Query         015436
Match_columns 407
No_of_seqs    174 out of 1875
Neff          10.9
Searched_HMMs 46136
Date          Fri Mar 29 06:17:48 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015436.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015436hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.1E-73 2.5E-78  526.5  36.1  384    3-400   101-488 (489)
  2 KOG0158 Cytochrome P450 CYP3/C 100.0 7.5E-71 1.6E-75  500.2  31.3  370   14-400   117-499 (499)
  3 PLN02971 tryptophan N-hydroxyl 100.0 1.7E-68 3.6E-73  510.6  38.3  396    6-405   136-539 (543)
  4 PLN02687 flavonoid 3'-monooxyg 100.0   2E-67 4.4E-72  501.6  37.6  395    7-405   111-514 (517)
  5 PLN02183 ferulate 5-hydroxylas 100.0 5.5E-67 1.2E-71  498.5  37.7  378   12-399   118-511 (516)
  6 KOG0159 Cytochrome P450 CYP11/ 100.0 1.8E-67 3.9E-72  467.4  31.6  373   10-400   138-518 (519)
  7 PLN03234 cytochrome P450 83B1; 100.0 7.4E-67 1.6E-71  497.1  36.7  382   11-399   110-498 (499)
  8 PLN00110 flavonoid 3',5'-hydro 100.0 1.2E-66 2.6E-71  493.4  37.3  385   11-405   112-502 (504)
  9 PLN03112 cytochrome P450 famil 100.0 2.2E-66 4.9E-71  495.2  38.9  391   13-405   115-513 (514)
 10 PLN02966 cytochrome P450 83A1  100.0 1.8E-65 3.9E-70  486.8  37.7  384    9-399   109-499 (502)
 11 PLN00168 Cytochrome P450; Prov 100.0 1.5E-65 3.2E-70  489.0  36.9  386    6-401   114-518 (519)
 12 PLN02394 trans-cinnamate 4-mon 100.0 3.1E-65 6.7E-70  486.4  36.3  380   11-401   112-503 (503)
 13 PTZ00404 cytochrome P450; Prov 100.0 4.9E-65 1.1E-69  482.5  34.6  370   11-399   109-482 (482)
 14 PLN02290 cytokinin trans-hydro 100.0 1.4E-64 2.9E-69  483.2  35.8  368   11-400   141-515 (516)
 15 PLN03018 homomethionine N-hydr 100.0 5.6E-64 1.2E-68  476.1  39.4  392    7-403   120-527 (534)
 16 PLN02655 ent-kaurene oxidase   100.0 2.1E-64 4.6E-69  475.2  35.8  381    7-401    77-465 (466)
 17 PLN02169 fatty acid (omega-1)- 100.0 2.7E-64 5.8E-69  476.5  32.9  371   10-400   115-500 (500)
 18 PLN02738 carotene beta-ring hy 100.0 8.5E-64 1.8E-68  479.9  35.7  372   11-402   211-597 (633)
 19 KOG0157 Cytochrome P450 CYP4/C 100.0 1.6E-64 3.4E-69  475.2  29.8  371   11-401   118-497 (497)
 20 PLN02426 cytochrome P450, fami 100.0 1.6E-63 3.5E-68  470.4  33.1  368   11-400   120-500 (502)
 21 PLN03195 fatty acid omega-hydr 100.0 3.7E-63   8E-68  473.0  32.8  376   11-400   112-516 (516)
 22 PLN02500 cytochrome P450 90B1  100.0 2.6E-62 5.5E-67  464.3  35.3  351   13-398   124-488 (490)
 23 PF00067 p450:  Cytochrome P450 100.0 7.1E-63 1.5E-67  468.0  30.0  374   10-396    83-463 (463)
 24 PLN02936 epsilon-ring hydroxyl 100.0 7.2E-61 1.6E-65  453.1  35.1  372   11-403    96-485 (489)
 25 PLN02774 brassinosteroid-6-oxi 100.0 2.8E-60   6E-65  446.8  33.1  346   13-398   112-462 (463)
 26 PLN02302 ent-kaurenoic acid ox 100.0   2E-59 4.3E-64  446.2  35.4  354   15-401   130-489 (490)
 27 PLN03141 3-epi-6-deoxocathaste 100.0 1.5E-59 3.2E-64  440.9  33.8  351   13-401    93-451 (452)
 28 PLN02196 abscisic acid 8'-hydr 100.0   1E-58 2.2E-63  435.9  31.5  343   12-399   116-462 (463)
 29 PLN02987 Cytochrome P450, fami 100.0 2.4E-57 5.3E-62  425.2  35.8  351   12-400   115-469 (472)
 30 KOG0684 Cytochrome P450 [Secon 100.0 4.4E-54 9.6E-59  372.9  26.3  363   11-400   112-485 (486)
 31 COG2124 CypX Cytochrome P450 [ 100.0 5.2E-53 1.1E-57  388.7  28.4  296   15-370    91-387 (411)
 32 PLN02648 allene oxide synthase 100.0 6.7E-50 1.4E-54  372.3  25.2  323   14-371   117-463 (480)
 33 PF12508 DUF3714:  Protein of u  67.0     1.5 3.3E-05   35.9  -0.4   42  252-295    52-94  (200)
 34 PF05952 ComX:  Bacillus compet  47.8      20 0.00043   22.6   2.2   25  215-239     4-28  (57)
 35 PRK06789 flagellar motor switc  46.6      20 0.00044   24.0   2.3   39  258-296    21-62  (74)
 36 PF09201 SRX:  SRX;  InterPro:   46.4      16 0.00035   27.6   2.0   22  341-362    19-40  (148)
 37 PF12554 MOZART1:  Mitotic-spin  43.6      71  0.0015   19.4   4.0   42  193-234     6-47  (48)
 38 KOG3506 40S ribosomal protein   42.0      12 0.00026   23.1   0.6   10  334-343    13-22  (56)
 39 PF07886 BA14K:  BA14K-like pro  41.2      29 0.00062   18.8   1.9   16  328-343    16-31  (31)
 40 TIGR03779 Bac_Flav_CT_M Bacter  41.0     5.8 0.00013   36.5  -1.2   44  251-296   254-298 (410)
 41 COG1759 5-formaminoimidazole-4  39.9      51  0.0011   29.2   4.3   70  255-357   275-352 (361)
 42 COG2101 SPT15 TATA-box binding  38.1     9.7 0.00021   30.1  -0.2   36  311-346    35-70  (185)
 43 PF14483 Cut8_M:  Cut8 dimerisa  35.0      64  0.0014   18.4   2.8   19  214-232    16-35  (38)
 44 PF12444 Sox_N:  Sox developmen  29.2      38 0.00082   23.4   1.5   20  351-370    61-80  (84)
 45 TIGR00589 ogt O-6-methylguanin  27.9      70  0.0015   21.9   2.7   60  225-285     2-66  (80)
 46 COG3954 PrkB Phosphoribulokina  27.7 1.4E+02  0.0031   24.4   4.7   64  202-265    14-89  (289)
 47 COG0851 MinE Septum formation   27.4   1E+02  0.0022   21.4   3.3   41  200-240     5-52  (88)
 48 PF13993 YccJ:  YccJ-like prote  27.0      83  0.0018   20.0   2.5   31  204-234     9-40  (69)
 49 PF11138 DUF2911:  Protein of u  26.3      60  0.0013   25.2   2.3   22  276-297    52-73  (145)
 50 PF14129 DUF4296:  Domain of un  25.2 2.4E+02  0.0051   19.5   5.7   49  190-238    30-78  (87)
 51 PRK05933 type III secretion sy  24.8      65  0.0014   28.6   2.5   42  255-296   317-362 (372)
 52 PHA01346 hypothetical protein   23.6      63  0.0014   18.6   1.5   17  223-239    29-46  (53)
 53 COG5598 Trimethylamine:corrino  23.0 1.5E+02  0.0032   28.3   4.5   71  252-365    99-173 (526)
 54 cd04518 TBP_archaea archaeal T  22.9      19  0.0004   29.0  -1.0   35  311-345    29-63  (174)
 55 cd04516 TBP_eukaryotes eukaryo  22.1      40 0.00086   27.2   0.7   57  311-367    29-87  (174)
 56 PLN00062 TATA-box-binding prot  22.1      44 0.00096   27.0   1.0   55  311-365    29-85  (179)
 57 PF14550 Peptidase_U35_2:  Puta  21.9      60  0.0013   24.3   1.5   21  275-295    72-92  (122)
 58 PF10763 DUF2584:  Protein of u  21.5      15 0.00033   24.8  -1.4   24  259-283    28-53  (80)
 59 PF08492 SRP72:  SRP72 RNA-bind  21.5      60  0.0013   20.7   1.3    7  314-320    44-50  (59)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.1e-73  Score=526.53  Aligned_cols=384  Identities=46%  Similarity=0.781  Sum_probs=337.5

Q ss_pred             CccccccCCcceEeCCCChhHHHHHhhhhccCCChHhhhhhHHHHHHHHHHHHHHHHhh-cCCceechHHHHHHHHHHHh
Q 015436            3 AGKYTGYNFSNITWSPYGPYFNQARKICTMELFTAKRLKSYEYIRVEELNVLLKHLYES-SGKPIALKDHLADVSLNVIS   81 (407)
Q Consensus         3 ~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~-~~~~vd~~~~~~~~~~~~i~   81 (407)
                      +.+++++++.|+++++||++|+.+||+++..+|+...++++.....++++.+++.+.+. ++++||+...+..++.++|+
T Consensus       101 ~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~  180 (489)
T KOG0156|consen  101 TLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVIC  180 (489)
T ss_pred             hHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHH
Confidence            34788989999999999999999999999999999999999888899999999999863 23799999999999999999


Q ss_pred             HHhhcCcccccccccchhhHHHHHHHHHHHHHhhccccccCccc-cccccC-ccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 015436           82 RVVLGKKYSNERQNGIEITRHELKEMIDELILLNGVFDIGDSIP-WLGFLD-LQGNIKRMKAVAKKFDRFLEQVVDEHNA  159 (407)
Q Consensus        82 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~  159 (407)
                      +++||.++..++    +....++..++.+.....+.+.+.+++| ++.++. ..+..++......++..++++.|+++++
T Consensus       181 ~~~fG~rf~~~~----~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~  256 (489)
T KOG0156|consen  181 RMLFGRRFEEED----EEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHRE  256 (489)
T ss_pred             HHHhCCccccCC----chHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999997643    2345668899999999999998999999 677764 3356777788888899999999999988


Q ss_pred             HHccCCCCCCCcHHHHHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhcc
Q 015436          160 RRKGIDNYVAKDMVDVLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIG  239 (407)
Q Consensus       160 ~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~  239 (407)
                      .. . . .+..|++|.++....++.... +++++|...+.++++||+|||++|+.|++.+|.+||++|+|+++||++++|
T Consensus       257 ~~-~-~-~~~~D~vD~lL~~~~~~~~~~-~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG  332 (489)
T KOG0156|consen  257 KI-G-D-EEGRDFVDALLKLMKEEKAEG-LTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVG  332 (489)
T ss_pred             hh-c-c-CCCCcHHHHHHHhhcccccCC-CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence            75 2 2 223899999999877542122 999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccccCCCChhHHHHHHHhhcCCC-CCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCCCCCCCCCCCcc
Q 015436          240 KERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALWENPNEFCPERF  318 (407)
Q Consensus       240 ~~~~~~~~~~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~  318 (407)
                      .++.++.+|+.++|||+|||+|++|++| +|..++|.+.+|+.++||.|||||.|.+++|++||||++|+||++|+||||
T Consensus       333 ~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERF  412 (489)
T KOG0156|consen  333 KGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERF  412 (489)
T ss_pred             CCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhh
Confidence            9888999999999999999999999999 999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeEEEee
Q 015436          319 LGKSIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVVAQP  398 (407)
Q Consensus       319 l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  398 (407)
                      ++++ +.+.....++|||.|+|+|||..+|++++.+++|.|+++|+|+.+++    ++++.... +++..+.++.+...+
T Consensus       413 l~~~-d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~----~~d~~e~~-~~~~~~~pl~~~~~~  486 (489)
T KOG0156|consen  413 LDSN-DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG----KVDMEEAG-LTLKKKKPLKAVPVP  486 (489)
T ss_pred             cCCc-cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC----CCCCcccc-cceecCCcceeeeec
Confidence            9874 22226689999999999999999999999999999999999999865    34554443 566667788888777


Q ss_pred             cC
Q 015436          399 RL  400 (407)
Q Consensus       399 R~  400 (407)
                      |.
T Consensus       487 r~  488 (489)
T KOG0156|consen  487 RL  488 (489)
T ss_pred             CC
Confidence            74


No 2  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=7.5e-71  Score=500.23  Aligned_cols=370  Identities=25%  Similarity=0.368  Sum_probs=294.7

Q ss_pred             eEeCCCChhHHHHHhhhhccCCChHhhhhhHHHHHHHHHHHHHHHHhh--cCCceechHHHHHHHHHHHhHHhhcCcccc
Q 015436           14 ITWSPYGPYFNQARKICTMELFTAKRLKSYEYIRVEELNVLLKHLYES--SGKPIALKDHLADVSLNVISRVVLGKKYSN   91 (407)
Q Consensus        14 ~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~   91 (407)
                      -+|...|+.||++|..+ +|.|++.+++.+.|.+.+.++++++.+.+.  .+..+++.+.+..++.|||++++||.+.++
T Consensus       117 ~Lf~~~g~~WK~lR~~l-sP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~~AfG~~~~s  195 (499)
T KOG0158|consen  117 NLFFLRGERWKRLRTKL-SPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGSCAFGLDANS  195 (499)
T ss_pred             CchhccCchHHHHHHhh-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhHhhcccchhh
Confidence            44555699999999999 799999999999999999999999999986  225889999999999999999999998866


Q ss_pred             cccccchhhHHHHHHHHHHHHHh-hcccc----ccCccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Q 015436           92 ERQNGIEITRHELKEMIDELILL-NGVFD----IGDSIPWLGFLDLQGNIKRMKAVAKKFDRFLEQVVDEHNARRKGIDN  166 (407)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  166 (407)
                      ...     ...+|.......+.. .....    ....+|.+....  ..........+.+.+.+...++.+..     ..
T Consensus       196 ~~d-----~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l--~~~~~~~~~~~~~~~~v~~~v~~R~~-----~~  263 (499)
T KOG0158|consen  196 LRD-----PKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL--RVKLFPEDVTDFFRKLVNSRVEQREK-----EN  263 (499)
T ss_pred             hcC-----chHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh--hcccChHHHHHHHHHHHHHHHHHHHh-----cC
Confidence            431     224555544444443 22111    122233222210  01112334444455555555555511     23


Q ss_pred             CCCCcHHHHHHHhcCC--C-Cccc-ccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhccCCc
Q 015436          167 YVAKDMVDVLLLLADD--P-TLEV-RLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIGKER  242 (407)
Q Consensus       167 ~~~~d~~~~ll~~~~~--~-~~~~-~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~  242 (407)
                      ....|+++.+++...+  . .... .++.++|++++..+++||.||||++|++++|+||+||++|+|||+||++++.+..
T Consensus       264 ~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~  343 (499)
T KOG0158|consen  264 IERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKE  343 (499)
T ss_pred             CCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccC
Confidence            5688999999998853  1 1112 5999999999999999999999999999999999999999999999999977655


Q ss_pred             ccccccCCCChhHHHHHHHhhcCCC-CCCCCcceeecceeec-ceeeCCCCEEEecchhhccCCCCCCCCCCCCCCccCC
Q 015436          243 WFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVA-AYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLG  320 (407)
Q Consensus       243 ~~~~~~~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~-g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~  320 (407)
                      .+|+|.+.+|+||++||+||||+|| ++. +.|.+++|++++ ++.||||+.|.++++++||||++||||++|+||||.+
T Consensus       344 ~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~  422 (499)
T KOG0158|consen  344 GLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEE  422 (499)
T ss_pred             CCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCC
Confidence            5999999999999999999999999 666 779999999999 9999999999999999999999999999999999997


Q ss_pred             CCCCCCCCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeEEEeecC
Q 015436          321 KSIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVVAQPRL  400 (407)
Q Consensus       321 ~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~  400 (407)
                      ++.+ ..++..|+|||.|||.|+|++||.+|+|++|++||++|+++..+. + .+.......+.++.|++++++++++|+
T Consensus       423 ~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~-t-~~~~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  423 ENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPT-T-IIPLEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             Cccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCc-c-cCcccCCccceeeecCCceEEEEEeCC
Confidence            6644 447789999999999999999999999999999999999998663 2 222111122667788999999999985


No 3  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=1.7e-68  Score=510.60  Aligned_cols=396  Identities=31%  Similarity=0.529  Sum_probs=309.0

Q ss_pred             ccccCCcceEeCCCChhHHHHHhhhhccCCChHhhhhhHHHHHHHHHHHHHHHHhh--cCCceechHHHHHHHHHHHhHH
Q 015436            6 YTGYNFSNITWSPYGPYFNQARKICTMELFTAKRLKSYEYIRVEELNVLLKHLYES--SGKPIALKDHLADVSLNVISRV   83 (407)
Q Consensus         6 ~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~~i~~~   83 (407)
                      +++.+..++++..+|+.|+++||++..+++++..++.+.+.+.++++.+++.+.+.  .++++|+.+.+..+++++++++
T Consensus       136 ~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~  215 (543)
T PLN02971        136 ILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIKRL  215 (543)
T ss_pred             hccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHHHH
Confidence            34444345688888999999999996677887777888999999999999888653  4568999999999999999999


Q ss_pred             hhcCcccccccccchhhHHHHHHHHHHHHHhhc---cccccCccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015436           84 VLGKKYSNERQNGIEITRHELKEMIDELILLNG---VFDIGDSIPWLGFLDLQGNIKRMKAVAKKFDRFLEQVVDEHNAR  160 (407)
Q Consensus        84 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  160 (407)
                      +||.++........+....+....++.++....   ...+.+++|++++++..+..+...+..+.+.+++.+.++++++.
T Consensus       216 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  295 (543)
T PLN02971        216 MFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERIKM  295 (543)
T ss_pred             HhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999987321100000001122233333332211   12234567776654322334455666777888888888887664


Q ss_pred             HccCCCCCCCcHHHHHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhccC
Q 015436          161 RKGIDNYVAKDMVDVLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIGK  240 (407)
Q Consensus       161 ~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~  240 (407)
                      .+.+......|+++.+++...+++ ...++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++++.
T Consensus       296 ~~~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~  374 (543)
T PLN02971        296 WREGKRTQIEDFLDIFISIKDEAG-QPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGK  374 (543)
T ss_pred             HhccCCCCCcCHHHHHHhhhcccC-CCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC
Confidence            422112234799999998654321 2248999999999999999999999999999999999999999999999999988


Q ss_pred             CcccccccCCCChhHHHHHHHhhcCCC-CCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCCCCCCCCCCCccC
Q 015436          241 ERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALWENPNEFCPERFL  319 (407)
Q Consensus       241 ~~~~~~~~~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l  319 (407)
                      ++.++++++.+||||+|||+|+||++| ++..++|.+.+|++++||.|||||.|.+++|++||||++|+||++|+||||+
T Consensus       375 ~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl  454 (543)
T PLN02971        375 ERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHL  454 (543)
T ss_pred             CCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccCC
Confidence            788999999999999999999999999 8887889999999999999999999999999999999999999999999999


Q ss_pred             CCCCC--CCCCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeEEEe
Q 015436          320 GKSID--VKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVVAQ  397 (407)
Q Consensus       320 ~~~~~--~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  397 (407)
                      ++..+  ....+..|+|||.|+|.|+|++||++|+++++|+|+++|+|+++++.  .+.++...++ ++..+.++.+.++
T Consensus       455 ~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~  531 (543)
T PLN02971        455 NECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSE--TRVELMESSH-DMFLSKPLVMVGE  531 (543)
T ss_pred             CCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCC--CCcchhhhcC-cccccccceeeee
Confidence            64322  11245689999999999999999999999999999999999987653  2455555555 4434569999999


Q ss_pred             ecCCCCCC
Q 015436          398 PRLAPHLY  405 (407)
Q Consensus       398 ~R~~~~~~  405 (407)
                      +|....+|
T Consensus       532 ~~~~~~~~  539 (543)
T PLN02971        532 LRLSEDLY  539 (543)
T ss_pred             ecCCcccc
Confidence            99655554


No 4  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=2e-67  Score=501.57  Aligned_cols=395  Identities=40%  Similarity=0.776  Sum_probs=318.7

