Query 015438
Match_columns 407
No_of_seqs 552 out of 4232
Neff 10.8
Searched_HMMs 29240
Date Mon Mar 25 12:37:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015438.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015438hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 4.6E-40 1.6E-44 306.5 32.6 261 102-389 128-408 (410)
2 2ynn_A Coatomer subunit beta'; 100.0 7.8E-40 2.7E-44 292.7 31.9 264 116-406 5-282 (304)
3 1got_B GT-beta; complex (GTP-b 100.0 1.4E-39 4.6E-44 295.8 33.5 266 117-407 48-325 (340)
4 1vyh_C Platelet-activating fac 100.0 9.8E-40 3.4E-44 304.3 33.3 261 117-407 101-393 (410)
5 2pbi_B Guanine nucleotide-bind 100.0 3.3E-39 1.1E-43 294.8 33.9 270 117-407 57-339 (354)
6 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.4E-39 1.1E-43 293.8 32.8 268 118-406 9-315 (345)
7 3frx_A Guanine nucleotide-bind 100.0 5.1E-39 1.7E-43 289.3 33.1 264 118-407 11-299 (319)
8 3ow8_A WD repeat-containing pr 100.0 4E-39 1.4E-43 290.1 32.0 261 119-407 27-303 (321)
9 3ow8_A WD repeat-containing pr 100.0 5.5E-39 1.9E-43 289.2 30.2 260 102-389 56-318 (321)
10 4gqb_B Methylosome protein 50; 100.0 4.8E-39 1.7E-43 291.9 28.8 245 122-392 80-331 (344)
11 2xzm_R RACK1; ribosome, transl 100.0 5.5E-38 1.9E-42 285.6 34.4 265 117-407 14-322 (343)
12 3iz6_a 40S ribosomal protein R 100.0 2.4E-39 8.3E-44 298.7 25.1 273 117-407 59-357 (380)
13 4gqb_B Methylosome protein 50; 100.0 1.7E-38 5.9E-43 288.3 27.1 263 121-407 27-312 (344)
14 2ynn_A Coatomer subunit beta'; 100.0 5.1E-38 1.8E-42 280.9 29.8 263 102-390 33-300 (304)
15 1got_B GT-beta; complex (GTP-b 100.0 1.7E-37 5.9E-42 281.9 33.4 262 102-389 75-340 (340)
16 4ery_A WD repeat-containing pr 100.0 5E-37 1.7E-41 275.5 36.0 263 118-407 17-292 (312)
17 2pm7_B Protein transport prote 100.0 4.8E-37 1.6E-41 273.6 31.2 259 119-392 4-285 (297)
18 4g56_B MGC81050 protein; prote 100.0 1.3E-37 4.3E-42 284.6 27.6 263 121-406 39-324 (357)
19 1nr0_A Actin interacting prote 100.0 4E-37 1.4E-41 301.2 32.8 281 102-406 37-379 (611)
20 2hes_X YDR267CP; beta-propelle 100.0 3.7E-37 1.3E-41 278.6 30.1 271 118-404 8-305 (330)
21 2pbi_B Guanine nucleotide-bind 100.0 2.7E-36 9.1E-41 275.5 32.4 284 81-389 55-354 (354)
22 1nr0_A Actin interacting prote 100.0 2.1E-36 7.1E-41 296.1 32.0 298 102-407 168-594 (611)
23 4g56_B MGC81050 protein; prote 100.0 1.3E-36 4.5E-41 277.8 26.2 247 120-392 90-343 (357)
24 3bg1_A Protein SEC13 homolog; 100.0 1E-36 3.5E-41 273.9 24.5 258 118-391 7-292 (316)
25 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.1E-36 2.4E-40 271.8 30.3 276 103-393 37-336 (345)
26 1erj_A Transcriptional repress 100.0 1.2E-35 4.1E-40 275.2 31.9 259 122-404 62-362 (393)
27 3ei3_B DNA damage-binding prot 100.0 4E-35 1.4E-39 270.7 35.0 271 118-407 67-365 (383)
28 1erj_A Transcriptional repress 100.0 1.7E-35 6E-40 274.1 30.5 242 125-391 124-388 (393)
29 3frx_A Guanine nucleotide-bind 100.0 3.6E-35 1.2E-39 264.2 31.5 262 102-390 38-315 (319)
30 3dm0_A Maltose-binding peripla 100.0 1.2E-35 4.2E-40 295.1 31.3 248 119-391 377-631 (694)
31 4aow_A Guanine nucleotide-bind 100.0 4.3E-35 1.5E-39 265.7 32.1 264 119-407 33-319 (340)
32 4e54_B DNA damage-binding prot 100.0 2E-35 6.9E-40 277.5 30.0 272 119-407 114-413 (435)
33 3iz6_a 40S ribosomal protein R 100.0 1.8E-36 6.3E-41 279.4 22.2 274 102-391 86-374 (380)
34 2hes_X YDR267CP; beta-propelle 100.0 2E-35 6.7E-40 267.2 27.5 255 122-391 56-327 (330)
35 2xzm_R RACK1; ribosome, transl 100.0 1.5E-34 5.2E-39 262.9 32.7 265 102-390 47-338 (343)
36 4ery_A WD repeat-containing pr 100.0 1.1E-34 3.8E-39 260.1 31.0 262 102-391 43-311 (312)
37 3jrp_A Fusion protein of prote 100.0 9.1E-35 3.1E-39 267.3 30.5 261 116-391 3-286 (379)
38 2j04_B YDR362CP, TAU91; beta p 100.0 1.3E-35 4.6E-40 282.7 25.1 279 104-406 183-495 (524)
39 3zwl_B Eukaryotic translation 100.0 2.2E-34 7.6E-39 263.6 31.9 258 118-407 26-328 (369)
40 1gxr_A ESG1, transducin-like e 100.0 2E-34 7E-39 260.6 30.8 263 119-407 46-319 (337)
41 2ymu_A WD-40 repeat protein; u 100.0 3.7E-34 1.3E-38 278.5 34.4 260 113-407 292-562 (577)
42 3dwl_C Actin-related protein 2 100.0 2.1E-36 7.1E-41 278.7 17.1 256 119-391 6-280 (377)
43 3vl1_A 26S proteasome regulato 100.0 2.9E-34 1E-38 268.1 29.6 277 103-407 77-398 (420)
44 1k8k_C P40, ARP2/3 complex 41 100.0 1.1E-34 3.8E-39 266.3 25.9 254 119-392 3-274 (372)
45 2pm9_A Protein WEB1, protein t 100.0 1.6E-34 5.6E-39 269.3 26.1 274 103-391 44-336 (416)
46 3f3f_A Nucleoporin SEH1; struc 100.0 1.1E-33 3.7E-38 256.6 27.3 265 117-392 4-337 (351)
47 2ymu_A WD-40 repeat protein; u 100.0 2.8E-33 9.5E-38 272.3 31.8 250 106-389 327-577 (577)
48 4a11_B DNA excision repair pro 100.0 2.1E-33 7.3E-38 260.8 28.9 286 100-407 19-347 (408)
49 1gxr_A ESG1, transducin-like e 100.0 2E-32 6.7E-37 247.6 34.3 258 103-389 71-334 (337)
50 2pm9_A Protein WEB1, protein t 100.0 1.9E-34 6.4E-39 268.9 21.5 276 103-392 88-414 (416)
51 3dm0_A Maltose-binding peripla 100.0 4.4E-33 1.5E-37 276.8 31.7 266 102-390 403-691 (694)
52 2aq5_A Coronin-1A; WD40 repeat 100.0 5.7E-33 2E-37 258.1 30.2 257 116-393 73-343 (402)
53 3odt_A Protein DOA1; ubiquitin 100.0 6.2E-33 2.1E-37 248.3 29.2 259 117-407 11-279 (313)
54 3zwl_B Eukaryotic translation 100.0 1.8E-32 6.1E-37 250.9 33.0 272 102-392 52-346 (369)
55 3mkq_A Coatomer beta'-subunit; 100.0 2.4E-33 8.2E-38 283.7 29.8 263 117-406 6-282 (814)
56 3k26_A Polycomb protein EED; W 100.0 1.8E-33 6.3E-38 257.3 26.2 266 119-407 13-348 (366)
57 3dw8_B Serine/threonine-protei 100.0 4.6E-33 1.6E-37 262.1 29.4 262 122-391 26-372 (447)
58 3k26_A Polycomb protein EED; W 100.0 5E-34 1.7E-38 261.1 21.1 267 105-390 45-364 (366)
59 1r5m_A SIR4-interacting protei 100.0 8.2E-33 2.8E-37 258.1 29.7 243 121-390 42-359 (425)
60 3ei3_B DNA damage-binding prot 100.0 4E-33 1.4E-37 257.3 27.2 263 103-392 95-382 (383)
61 1k8k_C P40, ARP2/3 complex 41 100.0 7.1E-33 2.4E-37 254.2 28.3 270 103-391 29-360 (372)
62 1sq9_A Antiviral protein SKI8; 100.0 1E-33 3.6E-38 262.3 22.8 277 102-391 34-394 (397)
63 2pm7_B Protein transport prote 100.0 1.3E-32 4.4E-37 245.0 28.8 230 102-347 29-285 (297)
64 2j04_B YDR362CP, TAU91; beta p 100.0 1E-33 3.6E-38 269.7 22.3 270 123-407 132-456 (524)
65 1r5m_A SIR4-interacting protei 100.0 1.5E-32 5E-37 256.4 29.4 253 123-389 107-422 (425)
66 3i2n_A WD repeat-containing pr 100.0 6.3E-33 2.1E-37 253.0 26.1 265 119-407 13-334 (357)
67 1sq9_A Antiviral protein SKI8; 100.0 4.2E-33 1.4E-37 258.2 25.3 245 118-389 10-319 (397)
68 3dwl_C Actin-related protein 2 100.0 9.9E-34 3.4E-38 260.7 20.9 226 102-346 31-280 (377)
69 4h5i_A Guanine nucleotide-exch 100.0 2.8E-32 9.7E-37 249.8 30.2 204 121-348 130-344 (365)
70 3jro_A Fusion protein of prote 100.0 6E-33 2.1E-37 277.6 27.7 259 118-391 3-284 (753)
71 3vl1_A 26S proteasome regulato 100.0 1.4E-32 4.9E-37 256.7 27.7 279 103-390 118-417 (420)
72 3mmy_A MRNA export factor; mRN 100.0 1.1E-32 3.6E-37 252.3 26.3 253 111-388 26-342 (368)
73 4aez_A CDC20, WD repeat-contai 100.0 2.5E-32 8.5E-37 253.7 28.9 263 102-392 111-380 (401)
74 3gre_A Serine/threonine-protei 100.0 1.3E-33 4.4E-38 265.3 20.3 264 118-391 56-358 (437)
75 3v7d_B Cell division control p 100.0 5.3E-32 1.8E-36 256.3 31.0 272 102-391 140-420 (464)
76 4e54_B DNA damage-binding prot 100.0 6.2E-33 2.1E-37 260.5 23.9 265 102-392 140-430 (435)
77 4aez_A CDC20, WD repeat-contai 100.0 6.3E-32 2.1E-36 251.0 29.4 254 122-407 89-362 (401)
78 4h5i_A Guanine nucleotide-exch 100.0 1.1E-32 3.7E-37 252.5 23.9 198 171-390 135-341 (365)
79 3odt_A Protein DOA1; ubiquitin 100.0 3.4E-32 1.2E-36 243.5 26.6 258 102-392 37-296 (313)
80 3i2n_A WD repeat-containing pr 100.0 1.5E-32 5E-37 250.6 23.6 270 103-392 43-353 (357)
81 1yfq_A Cell cycle arrest prote 100.0 4.6E-32 1.6E-36 246.0 26.0 248 120-391 7-281 (342)
82 2aq5_A Coronin-1A; WD40 repeat 100.0 4.9E-32 1.7E-36 251.8 25.5 266 125-406 35-325 (402)
83 3mkq_A Coatomer beta'-subunit; 100.0 5.5E-32 1.9E-36 273.7 27.7 263 103-392 34-302 (814)
84 2xyi_A Probable histone-bindin 100.0 3.9E-32 1.3E-36 254.7 24.6 261 119-392 123-410 (430)
85 3dw8_B Serine/threonine-protei 100.0 4.5E-32 1.6E-36 255.3 25.2 259 117-391 74-445 (447)
86 3bg1_A Protein SEC13 homolog; 100.0 2.3E-32 8E-37 245.5 22.1 232 102-347 33-293 (316)
87 3sfz_A APAF-1, apoptotic pepti 100.0 2.2E-31 7.6E-36 281.0 31.9 248 118-389 609-910 (1249)
88 2j04_A TAU60, YPL007P, hypothe 100.0 3.2E-32 1.1E-36 254.0 21.8 248 115-407 75-343 (588)
89 1pgu_A Actin interacting prote 100.0 5.7E-31 2E-35 257.7 30.9 263 103-389 38-325 (615)
90 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.4E-31 8.2E-36 250.8 26.8 261 124-405 4-365 (450)
91 4aow_A Guanine nucleotide-bind 100.0 2.5E-30 8.7E-35 234.2 32.6 265 102-391 59-336 (340)
92 2oaj_A Protein SNI1; WD40 repe 100.0 3.8E-31 1.3E-35 268.4 28.6 242 121-389 14-309 (902)
93 4gga_A P55CDC, cell division c 100.0 2.2E-30 7.4E-35 242.1 31.5 262 101-391 122-394 (420)
94 3v7d_B Cell division control p 100.0 1.3E-30 4.3E-35 246.8 29.5 241 118-392 115-381 (464)
95 3lrv_A PRE-mRNA-splicing facto 100.0 2.3E-31 7.9E-36 241.9 23.2 253 131-404 43-309 (343)
96 3sfz_A APAF-1, apoptotic pepti 100.0 7.9E-31 2.7E-35 276.8 30.8 280 102-407 635-1016(1249)
97 3f3f_A Nucleoporin SEH1; struc 100.0 1.2E-30 4.1E-35 236.6 27.2 246 103-352 32-342 (351)
98 3gre_A Serine/threonine-protei 100.0 1E-30 3.5E-35 245.6 25.7 234 102-354 84-366 (437)
99 4ggc_A P55CDC, cell division c 100.0 8.4E-30 2.9E-34 228.5 30.5 254 127-392 28-315 (318)
100 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.1E-30 1.1E-34 243.2 28.0 249 120-390 98-389 (450)
101 2ovr_B FBW7, F-BOX/WD repeat p 100.0 8.5E-30 2.9E-34 239.9 30.9 269 102-406 137-419 (445)
102 4gga_A P55CDC, cell division c 100.0 1.2E-29 4.1E-34 237.1 31.6 253 126-407 107-377 (420)
103 1p22_A F-BOX/WD-repeat protein 100.0 4.1E-30 1.4E-34 241.4 28.5 259 102-392 151-414 (435)
104 4gq1_A NUP37; propeller, trans 100.0 1.8E-31 6.2E-36 247.0 18.9 246 120-389 85-386 (393)
105 3jrp_A Fusion protein of prote 100.0 2.7E-30 9.4E-35 237.4 25.9 230 103-348 32-288 (379)
106 3vu4_A KMHSV2; beta-propeller 100.0 1.2E-29 4E-34 231.6 29.0 259 118-389 13-333 (355)
107 4ggc_A P55CDC, cell division c 100.0 2.2E-29 7.6E-34 225.8 30.1 230 102-349 43-317 (318)
108 2xyi_A Probable histone-bindin 100.0 1.4E-29 4.9E-34 237.2 29.0 222 114-348 171-411 (430)
109 4a11_B DNA excision repair pro 100.0 5.6E-29 1.9E-33 230.9 32.5 231 103-354 65-372 (408)
110 1yfq_A Cell cycle arrest prote 100.0 3E-30 1E-34 234.0 23.0 252 102-384 31-315 (342)
111 2j04_A TAU60, YPL007P, hypothe 100.0 9.2E-31 3.2E-35 244.2 17.9 237 122-406 13-279 (588)
112 1pgu_A Actin interacting prote 100.0 8.6E-30 3E-34 249.3 25.5 246 122-392 16-283 (615)
113 3lrv_A PRE-mRNA-splicing facto 100.0 8E-30 2.7E-34 231.7 23.0 265 102-404 56-343 (343)
114 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1E-28 3.5E-33 232.5 29.1 246 102-381 177-426 (445)
115 2oaj_A Protein SNI1; WD40 repe 100.0 9.4E-29 3.2E-33 250.9 29.6 200 122-337 56-297 (902)
116 1p22_A F-BOX/WD-repeat protein 100.0 2.1E-28 7.2E-33 229.7 28.9 230 121-389 130-362 (435)
117 3jro_A Fusion protein of prote 100.0 4.6E-29 1.6E-33 249.5 24.4 231 103-348 30-286 (753)
118 2w18_A PALB2, fancn, partner a 100.0 1.9E-28 6.6E-33 215.1 21.7 199 124-345 111-355 (356)
119 4gq1_A NUP37; propeller, trans 100.0 1.4E-28 4.9E-33 227.6 21.6 238 102-347 109-389 (393)
120 3mmy_A MRNA export factor; mRN 100.0 6E-28 2.1E-32 220.7 24.6 239 103-350 63-349 (368)
121 1l0q_A Surface layer protein; 100.0 3.6E-26 1.2E-30 211.2 30.8 253 106-392 14-275 (391)
122 3bws_A Protein LP49; two-domai 100.0 2E-26 6.9E-31 215.9 27.3 241 119-391 164-431 (433)
123 2w18_A PALB2, fancn, partner a 100.0 2.4E-26 8.1E-31 201.9 25.2 251 126-389 41-354 (356)
124 3bws_A Protein LP49; two-domai 99.9 9.4E-26 3.2E-30 211.3 26.4 255 125-407 123-413 (433)
125 1l0q_A Surface layer protein; 99.9 5.9E-24 2E-28 196.3 30.8 223 104-355 54-283 (391)
126 3vu4_A KMHSV2; beta-propeller 99.9 1.9E-24 6.3E-29 197.2 25.1 216 125-350 59-339 (355)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 7E-24 2.4E-28 197.3 29.3 235 105-374 160-409 (415)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.7E-24 5.9E-29 201.4 21.2 253 119-405 112-408 (415)
129 2ojh_A Uncharacterized protein 99.9 1E-22 3.5E-27 179.9 22.8 237 117-380 34-289 (297)
130 1nir_A Nitrite reductase; hemo 99.9 7.5E-22 2.6E-26 189.4 30.1 280 106-407 161-491 (543)
131 1nir_A Nitrite reductase; hemo 99.9 2.1E-22 7.1E-27 193.2 25.6 249 131-407 144-433 (543)
132 2ecf_A Dipeptidyl peptidase IV 99.9 1.4E-22 4.7E-27 202.8 25.2 258 124-407 36-392 (741)
133 2oit_A Nucleoporin 214KDA; NH2 99.9 8.9E-23 3E-27 190.6 20.6 214 124-349 36-280 (434)
134 3vgz_A Uncharacterized protein 99.9 4.5E-21 1.5E-25 174.2 29.3 263 123-407 39-326 (353)
135 1ri6_A Putative isomerase YBHE 99.9 2.8E-21 9.4E-26 174.8 26.4 251 122-390 35-306 (343)
136 1xfd_A DIP, dipeptidyl aminope 99.9 4.9E-23 1.7E-27 205.5 15.7 230 126-379 18-322 (723)
137 1xfd_A DIP, dipeptidyl aminope 99.9 8.1E-22 2.8E-26 196.7 24.0 290 105-407 38-422 (723)
138 3u4y_A Uncharacterized protein 99.9 6.6E-21 2.3E-25 171.7 25.5 248 118-392 34-304 (331)
139 2ecf_A Dipeptidyl peptidase IV 99.9 1.7E-21 6E-26 194.9 20.5 264 126-407 110-437 (741)
140 2ojh_A Uncharacterized protein 99.9 8.3E-21 2.8E-25 167.6 21.4 236 142-407 18-284 (297)
141 3u4y_A Uncharacterized protein 99.9 1.2E-19 4.1E-24 163.5 29.1 232 131-392 4-252 (331)
142 3hfq_A Uncharacterized protein 99.9 5.1E-20 1.7E-24 167.2 25.5 260 122-390 37-315 (347)
143 2z3z_A Dipeptidyl aminopeptida 99.9 1.3E-20 4.3E-25 187.6 22.4 263 125-407 82-413 (706)
144 3vgz_A Uncharacterized protein 99.9 6.8E-20 2.3E-24 166.4 24.2 228 124-379 88-330 (353)
145 2oit_A Nucleoporin 214KDA; NH2 99.9 2.2E-20 7.6E-25 174.4 20.4 162 122-301 90-278 (434)
146 1k32_A Tricorn protease; prote 99.9 5.9E-20 2E-24 190.3 25.1 196 123-347 294-502 (1045)
147 1ri6_A Putative isomerase YBHE 99.9 4.9E-20 1.7E-24 166.5 21.5 248 138-407 7-289 (343)
148 3scy_A Hypothetical bacterial 99.9 7.5E-19 2.6E-23 160.3 29.2 258 123-390 48-335 (361)
149 3o4h_A Acylamino-acid-releasin 99.9 4.8E-20 1.6E-24 179.3 21.4 230 124-390 21-274 (582)
150 2z3z_A Dipeptidyl aminopeptida 99.8 5.9E-20 2E-24 182.8 22.2 249 117-392 113-435 (706)
151 1k32_A Tricorn protease; prote 99.8 1.5E-19 5E-24 187.4 23.2 251 107-390 227-500 (1045)
152 1pby_B Quinohemoprotein amine 99.8 4.5E-19 1.5E-23 159.7 22.2 202 126-354 35-317 (337)
153 1pby_B Quinohemoprotein amine 99.8 1.1E-18 3.7E-23 157.2 23.7 228 137-392 2-310 (337)
154 1jmx_B Amine dehydrogenase; ox 99.8 6.8E-19 2.3E-23 159.5 21.7 236 129-392 4-325 (349)
155 1z68_A Fibroblast activation p 99.8 4.1E-20 1.4E-24 184.3 14.5 241 126-389 61-388 (719)
156 3hfq_A Uncharacterized protein 99.8 6.8E-18 2.3E-22 153.1 26.6 211 121-346 82-316 (347)
157 1jmx_B Amine dehydrogenase; ox 99.8 1.1E-18 3.9E-23 158.0 21.1 204 126-354 44-332 (349)
158 1z68_A Fibroblast activation p 99.8 1.4E-19 4.7E-24 180.5 16.2 223 129-378 20-327 (719)
159 3pe7_A Oligogalacturonate lyas 99.8 1.6E-18 5.3E-23 159.7 21.4 248 119-391 25-328 (388)
160 1jof_A Carboxy-CIS,CIS-muconat 99.8 6.7E-18 2.3E-22 154.3 22.7 249 125-392 40-341 (365)
161 4a5s_A Dipeptidyl peptidase 4 99.8 5.6E-18 1.9E-22 169.2 22.6 229 125-378 17-334 (740)
162 3scy_A Hypothetical bacterial 99.8 2.7E-16 9.1E-21 143.4 27.6 210 123-346 98-336 (361)
163 1q7f_A NHL, brain tumor CG1071 99.8 2.4E-16 8.1E-21 138.9 26.2 244 121-391 26-279 (286)
164 3o4h_A Acylamino-acid-releasin 99.8 5.6E-18 1.9E-22 164.7 15.5 233 105-379 45-298 (582)
165 3fvz_A Peptidyl-glycine alpha- 99.8 4.9E-16 1.7E-20 139.8 25.7 252 124-390 23-320 (329)
166 4a5s_A Dipeptidyl peptidase 4 99.7 9E-17 3.1E-21 160.5 21.9 231 104-351 36-357 (740)
167 3azo_A Aminopeptidase; POP fam 99.7 5E-16 1.7E-20 153.3 22.6 220 106-348 49-326 (662)
168 3c5m_A Oligogalacturonate lyas 99.7 8.7E-17 3E-21 148.2 14.2 237 126-379 37-299 (396)
