Identities=14% Similarity=0.076 Sum_probs=48.9
Q ss_pred HHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCc--EEEE--ecCCCCCCCCCCCHHHHHHHHHHHHHcCceee
Q 015435 140 PKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGA--IVLL--HACAHNPTGVDPTLEQWEQIRQLMRSKGLLPF 215 (407)
Q Consensus 140 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~--~v~i--~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 215 (407)
.+.+...++++..+.+.|..++.+.....-++-.....+. ..-. ...-..|.|..++++|+++|++.|+++|+-||
T Consensus 24 Id~ma~~K~N~lhlHltDdq~~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~VI 103 (357)
T cd06563 24 IDLMALYKLNVFHWHLTDDQGWRIEIKKYPKLTEVGAWRGPTEIGLPQGGGDGTPYGGFYTQEEIREIVAYAAERGITVI 103 (357)
T ss_pred HHHHHHhccceEEEeeecCCCceecccCcchhhhcccccCcccccccccccCCCccCceECHHHHHHHHHHHHHcCCEEE
Confidence 4455578889999999877777776655544322100000 0000 01112344678999999999999999998887
Q ss_pred e
Q 015435 216 F 216 (407)
Q Consensus 216 ~ 216 (407)
-
T Consensus 104 P 104 (357)
T cd06563 104 P 104 (357)
T ss_pred E
Confidence 4
No 406
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=71.38 E-value=12 Score=36.42 Aligned_cols=77 Identities=13% Similarity=0.080 Sum_probs=49.5
Q ss_pred hHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCC-------cEEE--EecCC--CCCCCCCCCHHHHHHHHHHH
Q 015435 139 HPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSG-------AIVL--LHACA--HNPTGVDPTLEQWEQIRQLM 207 (407)
Q Consensus 139 ~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~-------~~v~--i~~~p--~NPtG~~~~~~~l~~i~~~~ 207 (407)
+.+.+...++++..+.+.|+.++.+.....-++......+ ..++ .-..+ ..+.+..++++|+++|++.|
T Consensus 27 ~Id~ma~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA 106 (445)
T cd06569 27 LLDQMAAYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYA 106 (445)
T ss_pred HHHHHHHhCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHH
Confidence 3445567889999999988888888776655443211000 0000 00011 12345679999999999999
Q ss_pred HHcCceee
Q 015435 208 RSKGLLPF 215 (407)
Q Consensus 208 ~~~~~~li 215 (407)
+++|+-||
T Consensus 107 ~~rgI~VI 114 (445)
T cd06569 107 KARHIEVI 114 (445)
T ss_pred HHcCCEEE
Confidence 99998877
No 407
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=70.36 E-value=56 Score=28.27 Aligned_cols=99 Identities=16% Similarity=0.149 Sum_probs=64.7
Q ss_pred eEEeecCCcccHHHHHHHHHHhhcCCCeEE-----ecC-C-CCC----Ch---HHHHhhcCceeeEEEeecCCCCCcChh
Q 015435 101 VTTVQCLSGTGSLRVGAEFLARHYHQLTIY-----IPQ-P-TWG----NH---PKVFTLAGLSVKTYRYYDPATRGLNFQ 166 (407)
Q Consensus 101 i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi-----~~~-p-~y~----~~---~~~~~~~G~~~~~v~~~~~~~~~~d~~ 166 (407)
+++ -+||..+..++ ...+..|-.|. .|. + +|. +. ...++..|..++..... ....-..+
T Consensus 4 ~aL--~SGGKDS~~Al---~~a~~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~--g~~e~eve 76 (223)
T COG2102 4 IAL--YSGGKDSFYAL---YLALEEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTS--GEEEREVE 76 (223)
T ss_pred EEE--EecCcHHHHHH---HHHHHcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecC--ccchhhHH
Confidence 566 89999998877 34466675542 222 2 222 22 22344678888777662 22345678
Q ss_pred hHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceee
Q 015435 167 GLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPF 215 (407)
Q Consensus 167 ~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 215 (407)
++.+++..- ..-.++ +|.+++..+..++-.+|++-|+.++
T Consensus 77 ~L~~~l~~l--~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~ 116 (223)
T COG2102 77 ELKEALRRL--KVDGIV-------AGAIASEYQKERVERLCEELGLKVY 116 (223)
T ss_pred HHHHHHHhC--cccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe
Confidence 888888732 222233 5899999999999999999997764
No 408
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=65.68 E-value=6.1 Score=37.05 Aligned_cols=68 Identities=15% Similarity=0.057 Sum_probs=44.8
Q ss_pred HHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeee
Q 015435 140 PKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFF 216 (407)
Q Consensus 140 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 216 (407)
.+.+...+.++..+.+.|..++.+....+.+.-... .. .++.+ |..++++|+++|++.|+++|+-||-
T Consensus 24 id~ma~~k~N~lhlhl~D~~~~~~~~~~~p~l~~~g---a~-----~~~~~-~~~yT~~di~~lv~yA~~~gI~VIP 91 (351)
T PF00728_consen 24 IDQMAYYKLNVLHLHLSDDQGFRLESKSYPELTEKG---AY-----RPSDA-GGYYTKEDIRELVAYAKERGIEVIP 91 (351)
T ss_dssp HHHHHHTT-SEEEEEEESSTCB-BEBSTSTHHHHTT---TE-----STTCT-ESEBEHHHHHHHHHHHHHTT-EEEE
T ss_pred HHHHHHcCCcEEEEEEecCCCCccccCCCccccccC---cc-----ccccc-cccCCHHHHHHHHHHHHHcCCceee
Confidence 445557899999999988777777665555543311 00 01113 4489999999999999999987774
No 409
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=64.55 E-value=37 Score=23.08 Aligned_cols=60 Identities=15% Similarity=0.271 Sum_probs=35.2
Q ss_pred hHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCC-HHHHHHHHHHHHHcCceeeec
Q 015435 139 HPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPT-LEQWEQIRQLMRSKGLLPFFD 217 (407)
Q Consensus 139 ~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~D 217 (407)
....++..|.++..+.. ..+.+.. ++..++++ +|.+. ++ ++++++|.+++++-|.++|.|
T Consensus 10 ~~~~L~~~g~~v~~~~~--------~~~~l~~-----~~~tll~i-----~~~~~-~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 10 LYQLLEEQGVKVERWRK--------PYEALEA-----DDGTLLVI-----GPDLR-LSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred HHHHHHHCCCeeEEecc--------cHHHhCC-----CCCEEEEE-----eCCCC-CCchHHHHHHHHHHHcCCEEEEeC
Confidence 44566667877766532 1223321 23334333 23333 44 589999999999888777764
No 410
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=64.25 E-value=46 Score=30.76 Aligned_cols=109 Identities=14% Similarity=0.208 Sum_probs=68.1
Q ss_pred ceEEeecCCcccHHHHHHHHHHhhc-CCCeEEecC-CCCC-Ch----HHHHhhcCceeeEEEeecCCCCCcCh-----hh
Q 015435 100 RVTTVQCLSGTGSLRVGAEFLARHY-HQLTIYIPQ-PTWG-NH----PKVFTLAGLSVKTYRYYDPATRGLNF-----QG 167 (407)
Q Consensus 100 ~i~~~~t~g~t~a~~~~~~~~~~~~-~gd~Vi~~~-p~y~-~~----~~~~~~~G~~~~~v~~~~~~~~~~d~-----~~ 167 (407)
+++++...+|++=...+.++...+. .|.+|++.. -+|- .. ..+.++.|+.++.-+ .+-|+ +.
T Consensus 140 ~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~------~G~DpAaVafDA 213 (340)
T COG0552 140 FVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGK------EGADPAAVAFDA 213 (340)
T ss_pred EEEEEEecCCCchHhHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccC------CCCCcHHHHHHH
Confidence 3444446666666666666666554 787777664 3442 22 224456777776643 23454 44
Q ss_pred HHHHHHcCCCCcEEEEecCC--CCCCCCCCCHHHHHHHHHHHHHcC------ceeeeccc
Q 015435 168 LLEDLRAAPSGAIVLLHACA--HNPTGVDPTLEQWEQIRQLMRSKG------LLPFFDSA 219 (407)
Q Consensus 168 l~~~i~~~~~~~~v~i~~~p--~NPtG~~~~~~~l~~i~~~~~~~~------~~li~D~~ 219 (407)
++.+.. .+..++++-... ||-+.. .++|++|..++++.. ++++.|..
T Consensus 214 i~~Aka--r~~DvvliDTAGRLhnk~nL---M~EL~KI~rV~~k~~~~ap~e~llvlDAt 268 (340)
T COG0552 214 IQAAKA--RGIDVVLIDTAGRLHNKKNL---MDELKKIVRVIKKDDPDAPHEILLVLDAT 268 (340)
T ss_pred HHHHHH--cCCCEEEEeCcccccCchhH---HHHHHHHHHHhccccCCCCceEEEEEEcc
Confidence 555444 566777774332 666666 789999999999854 77777986
No 411
>PLN03244 alpha-amylase; Provisional
Probab=64.21 E-value=11 Score=38.88 Aligned_cols=42 Identities=17% Similarity=0.154 Sum_probs=34.9
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCC
Q 015435 185 ACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASG 226 (407)
Q Consensus 185 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~ 226 (407)
.++--|+...-++++++++++.|+++|+-||.|=+|..+..+
T Consensus 428 t~fFApssRYGTPeDLK~LVD~aH~~GI~VILDvV~NH~~~d 469 (872)
T PLN03244 428 TNFFAASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAAD 469 (872)
T ss_pred CcccccCcccCCHHHHHHHHHHHHHCCCEEEEEecCccCCCc
Confidence 344556666666999999999999999999999999877754
No 412
>smart00642 Aamy Alpha-amylase domain.
Probab=62.54 E-value=10 Score=31.35 Aligned_cols=27 Identities=11% Similarity=0.331 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHcCceeeeccccccc
Q 015435 197 LEQWEQIRQLMRSKGLLPFFDSAYQGF 223 (407)
Q Consensus 197 ~~~l~~i~~~~~~~~~~li~D~~y~~~ 223 (407)
.++++++++.|+++|+.||.|-+....
T Consensus 69 ~~d~~~lv~~~h~~Gi~vilD~V~NH~ 95 (166)
T smart00642 69 MEDFKELVDAAHARGIKVILDVVINHT 95 (166)
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 799999999999999999999986433
No 413
>PRK04296 thymidine kinase; Provisional
Probab=61.69 E-value=97 Score=26.06 Aligned_cols=112 Identities=14% Similarity=0.114 Sum_probs=62.0
Q ss_pred hcCCCeEEecCCCCCC---hHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHc-CCCCcEEEEecCCCCCCCCCCCHH
Q 015435 123 HYHQLTIYIPQPTWGN---HPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRA-APSGAIVLLHACAHNPTGVDPTLE 198 (407)
Q Consensus 123 ~~~gd~Vi~~~p~y~~---~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~-~~~~~~v~i~~~p~NPtG~~~~~~ 198 (407)
...|.+|++..|.+.. ........|..+..+.. ...+++.+.+.+ .....++++ -.. ..++.+
T Consensus 27 ~~~g~~v~i~k~~~d~~~~~~~i~~~lg~~~~~~~~-------~~~~~~~~~~~~~~~~~dvviI-DEa-----q~l~~~ 93 (190)
T PRK04296 27 EERGMKVLVFKPAIDDRYGEGKVVSRIGLSREAIPV-------SSDTDIFELIEEEGEKIDCVLI-DEA-----QFLDKE 93 (190)
T ss_pred HHcCCeEEEEeccccccccCCcEecCCCCcccceEe-------CChHHHHHHHHhhCCCCCEEEE-Ecc-----ccCCHH
Confidence 3478888877664332 33345556654433322 133444444432 124456666 443 346677
Q ss_pred HHHHHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEec
Q 015435 199 QWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSY 251 (407)
Q Consensus 199 ~l~~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 251 (407)
++.++++.++..|+.+|+=.-..+|.... ......+....+.++.+.+.
T Consensus 94 ~v~~l~~~l~~~g~~vi~tgl~~~~~~~~----f~~~~~L~~~aD~V~~l~~v 142 (190)
T PRK04296 94 QVVQLAEVLDDLGIPVICYGLDTDFRGEP----FEGSPYLLALADKVTELKAI 142 (190)
T ss_pred HHHHHHHHHHHcCCeEEEEecCcccccCc----CchHHHHHHhcCeEEEeeEE
Confidence 78899999999998888766555444321 12223344556666655543
No 414
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=59.77 E-value=10 Score=38.69 Aligned_cols=35 Identities=17% Similarity=0.325 Sum_probs=28.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCceeeecccccccc
Q 015435 187 AHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFA 224 (407)
Q Consensus 187 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~ 224 (407)
|+.|++. .++++++++.|+++|+-||+|-+|....
T Consensus 221 p~~~~~~---~~efk~lV~~~H~~Gi~VilDvV~NH~~ 255 (605)
T TIGR02104 221 PYDPATR---IRELKQMIQALHENGIRVIMDVVYNHTY 255 (605)
T ss_pred CCccchH---HHHHHHHHHHHHHCCCEEEEEEEcCCcc
Confidence 4444443 6899999999999999999999987664
No 415
>PF05687 DUF822: Plant protein of unknown function (DUF822); InterPro: IPR008540 This group of proteins contains members of the BZR1/LAT61 family of plant transcriptional repressors involved in controlling the response to Brassinosteroids (BRs). BRs are plant hormones that play essential roles in growth and development. BZR1 binds directly to DNA repressing the synthesis of genes involved in BR synthesis. Phosphorylation of BZR1 by BIN1 targets BZR1 to the 20S proteosome, while dephosphorylation leads to nuclear accumulation of BZR1 [].
Probab=59.69 E-value=45 Score=26.50 Aligned_cols=51 Identities=20% Similarity=0.261 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHH---HHHHHHHHhcCCCCCcccccCCceeEEecCCCH-HHHHHhHhhccEEEcCCC
Q 015435 318 LKAMADRIISMR---QQLFDALSARGTPGDWSHIIKQIGMFTFTGLNS-EQVAFMTKEYHIYMTSDG 380 (407)
Q Consensus 318 ~~~~~~~~~~~~---~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gi~~~~gg 380 (407)
.++.+.+-+++| ..+...|+..|. +..... . |. |.+..|+.|.|..|.+.|
T Consensus 12 rEnnk~RERrRRAIaakIfaGLR~~Gn---y~Lp~~-a--------D~NeVLkALc~eAGw~Ve~DG 66 (150)
T PF05687_consen 12 RENNKRRERRRRAIAAKIFAGLRAHGN---YKLPKH-A--------DNNEVLKALCREAGWTVEPDG 66 (150)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCCCc-C--------CHHHHHHHHHHhCCEEEccCC
Confidence 334444444444 566677777763 332221 1 43 556788899999999987
No 416
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=58.05 E-value=1.2e+02 Score=25.97 Aligned_cols=94 Identities=14% Similarity=0.153 Sum_probs=53.8
Q ss_pred CCceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCC
Q 015435 98 DNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPS 177 (407)
Q Consensus 98 ~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 177 (407)
...+++ ..||..|..-+- .++..|-.|.+.+|....-...+...| ++..+.- + ...++ +.
T Consensus 9 gk~vlV--vGgG~va~rk~~---~Ll~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~--~----~~~~d----l~---- 68 (205)
T TIGR01470 9 GRAVLV--VGGGDVALRKAR---LLLKAGAQLRVIAEELESELTLLAEQG-GITWLAR--C----FDADI----LE---- 68 (205)
T ss_pred CCeEEE--ECcCHHHHHHHH---HHHHCCCEEEEEcCCCCHHHHHHHHcC-CEEEEeC--C----CCHHH----hC----
Confidence 357888 888888887763 335567778777776654333333333 4444422 1 12222 21
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCcee-eeccc
Q 015435 178 GAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLP-FFDSA 219 (407)
Q Consensus 178 ~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~l-i~D~~ 219 (407)
...+++ ..+++ .+.-.+++..|+++|+++ ++|+.
T Consensus 69 ~~~lVi-~at~d-------~~ln~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 69 GAFLVI-AATDD-------EELNRRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred CcEEEE-ECCCC-------HHHHHHHHHHHHHcCCEEEECCCc
Confidence 233344 23332 445578999999999777 35654
No 417
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=58.02 E-value=58 Score=25.36 Aligned_cols=58 Identities=14% Similarity=0.205 Sum_probs=40.4
Q ss_pred ceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEe-cC---CCCCCCCCCCHHHHHHHHHHHHHcC
Q 015435 148 LSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLH-AC---AHNPTGVDPTLEQWEQIRQLMRSKG 211 (407)
Q Consensus 148 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~-~~---p~NPtG~~~~~~~l~~i~~~~~~~~ 211 (407)
++++.+|+ .+.+|+.-+.+++.+ .-..|++. |. +|+..|.......++.+-++..+.|
T Consensus 29 vriIrvpC----~Grv~~~~il~Af~~--GADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~G 90 (124)
T PF02662_consen 29 VRIIRVPC----SGRVDPEFILRAFEK--GADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELG 90 (124)
T ss_pred eEEEEccC----CCccCHHHHHHHHHc--CCCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcC
Confidence 46666655 577999999999983 44555553 33 3557788777777777777777765
No 418
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=57.78 E-value=17 Score=36.49 Aligned_cols=32 Identities=16% Similarity=0.221 Sum_probs=27.7
Q ss_pred CCCHHHHHHHHHHHHHcCceeeeccccccccC
Q 015435 194 DPTLEQWEQIRQLMRSKGLLPFFDSAYQGFAS 225 (407)
Q Consensus 194 ~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~ 225 (407)
.-+.++++++++.|+++|+-||.|-+|..+..