Q ss_pred             cccCCcceEeCCCChhHHHHHhhhhccCCChHhhhhhHHHHHHHHHHHHHHHHhh-cCCceechHHHHHHHHHHHhHHhh
Q 015436            7 TGYNFSNITWSPYGPYFNQARKICTMELFTAKRLKSYEYIRVEELNVLLKHLYES-SGKPIALKDHLADVSLNVISRVVL   85 (407)
Q Consensus         7 ~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~-~~~~vd~~~~~~~~~~~~i~~~~f   85 (407)
                      +++.+.+++++.+|+.|+++||++..++|+.++++.+.+.+.++++.+++.|.+. +++++|+.+.+..+++|+++.++|
T Consensus       111 ~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi~~~~f  190 (517)
T PLN02687        111 MAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALGRAMV  190 (517)
T ss_pred             hccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHh
Confidence            3444457788888999999999994489999999999999999999999999764 567899999999999999999999


Q ss_pred             cCcccccccccchhhHHHHHHHHHHHHHhhccccccCccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Q 015436           86 GKKYSNERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWLGFLDLQGNIKRMKAVAKKFDRFLEQVVDEHNARRKGID  165 (407)
Q Consensus        86 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  165 (407)
                      |.++...+.   +.....+...+..+..........+++|++.++......++..+..+.+.+++.+.++++++..+. +
T Consensus       191 G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~-~  266 (517)
T PLN02687        191 GRRVFAGDG---DEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQT-G  266 (517)
T ss_pred             CccccccCC---cchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccc-c
Confidence            998754221   112355666766666544433334567766554333334556667778888888888888765421 1


Q ss_pred             CCCCCcHHHHHHHhcCCC---CcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhccCCc
Q 015436          166 NYVAKDMVDVLLLLADDP---TLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIGKER  242 (407)
Q Consensus       166 ~~~~~d~~~~ll~~~~~~---~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~  242 (407)
                      .....|+++.++....++   ..+..++++++..++..+++||+|||+++++|++++|++||++|+|+++|++++++..+
T Consensus       267 ~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~  346 (517)
T PLN02687        267 SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDR  346 (517)
T ss_pred             CcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCC
Confidence            134579999999865431   11346899999999999999999999999999999999999999999999999998777


Q ss_pred             ccccccCCCChhHHHHHHHhhcCCC-CCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCCCCCCCCCCCccCCC
Q 015436          243 WFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGK  321 (407)
Q Consensus       243 ~~~~~~~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~  321 (407)
                      .++.+++.+||||+|||+|+||++| ++..++|.+.+|++++|+.||+||.|.++++++||||++|+||++|+||||++.
T Consensus       347 ~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~  426 (517)
T PLN02687        347 LVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPG  426 (517)
T ss_pred             CCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCC
Confidence            7899999999999999999999999 777788999999999999999999999999999999999999999999999964


Q ss_pred             CCC----CCCCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeEEEe
Q 015436          322 SID----VKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVVAQ  397 (407)
Q Consensus       322 ~~~----~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  397 (407)
                      +..    .......++|||.|+|.|+|++||++|+++++|.|+++|+|++.++....+.++...+.+.+.++.++.|+++
T Consensus       427 ~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (517)
T PLN02687        427 GEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPR  506 (517)
T ss_pred             CCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeec
Confidence            321    1123457999999999999999999999999999999999998766322233333345566666778999999


Q ss_pred             ecCCCCCC
Q 015436          398 PRLAPHLY  405 (407)
Q Consensus       398 ~R~~~~~~  405 (407)
                      +|...+-|
T Consensus       507 ~R~~~~~~  514 (517)
T PLN02687        507 PRLLPSAY  514 (517)
T ss_pred             cCCChhhc
Confidence            99655544


No 5  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=5.5e-67  Score=498.49  Aligned_cols=378  Identities=37%  Similarity=0.735  Sum_probs=302.6

Q ss_pred             cceEeCCCChhHHHHHhhhhccCCChHhhhhhHHHHHHHHHHHHHHHHhhcCCceechHHHHHHHHHHHhHHhhcCcccc
Q 015436           12 SNITWSPYGPYFNQARKICTMELFTAKRLKSYEYIRVEELNVLLKHLYESSGKPIALKDHLADVSLNVISRVVLGKKYSN   91 (407)
Q Consensus        12 ~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~   91 (407)
                      .+.+++.+|+.|+++||+++.++|+.++++.+.+.+ ++++.+++.|....++++|+.+.+..++++++++++||.+.+.
T Consensus       118 ~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~vi~~~~fG~~~~~  196 (516)
T PLN02183        118 ADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSSNIGKPVNIGELIFTLTRNITYRAAFGSSSNE  196 (516)
T ss_pred             CceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHhHhhcCcccc
Confidence            356777789999999999657899999999888864 6899999999654577899999999999999999999987643


Q ss_pred             cccccchhhHHHHHHHHHHHHHhhccccccCccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHccC-----CC
Q 015436           92 ERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWLGFLDLQGNIKRMKAVAKKFDRFLEQVVDEHNARRKGI-----DN  166 (407)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~  166 (407)
                      ..        +++.+.+..+...........++||+.++......++..+..+.+.+++.+.++++++.....     +.
T Consensus       197 ~~--------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  268 (516)
T PLN02183        197 GQ--------DEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADNDSE  268 (516)
T ss_pred             hH--------HHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccc
Confidence            22        456666665554444334455677766543322345666677778888888888776543221     11


Q ss_pred             CCCCcHHHHHHHhcCCCC---------cccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHh
Q 015436          167 YVAKDMVDVLLLLADDPT---------LEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRV  237 (407)
Q Consensus       167 ~~~~d~~~~ll~~~~~~~---------~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~  237 (407)
                      ....|+++.++....++.         ....++++++..++.++++||+|||+++++|++++|++||++|+|+++|++++
T Consensus       269 ~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v  348 (516)
T PLN02183        269 EAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADV  348 (516)
T ss_pred             cccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            134689999997543211         12358999999999999999999999999999999999999999999999999


Q ss_pred             ccCCcccccccCCCChhHHHHHHHhhcCCC-CCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCCCCCCCCCCC
Q 015436          238 IGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALWENPNEFCPE  316 (407)
Q Consensus       238 ~~~~~~~~~~~~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~  316 (407)
                      ++..+.++++++++||||+|||+|+|||+| ++... |.+.+|++++|+.|||||+|.++++++||||++|+||++|+||
T Consensus       349 ~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~-r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~Pe  427 (516)
T PLN02183        349 VGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLL-HETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPS  427 (516)
T ss_pred             cCCCCCCCHHHhccChHHHHHHHHHhccCCCcccee-eeccCceeECCEEECCCCEEEEehhhhcCCccccCCccccCch
Confidence            986667899999999999999999999999 77765 9999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCC-CCCCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeEE
Q 015436          317 RFLGKSID-VKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVV  395 (407)
Q Consensus       317 R~l~~~~~-~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  395 (407)
                      ||++++.. ...+...|+|||.|+|.|+|++||++|+++++|+|+++|+|+..++....+.+....++.+.++..++.+.
T Consensus       428 Rfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (516)
T PLN02183        428 RFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRATRLVAV  507 (516)
T ss_pred             hhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccCCCcEEE
Confidence            99964431 12245689999999999999999999999999999999999987663222233334445555556688888


Q ss_pred             Eeec
Q 015436          396 AQPR  399 (407)
Q Consensus       396 ~~~R  399 (407)
                      +++|
T Consensus       508 ~~~r  511 (516)
T PLN02183        508 PTYR  511 (516)
T ss_pred             eecC
Confidence            8888


No 6  
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.8e-67  Score=467.40  Aligned_cols=373  Identities=24%  Similarity=0.315  Sum_probs=315.4

Q ss_pred             CCcceEeCCCChhHHHHHhhhhccCCChHhhhhhHHHHHHHHHHHHHHHHhh-----cCCceechHHHHHHHHHHHhHHh
Q 015436           10 NFSNITWSPYGPYFNQARKICTMELFTAKRLKSYEYIRVEELNVLLKHLYES-----SGKPIALKDHLADVSLNVISRVV   84 (407)
Q Consensus        10 ~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~-----~~~~vd~~~~~~~~~~~~i~~~~   84 (407)
                      +..|++... |+.|.+.|..++..++.++.++.|.|.+++.+++++..+...     +..+.|+.+.+.+++++.||.++
T Consensus       138 ~~~Gl~~~~-G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~wslEsi~~V~  216 (519)
T KOG0159|consen  138 GVCGLFLLE-GPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWSLESICLVL  216 (519)
T ss_pred             cCCCcccCC-CHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHH
Confidence            345666665 999999999998788999999999999999999999999887     23467999999999999999999


Q ss_pred             hcCcccccccccchhhHHHHHHHHHHHHHhhccccccCccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 015436           85 LGKKYSNERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWLGFLDLQGNIKRMKAVAKKFDRFLEQVVDEHNARRKGI  164 (407)
Q Consensus        85 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  164 (407)
                      ||++++....+ .++..+.|++++..++.......   +.|-++.+..++.+++..++.+.+.++..+.|+....+.+..
T Consensus       217 l~~rlG~L~~~-~~~~a~~fi~ai~~~F~~s~~l~---~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id~~l~~l~~~  292 (519)
T KOG0159|consen  217 LGTRLGLLGES-PPSEAQQFIDAIKKMFESSAQLM---LMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYIDNALEELEKQ  292 (519)
T ss_pred             HhcccccccCC-CCHHHHHHHHHHHHHHHhHHHHH---hcchHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999875533 45677889999999987655432   334333334455678888999999999999999988776543


Q ss_pred             CCC--CCCcHHHHHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhccC-C
Q 015436          165 DNY--VAKDMVDVLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIGK-E  241 (407)
Q Consensus       165 ~~~--~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~-~  241 (407)
                      ...  ....++-.++.       .+.++.+.++.+++++++||.|||+.++.|+||+|++||++|++|++|+.++.+. .
T Consensus       293 ~~~~~~~~~~l~~~L~-------~~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~  365 (519)
T KOG0159|consen  293 DSAGSEYTGSLLELLL-------RKELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSGN  365 (519)
T ss_pred             cccccchhHHHHHHHH-------HccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCcc
Confidence            221  22233333333       3457889999999999999999999999999999999999999999999999987 6


Q ss_pred             cccccccCCCChhHHHHHHHhhcCCCCCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCCCCCCCCCCCccCCC
Q 015436          242 RWFEEKDIVNLPFIEAIIKETMRLHGAPMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGK  321 (407)
Q Consensus       242 ~~~~~~~~~~lp~L~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~  321 (407)
                      +.++.+++.+||||+||||||+||||+.....|+..+|.+++||.|||||.|.++++.+.+||++|++|++|+|||||++
T Consensus       366 ~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~  445 (519)
T KOG0159|consen  366 SELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKP  445 (519)
T ss_pred             cccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhhccChhhCCCccccChhhhccc
Confidence            88999999999999999999999999444445999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCCCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeEEEeecC
Q 015436          322 SIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVVAQPRL  400 (407)
Q Consensus       322 ~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~  400 (407)
                      +. ...++..++|||.|+|+|+||++|.+|+.++||+|+++|+++..++   .  +.+..+.+++.|..++.++|++|+
T Consensus       446 ~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~---~--pv~~~~~~il~P~~~l~f~f~~r~  518 (519)
T KOG0159|consen  446 ST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHE---E--PVEYVYRFILVPNRPLRFKFRPRN  518 (519)
T ss_pred             cc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCC---C--CccceeEEEEcCCCCcceeeeeCC
Confidence            63 2347889999999999999999999999999999999999999775   2  344456677788999999999986


No 7  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=7.4e-67  Score=497.07  Aligned_cols=382  Identities=33%  Similarity=0.659  Sum_probs=310.3

Q ss_pred             CcceEeCCCChhHHHHHhhhhccCCChHhhhhhHHHHHHHHHHHHHHHHhh--cCCceechHHHHHHHHHHHhHHhhcCc
Q 015436           11 FSNITWSPYGPYFNQARKICTMELFTAKRLKSYEYIRVEELNVLLKHLYES--SGKPIALKDHLADVSLNVISRVVLGKK   88 (407)
Q Consensus        11 ~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~~i~~~~fG~~   88 (407)
                      +..+.+..+++.|+++||.++.++|++.+++.+.+.+.++++++++.|.+.  +++++|+.+.+..+++|++++++||.+
T Consensus       110 ~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~  189 (499)
T PLN03234        110 GRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQAFGKR  189 (499)
T ss_pred             CCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHHHHhCCc
Confidence            445667778899999999865689999999999999999999999999754  567899999999999999999999998


Q ss_pred             ccccccccchhhHHHHHHHHHHHHHhhccccccCccccccccC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 015436           89 YSNERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWLGFLD-LQGNIKRMKAVAKKFDRFLEQVVDEHNARRKGIDNY  167 (407)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  167 (407)
                      ++...     ....++.+.+...............+|++.++. ..+..++..++.+.+.+++.+.++++++....  ..
T Consensus       190 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~  262 (499)
T PLN03234        190 YNEYG-----TEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRP--KQ  262 (499)
T ss_pred             ccccc-----hhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc--CC
Confidence            85432     123455555555444333333344556554321 12234567788888899999999887544321  12


Q ss_pred             CCCcHHHHHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhccCCcccccc
Q 015436          168 VAKDMVDVLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIGKERWFEEK  247 (407)
Q Consensus       168 ~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~  247 (407)
                      ...|+++.++....++.....++++++..++.++++||+|||+++++|++++|++||++|+|+++|+++++++.+.++++
T Consensus       263 ~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~  342 (499)
T PLN03234        263 ETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEE  342 (499)
T ss_pred             CcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHH
Confidence            35789999987654322123689999999999999999999999999999999999999999999999999877778999


Q ss_pred             cCCCChhHHHHHHHhhcCCC-CCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCC-CCCCCCCCCccCCCCCC-
Q 015436          248 DIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALW-ENPNEFCPERFLGKSID-  324 (407)
Q Consensus       248 ~~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~-  324 (407)
                      ++.+||||+|||+|+||++| ++..++|.+.+|++++|+.|||||.|.++++++||||++| +||++|+||||+++... 
T Consensus       343 ~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~  422 (499)
T PLN03234        343 DIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGV  422 (499)
T ss_pred             HHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCc
Confidence            99999999999999999999 7777789999999999999999999999999999999999 89999999999975432 


Q ss_pred             -CCCCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeEEEeec
Q 015436          325 -VKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVVAQPR  399 (407)
Q Consensus       325 -~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R  399 (407)
                       ...+...++|||.|+|.|+|+++|++|+++++|.|+++|+|+++++..+.........++...+++.+.+..++|
T Consensus       423 ~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        423 DFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             CcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence             223466899999999999999999999999999999999999987643334445555677777777888887776


No 8  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=1.2e-66  Score=493.42  Aligned_cols=385  Identities=39%  Similarity=0.739  Sum_probs=312.8

Q ss_pred             CcceEeCCCChhHHHHHhhhhccCCChHhhhhhHHHHHHHHHHHHHHHHhh--cCCceechHHHHHHHHHHHhHHhhcCc
Q 015436           11 FSNITWSPYGPYFNQARKICTMELFTAKRLKSYEYIRVEELNVLLKHLYES--SGKPIALKDHLADVSLNVISRVVLGKK   88 (407)
Q Consensus        11 ~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~~i~~~~fG~~   88 (407)
                      +.+.+++.+|+.|+++||.++.++|++++++.+.+.+.++++.+++.+.+.  +|+++|+.+.+..++.|+|+.++||.+
T Consensus       112 ~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~~~fg~~  191 (504)
T PLN00110        112 AQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQVILSRR  191 (504)
T ss_pred             CCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHHHHhCCc
Confidence            345677778999999999995468999999999999999999999999764  577899999999999999999999998


Q ss_pred             ccccccccchhhHHHHHHHHHHHHHhhccccccCccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC
Q 015436           89 YSNERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWLGFLDLQGNIKRMKAVAKKFDRFLEQVVDEHNARRKGIDNYV  168 (407)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  168 (407)
                      +....    ....+++...+...+.......+.+++|++.++......+...+..+.+.+++.+.++++++....  ...
T Consensus       192 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~  265 (504)
T PLN00110        192 VFETK----GSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHE--RKG  265 (504)
T ss_pred             ccccC----chhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhccc--ccc
Confidence            62211    112356777777666544433344567766554333334556667777888888888877654321  123


Q ss_pred             CCcHHHHHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhccCCccccccc
Q 015436          169 AKDMVDVLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIGKERWFEEKD  248 (407)
Q Consensus       169 ~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~  248 (407)
                      ..|+++.++.....+. +..++++++..++..+++||+|||+++++|++++|++||++|+|+++|+++++++.+.+++++
T Consensus       266 ~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~  344 (504)
T PLN00110        266 NPDFLDVVMANQENST-GEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESD  344 (504)
T ss_pred             CCChhhHHhhcccccC-CCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHH
Confidence            4689999997543221 346899999999999999999999999999999999999999999999999998777789999


Q ss_pred             CCCChhHHHHHHHhhcCCC-CCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCCCCCCCCCCCccCCCCCCCC-
Q 015436          249 IVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDVK-  326 (407)
Q Consensus       249 ~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~-  326 (407)
                      +++||||+|||+||||++| ++..++|.+.+|++++||.|||||.|.++++++||||++|+||++|+||||++.+.... 
T Consensus       345 ~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~  424 (504)
T PLN00110        345 LPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKID  424 (504)
T ss_pred             hhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccc
Confidence            9999999999999999999 77778899999999999999999999999999999999999999999999996432111 


Q ss_pred             --CCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeEEEeecCCCCC
Q 015436          327 --GNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVVAQPRLAPHL  404 (407)
Q Consensus       327 --~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~~~~  404 (407)
                        .+...++|||.|+|.|+|++||++|+++++|.|+++|+|++.++   .++++...+++++.|+.++.+++++|...+-
T Consensus       425 ~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~  501 (504)
T PLN00110        425 PRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDG---VELNMDEAFGLALQKAVPLSAMVTPRLHQSA  501 (504)
T ss_pred             cCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCC---CccCcccccccccccCCCceEeeccCCCchh
Confidence              12357999999999999999999999999999999999998765   2344444466777788899999999974443


Q ss_pred             C
Q 015436          405 Y  405 (407)
Q Consensus       405 ~  405 (407)
                      |
T Consensus       502 ~  502 (504)
T PLN00110        502 Y  502 (504)
T ss_pred             c
Confidence            3


No 9  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=2.2e-66  Score=495.21  Aligned_cols=391  Identities=37%  Similarity=0.688  Sum_probs=315.8

Q ss_pred             ceEeCCCChhHHHHHhhhhccCCChHhhhhhHHHHHHHHHHHHHHHHhh--cCCceechHHHHHHHHHHHhHHhhcCccc
Q 015436           13 NITWSPYGPYFNQARKICTMELFTAKRLKSYEYIRVEELNVLLKHLYES--SGKPIALKDHLADVSLNVISRVVLGKKYS   90 (407)
Q Consensus        13 ~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~~i~~~~fG~~~~   90 (407)
                      +.++..+|+.|+++||.+.+++|+.++++.+.+.+.++++.+++.+.+.  +++++|+.+.+..+++++++.++||.++.
T Consensus       115 ~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~  194 (514)
T PLN03112        115 DVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNNVTRMLLGKQYF  194 (514)
T ss_pred             ceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHHHHHHHHHcCCccc
Confidence            4567778999999999975679999999999999999999999987654  46789999999999999999999999874


Q ss_pred             ccccccchhhHHHHHHHHHHHHHhhccccccCccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CCCC
Q 015436           91 NERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWLGFLDLQGNIKRMKAVAKKFDRFLEQVVDEHNARRKGID-NYVA  169 (407)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~  169 (407)
                      ..... ......++...+..+...........++|++.++.+.+..++..+..+.+.+++.+.++++++..+... ....
T Consensus       195 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  273 (514)
T PLN03112        195 GAESA-GPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRARSGKLPGGKD  273 (514)
T ss_pred             ccccc-chHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcc
Confidence            32210 011235566666666554433334456676655433333456677788888888888888776542211 1234


Q ss_pred             CcHHHHHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhccCCcccccccC
Q 015436          170 KDMVDVLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIGKERWFEEKDI  249 (407)
Q Consensus       170 ~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~  249 (407)
                      .|+++.+++...+++ ...++++++.+++..+++||+|||+++++|++++|++||++|+||++|+++++++++.++++++
T Consensus       274 ~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l  352 (514)
T PLN03112        274 MDFVDVLLSLPGENG-KEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDL  352 (514)
T ss_pred             chHHHHHHHhhcccc-ccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCChhhh
Confidence            689999998654321 2358999999999999999999999999999999999999999999999999987777899999