169 2oiz_A Aromatic amine dehydrog 99.7 1.7E-15 5.7E-20 138.0 22.1 231 129-375 54-360 (361)
170 2xdw_A Prolyl endopeptidase; a 99.7 1.1E-14 3.7E-19 144.9 29.1 244 122-391 122-413 (710)
171 3azo_A Aminopeptidase; POP fam 99.7 9.3E-16 3.2E-20 151.4 21.1 251 118-388 17-319 (662)
172 3e5z_A Putative gluconolactona 99.7 5.8E-15 2E-19 130.7 23.9 243 117-390 20-284 (296)
173 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.8E-15 6.3E-20 138.1 21.0 206 127-348 85-342 (365)
174 3pe7_A Oligogalacturonate lyas 99.7 1.5E-15 5.2E-20 139.6 19.6 232 119-379 75-367 (388)
175 1q7f_A NHL, brain tumor CG1071 99.7 3.5E-14 1.2E-18 124.9 27.0 202 122-349 74-282 (286)
176 2oiz_A Aromatic amine dehydrog 99.7 1.2E-14 4.2E-19 132.2 22.2 247 135-407 14-360 (361)
177 3fvz_A Peptidyl-glycine alpha- 99.7 2.5E-14 8.7E-19 128.5 23.2 213 123-348 89-323 (329)
178 2dg1_A DRP35, lactonase; beta 99.7 1.3E-13 4.4E-18 124.0 27.5 236 119-378 39-295 (333)
179 1rwi_B Serine/threonine-protei 99.6 5.7E-14 1.9E-18 122.3 23.6 238 126-392 25-264 (270)
180 2bkl_A Prolyl endopeptidase; m 99.6 2.3E-14 8E-19 142.0 21.4 244 122-391 118-396 (695)
181 2gop_A Trilobed protease; beta 99.6 4.9E-14 1.7E-18 127.5 21.7 219 125-389 59-328 (347)
182 3c5m_A Oligogalacturonate lyas 99.6 4.6E-15 1.6E-19 136.6 15.0 228 129-388 85-378 (396)
183 3no2_A Uncharacterized protein 99.6 1.7E-13 5.7E-18 119.7 23.7 216 135-378 4-228 (276)
184 3e5z_A Putative gluconolactona 99.6 1.7E-13 5.6E-18 121.2 23.9 205 117-349 61-288 (296)
185 2dg1_A DRP35, lactonase; beta 99.6 3E-14 1E-18 128.2 18.6 253 125-406 6-291 (333)
186 1qks_A Cytochrome CD1 nitrite 99.6 7.9E-13 2.7E-17 126.6 27.8 230 134-391 165-420 (567)
187 2gop_A Trilobed protease; beta 99.6 1.5E-13 5.1E-18 124.3 21.6 216 125-388 15-288 (347)
188 3dsm_A Uncharacterized protein 99.6 1.2E-12 3.9E-17 117.6 27.2 241 125-393 44-303 (328)
189 1qks_A Cytochrome CD1 nitrite 99.6 2.5E-12 8.7E-17 123.1 31.1 263 124-392 196-538 (567)
190 1rwi_B Serine/threonine-protei 99.6 6.6E-13 2.3E-17 115.5 22.9 202 124-350 66-267 (270)
191 2z2n_A Virginiamycin B lyase; 99.6 6E-12 2E-16 111.0 28.8 239 122-390 12-253 (299)
192 1yr2_A Prolyl oligopeptidase; 99.6 5E-13 1.7E-17 133.5 24.3 242 123-391 161-440 (741)
193 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 3.1E-12 1.1E-16 113.8 25.6 246 124-392 17-299 (314)
194 2z2n_A Virginiamycin B lyase; 99.5 1.2E-11 4.2E-16 108.9 28.7 236 123-389 55-292 (299)
195 3no2_A Uncharacterized protein 99.5 8.5E-12 2.9E-16 108.8 25.3 196 117-335 28-231 (276)
196 2xdw_A Prolyl endopeptidase; a 99.5 3.2E-12 1.1E-16 127.1 22.9 202 127-349 173-416 (710)
197 2qc5_A Streptogramin B lactona 99.5 7E-11 2.4E-15 104.1 28.7 237 124-390 19-258 (300)
198 3dsm_A Uncharacterized protein 99.5 4.6E-12 1.6E-16 113.7 21.1 204 124-354 83-308 (328)
199 1xip_A Nucleoporin NUP159; bet 99.5 1.2E-12 4.2E-17 118.4 16.7 175 126-335 39-232 (388)
200 3hrp_A Uncharacterized protein 99.5 1.4E-11 4.7E-16 113.9 24.1 202 125-349 131-356 (409)
201 2qc5_A Streptogramin B lactona 99.5 1.1E-10 3.9E-15 102.7 29.0 234 124-388 61-296 (300)
202 2bkl_A Prolyl endopeptidase; m 99.5 3.2E-12 1.1E-16 126.7 20.3 199 128-350 171-400 (695)
203 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 8.9E-11 3E-15 104.3 26.9 200 123-347 69-299 (314)
204 3iuj_A Prolyl endopeptidase; h 99.4 6.8E-12 2.3E-16 124.2 21.4 203 122-348 126-360 (693)
205 3g4e_A Regucalcin; six bladed 99.4 4.4E-11 1.5E-15 105.7 23.8 227 124-378 12-257 (297)
206 1xip_A Nucleoporin NUP159; bet 99.4 1E-12 3.5E-17 118.9 12.4 185 171-379 39-230 (388)
207 3g4e_A Regucalcin; six bladed 99.4 4E-10 1.4E-14 99.5 28.3 190 122-335 51-260 (297)
208 3dr2_A Exported gluconolactona 99.4 8.4E-11 2.9E-15 104.3 22.2 236 117-385 37-299 (305)
209 2mad_H Methylamine dehydrogena 99.4 6.6E-10 2.3E-14 101.2 26.2 236 132-392 28-350 (373)
210 2mad_H Methylamine dehydrogena 99.3 1.5E-09 5.2E-14 98.8 28.5 218 129-353 70-356 (373)
211 2ghs_A AGR_C_1268P; regucalcin 99.3 1.5E-09 5.2E-14 97.1 28.0 185 124-336 89-291 (326)
212 2ghs_A AGR_C_1268P; regucalcin 99.3 4E-10 1.4E-14 100.8 24.1 224 126-377 50-286 (326)
213 3sjl_D Methylamine dehydrogena 99.3 5.4E-10 1.8E-14 100.8 23.7 255 131-407 39-343 (386)
214 1yr2_A Prolyl oligopeptidase; 99.3 4.8E-11 1.7E-15 119.1 18.3 191 133-348 115-351 (741)
215 2qe8_A Uncharacterized protein 99.3 1.9E-10 6.6E-15 103.7 20.0 242 125-381 17-309 (343)
216 3dr2_A Exported gluconolactona 99.3 6.9E-10 2.4E-14 98.3 22.0 195 117-339 78-299 (305)
217 3sjl_D Methylamine dehydrogena 99.3 4.2E-10 1.4E-14 101.5 19.6 237 129-392 82-363 (386)
218 3hrp_A Uncharacterized protein 99.2 2.3E-09 7.7E-14 99.0 24.0 197 130-346 176-409 (409)
219 3c75_H MADH, methylamine dehyd 99.2 1.6E-09 5.6E-14 99.3 22.6 236 134-393 82-403 (426)
220 3c75_H MADH, methylamine dehyd 99.2 1.3E-09 4.4E-14 100.0 18.4 220 129-354 122-409 (426)
221 2hz6_A Endoplasmic reticulum t 99.2 7.6E-12 2.6E-16 114.1 3.4 189 135-354 8-199 (369)
222 2ece_A 462AA long hypothetical 99.2 5.9E-09 2E-13 94.7 21.3 234 131-381 88-399 (462)
223 2qe8_A Uncharacterized protein 99.1 1E-08 3.6E-13 92.3 22.2 217 122-343 64-317 (343)
224 2iwa_A Glutamine cyclotransfer 99.1 3.3E-08 1.1E-12 84.4 23.9 195 127-349 23-239 (266)
225 1mda_H Methylamine dehydrogena 99.1 4.9E-09 1.7E-13 94.6 16.7 213 129-355 69-354 (368)
226 3iuj_A Prolyl endopeptidase; h 99.1 1.2E-08 4.2E-13 100.8 21.0 195 128-349 178-407 (693)
227 3nol_A Glutamine cyclotransfer 99.0 8.6E-08 2.9E-12 80.9 20.8 180 127-336 45-244 (262)
228 1npe_A Nidogen, entactin; glyc 99.0 5.5E-07 1.9E-11 77.8 25.7 204 125-354 36-245 (267)
229 1fwx_A Nitrous oxide reductase 99.0 1.4E-08 4.6E-13 95.6 16.2 226 134-381 99-406 (595)
230 1mda_H Methylamine dehydrogena 98.9 3.9E-08 1.3E-12 88.7 17.6 229 138-392 34-346 (368)
231 3qqz_A Putative uncharacterize 98.9 2.9E-06 1E-10 71.9 27.0 210 119-344 21-250 (255)
232 2ece_A 462AA long hypothetical 98.9 2.9E-07 9.9E-12 83.7 21.1 193 126-335 139-399 (462)
233 3mbr_X Glutamine cyclotransfer 98.9 1.5E-06 5E-11 72.7 23.5 183 125-336 21-223 (243)
234 2hz6_A Endoplasmic reticulum t 98.9 2.6E-10 8.9E-15 103.9 0.9 178 180-391 8-191 (369)
235 3nok_A Glutaminyl cyclase; bet 98.9 2.4E-07 8.1E-12 78.2 18.3 179 127-336 57-254 (268)
236 3hxj_A Pyrrolo-quinoline quino 98.8 3E-07 1E-11 81.9 19.0 217 136-391 107-323 (330)
237 1kb0_A Quinohemoprotein alcoho 98.8 2.1E-07 7E-12 91.5 18.7 215 137-364 175-524 (677)
238 1fwx_A Nitrous oxide reductase 98.8 3E-07 1E-11 86.6 18.2 213 125-348 134-432 (595)
239 2fp8_A Strictosidine synthase; 98.8 3.1E-06 1E-10 75.3 23.7 202 126-346 20-268 (322)
240 2iwa_A Glutamine cyclotransfer 98.8 4E-07 1.4E-11 77.7 16.7 183 172-379 23-222 (266)
241 3nol_A Glutamine cyclotransfer 98.8 3.1E-07 1.1E-11 77.5 15.6 185 171-382 44-244 (262)
242 1yiq_A Quinohemoprotein alcoho 98.8 1.6E-06 5.4E-11 85.4 23.3 215 145-375 182-530 (689)
243 2xe4_A Oligopeptidase B; hydro 98.8 1.2E-06 4.3E-11 87.2 22.7 196 126-345 175-398 (751)
244 1kb0_A Quinohemoprotein alcoho 98.8 6.5E-07 2.2E-11 87.9 20.3 215 128-349 246-569 (677)
245 1yiq_A Quinohemoprotein alcoho 98.7 7.9E-07 2.7E-11 87.5 19.0 196 129-332 239-533 (689)
246 2p4o_A Hypothetical protein; p 98.7 2.1E-05 7.3E-10 69.2 25.5 224 125-378 32-273 (306)
247 3q7m_A Lipoprotein YFGL, BAMB; 98.6 8.3E-06 2.8E-10 74.1 23.0 199 136-354 143-344 (376)
248 3nok_A Glutaminyl cyclase; bet 98.6 2E-06 6.7E-11 72.6 16.5 181 172-379 57-251 (268)
249 2fp8_A Strictosidine synthase; 98.6 1.1E-05 3.8E-10 71.7 22.7 197 125-348 80-314 (322)
250 1npe_A Nidogen, entactin; glyc 98.6 1.5E-05 5.2E-10 68.6 22.2 191 136-348 1-199 (267)
251 3q7m_A Lipoprotein YFGL, BAMB; 98.6 4.2E-05 1.4E-09 69.4 26.2 225 135-392 102-337 (376)
252 3hxj_A Pyrrolo-quinoline quino 98.6 5.6E-07 1.9E-11 80.1 13.3 218 129-389 24-241 (330)
253 1k3i_A Galactose oxidase precu 98.5 5E-06 1.7E-10 81.6 19.5 117 129-260 190-325 (656)
254 3mbr_X Glutamine cyclotransfer 98.5 9.9E-06 3.4E-10 67.7 17.9 182 170-377 21-218 (243)
255 3v65_B Low-density lipoprotein 98.5 9.1E-05 3.1E-09 67.5 26.0 207 124-354 115-325 (386)
256 4a2l_A BT_4663, two-component 98.5 0.00013 4.4E-09 73.3 29.2 246 124-390 214-478 (795)
257 3v64_C Agrin; beta propeller, 98.5 0.00013 4.4E-09 65.5 26.0 206 125-354 73-282 (349)
258 4a2l_A BT_4663, two-component 98.5 0.00015 5.2E-09 72.8 28.0 242 124-389 309-568 (795)
259 1kv9_A Type II quinohemoprotei 98.4 3.4E-05 1.2E-09 75.7 21.1 200 145-357 177-498 (668)
260 1ijq_A LDL receptor, low-densi 98.4 0.00095 3.2E-08 58.9 28.7 206 124-354 29-245 (316)
261 3qqz_A Putative uncharacterize 98.4 0.00012 4.1E-09 62.0 21.2 206 167-391 24-252 (255)
262 3p5b_L Low density lipoprotein 98.4 0.00046 1.6E-08 63.1 26.5 209 122-354 109-327 (400)
263 3v64_C Agrin; beta propeller, 98.4 0.00064 2.2E-08 60.9 26.9 195 126-347 35-234 (349)
264 2p4o_A Hypothetical protein; p 98.3 0.00057 2E-08 60.0 25.8 197 124-337 71-278 (306)
265 3v9f_A Two-component system se 98.3 0.00025 8.5E-09 71.1 26.1 238 124-389 362-608 (781)
266 1ijq_A LDL receptor, low-densi 98.3 0.00088 3E-08 59.1 26.4 184 138-347 3-195 (316)
267 3sov_A LRP-6, low-density lipo 98.3 0.00045 1.5E-08 61.0 24.3 205 126-354 36-245 (318)
268 2p9w_A MAL S 1 allergenic prot 98.3 0.00049 1.7E-08 60.0 23.0 212 128-348 16-266 (334)
269 3v65_B Low-density lipoprotein 98.3 0.00065 2.2E-08 61.8 25.0 193 128-347 80-277 (386)
270 3v9f_A Two-component system se 98.2 0.00051 1.7E-08 68.8 26.0 241 124-389 312-565 (781)
271 2ad6_A Methanol dehydrogenase 98.2 0.00015 5E-09 69.7 20.5 208 137-357 161-504 (571)
272 1kv9_A Type II quinohemoprotei 98.2 8.5E-05 2.9E-09 72.9 18.9 200 128-335 233-520 (668)
273 2xe4_A Oligopeptidase B; hydro 98.2 7.9E-05 2.7E-09 74.2 19.0 156 171-347 175-354 (751)
274 3p5b_L Low density lipoprotein 98.2 0.0018 6.2E-08 59.2 25.8 186 137-348 84-278 (400)
275 3tc9_A Hypothetical hydrolase; 98.2 0.00036 1.2E-08 64.5 21.2 154 126-300 138-300 (430)
276 2xbg_A YCF48-like protein; pho 98.2 0.0014 4.7E-08 58.2 24.3 235 124-390 79-320 (327)
277 3m0c_C LDL receptor, low-densi 98.2 0.0019 6.5E-08 64.2 27.4 209 123-354 422-639 (791)
278 3amr_A 3-phytase; beta-propell 98.1 0.0014 4.9E-08 57.7 23.0 202 134-354 38-271 (355)
279 3a9g_A Putative uncharacterize 98.1 0.00098 3.3E-08 59.8 22.7 244 125-380 29-329 (354)
280 4hw6_A Hypothetical protein, I 98.1 0.00099 3.4E-08 61.6 23.2 200 123-346 180-432 (433)
281 1flg_A Protein (quinoprotein e 98.1 0.00041 1.4E-08 66.7 21.2 195 129-332 250-544 (582)
282 4hw6_A Hypothetical protein, I 98.1 0.00077 2.6E-08 62.3 21.9 198 126-345 140-372 (433)
283 3tc9_A Hypothetical hydrolase; 98.1 0.00018 6.3E-09 66.5 17.3 153 172-347 139-301 (430)
284 3sov_A LRP-6, low-density lipo 98.1 0.0015 5E-08 57.7 22.4 187 138-347 6-197 (318)
285 1flg_A Protein (quinoprotein e 98.0 0.00082 2.8E-08 64.6 21.8 156 191-358 291-527 (582)
286 2xbg_A YCF48-like protein; pho 98.0 0.0061 2.1E-07 54.0 27.5 235 125-385 36-272 (327)
287 2p9w_A MAL S 1 allergenic prot 98.0 0.00055 1.9E-08 59.8 18.4 161 172-347 15-215 (334)
288 2ism_A Putative oxidoreductase 98.0 0.00081 2.8E-08 60.3 19.8 241 126-379 32-331 (352)
289 2ad6_A Methanol dehydrogenase 98.0 0.00058 2E-08 65.6 18.9 196 129-333 239-523 (571)
290 1w6s_A Methanol dehydrogenase 97.9 0.00084 2.9E-08 64.6 19.7 208 145-365 181-521 (599)
291 3kya_A Putative phosphatase; s 97.9 0.0038 1.3E-07 58.1 22.1 204 126-345 140-408 (496)
292 1n7d_A LDL receptor, low-densi 97.9 0.00018 6.3E-09 70.7 13.9 206 125-354 406-621 (699)
293 1k3i_A Galactose oxidase precu 97.9 0.00066 2.3E-08 66.5 17.9 207 125-336 243-530 (656)
294 3s94_A LRP-6, low-density lipo 97.8 0.0064 2.2E-07 58.8 23.6 205 124-352 39-248 (619)
295 3m0c_C LDL receptor, low-densi 97.8 0.0084 2.9E-07 59.6 24.6 185 138-348 397-590 (791)
296 1n7d_A LDL receptor, low-densi 97.7 0.0003 1E-08 69.2 12.3 178 145-347 385-571 (699)
297 1w6s_A Methanol dehydrogenase 97.7 0.0031 1.1E-07 60.6 18.6 200 136-354 62-349 (599)
298 4a0p_A LRP6, LRP-6, low-densit 97.6 0.028 9.5E-07 54.5 25.2 201 125-351 37-241 (628)
299 3sre_A PON1, serum paraoxonase 97.6 0.013 4.5E-07 52.1 20.1 201 126-346 51-297 (355)
300 4a0p_A LRP6, LRP-6, low-densit 97.5 0.06 2E-06 52.1 25.1 188 137-348 7-198 (628)
301 2g8s_A Glucose/sorbosone dehyd 97.4 0.033 1.1E-06 49.7 21.4 244 126-379 19-339 (353)
302 2xzh_A Clathrin heavy chain 1; 97.4 0.049 1.7E-06 47.3 23.7 206 129-354 71-297 (365)
303 3amr_A 3-phytase; beta-propell 97.4 0.024 8.1E-07 50.0 19.3 188 181-391 40-262 (355)
304 3kya_A Putative phosphatase; s 97.4 0.01 3.5E-07 55.2 17.6 160 172-346 141-340 (496)
305 3pbp_A Nucleoporin NUP82; beta 97.4 0.022 7.4E-07 51.4 18.5 160 133-297 29-208 (452)
306 3das_A Putative oxidoreductase 97.4 0.07 2.4E-06 47.2 22.5 246 125-379 32-324 (347)
307 2vpj_A Kelch-like protein 12; 97.3 0.0089 3.1E-07 52.0 16.1 188 135-348 62-279 (301)
308 3ii7_A Kelch-like protein 7; p 97.3 0.012 4E-07 51.4 16.9 188 135-348 55-273 (306)
309 2xn4_A Kelch-like protein 2; s 97.3 0.01 3.4E-07 51.7 16.4 188 135-348 61-277 (302)
310 4asc_A Kelch repeat and BTB do 97.2 0.032 1.1E-06 48.8 18.2 192 131-348 41-278 (315)
311 3s94_A LRP-6, low-density lipo 97.2 0.14 4.9E-06 49.4 24.0 199 125-348 349-552 (619)
312 2vpj_A Kelch-like protein 12; 97.1 0.028 9.4E-07 48.8 16.9 188 135-348 14-232 (301)
313 1bpo_A Protein (clathrin); cla 97.1 0.15 5.3E-06 46.1 23.8 205 129-354 70-296 (494)
314 1zgk_A Kelch-like ECH-associat 96.9 0.026 8.8E-07 49.3 14.7 188 135-348 70-288 (308)
315 2woz_A Kelch repeat and BTB do 96.9 0.079 2.7E-06 46.4 17.9 191 131-347 52-287 (318)
316 2xn4_A Kelch-like protein 2; s 96.9 0.047 1.6E-06 47.4 16.0 187 136-348 16-230 (302)
317 3ii7_A Kelch-like protein 7; p 96.9 0.057 1.9E-06 46.9 16.5 186 137-348 13-226 (306)
318 1tl2_A L10, protein (tachylect 96.9 0.095 3.2E-06 42.7 16.0 157 171-347 42-208 (236)
319 3pbp_A Nucleoporin NUP82; beta 96.8 0.025 8.7E-07 50.9 13.9 122 126-254 67-208 (452)
320 2ism_A Putative oxidoreductase 96.8 0.2 6.8E-06 44.6 19.4 201 124-335 74-333 (352)
321 4asc_A Kelch repeat and BTB do 96.8 0.078 2.7E-06 46.3 16.6 183 139-348 8-222 (315)
322 3a9g_A Putative uncharacterize 96.7 0.31 1.1E-05 43.4 21.8 200 124-335 72-330 (354)
323 1tl2_A L10, protein (tachylect 96.7 0.045 1.5E-06 44.6 13.0 152 229-392 42-208 (236)
324 3ei3_A DNA damage-binding prot 96.6 0.24 8.4E-06 51.4 21.4 101 239-347 844-955 (1158)
325 1zgk_A Kelch-like ECH-associat 96.6 0.071 2.4E-06 46.4 15.3 188 135-348 24-241 (308)
326 3sre_A PON1, serum paraoxonase 96.5 0.44 1.5E-05 42.3 19.5 170 189-378 81-282 (355)
327 2uvk_A YJHT; unknown function, 96.4 0.07 2.4E-06 47.5 14.4 197 135-354 65-349 (357)
328 2be1_A Serine/threonine-protei 96.4 0.014 4.7E-07 51.6 9.1 195 137-352 11-236 (339)
329 2zwa_A Leucine carboxyl methyl 96.4 0.26 8.8E-06 48.4 18.9 199 134-348 396-636 (695)
330 1cru_A Protein (soluble quinop 96.3 0.39 1.3E-05 44.4 18.5 110 172-290 29-163 (454)
331 1xi4_A Clathrin heavy chain; a 96.2 0.26 9E-06 51.4 18.3 205 130-354 71-296 (1630)
332 3das_A Putative oxidoreductase 96.1 0.52 1.8E-05 41.7 17.6 150 172-334 34-219 (347)
333 1cru_A Protein (soluble quinop 96.1 0.45 1.5E-05 44.0 18.0 111 126-246 28-162 (454)
334 2woz_A Kelch repeat and BTB do 96.1 0.24 8.2E-06 43.2 15.5 177 147-348 25-232 (318)
335 2g8s_A Glucose/sorbosone dehyd 95.9 0.3 1E-05 43.5 15.4 107 172-290 20-149 (353)
336 3s25_A Hypothetical 7-bladed b 95.7 0.47 1.6E-05 41.1 15.5 176 129-347 57-255 (302)
337 2uvk_A YJHT; unknown function, 95.7 0.16 5.4E-06 45.2 13.0 71 135-207 19-102 (357)
338 3s25_A Hypothetical 7-bladed b 95.4 0.87 3E-05 39.4 16.2 174 132-348 21-217 (302)
339 2zwa_A Leucine carboxyl methyl 94.9 1.1 3.8E-05 43.9 16.8 151 135-300 451-634 (695)
340 3ott_A Two-component system se 94.6 3.9 0.00013 40.4 27.0 227 124-381 62-297 (758)
341 2xzh_A Clathrin heavy chain 1; 94.4 2.3 7.9E-05 37.0 25.8 205 124-352 106-337 (365)
342 3ei3_A DNA damage-binding prot 94.4 5.7 0.0002 41.4 26.2 76 123-199 552-635 (1158)