T Consensus 156 ~G~~~e~k~lV~~aH~~Gi~VilD~V~NH~~~ 187 (542)
T TIGR02402 156 YGGPDDLKALVDAAHGLGLGVILDVVYNHFGP 187 (542)
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEccCCCCC
Confidence 33489999999999999999999999876653
No 419
>PHA02128 hypothetical protein
Probab=57.74 E-value=51 Score=24.50 Aligned_cols=93 Identities=13% Similarity=0.092 Sum_probs=55.7
Q ss_pred cCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEec
Q 015435 106 CLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~ 185 (407)
|.-.++.+.++-.+. .+.|-+++..+|....+..-.- .+ ++.+.+.+..+.+.-+..|..+.+++..
T Consensus 56 tgkt~gl~~lane~~--aqgg~r~itmn~ankrhv~dmv-------~~----~wrgdi~ist~selt~~cp~vkflmide 122 (151)
T PHA02128 56 TGKTTGLLHLANEVS--AQGGARIITMNSANKRHVQDMV-------SY----QWRGDIRISTISELTDRCPKVKFLMIDE 122 (151)
T ss_pred ccccchHHHHHHHHH--hcCCeEEEEeccchhhHHHHHh-------cc----cccCceEEeeHHHHhccCCeeEEEEEcc
Confidence 545566666664333 3466789988888765544322 12 2233344455555555456556666632
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCceee
Q 015435 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPF 215 (407)
Q Consensus 186 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 215 (407)
+ -=++-+....++|.+++-.||+-++
T Consensus 123 s----eytltsrh~rqeiydwagthgvefv 148 (151)
T PHA02128 123 S----EYTLTSRHQRQEIYDWAGTHGVEFV 148 (151)
T ss_pred h----hceecchhhHHHHHhhcccCceEEE
Confidence 2 2234567899999999999997554
No 420
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=57.09 E-value=51 Score=30.06 Aligned_cols=71 Identities=11% Similarity=0.102 Sum_probs=41.6
Q ss_pred CCCCChHHHHhh--cCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC
Q 015435 134 PTWGNHPKVFTL--AGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKG 211 (407)
Q Consensus 134 p~y~~~~~~~~~--~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~ 211 (407)
|+|+...+..+. ...-++.+|- ..-++.++++.. ...+.++|++. | ++.++-++|.++|+++|
T Consensus 52 ~~y~sv~dlp~~~~~DlAvi~vp~------~~v~~~l~e~~~--~gvk~avI~s~-----G--f~~~~~~~l~~~a~~~g 116 (291)
T PRK05678 52 PVFNTVAEAVEATGANASVIYVPP------PFAADAILEAID--AGIDLIVCITE-----G--IPVLDMLEVKAYLERKK 116 (291)
T ss_pred eccCCHHHHhhccCCCEEEEEcCH------HHHHHHHHHHHH--CCCCEEEEECC-----C--CCHHHHHHHHHHHHHcC
Confidence 345555555543 3444444432 124566677666 45566555433 2 23555568999999999
Q ss_pred ceeeeccc
Q 015435 212 LLPFFDSA 219 (407)
Q Consensus 212 ~~li~D~~ 219 (407)
+.++==.+
T Consensus 117 irvlGPNc 124 (291)
T PRK05678 117 TRLIGPNC 124 (291)
T ss_pred CEEECCCC
Confidence 99985554
No 421
>PF04019 DUF359: Protein of unknown function (DUF359); InterPro: IPR007164 This is family of archaebacterial proteins, which are about 170 amino acids in length. They have no known function. The most conserved portion of the protein contains the sequence GEEDL that may be important for its function.
Probab=56.95 E-value=91 Score=24.20 Aligned_cols=77 Identities=30% Similarity=0.380 Sum_probs=46.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHH-cCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeE
Q 015435 188 HNPTGVDPTLEQWEQIRQLMRS-KGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALS 266 (407)
Q Consensus 188 ~NPtG~~~~~~~l~~i~~~~~~-~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 266 (407)
.||-|+ ++.+-+..|.+...+ ..+.+++|. +.|...+..........+++ ||-|+- |.+.
T Consensus 40 ~NPpG~-It~el~~ai~~a~~~~~~~~I~V~G----------EEDL~~lPail~aP~gs~V~------YGQP~e--GvV~ 100 (121)
T PF04019_consen 40 KNPPGT-ITEELIEAIKKALESGKPVVIFVDG----------EEDLAVLPAILYAPEGSVVL------YGQPGE--GVVL 100 (121)
T ss_pred ECCCCc-ccHHHHHHHHHHHhCCCCEEEEEeC----------hHHHHHHHHHHhCCCCCEEE------ECCCCC--eEEE
Confidence 588888 457778888888744 457777776 23555555554444555555 455662 4543
Q ss_pred EeecChhhHHHHHHHHhh
Q 015435 267 IVCKTEDVASRVESQLKL 284 (407)
Q Consensus 267 ~v~~~~~~~~~~~~~~~~ 284 (407)
+.-+++.+.+..+.+..
T Consensus 101 -v~v~~~~k~~~~~ll~~ 117 (121)
T PF04019_consen 101 -VKVTEEAKRRARELLKK 117 (121)
T ss_pred -EEeCHHHHHHHHHHHHH
Confidence 44566666665554443
No 422
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=56.74 E-value=50 Score=30.61 Aligned_cols=77 Identities=17% Similarity=0.291 Sum_probs=53.9
Q ss_pred CCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCce
Q 015435 134 PTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLL 213 (407)
Q Consensus 134 p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~ 213 (407)
-.|++|...++..-++++++++..+ ...+-+..++. . .+-+++ .-|.. .+.++.++|++.|+++| +
T Consensus 59 k~y~syEeLakd~~vDvVyi~~~~~----qH~evv~l~l~--~-~K~VL~----EKPla--~n~~e~~~iveaA~~rg-v 124 (351)
T KOG2741|consen 59 KAYGSYEELAKDPEVDVVYISTPNP----QHYEVVMLALN--K-GKHVLC----EKPLA--MNVAEAEEIVEAAEARG-V 124 (351)
T ss_pred ccccCHHHHhcCCCcCEEEeCCCCc----cHHHHHHHHHH--c-CCcEEe----ccccc--CCHHHHHHHHHHHHHcC-c
Confidence 4689999999999999999987432 34444445555 2 233455 45543 45889999999999999 6
Q ss_pred eeecccccccc
Q 015435 214 PFFDSAYQGFA 224 (407)
Q Consensus 214 li~D~~y~~~~ 224 (407)
.+.|..+.-+.
T Consensus 125 ~~meg~~~R~~ 135 (351)
T KOG2741|consen 125 FFMEGLWWRFF 135 (351)
T ss_pred EEEeeeeeecC
Confidence 67777654333
No 423
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=56.24 E-value=1.3e+02 Score=27.39 Aligned_cols=102 Identities=18% Similarity=0.122 Sum_probs=62.8
Q ss_pred CceEEeecCCcccHHHHHHHHHHhhcCCCeEEecC---CCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC
Q 015435 99 NRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQ---PTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA 175 (407)
Q Consensus 99 ~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~---p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 175 (407)
..+.. +-|+|+.+..-. .-.....|..||+|- +.+..+.+.+..+| ++.+.+. |. -|.+.+++.+.
T Consensus 61 GiVaT--VFGAtGFlGryv-vnklak~GSQviiPyR~d~~~~r~lkvmGdLG-Qvl~~~f-d~----~DedSIr~vvk-- 129 (391)
T KOG2865|consen 61 GIVAT--VFGATGFLGRYV-VNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLG-QVLFMKF-DL----RDEDSIRAVVK-- 129 (391)
T ss_pred ceEEE--EecccccccHHH-HHHHhhcCCeEEEeccCCccchhheeeccccc-ceeeecc-CC----CCHHHHHHHHH--
Confidence 45555 567777665541 222334688999984 55666666666665 4555554 22 48899999987
Q ss_pred CCCcEEEEecCCCCCCCCC----CCHHHHHHHHHHHHHcCc
Q 015435 176 PSGAIVLLHACAHNPTGVD----PTLEQWEQIRQLMRSKGL 212 (407)
Q Consensus 176 ~~~~~v~i~~~p~NPtG~~----~~~~~l~~i~~~~~~~~~ 212 (407)
...-+|=++ --..+|+.. ....--++|+.+|++-|+
T Consensus 130 ~sNVVINLI-Grd~eTknf~f~Dvn~~~aerlAricke~GV 169 (391)
T KOG2865|consen 130 HSNVVINLI-GRDYETKNFSFEDVNVHIAERLARICKEAGV 169 (391)
T ss_pred hCcEEEEee-ccccccCCcccccccchHHHHHHHHHHhhCh
Confidence 334444342 336677663 223345899999999885
No 424
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=55.68 E-value=80 Score=27.33 Aligned_cols=63 Identities=19% Similarity=0.265 Sum_probs=39.5
Q ss_pred HHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeee
Q 015435 140 PKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFF 216 (407)
Q Consensus 140 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 216 (407)
...++..|..++..++ -|.+.|.+++. ....+++...+.++ -..+.-..+++.|++.|+-.++
T Consensus 37 ~~~l~~~g~~vv~~d~-------~~~~~l~~al~---g~d~v~~~~~~~~~----~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 37 AQQLQALGAEVVEADY-------DDPESLVAALK---GVDAVFSVTPPSHP----SELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHHHHTTTEEEES-T-------T-HHHHHHHHT---TCSEEEEESSCSCC----CHHHHHHHHHHHHHHHT-SEEE
T ss_pred hhhhhcccceEeeccc-------CCHHHHHHHHc---CCceEEeecCcchh----hhhhhhhhHHHhhhccccceEE
Confidence 3445678988876654 27899999997 34444442333322 2256788999999999876664
No 425
>PRK12313 glycogen branching enzyme; Provisional
Probab=51.79 E-value=24 Score=36.22 Aligned_cols=33 Identities=15% Similarity=0.130 Sum_probs=28.5
Q ss_pred CCCCHHHHHHHHHHHHHcCceeeeccccccccC
Q 015435 193 VDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFAS 225 (407)
Q Consensus 193 ~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~ 225 (407)
..-+.++++++++.|+++|+-||.|-++..+..
T Consensus 215 ~~Gt~~d~k~lv~~~H~~Gi~VilD~V~nH~~~ 247 (633)
T PRK12313 215 RYGTPEDFMYLVDALHQNGIGVILDWVPGHFPK 247 (633)
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCC
Confidence 345689999999999999999999999876654
No 426
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=51.74 E-value=83 Score=28.76 Aligned_cols=56 Identities=16% Similarity=0.200 Sum_probs=35.2
Q ss_pred CCCCceEEeecCCcccHHHHHHHHHHhhcCCCe--EEecCCCCCChHHHHhhcCceeeEEEe
Q 015435 96 IKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLT--IYIPQPTWGNHPKVFTLAGLSVKTYRY 155 (407)
Q Consensus 96 ~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~--Vi~~~p~y~~~~~~~~~~G~~~~~v~~ 155 (407)
+++...++ ..+||+.++.++. .+.. .|=+ +++|+..-......++.+|++++.+|-
T Consensus 59 l~pG~tIV-E~TSGNTGI~LA~--vaa~-~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 59 LKPGGTIV-EATSGNTGIALAM--VAAA-KGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCCCCEEE-EcCCChHHHHHHH--HHHH-cCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 44455444 3777777777773 3322 4433 344444445567788999999999976
No 427
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=50.50 E-value=25 Score=35.95 Aligned_cols=33 Identities=12% Similarity=0.037 Sum_probs=28.5
Q ss_pred CCCCHHHHHHHHHHHHHcCceeeeccccccccC
Q 015435 193 VDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFAS 225 (407)
Q Consensus 193 ~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~ 225 (407)
..-++++++++++.|+++|+-||.|-++..+..
T Consensus 201 ~~Gt~~dlk~lV~~~H~~Gi~VilD~V~NH~~~ 233 (613)
T TIGR01515 201 RFGTPDDFMYFVDACHQAGIGVILDWVPGHFPK 233 (613)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEecccCcCC
Confidence 445588999999999999999999999876654
No 428
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=50.46 E-value=98 Score=22.67 Aligned_cols=70 Identities=6% Similarity=0.037 Sum_probs=45.2
Q ss_pred CCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCcee
Q 015435 135 TWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLP 214 (407)
Q Consensus 135 ~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~l 214 (407)
....|...++..|.+.+.. -. +.+..-....+...+. +..+|++..+ ..+.+-...+-+.|+++|+.+
T Consensus 11 ~~~~~~~~~~~~G~~~~~h-g~-~~~~~~~~~~l~~~i~---~aD~VIv~t~-------~vsH~~~~~vk~~akk~~ip~ 78 (97)
T PF10087_consen 11 RERRYKRILEKYGGKLIHH-GR-DGGDEKKASRLPSKIK---KADLVIVFTD-------YVSHNAMWKVKKAAKKYGIPI 78 (97)
T ss_pred cHHHHHHHHHHcCCEEEEE-ec-CCCCccchhHHHHhcC---CCCEEEEEeC-------CcChHHHHHHHHHHHHcCCcE
Confidence 3456778888999998888 21 2222222234777665 3455555322 244778889999999999888
Q ss_pred ee
Q 015435 215 FF 216 (407)
Q Consensus 215 i~ 216 (407)
+.
T Consensus 79 ~~ 80 (97)
T PF10087_consen 79 IY 80 (97)
T ss_pred EE
Confidence 74
No 429
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=49.94 E-value=76 Score=28.87 Aligned_cols=71 Identities=11% Similarity=0.138 Sum_probs=40.5
Q ss_pred CCCCChHHHHhh--cCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC
Q 015435 134 PTWGNHPKVFTL--AGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKG 211 (407)
Q Consensus 134 p~y~~~~~~~~~--~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~ 211 (407)
|+|+...++.+. ...-++.+|- ..-++.++++.. ...+.+++++. | ++..+-++|.++|+++|
T Consensus 50 ~~y~sv~dlp~~~~~Dlavi~vpa------~~v~~~l~e~~~--~Gvk~avIis~-----G--f~e~~~~~l~~~a~~~g 114 (286)
T TIGR01019 50 PVFDSVKEAVEETGANASVIFVPA------PFAADAIFEAID--AGIELIVCITE-----G--IPVHDMLKVKRYMEESG 114 (286)
T ss_pred eccCCHHHHhhccCCCEEEEecCH------HHHHHHHHHHHH--CCCCEEEEECC-----C--CCHHHHHHHHHHHHHcC
Confidence 445555555443 2333444432 123566666665 45556555333 2 23445689999999999
Q ss_pred ceeeeccc
Q 015435 212 LLPFFDSA 219 (407)
Q Consensus 212 ~~li~D~~ 219 (407)
+.++==.+
T Consensus 115 irilGPNc 122 (286)
T TIGR01019 115 TRLIGPNC 122 (286)
T ss_pred CEEECCCC
Confidence 99885554
No 430
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=49.69 E-value=13 Score=33.69 Aligned_cols=30 Identities=10% Similarity=0.279 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHcCceeeeccccccccCC
Q 015435 197 LEQWEQIRQLMRSKGLLPFFDSAYQGFASG 226 (407)
Q Consensus 197 ~~~l~~i~~~~~~~~~~li~D~~y~~~~~~ 226 (407)
.++++++++.|+++|+.||.|-+.......
T Consensus 51 ~~d~~~Lv~~~h~~gi~VilD~V~NH~~~~ 80 (316)
T PF00128_consen 51 MEDFKELVDAAHKRGIKVILDVVPNHTSDD 80 (316)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEETSEEETT
T ss_pred hhhhhhhhhccccccceEEEeeeccccccc
Confidence 899999999999999999999998766643
No 431
>PLN02960 alpha-amylase
Probab=49.67 E-value=26 Score=36.93 Aligned_cols=37 Identities=19% Similarity=0.176 Sum_probs=31.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCC
Q 015435 190 PTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASG 226 (407)
Q Consensus 190 PtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~ 226 (407)
|++..-++++++++++.|+++|+-||.|-++..+..+
T Consensus 458 ~~~~yGtp~dfk~LVd~aH~~GI~VILDvV~NH~~~d 494 (897)
T PLN02960 458 VSSRFGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAAD 494 (897)
T ss_pred cccccCCHHHHHHHHHHHHHCCCEEEEEecccccCCc
Confidence 3445567899999999999999999999999877754
No 432
>PRK05703 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=49.24 E-value=2.6e+02 Score=27.15 Aligned_cols=129 Identities=16% Similarity=0.194 Sum_probs=60.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhh---cCCCeEEecC-CCCC-C----hHHHHhhcCce
Q 015435 79 DFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARH---YHQLTIYIPQ-PTWG-N----HPKVFTLAGLS 149 (407)
Q Consensus 79 ~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~---~~gd~Vi~~~-p~y~-~----~~~~~~~~G~~ 149 (407)
.+++.+++.+............++++..++|++=...+.++...+ ..|.+|.+.+ -.|- . .....+..|+.