Q ss_pred             CCChhHHHHHHHhhcCCC-CCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCCCCCCCCCCCccCCCCCC---C
Q 015436          250 VNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSID---V  325 (407)
Q Consensus       250 ~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~---~  325 (407)
                      ++||||+|||+|++|+|| ++..++|.+.+|++++|+.|||||.|.++++++||||++|+||++|+||||+++...   .
T Consensus       353 ~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~  432 (514)
T PLN03112        353 VHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEI  432 (514)
T ss_pred             ccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCcccc
Confidence            999999999999999999 777778999999999999999999999999999999999999999999998653211   1


Q ss_pred             -CCCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeEEEeecCCCCC
Q 015436          326 -KGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVVAQPRLAPHL  404 (407)
Q Consensus       326 -~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~~~~  404 (407)
                       ......++|||.|+|.|+|++||++|++++++.|+++|+|+++.+.....+.+...+++.++++.+++++++||...|+
T Consensus       433 ~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~  512 (514)
T PLN03112        433 SHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPRLAPHL  512 (514)
T ss_pred             ccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEeecCCcccc
Confidence             1134579999999999999999999999999999999999987553222334444556676777899999999999988


Q ss_pred             C
Q 015436          405 Y  405 (407)
Q Consensus       405 ~  405 (407)
                      |
T Consensus       513 ~  513 (514)
T PLN03112        513 Y  513 (514)
T ss_pred             c
Confidence            7


No 10 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1.8e-65  Score=486.82  Aligned_cols=384  Identities=32%  Similarity=0.618  Sum_probs=297.4

Q ss_pred             cCCcceEeCCCChhHHHHHhhhhccCCChHhhhhhHHHHHHHHHHHHHHHHhh--cCCceechHHHHHHHHHHHhHHhhc
Q 015436            9 YNFSNITWSPYGPYFNQARKICTMELFTAKRLKSYEYIRVEELNVLLKHLYES--SGKPIALKDHLADVSLNVISRVVLG   86 (407)
Q Consensus         9 ~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~~i~~~~fG   86 (407)
                      .+..++.+..+|+.|+++|+++++++|++.+++.+.+.+.++++.+++.|.+.  +++++|+.+.+..+++|+++.++||
T Consensus       109 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~~~~fG  188 (502)
T PLN02966        109 YGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQAFG  188 (502)
T ss_pred             cCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHHHHHhC
Confidence            33344666777999999999954799999999999999999999999999764  4668999999999999999999999


Q ss_pred             CcccccccccchhhHHHHHHHHHHHHHhhccccccCccccccccC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Q 015436           87 KKYSNERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWLGFLD-LQGNIKRMKAVAKKFDRFLEQVVDEHNARRKGID  165 (407)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  165 (407)
                      .+++...     .....+.+.+..............++|++..+. ..+..+......+...+++.+.+++......  .
T Consensus       189 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~  261 (502)
T PLN02966        189 KKYNEDG-----EEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKR--V  261 (502)
T ss_pred             CccCccc-----hHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccc--c
Confidence            9885432     122445555555444433333344556433221 1111233344555666667777766544321  1


Q ss_pred             CCCCCcHHHHHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhccC--Ccc
Q 015436          166 NYVAKDMVDVLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIGK--ERW  243 (407)
Q Consensus       166 ~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~--~~~  243 (407)
                      .....++++.+++..+++.....++++++..++.++++||+|||+++++|++++|++||++|+|+++|++++++.  .+.
T Consensus       262 ~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~  341 (502)
T PLN02966        262 KPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTF  341 (502)
T ss_pred             ccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCc
Confidence            123468999999766543213458999999999999999999999999999999999999999999999999874  245


Q ss_pred             cccccCCCChhHHHHHHHhhcCCC-CCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCC-CCCCCCCCCccCCC
Q 015436          244 FEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALW-ENPNEFCPERFLGK  321 (407)
Q Consensus       244 ~~~~~~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~  321 (407)
                      ++++++++||||+|||+|+||++| ++..++|.+.+|++++|+.|||||.|.++++++||||++| |||++|+||||+++
T Consensus       342 ~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~  421 (502)
T PLN02966        342 VTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEK  421 (502)
T ss_pred             CCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCC
Confidence            799999999999999999999999 7777789999999999999999999999999999999999 99999999999965


Q ss_pred             CCCCCCCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeEEEeec
Q 015436          322 SIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVVAQPR  399 (407)
Q Consensus       322 ~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R  399 (407)
                      +.+.......|+|||.|+|.|+|++||++|+++++|.|+++|+|++.++.....+++....++...++..+++..++-
T Consensus       422 ~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (502)
T PLN02966        422 EVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLVPEKV  499 (502)
T ss_pred             CCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeEEEEEeC
Confidence            432223456899999999999999999999999999999999999877643333444444455554444565555443


No 11 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=1.5e-65  Score=489.00  Aligned_cols=386  Identities=23%  Similarity=0.395  Sum_probs=300.4

Q ss_pred             ccccCCcceEeCCCChhHHHHHhhhhccCCChHhhhhhHHHHHHHHHHHHHHHHhh--cCCceechHHHHHHHHHHHhHH
Q 015436            6 YTGYNFSNITWSPYGPYFNQARKICTMELFTAKRLKSYEYIRVEELNVLLKHLYES--SGKPIALKDHLADVSLNVISRV   83 (407)
Q Consensus         6 ~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~~i~~~   83 (407)
                      +++.++..+.++.+|+.|+++||.+.+++|+.++++.+.+.+.++++.+++.|.+.  .++.+|+.+.+..++.++++.+
T Consensus       114 ~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii~~~  193 (519)
T PLN00168        114 LLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLLVLM  193 (519)
T ss_pred             hhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHH
Confidence            34433223444577999999998655899999999999999999999999999765  3457899999999999999999


Q ss_pred             hhcCcccccccccchhhHHHHHHHHHHHHHhh-ccccccCccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 015436           84 VLGKKYSNERQNGIEITRHELKEMIDELILLN-GVFDIGDSIPWLGFLDLQGNIKRMKAVAKKFDRFLEQVVDEHNARRK  162 (407)
Q Consensus        84 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  162 (407)
                      +||.+++...       ...+......+.... .......++|++.+.......++..+..+.+.+++..+++++++...
T Consensus       194 ~fG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  266 (519)
T PLN00168        194 CFGERLDEPA-------VRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKN  266 (519)
T ss_pred             HcCCCcChhh-------HHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999874321       123333333332211 22233455665433222222345556777888888888888765431


Q ss_pred             c---CC--C----CCCCcHHHHHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHH
Q 015436          163 G---ID--N----YVAKDMVDVLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEE  233 (407)
Q Consensus       163 ~---~~--~----~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~E  233 (407)
                      .   .+  .    ....|+++.|++....+..+..++++++..++.++++||+|||+++++|++++|++||++|+|+++|
T Consensus       267 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~E  346 (519)
T PLN00168        267 HLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDE  346 (519)
T ss_pred             hccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            1   00  0    1145899999976532221346999999999999999999999999999999999999999999999


Q ss_pred             HHHhccCC-cccccccCCCChhHHHHHHHhhcCCC-CCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCCCCCC
Q 015436          234 LDRVIGKE-RWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALWENPN  311 (407)
Q Consensus       234 i~~~~~~~-~~~~~~~~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  311 (407)
                      |++++++. +.++++++.+||||+|||+|+||+|| ++..++|.+.+|++++|+.|||||.|.++++++||||++|+||+
T Consensus       347 i~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~  426 (519)
T PLN00168        347 IKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPM  426 (519)
T ss_pred             HHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCcc
Confidence            99999753 56899999999999999999999999 77777899999999999999999999999999999999999999


Q ss_pred             CCCCCccCCCCCC-----CCCCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccc
Q 015436          312 EFCPERFLGKSID-----VKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLAN  386 (407)
Q Consensus       312 ~F~P~R~l~~~~~-----~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (407)
                      +|+||||++....     ...+...|+|||.|+|+|+|++||++|++++++.|+++|+|++.++.   ++++....++++
T Consensus       427 ~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~  503 (519)
T PLN00168        427 EFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGD---EVDFAEKREFTT  503 (519)
T ss_pred             ccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCC---cCChhhhceeEE
Confidence            9999999964211     11234579999999999999999999999999999999999987652   233332334555


Q ss_pred             cccCCeeEEEeecCC
Q 015436          387 QKKIPLEVVAQPRLA  401 (407)
Q Consensus       387 ~~~~~~~v~~~~R~~  401 (407)
                      .++.++.|++++|+.
T Consensus       504 ~~~~~~~~~~~~R~~  518 (519)
T PLN00168        504 VMAKPLRARLVPRRT  518 (519)
T ss_pred             eecCCcEEEEEeccC
Confidence            666789999999975


No 12 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=3.1e-65  Score=486.42  Aligned_cols=380  Identities=31%  Similarity=0.530  Sum_probs=289.9

Q ss_pred             CcceEeCCCChhHHHHHhhhhccCCChHhhhhhHHHHHHHHHHHHHHHHhh---cCCceechHHHHHHHHHHHhHHhhcC
Q 015436           11 FSNITWSPYGPYFNQARKICTMELFTAKRLKSYEYIRVEELNVLLKHLYES---SGKPIALKDHLADVSLNVISRVVLGK   87 (407)
Q Consensus        11 ~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~---~~~~vd~~~~~~~~~~~~i~~~~fG~   87 (407)
                      +.+.+++.+|+.|+++||.+..++|+++.++.+.+.+.++++.+++.|.+.   +++.+|+.+.+..+++|+++.++||.
T Consensus       112 ~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~~~fG~  191 (503)
T PLN02394        112 GQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYRMMFDR  191 (503)
T ss_pred             CCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHHHHHhCC
Confidence            445677778999999999985589999999999999999999999999764   24569999999999999999999999


Q ss_pred             cccccccccchhhHHHHHHHHHHHHHhhcc--ccccCccccccccCccchHHHHHHHHHHHHH-HHHHHHHHHHHHHccC
Q 015436           88 KYSNERQNGIEITRHELKEMIDELILLNGV--FDIGDSIPWLGFLDLQGNIKRMKAVAKKFDR-FLEQVVDEHNARRKGI  164 (407)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~  164 (407)
                      +++...    +.....+.............  .....++|++.... ....+........... +....++++++..+..
T Consensus       192 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  266 (503)
T PLN02394        192 RFESED----DPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFL-RGYLKICQDVKERRLALFKDYFVDERKKLMSAK  266 (503)
T ss_pred             Cccccc----chhHHHHHHHHHHHHHHhcccccchhhhchHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            985432    11222333333322222221  11233455443321 1111222222222222 2233455554432111


Q ss_pred             --CCCCCCcHHHHHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhccCCc
Q 015436          165 --DNYVAKDMVDVLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIGKER  242 (407)
Q Consensus       165 --~~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~  242 (407)
                        +.....|+++.+++...    .+.++++++..++.++++||+|||+++++|++++|++||++|+||++||+++++.+.
T Consensus       267 ~~~~~~~~d~l~~ll~~~~----~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~  342 (503)
T PLN02394        267 GMDKEGLKCAIDHILEAQK----KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGN  342 (503)
T ss_pred             cCCcchhhhHHHHHHhccc----cCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC
Confidence              11234689999998654    235899999999999999999999999999999999999999999999999998766


Q ss_pred             ccccccCCCChhHHHHHHHhhcCCC-CCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCCCCCCCCCCCccCCC
Q 015436          243 WFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGK  321 (407)
Q Consensus       243 ~~~~~~~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~  321 (407)
                      .++++++.+||||+|||+|+||++| ++..++|.+.+|++++|+.||+||.|.+++|++||||++|+||++|+||||+++
T Consensus       343 ~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~  422 (503)
T PLN02394        343 QVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEE  422 (503)
T ss_pred             CCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCC
Confidence            7899999999999999999999999 888888999999999999999999999999999999999999999999999965


Q ss_pred             CCC--CCCCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCcccccc-ccccccCCeeEEEee
Q 015436          322 SID--VKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFK-LANQKKIPLEVVAQP  398 (407)
Q Consensus       322 ~~~--~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~  398 (407)
                      +.+  .......++|||.|+|+|+|++||++|+++++|.|+++|+|++.++.+  .++....++ +.+..+.++.|++.+
T Consensus       423 ~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  500 (503)
T PLN02394        423 EAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQS--KIDVSEKGGQFSLHIAKHSTVVFKP  500 (503)
T ss_pred             CCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCC--cCccccccCceeeccCCCceEEeec
Confidence            432  122456899999999999999999999999999999999999876631  233333332 444345699999999


Q ss_pred             cCC
Q 015436          399 RLA  401 (407)
Q Consensus       399 R~~  401 (407)
                      |+.
T Consensus       501 r~~  503 (503)
T PLN02394        501 RSA  503 (503)
T ss_pred             CCC
Confidence            974


No 13 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=4.9e-65  Score=482.54  Aligned_cols=370  Identities=23%  Similarity=0.345  Sum_probs=290.1

Q ss_pred             CcceEeCCCChhHHHHHhhhhccCCChHhhhhhHHHHHHHHHHHHHHHHhh--cCCceechHHHHHHHHHHHhHHhhcCc
Q 015436           11 FSNITWSPYGPYFNQARKICTMELFTAKRLKSYEYIRVEELNVLLKHLYES--SGKPIALKDHLADVSLNVISRVVLGKK   88 (407)
Q Consensus        11 ~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~~i~~~~fG~~   88 (407)
                      +.|++++ +|+.|+++|+++ .+.|+..+++.+.+.+.+.++.+++.|.+.  .++.+|+.+.+..+++|+++.++||.+
T Consensus       109 ~~~l~~~-~g~~w~~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~  186 (482)
T PTZ00404        109 YHGIVTS-SGEYWKRNREIV-GKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKYIFNED  186 (482)
T ss_pred             CCceecc-ChHHHHHHHHHH-HHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHhccc
Confidence            4566555 699999999999 699999999999999999999999999764  467799999999999999999999998


Q ss_pred             ccccccccchhhHHHHHHHHHHHHHhhccccccCccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC
Q 015436           89 YSNERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWLGFLDLQGNIKRMKAVAKKFDRFLEQVVDEHNARRKGIDNYV  168 (407)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  168 (407)
                      ++..+. ..++....+...+..++..........+++++..... ...+...+..+.+.+++.+.++++++..   +...
T Consensus       187 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~  261 (482)
T PTZ00404        187 ISFDED-IHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYY-QYLEHTDKNFKKIKKFIKEKYHEHLKTI---DPEV  261 (482)
T ss_pred             cccccc-cchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHcc---CCCC
Confidence            754221 0011224566666666554333222233333322111 1122233455666677776666654432   1223


Q ss_pred             CCcHHHHHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhccCCccccccc
Q 015436          169 AKDMVDVLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIGKERWFEEKD  248 (407)
Q Consensus       169 ~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~  248 (407)
                      .+|+++.+++...+.   ...+.+++++++..+++||+|||+++++|++++|++||++|+||++|+++++++...+++++
T Consensus       262 ~~dll~~ll~~~~~~---~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~  338 (482)
T PTZ00404        262 PRDLLDLLIKEYGTN---TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSD  338 (482)
T ss_pred             cccHHHHHHHHhccC---CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCccc
Confidence            578999999764321   12223458889999999999999999999999999999999999999999998766789999


Q ss_pred             CCCChhHHHHHHHhhcCCC-CCCCCcceeecceee-cceeeCCCCEEEecchhhccCCCCCCCCCCCCCCccCCCCCCCC
Q 015436          249 IVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKV-AAYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDVK  326 (407)
Q Consensus       249 ~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~-~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~  326 (407)
                      +.+||||+|||+|+||||| ++..++|.+.+|+++ +|+.|||||.|.++++++||||++||||++|+||||++..    
T Consensus       339 l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~----  414 (482)
T PTZ00404        339 RQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD----  414 (482)
T ss_pred             cccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC----
Confidence            9999999999999999999 777778999999999 9999999999999999999999999999999999998642    


Q ss_pred             CCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeEEEeec
Q 015436          327 GNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVVAQPR  399 (407)
Q Consensus       327 ~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R  399 (407)
                       ....|+|||.|+|.|+|++||++|++++++.|+++|+|+.+++.   +.......++++. +.+++|++++|
T Consensus       415 -~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        415 -SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGK---KIDETEEYGLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             -CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCC---CCCcccccceeec-CCCceeeeecC
Confidence             34689999999999999999999999999999999999986552   2222223455555 56899999987


No 14 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.4e-64  Score=483.19  Aligned_cols=368  Identities=23%  Similarity=0.371  Sum_probs=293.9

Q ss_pred             CcceEeCCCChhHHHHHhhhhccCCChHhhhhhHHHHHHHHHHHHHHHHhh---cCCceechHHHHHHHHHHHhHHhhcC
Q 015436           11 FSNITWSPYGPYFNQARKICTMELFTAKRLKSYEYIRVEELNVLLKHLYES---SGKPIALKDHLADVSLNVISRVVLGK   87 (407)
Q Consensus        11 ~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~---~~~~vd~~~~~~~~~~~~i~~~~fG~   87 (407)
                      |.+++++ +|+.|+++||++ .+.|+.++++.+.+.+.++++.+++.|.+.   ++..+|+.+.+..+++|++++++||.
T Consensus       141 g~~l~~~-~g~~Wk~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~  218 (516)
T PLN02290        141 GRGLLMA-NGADWYHQRHIA-APAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTEVEIGEYMTRLTADIISRTEFDS  218 (516)
T ss_pred             cCCcccc-CchHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEhHHHHHHHHHHHHHHHHcCC
Confidence            4566555 599999999999 699999999999999999999999999764   23589999999999999999999999


Q ss_pred             cccccccccchhhHHHHHHHHHHHHHhhccccccCccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHccC-CC
Q 015436           88 KYSNERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWLGFLDLQGNIKRMKAVAKKFDRFLEQVVDEHNARRKGI-DN  166 (407)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~  166 (407)
                      +++..         +++...+..+............+|++.+++ .+..+......+.+.+++.+.|+++++....+ ..
T Consensus       219 ~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  288 (516)
T PLN02290        219 SYEKG---------KQIFHLLTVLQRLCAQATRHLCFPGSRFFP-SKYNREIKSLKGEVERLLMEIIQSRRDCVEIGRSS  288 (516)
T ss_pred             ccccc---------hHHHHHHHHHHHHHHHhhhhhcCchhhhCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Confidence            87432         222223322222211111112345444432 22334566677788888899998887654321 11


Q ss_pred             CCCCcHHHHHHHhcCCC-CcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhccCCcccc
Q 015436          167 YVAKDMVDVLLLLADDP-TLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIGKERWFE  245 (407)
Q Consensus       167 ~~~~d~~~~ll~~~~~~-~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~  245 (407)
                      ....|+++.+++...+. ..+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++++ .++
T Consensus       289 ~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~  367 (516)
T PLN02290        289 SYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPS  367 (516)
T ss_pred             CCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCC
Confidence            23578999999765422 1123478899999999999999999999999999999999999999999999999864 789


Q ss_pred             cccCCCChhHHHHHHHhhcCCC-CCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCC-CCCCCCCCCccCCCCC
Q 015436          246 EKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALW-ENPNEFCPERFLGKSI  323 (407)
Q Consensus       246 ~~~~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~  323 (407)
                      ++++++||||+|||+||||++| ++ .++|.+.+|++++|+.|||||.|.++.+++||||++| +||++|+||||++...
T Consensus       368 ~~~l~~lpYl~avi~EtlRl~p~~~-~~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~  446 (516)
T PLN02290        368 VDHLSKLTLLNMVINESLRLYPPAT-LLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF  446 (516)
T ss_pred             HHHHhcChHHHHHHHHHHHcCCCcc-ccceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCCC
Confidence            9999999999999999999999 66 4689999999999999999999999999999999999 8999999999995321


Q ss_pred             CCCCCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeEEEeecC
Q 015436          324 DVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVVAQPRL  400 (407)
Q Consensus       324 ~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~  400 (407)
                         .....|+|||.|+|.|+|++||++|++++++.|+++|+|+++++.   +  ......+++.|++++.|++++|+
T Consensus       447 ---~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~---~--~~~~~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        447 ---APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNY---R--HAPVVVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             ---CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCc---c--cCccceeeecCCCCCeEEEEeCC
Confidence               134579999999999999999999999999999999999987652   1  11123567788899999999986