343 1bpo_A Protein (clathrin); cla 93.7 4 0.00014 37.1 26.7 206 124-353 105-337 (494)
344 1xi4_A Clathrin heavy chain; a 93.6 1.9 6.5E-05 45.3 15.5 172 145-348 47-236 (1630)
345 3qhy_B Beta-lactamase inhibito 93.3 3.4 0.00012 35.2 16.6 186 126-350 64-249 (282)
346 3ott_A Two-component system se 91.0 13 0.00044 36.7 28.2 238 126-389 192-445 (758)
347 2be1_A Serine/threonine-protei 87.8 1.9 6.5E-05 37.9 8.2 113 240-356 11-139 (339)
348 2wg3_C Hedgehog-interacting pr 87.8 17 0.00057 33.5 23.9 55 126-180 15-79 (463)
349 3sbq_A Nitrous-oxide reductase 87.7 5.4 0.00018 37.5 11.2 114 172-289 325-453 (638)
350 3q6k_A 43.2 kDa salivary prote 86.9 16 0.00056 32.5 20.8 207 125-335 87-342 (381)
351 2wg3_C Hedgehog-interacting pr 86.2 9.9 0.00034 35.0 12.4 110 229-338 15-160 (463)
352 1suu_A DNA gyrase subunit A; t 84.7 19 0.00064 31.1 23.8 205 134-348 6-232 (312)
353 4gq2_M Nucleoporin NUP120; bet 83.9 21 0.00072 36.3 14.6 74 227-300 235-316 (950)
354 3qhy_B Beta-lactamase inhibito 83.7 19 0.00066 30.5 19.0 187 126-351 25-211 (282)
355 4gq2_M Nucleoporin NUP120; bet 81.3 33 0.0011 34.9 14.9 39 171-209 237-275 (950)
356 3b7f_A Glycosyl hydrolase, BNR 79.9 32 0.0011 30.5 21.7 109 229-343 116-258 (394)
357 3uc1_A DNA gyrase subunit A; D 79.8 30 0.001 30.1 21.4 168 125-300 95-278 (327)
358 1wp5_A Topoisomerase IV; broke 79.3 31 0.001 29.9 21.1 205 134-348 3-226 (323)
359 3sbq_A Nitrous-oxide reductase 77.5 49 0.0017 31.3 20.5 77 270-348 323-409 (638)
360 3uc1_A DNA gyrase subunit A; D 75.1 41 0.0014 29.2 24.7 211 127-350 44-282 (327)
361 3b7f_A Glycosyl hydrolase, BNR 70.0 58 0.002 28.8 23.9 166 124-292 54-254 (394)
362 3f7f_A Nucleoporin NUP120; nuc 68.6 37 0.0013 33.0 10.6 37 229-267 223-259 (729)
363 3f7f_A Nucleoporin NUP120; nuc 67.6 11 0.00037 36.6 6.8 35 318-354 223-257 (729)
364 4hvt_A Ritya.17583.B, post-pro 61.2 1.3E+02 0.0043 29.5 19.5 205 126-348 130-382 (711)
365 3zwu_A Alkaline phosphatase PH 58.8 46 0.0016 31.6 9.2 60 126-187 477-548 (592)
366 3no0_A DNA gyrase subunit A; D 53.3 1E+02 0.0034 25.9 23.1 208 124-349 23-248 (276)
367 4fhn_B Nucleoporin NUP120; pro 52.2 30 0.001 36.0 7.5 38 172-209 240-277 (1139)
368 4a9v_A PHOX; hydrolase, beta-p 51.8 1E+02 0.0035 29.1 10.1 62 125-188 476-549 (592)
369 3kci_A Probable E3 ubiquitin-p 49.5 1.4E+02 0.0047 26.4 24.8 215 126-351 106-349 (389)
370 4fhn_B Nucleoporin NUP120; pro 48.3 19 0.00064 37.6 5.2 39 228-266 238-276 (1139)
371 1zi0_A DNA gyrase subunit A; b 46.8 1.4E+02 0.0046 25.5 26.2 205 134-348 1-227 (307)
372 3zwu_A Alkaline phosphatase PH 45.9 84 0.0029 29.8 8.8 58 272-334 478-548 (592)
373 4a9v_A PHOX; hydrolase, beta-p 43.1 1.3E+02 0.0043 28.5 9.3 60 271-335 477-549 (592)
374 3q6k_A 43.2 kDa salivary prote 41.8 1.9E+02 0.0064 25.7 18.7 145 191-347 123-306 (381)
375 1olz_A Semaphorin 4D; developm 38.1 2.3E+02 0.008 27.3 10.7 72 124-195 396-477 (663)
376 3kci_A Probable E3 ubiquitin-p 32.4 2.6E+02 0.0088 24.5 24.0 204 136-348 62-294 (389)
377 3l6v_A GYRA, DNA gyrase subuni 30.7 2.8E+02 0.0095 24.4 26.2 251 134-401 5-313 (370)
378 3al9_A Plexin-A2; beta-propell 28.3 98 0.0033 29.0 6.1 71 125-195 400-476 (539)
379 1zi0_A DNA gyrase subunit A; b 28.1 2.8E+02 0.0095 23.5 26.1 207 129-348 46-278 (307)
380 3no0_A DNA gyrase subunit A; D 28.0 2.6E+02 0.009 23.2 20.3 166 124-300 67-245 (276)
381 1sqj_A OXG-RCBH, oligoxylogluc 27.3 4.6E+02 0.016 25.8 20.9 159 124-291 14-190 (789)
382 1zvt_A Topoisomerase IV subuni 23.3 3.1E+02 0.011 22.5 14.1 106 241-348 4-115 (256)
383 2cn3_A Xyloglucanase, beta-1,4 22.1 5.5E+02 0.019 24.9 16.9 110 171-290 24-152 (737)
384 1suu_A DNA gyrase subunit A; t 21.7 3.7E+02 0.013 22.8 24.9 208 127-347 49-283 (312)
385 1q47_A Semaphorin 3A; beta pro 21.6 2.7E+02 0.0093 25.7 7.7 59 284-342 423-487 (495)
386 1wp5_A Topoisomerase IV; broke 20.1 4.1E+02 0.014 22.7 26.6 211 127-348 41-278 (323)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.6e-40 Score=306.53 Aligned_cols=261 Identities=20% Similarity=0.284 Sum_probs=230.5
Q ss_pred ccccceeeeeccCCCCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCC
Q 015438 102 ADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQ 181 (407)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 181 (407)
.+....+|+....+....+.+|...|.+++|+|++++|++|+.|+.|+|||+.++..+. ...+|...|.+++|+|++
T Consensus 128 ~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~---~~~~h~~~V~~v~~~p~~ 204 (410)
T 1vyh_C 128 EDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIR---TMHGHDHNVSSVSIMPNG 204 (410)
T ss_dssp SSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEE---CCCCCSSCEEEEEECSSS
T ss_pred CCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE---EEcCCCCCEEEEEEeCCC
Confidence 45567788887778888899999999999999999999999999999999998875543 356788899999999999
Q ss_pred CeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCee
Q 015438 182 RHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL 261 (407)
Q Consensus 182 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~ 261 (407)
++|++|+.|+.|++||+.++.....+. +|...|.++.|+|++.+|++|+.|+.|++||+.++++
T Consensus 205 ~~l~s~s~D~~i~~wd~~~~~~~~~~~----------------~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~ 268 (410)
T 1vyh_C 205 DHIVSASRDKTIKMWEVQTGYCVKTFT----------------GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC 268 (410)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEE----------------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEe----------------CCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCce
Confidence 999999999999999999887644322 4667899999999999999999999999999999999
Q ss_pred eeeeeccCCCeEEEEecCCC-------------------CCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEE
Q 015438 262 SLRILAHTSDVNTVCFGDES-------------------GHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFI 322 (407)
Q Consensus 262 ~~~~~~~~~~v~~i~~s~~~-------------------~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~ 322 (407)
...+..|...|.+++|+|.. +.+|++|+.|+.|++||++ .+.++..+.+|...|+++
T Consensus 269 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~----~~~~~~~~~~h~~~v~~v 344 (410)
T 1vyh_C 269 KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS----TGMCLMTLVGHDNWVRGV 344 (410)
T ss_dssp EEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETT----TTEEEEEEECCSSCEEEE
T ss_pred eeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECC----CCceEEEEECCCCcEEEE
Confidence 99999999999999998532 6799999999999999998 888999999999999999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCC-CCCcceEEEe
Q 015438 323 DSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKH-PCDQSVATYK 389 (407)
Q Consensus 323 ~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~v~~~~ 389 (407)
+|+|+|++|++|+.||+|++||+++++....+ ..+...|..++|+|++.+|++ +.|+.|++|+
T Consensus 345 ~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~----~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 345 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTL----NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408 (410)
T ss_dssp EECSSSSCEEEEETTTEEEEECCTTSCCCEEE----ECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCceEEEE----cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 99999999999999999999999988776553 345667899999999976654 5789999996
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=7.8e-40 Score=292.68 Aligned_cols=264 Identities=16% Similarity=0.222 Sum_probs=220.7
Q ss_pred CCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEE
Q 015438 116 GPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHI 195 (407)
Q Consensus 116 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~v 195 (407)
....+.+|.+.|.+++|+|++++|++|+.||.|++||+.++..+.. ...|..+|.+++|+|++++|++|+.|+.|++
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~v 81 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRS---IQVTETPVRAGKFIARKNWIIVGSDDFRIRV 81 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEE---EECCSSCEEEEEEEGGGTEEEEEETTSEEEE
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEE---eeccCCcEEEEEEeCCCCEEEEECCCCEEEE
Confidence 3456789999999999999999999999999999999999865543 3456678999999999999999999999999
Q ss_pred EECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCC-eeeeeeeccCCCeEE
Q 015438 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN-KLSLRILAHTSDVNT 274 (407)
Q Consensus 196 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~ 274 (407)
||+.+++....+. +|...|.+++|+|++++|++|+.|++|++||++++ .....+.+|...|.+
T Consensus 82 wd~~~~~~~~~~~----------------~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~ 145 (304)
T 2ynn_A 82 FNYNTGEKVVDFE----------------AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMC 145 (304)
T ss_dssp EETTTCCEEEEEE----------------CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEE
T ss_pred EECCCCcEEEEEe----------------CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEE
Confidence 9999887644322 47778999999999999999999999999999887 455678899999999
Q ss_pred EEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeee-ccccCCeEEEEecC--CCCEEEEEeCCCcEEEEECCCCCCc
Q 015438 275 VCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVL-MGHLEGITFIDSRG--DGRYLISNGKDQAIKLWDIRKMSSN 351 (407)
Q Consensus 275 i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-~~~~~~i~~~~~s~--~~~~l~s~~~dg~i~iwd~~~~~~~ 351 (407)
++|+|.++.+|++|+.|+.|++||++ ...+...+ .+|...+..++|+| ++.+|++|+.|++|++||+++++.+
T Consensus 146 v~~~p~~~~~l~sgs~D~~v~iwd~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~ 221 (304)
T 2ynn_A 146 VAFNPKDPSTFASGCLDRTVKVWSLG----QSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV 221 (304)
T ss_dssp EEECTTCTTEEEEEETTSEEEEEETT----CSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEE
T ss_pred EEECCCCCCEEEEEeCCCeEEEEECC----CCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccc
Confidence 99996688999999999999999997 55554444 35667899999986 7789999999999999999998766
Q ss_pred ccccCCCccccccceeeeCCCCCCccCC-CCCcceEEEeCCcc---------ceeeEEEeeCCCC
Q 015438 352 ASCNLGFRSYEWDYRWMDYPPQARDLKH-PCDQSVATYKGHSV---------LRTLIRCHFSPVY 406 (407)
Q Consensus 352 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~v~~~~gh~~---------~~~~~~~~fsp~~ 406 (407)
..+ ..+...+..+.|+|++.+|++ +.|+.|++|+..+. ...+..+.|+|+.
T Consensus 222 ~~~----~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (304)
T 2ynn_A 222 ATL----EGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTG 282 (304)
T ss_dssp EEE----ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTC
T ss_pred eee----CCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCC
Confidence 543 445667889999999876654 56899999985431 1245677888875
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.4e-39 Score=295.83 Aligned_cols=266 Identities=17% Similarity=0.235 Sum_probs=224.5
Q ss_pred CcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEE
Q 015438 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (407)
Q Consensus 117 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vw 196 (407)
...+.+|.+.|++++|+|++++|++|+.||.|+|||+.++..+.. ...|...|.+++|+|++++|++++.|+.|++|
T Consensus 48 ~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw 124 (340)
T 1got_B 48 RRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHA---IPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEE---EECSSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred heeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceE---eecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 346789999999999999999999999999999999998865544 34566689999999999999999999999999
Q ss_pred ECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEE
Q 015438 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVC 276 (407)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~ 276 (407)
++.+........ ....+|...|.++.|++++. +++++.|+.|++||+++++.+..+.+|.+.|.+++
T Consensus 125 ~~~~~~~~~~~~------------~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~ 191 (340)
T 1got_B 125 NLKTREGNVRVS------------RELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLS 191 (340)
T ss_dssp ETTTCSBSCEEE------------EEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred ECccCCCcceeE------------EEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEE
Confidence 998754211100 00124777899999998875 88999999999999999999999999999999999
Q ss_pred ecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccC
Q 015438 277 FGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNL 356 (407)
Q Consensus 277 ~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 356 (407)
|+ +++++|++|+.|+.|++||++ .+.++..+.+|...|++++|+|++++|++|+.||+|++||+++.+.+..+.
T Consensus 192 ~~-~~~~~l~sg~~d~~v~~wd~~----~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~- 265 (340)
T 1got_B 192 LA-PDTRLFVSGACDASAKLWDVR----EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS- 265 (340)
T ss_dssp EC-TTSSEEEEEETTSCEEEEETT----TCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-
T ss_pred EC-CCCCEEEEEeCCCcEEEEECC----CCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEc-
Confidence 98 788999999999999999998 888899999999999999999999999999999999999999876654432
Q ss_pred CCccccccceeeeCCCCCCccCCC-CCcceEEEe-----------CCccceeeEEEeeCCCCC
Q 015438 357 GFRSYEWDYRWMDYPPQARDLKHP-CDQSVATYK-----------GHSVLRTLIRCHFSPVYR 407 (407)
Q Consensus 357 ~~~~~~~~v~~~~~~~~~~~l~~~-~~~~v~~~~-----------gh~~~~~~~~~~fsp~~~ 407 (407)
.......+..+.|+|++++|+++ .|+.|++|+ ||.. .+..+.|+|+.+
T Consensus 266 -~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~--~v~~~~~s~dg~ 325 (340)
T 1got_B 266 -HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDN--RVSCLGVTDDGM 325 (340)
T ss_dssp -CTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSS--CEEEEEECTTSS
T ss_pred -cCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCC--cEEEEEEcCCCC
Confidence 22334568899999999888765 566777775 5654 678899999864
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=9.8e-40 Score=304.29 Aligned_cols=261 Identities=18% Similarity=0.221 Sum_probs=227.9
Q ss_pred CcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEE
Q 015438 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (407)
Q Consensus 117 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vw 196 (407)
...+.+|.++|++++|+|++++|++|+.||.|+|||+.++.... ...+|...|.+++|+|++++|++|+.|+.|++|
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~---~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iw 177 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER---TLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCE---EECCCSSCEEEEEECTTSSEEEEEETTSCCCEE
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE---EEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 45678999999999999999999999999999999999885443 345688889999999999999999999999999
Q ss_pred ECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEE
Q 015438 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVC 276 (407)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~ 276 (407)
|+.+++....+ .+|...|.+++|+|++++|++|+.|++|++||+++++++..+.+|...|.++.
T Consensus 178 d~~~~~~~~~~----------------~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~ 241 (410)
T 1vyh_C 178 DFQGFECIRTM----------------HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241 (410)
T ss_dssp ETTSSCEEECC----------------CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred eCCCCceeEEE----------------cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEE
Confidence 99877654332 25777899999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCC--------------------CCEEEEEeC
Q 015438 277 FGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGD--------------------GRYLISNGK 336 (407)
Q Consensus 277 ~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~--------------------~~~l~s~~~ 336 (407)
++ +++.+|++|+.|+.|++||++ .+.+...+.+|...|.+++|+|+ +.+|++|+.