T Consensus 201 ~~~~~L~~~l~~~~~~~~~~~~~i~~vGptGvGKTTt~~kLA~~~~~~~~g~~V~li~~D~~r~~a~eqL~~~a~~~~vp 280 (424)
T PRK05703 201 YLLELLANMIPVRVEDILKQGGVVALVGPTGVGKTTTLAKLAARYALLYGKKKVALITLDTYRIGAVEQLKTYAKIMGIP 280 (424)
T ss_pred HHHHHHHHHhCccccccccCCcEEEEECCCCCCHHHHHHHHHHHHHHhcCCCeEEEEECCccHHHHHHHHHHHHHHhCCc
Confidence 455555555522211112223455555777777666665555443 3456665443 2231 1 11222334433
Q ss_pred eeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHH----HcCceeeecccc
Q 015435 150 VKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMR----SKGLLPFFDSAY 220 (407)
Q Consensus 150 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~----~~~~~li~D~~y 220 (407)
+... .+.+++.+.+........|+| ..|.... .....+.++.++.+ ....+|+++..+
T Consensus 281 ~~~~---------~~~~~l~~~l~~~~~~DlVlI-Dt~G~~~---~d~~~~~~L~~ll~~~~~~~~~~LVl~a~~ 342 (424)
T PRK05703 281 VEVV---------YDPKELAKALEQLRDCDVILI-DTAGRSQ---RDKRLIEELKALIEFSGEPIDVYLVLSATT 342 (424)
T ss_pred eEcc---------CCHHhHHHHHHHhCCCCEEEE-eCCCCCC---CCHHHHHHHHHHHhccCCCCeEEEEEECCC
Confidence 3221 234556666654445677777 3333221 23444555555554 224577777653
No 433
>PRK05402 glycogen branching enzyme; Provisional
Probab=48.76 E-value=28 Score=36.43 Aligned_cols=35 Identities=14% Similarity=0.093 Sum_probs=29.5
Q ss_pred CCCCCCHHHHHHHHHHHHHcCceeeeccccccccC
Q 015435 191 TGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFAS 225 (407)
Q Consensus 191 tG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~ 225 (407)
....-+.++++++++.|+++|+-||.|-++..+..
T Consensus 308 ~~~~Gt~~dfk~lV~~~H~~Gi~VilD~V~NH~~~ 342 (726)
T PRK05402 308 TSRFGTPDDFRYFVDACHQAGIGVILDWVPAHFPK 342 (726)
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEECCCCCCC
Confidence 34456689999999999999999999999876653
No 434
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=48.68 E-value=2e+02 Score=25.84 Aligned_cols=113 Identities=12% Similarity=0.216 Sum_probs=56.6
Q ss_pred ceEEeecCCcccHHHHHHHHHHhh-cCCCeEEecC--CCCCCh----HHHHhhcCceeeEEEeecCCCCCcChhhHH-HH
Q 015435 100 RVTTVQCLSGTGSLRVGAEFLARH-YHQLTIYIPQ--PTWGNH----PKVFTLAGLSVKTYRYYDPATRGLNFQGLL-ED 171 (407)
Q Consensus 100 ~i~~~~t~g~t~a~~~~~~~~~~~-~~gd~Vi~~~--p~y~~~----~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~-~~ 171 (407)
.++.+..++|.+=...+.++...+ ..|.+|.+.+ +....- ..+.+..|..+... ..+.|+..+. +.
T Consensus 73 ~vi~l~G~~G~GKTTt~akLA~~l~~~g~~V~li~~D~~r~~a~~ql~~~~~~~~i~~~~~------~~~~dp~~~~~~~ 146 (272)
T TIGR00064 73 NVILFVGVNGVGKTTTIAKLANKLKKQGKSVLLAAGDTFRAAAIEQLEEWAKRLGVDVIKQ------KEGADPAAVAFDA 146 (272)
T ss_pred eEEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEeCCCCCHHHHHHHHHHHHhCCeEEEeC------CCCCCHHHHHHHH
Confidence 455544566655555555454433 3566765544 322221 22344556433322 1223443321 22
Q ss_pred HHc--CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHH------HcCceeeeccc
Q 015435 172 LRA--APSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMR------SKGLLPFFDSA 219 (407)
Q Consensus 172 i~~--~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~------~~~~~li~D~~ 219 (407)
+.. ..+...+++-+.+.+++-. --.++++++.+.+. .+++++++|..
T Consensus 147 l~~~~~~~~D~ViIDT~G~~~~d~-~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~ 201 (272)
T TIGR00064 147 IQKAKARNIDVVLIDTAGRLQNKV-NLMDELKKIKRVIKKVDKDAPDEVLLVLDAT 201 (272)
T ss_pred HHHHHHCCCCEEEEeCCCCCcchH-HHHHHHHHHHHHHhcccCCCCceEEEEEECC
Confidence 211 1446778885554544311 11446777777777 57788888885
No 435
>PLN02447 1,4-alpha-glucan-branching enzyme
Probab=47.89 E-value=27 Score=36.39 Aligned_cols=33 Identities=18% Similarity=0.094 Sum_probs=28.7
Q ss_pred CCCCHHHHHHHHHHHHHcCceeeeccccccccC
Q 015435 193 VDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFAS 225 (407)
Q Consensus 193 ~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~ 225 (407)
..-++++++++++.|+++|+-||.|-++..+..
T Consensus 295 ~~Gtp~dlk~LVd~aH~~GI~VilDvV~nH~~~ 327 (758)
T PLN02447 295 RSGTPEDLKYLIDKAHSLGLRVLMDVVHSHASK 327 (758)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEeccccccc
Confidence 345589999999999999999999999877764
No 436
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=47.00 E-value=1e+02 Score=24.61 Aligned_cols=82 Identities=16% Similarity=0.141 Sum_probs=45.3
Q ss_pred CCeEEecCCCCCChHHHHhhc-CceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHH
Q 015435 126 QLTIYIPQPTWGNHPKVFTLA-GLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIR 204 (407)
Q Consensus 126 gd~Vi~~~p~y~~~~~~~~~~-G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~ 204 (407)
|=+++... +....++.. |+++..+ ...+.++ + ..+.+.+. .+..-++| +.|. |+|.-....+-..|.
T Consensus 32 Gf~l~AT~----gTa~~L~~~~Gi~v~~v-i~~~~gg--~-~~i~~~I~--~g~i~lVI-nt~d-p~~~~~~~~D~~~IR 99 (142)
T PRK05234 32 QHELYATG----TTGGLIQEATGLDVTRL-LSGPLGG--D-QQIGALIA--EGKIDMLI-FFRD-PLTAQPHDPDVKALL 99 (142)
T ss_pred CCEEEEeC----hHHHHHHhccCCeeEEE-EcCCCCC--c-hhHHHHHH--cCceeEEE-EecC-CCCCCcccchHHHHH
Confidence 55554332 345566666 8888777 4222222 2 34566665 23333333 3331 133322245778999
Q ss_pred HHHHHcCceeeeccc
Q 015435 205 QLMRSKGLLPFFDSA 219 (407)
Q Consensus 205 ~~~~~~~~~li~D~~ 219 (407)
..|.+|++.++..-.
T Consensus 100 R~Av~~~IP~~T~l~ 114 (142)
T PRK05234 100 RLADVWNIPVATNRA 114 (142)
T ss_pred HHHHHcCCCEEcCHH
Confidence 999999998886553
No 437
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=46.67 E-value=1.7e+02 Score=27.11 Aligned_cols=21 Identities=14% Similarity=0.118 Sum_probs=12.2
Q ss_pred HHHhHhhccEEEcCCCeEEec
Q 015435 365 VAFMTKEYHIYMTSDGRISMA 385 (407)
Q Consensus 365 ~~~~l~~~gi~~~~ggRis~~ 385 (407)
+..+..+.||.-.+|+..++.
T Consensus 270 ~~~~a~~~g~i~k~g~w~~~~ 290 (321)
T TIGR02012 270 IIDLAVELDIIKKAGSWYSYG 290 (321)
T ss_pred HHHHHHhCCcEEcccCEEEEC
Confidence 444455577777776655543
No 438
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=46.53 E-value=2.4e+02 Score=26.01 Aligned_cols=105 Identities=12% Similarity=0.038 Sum_probs=58.2
Q ss_pred CCCceEEeecCCcccHHHHHHHHHHhhcCC--CeEEecC--CCCCChHH--HHhhcCceeeEEEeecCCCCCcChhhHHH
Q 015435 97 KDNRVTTVQCLSGTGSLRVGAEFLARHYHQ--LTIYIPQ--PTWGNHPK--VFTLAGLSVKTYRYYDPATRGLNFQGLLE 170 (407)
Q Consensus 97 ~~~~i~~~~t~g~t~a~~~~~~~~~~~~~g--d~Vi~~~--p~y~~~~~--~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 170 (407)
.++.+++ |.|-+.....++ ......| -+|++.+ |...+... -+...|+++..++- ..+-.
T Consensus 119 ~~g~~IL--T~~~S~tv~~~l--~~A~~~~k~~~V~v~EsrP~~~G~~~a~~L~~~GI~vtlI~D----------sav~~ 184 (310)
T PRK08535 119 RDGDVIM--THCNSSAALSVI--KTAHEQGKDIEVIATETRPRNQGHITAKELAEYGIPVTLIVD----------SAVRY 184 (310)
T ss_pred CCCCEEE--EeCCcHHHHHHH--HHHHHCCCeEEEEEecCCchhhHHHHHHHHHHCCCCEEEEeh----------hHHHH
Confidence 3467888 888776666653 3334344 3566665 55555322 23356877777643 12222
Q ss_pred HHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeecc
Q 015435 171 DLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDS 218 (407)
Q Consensus 171 ~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~ 218 (407)
.+. +...+++=...-.+.|.++++-=-..++-+|+.|++.+++=.
T Consensus 185 ~m~---~vd~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V~a 229 (310)
T PRK08535 185 FMK---DVDKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMVAA 229 (310)
T ss_pred HHH---hCCEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEEec
Confidence 333 233444422333344555555555667778899988777643
No 439
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=46.51 E-value=22 Score=35.04 Aligned_cols=28 Identities=14% Similarity=0.143 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHcCceeeecccccccc
Q 015435 197 LEQWEQIRQLMRSKGLLPFFDSAYQGFA 224 (407)
Q Consensus 197 ~~~l~~i~~~~~~~~~~li~D~~y~~~~ 224 (407)
.++++++++.|+++|+.||+|-++....
T Consensus 80 ~~dl~~Li~~~H~~Gi~vi~D~V~NH~~ 107 (479)
T PRK09441 80 KEELLNAIDALHENGIKVYADVVLNHKA 107 (479)
T ss_pred HHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 9999999999999999999999976655
No 440
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=46.46 E-value=2.5e+02 Score=26.26 Aligned_cols=104 Identities=13% Similarity=0.065 Sum_probs=58.0
Q ss_pred CceEEeecCCcccHHHHHHHHHHhhcCCCeE--EecCCCCC------ChHHHHhhcCceeeEEEeecCCCCCcChhhHHH
Q 015435 99 NRVTTVQCLSGTGSLRVGAEFLARHYHQLTI--YIPQPTWG------NHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLE 170 (407)
Q Consensus 99 ~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~V--i~~~p~y~------~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 170 (407)
+-++. .+||-.+..++..+... -|.++ +..++.|. +....++.+|+....+.. |++.+.+
T Consensus 61 D~iV~--lSGGkDSs~la~ll~~~--~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~--------d~~~~~~ 128 (343)
T TIGR03573 61 DCIIG--VSGGKDSTYQAHVLKKK--LGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITI--------NPETFRK 128 (343)
T ss_pred CEEEE--CCCCHHHHHHHHHHHHH--hCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeC--------CHHHHHH
Confidence 45666 88988888776423222 24443 45566664 234455568888877754 4444444
Q ss_pred HHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccc
Q 015435 171 DLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGF 223 (407)
Q Consensus 171 ~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~ 223 (407)
..... . .+..+|...+. ......+.++|+++|+.+|+.....+-
T Consensus 129 l~~~~--~------~~~~~pc~~c~-~~~~~~l~~~A~~~gi~~Il~G~~~dE 172 (343)
T TIGR03573 129 LQRAY--F------KKVGDPEWPQD-HAIFASVYQVALKFNIPLIIWGENIAE 172 (343)
T ss_pred HHHHH--H------hccCCCchhhh-hHHHHHHHHHHHHhCCCEEEeCCCHHH
Confidence 33210 0 01123332221 334677888899999999987765443
No 441
>PRK13352 thiamine biosynthesis protein ThiC; Provisional
Probab=45.16 E-value=1.6e+02 Score=28.24 Aligned_cols=160 Identities=14% Similarity=0.119 Sum_probs=86.1
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcc
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGT 110 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t 110 (407)
+..||.++|.. ++. ..+...++++..+.....+....-+.-..+.+.|+.+.+.. .+-+ ||
T Consensus 60 ~tKVNaNIGtS--~~~-~d~~~E~~K~~~A~~~GADtiMDLStggdl~~iR~~il~~s-----------~vpv-----GT 120 (431)
T PRK13352 60 RTKVNANIGTS--SDI-SDIEEELEKAKVAVKYGADTIMDLSTGGDLDEIRRAIIEAS-----------PVPV-----GT 120 (431)
T ss_pred eeEEeeeecCC--CCC-CCHHHHHHHHHHHHHcCCCeEeeccCCCCHHHHHHHHHHcC-----------CCCC-----cC
Confidence 56788888864 122 44556666665555412223333333345777787766643 2333 44
Q ss_pred cHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHh---hcCceeeEEEeecCCCCCcChhhHHHHHHcCCCC---------
Q 015435 111 GSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFT---LAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSG--------- 178 (407)
Q Consensus 111 ~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~---~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~--------- 178 (407)
-=++-+. .....++..+. +.+..-+.+.++ .-|+....+.+ +++.+.++..-....-.
T Consensus 121 VPiYqa~--~~~~~k~~~~~--~mt~d~~~~~ie~qa~~GVDfmTiHc------Gi~~~~~~~~~~~~R~~giVSRGGs~ 190 (431)
T PRK13352 121 VPIYQAA--VEAARKYGSVV--DMTEDDLFDVIEKQAKDGVDFMTIHC------GVTRETLERLKKSGRIMGIVSRGGSF 190 (431)
T ss_pred hhHHHHH--HHHHhcCCChh--hCCHHHHHHHHHHHHHhCCCEEEEcc------chhHHHHHHHHhcCCccCeecCCHHH
Confidence 4444442 22232222221 111222333333 44888877765 46666666654421111
Q ss_pred -cEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeecccccccc
Q 015435 179 -AIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFA 224 (407)
Q Consensus 179 -~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~ 224 (407)
...++.++-.||. -+...+|+++|++|++.|=.=+.....+
T Consensus 191 ~~~WM~~n~~ENPl-----ye~fD~lLeI~~~yDVtlSLGDglRPG~ 232 (431)
T PRK13352 191 LAAWMLHNNKENPL-----YEHFDYLLEILKEYDVTLSLGDGLRPGC 232 (431)
T ss_pred HHHHHHHcCCcCch-----HHHHHHHHHHHHHhCeeeeccCCcCCCc
Confidence 1123446678888 7799999999999998876555554443
No 442
>PRK01160 hypothetical protein; Provisional
Probab=44.69 E-value=1.7e+02 Score=24.48 Aligned_cols=78 Identities=19% Similarity=0.223 Sum_probs=44.2
Q ss_pred CCCCCCCCCHHHHHHHHHH---HHHc-CceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcc
Q 015435 188 HNPTGVDPTLEQWEQIRQL---MRSK-GLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVG 263 (407)
Q Consensus 188 ~NPtG~~~~~~~l~~i~~~---~~~~-~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 263 (407)
.||-|++ +.+-++.|.+. +... .+.+++|. +.|...+..........+++ ||-|+. |
T Consensus 90 ~NPpGtI-t~el~~ai~~a~~~~~~~~~~~I~VdG----------EEDLa~lP~il~aP~gs~Vl------YGQP~e--G 150 (178)
T PRK01160 90 RNPPGTI-TLALLRAIKKAFSLIERGKKVRIEVNG----------EEDLAVIPAVLYAPLGTVVA------YGQPDE--G 150 (178)
T ss_pred ECCCCcc-cHHHHHHHHHHHHhhhcCCeEEEEEcC----------hHHHHHHHHHHhcCCCCEEE------eCCCCC--c
Confidence 6888884 56666776665 3322 24666665 23555555544445555555 445553 5
Q ss_pred eeEEeecChhhHHHHHHHHhhh
Q 015435 264 ALSIVCKTEDVASRVESQLKLV 285 (407)
Q Consensus 264 ~~~~v~~~~~~~~~~~~~~~~~ 285 (407)
.+. +..+++.+.++.+.+..+
T Consensus 151 vV~-v~v~~e~K~~~~~ll~~~ 171 (178)
T PRK01160 151 MVL-IKVTPECKRRCAEILRKM 171 (178)
T ss_pred EEE-EEeCHHHHHHHHHHHHHh
Confidence 553 455677667666655544
No 443
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=44.54 E-value=3e+02 Score=26.65 Aligned_cols=106 Identities=11% Similarity=0.061 Sum_probs=54.1
Q ss_pred eEEeecCCcccHHHHHHHHHHhhc-CCCeEEecCC-CCC-ChHHHHh----hcCceeeEEEeecCCCCCcChhhHHHHHH
Q 015435 101 VTTVQCLSGTGSLRVGAEFLARHY-HQLTIYIPQP-TWG-NHPKVFT----LAGLSVKTYRYYDPATRGLNFQGLLEDLR 173 (407)
Q Consensus 101 i~~~~t~g~t~a~~~~~~~~~~~~-~gd~Vi~~~p-~y~-~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~i~ 173 (407)
++.+..++|.+=...+.++...+. .|.+|.+.+. .|- .....+. ..|+.+... .+++++.+.+.