No 15 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=5.6e-64  Score=476.06  Aligned_cols=392  Identities=27%  Similarity=0.442  Sum_probs=294.3

Q ss_pred             cccCCcceEeCCCChhHHHHHhhhhccCC-ChHhhhhhHHHHHHHHHHHHHHHHhh--cCCceechHHHHHHHHHHHhHH
Q 015436            7 TGYNFSNITWSPYGPYFNQARKICTMELF-TAKRLKSYEYIRVEELNVLLKHLYES--SGKPIALKDHLADVSLNVISRV   83 (407)
Q Consensus         7 ~~~~~~~~~~~~~g~~w~~~Rr~~~~~~f-s~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~~i~~~   83 (407)
                      ++.++.+++++.+|+.|+++||++. +.| +....+.+.+.+..+++.+++.+.+.  .++++|+.+.+..+++++++++
T Consensus       120 l~~~~~~i~~~~~G~~Wk~~Rk~l~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~  198 (534)
T PLN03018        120 IGDNYKSMGTSPYGEQFMKMKKVIT-TEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRM  198 (534)
T ss_pred             hccCCCceEecCCCHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHHH
Confidence            4444456888888999999999995 554 55555556667667899999999763  4567999999999999999999


Q ss_pred             hhcCcccccccc--cchhhHHHHHHHHHHHHH---hhccccccCccc-cccccCccchHHHHHHHHHHHHHHHHHHHHHH
Q 015436           84 VLGKKYSNERQN--GIEITRHELKEMIDELIL---LNGVFDIGDSIP-WLGFLDLQGNIKRMKAVAKKFDRFLEQVVDEH  157 (407)
Q Consensus        84 ~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  157 (407)
                      +||.+++.....  ........+...+.....   ........+++| |+++....+...+.......+.+++.+.++++
T Consensus       199 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  278 (534)
T PLN03018        199 LFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDER  278 (534)
T ss_pred             HhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            999987432110  000111112222222221   111112223344 54432222233445556667788888888887


Q ss_pred             HHHHccCCC-CCCCcHHHHHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHH
Q 015436          158 NARRKGIDN-YVAKDMVDVLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDR  236 (407)
Q Consensus       158 ~~~~~~~~~-~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~  236 (407)
                      ++....... ....|+++.++....+++ ...+++++++.++.++++||+|||+++++|++++|++||++|+|+++||++
T Consensus       279 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~  357 (534)
T PLN03018        279 VELWREKGGKAAVEDWLDTFITLKDQNG-KYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDE  357 (534)
T ss_pred             HHHhhhccCCCCcccHHHHHHHhhcccC-CCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence            654321111 234689999997654321 124899999999999999999999999999999999999999999999999


Q ss_pred             hccCCcccccccCCCChhHHHHHHHhhcCCC-CCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCCCCCCCCCC
Q 015436          237 VIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALWENPNEFCP  315 (407)
Q Consensus       237 ~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P  315 (407)
                      +++.++.++.+++.+||||+|||+|+||++| ++...+|.+.+|++++|+.|||||.|.++++++||||++|+||++|+|
T Consensus       358 v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~P  437 (534)
T PLN03018        358 VVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEP  437 (534)
T ss_pred             HhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccccCC
Confidence            9987777899999999999999999999999 777778999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCCC-----CCCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccC
Q 015436          316 ERFLGKSIDV-----KGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKI  390 (407)
Q Consensus       316 ~R~l~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (407)
                      |||++.++..     ......++|||.|+|.|+|++||++|+++++|+|+++|+|++.++.  .+++.....+++.. +.
T Consensus       438 eRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~-p~  514 (534)
T PLN03018        438 ERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDF--GPLSLEEDDASLLM-AK  514 (534)
T ss_pred             ccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCC--CCCCccccccceec-CC
Confidence            9999643211     1245689999999999999999999999999999999999986542  12333323344443 56


Q ss_pred             CeeEEEeecCCCC
Q 015436          391 PLEVVAQPRLAPH  403 (407)
Q Consensus       391 ~~~v~~~~R~~~~  403 (407)
                      +++|++++|....
T Consensus       515 ~~~v~~~~R~~~~  527 (534)
T PLN03018        515 PLLLSVEPRLAPN  527 (534)
T ss_pred             CeEEEEEeccccc
Confidence            9999999995443


No 16 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=2.1e-64  Score=475.15  Aligned_cols=381  Identities=25%  Similarity=0.446  Sum_probs=301.6

Q ss_pred             cccCCcceEeCCCChhHHHHHhhhhccCCChHhhhhhHHHHHHHHHHHHHHHHhh----cCCceechHHHHHHHHHHHhH
Q 015436            7 TGYNFSNITWSPYGPYFNQARKICTMELFTAKRLKSYEYIRVEELNVLLKHLYES----SGKPIALKDHLADVSLNVISR   82 (407)
Q Consensus         7 ~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~----~~~~vd~~~~~~~~~~~~i~~   82 (407)
                      +++++.+++++++|+.|+++||.+..++|+..+++.+.+.+.+.++.+++.+.+.    .++++|+.+.+..+++|+++.
T Consensus        77 ~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~  156 (466)
T PLN02655         77 LTRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLI  156 (466)
T ss_pred             HhcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHH
Confidence            3444445777778999999999886788998888999999999999988888653    467899999999999999999


Q ss_pred             HhhcCcccccccccchh---hHHHHHHHHHHHHHhhccccccCccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 015436           83 VVLGKKYSNERQNGIEI---TRHELKEMIDELILLNGVFDIGDSIPWLGFLDLQGNIKRMKAVAKKFDRFLEQVVDEHNA  159 (407)
Q Consensus        83 ~~fG~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  159 (407)
                      ++||.+++.........   ....+...+..++.......+.+++|++++++.....+...+....+.++++.+++++++
T Consensus       157 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  236 (466)
T PLN02655        157 QALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKK  236 (466)
T ss_pred             HHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999875432100000   012234444444444333334567777666543322333444444556777788877765


Q ss_pred             HHccCCCCCCCcHHHHHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhcc
Q 015436          160 RRKGIDNYVAKDMVDVLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIG  239 (407)
Q Consensus       160 ~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~  239 (407)
                      ....  .....|+++.++...      ..++++++..++.++++||+|||+++++|++++|++||++|+|+++|++++++
T Consensus       237 ~~~~--~~~~~d~l~~ll~~~------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~  308 (466)
T PLN02655        237 RIAR--GEERDCYLDFLLSEA------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCG  308 (466)
T ss_pred             hhcC--CCCcccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhC
Confidence            5322  123468999999753      25899999999999999999999999999999999999999999999999998


Q ss_pred             CCcccccccCCCChhHHHHHHHhhcCCC-CCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCCCCCCCCCCCcc
Q 015436          240 KERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALWENPNEFCPERF  318 (407)
Q Consensus       240 ~~~~~~~~~~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~  318 (407)
                      +.. ++++++.++|||+|||+|+||++| ++...+|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||
T Consensus       309 ~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~  387 (466)
T PLN02655        309 DER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERF  387 (466)
T ss_pred             CCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCcccc
Confidence            654 899999999999999999999999 777778999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeEEEee
Q 015436          319 LGKSIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVVAQP  398 (407)
Q Consensus       319 l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  398 (407)
                      ++..... .....++|||.|+|.|+|++||++|+++++++|+++|+|++.++.   . +.....++++.++.++.|++++
T Consensus       388 ~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~  462 (466)
T PLN02655        388 LGEKYES-ADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGD---E-EKEDTVQLTTQKLHPLHAHLKP  462 (466)
T ss_pred             CCCCccc-CCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCC---c-cccchhheeEeecCCcEEEEee
Confidence            9754221 234689999999999999999999999999999999999987653   1 1223456667788899999999


Q ss_pred             cCC
Q 015436          399 RLA  401 (407)
Q Consensus       399 R~~  401 (407)
                      |.+
T Consensus       463 r~~  465 (466)
T PLN02655        463 RGS  465 (466)
T ss_pred             cCC
Confidence            864


No 17 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=2.7e-64  Score=476.51  Aligned_cols=371  Identities=16%  Similarity=0.245  Sum_probs=284.7

Q ss_pred             CCcceEeCCCChhHHHHHhhhhccCCChHhhhh--hHHHHHHHHHHHHHHHHhh--cCCceechHHHHHHHHHHHhHHhh
Q 015436           10 NFSNITWSPYGPYFNQARKICTMELFTAKRLKS--YEYIRVEELNVLLKHLYES--SGKPIALKDHLADVSLNVISRVVL   85 (407)
Q Consensus        10 ~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~--~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~~i~~~~f   85 (407)
                      .|+|+++++ |+.|+++||++ +++|+...++.  +.+.+.++++.+++.+.+.  .++.+|+.+.+..+++|++++++|
T Consensus       115 ~g~gl~~~~-g~~Wr~~Rk~l-~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~~f  192 (500)
T PLN02169        115 LGEGILTVD-FELWEDLRKSN-HALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTSSILMT  192 (500)
T ss_pred             hcCcccccC-cHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHHHhhee
Confidence            357888776 99999999999 69999887764  3467778888888888754  467899999999999999999999


Q ss_pred             cCcccccccccchhhHHHHHHHHHHHHHhhccccccCccccccc----cCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015436           86 GKKYSNERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWLGF----LDLQGNIKRMKAVAKKFDRFLEQVVDEHNARR  161 (407)
Q Consensus        86 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  161 (407)
                      |.+.+.....   ....++...+........   ...+.|++.+    +...+..++..+..+.+.+++.+.|+++++..
T Consensus       193 G~~~~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~  266 (500)
T PLN02169        193 GYDPMSLSIE---MLEVEFGEAADIGEEAIY---YRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKEE  266 (500)
T ss_pred             CCCccccCCC---CCCCHHHHHHHHHHHHHH---hHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9977432210   011234444333322111   1112232211    11223356677888899999999998887643


Q ss_pred             ccC--CCCCCCcHHHHHHHhcCCC-CcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhc
Q 015436          162 KGI--DNYVAKDMVDVLLLLADDP-TLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVI  238 (407)
Q Consensus       162 ~~~--~~~~~~d~~~~ll~~~~~~-~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~  238 (407)
                      .+.  .....+|+++.+++....+ .....++++++.+++.++++||+|||+++++|++++|++||++|+||++||++++
T Consensus       267 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~  346 (500)
T PLN02169        267 ISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF  346 (500)
T ss_pred             hccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC
Confidence            211  1122468999998764321 1012478889999999999999999999999999999999999999999999864


Q ss_pred             cCCcccccccCCCChhHHHHHHHhhcCCC-CCCCCcceeeccee-ecceeeCCCCEEEecchhhccCCCCC-CCCCCCCC
Q 015436          239 GKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCK-VAAYDILKGTQVLVNTWTIERDPALW-ENPNEFCP  315 (407)
Q Consensus       239 ~~~~~~~~~~~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~-~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P  315 (407)
                            +++++.+||||+|||+||||||| ++... |.+.+|.+ ++|+.|||||.|.+++|++||||++| +||++|+|
T Consensus       347 ------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~P  419 (500)
T PLN02169        347 ------DNEDLEKLVYLHAALSESMRLYPPLPFNH-KAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKP  419 (500)
T ss_pred             ------CHHHHhcCHHHHHHHHHHHhcCCCCCcCc-eecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCc
Confidence                  57899999999999999999999 77776 66655544 59999999999999999999999999 89999999


Q ss_pred             CccCCCCCCCC-CCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeE
Q 015436          316 ERFLGKSIDVK-GNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEV  394 (407)
Q Consensus       316 ~R~l~~~~~~~-~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  394 (407)
                      |||++++++.. .....|+|||+|+|.|+|++||++|+++++|.|+++|+|+++++.   +.  .....+++.|+.++.|
T Consensus       420 eRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~---~~--~~~~~~~l~~~~gl~l  494 (500)
T PLN02169        420 ERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGH---KI--EAIPSILLRMKHGLKV  494 (500)
T ss_pred             cccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCC---Cc--ccccceEEecCCCEEE
Confidence            99996543321 236789999999999999999999999999999999999987542   22  2234567788899999


Q ss_pred             EEeecC
Q 015436          395 VAQPRL  400 (407)
Q Consensus       395 ~~~~R~  400 (407)
                      ++++|.
T Consensus       495 ~l~~~~  500 (500)
T PLN02169        495 TVTKKI  500 (500)
T ss_pred             EEEeCC
Confidence            999883


No 18 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=8.5e-64  Score=479.90  Aligned_cols=372  Identities=19%  Similarity=0.337  Sum_probs=285.7

Q ss_pred             CcceEeCCCChhHHHHHhhhhccCCChHhhhhhHHHHHHHHHHHHHHHHhh--cCCceechHHHHHHHHHHHhHHhhcCc
Q 015436           11 FSNITWSPYGPYFNQARKICTMELFTAKRLKSYEYIRVEELNVLLKHLYES--SGKPIALKDHLADVSLNVISRVVLGKK   88 (407)
Q Consensus        11 ~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~~i~~~~fG~~   88 (407)
                      +.++++. +|+.|+++|+.+ .+.|+...++.+++.+.++++.++++|.+.  .++++|+...+..+++|+|+.++||.+
T Consensus       211 g~~l~~~-dge~wr~rRr~l-~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~  288 (633)
T PLN02738        211 GKGLIPA-DGEIWRVRRRAI-VPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYD  288 (633)
T ss_pred             CCceecC-CcHHHHHHHHhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCC
Confidence            4566654 599999999999 699999999999999999999999999875  577999999999999999999999999


Q ss_pred             ccccccccchhhHHHHHHHHHHHHHhhccccccCcccccccc--CccchHHHHHHHHHHHHHHHHHHHHHHHHHHccC--
Q 015436           89 YSNERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWLGFL--DLQGNIKRMKAVAKKFDRFLEQVVDEHNARRKGI--  164 (407)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--  164 (407)
                      ++....  .    +.+...+..............+.+|...+  ......++..+..+.+..++..+++.+++..++.  
T Consensus       289 ~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~  362 (633)
T PLN02738        289 FDSLSN--D----TGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEEL  362 (633)
T ss_pred             cccccc--c----hHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            864321  0    12222222222211100111112232111  0111123444555556666666665543321110  


Q ss_pred             ------CCCCCCcHHHHHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhc
Q 015436          165 ------DNYVAKDMVDVLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVI  238 (407)
Q Consensus       165 ------~~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~  238 (407)
                            ......++++.|+...      ..++++++.+++..+++||+|||+.+|+|++++|++||++|+||++|+++++
T Consensus       363 ~~~~~~~~~~~~dil~~Ll~~~------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~  436 (633)
T PLN02738        363 QFHEEYMNERDPSILHFLLASG------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVL  436 (633)
T ss_pred             cchhcccccccchHHHHHHHcC------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhc
Confidence                  0123457999888642      2578999999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccccCCCChhHHHHHHHhhcCCC-CCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCCCCCCCCCCCc
Q 015436          239 GKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALWENPNEFCPER  317 (407)
Q Consensus       239 ~~~~~~~~~~~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R  317 (407)
                      ++ +.++++++++||||+|||+|+||||| ++.. .|.+.+|.+++||.|||||.|.+++|.+||||++||||++|+|||
T Consensus       437 ~~-~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~-~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PER  514 (633)
T PLN02738        437 GD-RFPTIEDMKKLKYTTRVINESLRLYPQPPVL-IRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPER  514 (633)
T ss_pred             CC-CCCCHHHHccCHHHHHHHHHHHhcCCCcccc-ceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCccc
Confidence            84 66899999999999999999999999 6665 588999999999999999999999999999999999999999999


Q ss_pred             cCCCCC--CCCCCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeEE
Q 015436          318 FLGKSI--DVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVV  395 (407)
Q Consensus       318 ~l~~~~--~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  395 (407)
                      |+++..  +.......|+|||.|+|.|+|++||++|++++||.|+++|+|++.++.  .+..+  ..+.++.++.+++|+
T Consensus       515 Wl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~--~~~~~--~~~~~~~p~~~l~v~  590 (633)
T PLN02738        515 WPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGA--PPVKM--TTGATIHTTEGLKMT  590 (633)
T ss_pred             CCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCC--CCccc--ccceEEeeCCCcEEE
Confidence            984321  112245689999999999999999999999999999999999987653  22222  234566677899999


Q ss_pred             EeecCCC
Q 015436          396 AQPRLAP  402 (407)
Q Consensus       396 ~~~R~~~  402 (407)
                      +++|...
T Consensus       591 l~~R~~~  597 (633)
T PLN02738        591 VTRRTKP  597 (633)
T ss_pred             EEECCCC
Confidence            9999754


No 19 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.6e-64  Score=475.18  Aligned_cols=371  Identities=28%  Similarity=0.449  Sum_probs=296.0

Q ss_pred             CcceEeCCCChhHHHHHhhhhccCCChHhhhhhHHHHHHHHHHHHHHHHhh-cCCceechHHHHHHHHHHHhHHhhcCcc
Q 015436           11 FSNITWSPYGPYFNQARKICTMELFTAKRLKSYEYIRVEELNVLLKHLYES-SGKPIALKDHLADVSLNVISRVVLGKKY   89 (407)
Q Consensus        11 ~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~-~~~~vd~~~~~~~~~~~~i~~~~fG~~~   89 (407)
                      |.|++++. |+.|+++||++ .++|+...++.+.+.+.+++..+...+... .++.+|+.+.+.++++|++|..+||...
T Consensus       118 G~gll~~~-g~~W~~~Rk~~-~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~~~~G~~~  195 (497)
T KOG0157|consen  118 GDGLLFSD-GEKWHKHRKLL-TPAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICKTAMGPES  195 (497)
T ss_pred             cCccccCC-chHHHHHHhhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHHHhcCCcc
Confidence            45888888 99999999999 699999999999999999999988888775 3444999999999999999999999322


Q ss_pred             cccccccchhhHHHHHHHHHHHHHhhccccccCccc-cccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC--
Q 015436           90 SNERQNGIEITRHELKEMIDELILLNGVFDIGDSIP-WLGFLDLQGNIKRMKAVAKKFDRFLEQVVDEHNARRKGIDN--  166 (407)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--  166 (407)
                      .....    ....++.+++..........   ...| +..++...+..++..++.+.+.+++++.|+++++.....+.  
T Consensus       196 ~~~~~----~~~~~~~~a~~~~~~~~~~~---~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~~  268 (497)
T KOG0157|consen  196 LDAEG----PELFEYVQAFDDLTELISKR---INLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEGSGE  268 (497)
T ss_pred             ccccC----CcccHHHHHHHHHHHHHHHH---HcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence            11111    12245555555444332211   1234 33333222357788899999999999999999876543221  


Q ss_pred             -CCCCcHHHHHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhccCCcc-c
Q 015436          167 -YVAKDMVDVLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIGKERW-F  244 (407)
Q Consensus       167 -~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~-~  244 (407)
                       ....|+++.+....     +..++++++.+++.++++||+|||+++++|++++|+.||++|+|+++|+.+++++... +
T Consensus       269 ~~~~~d~L~~~~~~~-----~~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~  343 (497)
T KOG0157|consen  269 EKKRLDFLDTLLLEE-----DKPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKW  343 (497)
T ss_pred             cchhhhHHHHHHHhc-----cCCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCC
Confidence             33567777522221     2478999999999999999999999999999999999999999999999999985322 2


Q ss_pred             ccccCCCChhHHHHHHHhhcCCC-CCCCCcceeecceeec-ceeeCCCCEEEecchhhccCCCCCC-CCCCCCCCccCCC
Q 015436          245 EEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVA-AYDILKGTQVLVNTWTIERDPALWE-NPNEFCPERFLGK  321 (407)
Q Consensus       245 ~~~~~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~-g~~ip~G~~v~~~~~~~~~d~~~~~-~p~~F~P~R~l~~  321 (407)
                      .....++|+||++||+||||||| +|... |.+.+|++++ |+.||||+.|.++++++|||+++|+ ||++|+||||+++
T Consensus       344 ~~~~~~~m~yl~~vi~EsLRLyppvp~~~-R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~  422 (497)
T KOG0157|consen  344 EVEKLDQMKYLEMVIKESLRLYPPVPLVA-RKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDG  422 (497)
T ss_pred             ChhhhhhhHHHHHHHHHHhccCCCCchhh-cccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCC
Confidence            33333469999999999999999 65554 9999999995 8999999999999999999999995 9999999999965