T Consensus 242 ~~-~~g~~l~s~s~D~~v~vwd~~----~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~ 316 (410)
T 1vyh_C 242 PN-QDGTLIASCSNDQTVRVWVVA----TKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSR 316 (410)
T ss_dssp EC-TTSSEEEEEETTSCEEEEETT----TCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEET
T ss_pred EC-CCCCEEEEEcCCCeEEEEECC----CCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeC
Confidence 98 889999999999999999998 78888899999999999999996 678999999
Q ss_pred CCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCC-CCCcceEEEe-----------CCccceeeEEEeeCC
Q 015438 337 DQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKH-PCDQSVATYK-----------GHSVLRTLIRCHFSP 404 (407)
Q Consensus 337 dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~v~~~~-----------gh~~~~~~~~~~fsp 404 (407)
|+.|++||+++++.+..+ ..+...+..+.|+|++++|++ +.|+.|++|+ +|.. .+..+.|+|
T Consensus 317 D~~i~iwd~~~~~~~~~~----~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~--~v~~l~~~~ 390 (410)
T 1vyh_C 317 DKTIKMWDVSTGMCLMTL----VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHK 390 (410)
T ss_dssp TSEEEEEETTTTEEEEEE----ECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSS--CEEEEEECS
T ss_pred CCeEEEEECCCCceEEEE----ECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCC--cEEEEEEcC
Confidence 999999999998766543 345567889999999977754 4677787776 4543 688899999
Q ss_pred CCC
Q 015438 405 VYR 407 (407)
Q Consensus 405 ~~~ 407 (407)
+.+
T Consensus 391 ~~~ 393 (410)
T 1vyh_C 391 TAP 393 (410)
T ss_dssp SSS
T ss_pred CCC
Confidence 863
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.3e-39 Score=294.80 Aligned_cols=270 Identities=16% Similarity=0.197 Sum_probs=225.0
Q ss_pred CcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEE
Q 015438 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (407)
Q Consensus 117 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vw 196 (407)
...+.+|.+.|++++|+|++++|++|+.||.|+|||..++...... ..|...|.+++|+|++.+|++++.|+.+++|
T Consensus 57 ~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~---~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~ 133 (354)
T 2pbi_B 57 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAV---TMPCTWVMACAYAPSGCAIACGGLDNKCSVY 133 (354)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE---ECSSSCCCEEEECTTSSEEEEESTTSEEEEE
T ss_pred EEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEE---ecCCCCEEEEEECCCCCEEEEeeCCCCEEEE
Confidence 4567899999999999999999999999999999999887655443 3355579999999999999999999999999
Q ss_pred ECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEE
Q 015438 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVC 276 (407)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~ 276 (407)
++............. . ..+|...|.+++|+|++..|++++.|++|++||+++++.+..+.+|...|.+++
T Consensus 134 ~~~~~~~~~~~~~~~-----~-----~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~ 203 (354)
T 2pbi_B 134 PLTFDKNENMAAKKK-----S-----VAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLD 203 (354)
T ss_dssp ECCCCTTCCSGGGCE-----E-----EEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred EEeccccccccccce-----e-----eeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEE
Confidence 987543211111000 0 113677899999999999999999999999999999999999999999999999
Q ss_pred ecCC-CCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCccccc
Q 015438 277 FGDE-SGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCN 355 (407)
Q Consensus 277 ~s~~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 355 (407)
|+|. ++++|++|+.|+.|++||++ .++++..+.+|...|++++|+|++.+|++++.|++|++||+++.+....+.
T Consensus 204 ~~~~~~g~~l~sgs~Dg~v~~wd~~----~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~ 279 (354)
T 2pbi_B 204 LAPSETGNTFVSGGCDKKAMVWDMR----SGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYS 279 (354)
T ss_dssp ECCCSSCCEEEEEETTSCEEEEETT----TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred EEeCCCCCEEEEEeCCCeEEEEECC----CCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEc
Confidence 9854 57899999999999999998 888999999999999999999999999999999999999999876544332
Q ss_pred CCCccccccceeeeCCCCCCccCCC-CCcceEEEe-----------CCccceeeEEEeeCCCCC
Q 015438 356 LGFRSYEWDYRWMDYPPQARDLKHP-CDQSVATYK-----------GHSVLRTLIRCHFSPVYR 407 (407)
Q Consensus 356 ~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~v~~~~-----------gh~~~~~~~~~~fsp~~~ 407 (407)
.......+..+.|+|++++|+++ .|+.|++|+ +|.. .+..+.||||.+
T Consensus 280 --~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~--~v~~l~~spdg~ 339 (354)
T 2pbi_B 280 --KESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHEN--RVSTLRVSPDGT 339 (354)
T ss_dssp --CTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSS--CEEEEEECTTSS
T ss_pred --CCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCC--cEEEEEECCCCC
Confidence 12234567889999999888765 567788876 4553 688899999974
No 6
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.4e-39 Score=293.79 Aligned_cols=268 Identities=19% Similarity=0.251 Sum_probs=217.6
Q ss_pred cccccCCC-ceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEE
Q 015438 118 WPVDQTTS-RAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (407)
Q Consensus 118 ~~~~~h~~-~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vw 196 (407)
..+.+|.. .|++++|+|+|++||+|+.|+.|+|||+.++..........+|...|.+++|+|++++|++++.|+.+++|
T Consensus 9 ~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw 88 (345)
T 3fm0_A 9 GRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIW 88 (345)
T ss_dssp EEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEE
Confidence 34667877 99999999999999999999999999998875444444556788899999999999999999999999999
Q ss_pred ECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCe---eeeeeeccCCCeE
Q 015438 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK---LSLRILAHTSDVN 273 (407)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~v~ 273 (407)
++..+....... ..+|...|.+++|+|++++|++|+.|+.|++||++++. ++..+..|...|.
T Consensus 89 ~~~~~~~~~~~~--------------~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~ 154 (345)
T 3fm0_A 89 KKNQDDFECVTT--------------LEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVK 154 (345)
T ss_dssp EECCC-EEEEEE--------------ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEE
T ss_pred EccCCCeEEEEE--------------ccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeE
Confidence 998765322221 12577799999999999999999999999999998763 4566778999999
Q ss_pred EEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCc--eeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCc
Q 015438 274 TVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGK--PAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSN 351 (407)
Q Consensus 274 ~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~--~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 351 (407)
+++|+ +++++|++++.|+.|++||.+ .+. +...+.+|...|++++|+|+|++|++++.|++|++||+......
T Consensus 155 ~~~~~-p~~~~l~s~s~d~~i~~w~~~----~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~ 229 (345)
T 3fm0_A 155 HVVWH-PSQELLASASYDDTVKLYREE----EDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNE 229 (345)
T ss_dssp EEEEC-SSSSCEEEEETTSCEEEEEEE----TTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCT
T ss_pred EEEEC-CCCCEEEEEeCCCcEEEEEec----CCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCC
Confidence 99998 788999999999999999997 443 45678899999999999999999999999999999997543322
Q ss_pred ccccC-----------C-CccccccceeeeCCCCCCccCC-CCCcceEEEe--------------------CCccceeeE
Q 015438 352 ASCNL-----------G-FRSYEWDYRWMDYPPQARDLKH-PCDQSVATYK--------------------GHSVLRTLI 398 (407)
Q Consensus 352 ~~~~~-----------~-~~~~~~~v~~~~~~~~~~~l~~-~~~~~v~~~~--------------------gh~~~~~~~ 398 (407)
..... . ...+...+..++|+|++..|++ +.|+.+++|+ +|. ..|.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~--~~V~ 307 (345)
T 3fm0_A 230 QGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHS--QDVN 307 (345)
T ss_dssp TCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSS--SCEE
T ss_pred ccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeeccccc--CcEe
Confidence 11100 0 1124556888999999876654 5688888885 343 3688
Q ss_pred EEeeCCCC
Q 015438 399 RCHFSPVY 406 (407)
Q Consensus 399 ~~~fsp~~ 406 (407)
.+.|+|+.
T Consensus 308 ~v~~~p~~ 315 (345)
T 3fm0_A 308 CVAWNPKE 315 (345)
T ss_dssp EEEECSSS
T ss_pred EeEEeCCC
Confidence 89999975
No 7
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.1e-39 Score=289.35 Aligned_cols=264 Identities=17% Similarity=0.200 Sum_probs=222.7
Q ss_pred cccccCCCceEEEEECCCC-CEEEEEeCCCeEEEEEcCCCe--EEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEE
Q 015438 118 WPVDQTTSRAYVSQFSADG-SLFVAGFQASQIRIYDVERGW--KIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVH 194 (407)
Q Consensus 118 ~~~~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~ 194 (407)
..+.+|.+.|.+++|+|++ ++|++|+.|+.|++|++.... .........+|...|.+++|+|++++|++++.|+.|+
T Consensus 11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~ 90 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLR 90 (319)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEE
Confidence 3578999999999999965 899999999999999986421 1122334567888999999999999999999999999
Q ss_pred EEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEE
Q 015438 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNT 274 (407)
Q Consensus 195 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~ 274 (407)
+||+.+++....+. +|...|.+++|+|++.+|++|+.|++|++||++ ++.+..+.+|...|.+
T Consensus 91 ~wd~~~~~~~~~~~----------------~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~ 153 (319)
T 3frx_A 91 LWDVATGETYQRFV----------------GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQ 153 (319)
T ss_dssp EEETTTTEEEEEEE----------------CCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEE
T ss_pred EEECCCCCeeEEEc----------------cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEE
Confidence 99999887543322 477799999999999999999999999999997 5567788899999999
Q ss_pred EEecCC-----CCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCC
Q 015438 275 VCFGDE-----SGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMS 349 (407)
Q Consensus 275 i~~s~~-----~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 349 (407)
+.|+|. ++.++++++.|+.|++||++ ..+....+.+|...|++++|+|+|++|++++.||.|++||+++.+
T Consensus 154 ~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~----~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 154 VRVVPNEKADDDSVTIISAGNDKMVKAWNLN----QFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKK 229 (319)
T ss_dssp EEECCC------CCEEEEEETTSCEEEEETT----TTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred EEEccCCCCCCCccEEEEEeCCCEEEEEECC----cchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 999853 45589999999999999998 778888899999999999999999999999999999999999987
Q ss_pred CcccccCCCccccccceeeeCCCCCCccCCCCCcceEEEeCCcc-----------------ceeeEEEeeCCCCC
Q 015438 350 SNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSV-----------------LRTLIRCHFSPVYR 407 (407)
Q Consensus 350 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~gh~~-----------------~~~~~~~~fsp~~~ 407 (407)
.+..+. ....+..++|+|++.+++++.+..+++|.-... ...+..++||||++
T Consensus 230 ~~~~~~-----~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 299 (319)
T 3frx_A 230 AMYTLS-----AQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQ 299 (319)
T ss_dssp EEEEEE-----CCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSS
T ss_pred EEEEec-----CCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCC
Confidence 765542 234688999999999999988888888863321 12467899999975
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4e-39 Score=290.11 Aligned_cols=261 Identities=14% Similarity=0.230 Sum_probs=222.0
Q ss_pred ccccCCCceEEEEECCC----CCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEE
Q 015438 119 PVDQTTSRAYVSQFSAD----GSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVH 194 (407)
Q Consensus 119 ~~~~h~~~v~~~~~s~~----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~ 194 (407)
.+.+|.+.|++++|+|+ +.+|++|+.|+.|+||++..+.. .......+|...|.+++|+|++.++++++.|+.|+
T Consensus 27 ~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~-~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~ 105 (321)
T 3ow8_A 27 QEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERL-DLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIR 105 (321)
T ss_dssp ETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred ecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCe-eeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 34689999999999985 56899999999999999987643 22334678888999999999999999999999999
Q ss_pred EEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEE
Q 015438 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNT 274 (407)
Q Consensus 195 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~ 274 (407)
+||+.+++...... .+...+.+++|+|++++|++|+.||.|++||+++++....+..|...|.+
T Consensus 106 lWd~~~~~~~~~~~----------------~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~ 169 (321)
T 3ow8_A 106 LWDLENGKQIKSID----------------AGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILS 169 (321)
T ss_dssp EEETTTTEEEEEEE----------------CCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEE
T ss_pred EEECCCCCEEEEEe----------------CCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEE
Confidence 99999887544332 23446888999999999999999999999999999998889899999999
Q ss_pred EEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccc
Q 015438 275 VCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASC 354 (407)
Q Consensus 275 i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 354 (407)
++|+ +++++|++|+.|+.|++||++ .++++..+.+|..+|++++|+|++++|++++.|+.|++||+++.+....
T Consensus 170 ~~~s-pdg~~lasg~~dg~i~iwd~~----~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~- 243 (321)
T 3ow8_A 170 IAYS-PDGKYLASGAIDGIINIFDIA----TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT- 243 (321)
T ss_dssp EEEC-TTSSEEEEEETTSCEEEEETT----TTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEE-
T ss_pred EEEC-CCCCEEEEEcCCCeEEEEECC----CCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEE-
Confidence 9998 889999999999999999998 8889999999999999999999999999999999999999998766544
Q ss_pred cCCCccccccceeeeCCCCCCccCC-CCCcceEEEe-----------CCccceeeEEEeeCCCCC
Q 015438 355 NLGFRSYEWDYRWMDYPPQARDLKH-PCDQSVATYK-----------GHSVLRTLIRCHFSPVYR 407 (407)
Q Consensus 355 ~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~v~~~~-----------gh~~~~~~~~~~fsp~~~ 407 (407)
...+...+..++|+|++++|++ +.|+.|++|+ +|. ..+..+.|+|+.+
T Consensus 244 ---~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~--~~v~~v~~s~~g~ 303 (321)
T 3ow8_A 244 ---LSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQ--DQVWGVKYNGNGS 303 (321)
T ss_dssp ---ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS--SCEEEEEECTTSS
T ss_pred ---EcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCC--CcEEEEEECCCCC
Confidence 3445667889999999976654 5678888886 343 3678899999864
No 9
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.5e-39 Score=289.23 Aligned_cols=260 Identities=21% Similarity=0.300 Sum_probs=222.5
Q ss_pred ccccceeeeeccCC--CCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECC
Q 015438 102 ADCCHMLSRYLPVN--GPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (407)
Q Consensus 102 ~~~~~~~~~~~~~~--~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp 179 (407)
.|....+|+..... ..+.+.+|...|.+++|+|++.++++++.|+.|++||+.++..+... ..+...+.+++|+|
T Consensus 56 ~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~---~~~~~~~~~~~~sp 132 (321)
T 3ow8_A 56 LDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSI---DAGPVDAWTLAFSP 132 (321)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE---ECCTTCCCCEEECT
T ss_pred CCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEE---eCCCccEEEEEECC
Confidence 34445566554332 23457899999999999999999999999999999999998665543 34455688999999
Q ss_pred CCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCC
Q 015438 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259 (407)
Q Consensus 180 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~ 259 (407)
++++|++++.++.|++|+++++....... .+...|.+++|+|++++|++|+.||.|++||++++
T Consensus 133 dg~~l~~g~~dg~v~i~~~~~~~~~~~~~----------------~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~ 196 (321)
T 3ow8_A 133 DSQYLATGTHVGKVNIFGVESGKKEYSLD----------------TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG 196 (321)
T ss_dssp TSSEEEEECTTSEEEEEETTTCSEEEEEE----------------CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred CCCEEEEEcCCCcEEEEEcCCCceeEEec----------------CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 99999999999999999999876543221 24447999999999999999999999999999999
Q ss_pred eeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCc
Q 015438 260 KLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQA 339 (407)
Q Consensus 260 ~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~ 339 (407)
+.+..+.+|..+|.+++|+ +++++|++|+.|+.|++||++ .+..+..+.+|...|.+++|+|++++|++++.|++
T Consensus 197 ~~~~~~~~h~~~v~~l~~s-pd~~~l~s~s~dg~i~iwd~~----~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~ 271 (321)
T 3ow8_A 197 KLLHTLEGHAMPIRSLTFS-PDSQLLVTASDDGYIKIYDVQ----HANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKS 271 (321)
T ss_dssp EEEEEECCCSSCCCEEEEC-TTSCEEEEECTTSCEEEEETT----TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred cEEEEEcccCCceeEEEEc-CCCCEEEEEcCCCeEEEEECC----CcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCc
Confidence 9999999999999999998 789999999999999999998 78888999999999999999999999999999999
Q ss_pred EEEEECCCCCCcccccCCCccccccceeeeCCCCCCccC-CCCCcceEEEe
Q 015438 340 IKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLK-HPCDQSVATYK 389 (407)
Q Consensus 340 i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~v~~~~ 389 (407)
|++||+++++.+..+ ..+...|..++|+|+++.|+ ++.|+.|++|+
T Consensus 272 v~iwd~~~~~~~~~~----~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 272 VKVWDVGTRTCVHTF----FDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp EEEEETTTTEEEEEE----CCCSSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred EEEEeCCCCEEEEEE----cCCCCcEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 999999998776654 34556788999999986554 56789999997
No 10
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=291.92 Aligned_cols=245 Identities=12% Similarity=0.062 Sum_probs=206.6
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEe-eeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCC
Q 015438 122 QTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKD-ILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGS 200 (407)
Q Consensus 122 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~ 200 (407)
.|...|.+++|+|++ .|++|+.||.|+|||+.+++.+... ....+|...|++++|+|++++|++|+.|+.|++||+.+
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 457789999999985 6889999999999999987654332 23457888999999999999999999999999999998
Q ss_pred CceeccccccccccceeeeecCCCCccccEEEEEEeCCCC-EEEEeeCCCeEEEEEcCCCeeeeeee--ccCCCeEEEEe
Q 015438 201 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR-ELVAGSSDDCIYVYDLEANKLSLRIL--AHTSDVNTVCF 277 (407)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~i~~ 277 (407)
++....+. +|...|.+++|+|++. +|++++.|++|++||+++++....+. .+...+.+++|
T Consensus 159 ~~~~~~~~----------------~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 222 (344)
T 4gqb_B 159 QVVLSSYR----------------AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAW 222 (344)
T ss_dssp TEEEEEEC----------------CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEE
T ss_pred CcEEEEEc----------------CcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeee
Confidence 87654332 5778999999999885 78999999999999999998877764 45567999999
Q ss_pred cCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCC-CEEEEEeCCCcEEEEECCCCCCcccccC
Q 015438 278 GDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDG-RYLISNGKDQAIKLWDIRKMSSNASCNL 356 (407)
Q Consensus 278 s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 356 (407)
+|.++++|++|+.|+.|++||++ .++++..+.+|...|++++|+|++ ++|++|+.|++|+|||+++++...
T Consensus 223 ~p~~~~~l~sg~~dg~v~~wd~~----~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~---- 294 (344)
T 4gqb_B 223 HPQQSEVFVFGDENGTVSLVDTK----STSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR---- 294 (344)
T ss_dssp CSSCTTEEEEEETTSEEEEEESC----C--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE----
T ss_pred cCCCCcceEEeccCCcEEEEECC----CCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE----
Confidence 97788999999999999999998 888999999999999999999998 589999999999999999876432
Q ss_pred CCccccccceeeeCCCCCC-ccC-CCCCcceEEEeCCc
Q 015438 357 GFRSYEWDYRWMDYPPQAR-DLK-HPCDQSVATYKGHS 392 (407)
Q Consensus 357 ~~~~~~~~v~~~~~~~~~~-~l~-~~~~~~v~~~~gh~ 392 (407)
...|...|..++|+|+++ +|+ ++.|+.|++|+-.+
T Consensus 295 -~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 295 -SQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp -ECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred -EcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 345667799999999986 453 56799999998654
No 11
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.5e-38 Score=285.58 Aligned_cols=265 Identities=15% Similarity=0.203 Sum_probs=215.6
Q ss_pred CcccccCCCceEEEEE-----CC-CCCEEEEEeCCCeEEEEEcCCCeE----EeEeeeccccceEEEEEEECCCCCeEEE
Q 015438 117 PWPVDQTTSRAYVSQF-----SA-DGSLFVAGFQASQIRIYDVERGWK----IQKDILAKSLRWTVTDTSLSPDQRHLVY 186 (407)
Q Consensus 117 ~~~~~~h~~~v~~~~~-----s~-~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~~v~~~~~sp~~~~l~~ 186 (407)
...+.+|.+.|++++| ++ ++++|++|+.|+.|+|||+..+.. ........+|...|.+++|+|++.+|++
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s 93 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS 93 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence 3467899999999999 77 899999999999999999875421 1222345678889999999999999999
Q ss_pred EeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeee
Q 015438 187 ASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL 266 (407)
Q Consensus 187 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 266 (407)
++.|+.|++||+.+++....+. +|...|.+++|+|++++|++++.|+.|++||+.... ...+.
T Consensus 94 ~s~D~~v~lwd~~~~~~~~~~~----------------~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~ 156 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYKRFV----------------GHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-KFSSA 156 (343)
T ss_dssp EETTSEEEEEETTSSCEEEEEE----------------CCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-EEECC
T ss_pred EcCCCcEEEEECCCCcEEEEEc----------------CCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-eeeee
Confidence 9999999999999886543321 477799999999999999999999999999998443 33332
Q ss_pred ---ccCCCeEEEEecCCC---------CCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEE
Q 015438 267 ---AHTSDVNTVCFGDES---------GHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISN 334 (407)
Q Consensus 267 ---~~~~~v~~i~~s~~~---------~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~ 334 (407)
.|...|.+++|+|.. +.+|++++.|+.|++||. .......+.+|...|++++|+|+|++|++|
T Consensus 157 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-----~~~~~~~~~~h~~~v~~~~~s~~g~~l~sg 231 (343)
T 2xzm_R 157 EKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-----NFQIRYTFKAHESNVNHLSISPNGKYIATG 231 (343)
T ss_dssp TTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-----TTEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred cccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-----CCceeEEEcCccccceEEEECCCCCEEEEE
Confidence 688899999998432 278999999999999995 466777889999999999999999999999
Q ss_pred eCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCCCCCcceEEEeCCcc---------------------
Q 015438 335 GKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSV--------------------- 393 (407)
Q Consensus 335 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~gh~~--------------------- 393 (407)
+.||.|++||+++....... ......+..++|+|++++++++.|+.+++|+-.+.
T Consensus 232 s~dg~v~iwd~~~~~~~~~~----~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (343)
T 2xzm_R 232 GKDKKLLIWDILNLTYPQRE----FDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKG 307 (343)
T ss_dssp ETTCEEEEEESSCCSSCSEE----EECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCC
T ss_pred cCCCeEEEEECCCCccccee----ecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcC
Confidence 99999999999654433221 11234588999999999999999999999973211
Q ss_pred -ceeeEEEeeCCCCC
Q 015438 394 -LRTLIRCHFSPVYR 407 (407)
Q Consensus 394 -~~~~~~~~fsp~~~ 407 (407)
...+..++|+|+++
T Consensus 308 ~~~~v~~~~~sp~g~ 322 (343)
T 2xzm_R 308 KNPQCTSLAWNALGK 322 (343)
T ss_dssp SCCCEEEEEECSSSC
T ss_pred CCCceEEEEECCCCC
Confidence 12467899999864
No 12
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.4e-39 Score=298.70 Aligned_cols=273 Identities=16% Similarity=0.184 Sum_probs=223.8
Q ss_pred CcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEE
Q 015438 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (407)
Q Consensus 117 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vw 196 (407)
...+.+|.+.|++++|+|++++|++|+.|+.|+|||+.++..... ...|...|.+++|+|++++|++|+.|+.+++|
T Consensus 59 ~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~---~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw 135 (380)
T 3iz6_a 59 CRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHA---IKLHCPWVMECAFAPNGQSVACGGLDSACSIF 135 (380)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEE---EECCCTTCCCCEECTTSSEEEECCSSSCCEEE
T ss_pred eecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceE---EecCCCCEEEEEECCCCCEEEEeeCCCcEEEE
Confidence 346789999999999999999999999999999999998865544 34566679999999999999999999999999
Q ss_pred ECCCCceec-cccccccccceeeeecCCCCccccEEEEEEeCCC-CEEEEeeCCCeEEEEEcCCCeeeeee-----eccC
Q 015438 197 DVGSGTMES-LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG-RELVAGSSDDCIYVYDLEANKLSLRI-----LAHT 269 (407)
Q Consensus 197 d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~-----~~~~ 269 (407)
++.+..... .... .....+|...|.++.|+|++ ..|++|+.|++|++||+++++.+..+ .+|.