T Consensus 243 vI~LVGptGvGKTTTiaKLA~~L~~~GkkVglI~aDt~RiaAvEQLk~yae~lgipv~v~---------~d~~~L~~aL~ 313 (436)
T PRK11889 243 TIALIGPTGVGKTTTLAKMAWQFHGKKKTVGFITTDHSRIGTVQQLQDYVKTIGFEVIAV---------RDEAAMTRALT 313 (436)
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHhhhcCCcEEec---------CCHHHHHHHHH
Confidence 444347777666666655554443 5656544432 332 2222222 344333222 25566766664
Q ss_pred cCC---CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHH---cCceeeeccc
Q 015435 174 AAP---SGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRS---KGLLPFFDSA 219 (407)
Q Consensus 174 ~~~---~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~---~~~~li~D~~ 219 (407)
... +...++|-+.+.|+ -+.+.+.++.++.++ +.++|++|..
T Consensus 314 ~lk~~~~~DvVLIDTaGRs~----kd~~lm~EL~~~lk~~~PdevlLVLsAT 361 (436)
T PRK11889 314 YFKEEARVDYILIDTAGKNY----RASETVEEMIETMGQVEPDYICLTLSAS 361 (436)
T ss_pred HHHhccCCCEEEEeCccccC----cCHHHHHHHHHHHhhcCCCeEEEEECCc
Confidence 322 35777885444444 224446666666554 5577777775
No 444
>PRK14706 glycogen branching enzyme; Provisional
Probab=44.53 E-value=34 Score=35.10 Aligned_cols=33 Identities=15% Similarity=0.128 Sum_probs=28.4
Q ss_pred CCCCHHHHHHHHHHHHHcCceeeeccccccccC
Q 015435 193 VDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFAS 225 (407)
Q Consensus 193 ~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~ 225 (407)
..-++++++++++.|+++|+-||.|-++..+..
T Consensus 212 ~~g~~~~~~~lv~~~H~~gi~VilD~v~nH~~~ 244 (639)
T PRK14706 212 RLGTPEDFKYLVNHLHGLGIGVILDWVPGHFPT 244 (639)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEecccccCc
Confidence 344589999999999999999999999877654
No 445
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=44.53 E-value=2.5e+02 Score=25.70 Aligned_cols=105 Identities=12% Similarity=-0.021 Sum_probs=60.2
Q ss_pred CCCCceEEeecCCcccHHHHHHHHHHhhcCCC--eEEecC--CCCCChHH--HHhhcCceeeEEEeecCCCCCcChhhHH
Q 015435 96 IKDNRVTTVQCLSGTGSLRVGAEFLARHYHQL--TIYIPQ--PTWGNHPK--VFTLAGLSVKTYRYYDPATRGLNFQGLL 169 (407)
Q Consensus 96 ~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd--~Vi~~~--p~y~~~~~--~~~~~G~~~~~v~~~~~~~~~~d~~~l~ 169 (407)
+.+.++++ |.|-+.+...++ ......|. +|++.+ |.+.+... .++.+|..+..++- ..+-
T Consensus 117 i~dg~~Il--Th~~S~~v~~~l--~~A~~~~k~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~D----------sa~~ 182 (301)
T COG1184 117 IHDGDVIL--THSFSKTVLEVL--KTAADRGKRFKVIVTESRPRGEGRIMAKELRQSGIPVTVIVD----------SAVG 182 (301)
T ss_pred ccCCCEEE--EecCcHHHHHHH--HHhhhcCCceEEEEEcCCCcchHHHHHHHHHHcCCceEEEec----------hHHH
Confidence 44578999 999888777763 33444554 666665 77776643 44567866665532 1222
Q ss_pred HHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeec
Q 015435 170 EDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFD 217 (407)
Q Consensus 170 ~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D 217 (407)
..+. +...+++=...----|.++++-=-..|+..|++.+..+++=
T Consensus 183 ~~~~---~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~ 227 (301)
T COG1184 183 AFMS---RVDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYVV 227 (301)
T ss_pred HHHH---hCCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEEE
Confidence 3333 23333331222222355555555567788899988766653
No 446
>TIGR03815 CpaE_hom_Actino helicase/secretion neighborhood CpaE-like protein. Members of this protein family belong to the MinD/ParA family of P-loop NTPases, and in particular show homology to the CpaE family of pilus assembly proteins (see PubMed:12370432). Nearly all members are found, not only in a gene context consistent with pilus biogenesis or a pilus-like secretion apparatus, but also near a DEAD/DEAH-box helicase, suggesting an involvement in DNA transfer activity. The model describes a clade restricted to the Actinobacteria.
Probab=44.05 E-value=2.6e+02 Score=25.74 Aligned_cols=134 Identities=17% Similarity=0.116 Sum_probs=69.0
Q ss_pred CCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhc-CCCeEEecC--CCCCChHHHHhhcCceee
Q 015435 75 VGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY-HQLTIYIPQ--PTWGNHPKVFTLAGLSVK 151 (407)
Q Consensus 75 ~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~-~gd~Vi~~~--p~y~~~~~~~~~~G~~~~ 151 (407)
....++.+.+.+...... -...-|.++...||.+.-.++..+...+. .|.+|++-+ |....... .+|.+..
T Consensus 73 ~~~~~l~~~l~~~~~~~~---~~~~vIav~~~KGGvGkTT~a~nLA~~la~~g~~VlLvD~D~~~~~~~~---~lg~~~~ 146 (322)
T TIGR03815 73 EAEGWLVELLADLDQSPP---ARGVVVAVIGGRGGAGASTLAAALALAAARHGLRTLLVDADPWGGGLDL---LLGAEDV 146 (322)
T ss_pred CCHHHHHHHHHhhccCCC---CCceEEEEEcCCCCCcHHHHHHHHHHHHHhcCCCEEEEecCCCCCCeee---eecCCCC
Confidence 345677777766531111 11234555556677776666554544443 677776654 44443211 2222110
Q ss_pred E-E---EeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccc
Q 015435 152 T-Y---RYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSA 219 (407)
Q Consensus 152 ~-v---~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~ 219 (407)
. + +. ......+|...+.+.+.. ...+ .+++.+..+ +.-++.+.++++.+..+++-=++|+|..
T Consensus 147 ~~~~~~~~-~~~~~~~~~~~l~~~~~~--~~~l-~vl~~~~~~-~~~~~~~~l~~~l~~l~~~~D~VIID~p 213 (322)
T TIGR03815 147 PGLRWPDL-SQARGRLPAGALRDALPR--RGGL-SVLSWGRAV-GAALPPAAVRAVLDAARRGGDLVVVDLP 213 (322)
T ss_pred CCcCHHHH-hhcCCCcCHHHHHHhCCC--cCCe-EEEecCCCC-cCCCCHHHHHHHHHHHHhcCCEEEEeCC
Confidence 0 0 00 011134566667666542 2233 333555443 3446778888888887765458899996
No 447
>PF04016 DUF364: Domain of unknown function (DUF364); InterPro: IPR007161 This is a entry represents of bacterial and archaeal proteins of unknown function.; PDB: 3L5O_B 3NPG_A.
Probab=43.71 E-value=44 Score=26.90 Aligned_cols=78 Identities=13% Similarity=0.060 Sum_probs=47.3
Q ss_pred hcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecC----CCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHH
Q 015435 123 HYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDP----ATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLE 198 (407)
Q Consensus 123 ~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~----~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~ 198 (407)
..+|++|.+--- +.+....++..+.++..++.+.+ ....+...+.++.+. ...++++ ||..+--.
T Consensus 8 ~~~~~~V~~VG~-f~P~~~~l~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~l~---~aD~vii-------TGsTlvN~ 76 (147)
T PF04016_consen 8 IGPGDKVGMVGY-FQPLVEKLKERGAEVRVFDLNPDNIGEEPGDVPDEDAEEILP---WADVVII-------TGSTLVNG 76 (147)
T ss_dssp TTTTSEEEEES---HCCHHHHCCCCSEEEEEESSGGG--SSCT-EEGGGHHHHGG---G-SEEEE-------ECHHCCTT
T ss_pred hcCCCEEEEEcC-cHHHHHHHhcCCCCEEEEECCCCCCCCCCCcCCHHHHHHHHc---cCCEEEE-------EeeeeecC
Confidence 457888877742 32466777777888888888531 222334455555554 5667777 34444445
Q ss_pred HHHHHHHHHHHcC
Q 015435 199 QWEQIRQLMRSKG 211 (407)
Q Consensus 199 ~l~~i~~~~~~~~ 211 (407)
-+.+|.+.|++..
T Consensus 77 Ti~~iL~~~~~~~ 89 (147)
T PF04016_consen 77 TIDDILELARNAR 89 (147)
T ss_dssp THHHHHHHTTTSS
T ss_pred CHHHHHHhCccCC
Confidence 5889999999433
No 448
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=43.58 E-value=1.9e+02 Score=23.94 Aligned_cols=81 Identities=10% Similarity=0.088 Sum_probs=51.7
Q ss_pred CCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecC-CCCCCCCCCCHHHHHHH
Q 015435 125 HQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHAC-AHNPTGVDPTLEQWEQI 203 (407)
Q Consensus 125 ~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~-p~NPtG~~~~~~~l~~i 203 (407)
.+.-|+...|-+..+...+...|++...+=.-......-.+..+++++.. ...-.++ +- |+ .++.+++++|
T Consensus 59 ~~Rwlv~IaPP~~~~~~~L~~~Gl~l~rvlli~~~~~~d~lwa~EQaLrS--G~c~aVL-~WLp~-----~l~~~~lRRL 130 (168)
T TIGR00623 59 QSRWQLWLTPQQKLSKEWVQSSGLPLTKVMQISQLSPCNTVESMIRALRT--GNYSVVI-GWLTD-----ELTEEEHAKL 130 (168)
T ss_pred cCceEEEECCCCccCHHHHHHcCCChhHEEEEecCCchhHHHHHHHHHHh--CCCcEEE-ecCCc-----cCCHHHHHHH
Confidence 56677777777778999999999977766332222222346778888873 3443344 22 32 2557899999
Q ss_pred HHHHHHcCce
Q 015435 204 RQLMRSKGLL 213 (407)
Q Consensus 204 ~~~~~~~~~~ 213 (407)
--.+++-+.+
T Consensus 131 qlAA~~G~al 140 (168)
T TIGR00623 131 VRAAEEGNAM 140 (168)
T ss_pred HHHHHhCCCe
Confidence 8777776533
No 449
>PRK14705 glycogen branching enzyme; Provisional
Probab=43.28 E-value=34 Score=37.75 Aligned_cols=36 Identities=14% Similarity=0.185 Sum_probs=30.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCceeeeccccccccC
Q 015435 190 PTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFAS 225 (407)
Q Consensus 190 PtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~ 225 (407)
|++..-++++++++++.|+++|+-||.|=++..+..
T Consensus 807 p~~ryGt~~dfk~lVd~~H~~GI~VILD~V~nH~~~ 842 (1224)
T PRK14705 807 PTSRFGHPDEFRFLVDSLHQAGIGVLLDWVPAHFPK 842 (1224)
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEeccccCCc
Confidence 344456799999999999999999999999987753
No 450
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=42.46 E-value=1.3e+02 Score=22.60 Aligned_cols=69 Identities=16% Similarity=0.222 Sum_probs=39.4
Q ss_pred CCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCcee
Q 015435 135 TWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLP 214 (407)
Q Consensus 135 ~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~l 214 (407)
.|..+.+.+.....+++.+-.. . ....+-+.+++. ...-+++ .-|.+. +.++.++|.++|+++|..+
T Consensus 50 ~~~~~~~ll~~~~~D~V~I~tp--~--~~h~~~~~~~l~---~g~~v~~----EKP~~~--~~~~~~~l~~~a~~~~~~~ 116 (120)
T PF01408_consen 50 VYTDLEELLADEDVDAVIIATP--P--SSHAEIAKKALE---AGKHVLV----EKPLAL--TLEEAEELVEAAKEKGVKV 116 (120)
T ss_dssp EESSHHHHHHHTTESEEEEESS--G--GGHHHHHHHHHH---TTSEEEE----ESSSSS--SHHHHHHHHHHHHHHTSCE
T ss_pred chhHHHHHHHhhcCCEEEEecC--C--cchHHHHHHHHH---cCCEEEE----EcCCcC--CHHHHHHHHHHHHHhCCEE
Confidence 3444556666555666666542 1 234455555555 2234455 233322 4788888888888888776
Q ss_pred ee
Q 015435 215 FF 216 (407)
Q Consensus 215 i~ 216 (407)
.+
T Consensus 117 ~V 118 (120)
T PF01408_consen 117 MV 118 (120)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 451
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=41.96 E-value=1.3e+02 Score=27.24 Aligned_cols=120 Identities=13% Similarity=-0.014 Sum_probs=59.5
Q ss_pred HHHHHHHHHHhCCCCCCCCCCceEEeecCCcccHHHHHHHHHHhhcCCC--eEEecC--CCCCCh--HHHHhhcCceeeE
Q 015435 79 DFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQL--TIYIPQ--PTWGNH--PKVFTLAGLSVKT 152 (407)
Q Consensus 79 ~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd--~Vi~~~--p~y~~~--~~~~~~~G~~~~~ 152 (407)
..++.+++..... ++....++ |.|-+..+..++ ......|. +|++.+ |.+.+. ...+...|+++..
T Consensus 92 ~~~~~I~~~~~~~----I~~~~~IL--T~~~S~~v~~~l--~~a~~~~~~~~V~v~es~P~~eG~~~a~~L~~~gi~v~~ 163 (282)
T PF01008_consen 92 QAREKIADHASEL----INDGDTIL--THGYSSTVERFL--LSAKKKGKKFRVIVLESRPYNEGRLMAKELAEAGIPVTL 163 (282)
T ss_dssp HHHHHHHHHHHCC----C-TTEEEE--EES--SHHHHHH--HHHHHTTEEEEEEEE--TTTTHHHTHHHHHHHTT-EEEE
T ss_pred HHHHHHHHHHHHh----ccCCeEEE--EeCCchHHHHHH--HHHHHcCCeEEEEEccCCcchhhhhHHHHhhhcceeEEE
Confidence 4455555555332 45578888 999988887773 33344443 566665 544432 2233456888777
Q ss_pred EEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeecc
Q 015435 153 YRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDS 218 (407)
Q Consensus 153 v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~ 218 (407)
++. ..+-..+.+ ....+++=...--+.|.++++.=-..++-.|+++++.+++=.
T Consensus 164 i~d----------~~~~~~m~~--~vd~VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~~ 217 (282)
T PF01008_consen 164 IPD----------SAVGYVMPR--DVDKVLIGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVLA 217 (282)
T ss_dssp E-G----------GGHHHHHHC--TESEEEEE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE-
T ss_pred Eec----------hHHHHHHHH--hCCeeEEeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEEc
Confidence 743 234444441 133333322222333444333334556667888987776653
No 452
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=41.75 E-value=2.8e+02 Score=25.37 Aligned_cols=101 Identities=14% Similarity=0.060 Sum_probs=50.4
Q ss_pred CceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCCh---HHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC
Q 015435 99 NRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNH---PKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA 175 (407)
Q Consensus 99 ~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~---~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 175 (407)
.++++ ..||..++.-++ .+...+.|-++++-+-.-.+. .+-++..| ++..+.++ - ...-++..+.+.+++.