Q ss_pred             CCCCCCCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeEEEeecCC
Q 015436          322 SIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVVAQPRLA  401 (407)
Q Consensus       322 ~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~  401 (407)
                      ......++++|+|||+|+|.|+|++||++|+|+++++|+++|+|++..+.   .  ......+++.+..+++|++++|..
T Consensus       423 ~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~---~--~~~~~~~~l~~~~gl~v~~~~r~~  497 (497)
T KOG0157|consen  423 EEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGD---K--PKPVPELTLRPKNGLKVKLRPRGS  497 (497)
T ss_pred             CCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCC---C--ceeeeEEEEEecCCeEEEEEeCCC
Confidence            43334567899999999999999999999999999999999999987762   1  334567788999999999999963


No 20 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=1.6e-63  Score=470.43  Aligned_cols=368  Identities=22%  Similarity=0.283  Sum_probs=287.6

Q ss_pred             CcceEeCCCChhHHHHHhhhhccCCChHhhhhhH--HHHHHHHHHHHHHHHhh----cCCceechHHHHHHHHHHHhHHh
Q 015436           11 FSNITWSPYGPYFNQARKICTMELFTAKRLKSYE--YIRVEELNVLLKHLYES----SGKPIALKDHLADVSLNVISRVV   84 (407)
Q Consensus        11 ~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~--~~~~~~~~~l~~~l~~~----~~~~vd~~~~~~~~~~~~i~~~~   84 (407)
                      |+|++++ +|+.|+++||.+ ++.|+.++++.+.  +.+.+.++.+++.+.+.    .++++|+.+++..+++|+|+.++
T Consensus       120 g~gi~~~-~g~~wk~~Rk~l-~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~  197 (502)
T PLN02426        120 GRGIFNV-DGDSWRFQRKMA-SLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFS  197 (502)
T ss_pred             CCceeec-CcHHHHHHHHHh-HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHH
Confidence            4577665 599999999999 7999999888764  67778888888888654    24679999999999999999999


Q ss_pred             hcCcccccccccchhhHHHHHHHHHHHHHhhccccccCcccccc---ccCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015436           85 LGKKYSNERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWLG---FLDLQGNIKRMKAVAKKFDRFLEQVVDEHNARR  161 (407)
Q Consensus        85 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  161 (407)
                      ||.+++..+..   ....++...++.+...... .....+|++.   .+.+.+..++..+..+.+.+++.+.|+++++..
T Consensus       198 fG~~~~~l~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~  273 (502)
T PLN02426        198 FGLDPGCLELS---LPISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLG  273 (502)
T ss_pred             hCCCCcccCCC---CCccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            99988653311   0113455544443322111 1111223221   111122345667778888888888888876542


Q ss_pred             ccCCCCCCCcHHHHHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhccCC
Q 015436          162 KGIDNYVAKDMVDVLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIGKE  241 (407)
Q Consensus       162 ~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~  241 (407)
                          .....|+++.+++...        +++++.+++.++++||+|||+++++|++++|++||++|+||++|++++.+++
T Consensus       274 ----~~~~~dll~~ll~~~~--------~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~  341 (502)
T PLN02426        274 ----FSASKDLLSRFMASIN--------DDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPN  341 (502)
T ss_pred             ----cCCcchHHHHHHhcCC--------CHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCC
Confidence                1235789999996432        5788999999999999999999999999999999999999999999998753


Q ss_pred             -cccccccCCCChhHHHHHHHhhcCCC-CCCCCcceeecceee-cceeeCCCCEEEecchhhccCCCCC-CCCCCCCCCc
Q 015436          242 -RWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKV-AAYDILKGTQVLVNTWTIERDPALW-ENPNEFCPER  317 (407)
Q Consensus       242 -~~~~~~~~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R  317 (407)
                       ..++++++++||||+|||+|+||++| ++... |.+.+|.++ +|+.||+||.|.++++++||||++| +||++|+|||
T Consensus       342 ~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~-r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeR  420 (502)
T PLN02426        342 QEAASFEEMKEMHYLHAALYESMRLFPPVQFDS-KFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPER  420 (502)
T ss_pred             CCCCCHHHHhcChHHHHHHHHHHhCCCCCCCcc-eeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccc
Confidence             36799999999999999999999999 77665 999988887 8999999999999999999999999 9999999999


Q ss_pred             cCCCCCCCCCCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeEEEe
Q 015436          318 FLGKSIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVVAQ  397 (407)
Q Consensus       318 ~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  397 (407)
                      |++++.....+...++|||.|+|.|+|++||++|++++++.|+++|++++.++.  .+ ......++++.|+++++|+++
T Consensus       421 wl~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~--~~-~~~~~~~~~~~~~~gl~v~~~  497 (502)
T PLN02426        421 WLKNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRS--NR-APRFAPGLTATVRGGLPVRVR  497 (502)
T ss_pred             cCCCCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCC--CC-CCcccceeEEecCCCEEEEEE
Confidence            997421112245679999999999999999999999999999999999986432  11 122233567788899999999


Q ss_pred             ecC
Q 015436          398 PRL  400 (407)
Q Consensus       398 ~R~  400 (407)
                      +|.
T Consensus       498 ~r~  500 (502)
T PLN02426        498 ERV  500 (502)
T ss_pred             Ecc
Confidence            985


No 21 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=3.7e-63  Score=472.97  Aligned_cols=376  Identities=19%  Similarity=0.275  Sum_probs=283.4

Q ss_pred             CcceEeCCCChhHHHHHhhhhccCCChHhhhhhHHHH-HHHHHHHHHHHHhh--cCCceechHHHHHHHHHHHhHHhhcC
Q 015436           11 FSNITWSPYGPYFNQARKICTMELFTAKRLKSYEYIR-VEELNVLLKHLYES--SGKPIALKDHLADVSLNVISRVVLGK   87 (407)
Q Consensus        11 ~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~~~-~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~~i~~~~fG~   87 (407)
                      +.+++. .+|+.|+++||++ ++.|+.++++.+.+.+ .+.++.+++.+.+.  +++++|+.+++..+++|+++.++||.
T Consensus       112 g~~l~~-~~g~~w~~~Rr~l-~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~  189 (516)
T PLN03195        112 GDGIFN-VDGELWRKQRKTA-SFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVGFGV  189 (516)
T ss_pred             cCeeec-cCcHHHHHHHHhc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHHhCC
Confidence            345654 5699999999999 6999999999999976 66677888777643  46789999999999999999999999


Q ss_pred             cccccccccchhhHHHHHHHHHHHHHhhccccccCccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHccC---
Q 015436           88 KYSNERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWLGFLDLQGNIKRMKAVAKKFDRFLEQVVDEHNARRKGI---  164 (407)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---  164 (407)
                      +++......   ....+.+.++....... ......++.+.........+...+..+.+.+++.+.++++++.....   
T Consensus       190 ~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  265 (516)
T PLN03195        190 EIGTLSPSL---PENPFAQAFDTANIIVT-LRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEARKS  265 (516)
T ss_pred             CccccccCC---CccHHHHHHHHHHHHHH-HHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            886433100   01234333333222110 00011111111111111233445667778888888888876553211   


Q ss_pred             CCCCCCcHHHHHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhccC----
Q 015436          165 DNYVAKDMVDVLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIGK----  240 (407)
Q Consensus       165 ~~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~----  240 (407)
                      ......|+++.++....++  +..++++++..++.++++||+|||+++++|++++|++||++|+||++|+++++++    
T Consensus       266 ~~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~  343 (516)
T PLN03195        266 GKKVKHDILSRFIELGEDP--DSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKE  343 (516)
T ss_pred             cccccccHHHHHHhccCCC--CCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccccc
Confidence            1123568999999754332  3468999999999999999999999999999999999999999999999987643    


Q ss_pred             ----------------CcccccccCCCChhHHHHHHHhhcCCC-CCCCCcceeecceee-cceeeCCCCEEEecchhhcc
Q 015436          241 ----------------ERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKV-AAYDILKGTQVLVNTWTIER  302 (407)
Q Consensus       241 ----------------~~~~~~~~~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~-~g~~ip~G~~v~~~~~~~~~  302 (407)
                                      ++.++++++.+||||+|||+|+||++| ++... |.+.+|..+ +|+.|||||.|.++++++||
T Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~-r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~  422 (516)
T PLN03195        344 EDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDP-KGILEDDVLPDGTKVKAGGMVTYVPYSMGR  422 (516)
T ss_pred             ccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchh-hhhccCcCcCCCcEECCCCEEEEehHhhcc
Confidence                            245789999999999999999999999 77765 666666555 99999999999999999999


Q ss_pred             CCCCC-CCCCCCCCCccCCCCCCCCCCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCcccc
Q 015436          303 DPALW-ENPNEFCPERFLGKSIDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEV  381 (407)
Q Consensus       303 d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~  381 (407)
                      ||++| +||++|+||||++++......+..|+|||.|+|.|+|++||++|+++++|.|+++|++++.++.   +...  .
T Consensus       423 dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~--~  497 (516)
T PLN03195        423 MEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGH---PVKY--R  497 (516)
T ss_pred             ChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCC---ccee--e
Confidence            99999 9999999999996432112245679999999999999999999999999999999999986542   2222  2


Q ss_pred             ccccccccCCeeEEEeecC
Q 015436          382 FKLANQKKIPLEVVAQPRL  400 (407)
Q Consensus       382 ~~~~~~~~~~~~v~~~~R~  400 (407)
                      ...++.|+.+++|++++|.
T Consensus       498 ~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        498 MMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             eeeEEecCCCEEEEEEeCC
Confidence            3345567889999999984


No 22 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=2.6e-62  Score=464.25  Aligned_cols=351  Identities=19%  Similarity=0.291  Sum_probs=274.8

Q ss_pred             ceEeCCCChhHHHHHhhhhccCCChHhhhh-hHHHHHHHHHHHHHHHHhhcCCceechHHHHHHHHHHHhHHhhcCcccc
Q 015436           13 NITWSPYGPYFNQARKICTMELFTAKRLKS-YEYIRVEELNVLLKHLYESSGKPIALKDHLADVSLNVISRVVLGKKYSN   91 (407)
Q Consensus        13 ~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~   91 (407)
                      +++++ +|+.|+++|+++ .+.|+..+++. +.+.+.+.+..+++.|..  ++.+|+.+.+..++++++++++||.+.+.
T Consensus       124 ~~~~~-~g~~wr~~Rk~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~vd~~~~~~~~~~~vi~~~~fg~~~~~  199 (490)
T PLN02500        124 SMLVL-VGDMHRDMRSIS-LNFLSHARLRTHLLKEVERHTLLVLDSWKE--NSTFSAQDEAKKFTFNLMAKHIMSMDPGE  199 (490)
T ss_pred             ccccc-CCHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHhCC--CCCEEehHHHHHHHHHHHHHHHhCCCCCc
Confidence            56665 599999999999 58999988887 567888888888887754  56799999999999999999999987632


Q ss_pred             cccccchhhHHHHHHHHHHHHHhhccccccCccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CCCCC
Q 015436           92 ERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWLGFLDLQGNIKRMKAVAKKFDRFLEQVVDEHNARRKGID-NYVAK  170 (407)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~  170 (407)
                      ..       ..++...+..+......  ....+|+.       ..++..+..+.+.+++.+.++++++..+.++ .....
T Consensus       200 ~~-------~~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  263 (490)
T PLN02500        200 EE-------TEQLKKEYVTFMKGVVS--APLNFPGT-------AYRKALKSRATILKFIERKMEERIEKLKEEDESVEED  263 (490)
T ss_pred             hH-------HHHHHHHHHHHHhhhhc--chhcCCCc-------ccHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcc
Confidence            21       13333333333221110  00112221       1234556677888888888888776442211 12346


Q ss_pred             cHHHHHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhcc-----CCcccc
Q 015436          171 DMVDVLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIG-----KERWFE  245 (407)
Q Consensus       171 d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~-----~~~~~~  245 (407)
                      |+++.+++.       ..++++++++++.++++||+|||+++++|++++|++||++|+|+++|++++++     +...++
T Consensus       264 d~l~~ll~~-------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~  336 (490)
T PLN02500        264 DLLGWVLKH-------SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELN  336 (490)
T ss_pred             hHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCC
Confidence            899998863       24789999999999999999999999999999999999999999999999864     234578


Q ss_pred             cccCCCChhHHHHHHHhhcCCC-CCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCCCCCCCCCCCccCCCCCC
Q 015436          246 EKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSID  324 (407)
Q Consensus       246 ~~~~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~  324 (407)
                      ++++.+||||+|||+|+||+|| ++. ++|.+.+|++++||.|||||+|.++++++||||++|+||++|+||||++++..
T Consensus       337 ~~d~~~lpyl~avikEtlRl~P~~~~-~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~  415 (490)
T PLN02500        337 WEDYKKMEFTQCVINETLRLGNVVRF-LHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNR  415 (490)
T ss_pred             HHHhccCHHHHHHHHHHHhcCCCccC-eeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcc
Confidence            9999999999999999999999 666 46999999999999999999999999999999999999999999999964321


Q ss_pred             CC------CCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeEEEee
Q 015436          325 VK------GNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVVAQP  398 (407)
Q Consensus       325 ~~------~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  398 (407)
                      ..      .++..|+|||.|+|.|+|++||++|+++++|+|+++|+|++.++.  ..  ..  +..+ .++.++.|++++
T Consensus       416 ~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~--~~--~~--~~~~-~~~~~l~~~~~~  488 (490)
T PLN02500        416 GGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEAD--QA--FA--FPFV-DFPKGLPIRVRR  488 (490)
T ss_pred             cccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCC--cc--ee--cccc-cCCCCceEEEEe
Confidence            11      235689999999999999999999999999999999999987653  11  11  1122 334688998875


No 23 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=7.1e-63  Score=467.99  Aligned_cols=374  Identities=31%  Similarity=0.530  Sum_probs=302.3

Q ss_pred             CCcceEeCCCChhHHHHHhhhhccCCChH-hhhhhHHHHHHHHHHHHHHHHhhcC--CceechHHHHHHHHHHHhHHhhc
Q 015436           10 NFSNITWSPYGPYFNQARKICTMELFTAK-RLKSYEYIRVEELNVLLKHLYESSG--KPIALKDHLADVSLNVISRVVLG   86 (407)
Q Consensus        10 ~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~-~l~~~~~~~~~~~~~l~~~l~~~~~--~~vd~~~~~~~~~~~~i~~~~fG   86 (407)
                      .+.+++++. |+.|+.+|+.+ .+.|+.. .+ .+.+.+.+.++.+++.|.+..+  +.+|+.+++..+++|+++.++||
T Consensus        83 ~~~~l~~~~-~~~~~~~R~~~-~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~fG  159 (463)
T PF00067_consen   83 GGKGLFFSD-GERWRRQRRLL-APAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVLFG  159 (463)
T ss_dssp             TTTSSTTSS-HHHHHHHHHHH-HHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHHHS
T ss_pred             ccccccccc-ccccccccccc-cccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccccc
Confidence            456676666 79999999999 5788877 66 8999999999999999998733  36999999999999999999999


Q ss_pred             CcccccccccchhhHHHHHHHHHHHHHhhcc--ccccCccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 015436           87 KKYSNERQNGIEITRHELKEMIDELILLNGV--FDIGDSIPWLGFLDLQGNIKRMKAVAKKFDRFLEQVVDEHNARRKGI  164 (407)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  164 (407)
                      .+++...    +....++.+.+..+......  ..+...+||+.+++. ...+...++.+.+.+++.+.++++++..+..
T Consensus       160 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (463)
T PF00067_consen  160 KDFGSLD----DEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPT-PLFRRFKRARDRLRKYIKEIIEERREELDDG  234 (463)
T ss_dssp             SHHHGTT----HHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSH-HHHHHHHHHHHHHHHHHHHHHHHHHHSHHSS
T ss_pred             ceeeecc----ccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccc
Confidence            9876332    11234566666666544322  123445666655542 3456677778889999999999988877432


Q ss_pred             CCCCCCcHHHHHHHhc-CCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhccCCcc
Q 015436          165 DNYVAKDMVDVLLLLA-DDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIGKERW  243 (407)
Q Consensus       165 ~~~~~~d~~~~ll~~~-~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~  243 (407)
                       .....|+++.++... ..++ ...++.+++..++..+++||+|||+.+++|++++|++||++|+||++||+++.++++.
T Consensus       235 -~~~~~d~l~~ll~~~~~~~~-~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~  312 (463)
T PF00067_consen  235 -DESRRDLLDSLLQASSDSDG-PSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGRE  312 (463)
T ss_dssp             -SSSCSSHHHHHHHHHHTTTT-TSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSS
T ss_pred             -cccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence             246789999999987 3321 2479999999999999999999999999999999999999999999999999987778


Q ss_pred             cccccCCCChhHHHHHHHhhcCCC-CCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCCCCCCCCCCCccCCCC
Q 015436          244 FEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKS  322 (407)
Q Consensus       244 ~~~~~~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~  322 (407)
                      ++.+++.+||||+|||+||||++| ++..++|.+.+|++++|+.|||||.|.++++++|+||++|+||++|+|+||++.+
T Consensus       313 ~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~  392 (463)
T PF00067_consen  313 ITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDER  392 (463)
T ss_dssp             HHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999999999999999999 7768889999999999999999999999999999999999999999999999876


Q ss_pred             CCCCCCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeEEE
Q 015436          323 IDVKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVVA  396 (407)
Q Consensus       323 ~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  396 (407)
                      .........|+|||.|+|.|+|++||++|++++||.||++|+|+++++.  ...+.....+++ .|+.++.|.|
T Consensus       393 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~  463 (463)
T PF00067_consen  393 GISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGS--EPEPQEQQNGFL-LPPKPLKVKF  463 (463)
T ss_dssp             STBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTS--SGGEEECSCSSS-EEESSSEEEE
T ss_pred             cccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCC--CCCCccccCceE-eeCCCcEEeC
Confidence            4223467889999999999999999999999999999999999997653  122222222344 4455777764


No 24 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=7.2e-61  Score=453.15  Aligned_cols=372  Identities=23%  Similarity=0.349  Sum_probs=289.0

Q ss_pred             CcceEeCCCChhHHHHHhhhhccCCChHhhhhhHH-HHHHHHHHHHHHHHhh--cCCceechHHHHHHHHHHHhHHhhcC
Q 015436           11 FSNITWSPYGPYFNQARKICTMELFTAKRLKSYEY-IRVEELNVLLKHLYES--SGKPIALKDHLADVSLNVISRVVLGK   87 (407)
Q Consensus        11 ~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~-~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~~i~~~~fG~   87 (407)
                      +.+++++ +|+.|+++||++ ++.|+..+++.+.+ ++.++++.+++.|.+.  +++++|+.+.+..+++++++.++||.
T Consensus        96 ~~~i~~~-~g~~wk~~Rk~l-~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~fG~  173 (489)
T PLN02936         96 GSGFAIA-EGELWTARRRAV-VPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSVFNY  173 (489)
T ss_pred             cCccccC-CchHHHHHHHhh-cCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHcCC
Confidence            3556555 599999999999 69999888888754 7888999999999775  46789999999999999999999999


Q ss_pred             cccccccccchhhHHHHHHHHHHHHHhhccccccCccccccc--c-CccchHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 015436           88 KYSNERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWLGF--L-DLQGNIKRMKAVAKKFDRFLEQVVDEHNARRKGI  164 (407)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~--~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  164 (407)
                      +++....     . .++...+...+.... ......+|++..  + ......++..++.+.+.+++.+.++++++..++.
T Consensus       174 ~~~~~~~-----~-~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~  246 (489)
T PLN02936        174 NFDSLTT-----D-SPVIQAVYTALKEAE-TRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAE  246 (489)
T ss_pred             Ccccccc-----C-cHHHHHHHHHHHHHH-HhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            9865321     0 223333333222111 111223343211  0 0011234566777778888888887766543211


Q ss_pred             C---------CCCCCcHHHHHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHH
Q 015436          165 D---------NYVAKDMVDVLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELD  235 (407)
Q Consensus       165 ~---------~~~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~  235 (407)
                      .         .....++++.|+...      ..++.+++..++..+++||+|||+++++|++++|++||++|+|+++|++
T Consensus       247 ~~~~~~~~~~~~~~~d~l~~ll~~~------~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~  320 (489)
T PLN02936        247 GEVIEGEEYVNDSDPSVLRFLLASR------EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELD  320 (489)
T ss_pred             ccccccccccccCchHHHHHHHhcc------ccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence            0         012467888888643      2478999999999999999999999999999999999999999999999