T Consensus 136 ~~~~~~~~~~~~~~----------~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~ 205 (380)
T 3iz6_a 136 NLSSQADRDGNMPV----------SRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHT 205 (380)
T ss_dssp ECCCCSSCCCSSTT----------CCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCC
T ss_pred ECCCCccccCCccc----------eeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCc
Confidence 997643211 0000 01123688889999999974 57999999999999999999988776 5788
Q ss_pred CCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCC
Q 015438 270 SDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMS 349 (407)
Q Consensus 270 ~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 349 (407)
..|.+++|++.++++|++|+.|+.|++||++. ...++..+.+|...|++++|+|++++|++|+.||+|++||+++++
T Consensus 206 ~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~---~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~ 282 (380)
T 3iz6_a 206 ADVLSLSINSLNANMFISGSCDTTVRLWDLRI---TSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGH 282 (380)
T ss_dssp SCEEEEEECSSSCCEEEEEETTSCEEEEETTT---TCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTE
T ss_pred cCeEEEEeecCCCCEEEEEECCCeEEEEECCC---CCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCc
Confidence 99999999877999999999999999999972 346778899999999999999999999999999999999999987
Q ss_pred CcccccCCC---ccccccceeeeCCCCCCccCCC-CCcceEEEeC---------------CccceeeEEEeeCCCCC
Q 015438 350 SNASCNLGF---RSYEWDYRWMDYPPQARDLKHP-CDQSVATYKG---------------HSVLRTLIRCHFSPVYR 407 (407)
Q Consensus 350 ~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~-~~~~v~~~~g---------------h~~~~~~~~~~fsp~~~ 407 (407)
.+..+.... ......+..++|+|++++|+++ .|+.|++|+. |. ..+..+.||||++
T Consensus 283 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~--~~v~~l~~s~dg~ 357 (380)
T 3iz6_a 283 QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHE--GRISCLGLSSDGS 357 (380)
T ss_dssp EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCC--CCCCEEEECSSSS
T ss_pred EEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCC--CceEEEEECCCCC
Confidence 765543221 1122347889999999888665 6888999863 33 3677889999874
No 13
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=288.30 Aligned_cols=263 Identities=18% Similarity=0.157 Sum_probs=206.3
Q ss_pred ccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCC--------eEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCe
Q 015438 121 DQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERG--------WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPI 192 (407)
Q Consensus 121 ~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~ 192 (407)
..|...|.+++|+|||++|++++ |+++++||.... ...........+...|.+++|+|++ .|++|+.||.
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~ 104 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGA 104 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSE
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCE
Confidence 34677899999999999999887 677888863210 0000000112234569999999985 6889999999
Q ss_pred EEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCe
Q 015438 193 VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDV 272 (407)
Q Consensus 193 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v 272 (407)
|+|||+.+++........ ..+|...|++++|+|+|++|++|+.|++|++||+++++++..+.+|...|
T Consensus 105 v~lWd~~~~~~~~~~~~~------------~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V 172 (344)
T 4gqb_B 105 VELWELDENETLIVSKFC------------KYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQV 172 (344)
T ss_dssp EEEEEECTTSSCEEEEEE------------EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred EEEEeccCCCceeEeecc------------ccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCce
Confidence 999999988754433211 12577899999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeec--cccCCeEEEEecCC-CCEEEEEeCCCcEEEEECCCCC
Q 015438 273 NTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLM--GHLEGITFIDSRGD-GRYLISNGKDQAIKLWDIRKMS 349 (407)
Q Consensus 273 ~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~--~~~~~i~~~~~s~~-~~~l~s~~~dg~i~iwd~~~~~ 349 (407)
.+++|+|....+|++++.|+.|++||++ .++++..+. .|...+++++|+|+ +++|++|+.||+|++||+++++
T Consensus 173 ~~~~~~~~~~~~l~s~s~D~~v~iwd~~----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~ 248 (344)
T 4gqb_B 173 TCVAASPHKDSVFLSCSEDNRILLWDTR----CPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS 248 (344)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETT----SSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--
T ss_pred EEEEecCCCCCceeeecccccccccccc----ccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCc
Confidence 9999996666789999999999999998 777776664 45567999999985 5788999999999999999988
Q ss_pred CcccccCCCccccccceeeeCCCCC-CccC-CCCCcceEEEe----------CCccceeeEEEeeCCCCC
Q 015438 350 SNASCNLGFRSYEWDYRWMDYPPQA-RDLK-HPCDQSVATYK----------GHSVLRTLIRCHFSPVYR 407 (407)
Q Consensus 350 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~-~~~~~~v~~~~----------gh~~~~~~~~~~fsp~~~ 407 (407)
.+..+ ..+...|..+.|+|++ ++|+ .+.|+.|++|+ ||.. .|..+.|||+.+
T Consensus 249 ~~~~~----~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~--~V~~v~~sp~~~ 312 (344)
T 4gqb_B 249 CVLSS----AVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRD--FVRDATWSPLNH 312 (344)
T ss_dssp CCEEE----ECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSS--CEEEEEECSSST
T ss_pred EEEEE----cCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCC--CEEEEEEeCCCC
Confidence 76653 4456678999999997 5565 55788888886 4553 688999999864
No 14
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5.1e-38 Score=280.87 Aligned_cols=263 Identities=16% Similarity=0.202 Sum_probs=218.0
Q ss_pred ccccceeeeeccCCCCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCC
Q 015438 102 ADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQ 181 (407)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 181 (407)
.+....+|+.........+..|..+|.+++|+|++++|++|+.|+.|++||+.++..+.. ...|...|.+++|+|++
T Consensus 33 ~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~---~~~h~~~v~~~~~~~~~ 109 (304)
T 2ynn_A 33 YSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVD---FEAHPDYIRSIAVHPTK 109 (304)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEE---EECCSSCEEEEEECSSS
T ss_pred CCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEE---EeCCCCcEEEEEEcCCC
Confidence 345566777666666677889999999999999999999999999999999999866543 45688889999999999
Q ss_pred CeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeC-CCCEEEEeeCCCeEEEEEcCCCe
Q 015438 182 RHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSDDCIYVYDLEANK 260 (407)
Q Consensus 182 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~ 260 (407)
++|++|+.|+.|++||++++...... ..+|...|.+++|+| ++.+|++|+.|++|++||+++..
T Consensus 110 ~~l~sgs~D~~v~lWd~~~~~~~~~~---------------~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~ 174 (304)
T 2ynn_A 110 PYVLSGSDDLTVKLWNWENNWALEQT---------------FEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (304)
T ss_dssp SEEEEEETTSCEEEEEGGGTTEEEEE---------------ECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSS
T ss_pred CEEEEECCCCeEEEEECCCCcchhhh---------------hcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 99999999999999999866322110 124777899999999 67899999999999999998877
Q ss_pred eeeeee-ccCCCeEEEEecC-CCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCC
Q 015438 261 LSLRIL-AHTSDVNTVCFGD-ESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQ 338 (407)
Q Consensus 261 ~~~~~~-~~~~~v~~i~~s~-~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg 338 (407)
....+. .|...+..+.|+| +++.+|++|+.|+.|++||++ .++++..+.+|...|++++|+|++.+|++|+.||
T Consensus 175 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~----~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg 250 (304)
T 2ynn_A 175 PNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ----TKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDG 250 (304)
T ss_dssp CSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETT----TTEEEEEEECCSSCEEEEEECSSSSEEEEEETTS
T ss_pred ccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCC----CCccceeeCCCCCCEEEEEECCCCCEEEEEcCCC
Confidence 665554 4567899999985 367899999999999999998 8889999999999999999999999999999999
Q ss_pred cEEEEECCCCCCcccccCCCccccccceeeeCCCCCC--ccCCCCCcceEEEeC
Q 015438 339 AIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQAR--DLKHPCDQSVATYKG 390 (407)
Q Consensus 339 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~~~v~~~~g 390 (407)
+|++||+++++....+. .+...+.+++++|+++ +++++.++.+.+|.-
T Consensus 251 ~i~iWd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~ 300 (304)
T 2ynn_A 251 TLKIWNSSTYKVEKTLN----VGLERSWCIATHPTGRKNYIASGFDNGFTVLSL 300 (304)
T ss_dssp CEEEEETTTCCEEEEEC----CSSSSEEEEEECTTCGGGCEEEEETTEEEEEEC
T ss_pred eEEEEECCCCceeeecc----CCCccEEEEEECCCCCceEEEEecCCceEEEEe
Confidence 99999999987766542 3344566788777764 477777776766653
No 15
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.7e-37 Score=281.92 Aligned_cols=262 Identities=18% Similarity=0.270 Sum_probs=221.1
Q ss_pred ccccceeeeeccCCCCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeE-EeEeeeccccceEEEEEEECCC
Q 015438 102 ADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWK-IQKDILAKSLRWTVTDTSLSPD 180 (407)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~sp~ 180 (407)
.+....+|+.........+..|...|.+++|+|++++|++|+.|+.|++|++.++.. ........+|...|.++.|+++
T Consensus 75 ~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 154 (340)
T 1got_B 75 QDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD 154 (340)
T ss_dssp TTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEET
T ss_pred CCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCC
Confidence 455666777777777777889999999999999999999999999999999987532 1222334568888999999988
Q ss_pred CCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCe
Q 015438 181 QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK 260 (407)
Q Consensus 181 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~ 260 (407)
+. +++++.|+.|++||+.+++....+. +|...|.+++|+|++++|++|+.|+.|++||+++++
T Consensus 155 ~~-l~s~s~d~~i~~wd~~~~~~~~~~~----------------~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~ 217 (340)
T 1got_B 155 NQ-IVTSSGDTTCALWDIETGQQTTTFT----------------GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM 217 (340)
T ss_dssp TE-EEEEETTSCEEEEETTTTEEEEEEC----------------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS
T ss_pred Cc-EEEEECCCcEEEEECCCCcEEEEEc----------------CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Confidence 75 8899999999999999886543322 467789999999999999999999999999999999
Q ss_pred eeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeec--cccCCeEEEEecCCCCEEEEEeCCC
Q 015438 261 LSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLM--GHLEGITFIDSRGDGRYLISNGKDQ 338 (407)
Q Consensus 261 ~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~s~~~dg 338 (407)
++..+.+|...|.+++|+ +++++|++|+.|+.|++||++ .++.+..+. .+...|++++|+|+|++|++|+.|+
T Consensus 218 ~~~~~~~h~~~v~~v~~~-p~~~~l~s~s~d~~v~iwd~~----~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~ 292 (340)
T 1got_B 218 CRQTFTGHESDINAICFF-PNGNAFATGSDDATCRLFDLR----ADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF 292 (340)
T ss_dssp EEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETT----TTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred eEEEEcCCcCCEEEEEEc-CCCCEEEEEcCCCcEEEEECC----CCcEEEEEccCCcccceEEEEECCCCCEEEEECCCC
Confidence 999999999999999998 789999999999999999998 666666554 2345799999999999999999999
Q ss_pred cEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCC-CCCcceEEEe
Q 015438 339 AIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKH-PCDQSVATYK 389 (407)
Q Consensus 339 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~v~~~~ 389 (407)
.|++||+.+.+.... ...+...|.++.|+|++++|++ +.|+.|++|+
T Consensus 293 ~i~vwd~~~~~~~~~----~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 293 NCNVWDALKADRAGV----LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEEETTTCCEEEE----EECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred eEEEEEcccCcEeeE----eecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999999998776544 3456678999999999987765 5688999985
No 16
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5e-37 Score=275.45 Aligned_cols=263 Identities=23% Similarity=0.355 Sum_probs=216.0
Q ss_pred cccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEE
Q 015438 118 WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVD 197 (407)
Q Consensus 118 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd 197 (407)
..+.+|...|.+++|+|++++|++|+.||.|++|++.++..... ...|...|.+++|+|++++|++++.|+.|++||
T Consensus 17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd 93 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT---ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD 93 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE---ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchh---hccCCCceEEEEEcCCCCEEEEECCCCEEEEEE
Confidence 45678999999999999999999999999999999988755443 456777899999999999999999999999999
Q ss_pred CCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEe
Q 015438 198 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCF 277 (407)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~ 277 (407)
+.+++...... +|...|.+++|+|++++|++|+.|+.|++||+++++.+..+..|..+|.+++|
T Consensus 94 ~~~~~~~~~~~----------------~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 157 (312)
T 4ery_A 94 VSSGKCLKTLK----------------GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHF 157 (312)
T ss_dssp TTTCCEEEEEE----------------CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred CCCCcEEEEEc----------------CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEE
Confidence 99886544322 36668999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeec-cccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccC
Q 015438 278 GDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLM-GHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNL 356 (407)
Q Consensus 278 s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 356 (407)
+ +++++|++++.|+.|++||++ .++.+..+. .+...+..++|+|++++|++++.|+.|++||+++++....+..
T Consensus 158 ~-~~~~~l~~~~~d~~i~~wd~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 232 (312)
T 4ery_A 158 N-RDGSLIVSSSYDGLCRIWDTA----SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG 232 (312)
T ss_dssp C-TTSSEEEEEETTSCEEEEETT----TCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECS
T ss_pred c-CCCCEEEEEeCCCcEEEEECC----CCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEe
Confidence 8 789999999999999999998 667666654 4567899999999999999999999999999998876655432
Q ss_pred CCccccccceeeeCCCCCCcc-CCCCCcceEEEe-----------CCccceeeEEEeeCCCCC
Q 015438 357 GFRSYEWDYRWMDYPPQARDL-KHPCDQSVATYK-----------GHSVLRTLIRCHFSPVYR 407 (407)
Q Consensus 357 ~~~~~~~~v~~~~~~~~~~~l-~~~~~~~v~~~~-----------gh~~~~~~~~~~fsp~~~ 407 (407)
+......+......+++.++ +.+.|+.|++|+ +|.. .+..+.|+|+.+
T Consensus 233 -~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~--~v~~~~~~p~~~ 292 (312)
T 4ery_A 233 -HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD--VVISTACHPTEN 292 (312)
T ss_dssp -SCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSS--CEEEEEECSSSS
T ss_pred -cCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCC--cEEEEeecCcCC
Confidence 22222233333334555544 455677777776 4543 678899999863
No 17
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.8e-37 Score=273.62 Aligned_cols=259 Identities=17% Similarity=0.142 Sum_probs=204.2
Q ss_pred ccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCC--CCeEEEEeCCCeEEEE
Q 015438 119 PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD--QRHLVYASMSPIVHIV 196 (407)
Q Consensus 119 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~dg~i~vw 196 (407)
++.+|.+.|.+++|+|+|++||+|+.|+.|+|||+..+.. .......+|..+|.+++|+|+ +++|++|+.|++|++|
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~-~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH-KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB-CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc-EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 4678999999999999999999999999999999975311 122345678889999999864 8999999999999999
Q ss_pred ECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCC--CCEEEEeeCCCeEEEEEcCCCe--eeeeeeccCCCe
Q 015438 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD--GRELVAGSSDDCIYVYDLEANK--LSLRILAHTSDV 272 (407)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~v 272 (407)
|++++........ .+|...|.+++|+|+ +.+|++++.|+.|++||++++. ....+.+|...|
T Consensus 83 d~~~~~~~~~~~~--------------~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v 148 (297)
T 2pm7_B 83 KEENGRWSQIAVH--------------AVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGV 148 (297)
T ss_dssp EBSSSCBCCCEEE--------------CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCE
T ss_pred EcCCCceEEEEEe--------------ecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCcc
Confidence 9987643222111 146678999999997 8899999999999999998763 235677899999
Q ss_pred EEEEecCC------------CCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCC---CEEEEEeCC
Q 015438 273 NTVCFGDE------------SGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDG---RYLISNGKD 337 (407)
Q Consensus 273 ~~i~~s~~------------~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~---~~l~s~~~d 337 (407)
.+++|+|. ++++|++|+.|+.|++||++...........+.+|...|.+++|+|++ .+|++++.|
T Consensus 149 ~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D 228 (297)
T 2pm7_B 149 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQD 228 (297)
T ss_dssp EEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT
T ss_pred ceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECC
Confidence 99999853 257999999999999999972211122567788999999999999985 899999999
Q ss_pred CcEEEEECCCCCCcccc-cCCCccccccceeeeCCCCCCccCC-CCCcceEEEeCCc
Q 015438 338 QAIKLWDIRKMSSNASC-NLGFRSYEWDYRWMDYPPQARDLKH-PCDQSVATYKGHS 392 (407)
Q Consensus 338 g~i~iwd~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~v~~~~gh~ 392 (407)
++|+|||+++....... ......+...+..++|+|++++|++ +.|+.|++|+-..
T Consensus 229 ~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 229 RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp SCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred CcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 99999999875421110 1111234556788999999988865 5689999998653
No 18
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.3e-37 Score=284.58 Aligned_cols=263 Identities=19% Similarity=0.184 Sum_probs=205.2
Q ss_pred ccCCCceEEEEECCCCCEEEEEeC------CCeEEEEEcCCCeEEeEe-eeccccceEEEEEEECCCCCeEEEEeCCCeE
Q 015438 121 DQTTSRAYVSQFSADGSLFVAGFQ------ASQIRIYDVERGWKIQKD-ILAKSLRWTVTDTSLSPDQRHLVYASMSPIV 193 (407)
Q Consensus 121 ~~h~~~v~~~~~s~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~-~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i 193 (407)
..|...|++++|||||++||+|+. |+.|++|+..++...... .....|...|.+++|+|+++ +++++.||.|
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v 117 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAV 117 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCE
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEE
Confidence 579999999999999999999997 778999998776433221 12335666799999999986 4567789999
Q ss_pred EEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeE
Q 015438 194 HIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVN 273 (407)
Q Consensus 194 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~ 273 (407)
+|||+.+++........ ..+|...|.+++|+|++++|++|+.|+.|++||+++++.+..+..|...|.
T Consensus 118 ~lWd~~~~~~~~~~~~~------------~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~ 185 (357)
T 4g56_B 118 ELWEILEKESLLVNKFA------------KYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVN 185 (357)
T ss_dssp EEC--------CCCCEE------------ECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred EEeeccccceeEEEeec------------cCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEE
Confidence 99999887654333221 125777999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeee--ccccCCeEEEEecCC-CCEEEEEeCCCcEEEEECCCCCC
Q 015438 274 TVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVL--MGHLEGITFIDSRGD-GRYLISNGKDQAIKLWDIRKMSS 350 (407)
Q Consensus 274 ~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~--~~~~~~i~~~~~s~~-~~~l~s~~~dg~i~iwd~~~~~~ 350 (407)
+++|+|....++++++.|+.|++||++ .++++..+ ..|...+++++|+|+ +.+|++|+.|+.|++||+++++.
T Consensus 186 ~v~~s~~~~~~~~s~~~dg~v~~wd~~----~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~ 261 (357)
T 4g56_B 186 CVAACPGKDTIFLSCGEDGRILLWDTR----KPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDS 261 (357)
T ss_dssp EEEECTTCSSCEEEEETTSCEEECCTT----SSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGG
T ss_pred EEEEccCCCceeeeeccCCceEEEECC----CCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcE
Confidence 999996556789999999999999998 55555443 456778999999997 56889999999999999999877
Q ss_pred cccccCCCccccccceeeeCCCCC-CccC-CCCCcceEEEeC----------CccceeeEEEeeCC-CC
Q 015438 351 NASCNLGFRSYEWDYRWMDYPPQA-RDLK-HPCDQSVATYKG----------HSVLRTLIRCHFSP-VY 406 (407)
Q Consensus 351 ~~~~~~~~~~~~~~v~~~~~~~~~-~~l~-~~~~~~v~~~~g----------h~~~~~~~~~~fsp-~~ 406 (407)
...+ ..+...|..++|+|++ ++|+ .+.|+.|++|+. |.. .|..++||| |.
T Consensus 262 ~~~~----~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~--~V~~vafsP~d~ 324 (357)
T 4g56_B 262 AQTS----AVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRD--FVTGVAWSPLDH 324 (357)
T ss_dssp CEEE----CCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSS--CEEEEEECSSST
T ss_pred eEEE----eccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCC--CEEEEEEeCCCC
Confidence 6553 3456678999999987 5665 457899999973 443 678899999 44
No 19
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4e-37 Score=301.20 Aligned_cols=281 Identities=15% Similarity=0.201 Sum_probs=226.7
Q ss_pred ccccceeeeeccCCCCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCC
Q 015438 102 ADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQ 181 (407)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 181 (407)
.+....+|..........+.+|...|++++|+|+|++||+|+.|+.|+|||+.++..... .....|..+|.+++|+|++
T Consensus 37 ~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~-~~~~~~~~~v~~v~fs~dg 115 (611)
T 1nr0_A 37 NGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILK-TTIPVFSGPVKDISWDSES 115 (611)
T ss_dssp ETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEE-EEEECSSSCEEEEEECTTS
T ss_pred CCCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceee-EeecccCCceEEEEECCCC
Confidence 445566777666677788899999999999999999999999999999999975432221 2345677889999999999
Q ss_pred CeEEEEeCC----CeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCC-EEEEeeCCCeEEEEEc
Q 015438 182 RHLVYASMS----PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR-ELVAGSSDDCIYVYDL 256 (407)
Q Consensus 182 ~~l~~~~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~ 256 (407)
++|++++.+ +.|++||. +..... ..+|...|.+++|+|++. .|++|+.|++|++||.