T Consensus 38 g~~vL--ITGgg~GlGr~i-alefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cd-i-s~~eei~~~a~~Vk~e 111 (300)
T KOG1201|consen 38 GEIVL--ITGGGSGLGRLI-ALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCD-I-SDREEIYRLAKKVKKE 111 (300)
T ss_pred CCEEE--EeCCCchHHHHH-HHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEec-C-CCHHHHHHHHHHHHHh
Confidence 44555 445555554442 234455677776655333323 33333445 67777662 2 1222445555556544
Q ss_pred CCCcEEEEecCCCCCCCC---CCCHHHHHHHHHH
Q 015435 176 PSGAIVLLHACAHNPTGV---DPTLEQWEQIRQL 206 (407)
Q Consensus 176 ~~~~~v~i~~~p~NPtG~---~~~~~~l~~i~~~ 206 (407)
-+..-++| +|..=-++. -.+.+++++..++
T Consensus 112 ~G~V~ILV-NNAGI~~~~~ll~~~d~ei~k~~~v 144 (300)
T KOG1201|consen 112 VGDVDILV-NNAGIVTGKKLLDCSDEEIQKTFDV 144 (300)
T ss_pred cCCceEEE-eccccccCCCccCCCHHHHHHHHHH
Confidence 34455566 554333332 3567777776554
No 453
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=41.30 E-value=29 Score=32.24 Aligned_cols=74 Identities=11% Similarity=0.069 Sum_probs=41.8
Q ss_pred HHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCc-EEEE--ecCCCCCCCCCCCHHHHHHHHHHHHHcCceee
Q 015435 140 PKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGA-IVLL--HACAHNPTGVDPTLEQWEQIRQLMRSKGLLPF 215 (407)
Q Consensus 140 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~-~v~i--~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 215 (407)
.+.+...+++...+.+.| ++.+..+.....-......+ .+.- ......+.+-.++++++++|++.|+++|+-||
T Consensus 23 id~ma~~K~N~lhlHltD--~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~vI 99 (326)
T cd06564 23 IKTMSWYKMNDLQLHLND--NLIFNLDDMSTTVNNATYASDDVKSGNNYYNLTANDGYYTKEEFKELIAYAKDRGVNII 99 (326)
T ss_pred HHHHHHcCCceEEEeecC--CcccccCCCchhhhhhhhhccccccccccCCCCCCCCcccHHHHHHHHHHHHHcCCeEe
Confidence 345557788888888865 45444332221111000000 0000 01112345667999999999999999998887
No 454
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=41.07 E-value=71 Score=30.38 Aligned_cols=82 Identities=16% Similarity=0.112 Sum_probs=48.4
Q ss_pred EEecCCCCCChHH-HHhhcCceeeEEEeecCCCC-CcChhhHHHHHHcC-CCCcEEEEecCCCCCCCCCCCHHHHHHHHH
Q 015435 129 IYIPQPTWGNHPK-VFTLAGLSVKTYRYYDPATR-GLNFQGLLEDLRAA-PSGAIVLLHACAHNPTGVDPTLEQWEQIRQ 205 (407)
Q Consensus 129 Vi~~~p~y~~~~~-~~~~~G~~~~~v~~~~~~~~-~~d~~~l~~~i~~~-~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~ 205 (407)
=++.+++.+...+ -+-...-++.+++. ++.+ ..+...+.+.+.+. ++-.++++ +.. .-|++ ...+.+.+
T Consensus 94 ~l~~~~~r~T~~K~Rv~s~nQQllRvD~--Ee~~~~~~~~~ll~~~~~~l~~~~~vVL-SDY--~KG~L---~~~q~~I~ 165 (467)
T COG2870 94 DLLRDKNRPTIVKLRVLSRNQQLLRLDF--EEKFPIEDENKLLEKIKNALKSFDALVL-SDY--AKGVL---TNVQKMID 165 (467)
T ss_pred ceEeecCCCceeeeeeecccceEEEecc--cccCcchhHHHHHHHHHHHhhcCCEEEE-ecc--ccccc---hhHHHHHH
Confidence 3444454443322 12233446667766 3222 24556666666543 34556666 553 45663 34899999
Q ss_pred HHHHcCceeeecc
Q 015435 206 LMRSKGLLPFFDS 218 (407)
Q Consensus 206 ~~~~~~~~li~D~ 218 (407)
+|++.|+.+++|-
T Consensus 166 ~ar~~~~pVLvDP 178 (467)
T COG2870 166 LAREAGIPVLVDP 178 (467)
T ss_pred HHHHcCCcEEECC
Confidence 9999999999994
No 455
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=40.61 E-value=1.4e+02 Score=27.85 Aligned_cols=70 Identities=13% Similarity=0.079 Sum_probs=45.6
Q ss_pred CCeEEecCCCCC-ChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHH
Q 015435 126 QLTIYIPQPTWG-NHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIR 204 (407)
Q Consensus 126 gd~Vi~~~p~y~-~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~ 204 (407)
+.+|++-+.... +....+...|++++.||.+ .+++++.+ -+...+++.+-|.+|.-. ...+..|.
T Consensus 179 ~~~Vv~iD~GvK~nIlr~L~~rg~~vtVVP~~------t~~eeIl~-----~~pDGiflSNGPGDP~~~---~~~i~~ik 244 (368)
T COG0505 179 GKHVVVIDFGVKRNILRELVKRGCRVTVVPAD------TSAEEILA-----LNPDGIFLSNGPGDPAPL---DYAIETIK 244 (368)
T ss_pred CcEEEEEEcCccHHHHHHHHHCCCeEEEEcCC------CCHHHHHh-----hCCCEEEEeCCCCChhHH---HHHHHHHH
Confidence 446777766554 5566677889999999872 46676665 356788886778888544 34444444
Q ss_pred HHHHH
Q 015435 205 QLMRS 209 (407)
Q Consensus 205 ~~~~~ 209 (407)
++..+
T Consensus 245 ~l~~~ 249 (368)
T COG0505 245 ELLGT 249 (368)
T ss_pred HHhcc
Confidence 44443
No 456
>TIGR00190 thiC thiamine biosynthesis protein ThiC. The thiC ortholog is designated thiA in Bacillus subtilis.
Probab=40.24 E-value=2.2e+02 Score=27.13 Aligned_cols=157 Identities=15% Similarity=0.125 Sum_probs=83.0
Q ss_pred CCeeeeeeeeeecCCCccccchhHHHHHHHHhccccccccCCCCCCcHHHHHHHHHHHhCCCCCCCCCCceEEeecCCcc
Q 015435 31 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGT 110 (407)
Q Consensus 31 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~l~~~~a~~~~~~~~~~~~~~~i~~~~t~g~t 110 (407)
+..||.++|.. ++. ......++++..+.....+....-+.-..+.+.|+.+.+.. .+-+ ||
T Consensus 60 rtKVNaNIGtS--~~~-~d~~~E~~K~~~A~~~GADtiMDLStGgdl~~iR~~il~~s-----------~vpv-----GT 120 (423)
T TIGR00190 60 RTKVNANIGTS--ADT-SDIEEEVEKALIAIKYGADTVMDLSTGGDLDEIRKAILDAV-----------PVPV-----GT 120 (423)
T ss_pred eeEEEeeecCC--CCC-CCHHHHHHHHHHHHHcCCCeEeeccCCCCHHHHHHHHHHcC-----------CCCc-----cC
Confidence 56788888864 122 34556666665555422223333333345777787766543 2222 44
Q ss_pred cHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHh---hcCceeeEEEeecCCCCCcChhhHHHHHHcCCCC---------
Q 015435 111 GSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFT---LAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSG--------- 178 (407)
Q Consensus 111 ~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~---~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~--------- 178 (407)
-=++-+. .... ++ +.+.+..-+.+.++ .-|+....+.+ +++.+.++..-....-.
T Consensus 121 VPiYqa~--~~~~--~~---~~~mt~d~~~~~ie~qa~dGVDfmTiH~------Gi~~~~~~~~~~~~R~~giVSRGGs~ 187 (423)
T TIGR00190 121 VPIYQAA--EKVH--GA---VEDMDEDDMFRAIEKQAKDGVDFMTIHA------GVLLEYVERLKRSGRITGIVSRGGAI 187 (423)
T ss_pred ccHHHHH--HHhc--CC---hhhCCHHHHHHHHHHHHHhCCCEEEEcc------chhHHHHHHHHhCCCccCeecCcHHH
Confidence 4444431 1111 11 11112222333333 34777777765 46666666654321101
Q ss_pred -cEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeecccccccc
Q 015435 179 -AIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFA 224 (407)
Q Consensus 179 -~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~ 224 (407)
...++.+.-.||. -+...+|+++|++|++.|=.=+.....+
T Consensus 188 ~~~WM~~~~~ENPl-----ye~fD~lLeI~~~yDVtlSLGDglRPG~ 229 (423)
T TIGR00190 188 LAAWMLHHHKENPL-----YKNFDYILEIAKEYDVTLSLGDGLRPGC 229 (423)
T ss_pred HHHHHHHcCCcCch-----HHHHHHHHHHHHHhCeeeeccCCcCCCc
Confidence 1123445667887 7799999999999998876555554443
No 457
>COG1909 Uncharacterized protein conserved in archaea [Function unknown]
Probab=40.21 E-value=2.1e+02 Score=23.52 Aligned_cols=77 Identities=22% Similarity=0.278 Sum_probs=44.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcC-ceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCccccccCCCcceeE
Q 015435 188 HNPTGVDPTLEQWEQIRQLMRSKG-LLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALS 266 (407)
Q Consensus 188 ~NPtG~~~~~~~l~~i~~~~~~~~-~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 266 (407)
.||-|+ ++.+-++.|.+.+.... +.+.+|. +.|...+........+++++ ||.|+. |.+.
T Consensus 85 ~NpPGt-It~el~~ai~~a~~~~k~~~I~V~G----------EEDLa~lp~i~~ap~~tvV~------YGqP~~--GvV~ 145 (167)
T COG1909 85 RNPPGT-ITFELIKAIEKALEDGKRVRIFVDG----------EEDLAVLPAILYAPLGTVVL------YGQPDE--GVVA 145 (167)
T ss_pred eCCCcE-eEHHHHHHHHHHHhcCCcEEEEEeC----------hhHHHHhHHHhhcCCCCEEE------eCCCCC--cEEE
Confidence 688888 56888899988877653 5666665 12444444433333455555 456764 4442
Q ss_pred EeecChhhHHHHHHHHhh
Q 015435 267 IVCKTEDVASRVESQLKL 284 (407)
Q Consensus 267 ~v~~~~~~~~~~~~~~~~ 284 (407)
+--+++.+..+.+.++.
T Consensus 146 -l~V~~~~k~~v~~ll~k 162 (167)
T COG1909 146 -LRVTEELKEEVLELLAK 162 (167)
T ss_pred -EEecHHHHHHHHHHHHH
Confidence 34455655555554443
No 458
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=40.21 E-value=1.9e+02 Score=22.96 Aligned_cols=58 Identities=12% Similarity=0.133 Sum_probs=36.4
Q ss_pred HHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC
Q 015435 141 KVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKG 211 (407)
Q Consensus 141 ~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~ 211 (407)
..++..|.+++++-. ...++++.+++.+. +..++.+ +.-.+.+ ...++++.+.+++.+
T Consensus 25 ~~lr~~G~eVi~LG~------~vp~e~i~~~a~~~-~~d~V~l-S~~~~~~-----~~~~~~~~~~L~~~~ 82 (137)
T PRK02261 25 RALTEAGFEVINLGV------MTSQEEFIDAAIET-DADAILV-SSLYGHG-----EIDCRGLREKCIEAG 82 (137)
T ss_pred HHHHHCCCEEEECCC------CCCHHHHHHHHHHc-CCCEEEE-cCccccC-----HHHHHHHHHHHHhcC
Confidence 355678888877733 36778888877632 3445555 4433322 567788888888763
No 459
>PLN02565 cysteine synthase
Probab=40.10 E-value=2.2e+02 Score=26.44 Aligned_cols=51 Identities=14% Similarity=0.092 Sum_probs=34.2
Q ss_pred eEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEE
Q 015435 101 VTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYR 154 (407)
Q Consensus 101 i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~ 154 (407)
|+- .++|+.+..++. ..+.+.-.-.|++|.-.-..-...++.+|++++.++
T Consensus 70 vv~--aSsGN~g~alA~-~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~ 120 (322)
T PLN02565 70 LIE--PTSGNTGIGLAF-MAAAKGYKLIITMPASMSLERRIILLAFGAELVLTD 120 (322)
T ss_pred EEE--ECCChHHHHHHH-HHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeC
Confidence 666 888899988884 222222223455665555566778889999998874
No 460
>PRK09354 recA recombinase A; Provisional
Probab=39.90 E-value=2.4e+02 Score=26.52 Aligned_cols=121 Identities=9% Similarity=0.069 Sum_probs=61.3
Q ss_pred CceEEeecCCcccHHHHHHHHHHhh-cCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCC
Q 015435 99 NRVTTVQCLSGTGSLRVGAEFLARH-YHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPS 177 (407)
Q Consensus 99 ~~i~~~~t~g~t~a~~~~~~~~~~~-~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 177 (407)
..+..+..+.|++=..++..++... ..|..++..+..+......++..|.++..+-+..+....--.+.++..+.+ ..
T Consensus 60 G~IteI~G~~GsGKTtLal~~~~~~~~~G~~~~yId~E~s~~~~~a~~lGvdld~lli~qp~~~Eq~l~i~~~li~s-~~ 138 (349)
T PRK09354 60 GRIVEIYGPESSGKTTLALHAIAEAQKAGGTAAFIDAEHALDPVYAKKLGVDIDNLLVSQPDTGEQALEIADTLVRS-GA 138 (349)
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHcCCCHHHeEEecCCCHHHHHHHHHHHhhc-CC
Confidence 4555543666666666655444333 467777777776666666777778765555443232111112222233331 23
Q ss_pred CcEEEEecCCCCCC------CCCC-----CH-----HHHHHHHHHHHHcCceeee-ccccc
Q 015435 178 GAIVLLHACAHNPT------GVDP-----TL-----EQWEQIRQLMRSKGLLPFF-DSAYQ 221 (407)
Q Consensus 178 ~~~v~i~~~p~NPt------G~~~-----~~-----~~l~~i~~~~~~~~~~li~-D~~y~ 221 (407)
..+|+| .+...-. |..- .. ..+.+|..+++++|+.+|+ ..++.
T Consensus 139 ~~lIVI-DSvaaL~~~~E~eg~~gd~~~~~qar~ms~~Lr~L~~~l~k~~itvI~tNQvr~ 198 (349)
T PRK09354 139 VDLIVV-DSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNISKSNTTVIFINQIRE 198 (349)
T ss_pred CCEEEE-eChhhhcchhhhcCCccccchhHHHHHHHHHHHHHHHHHHHcCcEEEEEEeeee
Confidence 455555 3322111 1100 01 1267788888899866555 33433
No 461
>PRK10595 SOS cell division inhibitor; Provisional
Probab=39.90 E-value=2.1e+02 Score=23.53 Aligned_cols=81 Identities=11% Similarity=0.087 Sum_probs=51.4
Q ss_pred CCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecC-CCCCCCCCCCHHHHHHH
Q 015435 125 HQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHAC-AHNPTGVDPTLEQWEQI 203 (407)
Q Consensus 125 ~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~-p~NPtG~~~~~~~l~~i 203 (407)
.+.-|+...|-+..+...+...|+....+=.-......-.+..+++++. .....+++ .- |+ -++.+++++|
T Consensus 55 ~~rwilwI~PP~~p~~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLr--sG~~~aVL-~Wlp~-----~l~~~~~RRL 126 (164)
T PRK10595 55 QSRWQLWLTPQQKLSREWLQASGLPLTKVMQLSQLSPCHTVEAMERALR--TGNYSVVL-GWLPD-----ELTEEEHARL 126 (164)
T ss_pred cCceEEEECCCCCCCHHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHh--hCCCcEEE-ECCcc-----cCCHHHHHHH
Confidence 5667888888899999999999997666543222211223456667776 33333333 22 22 2458899999
Q ss_pred HHHHHHcCce
Q 015435 204 RQLMRSKGLL 213 (407)
Q Consensus 204 ~~~~~~~~~~ 213 (407)
--.|++-+.+
T Consensus 127 QlAAe~g~~l 136 (164)
T PRK10595 127 VDAAQEGNAM 136 (164)
T ss_pred HHHHHhCCCE
Confidence 8888776643
No 462
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=39.84 E-value=3e+02 Score=25.25 Aligned_cols=109 Identities=13% Similarity=0.037 Sum_probs=66.8
Q ss_pred CceEEeecCCcccHHHHHHHHHHhhcCC-CeEEec-CCC--CCChHH--HHhhcCceeeEEEeecCCCCCcChhhHHHHH
Q 015435 99 NRVTTVQCLSGTGSLRVGAEFLARHYHQ-LTIYIP-QPT--WGNHPK--VFTLAGLSVKTYRYYDPATRGLNFQGLLEDL 172 (407)
Q Consensus 99 ~~i~~~~t~g~t~a~~~~~~~~~~~~~g-d~Vi~~-~p~--y~~~~~--~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i 172 (407)
..-++ |-|+.+++.+-......-.-| +.|++. .+. |..... .....|..++.++...+..-....+.+.+.+
T Consensus 64 ~dTlv--T~GgiQSNh~r~tAavA~~lGl~~v~ile~~~~~y~~ngn~Ll~~l~G~~~~~~~~~~d~~~~~~~~~~~e~~ 141 (323)
T COG2515 64 ADTLV--TYGGIQSNHVRQTAAVAAKLGLKCVLILENIEANYLLNGNLLLSKLMGAEVRAVDAGTDIGINASAEELAEEV 141 (323)
T ss_pred CcEEE--EecccchhHHHHHHHHHHhcCCcEEEEEeccccccccccchhhhhhcCceEEEecCCCChhhchhhHHHHHHH
Confidence 45677 999999998864222222233 444433 333 433323 3347788888886522111134567777777
Q ss_pred HcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc
Q 015435 173 RAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSK 210 (407)
Q Consensus 173 ~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~ 210 (407)
.+..+++.++. .-..||-|..--..-..+|.+.++++
T Consensus 142 ~~~g~kpyvIp-~GG~~~~g~lGyv~~a~Ei~~Q~~~~ 178 (323)
T COG2515 142 RKQGGKPYVIP-EGGSSPLGALGYVRLALEIAEQAEQL 178 (323)
T ss_pred HhcCCCCcEec-cCCcCccccccHHHHHHHHHHHHhhc
Confidence 75566777776 44489988876677788888888764
No 463
>PF12138 Spherulin4: Spherulation-specific family 4; InterPro: IPR021986 This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.