Q ss_pred             HhccCCcccccccCCCChhHHHHHHHhhcCCC-CCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCCCCCCCCC
Q 015436          236 RVIGKERWFEEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALWENPNEFC  314 (407)
Q Consensus       236 ~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~  314 (407)
                      ++++. +.++++++.+||||+|||+||||++| ++...+|.+..|+.++|+.||+|+.|.++++++||||++|+||++|+
T Consensus       321 ~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~  399 (489)
T PLN02936        321 RVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFV  399 (489)
T ss_pred             HHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccC
Confidence            99875 45788999999999999999999999 88888777788888899999999999999999999999999999999


Q ss_pred             CCccCCCCCC--CCCCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCe
Q 015436          315 PERFLGKSID--VKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPL  392 (407)
Q Consensus       315 P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (407)
                      ||||++++..  .......++|||.|+|.|+|++||++|++++++.|+++|+|+++++   .++..  ..++++.|+.++
T Consensus       400 PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~---~~~~~--~~~~~~~~~~~~  474 (489)
T PLN02936        400 PERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPD---QDIVM--TTGATIHTTNGL  474 (489)
T ss_pred             ccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCC---Cccce--ecceEEeeCCCe
Confidence            9999954321  1123458999999999999999999999999999999999998765   22222  234555677899


Q ss_pred             eEEEeecCCCC
Q 015436          393 EVVAQPRLAPH  403 (407)
Q Consensus       393 ~v~~~~R~~~~  403 (407)
                      .|++++|..+.
T Consensus       475 ~v~~~~R~~~~  485 (489)
T PLN02936        475 YMTVSRRRVPD  485 (489)
T ss_pred             EEEEEeeeCCC
Confidence            99999998654


No 25 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=2.8e-60  Score=446.85  Aligned_cols=346  Identities=23%  Similarity=0.301  Sum_probs=273.3

Q ss_pred             ceEeCCCChhHHHHHhhhhccCCChHhhhh-hHHHHHHHHHHHHHHHHhhcCCceechHHHHHHHHHHHhHHhhcCcccc
Q 015436           13 NITWSPYGPYFNQARKICTMELFTAKRLKS-YEYIRVEELNVLLKHLYESSGKPIALKDHLADVSLNVISRVVLGKKYSN   91 (407)
Q Consensus        13 ~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~   91 (407)
                      +++. .+|+.|+++|+++ .++|++..++. +.+.+.+.+++++++|..  ++++|+.+.+..+++++++.++||.+...
T Consensus       112 ~~~~-~~g~~w~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~g~~~~~  187 (463)
T PLN02774        112 NIAA-VHGSTHRYMRGSL-LSLISPTMIRDHLLPKIDEFMRSHLSGWDG--LKTIDIQEKTKEMALLSALKQIAGTLSKP  187 (463)
T ss_pred             chhh-cCCHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHhhCC--CCCEEeeHHHHHHHHHHHHHHHcCCCChH
Confidence            4554 4699999999999 68999998876 789999989998888764  56899999999999999999999976421


Q ss_pred             cccccchhhHHHHHHHHHHHHHhhccccccCccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCc
Q 015436           92 ERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWLGFLDLQGNIKRMKAVAKKFDRFLEQVVDEHNARRKGIDNYVAKD  171 (407)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d  171 (407)
                      .        ..++...+..+..  ...    .+|.  +++.. ..++..++.+.+.+++.+.++++++..     ...+|
T Consensus       188 ~--------~~~~~~~~~~~~~--~~~----~~~~--~lp~~-~~~~~~~~~~~~~~~~~~~i~~r~~~~-----~~~~d  245 (463)
T PLN02774        188 I--------SEEFKTEFFKLVL--GTL----SLPI--DLPGT-NYRSGVQARKNIVRMLRQLIQERRASG-----ETHTD  245 (463)
T ss_pred             H--------HHHHHHHHHHHhc--ccc----cCCc--CCCCh-hhhHHHHHHHHHHHHHHHHHHHHHhcC-----CCccc
Confidence            1        1222222222211  111    1121  11111 134556677888888888888765432     23579


Q ss_pred             HHHHHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhccC---Cccccccc
Q 015436          172 MVDVLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIGK---ERWFEEKD  248 (407)
Q Consensus       172 ~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~---~~~~~~~~  248 (407)
                      +++.++....+   +..++++++..++.++++||+|||+++++|++++|++||++|+|+++|++++++.   ...+++++
T Consensus       246 ~l~~ll~~~~~---~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~  322 (463)
T PLN02774        246 MLGYLMRKEGN---RYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWND  322 (463)
T ss_pred             HHHHHHhCccC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHH
Confidence            99999873321   2358999999999999999999999999999999999999999999999999863   35678999


Q ss_pred             CCCChhHHHHHHHhhcCCC-CCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCCCCCCCCCCCccCCCCCCCCC
Q 015436          249 IVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDVKG  327 (407)
Q Consensus       249 ~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~  327 (407)
                      ++++|||+|||+|+||++| ++ .++|.+.+|++++|+.||||+.|.++++++||||++|+||++|+||||++.+..   
T Consensus       323 l~~lpyl~a~ikE~lRl~P~v~-~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~---  398 (463)
T PLN02774        323 YKSMRFTRAVIFETSRLATIVN-GVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLE---  398 (463)
T ss_pred             HhcCcHHHHHHHHHHhcCCCCC-CcccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcC---
Confidence            9999999999999999999 55 556999999999999999999999999999999999999999999999964321   


Q ss_pred             CCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeEEEee
Q 015436          328 NDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVVAQP  398 (407)
Q Consensus       328 ~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  398 (407)
                      ....++|||+|+|.|+|++||++|+++++|.|+++|+|++.++.   +.  ....  ++.|++++.|++++
T Consensus       399 ~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~---~~--~~~~--~~~p~~g~~~~~~~  462 (463)
T PLN02774        399 SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGD---KL--MKFP--RVEAPNGLHIRVSP  462 (463)
T ss_pred             CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCC---cc--ccCC--CCCCCCCceEEeee
Confidence            22369999999999999999999999999999999999997652   11  1111  23367899999874


No 26 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=2e-59  Score=446.21  Aligned_cols=354  Identities=23%  Similarity=0.307  Sum_probs=280.5

Q ss_pred             EeCCCChhHHHHHhhhhccCC-ChHhhhhhHHHHHHHHHHHHHHHHhhcCCceechHHHHHHHHHHHhHHhhcCcccccc
Q 015436           15 TWSPYGPYFNQARKICTMELF-TAKRLKSYEYIRVEELNVLLKHLYESSGKPIALKDHLADVSLNVISRVVLGKKYSNER   93 (407)
Q Consensus        15 ~~~~~g~~w~~~Rr~~~~~~f-s~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~   93 (407)
                      ++..+|+.|+++||.+ .+.| ++++++.+.+.+.++++.+++.+..  ++.+|+.+.+..++++++++++||.+++...
T Consensus       130 ~~~~~g~~w~~~R~~~-~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~--~~~v~~~~~~~~~~~~vi~~~~~G~~~~~~~  206 (490)
T PLN02302        130 FVGITGEEHKRLRRLT-AAPVNGPEALSTYIPYIEENVKSCLEKWSK--MGEIEFLTELRKLTFKIIMYIFLSSESELVM  206 (490)
T ss_pred             ccccCcHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHHhcC--CCCEehHHHHHHHHHHHHHHHHcCCCChHHH
Confidence            3445699999999999 5777 5778999999999999999999865  4579999999999999999999998764221


Q ss_pred             cccchhhHHHHHHHHHHHHHhhccccccCccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcHH
Q 015436           94 QNGIEITRHELKEMIDELILLNGVFDIGDSIPWLGFLDLQGNIKRMKAVAKKFDRFLEQVVDEHNARRKGIDNYVAKDMV  173 (407)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~  173 (407)
                              +.+...+..+......  ....+|..       ..++..+..+.+.+++.+.++++++..+........|++
T Consensus       207 --------~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l  269 (490)
T PLN02302        207 --------EALEREYTTLNYGVRA--MAINLPGF-------AYHRALKARKKLVALFQSIVDERRNSRKQNISPRKKDML  269 (490)
T ss_pred             --------HHHHHHHHHHHHHhhh--CCcCCCch-------hhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcCCHH
Confidence                    2232222222111111  11112211       123344566778888888888876554322223457999


Q ss_pred             HHHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhccCC----cccccccC
Q 015436          174 DVLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIGKE----RWFEEKDI  249 (407)
Q Consensus       174 ~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~----~~~~~~~~  249 (407)
                      +.+++...++  +..++++++..++..+++||+|||+++++|++++|++||++|+||++|++++++..    ..++++++
T Consensus       270 ~~ll~~~~~~--~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l  347 (490)
T PLN02302        270 DLLLDAEDEN--GRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDV  347 (490)
T ss_pred             HHHHhhhccC--CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence            9999865433  34589999999999999999999999999999999999999999999999987642    23788999


Q ss_pred             CCChhHHHHHHHhhcCCC-CCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCCCCCCCCCCCccCCCCCCCCCC
Q 015436          250 VNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDVKGN  328 (407)
Q Consensus       250 ~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~  328 (407)
                      ++||||+|||+|+||++| ++.. +|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||++..    ..
T Consensus       348 ~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~----~~  422 (490)
T PLN02302        348 RKMEYLSQVIDETLRLINISLTV-FREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT----PK  422 (490)
T ss_pred             hcChHHHHHHHHHHHhCCCcccc-hhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCC----CC
Confidence            999999999999999999 6665 59999999999999999999999999999999999999999999999643    24


Q ss_pred             CCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeEEEeecCC
Q 015436          329 DFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVVAQPRLA  401 (407)
Q Consensus       329 ~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~  401 (407)
                      +..++|||.|+|.|+|++||.+|++++++.|+++|+|++.++.    .++.  ....+.|..++.+++++|.+
T Consensus       423 ~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~----~~~~--~~~~~~p~~~~~~~~~~~~~  489 (490)
T PLN02302        423 AGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG----CKVM--YLPHPRPKDNCLARITKVAS  489 (490)
T ss_pred             CCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC----Ccce--eCCCCCCCCCceEEEEeccC
Confidence            5689999999999999999999999999999999999986542    1222  22235677899999999875


No 27 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=1.5e-59  Score=440.92  Aligned_cols=351  Identities=21%  Similarity=0.291  Sum_probs=275.2

Q ss_pred             ceEeCCCChhHHHHHhhhhccCCChHhhhh-hHHHHHHHHHHHHHHHHhhcCCceechHHHHHHHHHHHhHHhhcCcccc
Q 015436           13 NITWSPYGPYFNQARKICTMELFTAKRLKS-YEYIRVEELNVLLKHLYESSGKPIALKDHLADVSLNVISRVVLGKKYSN   91 (407)
Q Consensus        13 ~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~   91 (407)
                      ++++. +|+.|+++|+++ .+.|++.++.. +.+.+.+.++.+++.+..  ++.+|+.+.+..++++++++++||.+.+.
T Consensus        93 ~~~~~-~g~~wr~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~vi~~~~~G~~~~~  168 (452)
T PLN03141         93 SILLI-NGSLQRRVHGLI-GAFLKSPHLKAQITRDMERYVSESLDSWRD--DPPVLVQDETKKIAFEVLVKALISLEPGE  168 (452)
T ss_pred             ccccc-CcHHHHHHHHHH-HHhcCcHHHHHHHHHHHHHHHHHHHHhccC--CCCEEhHHHHHHHHHHHHHHHHcCCCchH
Confidence            45555 599999999999 57888777765 356666777777766643  67899999999999999999999976532


Q ss_pred             cccccchhhHHHHHHHHHHHHHhhccccccCccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC---CC
Q 015436           92 ERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWLGFLDLQGNIKRMKAVAKKFDRFLEQVVDEHNARRKGIDN---YV  168 (407)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~  168 (407)
                      .        ..++...+..+.....      .+|+.  ++.. ...+..++.+.+.+++.+.|++++........   ..
T Consensus       169 ~--------~~~~~~~~~~~~~~~~------~~~~~--~p~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~  231 (452)
T PLN03141        169 E--------MEFLKKEFQEFIKGLM------SLPIK--LPGT-RLYRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETGI  231 (452)
T ss_pred             H--------HHHHHHHHHHHhhhHH------hCccC--CCch-HhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccCC
Confidence            1        1333333333322111      12211  1111 12344567788888999999888765422111   12


Q ss_pred             CCcHHHHHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhcc----CCccc
Q 015436          169 AKDMVDVLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIG----KERWF  244 (407)
Q Consensus       169 ~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~----~~~~~  244 (407)
                      ..|+++.++...     +..++++++..++..+++||+|||+.+++|++++|+.||++|+++++|++++.+    .+..+
T Consensus       232 ~~d~l~~ll~~~-----~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~  306 (452)
T PLN03141        232 PKDVVDVLLRDG-----SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPL  306 (452)
T ss_pred             hhhHHHHHHhcC-----CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCC
Confidence            468999988753     235899999999999999999999999999999999999999999999988753    24457


Q ss_pred             ccccCCCChhHHHHHHHhhcCCCCCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCCCCCCCCCCCccCCCCCC
Q 015436          245 EEKDIVNLPFIEAIIKETMRLHGAPMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSID  324 (407)
Q Consensus       245 ~~~~~~~lp~L~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~  324 (407)
                      +.+++.+||||+|||+|++|++|+...++|.+.+|++++||.||||+.|.++++++||||++|+||++|+||||++.+. 
T Consensus       307 ~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~-  385 (452)
T PLN03141        307 YWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDM-  385 (452)
T ss_pred             CHHHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCC-
Confidence            8899999999999999999999933366799999999999999999999999999999999999999999999996532 


Q ss_pred             CCCCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeEEEeecCC
Q 015436          325 VKGNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVVAQPRLA  401 (407)
Q Consensus       325 ~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~  401 (407)
                         .+..|+|||.|+|.|+|++||++|+++++|.|+++|+|+.+++.   .  .   ...++.|..++.|++++|+.
T Consensus       386 ---~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~---~--~---~~~~~~~~~~~~~~~~~~~~  451 (452)
T PLN03141        386 ---NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT---I--V---NFPTVRMKRKLPIWVTRIDD  451 (452)
T ss_pred             ---CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC---e--e---ecccccCCCCceEEEEeCCC
Confidence               35689999999999999999999999999999999999986542   1  1   12366778899999999974


No 28 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=1e-58  Score=435.93  Aligned_cols=343  Identities=20%  Similarity=0.309  Sum_probs=275.6

Q ss_pred             cceEeCCCChhHHHHHhhhhccCCChHhhhhhHHHHHHHHHHHHHHHHhhcCCceechHHHHHHHHHHHhHHhhcCcccc
Q 015436           12 SNITWSPYGPYFNQARKICTMELFTAKRLKSYEYIRVEELNVLLKHLYESSGKPIALKDHLADVSLNVISRVVLGKKYSN   91 (407)
Q Consensus        12 ~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~   91 (407)
                      .++++. +|+.|+++||++ .+.|++.+++.+.+.+.++++++++.|.   ++.+|+.+.+..+++++++.++||.+...
T Consensus       116 ~~l~~~-~g~~w~~~Rk~l-~~~f~~~~l~~~~~~i~~~~~~~~~~~~---~~~v~~~~~~~~~~~~v~~~~~fG~~~~~  190 (463)
T PLN02196        116 QAIFFH-QGDYHAKLRKLV-LRAFMPDAIRNMVPDIESIAQESLNSWE---GTQINTYQEMKTYTFNVALLSIFGKDEVL  190 (463)
T ss_pred             cccccc-CcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHcCC---CCeEEeHHHHHHHHHHHHHHHHcCCCCch
Confidence            355554 599999999999 5899999999999999999999998874   46899999999999999999999987522


Q ss_pred             cccccchhhHHHHHHHHHHHHHhhccccccCccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCc
Q 015436           92 ERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWLGFLDLQGNIKRMKAVAKKFDRFLEQVVDEHNARRKGIDNYVAKD  171 (407)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d  171 (407)
                      ..        ..+.........      ....+|+.  ++ ....++..++.+.+.+++.+.++++++..     ....|
T Consensus       191 ~~--------~~~~~~~~~~~~------~~~~~~~~--~p-~~~~~~~~~a~~~~~~~~~~~i~~~~~~~-----~~~~d  248 (463)
T PLN02196        191 YR--------EDLKRCYYILEK------GYNSMPIN--LP-GTLFHKSMKARKELAQILAKILSKRRQNG-----SSHND  248 (463)
T ss_pred             HH--------HHHHHHHHHHhc------chhccccc--CC-CccchHHHHHHHHHHHHHHHHHHHHhhcC-----CCccc
Confidence            11        222222221111      11123321  11 11234556677788888888887765432     23568


Q ss_pred             HHHHHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhccC---Cccccccc
Q 015436          172 MVDVLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIGK---ERWFEEKD  248 (407)
Q Consensus       172 ~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~---~~~~~~~~  248 (407)
                      +++.++..      ...++++++..++..+++||+|||+++++|++++|++||++|+|+++|++++.+.   ...+++++
T Consensus       249 ~l~~ll~~------~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~  322 (463)
T PLN02196        249 LLGSFMGD------KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWED  322 (463)
T ss_pred             HHHHHHhc------CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHH
Confidence            99988852      2368999999999999999999999999999999999999999999999998763   35678999


Q ss_pred             CCCChhHHHHHHHhhcCCC-CCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCCCCCCCCCCCccCCCCCCCCC
Q 015436          249 IVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDVKG  327 (407)
Q Consensus       249 ~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~  327 (407)
                      ++++|||+|||+|+||++| ++... |.+.+|++++||.|||||.|.++++++||||++|+||++|+||||++..     
T Consensus       323 ~~~l~yl~avi~EtlRl~p~~~~~~-R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~-----  396 (463)
T PLN02196        323 TKKMPLTSRVIQETLRVASILSFTF-REAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP-----  396 (463)
T ss_pred             HhcChHHHHHHHHHHhcCCCccccc-eeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC-----
Confidence            9999999999999999999 66665 9999999999999999999999999999999999999999999999632     


Q ss_pred             CCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeEEEeec
Q 015436          328 NDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVVAQPR  399 (407)
Q Consensus       328 ~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R  399 (407)
                      .+..++|||.|+|.|+|+++|++|+++++|.|+++|+|+++++.    .++.  ...+..|+.++.|+++..
T Consensus       397 ~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~----~~~~--~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        397 KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS----NGIQ--YGPFALPQNGLPIALSRK  462 (463)
T ss_pred             CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC----CceE--EcccccCCCCceEEEecC
Confidence            34689999999999999999999999999999999999987542    2232  233445788988888653


No 29 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=2.4e-57  Score=425.22  Aligned_cols=351  Identities=18%  Similarity=0.258  Sum_probs=270.5

Q ss_pred             cceEeCCCChhHHHHHhhhhccCCChHhhhhhHH-HHHHHHHHHHHHHHhhcCCceechHHHHHHHHHHHhHHhhcCccc
Q 015436           12 SNITWSPYGPYFNQARKICTMELFTAKRLKSYEY-IRVEELNVLLKHLYESSGKPIALKDHLADVSLNVISRVVLGKKYS   90 (407)
Q Consensus        12 ~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~-~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~   90 (407)
                      ++++++ +|+.|+++|+++ .+.++.+.+..+.. .+.+.++..++.|    ++++++.+.+.+++++++++++||.+.+
T Consensus       115 ~~l~~~-~g~~wr~~R~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~t~~vi~~~~fg~~~~  188 (472)
T PLN02987        115 HSLLLM-KGNLHKKMHSLT-MSFANSSIIKDHLLLDIDRLIRFNLDSW----SSRVLLMEEAKKITFELTVKQLMSFDPG  188 (472)
T ss_pred             cccccc-CcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHhh----ccceehHHHHHHHHHHHHHHHHcCCCCh
Confidence            567777 599999999998 45545555544332 1222333333333    2479999999999999999999997653


Q ss_pred             ccccccchhhHHHHHHHHHHHHHhhccccccCccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCC
Q 015436           91 NERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWLGFLDLQGNIKRMKAVAKKFDRFLEQVVDEHNARRKGIDNYVAK  170 (407)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  170 (407)
                      ...        +.+...+.......    ....+|++.     ...++..+..+.+.+++.+.++++++.... +....+
T Consensus       189 ~~~--------~~~~~~~~~~~~~~----~~~~~p~l~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~-~~~~~~  250 (472)
T PLN02987        189 EWT--------ESLRKEYVLVIEGF----FSVPLPLFS-----TTYRRAIQARTKVAEALTLVVMKRRKEEEE-GAEKKK  250 (472)
T ss_pred             HHH--------HHHHHHHHHHHhhh----hcCCCcCCC-----chHHHHHHHHHHHHHHHHHHHHHHHhhhhc-cCcccc
Confidence            211        22222222222111    122345431     224667778888999999999988765422 112357