T Consensus 116 ~~l~~~~~~~~~~~~v~~wd~--~~~~~~----------------l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~ 177 (611)
T 1nr0_A 116 KRIAAVGEGRERFGHVFLFDT--GTSNGN----------------LTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEG 177 (611)
T ss_dssp CEEEEEECCSSCSEEEEETTT--CCBCBC----------------CCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEET
T ss_pred CEEEEEECCCCceeEEEEeeC--CCCcce----------------ecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEEC
Confidence 999998865 47888874 332211 225778999999999987 6999999999999999
Q ss_pred CCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeec-------cccCCeEEEEecCCCC
Q 015438 257 EANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLM-------GHLEGITFIDSRGDGR 329 (407)
Q Consensus 257 ~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~-------~~~~~i~~~~~s~~~~ 329 (407)
.+++++..+.+|...|.+++|+ +++++|++++.|++|++||++ .++++..+. +|...|.+++|+|+|+
T Consensus 178 ~~~~~~~~l~~H~~~V~~v~fs-pdg~~las~s~D~~i~lwd~~----~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~ 252 (611)
T 1nr0_A 178 PPFKFKSTFGEHTKFVHSVRYN-PDGSLFASTGGDGTIVLYNGV----DGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT 252 (611)
T ss_dssp TTBEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETT----TCCEEEECBCTTSSSCSSSSCEEEEEECTTSS
T ss_pred CCCeEeeeeccccCceEEEEEC-CCCCEEEEEECCCcEEEEECC----CCcEeeeeccccccccccCCCEEEEEECCCCC
Confidence 9999999999999999999998 789999999999999999998 777777773 7999999999999999
Q ss_pred EEEEEeCCCcEEEEECCCCCCcccccC---------------------------------------CCccccccceeeeC
Q 015438 330 YLISNGKDQAIKLWDIRKMSSNASCNL---------------------------------------GFRSYEWDYRWMDY 370 (407)
Q Consensus 330 ~l~s~~~dg~i~iwd~~~~~~~~~~~~---------------------------------------~~~~~~~~v~~~~~ 370 (407)
+|++++.|++|++||+++++....+.. ....+...+..++|
T Consensus 253 ~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~ 332 (611)
T 1nr0_A 253 KIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSS 332 (611)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred EEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEE
Confidence 999999999999999998765433211 01245567889999
Q ss_pred CCCCCccCC-CCCcceEEEeCCc----------cceeeEEEeeCCCC
Q 015438 371 PPQARDLKH-PCDQSVATYKGHS----------VLRTLIRCHFSPVY 406 (407)
Q Consensus 371 ~~~~~~l~~-~~~~~v~~~~gh~----------~~~~~~~~~fsp~~ 406 (407)
+|++++|++ +.|+.|++|+-.+ ....+..+.|+|+.
T Consensus 333 spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~ 379 (611)
T 1nr0_A 333 SADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKG 379 (611)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTS
T ss_pred eCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCC
Confidence 999977765 4689999997322 11256777887764
No 20
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-37 Score=278.57 Aligned_cols=271 Identities=15% Similarity=0.182 Sum_probs=206.2
Q ss_pred cccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCe-EEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEE
Q 015438 118 WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGW-KIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (407)
Q Consensus 118 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vw 196 (407)
..+.+|.+.|++++|+|+ +||+|+.|+.|++||+..+. ..........|...|.+++|+|++++|++++.|+.|++|
T Consensus 8 ~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw 85 (330)
T 2hes_X 8 KSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIW 85 (330)
T ss_dssp EEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 457799999999999987 99999999999999998753 222212123388899999999999999999999999999
Q ss_pred ECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCC----CeeeeeeeccCCCe
Q 015438 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA----NKLSLRILAHTSDV 272 (407)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~~v 272 (407)
|+........ ... ......+|...|.+++|+|++++|++|+.|++|++||++. .+++..+.+|...|
T Consensus 86 ~~~~~~~~~~-~~~--------~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v 156 (330)
T 2hes_X 86 AKEESADRTF-EMD--------LLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDV 156 (330)
T ss_dssp EC-------C-CCE--------EEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCE
T ss_pred EcccCcCccc-cce--------eEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCce
Confidence 9864321000 000 0001235788999999999999999999999999999943 25667788999999
Q ss_pred EEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCC--ceeeeeccccCCeEEEEecCC--CCEEEEEeCCCcEEEEECCCC
Q 015438 273 NTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKG--KPAGVLMGHLEGITFIDSRGD--GRYLISNGKDQAIKLWDIRKM 348 (407)
Q Consensus 273 ~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~--~~~~~~~~~~~~i~~~~~s~~--~~~l~s~~~dg~i~iwd~~~~ 348 (407)
.+++|+ +++++|++++.|++|++||.+ .+ +++..+.+|...|.+++|+|+ +.+|++++.|++|++||++..
T Consensus 157 ~~v~~~-p~~~~l~s~s~D~~i~iW~~~----~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 157 KHVIWH-PSEALLASSSYDDTVRIWKDY----DDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp EEEEEC-SSSSEEEEEETTSCEEEEEEE----TTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred EEEEEC-CCCCEEEEEcCCCeEEEEECC----CCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 999998 789999999999999999986 44 678889999999999999998 778999999999999999865
Q ss_pred CCcc----cccCCC-ccccccceeeeCCCCCCccCCCCCcceEEEeCCcc------------ce-eeEEEeeCC
Q 015438 349 SSNA----SCNLGF-RSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSV------------LR-TLIRCHFSP 404 (407)
Q Consensus 349 ~~~~----~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~gh~~------------~~-~~~~~~fsp 404 (407)
.... .+.... ..+...+..++|++++.+++++.|+.|++|+.... .. .+..+.|+|
T Consensus 232 ~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~ 305 (330)
T 2hes_X 232 DEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLE 305 (330)
T ss_dssp CTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-
T ss_pred CccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEec
Confidence 3211 111111 22566788999998888888888999999963210 11 467788988
No 21
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.7e-36 Score=275.52 Aligned_cols=284 Identities=20% Similarity=0.281 Sum_probs=229.3
Q ss_pred chhhhccCccCcc-----CCCcee---ccccccceeeeeccCCCCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEE
Q 015438 81 STVKMLAGREGNY-----SGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYD 152 (407)
Q Consensus 81 ~~~~~~~~~~~~~-----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd 152 (407)
.....+.+|...+ +..+++ ...|....+|+..+.+....+..|...|.+++|+|+|.+|++|+.|+.+++|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 3445566665543 222222 33455667887777777778888999999999999999999999999999999
Q ss_pred cCCCeE---EeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCcccc
Q 015438 153 VERGWK---IQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFG 229 (407)
Q Consensus 153 ~~~~~~---~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (407)
+..... .........|...|.++.|+|++..|++++.|++|++||+++++....+. +|...
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~----------------~h~~~ 198 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH----------------GHGAD 198 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE----------------CCSSC
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc----------------CCCCC
Confidence 864311 01112234577789999999999999999999999999999887644332 46678
Q ss_pred EEEEEEeC--CCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCc
Q 015438 230 IFSLKFST--DGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGK 307 (407)
Q Consensus 230 v~~~~~s~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~ 307 (407)
|.+++|+| ++++|++|+.||.|++||+++++++..+..|...|.+++|+ +++++|++|+.|++|++||++ ...
T Consensus 199 v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~-p~~~~l~s~s~D~~v~lwd~~----~~~ 273 (354)
T 2pbi_B 199 VLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYY-PSGDAFASGSDDATCRLYDLR----ADR 273 (354)
T ss_dssp EEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETT----TTE
T ss_pred eEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEe-CCCCEEEEEeCCCeEEEEECC----CCc
Confidence 99999988 56899999999999999999999999999999999999998 788999999999999999998 666
Q ss_pred eeeeeccc--cCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCCC-CCcc
Q 015438 308 PAGVLMGH--LEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHP-CDQS 384 (407)
Q Consensus 308 ~~~~~~~~--~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~ 384 (407)
.+..+..+ ...+++++|+|++++|++|+.|+.|++||+.+++.+.. ...+...|..++|+|++++|+++ .|+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~----l~~h~~~v~~l~~spdg~~l~sgs~D~~ 349 (354)
T 2pbi_B 274 EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSI----LFGHENRVSTLRVSPDGTAFCSGSWDHT 349 (354)
T ss_dssp EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEE----ECCCSSCEEEEEECTTSSCEEEEETTSE
T ss_pred EEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEE----EECCCCcEEEEEECCCCCEEEEEcCCCC
Confidence 66555433 45789999999999999999999999999998876544 33566789999999999877654 6888
Q ss_pred eEEEe
Q 015438 385 VATYK 389 (407)
Q Consensus 385 v~~~~ 389 (407)
|++|+
T Consensus 350 v~vW~ 354 (354)
T 2pbi_B 350 LRVWA 354 (354)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 99884
No 22
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.1e-36 Score=296.13 Aligned_cols=298 Identities=15% Similarity=0.176 Sum_probs=225.4
Q ss_pred ccccceeeeeccCCCCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeee----ccccceEEEEEEE
Q 015438 102 ADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDIL----AKSLRWTVTDTSL 177 (407)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~~~~~~~v~~~~~ 177 (407)
.+....+|...+.+....+.+|...|.+++|+|+|++||+|+.|+.|++||+.++........ ...|...|.+++|
T Consensus 168 ~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~ 247 (611)
T 1nr0_A 168 DDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTW 247 (611)
T ss_dssp TTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEE
T ss_pred CCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEE
Confidence 344555666555555567889999999999999999999999999999999988866544311 1168889999999
Q ss_pred CCCCCeEEEEeCCCeEEEEECCCCceeccccccccccc--------------------eee-------eecCCCCccccE
Q 015438 178 SPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDG--------------------LDF-------SAADDGGYSFGI 230 (407)
Q Consensus 178 sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~--------------------~~~-------~~~~~~~~~~~v 230 (407)
+|++++|++++.|++|++||+.+++............. +.+ ......+|...|
T Consensus 248 spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v 327 (611)
T 1nr0_A 248 SPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAI 327 (611)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCE
Confidence 99999999999999999999998776543321100000 000 001124688899
Q ss_pred EEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeee-e-------------------------------------------
Q 015438 231 FSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRI-L------------------------------------------- 266 (407)
Q Consensus 231 ~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~------------------------------------------- 266 (407)
.+++|+|+|++|++++.|++|++||+.+++....+ .
T Consensus 328 ~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~ 407 (611)
T 1nr0_A 328 TALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVA 407 (611)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCE
T ss_pred EEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceee
Confidence 99999999999999999999999999876543221 0
Q ss_pred --------------------------------------ccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCce
Q 015438 267 --------------------------------------AHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKP 308 (407)
Q Consensus 267 --------------------------------------~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 308 (407)
.|...+.+++|+ +++++|++|+.|+.|++||+. .+..
T Consensus 408 ~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~s-pdg~~lasgs~D~~v~lwd~~----~~~~ 482 (611)
T 1nr0_A 408 NKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALS-NDKQFVAVGGQDSKVHVYKLS----GASV 482 (611)
T ss_dssp EECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEEC-TTSCEEEEEETTSEEEEEEEE----TTEE
T ss_pred eecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEe-CCCCEEEEeCCCCeEEEEEcc----CCce
Confidence 122446788998 789999999999999999996 3322
Q ss_pred --eeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCC-CCCcccccCCCccccccceeeeCCCCCCccCC-CCCcc
Q 015438 309 --AGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRK-MSSNASCNLGFRSYEWDYRWMDYPPQARDLKH-PCDQS 384 (407)
Q Consensus 309 --~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~ 384 (407)
+.. .+|...|++++|+|+|++|++++.|++|++||+.+ ++..... ....+...|.+++|+|++++|++ +.|+.
T Consensus 483 ~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~--~~~~H~~~V~~v~fspdg~~lasgs~D~~ 559 (611)
T 1nr0_A 483 SEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTN--SWTFHTAKVACVSWSPDNVRLATGSLDNS 559 (611)
T ss_dssp EEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCC--CCCCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeee--eeeecccceeEEEECCCCCEEEEEECCCc
Confidence 233 67999999999999999999999999999999987 4332221 12336678999999999987765 46888
Q ss_pred eEEEeCCcc------------ceeeEEEeeCCCCC
Q 015438 385 VATYKGHSV------------LRTLIRCHFSPVYR 407 (407)
Q Consensus 385 v~~~~gh~~------------~~~~~~~~fsp~~~ 407 (407)
|++|+-... ...+..+.|+||.+
T Consensus 560 v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~ 594 (611)
T 1nr0_A 560 VIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT 594 (611)
T ss_dssp EEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE
T ss_pred EEEEECCCcccccchhhccCcccCeeEEEEcCCCE
Confidence 999873210 23578899999863
No 23
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.3e-36 Score=277.79 Aligned_cols=247 Identities=13% Similarity=0.075 Sum_probs=201.4
Q ss_pred cccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEe-eeccccceEEEEEEECCCCCeEEEEeCCCeEEEEEC
Q 015438 120 VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKD-ILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV 198 (407)
Q Consensus 120 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~ 198 (407)
..+|...|.+++|+|++. +++++.||.|+|||+.++...... ....+|...|++++|+|++++|++++.|+.|++||+
T Consensus 90 ~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~ 168 (357)
T 4g56_B 90 GVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDL 168 (357)
T ss_dssp EEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred cCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 357899999999999986 456778999999999887543322 234568889999999999999999999999999999
Q ss_pred CCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCC-EEEEeeCCCeEEEEEcCCCeeeeeee--ccCCCeEEE
Q 015438 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR-ELVAGSSDDCIYVYDLEANKLSLRIL--AHTSDVNTV 275 (407)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~i 275 (407)
++++....+. +|...|.+++|+|++. ++++++.|+.|++||+++++++..+. .+...+.++
T Consensus 169 ~~~~~~~~~~----------------~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v 232 (357)
T 4g56_B 169 SQKAVLKSYN----------------AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSV 232 (357)
T ss_dssp TTTEEEEEEC----------------CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEE
T ss_pred CCCcEEEEEc----------------CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccch
Confidence 9887654332 4677899999999875 78999999999999999988766543 567789999
Q ss_pred EecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCC-CEEEEEeCCCcEEEEECCCCCCcccc
Q 015438 276 CFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDG-RYLISNGKDQAIKLWDIRKMSSNASC 354 (407)
Q Consensus 276 ~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~ 354 (407)
+|+|..+.+|++|+.|+.|++||++ .++++..+.+|...|++++|+|++ ++|++|+.|++|+|||+++++.....
T Consensus 233 ~~sp~~~~~la~g~~d~~i~~wd~~----~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~ 308 (357)
T 4g56_B 233 TWHPEKDDTFACGDETGNVSLVNIK----NPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL 308 (357)
T ss_dssp EECTTSTTEEEEEESSSCEEEEESS----CGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC
T ss_pred hhhhcccceEEEeecccceeEEECC----CCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC
Confidence 9997778899999999999999998 788899999999999999999987 68999999999999999987665432
Q ss_pred cCCCccccccceeeeCCC-CCCcc-CCCCCcceEEEeCCc
Q 015438 355 NLGFRSYEWDYRWMDYPP-QARDL-KHPCDQSVATYKGHS 392 (407)
Q Consensus 355 ~~~~~~~~~~v~~~~~~~-~~~~l-~~~~~~~v~~~~gh~ 392 (407)
.+...|+.++|+| ++.+| +++.|+.|++|+-.+
T Consensus 309 -----~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 309 -----SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp -----CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred -----CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 4566789999998 67665 456899999998654
No 24
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1e-36 Score=273.91 Aligned_cols=258 Identities=19% Similarity=0.142 Sum_probs=199.3
Q ss_pred cccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECC--CCCeEEEEeCCCeEEE
Q 015438 118 WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP--DQRHLVYASMSPIVHI 195 (407)
Q Consensus 118 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp--~~~~l~~~~~dg~i~v 195 (407)
..+.+|.+.|++++|+|+|++||+|+.|+.|+|||+.++... ......+|...|.+++|+| ++++|++++.|++|++
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~-~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQI-LIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEE-EEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcE-EEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 356789999999999999999999999999999999876432 2234567888999999986 4899999999999999
Q ss_pred EECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCC--CCEEEEeeCCCeEEEEEcCCCee---eeeeeccCC
Q 015438 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD--GRELVAGSSDDCIYVYDLEANKL---SLRILAHTS 270 (407)
Q Consensus 196 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~ 270 (407)
||++++....... ..+|...|.+++|+|+ +.+|++|+.|+.|++||++.+.. ...+..|..
T Consensus 86 Wd~~~~~~~~~~~--------------~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~ 151 (316)
T 3bg1_A 86 WREENGTWEKSHE--------------HAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTI 151 (316)
T ss_dssp ECCSSSCCCEEEE--------------ECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSS
T ss_pred EECCCCcceEEEE--------------ccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccC
Confidence 9998764322111 1247778999999998 78999999999999999987632 345568899
Q ss_pred CeEEEEecCCC----------------CCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCC----CE
Q 015438 271 DVNTVCFGDES----------------GHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDG----RY 330 (407)
Q Consensus 271 ~v~~i~~s~~~----------------~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~----~~ 330 (407)
.|.+++|+|.. +++|++|+.|+.|++||++... ..+++..+.+|...|.+++|+|++ .+
T Consensus 152 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~-~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~ 230 (316)
T 3bg1_A 152 GCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDG-QWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230 (316)
T ss_dssp CBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTS-CEEEEECCBCCSSCEEEEECCCCSSCSCCE
T ss_pred CcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCC-ccceeeecccCCCceEEEEecCCCCCCCce
Confidence 99999998532 4789999999999999996110 114677888999999999999986 89
Q ss_pred EEEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCC-CCCcceEEEeCC
Q 015438 331 LISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKH-PCDQSVATYKGH 391 (407)
Q Consensus 331 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~v~~~~gh 391 (407)
|++++.|++|++||+++.............+...+..++|+|++++|++ +.|+.|++|+..
T Consensus 231 las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 231 IASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred EEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 9999999999999998742211000112334567889999999988765 578999999854
No 25
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.1e-36 Score=271.82 Aligned_cols=276 Identities=17% Similarity=0.102 Sum_probs=214.1
Q ss_pred cccceeeeeccCCC---CcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECC
Q 015438 103 DCCHMLSRYLPVNG---PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (407)
Q Consensus 103 ~~~~~~~~~~~~~~---~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp 179 (407)
+....+|+...... .....+|...|.+++|+|+|++|++|+.|+.|+||++..+.. .......+|...|.+++|+|
T Consensus 37 D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~-~~~~~~~~h~~~v~~v~~sp 115 (345)
T 3fm0_A 37 DRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDF-ECVTTLEGHENEVKSVAWAP 115 (345)
T ss_dssp TSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-E-EEEEEECCCSSCEEEEEECT
T ss_pred CCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCe-EEEEEccCCCCCceEEEEeC
Confidence 44455555433321 123368999999999999999999999999999999887632 22334567888999999999
Q ss_pred CCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCC
Q 015438 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259 (407)
Q Consensus 180 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~ 259 (407)
++++|++++.|+.|++||+..+........ ..+|...|.+++|+|++++|++|+.|+.|++||++++
T Consensus 116 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-------------~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~ 182 (345)
T 3fm0_A 116 SGNLLATCSRDKSVWVWEVDEEDEYECVSV-------------LNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEED 182 (345)
T ss_dssp TSSEEEEEETTSCEEEEEECTTSCEEEEEE-------------ECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETT
T ss_pred CCCEEEEEECCCeEEEEECCCCCCeEEEEE-------------ecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCC
Confidence 999999999999999999987643221111 1246678999999999999999999999999999887
Q ss_pred e--eeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCC-----------CCceeeeecc-ccCCeEEEEec
Q 015438 260 K--LSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNV-----------KGKPAGVLMG-HLEGITFIDSR 325 (407)
Q Consensus 260 ~--~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~-----------~~~~~~~~~~-~~~~i~~~~~s 325 (407)
+ +...+.+|...|.+++|+ +++++|++++.|++|++||...... ..+++..+.+ |...|.+++|+
T Consensus 183 ~~~~~~~~~~h~~~v~~l~~s-p~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~ 261 (345)
T 3fm0_A 183 DWVCCATLEGHESTVWSLAFD-PSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWC 261 (345)
T ss_dssp EEEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEEC
T ss_pred CEEEEEEecCCCCceEEEEEC-CCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEe
Confidence 5 446788999999999998 7899999999999999999742110 1123344544 88899999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCCCccccc-----CCCccccccceeeeCCCCCC-cc-CCCCCcceEEEeCCcc
Q 015438 326 GDGRYLISNGKDQAIKLWDIRKMSSNASCN-----LGFRSYEWDYRWMDYPPQAR-DL-KHPCDQSVATYKGHSV 393 (407)
Q Consensus 326 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~-~l-~~~~~~~v~~~~gh~~ 393 (407)
|++..|++++.|+.|++|++.......... .....+...|.+++|+|++. +| +++.|+.|++|+....
T Consensus 262 ~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~ 336 (345)
T 3fm0_A 262 QLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRP 336 (345)
T ss_dssp TTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-
T ss_pred cCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCC
Confidence 999999999999999999998754322110 11235667899999999873 55 4567999999987653
No 26
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-35 Score=275.21 Aligned_cols=259 Identities=22% Similarity=0.372 Sum_probs=205.0
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeecc---------------ccceEEEEEEECCCCCeEEE
Q 015438 122 QTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK---------------SLRWTVTDTSLSPDQRHLVY 186 (407)
Q Consensus 122 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---------------~~~~~v~~~~~sp~~~~l~~ 186 (407)
+|.+.|.+++|+|+|++||+|+ ++.++||++.++..+....... .+...|.+++|+|++++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6999999999999999999986 6899999999886554432111 12224999999999999999
Q ss_pred EeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeee
Q 015438 187 ASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL 266 (407)
Q Consensus 187 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 266 (407)
|+.|+.|++||+.+++....+. +|...|.+++|+|++++|++++.|++|++||+++++....+.