Probab=39.75 E-value=1.6e+02 Score=26.20 Aligned_cols=57 Identities=16% Similarity=0.261 Sum_probs=39.3
Q ss_pred cChhhHHHHHHcCCCCcEEEEecCCCCCCCCC----CCHHHHHHHHHHHHHcCceee--ecccc
Q 015435 163 LNFQGLLEDLRAAPSGAIVLLHACAHNPTGVD----PTLEQWEQIRQLMRSKGLLPF--FDSAY 220 (407)
Q Consensus 163 ~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~----~~~~~l~~i~~~~~~~~~~li--~D~~y 220 (407)
-.++.|.+++...+.....+| .||+|.-|.. ...+....|.++-+..|+.+| ++-.|
T Consensus 16 ~~W~~l~~a~~~~p~~~f~vI-iNP~sGPG~~~~~~pd~~Y~~~i~~L~~~~nv~vlGYV~T~Y 78 (253)
T PF12138_consen 16 AAWDPLYDAIAAHPSVPFTVI-INPNSGPGSAPDPWPDANYAAAIPRLNSYANVRVLGYVHTSY 78 (253)
T ss_pred cchHHHHHHHhcCCCCcEEEE-EcCCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcEEEEEEccc
Confidence 357889888887666666566 6888888876 777777888777555565544 44444
No 464
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=39.44 E-value=1.8e+02 Score=22.40 Aligned_cols=57 Identities=14% Similarity=0.179 Sum_probs=35.3
Q ss_pred HHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC
Q 015435 142 VFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKG 211 (407)
Q Consensus 142 ~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~ 211 (407)
.++..|.+++.... ...++++.+.+.+. +..++.+ +.-.+. ..+.++++++.+++.+
T Consensus 22 ~l~~~G~~vi~lG~------~vp~e~~~~~a~~~-~~d~V~i-S~~~~~-----~~~~~~~~~~~L~~~~ 78 (122)
T cd02071 22 ALRDAGFEVIYTGL------RQTPEEIVEAAIQE-DVDVIGL-SSLSGG-----HMTLFPEVIELLRELG 78 (122)
T ss_pred HHHHCCCEEEECCC------CCCHHHHHHHHHHc-CCCEEEE-cccchh-----hHHHHHHHHHHHHhcC
Confidence 46678888877733 25667777776632 3344444 443321 2667888888888874
No 465
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=39.41 E-value=3.7e+02 Score=26.14 Aligned_cols=115 Identities=8% Similarity=0.081 Sum_probs=51.2
Q ss_pred ceEEeecCCcccHHHHHHHHHHhhc-CCCeEEec--CCCCCChHHHHhhcCceeeEEEeecCCCCCcChhh-----HHHH
Q 015435 100 RVTTVQCLSGTGSLRVGAEFLARHY-HQLTIYIP--QPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQG-----LLED 171 (407)
Q Consensus 100 ~i~~~~t~g~t~a~~~~~~~~~~~~-~gd~Vi~~--~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~-----l~~~ 171 (407)
.++.+....|++=...+.++...+. .|.+|.+. ++.-+.....++.++-. ..+|+. .....-|+.. ++.+
T Consensus 101 ~vi~lvG~~GvGKTTtaaKLA~~l~~~G~kV~lV~~D~~R~aA~eQLk~~a~~-~~vp~~-~~~~~~dp~~i~~~~l~~~ 178 (429)
T TIGR01425 101 NVIMFVGLQGSGKTTTCTKLAYYYQRKGFKPCLVCADTFRAGAFDQLKQNATK-ARIPFY-GSYTESDPVKIASEGVEKF 178 (429)
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEcCcccchhHHHHHHHHhhc-cCCeEE-eecCCCCHHHHHHHHHHHH
Confidence 4555446666665555555554443 56665544 33333333343322222 223332 1111234422 3332
Q ss_pred HHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccc
Q 015435 172 LRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSA 219 (407)
Q Consensus 172 i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~ 219 (407)
-. .....|+|-+.+.++.-.- -.+++.++.+.++-..+++++|..
T Consensus 179 ~~--~~~DvViIDTaGr~~~d~~-lm~El~~i~~~~~p~e~lLVlda~ 223 (429)
T TIGR01425 179 KK--ENFDIIIVDTSGRHKQEDS-LFEEMLQVAEAIQPDNIIFVMDGS 223 (429)
T ss_pred Hh--CCCCEEEEECCCCCcchHH-HHHHHHHHhhhcCCcEEEEEeccc
Confidence 22 3467777743332222100 023444444444445688999975
No 466
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=39.24 E-value=2.2e+02 Score=24.84 Aligned_cols=96 Identities=16% Similarity=0.065 Sum_probs=56.7
Q ss_pred cCCcccHHHHHHHHHHhhcCCCeE--EecCCC----CC-------ChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHH
Q 015435 106 CLSGTGSLRVGAEFLARHYHQLTI--YIPQPT----WG-------NHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDL 172 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~~gd~V--i~~~p~----y~-------~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i 172 (407)
.+||..+..++..+... .+.+ ++..|. |. -....++..|+..+.+... ....-..+++.+.+
T Consensus 7 ~SGGKDS~lAl~~~~~~---~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~--~~~e~~~~~l~~~l 81 (222)
T TIGR00289 7 YSGGKDSILALYKALEE---HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTS--GEEEKEVEDLAGQL 81 (222)
T ss_pred ecCcHHHHHHHHHHHHc---CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcC--CchhHHHHHHHHHH
Confidence 78998888887544432 3432 221221 11 1123455778888777652 22233455666656
Q ss_pred HcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceee
Q 015435 173 RAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPF 215 (407)
Q Consensus 173 ~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 215 (407)
.+. ..-.++ +|-+.+......+-++|.+-|+..+
T Consensus 82 ~~~--gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~~~ 115 (222)
T TIGR00289 82 GEL--DVEALC-------IGAIESNYQKSRIDKVCRELGLKSI 115 (222)
T ss_pred HHc--CCCEEE-------ECccccHHHHHHHHHHHHHcCCEEe
Confidence 522 222233 5889999999999999999997665
No 467
>PF00154 RecA: recA bacterial DNA recombination protein; InterPro: IPR013765 The recA gene product is a multifunctional enzyme that plays a role in homologous recombination, DNA repair and induction of the SOS response []. In homologous recombination, the protein functions as a DNA-dependent ATPase, promoting synapsis, heteroduplex formation and strand exchange between homologous DNAs []. RecA also acts as a protease cofactor that promotes autodigestion of the lexA product and phage repressors. The proteolytic inactivation of the lexA repressor by an activated form of recA may cause a derepression of the 20 or so genes involved in the SOS response, which regulates DNA repair, induced mutagenesis, delayed cell division and prophage induction in response to DNA damage []. RecA is a protein of about 350 amino-acid residues. Its sequence is very well conserved [, , ] among eubacterial species. It is also found in the chloroplast of plants []. RecA-like proteins are found in archaea and diverse eukaryotic organisms, like fission yeast, mouse or human. In the filament visualised by X-ray crystallography, beta-strand 3, the loop C-terminal to beta-strand 2, and alpha-helix D of the core domain form one surface that packs against alpha-helix A and beta-strand 0 (the N-terminal domain) of an adjacent monomer during polymerisation []. The core ATP-binding site domain is well conserved, with 14 invariant residues. It contains the nucleotide binding loop between beta-strand 1 and alpha-helix C. The Escherichia coli sequence GPESSGKT matches the consensus sequence of amino acids (G/A)XXXXGK(T/S) for the Walker A box (also referred to as the P-loop) found in a number of nucleoside triphosphate (NTP)-binding proteins. Another nucleotide binding motif, the Walker B box is found at beta-strand 4 in the RecA structure. The Walker B box is characterised by four hydrophobic amino acids followed by an acidic residue (usually aspartate). Nucleotide specificity and additional ATP binding interactions are contributed by the amino acid residues at beta-strand 2 and the loop C-terminal to that strand, all of which are greater than 90% conserved among bacterial RecA proteins.; GO: 0003697 single-stranded DNA binding, 0005524 ATP binding, 0006281 DNA repair; PDB: 2IN0_A 1MO3_A 3IFJ_A 2IN8_A 2IMZ_B 1G18_A 1MO4_A 3IGD_A 2L8L_A 2IN9_A ....
Probab=38.37 E-value=1.8e+02 Score=27.05 Aligned_cols=85 Identities=11% Similarity=0.089 Sum_probs=42.4
Q ss_pred CceEEeecCCcccHHHHHHHHHHhhc-CCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCC
Q 015435 99 NRVTTVQCLSGTGSLRVGAEFLARHY-HQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPS 177 (407)
Q Consensus 99 ~~i~~~~t~g~t~a~~~~~~~~~~~~-~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 177 (407)
..|+-+..+.+++-..+++.++..++ .|..++..++.+.-....++..|+++..+=+..|+...--++.++..+.. ..
T Consensus 53 G~ivEi~G~~ssGKttLaL~~ia~~q~~g~~~a~ID~e~~ld~~~a~~lGvdl~rllv~~P~~~E~al~~~e~lirs-g~ 131 (322)
T PF00154_consen 53 GRIVEIYGPESSGKTTLALHAIAEAQKQGGICAFIDAEHALDPEYAESLGVDLDRLLVVQPDTGEQALWIAEQLIRS-GA 131 (322)
T ss_dssp TSEEEEEESTTSSHHHHHHHHHHHHHHTT-EEEEEESSS---HHHHHHTT--GGGEEEEE-SSHHHHHHHHHHHHHT-TS
T ss_pred CceEEEeCCCCCchhhhHHHHHHhhhcccceeEEecCcccchhhHHHhcCccccceEEecCCcHHHHHHHHHHHhhc-cc
Confidence 44433335556666666655555443 67777777877777778888888866554443333222223334444442 33
Q ss_pred CcEEEEe
Q 015435 178 GAIVLLH 184 (407)
Q Consensus 178 ~~~v~i~ 184 (407)
..++++-
T Consensus 132 ~~lVVvD 138 (322)
T PF00154_consen 132 VDLVVVD 138 (322)
T ss_dssp ESEEEEE
T ss_pred ccEEEEe
Confidence 4566663
No 468
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=38.35 E-value=2.4e+02 Score=24.83 Aligned_cols=75 Identities=17% Similarity=0.164 Sum_probs=51.7
Q ss_pred hHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeecc
Q 015435 139 HPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDS 218 (407)
Q Consensus 139 ~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~ 218 (407)
|.+++...|.+-+.|+- .-+|-+...+|..++.+. +-++..-+ | .+-+..|.+++++|++-+++-.
T Consensus 93 y~DILD~K~L~eIVVn~--RIdWL~HfSALLSAvGE~-NVpLA~~V----N-------I~GvHNil~vAa~~kL~iFVPS 158 (366)
T KOG2774|consen 93 YLDILDQKSLEEIVVNK--RIDWLVHFSALLSAVGET-NVPLALQV----N-------IRGVHNILQVAAKHKLKVFVPS 158 (366)
T ss_pred hhhhhccccHHHhhccc--ccceeeeHHHHHHHhccc-CCceeeee----c-------chhhhHHHHHHHHcCeeEeecc
Confidence 45666666665555544 335677889999988753 34444432 3 3346788999999999999999
Q ss_pred ccccccCCC
Q 015435 219 AYQGFASGS 227 (407)
Q Consensus 219 ~y~~~~~~~ 227 (407)
....|+.+.
T Consensus 159 TIGAFGPtS 167 (366)
T KOG2774|consen 159 TIGAFGPTS 167 (366)
T ss_pred cccccCCCC
Confidence 888887654
No 469
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=38.07 E-value=1.5e+02 Score=23.20 Aligned_cols=59 Identities=15% Similarity=0.173 Sum_probs=38.7
Q ss_pred HHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 015435 141 KVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGL 212 (407)
Q Consensus 141 ~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~ 212 (407)
..++.+|++++.+-. ...++++.++..+. +..++.+ ++-...| ...++++.+.++++|+
T Consensus 21 ~~L~~~GfeVidLG~------~v~~e~~v~aa~~~-~adiVgl-S~L~t~~-----~~~~~~~~~~l~~~gl 79 (128)
T cd02072 21 HAFTEAGFNVVNLGV------LSPQEEFIDAAIET-DADAILV-SSLYGHG-----EIDCKGLREKCDEAGL 79 (128)
T ss_pred HHHHHCCCEEEECCC------CCCHHHHHHHHHHc-CCCEEEE-eccccCC-----HHHHHHHHHHHHHCCC
Confidence 366788999988754 25677777776632 3445555 4433222 5678899999998874
No 470
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=37.86 E-value=1.1e+02 Score=23.09 Aligned_cols=66 Identities=17% Similarity=0.250 Sum_probs=42.0
Q ss_pred HHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc--Cceeeecc
Q 015435 141 KVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSK--GLLPFFDS 218 (407)
Q Consensus 141 ~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~--~~~li~D~ 218 (407)
..++..|.++..++.+ .+.+++.+.+.+. +..++.+ +... ..+.....++++..++. ++.+++=.
T Consensus 22 ~~l~~~G~~v~~~d~~------~~~~~l~~~~~~~-~pd~V~i-S~~~-----~~~~~~~~~l~~~~k~~~p~~~iv~GG 88 (121)
T PF02310_consen 22 AYLRKAGHEVDILDAN------VPPEELVEALRAE-RPDVVGI-SVSM-----TPNLPEAKRLARAIKERNPNIPIVVGG 88 (121)
T ss_dssp HHHHHTTBEEEEEESS------B-HHHHHHHHHHT-TCSEEEE-EESS-----STHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred HHHHHCCCeEEEECCC------CCHHHHHHHHhcC-CCcEEEE-EccC-----cCcHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 3556779988888552 3558888877643 4455566 3222 22367888888888876 67777555
Q ss_pred c
Q 015435 219 A 219 (407)
Q Consensus 219 ~ 219 (407)
.
T Consensus 89 ~ 89 (121)
T PF02310_consen 89 P 89 (121)
T ss_dssp S
T ss_pred C
Confidence 4
No 471
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=37.36 E-value=1.8e+02 Score=22.00 Aligned_cols=58 Identities=10% Similarity=0.180 Sum_probs=35.6
Q ss_pred HHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC
Q 015435 141 KVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKG 211 (407)
Q Consensus 141 ~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~ 211 (407)
..++..|.+++.+. ..+.++++.+.+.+. +..++.+ +.-.. .......++++.+++.+
T Consensus 21 ~~l~~~G~~V~~lg------~~~~~~~l~~~~~~~-~pdvV~i-S~~~~-----~~~~~~~~~i~~l~~~~ 78 (119)
T cd02067 21 RALRDAGFEVIDLG------VDVPPEEIVEAAKEE-DADAIGL-SGLLT-----THMTLMKEVIEELKEAG 78 (119)
T ss_pred HHHHHCCCEEEECC------CCCCHHHHHHHHHHc-CCCEEEE-ecccc-----ccHHHHHHHHHHHHHcC
Confidence 35567888885553 236778888877633 3344444 33211 12567888888888874
No 472
>PLN00191 enolase
Probab=37.32 E-value=2.7e+02 Score=27.30 Aligned_cols=100 Identities=10% Similarity=0.013 Sum_probs=58.3
Q ss_pred CcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCC
Q 015435 108 SGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACA 187 (407)
Q Consensus 108 g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p 187 (407)
++.+++.... ....+-+-+.+.+|....-...+...-.+ ..+|+--++....+++.+++.+... -...+.+ -
T Consensus 296 s~~e~i~~~~---~L~~~y~I~~IEDPl~~~D~eg~~~Lt~~-~~ipIvgDE~~vtn~~~l~~~I~~~-aad~i~i--K- 367 (457)
T PLN00191 296 SGDELIDLYK---EFVSDYPIVSIEDPFDQDDWEHWAKLTSL-EDVQIVGDDLLVTNPKRVAKAIQEK-ACNALLL--K- 367 (457)
T ss_pred CHHHHHHHHH---HHhhcCCcEEEECCCCcccHHHHHHHHcc-CCCcEEccCcccCCHHHHHHHHHhC-CCCEEEe--c-
Confidence 3344444442 22333456788999865433333322111 3344433444456799999988732 2334444 2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCceeeecc
Q 015435 188 HNPTGVDPTLEQWEQIRQLMRSKGLLPFFDS 218 (407)
Q Consensus 188 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~ 218 (407)
.|-.|. ..+..+++++|+++|+.+++-.
T Consensus 368 l~qiGG---ITea~~~a~lA~~~G~~~~ish 395 (457)
T PLN00191 368 VNQIGT---VTESIEAVKMSKAAGWGVMTSH 395 (457)
T ss_pred ccccCC---HHHHHHHHHHHHHCCCEEEeCC
Confidence 334555 6789999999999998887643
No 473
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=37.25 E-value=2.1e+02 Score=24.85 Aligned_cols=70 Identities=24% Similarity=0.250 Sum_probs=47.8
Q ss_pred HHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCC---CCCCCCHHHHHHHHHHHHHcCceee
Q 015435 140 PKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNP---TGVDPTLEQWEQIRQLMRSKGLLPF 215 (407)
Q Consensus 140 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NP---tG~~~~~~~l~~i~~~~~~~~~~li 215 (407)
...++.+|+++. -| -|+.|++++.+.+-+..-..+|+-+....=+ .|..++.+.++++..++++||+-+.
T Consensus 105 e~lc~~lGl~~~-~P-----LWg~d~~ell~e~~~~Gf~~~Iv~Vsa~gL~~~~lGr~i~~~~~e~l~~l~~~ygi~~~ 177 (223)
T COG2102 105 ERLCEELGLKVY-AP-----LWGRDPEELLEEMVEAGFEAIIVAVSAEGLDESWLGRRIDREFLEELKSLNRRYGIHPA 177 (223)
T ss_pred HHHHHHhCCEEe-ec-----ccCCCHHHHHHHHHHcCCeEEEEEEeccCCChHHhCCccCHHHHHHHHHHHHhcCCCcc
Confidence 456678887763 22 4789999998877643333444433333333 5888999999999999999986443
No 474
>PRK14723 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=37.06 E-value=4.8e+02 Score=27.56 Aligned_cols=112 Identities=16% Similarity=0.154 Sum_probs=58.5
Q ss_pred CceEEeecCCcccHHHHHHHHHHhh--cCC-CeEEecC-CCCC-ChHHHHh----hcCceeeEEEeecCCCCCcChhhHH
Q 015435 99 NRVTTVQCLSGTGSLRVGAEFLARH--YHQ-LTIYIPQ-PTWG-NHPKVFT----LAGLSVKTYRYYDPATRGLNFQGLL 169 (407)
Q Consensus 99 ~~i~~~~t~g~t~a~~~~~~~~~~~--~~g-d~Vi~~~-p~y~-~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~ 169 (407)
..|+.+..++|.+=...+.++...+ ..| ++|.+.. -.|- +....++ ..|+.+..+ .+++++.