Q ss_pred             cHHHHHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhcc---CCcccccc
Q 015436          171 DMVDVLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIG---KERWFEEK  247 (407)
Q Consensus       171 d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~---~~~~~~~~  247 (407)
                      |+++.++...      ..++++++..++..+++||+|||+.+++|++++|+.||++|+++++|++++.+   +...++++
T Consensus       251 d~l~~ll~~~------~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~  324 (472)
T PLN02987        251 DMLAALLASD------DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWS  324 (472)
T ss_pred             cHHHHHHhcC------CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHH
Confidence            8999999642      25899999999999999999999999999999999999999999999999875   23457889


Q ss_pred             cCCCChhHHHHHHHhhcCCCCCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCCCCCCCCCCCccCCCCCCCCC
Q 015436          248 DIVNLPFIEAIIKETMRLHGAPMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDVKG  327 (407)
Q Consensus       248 ~~~~lp~L~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~  327 (407)
                      ++.+||||+|||+|+||++|+...++|.+.+|++++||.||||+.|.++++++||||++|+||++|+||||++.+.. ..
T Consensus       325 ~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~-~~  403 (472)
T PLN02987        325 DYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT-TV  403 (472)
T ss_pred             HHhcChHHHHHHHHHHHccCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCC-CC
Confidence            99999999999999999999334566999999999999999999999999999999999999999999999964322 12


Q ss_pred             CCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeEEEeecC
Q 015436          328 NDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVVAQPRL  400 (407)
Q Consensus       328 ~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~  400 (407)
                      ....++|||.|+|.|+|++||++|++++++.|+++|+|+++++.   +  ..  +..++.|..++.+++++|+
T Consensus       404 ~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~--~~--~~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        404 PSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQD---K--LV--FFPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             CCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCC---c--ee--ecccccCCCCceEEEEecc
Confidence            34679999999999999999999999999999999999987652   2  22  2336678889999999996


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4.4e-54  Score=372.88  Aligned_cols=363  Identities=24%  Similarity=0.360  Sum_probs=289.5

Q ss_pred             CcceEeCCCChhHHHHHhhhhccCCChHhhhhhHHHHHHHHHHHHHH-HHhhcCCceechHHHHHHHHHHHhHHhhcCcc
Q 015436           11 FSNITWSPYGPYFNQARKICTMELFTAKRLKSYEYIRVEELNVLLKH-LYESSGKPIALKDHLADVSLNVISRVVLGKKY   89 (407)
Q Consensus        11 ~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~-l~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~   89 (407)
                      |.|++..-.+....++.+.+ +..+...+++++.+.+.+++++.+.. +.+ ++....+......+.+.+.-..+||+..
T Consensus       112 g~~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e~m~~el~~~f~~~~~~-s~~~d~l~~~~~~ii~tAs~~ll~~e~r  189 (486)
T KOG0684|consen  112 GKGVVYDVPNHVMMEQKKFF-KSALGGVALKSLVELMLEELHAYFETSLGE-SGETDGLYTFCRLIIFTASRLLLGGEVR  189 (486)
T ss_pred             CCCccccCCCchHHHHHHHH-HHHhchhhHHHHHHHHHHHHHHHHhccccc-ccchhHhhhhhHHHhhhhHHHhhhhhhh
Confidence            35677777788888888888 68888999999999999999998887 544 4556666777777777777777777655


Q ss_pred             cccccccchhhHHHHHHHHHHHHHhhccccccCccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCC
Q 015436           90 SNERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWLGFLDLQGNIKRMKAVAKKFDRFLEQVVDEHNARRKGIDNYVA  169 (407)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  169 (407)
                      ...+        .+....+.++......  +...||.  +++.+ ..++..++.+.+.+.+...+.++++..    +...
T Consensus       190 ~~~d--------~~~a~l~~dLd~~F~~--~d~~FP~--~LP~~-~~r~~~ra~~~i~k~f~~~i~~rr~s~----s~~~  252 (486)
T KOG0684|consen  190 DQLD--------ADVAKLYHDLDQGFQP--FDFLFPY--NLPIP-LLRRRDRARKKISKIFSKIILDRRASI----SKWD  252 (486)
T ss_pred             hhhc--------chHHHHHHHHhccccc--hHhhccc--CCCcc-hhhhHHHHHHHHHHHHHHHHHHHHhcc----cccc
Confidence            3322        3333444444432222  2224552  22222 244556888999999999998888765    2445


Q ss_pred             CcHHHHHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhccCCcc-ccccc
Q 015436          170 KDMVDVLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIGKERW-FEEKD  248 (407)
Q Consensus       170 ~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~-~~~~~  248 (407)
                      .|+++.+++...+   +...+++++....+.+++||..||+.|..|++++|++|||+++.+++|+++++|+... ++++.
T Consensus       253 ~dmlq~l~~~y~d---g~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~  329 (486)
T KOG0684|consen  253 NDMLQSLMEKYKD---GRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQ  329 (486)
T ss_pred             HHHHHHHHHHhhc---CCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHH
Confidence            7899999983332   4578999999999999999999999999999999999999999999999999987544 89999


Q ss_pred             CCCChhHHHHHHHhhcCCC-CCCCCcceeecceeecc----eeeCCCCEEEecchhhccCCCCCCCCCCCCCCccCCCCC
Q 015436          249 IVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVAA----YDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSI  323 (407)
Q Consensus       249 ~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~g----~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~  323 (407)
                      +++||.|++||+|||||+| +++.+ |.+.+|.++.+    |.||+|..|.++.+.+||||++||||+.|+|+||+++++
T Consensus       330 L~~lplL~~~IkEtLRL~~p~~~~~-R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~  408 (486)
T KOG0684|consen  330 LKDLPLLDSCIKETLRLHPPAHSLM-RKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNG  408 (486)
T ss_pred             HhcchHHHHHHHHHHhcCCchhhHH-HhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCc
Confidence            9999999999999999999 56555 99999999976    999999999999999999999999999999999997554


Q ss_pred             CCC----CCCCceeccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCCCCCcccCccccccccccccCCeeEEEeec
Q 015436          324 DVK----GNDFELLPFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGNMSNKELNMEEVFKLANQKKIPLEVVAQPR  399 (407)
Q Consensus       324 ~~~----~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R  399 (407)
                      +.+    .-++.+||||+|.|.|||+.||.+|+|.++..+|++||+++.++   ..++.+. ..++..|.++++++.+.|
T Consensus       409 ~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~---~~P~~d~-s~~v~~P~g~v~irYK~R  484 (486)
T KOG0684|consen  409 ESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG---PFPEVDY-SRMVMQPEGDVRIRYKRR  484 (486)
T ss_pred             ccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC---CCCCCCH-HHhhcCCCCCceEEEeec
Confidence            321    12456799999999999999999999999999999999999986   2223332 344778899999999988


Q ss_pred             C
Q 015436          400 L  400 (407)
Q Consensus       400 ~  400 (407)
                      +
T Consensus       485 ~  485 (486)
T KOG0684|consen  485 P  485 (486)
T ss_pred             C
Confidence            6


No 31 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=5.2e-53  Score=388.69  Aligned_cols=296  Identities=31%  Similarity=0.493  Sum_probs=253.3

Q ss_pred             EeCCCChhHHHHHhhhhccCCChHhhhhhHHHHHHHHHHHHHHHHhhcCCceechHHHHHHHHHHHhHHhhcCccccccc
Q 015436           15 TWSPYGPYFNQARKICTMELFTAKRLKSYEYIRVEELNVLLKHLYESSGKPIALKDHLADVSLNVISRVVLGKKYSNERQ   94 (407)
Q Consensus        15 ~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~   94 (407)
                      ++..+|+.|.++||++ ++.|+++.++++.+.+.+.++++++.+ ..+ +.+++.+....+++++|+ .+||.+.+..  
T Consensus        91 ll~~dg~~H~r~Rkl~-~~~F~~~~~~~~~~~i~~~~~~~~~~~-~~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~--  164 (411)
T COG2124          91 LLTLDGPEHTRLRKLL-APAFTPRALRGYRPLIREIADRLLDDL-WQG-GADLVLDFAAELTLRVIA-ELLGVPLEDR--  164 (411)
T ss_pred             eeecCCHHHHHHHHHh-ccccCHHHHHHHHHHHHHHHHHHHHhc-ccC-CchhHHHHhhhhhHHHHH-HHhCCCHHHH--
Confidence            4455699999999999 699999999999999999999999999 433 788899999999999999 9999887432  


Q ss_pred             ccchhhHHHHHHHHHHHHHhhccccccCccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcHHH
Q 015436           95 NGIEITRHELKEMIDELILLNGVFDIGDSIPWLGFLDLQGNIKRMKAVAKKFDRFLEQVVDEHNARRKGIDNYVAKDMVD  174 (407)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~  174 (407)
                             ..+..........   .     .|..   .......+..++...+.+++..+|++++.       ...+|+++
T Consensus       165 -------~~~~~~~~~~~~~---~-----~~~~---~~~~~~~~~~~a~~~~~~~~~~li~~rR~-------~~~~dlls  219 (411)
T COG2124         165 -------PQLLRWSDALLLR---L-----DPDL---GPEEPWRRARAARRELDAYLRALIAERRA-------APRDDLLS  219 (411)
T ss_pred             -------HHHHHHHHHHHhc---c-----Cccc---CCcccHHHHHHHHHHHHHHHHHHHHHhcc-------CCcccHHH
Confidence                   2222222222211   0     0111   11223566788899999999999999872       44689999


Q ss_pred             HHHHhcCCCCcccccchhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhccCCcccccccCCCChh
Q 015436          175 VLLLLADDPTLEVRLDRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVIGKERWFEEKDIVNLPF  254 (407)
Q Consensus       175 ~ll~~~~~~~~~~~~~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~  254 (407)
                      .|+....++  +..+++++|.+++.++++||+|||+++|+|+++.|++||+.++++++|.+.                ||
T Consensus       220 ~l~~a~~~~--~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~  281 (411)
T COG2124         220 LLLSAEDDG--GGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PL  281 (411)
T ss_pred             HHHHHhhCC--CCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HH
Confidence            999887754  226999999999999999999999999999999999999999999999875                79


Q ss_pred             HHHHHHHhhcCCC-CCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCCCCCCCCCCCccCCCCCCCCCCCCcee
Q 015436          255 IEAIIKETMRLHG-APMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDVKGNDFELL  333 (407)
Q Consensus       255 L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~  333 (407)
                      ++++|+|+||+|| ++. ++|.+.+|++++|+.||||+.|.++++++||||+.|++|++|+|+||.          ..++
T Consensus       282 ~~~~v~E~LR~~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l  350 (411)
T COG2124         282 LEAVVEETLRLYPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHL  350 (411)
T ss_pred             HHHHHHHHHHhCCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCc
Confidence            9999999999999 666 889999999999999999999999999999999999999999999986          5799


Q ss_pred             ccCCCCCCCCChhHHHHHHHHHHHHhhhcceeEcCCC
Q 015436          334 PFGAGRRMCPGYSNGLKVIQSSLANLLHGFTWKLPGN  370 (407)
Q Consensus       334 ~Fg~G~r~C~G~~lA~~e~~~~la~ll~~~~~~~~~~  370 (407)
                      |||+|+|.|+|..||++|++++|+.|+++|++....+
T Consensus       351 ~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~  387 (411)
T COG2124         351 PFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAE  387 (411)
T ss_pred             CCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC
Confidence            9999999999999999999999999999999887654


No 32 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=6.7e-50  Score=372.35  Aligned_cols=323  Identities=18%  Similarity=0.266  Sum_probs=230.5

Q ss_pred             eEeCCCChhHHHHHhhhhccCCChHhhhhhHHHHHHHHHHHHHHHHhh--cCCceechHHHHHHHHHHHhHHhhcCcccc
Q 015436           14 ITWSPYGPYFNQARKICTMELFTAKRLKSYEYIRVEELNVLLKHLYES--SGKPIALKDHLADVSLNVISRVVLGKKYSN   91 (407)
Q Consensus        14 ~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~   91 (407)
                      .++..+|+.|+++||++ .+.|+ ..++.+.+.+.+.++.+++.|...  .++++|+.+.+..++++++++.+||.+.+.
T Consensus       117 s~~~~~g~~H~r~Rrll-~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~vdv~~~~~~lt~~vi~~~lfG~~~~~  194 (480)
T PLN02648        117 SYLDPSEPKHAKLKSFL-FELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKGKAEFNDPLDQMAFNFLCKALTGKDPSE  194 (480)
T ss_pred             eecCCCCchHHHHHHHH-HHHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCCCccccchHHHHHHHHHHHHHcCCCcch
Confidence            44456699999999999 69998 467889999999999999999653  456799999999999999999999986643


Q ss_pred             cccccchhhHHHHHHHHHHHHHhhccccccCccc-cccccCccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 015436           92 ERQNGIEITRHELKEMIDELILLNGVFDIGDSIP-WLGFLDLQG---NIKRMKAVAKKFDRFLEQVVDEHNARRKGIDNY  167 (407)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  167 (407)
                      ..      ..+.+......+............+| ++..+....   ......+..+.+.+++..               
T Consensus       195 ~~------l~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---------------  253 (480)
T PLN02648        195 TA------LGSDGPALIQKWLALQLAPLASTGLPHVLEELLLHTFPLPFFLVKSDYDKLYDFFRA---------------  253 (480)
T ss_pred             hh------hccchhHHHHHHHHHHhhHHHHcCchHHHHHHhhcccCCchhhhhccHHHHHHHHHH---------------
Confidence            11      11222222222111000000000011 000000000   000000111111111111               


Q ss_pred             CCCcHHHHHHHhcCCCCcccccchhhHHHhHhH-hhhhcccchHHHHHHHHHHHhhChh-HHHHHHHHHHHhccC-Cccc
Q 015436          168 VAKDMVDVLLLLADDPTLEVRLDRHSVKGFTLD-LIAGATETSTLMLEWAFAELVKNPE-ILDKATEELDRVIGK-ERWF  244 (407)
Q Consensus       168 ~~~d~~~~ll~~~~~~~~~~~~~~~~i~~~~~~-~~~aG~~tt~~~l~~~l~~l~~~p~-~q~~l~~Ei~~~~~~-~~~~  244 (407)
                          .++.++....+    .+++++++.++++. +.++|++|++++++|++++|++||+ +|++|++|++++++. ++.+
T Consensus       254 ----~~~~ll~~~~~----~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~  325 (480)
T PLN02648        254 ----SATEALDLAEK----FGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGV  325 (480)
T ss_pred             ----HHHHHHHHHHh----cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCC
Confidence                12233333322    24899999998875 4456677777899999999999995 999999999999863 4568


Q ss_pred             ccccCCCChhHHHHHHHhhcCCC-CCCCCcceeecceeec----ceeeCCCCEEEecchhhccCCCCCCCCCCCCCCccC
Q 015436          245 EEKDIVNLPFIEAIIKETMRLHG-APMLMPRMAREDCKVA----AYDILKGTQVLVNTWTIERDPALWENPNEFCPERFL  319 (407)
Q Consensus       245 ~~~~~~~lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~----g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l  319 (407)
                      +++++++||||++||+|+||++| ++... |.+.+|++++    ||.||||+.|.++.+.+||||++|+||++|+|+||+
T Consensus       326 t~~~l~~l~yl~avi~EtLRl~p~v~~~~-r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~  404 (480)
T PLN02648        326 TFAALEKMPLVKSVVYEALRIEPPVPFQY-GRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFM  404 (480)
T ss_pred             CHHHHhcCHHHHHHHHHHHhhcCCccccc-ceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCC
Confidence            99999999999999999999999 66655 8899999996    799999999999999999999999999999999998


Q ss_pred             CCCCCCCCCCCceecc---------CCCCCCCCChhHHHHHHHHHHHHhhhcce-eEcCCCC
Q 015436          320 GKSIDVKGNDFELLPF---------GAGRRMCPGYSNGLKVIQSSLANLLHGFT-WKLPGNM  371 (407)
Q Consensus       320 ~~~~~~~~~~~~~~~F---------g~G~r~C~G~~lA~~e~~~~la~ll~~~~-~~~~~~~  371 (407)
                      ++..+   ....+++|         |.|+|.|+|++||++|++++++.|+++|+ |++.++.
T Consensus       405 ~~~~~---~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~  463 (480)
T PLN02648        405 GEEGE---KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDT  463 (480)
T ss_pred             CCCcc---ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCc
Confidence            64321   11234444         66779999999999999999999999998 9987763


No 33 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=67.01  E-value=1.5  Score=35.89  Aligned_cols=42  Identities=24%  Similarity=0.250  Sum_probs=30.8

Q ss_pred             ChhHHHHHHHhhcCCC-CCCCCcceeecceeecceeeCCCCEEEe
Q 015436          252 LPFIEAIIKETMRLHG-APMLMPRMAREDCKVAAYDILKGTQVLV  295 (407)
Q Consensus       252 lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~g~~ip~G~~v~~  295 (407)
                      -....|||.|+.-+.. ....+ | ..+|+.++|..|||||.++.
T Consensus        52 ~n~I~A~V~~~qtv~~Gs~vrl-R-Lle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDGSRVRL-R-LLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCCCEEEE-E-EcCceEECCEEeCCCCEEEE
Confidence            3457899999987764 22222 2 36889999999999998865


No 34 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=47.83  E-value=20  Score=22.60  Aligned_cols=25  Identities=40%  Similarity=0.530  Sum_probs=19.3

Q ss_pred             HHHHHHhhChhHHHHHHHHHHHhcc
Q 015436          215 WAFAELVKNPEILDKATEELDRVIG  239 (407)
Q Consensus       215 ~~l~~l~~~p~~q~~l~~Ei~~~~~  239 (407)
                      -++.+|.+||++.++|.+.=.+.+|
T Consensus         4 ~iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCeeEec
Confidence            4678999999999999875555444


No 35 
>PRK06789 flagellar motor switch protein; Validated
Probab=46.62  E-value=20  Score=24.04  Aligned_cols=39  Identities=10%  Similarity=0.139  Sum_probs=31.9

Q ss_pred             HHHHhhcCCC-CCCCCcceeec--ceeecceeeCCCCEEEec
Q 015436          258 IIKETMRLHG-APMLMPRMARE--DCKVAAYDILKGTQVLVN  296 (407)
Q Consensus       258 ~i~E~lRl~p-~~~~~~R~~~~--d~~~~g~~ip~G~~v~~~  296 (407)
                      -++|.+.|.+ ....+-|.+.+  |..++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            3689999999 88888788855  456689999999999875


No 36 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=46.43  E-value=16  Score=27.62  Aligned_cols=22  Identities=18%  Similarity=0.300  Sum_probs=16.8

Q ss_pred             CCCChhHHHHHHHHHHHHhhhc
Q 015436          341 MCPGYSNGLKVIQSSLANLLHG  362 (407)
Q Consensus       341 ~C~G~~lA~~e~~~~la~ll~~  362 (407)
                      .|.|+.||..++-.++.+|+..
T Consensus        19 N~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   19 NCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             ETTS----HHHHHHHHHHHHHS
T ss_pred             cccchHHHHHHHHHHHHHHhcC
Confidence            7999999999999999999875


No 37 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=43.56  E-value=71  Score=19.37  Aligned_cols=42  Identities=29%  Similarity=0.262  Sum_probs=30.8

Q ss_pred             hHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHH
Q 015436          193 SVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEEL  234 (407)
Q Consensus       193 ~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei  234 (407)
                      ++...+..++-.|.|..+-.+.--|.+..-||+....+-.|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            345556667777777777777777777778888887777765


No 38 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=42.04  E-value=12  Score=23.05  Aligned_cols=10  Identities=50%  Similarity=1.102  Sum_probs=8.7

Q ss_pred             ccCCCCCCCC
Q 015436          334 PFGAGRRMCP  343 (407)
Q Consensus       334 ~Fg~G~r~C~  343 (407)
                      +||-|.|.|-
T Consensus        13 kfg~GsrsC~   22 (56)
T KOG3506|consen   13 KFGQGSRSCR   22 (56)
T ss_pred             ccCCCCccee
Confidence            5999999994


No 39 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=41.24  E-value=29  Score=18.78  Aligned_cols=16  Identities=31%  Similarity=0.698  Sum_probs=13.1

Q ss_pred             CCCceeccCCCCCCCC
Q 015436          328 NDFELLPFGAGRRMCP  343 (407)
Q Consensus       328 ~~~~~~~Fg~G~r~C~  343 (407)
                      .+..|+|+.+..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            3468999999999994