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~----------------~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 204 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQ----------------GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS 204 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEEC----------------CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EcCCCeEEEEECCCCcEEEEEc----------------cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE
Confidence 9999999999999876543321 477789999999999999999999999999999999877774
Q ss_pred ccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeee-------ccccCCeEEEEecCCCCEEEEEeCCCc
Q 015438 267 AHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVL-------MGHLEGITFIDSRGDGRYLISNGKDQA 339 (407)
Q Consensus 267 ~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-------~~~~~~i~~~~~s~~~~~l~s~~~dg~ 339 (407)
+...+.+++|+|.++++|++|+.|+.|++||++ .+..+..+ .+|...|++++|+|+|++|++|+.|+.
T Consensus 205 -~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~----~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~ 279 (393)
T 1erj_A 205 -IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSE----TGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS 279 (393)
T ss_dssp -CSSCEEEEEECSTTCCEEEEEETTSCEEEEETT----TCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred -cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECC----CCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 567899999997699999999999999999998 66666655 578999999999999999999999999
Q ss_pred EEEEECCCCCCcccc--------cCCCccccccceeeeCCCCCCccCC-CCCcceEEEe-----------CCccceeeEE
Q 015438 340 IKLWDIRKMSSNASC--------NLGFRSYEWDYRWMDYPPQARDLKH-PCDQSVATYK-----------GHSVLRTLIR 399 (407)
Q Consensus 340 i~iwd~~~~~~~~~~--------~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~v~~~~-----------gh~~~~~~~~ 399 (407)
|++||+++....... ......+...+..++|+|++++|++ +.|+.|++|+ ||.. .+..
T Consensus 280 v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~--~v~~ 357 (393)
T 1erj_A 280 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRN--SVIS 357 (393)
T ss_dssp EEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSS--CEEE
T ss_pred EEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCC--CEEE
Confidence 999999875432211 1112234556788999999877654 4577777775 5554 5777
Q ss_pred EeeCC
Q 015438 400 CHFSP 404 (407)
Q Consensus 400 ~~fsp 404 (407)
+.|+|
T Consensus 358 v~~~~ 362 (393)
T 1erj_A 358 VAVAN 362 (393)
T ss_dssp EEECS
T ss_pred EEecC
Confidence 77776
No 27
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4e-35 Score=270.73 Aligned_cols=271 Identities=15% Similarity=0.180 Sum_probs=215.9
Q ss_pred cccccCCCceEEEEECCCC-CEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECC-CCCeEEEEeCCCeEEE
Q 015438 118 WPVDQTTSRAYVSQFSADG-SLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP-DQRHLVYASMSPIVHI 195 (407)
Q Consensus 118 ~~~~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~dg~i~v 195 (407)
..+.+|...|.+++|+|++ ++|++|+.||.|+|||+.++..... ....+|...|.+++|+| ++++|++++.|+.|++
T Consensus 67 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 145 (383)
T 3ei3_B 67 RTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSF-IQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTL 145 (383)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEE-ECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEE
T ss_pred EeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCccccee-eecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEE
Confidence 3567899999999999999 9999999999999999997754433 23346888999999999 7899999999999999
Q ss_pred EECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEE
Q 015438 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTV 275 (407)
Q Consensus 196 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i 275 (407)
||+.+........ ..++...|.+++|+|++++|++|+.|+.|++||+ +++.+..+..|...|.++
T Consensus 146 wd~~~~~~~~~~~--------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~ 210 (383)
T 3ei3_B 146 RDFSGSVIQVFAK--------------TDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHA 210 (383)
T ss_dssp EETTSCEEEEEEC--------------CCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEE
T ss_pred EECCCCceEEEec--------------cCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEE
Confidence 9998643222111 1134568999999999999999999999999999 577888899999999999
Q ss_pred EecCCCCC-EEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecC-CCCEEEEEeCCCcEEEEECCCCCCccc
Q 015438 276 CFGDESGH-LIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRG-DGRYLISNGKDQAIKLWDIRKMSSNAS 353 (407)
Q Consensus 276 ~~s~~~~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~ 353 (407)
+|+ +++. +|++++.|+.|++||++........+..+ +|...|++++|+| ++++|++++.|+.|++||+++++....
T Consensus 211 ~~~-~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 288 (383)
T 3ei3_B 211 EFN-PRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQ 288 (383)
T ss_dssp EEC-SSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSE
T ss_pred EEC-CCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccc
Confidence 998 5566 99999999999999998433335666666 6999999999999 999999999999999999999887655
Q ss_pred ccCCC---cc----------ccccceeeeCCCCCCccCCCCCcceEEEeCCcc----------ceeeEE-EeeCCCCC
Q 015438 354 CNLGF---RS----------YEWDYRWMDYPPQARDLKHPCDQSVATYKGHSV----------LRTLIR-CHFSPVYR 407 (407)
Q Consensus 354 ~~~~~---~~----------~~~~v~~~~~~~~~~~l~~~~~~~v~~~~gh~~----------~~~~~~-~~fsp~~~ 407 (407)
+.... .. ....+..+.|+|++++ +.+.|+.|++|+-.+. ...++. +.|+|+.+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~ 365 (383)
T 3ei3_B 289 IIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGD 365 (383)
T ss_dssp EEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSS
T ss_pred cccccccccccccceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCcc
Confidence 43110 00 0123445889999999 8888999999984321 122333 48999864
No 28
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.7e-35 Score=274.12 Aligned_cols=242 Identities=22% Similarity=0.311 Sum_probs=199.3
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCcee
Q 015438 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTME 204 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~ 204 (407)
..|.+++|+|+|++|++|+.|+.|+|||+.++..+. ...+|...|.+++|+|++++|++++.|+.|++||+.+++..
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~---~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVM---ILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS 200 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE---EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE---EEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE
Confidence 359999999999999999999999999999885443 35678888999999999999999999999999999988654
Q ss_pred ccccccccccceeeeecCCCCccccEEEEEEeC-CCCEEEEeeCCCeEEEEEcCCCeeeeee-------eccCCCeEEEE
Q 015438 205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSDDCIYVYDLEANKLSLRI-------LAHTSDVNTVC 276 (407)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~-------~~~~~~v~~i~ 276 (407)
.... +...+.+++|+| ++++|++|+.|+.|++||+++++.+..+ .+|...|.+++
T Consensus 201 ~~~~-----------------~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 263 (393)
T 1erj_A 201 LTLS-----------------IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVV 263 (393)
T ss_dssp EEEE-----------------CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEE
T ss_pred EEEE-----------------cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEE
Confidence 3332 223689999999 8999999999999999999998877766 57899999999
Q ss_pred ecCCCCCEEEEEeCCCcEEEEeCcccCC--------CCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 015438 277 FGDESGHLIYSGSDDNLCKVWDRRCLNV--------KGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKM 348 (407)
Q Consensus 277 ~s~~~~~~l~s~~~d~~i~vwd~~~~~~--------~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 348 (407)
|+ +++++|++|+.|+.|++||++.... .+.+...+.+|...|.+++|+|++.+|++|+.|+.|++||++++
T Consensus 264 ~~-~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~ 342 (393)
T 1erj_A 264 FT-RDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG 342 (393)
T ss_dssp EC-TTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC
T ss_pred EC-CCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence 98 7899999999999999999973210 23455678899999999999999999999999999999999998
Q ss_pred CCcccccCCCccccccceeeeCCC------CCCccC-CCCCcceEEEeCC
Q 015438 349 SSNASCNLGFRSYEWDYRWMDYPP------QARDLK-HPCDQSVATYKGH 391 (407)
Q Consensus 349 ~~~~~~~~~~~~~~~~v~~~~~~~------~~~~l~-~~~~~~v~~~~gh 391 (407)
+.+..+ ..+...+..++|++ ++.+|+ ++.|+.|++|+-.
T Consensus 343 ~~~~~l----~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 343 NPLLML----QGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp CEEEEE----ECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred eEEEEE----CCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence 766543 33445566666654 565554 5578999999753
No 29
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.6e-35 Score=264.23 Aligned_cols=262 Identities=13% Similarity=0.176 Sum_probs=213.8
Q ss_pred ccccceeeeeccCC-----CCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEE
Q 015438 102 ADCCHMLSRYLPVN-----GPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTS 176 (407)
Q Consensus 102 ~~~~~~~~~~~~~~-----~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~ 176 (407)
.|....+|...... ....+.+|...|.+++|+|++++|++|+.|+.|+|||+.+++.+.. ..+|...|.+++
T Consensus 38 ~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~---~~~h~~~v~~~~ 114 (319)
T 3frx_A 38 RDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQR---FVGHKSDVMSVD 114 (319)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE---EECCSSCEEEEE
T ss_pred CCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEE---EccCCCcEEEEE
Confidence 34455566553221 2346789999999999999999999999999999999999865543 456888899999
Q ss_pred ECCCCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCC------CCEEEEeeCCCe
Q 015438 177 LSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD------GRELVAGSSDDC 250 (407)
Q Consensus 177 ~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~------~~~l~~~~~dg~ 250 (407)
|+|++.+|++++.|+.|++||++....... .+|...|.++.|+|. +..|++++.|+.
T Consensus 115 ~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~-----------------~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~ 177 (319)
T 3frx_A 115 IDKKASMIISGSRDKTIKVWTIKGQCLATL-----------------LGHNDWVSQVRVVPNEKADDDSVTIISAGNDKM 177 (319)
T ss_dssp ECTTSCEEEEEETTSCEEEEETTSCEEEEE-----------------CCCSSCEEEEEECCC------CCEEEEEETTSC
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCeEEEE-----------------eccCCcEEEEEEccCCCCCCCccEEEEEeCCCE
Confidence 999999999999999999999974422111 146678999999985 448999999999
Q ss_pred EEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCE
Q 015438 251 IYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRY 330 (407)
Q Consensus 251 i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 330 (407)
|++||+++.+....+.+|...|.+++|+ +++++|++|+.|+.|++||++ .++++..+..+ ..|.+++|+|++.+
T Consensus 178 i~~wd~~~~~~~~~~~~h~~~v~~~~~s-p~g~~l~s~~~dg~i~iwd~~----~~~~~~~~~~~-~~v~~~~~sp~~~~ 251 (319)
T 3frx_A 178 VKAWNLNQFQIEADFIGHNSNINTLTAS-PDGTLIASAGKDGEIMLWNLA----AKKAMYTLSAQ-DEVFSLAFSPNRYW 251 (319)
T ss_dssp EEEEETTTTEEEEEECCCCSCEEEEEEC-TTSSEEEEEETTCEEEEEETT----TTEEEEEEECC-SCEEEEEECSSSSE
T ss_pred EEEEECCcchhheeecCCCCcEEEEEEc-CCCCEEEEEeCCCeEEEEECC----CCcEEEEecCC-CcEEEEEEcCCCCE
Confidence 9999999999988999999999999998 789999999999999999998 77888887754 68999999999999
Q ss_pred EEEEeCCCcEEEEECCCCCCcccccCC----CccccccceeeeCCCCCCccCC-CCCcceEEEeC
Q 015438 331 LISNGKDQAIKLWDIRKMSSNASCNLG----FRSYEWDYRWMDYPPQARDLKH-PCDQSVATYKG 390 (407)
Q Consensus 331 l~s~~~dg~i~iwd~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~-~~~~~v~~~~g 390 (407)
|++++. +.+++|++............ ...+...+..++|+|++++|++ +.|+.|++|+-
T Consensus 252 la~~~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~ 315 (319)
T 3frx_A 252 LAAATA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQV 315 (319)
T ss_dssp EEEEET-TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred EEEEcC-CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEE
Confidence 998875 55999999876544433221 2233455778999999988765 46899999974
No 30
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.2e-35 Score=295.14 Aligned_cols=248 Identities=20% Similarity=0.227 Sum_probs=209.5
Q ss_pred ccccCCCceEEEEECCCC-CEEEEEeCCCeEEEEEcCCCeEE--eEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEE
Q 015438 119 PVDQTTSRAYVSQFSADG-SLFVAGFQASQIRIYDVERGWKI--QKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHI 195 (407)
Q Consensus 119 ~~~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~v 195 (407)
.+.+|.+.|++++|+|++ ++|++|+.|+.|+||++.+.... .......+|...|.+++|+|++++|++|+.|+.|+|
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~v 456 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 456 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEE
Confidence 578999999999999875 78999999999999999764211 122245678889999999999999999999999999
Q ss_pred EECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeee---eccCCCe
Q 015438 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRI---LAHTSDV 272 (407)
Q Consensus 196 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~~v 272 (407)
||+.++.....+. +|...|.+++|+|++++|++|+.|++|++||+......... .+|...|
T Consensus 457 wd~~~~~~~~~~~----------------~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v 520 (694)
T 3dm0_A 457 WDLAAGVSTRRFV----------------GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWV 520 (694)
T ss_dssp EETTTTEEEEEEE----------------CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCE
T ss_pred EECCCCcceeEEe----------------CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcE
Confidence 9999876543321 47779999999999999999999999999998755433222 3688899
Q ss_pred EEEEecCCC-CCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCc
Q 015438 273 NTVCFGDES-GHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSN 351 (407)
Q Consensus 273 ~~i~~s~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 351 (407)
.+++|+|.. ..+|++++.|+.|++||++ ..+....+.+|...|++++|+|++++|++|+.||.|++||+++++.+
T Consensus 521 ~~~~~~~~~~~~~l~s~s~d~~v~vwd~~----~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~ 596 (694)
T 3dm0_A 521 SCVRFSPNTLQPTIVSASWDKTVKVWNLS----NCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKL 596 (694)
T ss_dssp EEEEECSCSSSCEEEEEETTSCEEEEETT----TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEE
T ss_pred EEEEEeCCCCcceEEEEeCCCeEEEEECC----CCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 999998543 3689999999999999998 78888899999999999999999999999999999999999998776
Q ss_pred ccccCCCccccccceeeeCCCCCCccCCCCCcceEEEeCC
Q 015438 352 ASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGH 391 (407)
Q Consensus 352 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~gh 391 (407)
..+. ....+..+.|+|++.+++++.++.|++|+-.
T Consensus 597 ~~~~-----~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~ 631 (694)
T 3dm0_A 597 YSLE-----ANSVIHALCFSPNRYWLCAATEHGIKIWDLE 631 (694)
T ss_dssp ECCB-----CSSCEEEEEECSSSSEEEEEETTEEEEEETT
T ss_pred EEec-----CCCcEEEEEEcCCCcEEEEEcCCCEEEEECC
Confidence 5442 2345889999999999999999889999754
No 31
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4.3e-35 Score=265.68 Aligned_cols=264 Identities=19% Similarity=0.205 Sum_probs=219.7
Q ss_pred ccccCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCCeEE--eEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEE
Q 015438 119 PVDQTTSRAYVSQFSAD-GSLFVAGFQASQIRIYDVERGWKI--QKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHI 195 (407)
Q Consensus 119 ~~~~h~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~v 195 (407)
+|.+|.+.|++|+|+|+ +++||+|+.|++|+|||+.+.... .......+|...|.+++|+|++++|++++.|+.|++
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~ 112 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRL 112 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceE
Confidence 57899999999999997 689999999999999999765321 122345678889999999999999999999999999
Q ss_pred EECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCee-eeeeeccCCCeEE
Q 015438 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL-SLRILAHTSDVNT 274 (407)
Q Consensus 196 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~v~~ 274 (407)
|+........... .+...+..+.+++++.+|++++.|+.+++||+..... ...+..|...+..
T Consensus 113 ~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~ 176 (340)
T 4aow_A 113 WDLTTGTTTRRFV----------------GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSC 176 (340)
T ss_dssp EETTTTEEEEEEE----------------CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEE
T ss_pred Eeecccceeeeec----------------CCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccc
Confidence 9998776543322 1333678899999999999999999999999986654 3445678999999
Q ss_pred EEecCCC-CCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCccc
Q 015438 275 VCFGDES-GHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNAS 353 (407)
Q Consensus 275 i~~s~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 353 (407)
++|++.. ..++++++.|+.|++||++ .++.+..+.+|...|++++|+|++++|++|+.||.|++||+++.+.+..
T Consensus 177 ~~~~~~~~~~~~~s~~~d~~i~i~d~~----~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~ 252 (340)
T 4aow_A 177 VRFSPNSSNPIIVSCGWDKLVKVWNLA----NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT 252 (340)
T ss_dssp EEECSCSSSCEEEEEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEccCCCCcEEEEEcCCCEEEEEECC----CCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeee
Confidence 9998443 4578899999999999998 8888999999999999999999999999999999999999999877654
Q ss_pred ccCCCccccccceeeeCCCCCCccCCCCCcceEEEeCCc------------------cceeeEEEeeCCCCC
Q 015438 354 CNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHS------------------VLRTLIRCHFSPVYR 407 (407)
Q Consensus 354 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~gh~------------------~~~~~~~~~fsp~~~ 407 (407)
+. ....+..+.|+|++.+++++.|+.|++|+-.+ ....+..++|+||++
T Consensus 253 ~~-----~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~ 319 (340)
T 4aow_A 253 LD-----GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQ 319 (340)
T ss_dssp EE-----CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSS
T ss_pred ec-----CCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCC
Confidence 42 23467889999999999999999999997432 123578899999874
No 32
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2e-35 Score=277.48 Aligned_cols=272 Identities=14% Similarity=0.163 Sum_probs=205.3
Q ss_pred ccccCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECC-CCCeEEEEeCCCeEEEE
Q 015438 119 PVDQTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP-DQRHLVYASMSPIVHIV 196 (407)
Q Consensus 119 ~~~~h~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~dg~i~vw 196 (407)
....|...|+||+|+| ++++||+|+.||.|+|||+.++... ......+|...|++++|+| ++++|++++.||+|++|
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~-~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP-TFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC-EEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce-eEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 4467889999999999 5678999999999999999876433 2334567888999999998 68899999999999999
Q ss_pred ECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEE
Q 015438 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVC 276 (407)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~ 276 (407)
|++++........ ..+...+.+++|+|++++|++|+.||.|++||++ ++.+..+.+|...|.+++
T Consensus 193 d~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~ 257 (435)
T 4e54_B 193 DFKGNILRVFASS--------------DTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVA 257 (435)
T ss_dssp ETTSCEEEEEECC--------------SSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEE
T ss_pred eccCCceeEEecc--------------CCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeee
Confidence 9986644322211 1233467889999999999999999999999997 456677889999999999
Q ss_pred ecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccC
Q 015438 277 FGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNL 356 (407)
Q Consensus 277 ~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 356 (407)
|+|....+|++|+.|+.|++||++.... ...+....+|...|++++|+|+|++|++++.||.|+|||+++++.......
T Consensus 258 ~~p~~~~~~~s~s~d~~v~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~ 336 (435)
T 4e54_B 258 LNPCCDWFLATASVDQTVKIWDLRQVRG-KASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIP 336 (435)
T ss_dssp ECTTCSSEEEEEETTSBCCEEETTTCCS-SSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECC
T ss_pred ecCCCceEEEEecCcceeeEEecccccc-cceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEec
Confidence 9966667899999999999999984321 122334467999999999999999999999999999999998876554321
Q ss_pred CCc-------------cccccceeeeCCCCCCccCC--CCCcceEEEeCCccc----------eeeEEE-eeCCCCC
Q 015438 357 GFR-------------SYEWDYRWMDYPPQARDLKH--PCDQSVATYKGHSVL----------RTLIRC-HFSPVYR 407 (407)
Q Consensus 357 ~~~-------------~~~~~v~~~~~~~~~~~l~~--~~~~~v~~~~gh~~~----------~~~~~~-~fsp~~~ 407 (407)
... .....+..+.+++++.++.. ..++.|++|+.++.. ..+..+ .|||+++
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~ 413 (435)
T 4e54_B 337 HPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGD 413 (435)
T ss_dssp CCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSS
T ss_pred ccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCC
Confidence 110 01122334556666654443 345678898866421 123333 5999864
No 33
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.8e-36 Score=279.41 Aligned_cols=274 Identities=18% Similarity=0.227 Sum_probs=225.5
Q ss_pred ccccceeeeeccCCCCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeE----EeEeeeccccceEEEEEEE
Q 015438 102 ADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWK----IQKDILAKSLRWTVTDTSL 177 (407)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~~v~~~~~ 177 (407)
.|....+|+....+....+..|...|.+++|+|+|++|++|+.|+.|+||++.+... ........+|...|.++.|
T Consensus 86 ~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~ 165 (380)
T 3iz6_a 86 QDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQY 165 (380)
T ss_dssp TTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBC
T ss_pred CCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEE
Confidence 455677888777777788899999999999999999999999999999999875321 1112235678888999999
Q ss_pred CCC-CCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeC-CCCEEEEeeCCCeEEEEE
Q 015438 178 SPD-QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSDDCIYVYD 255 (407)
Q Consensus 178 sp~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d 255 (407)
+|+ +..|++|+.|+.|++||+.+++....+... ...+|...|.+++|++ ++++|++|+.|+.|++||
T Consensus 166 ~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~-----------~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd 234 (380)
T 3iz6_a 166 VPDQETRLITGSGDQTCVLWDVTTGQRISIFGSE-----------FPSGHTADVLSLSINSLNANMFISGSCDTTVRLWD 234 (380)
T ss_dssp CSSSSSCEEEECTTSCEEEECTTTCCEEEEECCC-----------SSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEE
T ss_pred ecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecc-----------cCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEE
Confidence 997 457999999999999999988765433211 1235778999999987 788999999999999999
Q ss_pred cC-CCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeecccc-------CCeEEEEecCC
Q 015438 256 LE-ANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHL-------EGITFIDSRGD 327 (407)
Q Consensus 256 ~~-~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~-------~~i~~~~~s~~ 327 (407)
++ ..+.+..+.+|.+.|.+++|+ +++++|++|+.|++|++||++ .+.++..+..+. ..|++++|+|+
T Consensus 235 ~~~~~~~~~~~~~h~~~v~~v~~~-p~~~~l~s~s~D~~i~lwd~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 309 (380)
T 3iz6_a 235 LRITSRAVRTYHGHEGDINSVKFF-PDGQRFGTGSDDGTCRLFDMR----TGHQLQVYNREPDRNDNELPIVTSVAFSIS 309 (380)
T ss_dssp TTTTCCCCEEECCCSSCCCEEEEC-TTSSEEEEECSSSCEEEEETT----TTEEEEEECCCCSSSCCSSCSCSEEEECSS
T ss_pred CCCCCcceEEECCcCCCeEEEEEe-cCCCeEEEEcCCCeEEEEECC----CCcEEEEecccccccccccCceEEEEECCC
Confidence 98 457778888999999999998 789999999999999999998 777777765543 24899999999
Q ss_pred CCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCC-CCCcceEEEeCC
Q 015438 328 GRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKH-PCDQSVATYKGH 391 (407)
Q Consensus 328 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~v~~~~gh 391 (407)
|++|++|+.||.|++||+.+.+....+......+...|.+++|+|++++|++ +.|+.|++|+-.