T Consensus 185 g~Vi~lVGpnGvGKTTTiaKLA~~~~~~~G~kkV~lit~Dt~RigA~eQL~~~a~~~gvpv~~~---------~~~~~l~ 255 (767)
T PRK14723 185 GGVLALVGPTGVGKTTTTAKLAARCVAREGADQLALLTTDSFRIGALEQLRIYGRILGVPVHAV---------KDAADLR 255 (767)
T ss_pred CeEEEEECCCCCcHHHHHHHHHhhHHHHcCCCeEEEecCcccchHHHHHHHHHHHhCCCCcccc---------CCHHHHH
Confidence 4566655777777766666666544 345 4664433 2332 2333333 344333211 2677788
Q ss_pred HHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeecccc
Q 015435 170 EDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAY 220 (407)
Q Consensus 170 ~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y 220 (407)
+.+.+......|+|-..+-++.-.- -.+++..+.+.......+|++|..+
T Consensus 256 ~al~~~~~~D~VLIDTAGRs~~d~~-l~eel~~l~~~~~p~e~~LVLsAt~ 305 (767)
T PRK14723 256 FALAALGDKHLVLIDTVGMSQRDRN-VSEQIAMLCGVGRPVRRLLLLNAAS 305 (767)
T ss_pred HHHHHhcCCCEEEEeCCCCCccCHH-HHHHHHHHhccCCCCeEEEEECCCC
Confidence 8877655667778843333332110 0223333333333456888988874
No 475
>cd06449 ACCD Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.
Probab=36.80 E-value=2.5e+02 Score=25.70 Aligned_cols=17 Identities=12% Similarity=0.092 Sum_probs=13.7
Q ss_pred hHHHHhhcCceeeEEEe
Q 015435 139 HPKVFTLAGLSVKTYRY 155 (407)
Q Consensus 139 ~~~~~~~~G~~~~~v~~ 155 (407)
....++.+|++++.++-
T Consensus 100 ~~~~~~~~Ga~v~~~~~ 116 (307)
T cd06449 100 NILLSRIMGADVRLVSA 116 (307)
T ss_pred cHHHHHHCCCEEEEECC
Confidence 46677899999998864
No 476
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=36.61 E-value=1.5e+02 Score=23.40 Aligned_cols=60 Identities=18% Similarity=0.196 Sum_probs=39.9
Q ss_pred HHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 015435 140 PKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGL 212 (407)
Q Consensus 140 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~ 212 (407)
...++.+|++++.+.. ...++++.++..+. +..++.+ +.-. |.. ...++++.+.+++.|+
T Consensus 22 ~~~l~~~GfeVi~LG~------~v~~e~~v~aa~~~-~adiVgl-S~l~---~~~--~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 22 DHAFTNAGFNVVNLGV------LSPQEEFIKAAIET-KADAILV-SSLY---GHG--EIDCKGLRQKCDEAGL 81 (134)
T ss_pred HHHHHHCCCEEEECCC------CCCHHHHHHHHHHc-CCCEEEE-eccc---ccC--HHHHHHHHHHHHHCCC
Confidence 3466789999988754 25778888777633 3445555 4433 221 5578999999999875
No 477
>PRK07476 eutB threonine dehydratase; Provisional
Probab=36.19 E-value=3.5e+02 Score=24.96 Aligned_cols=51 Identities=16% Similarity=0.074 Sum_probs=33.1
Q ss_pred eEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEE
Q 015435 101 VTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYR 154 (407)
Q Consensus 101 i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~ 154 (407)
|+. .++|+.+..++. ..+.+.-.-.|+++...-......++.+|++++.++
T Consensus 70 vv~--aSsGN~g~alA~-~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~ 120 (322)
T PRK07476 70 VVT--ASTGNHGRALAY-AARALGIRATICMSRLVPANKVDAIRALGAEVRIVG 120 (322)
T ss_pred EEE--ECCChHHHHHHH-HHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEEC
Confidence 766 888888888874 222222223455555444456677889999998885
No 478
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=36.13 E-value=1.7e+02 Score=22.34 Aligned_cols=70 Identities=11% Similarity=0.085 Sum_probs=39.1
Q ss_pred hHHHHhh-cCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeee
Q 015435 139 HPKVFTL-AGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFF 216 (407)
Q Consensus 139 ~~~~~~~-~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 216 (407)
....++. .|..+..++. .+.++. ..+.+.+. ....-++| +.|+ |-|.-....+-..|...|.++++.++.
T Consensus 36 Ta~~L~~~~Gi~v~~vk~-~~~~g~---~~i~~~i~--~g~i~~VI-nt~~-~~~~~~~~~dg~~iRr~a~~~~Ip~~T 106 (115)
T cd01422 36 TGLLIQEATGLTVNRMKS-GPLGGD---QQIGALIA--EGEIDAVI-FFRD-PLTAQPHEPDVKALLRLCDVYNIPLAT 106 (115)
T ss_pred HHHHHHHhhCCcEEEEec-CCCCch---hHHHHHHH--cCceeEEE-EcCC-CCCCCcccccHHHHHHHHHHcCCCEEE
Confidence 3444555 7888887743 122222 34666665 23333333 3332 223332245788999999999988764
No 479
>PRK12568 glycogen branching enzyme; Provisional
Probab=36.09 E-value=50 Score=34.30 Aligned_cols=33 Identities=12% Similarity=0.163 Sum_probs=28.8
Q ss_pred CCCHHHHHHHHHHHHHcCceeeeccccccccCC
Q 015435 194 DPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASG 226 (407)
Q Consensus 194 ~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~ 226 (407)
.-++++++++++.|+++|+-||.|-++..+..+
T Consensus 315 ~G~~~dfk~lV~~~H~~Gi~VIlD~V~nH~~~d 347 (730)
T PRK12568 315 HGSPDGFAQFVDACHRAGIGVILDWVSAHFPDD 347 (730)
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeccccCCcc
Confidence 356889999999999999999999998877643
No 480
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=36.05 E-value=1.2e+02 Score=27.84 Aligned_cols=74 Identities=12% Similarity=-0.015 Sum_probs=42.8
Q ss_pred cCCCCCChHHHHhh--cCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHH
Q 015435 132 PQPTWGNHPKVFTL--AGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRS 209 (407)
Q Consensus 132 ~~p~y~~~~~~~~~--~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~ 209 (407)
--|+|....++.+. ...-++.+|- ..-++.++++.. ...+.++|++..-..+| ..+.+.++|++
T Consensus 54 G~~~y~sv~dlp~~~~~DlAvI~vPa------~~v~~al~e~~~--~Gvk~~vIisaGf~e~g------~~~~~~~~ar~ 119 (300)
T PLN00125 54 GLPVFNTVAEAKAETKANASVIYVPP------PFAAAAILEAME--AELDLVVCITEGIPQHD------MVRVKAALNRQ 119 (300)
T ss_pred CeeccCCHHHHhhccCCCEEEEecCH------HHHHHHHHHHHH--cCCCEEEEECCCCCccc------HHHHHHHHHhh
Confidence 44677777766654 3444444443 124566777666 45666666444333333 34555567999
Q ss_pred cCceeeeccc
Q 015435 210 KGLLPFFDSA 219 (407)
Q Consensus 210 ~~~~li~D~~ 219 (407)
+|+.++==.+
T Consensus 120 ~girviGPNc 129 (300)
T PLN00125 120 SKTRLIGPNC 129 (300)
T ss_pred cCCEEECCCC
Confidence 9998885554
No 481
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=36.00 E-value=2.8e+02 Score=24.16 Aligned_cols=96 Identities=18% Similarity=0.109 Sum_probs=57.7
Q ss_pred cCCcccHHHHHHHHHHhhcCCCeEE----ecCC--CCC----Ch---HHHHhhcCceeeEEEeecCCCCCcChhhHHHHH
Q 015435 106 CLSGTGSLRVGAEFLARHYHQLTIY----IPQP--TWG----NH---PKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDL 172 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~~gd~Vi----~~~p--~y~----~~---~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i 172 (407)
-+||..+..++...... -+.+. ++.. .|. +. ...++..|+.++.++.. ....-..+++.+.+
T Consensus 7 ~SGGKDS~~al~~a~~~---~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~--~~~e~~~e~l~~~l 81 (223)
T TIGR00290 7 ISGGKDSCLALYHALKE---HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTE--GTEEDEVEELKGIL 81 (223)
T ss_pred ecCcHHHHHHHHHHHHh---CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecC--CCccHHHHHHHHHH
Confidence 89999998888543322 23221 1221 121 11 23445778888776552 22333567777777
Q ss_pred HcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceee
Q 015435 173 RAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPF 215 (407)
Q Consensus 173 ~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 215 (407)
.+. ..-.++ +|-+.+......+-.+|.+-|+..+
T Consensus 82 ~~~--gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~~ 115 (223)
T TIGR00290 82 HTL--DVEAVV-------FGAIYSEYQKTRIERVCRELGLKSF 115 (223)
T ss_pred HHc--CCCEEE-------ECCcccHHHHHHHHHHHHhcCCEEe
Confidence 632 222233 5889999999999999999997665
No 482
>PRK10785 maltodextrin glucosidase; Provisional
Probab=36.00 E-value=44 Score=34.05 Aligned_cols=64 Identities=14% Similarity=0.183 Sum_probs=42.6
Q ss_pred CcChhhHHHHHHc--CCCCcEEEEecCCCCCCCC-------------CCCHHHHHHHHHHHHHcCceeeeccccccccC
Q 015435 162 GLNFQGLLEDLRA--APSGAIVLLHACAHNPTGV-------------DPTLEQWEQIRQLMRSKGLLPFFDSAYQGFAS 225 (407)
Q Consensus 162 ~~d~~~l~~~i~~--~~~~~~v~i~~~p~NPtG~-------------~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~ 225 (407)
|=|+..+.+.+.. .=...+|++.+-..+|+.. .-+.+++++|++.|+++|+.||.|-++...+.
T Consensus 175 GGDl~GI~~kLdYL~~LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V~NH~~~ 253 (598)
T PRK10785 175 GGDLDGISEKLPYLKKLGVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGVFNHTGD 253 (598)
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECCCcCCC
Confidence 3367777776642 1234566664433444321 23478999999999999999999999865553
No 483
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=35.95 E-value=16 Score=24.90 Aligned_cols=23 Identities=22% Similarity=0.323 Sum_probs=19.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcC
Q 015435 188 HNPTGVDPTLEQWEQIRQLMRSKG 211 (407)
Q Consensus 188 ~NPtG~~~~~~~l~~i~~~~~~~~ 211 (407)
.-|.|.+ +.+.++.|++++++||
T Consensus 15 ~~~~G~i-~~~~l~~la~ia~~yg 37 (69)
T PF03460_consen 15 RIPGGRI-SAEQLRALAEIAEKYG 37 (69)
T ss_dssp B-GGGEE-EHHHHHHHHHHHHHHS
T ss_pred eCCCEEE-CHHHHHHHHHHHHHhC
Confidence 4566776 8999999999999998
No 484
>PLN00011 cysteine synthase
Probab=35.91 E-value=2.6e+02 Score=25.83 Aligned_cols=53 Identities=9% Similarity=0.125 Sum_probs=35.2
Q ss_pred CceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEE
Q 015435 99 NRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYR 154 (407)
Q Consensus 99 ~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~ 154 (407)
+.|+. .++|+.+..++. ....+.---.|++|...-......++.+|++++.++
T Consensus 70 ~~vv~--aSsGN~g~alA~-~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~ 122 (323)
T PLN00011 70 STLIE--ATAGNTGIGLAC-IGAARGYKVILVMPSTMSLERRIILRALGAEVHLTD 122 (323)
T ss_pred cEEEE--eCCChHHHHHHH-HHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEEC
Confidence 34666 888888888874 222222223566666555566778889999998875
No 485
>PF04002 RadC: RadC-like JAB domain; InterPro: IPR001405 This family was named initially with reference to the Escherichia coli radC102 mutation which suggested that RadC was involved in repair of DNA lesions []. However the relevant mutation has subsequently been shown to be in recG, not radC []. In addition all attempts to characterise a radiation-related function for RadC in Streptococcus pneumoniae failed, suggesting that it is not involved in repair of DNA lesions, in recombination during transformation, in gene conversion, nor in mismatch repair [].; PDB: 2QLC_A.
Probab=35.87 E-value=1.2e+02 Score=23.59 Aligned_cols=59 Identities=20% Similarity=0.412 Sum_probs=31.1
Q ss_pred CcChhhHHH-HHHcCCCCcEEEEecCCCCCCCCC-CCHHHH---HHHHHHHHHcCc-----eeeecccccccc
Q 015435 162 GLNFQGLLE-DLRAAPSGAIVLLHACAHNPTGVD-PTLEQW---EQIRQLMRSKGL-----LPFFDSAYQGFA 224 (407)
Q Consensus 162 ~~d~~~l~~-~i~~~~~~~~v~i~~~p~NPtG~~-~~~~~l---~~i~~~~~~~~~-----~li~D~~y~~~~ 224 (407)
.+++.++.+ ++. ..-..+++++++ |+|.. .|.+|+ ++|.+.|+.-|+ ++|.++-|..|.
T Consensus 50 ~v~~R~I~~~al~-~~A~~vIl~HNH---PsG~~~PS~~D~~~T~~L~~~~~~l~I~llDHiIv~~~~~~S~~ 118 (123)
T PF04002_consen 50 PVDPREIFRRALR-LNASSVILAHNH---PSGDPEPSDADIALTRRLKKAARLLGIELLDHIIVGDGGYFSFR 118 (123)
T ss_dssp GCSHHHHHHHHHH-TT-SEEEEEEE----TTS--S--HHHHHHHHHHHHHHHHHT-EEEEEEEEESSEEEETC
T ss_pred cccHHHHHHHHHh-hCCceEEEEEEc---CCCCCCCCHhHHHHHHHHHHHHHHcCCeeeeEEEEeCCcEEEeh
Confidence 346655544 444 234567777655 44554 678888 788888887554 444455554443
No 486
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=35.77 E-value=4.1e+02 Score=25.62 Aligned_cols=74 Identities=15% Similarity=0.104 Sum_probs=43.4
Q ss_pred CCCeEEecCCCCCChH-----H----HHhhcCceeeE-EEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCC
Q 015435 125 HQLTIYIPQPTWGNHP-----K----VFTLAGLSVKT-YRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVD 194 (407)
Q Consensus 125 ~gd~Vi~~~p~y~~~~-----~----~~~~~G~~~~~-v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~ 194 (407)
+||.|+++.+..+++. . .+...|+++.. +.. ..=.+-+++.+.++.-..+.++.++ |-
T Consensus 318 ~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~----SgHa~~~dl~~~i~~~~Pk~~ipvH-------ge- 385 (422)
T TIGR00649 318 KGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHV----SGHASQEDHKLLLRLLKPKYIIPVH-------GE- 385 (422)
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEe----cCCCCHHHHHHHHHHhCCCEEEecC-------Cc-
Confidence 6789999987777665 1 23346776643 333 1224566666666533233444442 22
Q ss_pred CCHHHHHHHHHHHHHcCc
Q 015435 195 PTLEQWEQIRQLMRSKGL 212 (407)
Q Consensus 195 ~~~~~l~~i~~~~~~~~~ 212 (407)
...+.+.++++++.|+
T Consensus 386 --~~~~~~~~~~a~~~g~ 401 (422)
T TIGR00649 386 --YRMLINHTKLAEEEGY 401 (422)
T ss_pred --HHHHHHHHHHHHHcCC
Confidence 4577888888887763
No 487
>PLN00196 alpha-amylase; Provisional
Probab=35.77 E-value=44 Score=32.41 Aligned_cols=29 Identities=14% Similarity=0.123 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHHcCceeeecccccccc
Q 015435 196 TLEQWEQIRQLMRSKGLLPFFDSAYQGFA 224 (407)
Q Consensus 196 ~~~~l~~i~~~~~~~~~~li~D~~y~~~~ 224 (407)
+.++++++++.|+++|+.+|.|-++....
T Consensus 90 t~~elk~Lv~~aH~~GIkVilDvV~NH~~ 118 (428)
T PLN00196 90 NEAQLKSLIEAFHGKGVQVIADIVINHRT 118 (428)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccCcc
Confidence 38999999999999999999999976555
No 488
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=34.98 E-value=3.3e+02 Score=25.13 Aligned_cols=114 Identities=17% Similarity=0.063 Sum_probs=56.1
Q ss_pred CceEEeecCCcccHHHHHHHHHHhhcCCC--eEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCC
Q 015435 99 NRVTTVQCLSGTGSLRVGAEFLARHYHQL--TIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAP 176 (407)
Q Consensus 99 ~~i~~~~t~g~t~a~~~~~~~~~~~~~gd--~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 176 (407)
..|+. .++|+.+..++. .+. ..|= .|+++...-......++.+|++++.++- ...-+...+.+.+.+.