No 40 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=41.00  E-value=5.8  Score=36.46  Aligned_cols=44  Identities=20%  Similarity=0.165  Sum_probs=31.6

Q ss_pred             CChhHHHHHHHhhcCCCCCCCCcce-eecceeecceeeCCCCEEEec
Q 015436          251 NLPFIEAIIKETMRLHGAPMLMPRM-AREDCKVAAYDILKGTQVLVN  296 (407)
Q Consensus       251 ~lp~L~a~i~E~lRl~p~~~~~~R~-~~~d~~~~g~~ip~G~~v~~~  296 (407)
                      .-..+.|||.|+.-+.- -..+ |. ..+|+.++|..||+||.|+..
T Consensus       254 ~~n~I~A~V~~~qtv~~-G~~v-rlRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       254 ERNTIRACVHETQTVVD-GSAV-KLRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCCceEEEEcCceEEec-CCEE-EEEEcCceeeCCEEecCCCEEEEE
Confidence            34568899999987764 1112 32 368999999999999987653


No 41 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=39.86  E-value=51  Score=29.22  Aligned_cols=70  Identities=21%  Similarity=0.348  Sum_probs=42.5

Q ss_pred             HHHHHHHhhcCCCC----CCCCcceeecceee--c--ceeeCCCCEEEecchhhccCCCCCCCCCCCCCCccCCCCCCCC
Q 015436          255 IEAIIKETMRLHGA----PMLMPRMAREDCKV--A--AYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDVK  326 (407)
Q Consensus       255 L~a~i~E~lRl~p~----~~~~~R~~~~d~~~--~--g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~  326 (407)
                      -+.+|+.+..+.|+    |+-+.-.++.|..+  =  .-+|..||.|.++                              
T Consensus       275 ger~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~------------------------------  324 (361)
T COG1759         275 GERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG------------------------------  324 (361)
T ss_pred             HHHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC------------------------------
Confidence            35677777788872    33332333444333  1  3478888877664                              


Q ss_pred             CCCCceeccCCCCCCCCChhHHHHHHHHHHH
Q 015436          327 GNDFELLPFGAGRRMCPGYSNGLKVIQSSLA  357 (407)
Q Consensus       327 ~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la  357 (407)
                      .++++++-||.+  +-+|+++|. |+|.++-
T Consensus       325 GspYs~l~~~~p--ms~GrRIA~-EIk~A~e  352 (361)
T COG1759         325 GSPYSNLYWGEP--MSTGRRIAR-EIKEAIE  352 (361)
T ss_pred             CCcchhhhcCCC--cchhhHHHH-HHHHHHH
Confidence            133455556655  667999998 8887753


No 42 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=38.12  E-value=9.7  Score=30.11  Aligned_cols=36  Identities=28%  Similarity=0.541  Sum_probs=25.2

Q ss_pred             CCCCCCccCCCCCCCCCCCCceeccCCCCCCCCChh
Q 015436          311 NEFCPERFLGKSIDVKGNDFELLPFGAGRRMCPGYS  346 (407)
Q Consensus       311 ~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~  346 (407)
                      .+++|++|-.-=.....+....+-|.+|+-.|.|..
T Consensus        35 aeYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGaK   70 (185)
T COG2101          35 AEYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGAK   70 (185)
T ss_pred             CccCHhHCCeeEEEecCCcceEEEEecCcEEEeccC
Confidence            378888884211122335568999999999999975


No 43 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=34.99  E-value=64  Score=18.40  Aligned_cols=19  Identities=21%  Similarity=0.387  Sum_probs=12.4

Q ss_pred             HHHHHHHh-hChhHHHHHHH
Q 015436          214 EWAFAELV-KNPEILDKATE  232 (407)
Q Consensus       214 ~~~l~~l~-~~p~~q~~l~~  232 (407)
                      -..+..++ +||++++.++.
T Consensus        16 ~~lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   16 QSLLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHHHhChhHHHHHHh
Confidence            33444444 79999888764


No 44 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=29.22  E-value=38  Score=23.39  Aligned_cols=20  Identities=25%  Similarity=0.692  Sum_probs=17.4

Q ss_pred             HHHHHHHHhhhcceeEcCCC
Q 015436          351 VIQSSLANLLHGFTWKLPGN  370 (407)
Q Consensus       351 e~~~~la~ll~~~~~~~~~~  370 (407)
                      -|+-++..+|+-|||++++-
T Consensus        61 ~IrdAVsqVLkGYDWtLVPm   80 (84)
T PF12444_consen   61 CIRDAVSQVLKGYDWTLVPM   80 (84)
T ss_pred             HHHHHHHHHhccCCceeeec
Confidence            47889999999999999763


No 45 
>TIGR00589 ogt O-6-methylguanine DNA methyltransferase. All proteins in this family for which functions are known are involved alkyl-DNA transferases which remove alkyl groups from DNA as part of alkylation DNA repair. Some of the proteins in this family are also transcription regulators and have a distinct transcription regulatory domain. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=27.90  E-value=70  Score=21.88  Aligned_cols=60  Identities=10%  Similarity=0.062  Sum_probs=39.0

Q ss_pred             hHHHHHHHHHHHhccCCcccccccCCC---ChhHHHHHHHhhcCCCCCCC--Ccceeecceeecce
Q 015436          225 EILDKATEELDRVIGKERWFEEKDIVN---LPFIEAIIKETMRLHGAPML--MPRMAREDCKVAAY  285 (407)
Q Consensus       225 ~~q~~l~~Ei~~~~~~~~~~~~~~~~~---lp~L~a~i~E~lRl~p~~~~--~~R~~~~d~~~~g~  285 (407)
                      +.|+++++.+.+ ++.+...||.++.+   .|---..|--+++-.|.+..  ..|+...+-.++||
T Consensus         2 ~f~~~V~~~l~~-IP~G~v~TYg~iA~~~g~p~~~RaVg~al~~np~~~~iPcHRVv~s~G~l~~y   66 (80)
T TIGR00589         2 PFQQRVWQALRT-IPYGETKSYGQLAARIGNPKAVRAVGGANGRNPLAILVPCHRVIGKNGSLTGY   66 (80)
T ss_pred             hHHHHHHHHHhC-CCCCCcCCHHHHHHHhCCCChHHHHHHHHHhCCCCCCCCCceeECCCCCCCCC
Confidence            467788888876 45566677776643   34444566677888883323  34777777777776


No 46 
>COG3954 PrkB Phosphoribulokinase [Energy production and conversion]
Probab=27.72  E-value=1.4e+02  Score=24.38  Aligned_cols=64  Identities=14%  Similarity=0.167  Sum_probs=37.2

Q ss_pred             hhhcccchHHHHHHHHHHHhhChhHHH----------HHHHHHHHhccCCccccc--ccCCCChhHHHHHHHhhcC
Q 015436          202 IAGATETSTLMLEWAFAELVKNPEILD----------KATEELDRVIGKERWFEE--KDIVNLPFIEAIIKETMRL  265 (407)
Q Consensus       202 ~~aG~~tt~~~l~~~l~~l~~~p~~q~----------~l~~Ei~~~~~~~~~~~~--~~~~~lp~L~a~i~E~lRl  265 (407)
                      -.||+.||+.+..-++..+..++.+.+          ....+|..+-..+..+++  ...+.++.|+.++.|--|.
T Consensus        14 SGAGTTTts~aFrKiF~~~~I~aa~iEGDsFHR~tRpeMd~~Irkar~~GrhisyFgpeANdf~~LE~~f~eYg~~   89 (289)
T COG3954          14 SGAGTTTTSLAFRKIFAQLNIHAAEVEGDSFHRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLEQTFIEYGQS   89 (289)
T ss_pred             CCCCcccHHHHHHHHHHhcCccHhhhccccccccCchhHHHHHHHHHHcCCcceecCccccchHHHHHHHHHhccc
Confidence            346777777777777777776654432          222333322222334443  3446788899888885443


No 47 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=27.42  E-value=1e+02  Score=21.44  Aligned_cols=41  Identities=20%  Similarity=0.301  Sum_probs=24.4

Q ss_pred             HhhhhcccchHHHHHHHHHHHhh-------ChhHHHHHHHHHHHhccC
Q 015436          200 DLIAGATETSTLMLEWAFAELVK-------NPEILDKATEELDRVIGK  240 (407)
Q Consensus       200 ~~~~aG~~tt~~~l~~~l~~l~~-------~p~~q~~l~~Ei~~~~~~  240 (407)
                      .+++.-..+|+.+..--|-.+..       .|++...+|+||-+++.+
T Consensus         5 dff~~r~~~Sa~~AkeRLQiilA~eR~~~~~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851           5 DFFFSRKKNSAETAKERLQLILAHERAAGLQPDYLEQLRKEILEVISK   52 (88)
T ss_pred             HHHHhcCCCcHHHHHHHHHHhhhhhhhcCCCcchHHHHHHHHHHHHHH
Confidence            34443333555555544443333       278889999999887654


No 48 
>PF13993 YccJ:  YccJ-like protein
Probab=26.96  E-value=83  Score=19.97  Aligned_cols=31  Identities=26%  Similarity=0.272  Sum_probs=23.2

Q ss_pred             hcccchHHHHHHHHHHHhhChh-HHHHHHHHH
Q 015436          204 GATETSTLMLEWAFAELVKNPE-ILDKATEEL  234 (407)
Q Consensus       204 aG~~tt~~~l~~~l~~l~~~p~-~q~~l~~Ei  234 (407)
                      |..-.|+.-++-++++|+++.+ .-+++++|=
T Consensus         9 A~~ReTS~EIAeAIFElA~~dE~lAekIWeeG   40 (69)
T PF13993_consen    9 ANVRETSIEIAEAIFELANNDEVLAEKIWEEG   40 (69)
T ss_pred             HHHhcCCHHHHHHHHHHhcccHHHHHHHHHcc
Confidence            4455677788889999999988 446777754


No 49 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=26.34  E-value=60  Score=25.20  Aligned_cols=22  Identities=18%  Similarity=0.255  Sum_probs=18.3

Q ss_pred             eecceeecceeeCCCCEEEecc
Q 015436          276 AREDCKVAAYDILKGTQVLVNT  297 (407)
Q Consensus       276 ~~~d~~~~g~~ip~G~~v~~~~  297 (407)
                      ..+|+.++|..||+|+.-+..+
T Consensus        52 f~~dv~igGk~l~AG~Ysl~ti   73 (145)
T PF11138_consen   52 FSKDVTIGGKKLKAGTYSLFTI   73 (145)
T ss_pred             ECCCeEECCEEcCCeeEEEEEe
Confidence            3679999999999999876654


No 50 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=25.21  E-value=2.4e+02  Score=19.52  Aligned_cols=49  Identities=10%  Similarity=0.059  Sum_probs=40.2

Q ss_pred             chhhHHHhHhHhhhhcccchHHHHHHHHHHHhhChhHHHHHHHHHHHhc
Q 015436          190 DRHSVKGFTLDLIAGATETSTLMLEWAFAELVKNPEILDKATEELDRVI  238 (407)
Q Consensus       190 ~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~  238 (407)
                      ............++--+.+++....-.+.+-++||+..+++.+.+..-+
T Consensus        30 ~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   30 SSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             cHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            3445555667788889999999999999999999999999998887654


No 51 
>PRK05933 type III secretion system protein; Validated
Probab=24.77  E-value=65  Score=28.58  Aligned_cols=42  Identities=10%  Similarity=0.128  Sum_probs=34.2

Q ss_pred             HHHHHHHhhcCCC-CCCCCccee---ecceeecceeeCCCCEEEec
Q 015436          255 IEAIIKETMRLHG-APMLMPRMA---REDCKVAAYDILKGTQVLVN  296 (407)
Q Consensus       255 L~a~i~E~lRl~p-~~~~~~R~~---~~d~~~~g~~ip~G~~v~~~  296 (407)
                      ..--|+|.|+|.+ ....+-|.+   .-|+.++|..|.+|..|.++
T Consensus       317 T~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVd  362 (372)
T PRK05933        317 YSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALG  362 (372)
T ss_pred             ccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEEC
Confidence            5566899999999 777776654   35677899999999999885


No 52 
>PHA01346 hypothetical protein
Probab=23.61  E-value=63  Score=18.62  Aligned_cols=17  Identities=29%  Similarity=0.581  Sum_probs=13.1

Q ss_pred             Chh-HHHHHHHHHHHhcc
Q 015436          223 NPE-ILDKATEELDRVIG  239 (407)
Q Consensus       223 ~p~-~q~~l~~Ei~~~~~  239 (407)
                      .|+ -|+|+.+|+++.+.
T Consensus        29 dpdfsqekihaeldsllr   46 (53)
T PHA01346         29 DPDFSQEKIHAELDSLLR   46 (53)
T ss_pred             CCCccHHHHHHHHHHHHH
Confidence            566 78899999987653


No 53 
>COG5598 Trimethylamine:corrinoid methyltransferase [Coenzyme metabolism]
Probab=22.98  E-value=1.5e+02  Score=28.26  Aligned_cols=71  Identities=15%  Similarity=0.185  Sum_probs=49.6

Q ss_pred             ChhHHHHHHHhhcCCC-CCCCCcceeecceeecceeeCCCCEEEecchhhccCCCCCCCCCCCCCCccCCCCCCCCCCCC
Q 015436          252 LPFIEAIIKETMRLHG-APMLMPRMAREDCKVAAYDILKGTQVLVNTWTIERDPALWENPNEFCPERFLGKSIDVKGNDF  330 (407)
Q Consensus       252 lp~L~a~i~E~lRl~p-~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~  330 (407)
                      .-+=.+.++|.|+..| ..+...|-..+|++++|-.                                           -
T Consensus        99 Vr~~r~lv~~~l~~aps~ftl~aRnp~r~v~igG~~-------------------------------------------v  135 (526)
T COG5598          99 VRFPRGLVREALKSAPSSFTLHARNPKRDVQIGGNN-------------------------------------------V  135 (526)
T ss_pred             EeecHHHHHHHHHhCchhheeccCCcccceeecCce-------------------------------------------e
Confidence            3344888999999888 6666667666676666543                                           2


Q ss_pred             ceeccCCCCCCC---CChhHHHHHHHHHHHHhhhccee
Q 015436          331 ELLPFGAGRRMC---PGYSNGLKVIQSSLANLLHGFTW  365 (407)
Q Consensus       331 ~~~~Fg~G~r~C---~G~~lA~~e~~~~la~ll~~~~~  365 (407)
                      .|.|++++++.|   =|++-+..+-..=+++|.+.++.
T Consensus       136 ~f~~~~gap~v~Dl~~grr~gtl~D~~n~~kLa~~~~~  173 (526)
T COG5598         136 HFGPAYGAPNVRDLDKGRRYGTLEDYRNLAKLAQHAPN  173 (526)
T ss_pred             EEEecCCCceeeeccCCcccchHHHHHHHHHHHhhcch
Confidence            455666666666   37777788888888888888753


No 54 
>cd04518 TBP_archaea archaeal TATA box binding protein (TBP): TBPs are transcription factors present in archaea and eukaryotes, that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=22.94  E-value=19  Score=29.02  Aligned_cols=35  Identities=26%  Similarity=0.589  Sum_probs=25.0

Q ss_pred             CCCCCCccCCCCCCCCCCCCceeccCCCCCCCCCh
Q 015436          311 NEFCPERFLGKSIDVKGNDFELLPFGAGRRMCPGY  345 (407)
Q Consensus       311 ~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~  345 (407)
                      -+|+|+||-.--.....+....+-|++|+=.|.|-
T Consensus        29 ~eY~P~~fpgli~Rl~~Pk~t~lIF~SGKiv~tGa   63 (174)
T cd04518          29 AEYNPDQFPGLVYRLEDPKIAALIFRSGKMVCTGA   63 (174)
T ss_pred             cEECCCcCcEEEEEccCCcEEEEEECCCeEEEEcc
Confidence            48899998532112223556789999999999987


No 55 
>cd04516 TBP_eukaryotes eukaryotic TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=22.11  E-value=40  Score=27.16  Aligned_cols=57  Identities=19%  Similarity=0.405  Sum_probs=33.2

Q ss_pred             CCCCCCccCCCCCCCCCCCCceeccCCCCCCCCC-hhHHHHH-HHHHHHHhhhcceeEc
Q 015436          311 NEFCPERFLGKSIDVKGNDFELLPFGAGRRMCPG-YSNGLKV-IQSSLANLLHGFTWKL  367 (407)
Q Consensus       311 ~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G-~~lA~~e-~~~~la~ll~~~~~~~  367 (407)
                      -+|+|++|-.--.....+....+-|++|+=.|.| +.-.... ..--++.+|+++.+..
T Consensus        29 ~eYePe~fpgli~Rl~~Pk~t~lIF~SGKiviTGaks~e~a~~a~~~i~~~L~~~g~~~   87 (174)
T cd04516          29 AEYNPKRFAAVIMRIREPKTTALIFSSGKMVCTGAKSEDDSKLAARKYARIIQKLGFPA   87 (174)
T ss_pred             CEECCccCcEEEEEeCCCcEEEEEECCCeEEEEecCCHHHHHHHHHHHHHHHHHcCCCC
Confidence            5889998853111222344567899999999998 3332111 2233345566665543


No 56 
>PLN00062 TATA-box-binding protein; Provisional
Probab=22.10  E-value=44  Score=27.04  Aligned_cols=55  Identities=20%  Similarity=0.442  Sum_probs=33.4

Q ss_pred             CCCCCCccCCCCCCCCCCCCceeccCCCCCCCCCh-hHHHH-HHHHHHHHhhhccee
Q 015436          311 NEFCPERFLGKSIDVKGNDFELLPFGAGRRMCPGY-SNGLK-VIQSSLANLLHGFTW  365 (407)
Q Consensus       311 ~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~-~lA~~-e~~~~la~ll~~~~~  365 (407)
                      -+|+|+||-.--.....+....+-|++|+=.|.|. ..... ...--++.+|++..+
T Consensus        29 ~eYePe~fpgli~Rl~~Pk~t~lIF~SGKiviTGaks~e~a~~a~~~~~~~L~~lg~   85 (179)
T PLN00062         29 AEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEHDSKLAARKYARIIQKLGF   85 (179)
T ss_pred             CEECCccCcEEEEEeCCCcEEEEEECCCeEEEEecCCHHHHHHHHHHHHHHHHHcCC
Confidence            58899998532112223456789999999999985 33222 123344455666555


No 57 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=21.87  E-value=60  Score=24.35  Aligned_cols=21  Identities=38%  Similarity=0.433  Sum_probs=17.2

Q ss_pred             eeecceeecceeeCCCCEEEe
Q 015436          275 MAREDCKVAAYDILKGTQVLV  295 (407)
Q Consensus       275 ~~~~d~~~~g~~ip~G~~v~~  295 (407)
                      +++.|.+++|-.||+|+.|..
T Consensus        72 I~~~d~~~~g~~i~~GtWv~~   92 (122)
T PF14550_consen   72 IAPEDMEIGGETIPKGTWVVG   92 (122)
T ss_pred             ecCCCcccCCeeecceEEEEE
Confidence            345689999999999999854


No 58 
>PF10763 DUF2584:  Protein of unknown function (DUF2584);  InterPro: IPR019699 This entry is represented by Bacteriophage 0305phi8-36, Orf221. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.; PDB: 2NWA_F.
Probab=21.54  E-value=15  Score=24.76  Aligned_cols=24  Identities=21%  Similarity=0.224  Sum_probs=11.0

Q ss_pred             HHHhhcCCC--CCCCCcceeecceeec
Q 015436          259 IKETMRLHG--APMLMPRMAREDCKVA  283 (407)
Q Consensus       259 i~E~lRl~p--~~~~~~R~~~~d~~~~  283 (407)
                      .+|..|+||  +|.-+ |.+...-.+|
T Consensus        28 ~KeGYRiyPldvPl~l-~kt~~~e~~g   53 (80)
T PF10763_consen   28 EKEGYRIYPLDVPLPL-RKTKWGEASG   53 (80)
T ss_dssp             EEES-EE--SSSEEEE-ESS----EEE
T ss_pred             EeCcEEEEeccCcEEE-EEcccCccce
Confidence            379999999  66666 6555533333


No 59 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=21.52  E-value=60  Score=20.69  Aligned_cols=7  Identities=57%  Similarity=0.890  Sum_probs=5.5

Q ss_pred             CCCccCC
Q 015436          314 CPERFLG  320 (407)
Q Consensus       314 ~P~R~l~  320 (407)
                      ||||||.
T Consensus        44 DPERWLP   50 (59)
T PF08492_consen   44 DPERWLP   50 (59)
T ss_pred             CccccCc
Confidence            7888884


Done!