T Consensus 52 ~~vv~--aSsGN~g~alA~--~a~-~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~----~~~~~~~~~~~~l~~~- 121 (316)
T cd06448 52 VHVVC--SSGGNAGLAAAY--AAR-KLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGK----VWWEADNYLREELAEN- 121 (316)
T ss_pred CeEEE--eCCcHHHHHHHH--HHH-HcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC----chHHHHHHHHHHHHhc-
Confidence 45666 777777777763 222 2343 4555554434446678899999988753 1111122333334322
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeeccccccccCC
Q 015435 177 SGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASG 226 (407)
Q Consensus 177 ~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D~~y~~~~~~ 226 (407)
.....++ +..+||.+.-.-..--.+| +++-+-....|-++...+.+
T Consensus 122 ~~~~~~~-~~~~n~~~~~g~~t~~~Ei---~~q~~~~~~~D~vv~~vG~G 167 (316)
T cd06448 122 DPGPVYV-HPFDDPLIWEGHSSMVDEI---AQQLQSQEKVDAIVCSVGGG 167 (316)
T ss_pred cCCcEEe-CCCCCchhhccccHHHHHH---HHHccccCCCCEEEEEeCch
Confidence 1134455 4445666543222233444 44332112356665555544
No 489
>PF05127 Helicase_RecD: Helicase; InterPro: IPR007807 This domain is about 350 amino acid residues long and appears to have a P-loop motif, suggesting this is an ATPase. This domain is often N-terminal to a GCN5-related N-acetyltransferase domain IPR000182 from INTERPRO and C-terminal to IPR013562 from INTERPRO.; PDB: 2ZPA_B.
Probab=34.71 E-value=39 Score=28.24 Aligned_cols=104 Identities=10% Similarity=0.019 Sum_probs=40.2
Q ss_pred hcCCC-eEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHH
Q 015435 123 HYHQL-TIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWE 201 (407)
Q Consensus 123 ~~~gd-~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~ 201 (407)
...|. +|++..|...+....++.+......+.+. + +.. .....+.. ...++.+=..++++++.
T Consensus 22 ~~~~~~~I~vtAP~~~~~~~lf~~~~~~l~~~~~~-~-------~~~-------~~~~~~~~-~~~~~~~i~f~~Pd~l~ 85 (177)
T PF05127_consen 22 IQKGKIRILVTAPSPENVQTLFEFAEKGLKALGYK-E-------EKK-------KRIGQIIK-LRFNKQRIEFVAPDELL 85 (177)
T ss_dssp SS-----EEEE-SS--S-HHHHHCC------------------------------------------CCC--B--HHHHC
T ss_pred HHhcCceEEEecCCHHHHHHHHHHHHhhccccccc-c-------ccc-------cccccccc-cccccceEEEECCHHHH
Confidence 33454 79999999999999988775555545442 1 000 00111111 01112232335566655
Q ss_pred HHHHHHHHcCceeeeccccccccCCCCCchhHHHHHHHHcCCcEEEEEecCcc
Q 015435 202 QIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKN 254 (407)
Q Consensus 202 ~i~~~~~~~~~~li~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 254 (407)
.. ..+.+ +||+|||=+ . +.+-+..+.....++++..+.+..
T Consensus 86 ~~---~~~~D-lliVDEAAa------I--p~p~L~~ll~~~~~vv~stTi~GY 126 (177)
T PF05127_consen 86 AE---KPQAD-LLIVDEAAA------I--PLPLLKQLLRRFPRVVFSTTIHGY 126 (177)
T ss_dssp CT-------S-CEEECTGGG------S---HHHHHHHHCCSSEEEEEEEBSST
T ss_pred hC---cCCCC-EEEEechhc------C--CHHHHHHHHhhCCEEEEEeecccc
Confidence 55 33335 788899821 1 334455566667778777665553
No 490
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=34.23 E-value=3.7e+02 Score=24.65 Aligned_cols=104 Identities=12% Similarity=-0.004 Sum_probs=54.9
Q ss_pred CCCceEEeecCCcccHHHHHHHHHHhhcCCC--eEEecC--CCCCChHH--HHhhcCceeeEEEeecCCCCCcChhhHHH
Q 015435 97 KDNRVTTVQCLSGTGSLRVGAEFLARHYHQL--TIYIPQ--PTWGNHPK--VFTLAGLSVKTYRYYDPATRGLNFQGLLE 170 (407)
Q Consensus 97 ~~~~i~~~~t~g~t~a~~~~~~~~~~~~~gd--~Vi~~~--p~y~~~~~--~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 170 (407)
.+..+++ |.|-+.....++ ......|. +|++.+ |.+.+... .+...|+.+..++- ..+--
T Consensus 114 ~~g~~IL--T~~~S~tv~~~l--~~a~~~~~~f~V~v~EsrP~~~G~~~a~~L~~~gI~vtlI~D----------sa~~~ 179 (301)
T TIGR00511 114 RDGDVVM--THCNSEAALSVI--KTAFEQGKDIEVIATETRPRKQGHITAKELRDYGIPVTLIVD----------SAVRY 179 (301)
T ss_pred CCCCEEE--EECCcHHHHHHH--HHHHHcCCcEEEEEecCCCcchHHHHHHHHHHCCCCEEEEeh----------hHHHH
Confidence 3466788 888776665552 33333443 566665 65555322 23356777776632 12222
Q ss_pred HHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeeec
Q 015435 171 DLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFD 217 (407)
Q Consensus 171 ~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D 217 (407)
.+. +...+++=...-.+.|.++++-=-..++-.|+.+++.+++=
T Consensus 180 ~m~---~vd~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V~ 223 (301)
T TIGR00511 180 FMK---EVDHVVVGADAITANGALINKIGTSQLALAAREARVPFMVA 223 (301)
T ss_pred HHH---hCCEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEEE
Confidence 333 23333331222233354555544556777889998877764
No 491
>cd07476 Peptidases_S8_thiazoline_oxidase_subtilisin-like_protease Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases. Thiazoline oxidase/subtilisin-like protease is produced by the symbiotic bacteria Prochloron spp. that inhabit didemnid family ascidians. The cyclic peptides of the patellamide class found in didemnid extracts are now known to be synthesized by the Prochloron spp. The prepatellamide is heterocyclized to form thiazole and oxazoline rings and the peptide is cleaved to form the two cyclic patellamides A and C. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution).
Probab=34.22 E-value=1.4e+02 Score=26.79 Aligned_cols=69 Identities=9% Similarity=0.025 Sum_probs=34.6
Q ss_pred ceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCceeee
Q 015435 148 LSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFF 216 (407)
Q Consensus 148 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 216 (407)
+++..++.......+.+.+.+.+.+...-+..+=+|..+...++-.......+.+.++.+.++|+++|+
T Consensus 75 a~i~~~~v~~~~~~~~~~~~i~~ai~~a~~~g~~VIN~S~G~~~~~~~~~~~l~~a~~~a~~~gvlvv~ 143 (267)
T cd07476 75 CRGLNIPIFAEDRRGCSQLDLARAINLALEQGAHIINISGGRLTQTGEADPILANAVAMCQQNNVLIVA 143 (267)
T ss_pred CeEEEEEEEeCCCCCCCHHHHHHHHHHHHHCCCCEEEecCCcCCCCCCCCHHHHHHHHHHHHCCCEEEE
Confidence 345555554333344445555555432211112223223222221122345788888888999988875
No 492
>PLN03013 cysteine synthase
Probab=33.62 E-value=2.8e+02 Score=26.92 Aligned_cols=51 Identities=12% Similarity=0.096 Sum_probs=34.1
Q ss_pred eEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEE
Q 015435 101 VTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYR 154 (407)
Q Consensus 101 i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~ 154 (407)
|+- .++|+.++.++. ......-.-.|++|+-.-..-...++.+|++++.++
T Consensus 178 VVe--aSSGN~G~ALA~-~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~ 228 (429)
T PLN03013 178 LVE--PTSGNTGIGLAF-IAASRGYRLILTMPASMSMERRVLLKAFGAELVLTD 228 (429)
T ss_pred EEE--ECCcHHHHHHHH-HHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEEC
Confidence 655 888888888874 222222223556666555566778889999999884
No 493
>PRK08638 threonine dehydratase; Validated
Probab=33.56 E-value=1.8e+02 Score=27.03 Aligned_cols=53 Identities=15% Similarity=0.034 Sum_probs=34.6
Q ss_pred CceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEE
Q 015435 99 NRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYR 154 (407)
Q Consensus 99 ~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~ 154 (407)
..|+. +++|+.++.++. ......-.-.|++|+.....-...++.+|++++.++
T Consensus 76 ~~vv~--~SsGN~g~alA~-~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~ 128 (333)
T PRK08638 76 KGVVA--CSAGNHAQGVAL-SCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHG 128 (333)
T ss_pred CeEEE--eCCcHHHHHHHH-HHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEEC
Confidence 35666 888888888874 222222223566666555556678889999998774
No 494
>COG1908 FrhD Coenzyme F420-reducing hydrogenase, delta subunit [Energy production and conversion]
Probab=33.43 E-value=2e+02 Score=22.18 Aligned_cols=58 Identities=21% Similarity=0.323 Sum_probs=38.8
Q ss_pred ceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEecC----CCCCCCCCCCHHHHHHHHHHHHHcC
Q 015435 148 LSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHAC----AHNPTGVDPTLEQWEQIRQLMRSKG 211 (407)
Q Consensus 148 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~~----p~NPtG~~~~~~~l~~i~~~~~~~~ 211 (407)
+++++|++ .+.+|++-+.+++. .....|++..+ +|.-+|...-....+-+.++.++-|
T Consensus 30 vRiIrv~C----sGrvn~~fvl~Al~--~GaDGV~v~GC~~geCHy~~GN~ka~rR~~~lke~l~elg 91 (132)
T COG1908 30 VRIIRVMC----SGRVNPEFVLKALR--KGADGVLVAGCKIGECHYISGNYKAKRRMELLKELLKELG 91 (132)
T ss_pred eEEEEeec----cCccCHHHHHHHHH--cCCCeEEEecccccceeeeccchHHHHHHHHHHHHHHHhC
Confidence 45666655 46799999999998 55666666443 4666777665556666666666644
No 495
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=33.28 E-value=4.3e+02 Score=25.05 Aligned_cols=57 Identities=16% Similarity=0.133 Sum_probs=42.0
Q ss_pred CCCCceEE-eecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHh-hcCceeeEEEe
Q 015435 96 IKDNRVTT-VQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFT-LAGLSVKTYRY 155 (407)
Q Consensus 96 ~~~~~i~~-~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~-~~G~~~~~v~~ 155 (407)
+..+++.+ +.|.|||+++..- -++..-.||+...-+-+|....++.+ .+|.+. .+|.
T Consensus 42 l~Sedv~IDLLTDSGTgams~~--qwaamm~GDEAYagsrs~~~L~~avkdifGfq~-~iPt 100 (471)
T COG3033 42 LDSEDVFIDLLTDSGTGAMTDK--QWAAMMRGDEAYAGSRSYYALADAVKDIFGFQY-TIPT 100 (471)
T ss_pred ccccceEEEeeccCCcccccHH--HHHHHhccchhhcccccHHHHHHHHHHhcCcee-eeec
Confidence 44577777 6699999999776 34456689999888888888888777 567643 3444
No 496
>COG1204 Superfamily II helicase [General function prediction only]
Probab=33.24 E-value=2.2e+02 Score=30.05 Aligned_cols=55 Identities=15% Similarity=0.042 Sum_probs=34.8
Q ss_pred CceEE-eecCCcccHHHHHHHHHHhhcC-CCeEEecCCCCCCh----HH--HHhhcCceeeEEE
Q 015435 99 NRVTT-VQCLSGTGSLRVGAEFLARHYH-QLTIYIPQPTWGNH----PK--VFTLAGLSVKTYR 154 (407)
Q Consensus 99 ~~i~~-~~t~g~t~a~~~~~~~~~~~~~-gd~Vi~~~p~y~~~----~~--~~~~~G~~~~~v~ 154 (407)
+|+++ .+|.+|...+..+. ++..+.+ |.++++..|.=.-. .. .++..|.+|..+.
T Consensus 48 ~N~li~aPTgsGKTlIA~la-i~~~l~~~~~k~vYivPlkALa~Ek~~~~~~~~~~GirV~~~T 110 (766)
T COG1204 48 ENVLISAPTGSGKTLIALLA-ILSTLLEGGGKVVYIVPLKALAEEKYEEFSRLEELGIRVGIST 110 (766)
T ss_pred CcEEEEcCCCCchHHHHHHH-HHHHHHhcCCcEEEEeChHHHHHHHHHHhhhHHhcCCEEEEec
Confidence 67777 77888888777765 4444554 46787777653211 11 3457788887663
No 497
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae (PubMed:11083842) and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (PubMed:8798645).
Probab=32.72 E-value=55 Score=35.83 Aligned_cols=28 Identities=14% Similarity=0.376 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHcCceeeecccccccc
Q 015435 197 LEQWEQIRQLMRSKGLLPFFDSAYQGFA 224 (407)
Q Consensus 197 ~~~l~~i~~~~~~~~~~li~D~~y~~~~ 224 (407)
.++++++++.||++|+-||.|=+|....
T Consensus 554 i~EfK~LV~alH~~GI~VILDVVyNHt~ 581 (1111)
T TIGR02102 554 IAEFKNLINEIHKRGMGVILDVVYNHTA 581 (1111)
T ss_pred HHHHHHHHHHHHHCCCEEEEeccccccc
Confidence 6899999999999999999999986543
No 498
>PF04016 DUF364: Domain of unknown function (DUF364); InterPro: IPR007161 This is a entry represents of bacterial and archaeal proteins of unknown function.; PDB: 3L5O_B 3NPG_A.
Probab=32.62 E-value=78 Score=25.48 Aligned_cols=69 Identities=12% Similarity=0.039 Sum_probs=50.5
Q ss_pred CceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcC
Q 015435 99 NRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAA 175 (407)
Q Consensus 99 ~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 175 (407)
-++++ .+|+|-.+..+-.++..+.++..+++.-|+=+.+.+.+...|+..+.--. ..|++.+.+.+.+.
T Consensus 63 aD~vi--iTGsTlvN~Ti~~iL~~~~~~~~vil~GpS~~~~P~~l~~~Gv~~v~g~~------v~d~~~~~~~i~~G 131 (147)
T PF04016_consen 63 ADVVI--ITGSTLVNGTIDDILELARNAREVILYGPSAPLHPEALFDYGVTYVGGSR------VVDPEKVLRAISEG 131 (147)
T ss_dssp -SEEE--EECHHCCTTTHHHHHHHTTTSSEEEEESCCGGS-GGGGCCTT-SEEEEEE------ES-HHHHHHHHCTT
T ss_pred CCEEE--EEeeeeecCCHHHHHHhCccCCeEEEEecCchhhHHHHHhCCCCEEEEEE------EeCHHHHHHHHHcC
Confidence 46777 78888777777777888877889999999988888888888887765433 25888999888743
No 499
>PLN02970 serine racemase
Probab=32.42 E-value=1.7e+02 Score=27.17 Aligned_cols=54 Identities=13% Similarity=-0.025 Sum_probs=36.2
Q ss_pred CceEEeecCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEe
Q 015435 99 NRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRY 155 (407)
Q Consensus 99 ~~i~~~~t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~ 155 (407)
..|+. .++|+.++.++. ......-.-.|+++..+...-...++.+|++++.++-
T Consensus 76 ~~vv~--aSsGN~g~alA~-~a~~~G~~~~ivvp~~~~~~k~~~~~~~GA~Vi~~~~ 129 (328)
T PLN02970 76 KGVVT--HSSGNHAAALAL-AAKLRGIPAYIVVPKNAPACKVDAVIRYGGIITWCEP 129 (328)
T ss_pred CeEEE--ECCcHHHHHHHH-HHHHcCCCEEEEECCCCCHHHHHHHHhcCCEEEEeCC
Confidence 45777 888888888874 2222222245667765555556778899999998853
No 500
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=32.28 E-value=2.4e+02 Score=23.02 Aligned_cols=88 Identities=10% Similarity=0.094 Sum_probs=45.9
Q ss_pred cCCcccHHHHHHHHHHhhcCCCeEEecCCCCCChHHHHhhcCceeeEEEeecCCCCCcChhhHHHHHHcCCCCcEEEEec
Q 015435 106 CLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185 (407)
Q Consensus 106 t~g~t~a~~~~~~~~~~~~~gd~Vi~~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~v~i~~ 185 (407)
..|+|+.+...+ +-.++..|-+|....-.-..... ..+++++..++ .|++.+.+++. . ...++. +
T Consensus 3 V~GatG~vG~~l-~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~-------~d~~~~~~al~--~-~d~vi~-~ 67 (183)
T PF13460_consen 3 VFGATGFVGRAL-AKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDL-------FDPDSVKAALK--G-ADAVIH-A 67 (183)
T ss_dssp EETTTSHHHHHH-HHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCT-------TCHHHHHHHHT--T-SSEEEE-C
T ss_pred EECCCChHHHHH-HHHHHHCCCEEEEEecCchhccc---ccccccceeee-------hhhhhhhhhhh--h-cchhhh-h
Confidence 345555555542 22334566665554322111111 44444444322 57789999887 3 344344 2
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 015435 186 CAHNPTGVDPTLEQWEQIRQLMRSKGL 212 (407)
Q Consensus 186 ~p~NPtG~~~~~~~l~~i~~~~~~~~~ 212 (407)
.+.++. .....+.+++.|+++|+
T Consensus 68 ~~~~~~----~~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 68 AGPPPK----DVDAAKNIIEAAKKAGV 90 (183)
T ss_dssp CHSTTT----HHHHHHHHHHHHHHTTS
T ss_pred hhhhcc----ccccccccccccccccc
Confidence 222222 26678888888888775
Done!