T Consensus 310 g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 310 GRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp SSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECC
T ss_pred CCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecC
Confidence 9999999999999999998877665543333567778999999999987765 568999999743
No 34
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-35 Score=267.23 Aligned_cols=255 Identities=15% Similarity=0.101 Sum_probs=189.2
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCe----EEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEE
Q 015438 122 QTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGW----KIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVD 197 (407)
Q Consensus 122 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd 197 (407)
+|...|.+++|+|++++|++|+.|+.|+|||+.... .........+|...|.+++|+|++++|++++.|+.|++||
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd 135 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWE 135 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 399999999999999999999999999999985421 1122334567888999999999999999999999999999
Q ss_pred CCCC-ceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCC--eeeeeeeccCCCeEE
Q 015438 198 VGSG-TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN--KLSLRILAHTSDVNT 274 (407)
Q Consensus 198 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~v~~ 274 (407)
+... ....... ...+|...|.+++|+|++.+|++|+.|++|++||+.++ +++..+.+|.+.|.+
T Consensus 136 ~~~~~~~~~~~~-------------~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~ 202 (330)
T 2hes_X 136 TDESGEEYECIS-------------VLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWS 202 (330)
T ss_dssp CCTTCCCCEEEE-------------EECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEE
T ss_pred ccCCCCCeEEEE-------------EeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEE
Confidence 9533 2111111 01247778999999999999999999999999999876 677888899999999
Q ss_pred EEecCCC-CCEEEEEeCCCcEEEEeCcccCCCC----ceeeeecc-ccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 015438 275 VCFGDES-GHLIYSGSDDNLCKVWDRRCLNVKG----KPAGVLMG-HLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKM 348 (407)
Q Consensus 275 i~~s~~~-~~~l~s~~~d~~i~vwd~~~~~~~~----~~~~~~~~-~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 348 (407)
++|+|.. +.+|++|+.|++|++||++...... .+...+.+ |...|++++|++++ +|++++.||.|++||+.++
T Consensus 203 ~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 203 SDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp EEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETT
T ss_pred EEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCC
Confidence 9998432 6789999999999999997321111 33444554 88999999999765 8999999999999998765
Q ss_pred CCcccccCCCcccc-ccceeeeCCC--CCCccC-CCCCcceEEEeCC
Q 015438 349 SSNASCNLGFRSYE-WDYRWMDYPP--QARDLK-HPCDQSVATYKGH 391 (407)
Q Consensus 349 ~~~~~~~~~~~~~~-~~v~~~~~~~--~~~~l~-~~~~~~v~~~~gh 391 (407)
+....... ...+. ..+..++|+| ++++|+ .+.|+.|++|+-.
T Consensus 282 ~~~~~~~~-~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 282 EWKVFAKR-ALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp EEEEEEEE-SCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred ceEEEecc-ccccccceEEEEEEecCCCceEEEEecCCCcEEEEEec
Confidence 31111000 12233 3788899998 576665 5678999999753
No 35
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.5e-34 Score=262.90 Aligned_cols=265 Identities=15% Similarity=0.178 Sum_probs=207.5
Q ss_pred ccccceeeeeccCC-------CCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEE
Q 015438 102 ADCCHMLSRYLPVN-------GPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTD 174 (407)
Q Consensus 102 ~~~~~~~~~~~~~~-------~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~ 174 (407)
.+....+|+....+ ....+.+|...|.+++|+|++.++++|+.|+.|++||+.++..+.. ..+|...|.+
T Consensus 47 ~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~---~~~h~~~v~~ 123 (343)
T 2xzm_R 47 RDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKR---FVGHQSEVYS 123 (343)
T ss_dssp TTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEE---EECCCSCEEE
T ss_pred CCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEE---EcCCCCcEEE
Confidence 34455566654322 2245789999999999999999999999999999999998865543 4567888999
Q ss_pred EEECCCCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCC----------CEEEE
Q 015438 175 TSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG----------RELVA 244 (407)
Q Consensus 175 ~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~----------~~l~~ 244 (407)
++|+|++++|++++.|+.|++||+......... ...+|...|.+++|+|++ .+|++
T Consensus 124 v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~--------------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s 189 (343)
T 2xzm_R 124 VAFSPDNRQILSAGAEREIKLWNILGECKFSSA--------------EKENHSDWVSCVRYSPIMKSANKVQPFAPYFAS 189 (343)
T ss_dssp EEECSSTTEEEEEETTSCEEEEESSSCEEEECC--------------TTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEE
T ss_pred EEECCCCCEEEEEcCCCEEEEEeccCCceeeee--------------cccCCCceeeeeeeccccccccccCCCCCEEEE
Confidence 999999999999999999999999743221111 122466789999999987 78999
Q ss_pred eeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEe
Q 015438 245 GSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDS 324 (407)
Q Consensus 245 ~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~ 324 (407)
++.|+.|++||. ..+....+..|...|.+++|+ +++++|++|+.|+.|++||++. ...+...+ .+...|.+++|
T Consensus 190 ~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s-~~g~~l~sgs~dg~v~iwd~~~---~~~~~~~~-~~~~~v~~v~~ 263 (343)
T 2xzm_R 190 VGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSIS-PNGKYIATGGKDKKLLIWDILN---LTYPQREF-DAGSTINQIAF 263 (343)
T ss_dssp EETTSEEEEEET-TTEEEEEEECCSSCEEEEEEC-TTSSEEEEEETTCEEEEEESSC---CSSCSEEE-ECSSCEEEEEE
T ss_pred EcCCCEEEEEcC-CCceeEEEcCccccceEEEEC-CCCCEEEEEcCCCeEEEEECCC---Ccccceee-cCCCcEEEEEE
Confidence 999999999994 566777888999999999998 8899999999999999999952 23333333 34567999999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCCCcc--cccC-------CCccccccceeeeCCCCCCccCCC-CCcceEEEeC
Q 015438 325 RGDGRYLISNGKDQAIKLWDIRKMSSNA--SCNL-------GFRSYEWDYRWMDYPPQARDLKHP-CDQSVATYKG 390 (407)
Q Consensus 325 s~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~-------~~~~~~~~v~~~~~~~~~~~l~~~-~~~~v~~~~g 390 (407)
+|++.+++++ .|+.|++||+.+.+... .+.. ....+...+..++|+|++.+|+++ .|+.|++|+-
T Consensus 264 sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~ 338 (343)
T 2xzm_R 264 NPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSF 338 (343)
T ss_dssp CSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEE
T ss_pred CCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEE
Confidence 9999887655 58889999998876544 2211 012345568899999999877654 6899999974
No 36
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.1e-34 Score=260.15 Aligned_cols=262 Identities=19% Similarity=0.237 Sum_probs=218.3
Q ss_pred ccccceeeeeccCCCCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCC
Q 015438 102 ADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQ 181 (407)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 181 (407)
.+....+|.....+....+.+|...|.+++|+|++++|++++.|+.|++||+.++..+.. ...|...|.++.|+|++
T Consensus 43 ~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~---~~~~~~~v~~~~~~~~~ 119 (312)
T 4ery_A 43 ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKT---LKGHSNYVFCCNFNPQS 119 (312)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE---EECCSSCEEEEEECSSS
T ss_pred CCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEE---EcCCCCCEEEEEEcCCC
Confidence 344555666666666677889999999999999999999999999999999998865543 44577789999999999
Q ss_pred CeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCee
Q 015438 182 RHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL 261 (407)
Q Consensus 182 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~ 261 (407)
++|++++.|+.|++||+++++....+. .|...|.+++|+|++++|++++.||.|++||+++++.
T Consensus 120 ~~l~s~~~d~~i~iwd~~~~~~~~~~~----------------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~ 183 (312)
T 4ery_A 120 NLIVSGSFDESVRIWDVKTGKCLKTLP----------------AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 183 (312)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEEC----------------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CEEEEEeCCCcEEEEECCCCEEEEEec----------------CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCce
Confidence 999999999999999999876543322 3556899999999999999999999999999999988
Q ss_pred eeeee-ccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeE---EEEecCCCCEEEEEeCC
Q 015438 262 SLRIL-AHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGIT---FIDSRGDGRYLISNGKD 337 (407)
Q Consensus 262 ~~~~~-~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~---~~~~s~~~~~l~s~~~d 337 (407)
+..+. .+...+..++|+ +++++|++++.|+.|++||++ .++++..+.+|...+. .....+++.+|++|+.|
T Consensus 184 ~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~d~~i~iwd~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d 258 (312)
T 4ery_A 184 LKTLIDDDNPPVSFVKFS-PNGKYILAATLDNTLKLWDYS----KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 258 (312)
T ss_dssp EEEECCSSCCCEEEEEEC-TTSSEEEEEETTTEEEEEETT----TTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTT
T ss_pred eeEEeccCCCceEEEEEC-CCCCEEEEEcCCCeEEEEECC----CCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCC
Confidence 77654 456789999998 889999999999999999998 7888888888876533 22334688999999999
Q ss_pred CcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCCC---CCcceEEEeCC
Q 015438 338 QAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHP---CDQSVATYKGH 391 (407)
Q Consensus 338 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~---~~~~v~~~~gh 391 (407)
|.|++||+++.+....+ ..+...+..++|+|++.+++++ .|+.|++|+.+
T Consensus 259 g~i~vwd~~~~~~~~~~----~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 259 NLVYIWNLQTKEIVQKL----QGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp SCEEEEETTTCCEEEEE----CCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred CEEEEEECCCchhhhhh----hccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 99999999988765543 3455678889999999988865 58999999753
No 37
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.1e-35 Score=267.32 Aligned_cols=261 Identities=17% Similarity=0.137 Sum_probs=211.5
Q ss_pred CCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCC--CCeEEEEeCCCeE
Q 015438 116 GPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD--QRHLVYASMSPIV 193 (407)
Q Consensus 116 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~dg~i 193 (407)
....+.+|.+.|.+++|+|++++||+|+.||.|+|||+..+.. ........|...|++++|+|+ +++|++++.||.|
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH-KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcc-eeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 3467889999999999999999999999999999999975422 223345678889999999987 9999999999999
Q ss_pred EEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCC--CCEEEEeeCCCeEEEEEcCCCe--eeeeeeccC
Q 015438 194 HIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD--GRELVAGSSDDCIYVYDLEANK--LSLRILAHT 269 (407)
Q Consensus 194 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~ 269 (407)
++||+.++........ .+|...|.+++|+|+ +.+|++++.|+.|++||+++.. ....+..|.
T Consensus 82 ~iwd~~~~~~~~~~~~--------------~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 147 (379)
T 3jrp_A 82 LIWKEENGRWSQIAVH--------------AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA 147 (379)
T ss_dssp EEEEEETTEEEEEEEE--------------CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCT
T ss_pred EEEEcCCCceeEeeee--------------cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCC
Confidence 9999988753222211 135668999999999 9999999999999999998873 344567899
Q ss_pred CCeEEEEecCC------------CCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCC---CCEEEEE
Q 015438 270 SDVNTVCFGDE------------SGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGD---GRYLISN 334 (407)
Q Consensus 270 ~~v~~i~~s~~------------~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---~~~l~s~ 334 (407)
..|.+++|+|. ++.+|++++.|+.|++||++...........+.+|...|++++|+|+ +++|+++
T Consensus 148 ~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~ 227 (379)
T 3jrp_A 148 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASV 227 (379)
T ss_dssp TCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred CceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEE
Confidence 99999999854 68999999999999999998432223456678899999999999999 8999999
Q ss_pred eCCCcEEEEECCCCCCcccc-cCCCccccccceeeeCCCCCCccCC-CCCcceEEEeCC
Q 015438 335 GKDQAIKLWDIRKMSSNASC-NLGFRSYEWDYRWMDYPPQARDLKH-PCDQSVATYKGH 391 (407)
Q Consensus 335 ~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~v~~~~gh 391 (407)
+.||.|++||+++....... ......+...+..+.|+|++++|++ +.|+.|++|+-.
T Consensus 228 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 228 SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp ETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred eCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 99999999999987543221 1123345667889999999987765 578999999754
No 38
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-35 Score=282.70 Aligned_cols=279 Identities=10% Similarity=0.043 Sum_probs=206.1
Q ss_pred ccceeeeeccCCCC----cccccCCCceEEEEECCC------CCEEEEEeCCCeEEEEEcCCCeEE-----e---Eeeec
Q 015438 104 CCHMLSRYLPVNGP----WPVDQTTSRAYVSQFSAD------GSLFVAGFQASQIRIYDVERGWKI-----Q---KDILA 165 (407)
Q Consensus 104 ~~~~~~~~~~~~~~----~~~~~h~~~v~~~~~s~~------~~~l~~~~~dg~i~iwd~~~~~~~-----~---~~~~~ 165 (407)
....+|+....+.. ..+.+|.+.|.+++|+|+ +.+||+++.||+|+|||+.++... . .....
T Consensus 183 ~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l 262 (524)
T 2j04_B 183 SCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTL 262 (524)
T ss_dssp EEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEE
T ss_pred ceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEE
Confidence 34556665444332 235678899999999997 579999999999999999875321 0 01234
Q ss_pred cccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEE--EEeCCC-CEE
Q 015438 166 KSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSL--KFSTDG-REL 242 (407)
Q Consensus 166 ~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~s~~~-~~l 242 (407)
..|...|++++|+|++ .|++|+.||+|++||++++..... . ..+|...|.++ .|+|++ .+|
T Consensus 263 ~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~-~--------------~~~H~~~V~sv~~~~s~~g~~~l 326 (524)
T 2j04_B 263 SLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSF-Y--------------DQVHDSYILSVSTAYSDFEDTVV 326 (524)
T ss_dssp CCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSE-E--------------EECSSSCEEEEEEECCTTSCCEE
T ss_pred EcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceE-E--------------eecccccEEEEEEEcCCCCCeEE
Confidence 5677889999999864 899999999999999986532110 0 11477789999 578887 899
Q ss_pred EEeeCCCeEEEEEcCCCeeeeeeeccCC--CeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeE
Q 015438 243 VAGSSDDCIYVYDLEANKLSLRILAHTS--DVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGIT 320 (407)
Q Consensus 243 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~ 320 (407)
++|+.|++|++||+++++++..+.+|.. .|.+++|+ ++++.+++++.|++|++||++ .+.++..+.+|...|+
T Consensus 327 aS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fs-p~~~~l~s~~~d~tv~lwd~~----~~~~~~~l~gH~~~V~ 401 (524)
T 2j04_B 327 STVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYC-PQIYSYIYSDGASSLRAVPSR----AAFAVHPLVSRETTIT 401 (524)
T ss_dssp EEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEE-TTTTEEEEECSSSEEEEEETT----CTTCCEEEEECSSCEE
T ss_pred EEeccCCeEEEEECCCCCcccccccccccCcccceEeC-CCcCeEEEeCCCCcEEEEECc----ccccceeeecCCCceE
Confidence 9999999999999999888777777653 58899999 778889999999999999998 7777788889999999
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCC-CccccccceeeeCCCCCCccCCC----------CCcceEEEe
Q 015438 321 FIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLG-FRSYEWDYRWMDYPPQARDLKHP----------CDQSVATYK 389 (407)
Q Consensus 321 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~----------~~~~v~~~~ 389 (407)
+++|+|+|++|++|+.||+|++||+... ........ .....+.+..++|+|++..+... .+..+..+.
T Consensus 402 sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~ 480 (524)
T 2j04_B 402 AIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKID 480 (524)
T ss_dssp EEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC------------
T ss_pred EEEeCCCCCeEEEEECCCEEEEEechHh-hccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeec
Confidence 9999999999999999999999998653 22211100 01122345578899988744322 245677788
Q ss_pred CCccceeeEEEeeCCCC
Q 015438 390 GHSVLRTLIRCHFSPVY 406 (407)
Q Consensus 390 gh~~~~~~~~~~fsp~~ 406 (407)
||.. .|..|+|||+.
T Consensus 481 gh~~--~V~~Vafsp~~ 495 (524)
T 2j04_B 481 AHGI--NITCTKWNETS 495 (524)
T ss_dssp -CCC--SCCCEEECCST
T ss_pred CCCc--eEEEEECCCCC
Confidence 8875 78899999985
No 39
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-34 Score=263.62 Aligned_cols=258 Identities=15% Similarity=0.159 Sum_probs=217.5
Q ss_pred cccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEE
Q 015438 118 WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVD 197 (407)
Q Consensus 118 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd 197 (407)
..+.+|.+.|.+++|+|++++|++++.||.|++||+.++..+.. ...|...|.+++|+|++++|++++.||.|++||
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~---~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 102 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGT---LDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWD 102 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEE---ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhh---hhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 45789999999999999999999999999999999998865543 456778899999999999999999999999999
Q ss_pred CCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCC-----CeEEEEEcCCCe-----------e
Q 015438 198 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-----DCIYVYDLEANK-----------L 261 (407)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~-----------~ 261 (407)
+.+++...... +...|.+++|+|++++|++++.+ +.|++||+.... .
T Consensus 103 ~~~~~~~~~~~-----------------~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~ 165 (369)
T 3zwl_B 103 VSNGQCVATWK-----------------SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEP 165 (369)
T ss_dssp TTTCCEEEEEE-----------------CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSC
T ss_pred CCCCcEEEEee-----------------cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccce
Confidence 99887655443 23379999999999999999998 999999998654 3
Q ss_pred eeeeeccCC--CeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCC-CceeeeeccccCCeEEEEecCCCCEEEEEeCCC
Q 015438 262 SLRILAHTS--DVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVK-GKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQ 338 (407)
Q Consensus 262 ~~~~~~~~~--~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg 338 (407)
+..+..|.. .+.+++|+ +++++|++++.||.|++||++ . ...+..+..|...|.+++|+|++++|++++.|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~dg~i~i~d~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 240 (369)
T 3zwl_B 166 IHKIITHEGLDAATVAGWS-TKGKYIIAGHKDGKISKYDVS----NNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDT 240 (369)
T ss_dssp SEEEECCTTCCCEEEEEEC-GGGCEEEEEETTSEEEEEETT----TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred eeeccCCcCccceeEEEEc-CCCCEEEEEcCCCEEEEEECC----CCcEeEEEEecCCCceeEEEECCCCCEEEEecCCc
Confidence 344455666 89999998 789999999999999999998 5 678888999999999999999999999999999
Q ss_pred cEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCCCCC-c--------------ceE-----------EEeCCc
Q 015438 339 AIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCD-Q--------------SVA-----------TYKGHS 392 (407)
Q Consensus 339 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~--------------~v~-----------~~~gh~ 392 (407)
.|++||+++++....+. ....+..+.|+|++++++++.. + .+. .+.+|.
T Consensus 241 ~i~v~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 315 (369)
T 3zwl_B 241 NSFLVDVSTLQVLKKYE-----TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHF 315 (369)
T ss_dssp EEEEEETTTCCEEEEEE-----CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCS
T ss_pred eEEEEECCCCceeeeec-----CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheeccc
Confidence 99999999987766542 4566788999999988876532 2 344 445665
Q ss_pred cceeeEEEeeCCCCC
Q 015438 393 VLRTLIRCHFSPVYR 407 (407)
Q Consensus 393 ~~~~~~~~~fsp~~~ 407 (407)
. .+..+.|+|+.+
T Consensus 316 ~--~v~~~~~s~~~~ 328 (369)
T 3zwl_B 316 G--PLNTVAISPQGT 328 (369)
T ss_dssp S--CEEEEEECTTSS
T ss_pred C--cEEEEEECCCCC
Confidence 4 688899999864
No 40
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2e-34 Score=260.65 Aligned_cols=263 Identities=15% Similarity=0.175 Sum_probs=217.3
Q ss_pred ccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEee--eccccceEEEEEEECCCCCeEEEEeCCCeEEEE
Q 015438 119 PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDI--LAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (407)
Q Consensus 119 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vw 196 (407)
...+|...|.+++|+|++++|++++ ||.|++||+.++....... ....|...|.+++|+|++++|++++.|+.|++|
T Consensus 46 ~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 124 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 124 (337)
T ss_dssp EEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEE
T ss_pred eeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence 3457999999999999999999998 9999999998764322222 223677889999999999999999999999999
Q ss_pred ECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEE
Q 015438 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVC 276 (407)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~ 276 (407)
|+.+++........ +|...|.+++|+|++++|++++.||.|++||+++++.+..+..|...+.+++
T Consensus 125 d~~~~~~~~~~~~~--------------~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~ 190 (337)
T 1gxr_A 125 DLAAPTPRIKAELT--------------SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCID 190 (337)
T ss_dssp ECCCC--EEEEEEE--------------CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred ECCCCCcceeeecc--------------cCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEE
Confidence 99887632222111 3556899999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccC
Q 015438 277 FGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNL 356 (407)
Q Consensus 277 ~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 356 (407)
|+ +++++|++++.|+.|++||++ .++.+..+. +...+.+++|+|++++|++++.|+.|++||+++.+...
T Consensus 191 ~~-~~~~~l~~~~~dg~i~~~d~~----~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~---- 260 (337)
T 1gxr_A 191 IS-NDGTKLWTGGLDNTVRSWDLR----EGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ---- 260 (337)
T ss_dssp EC-TTSSEEEEEETTSEEEEEETT----TTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEE----
T ss_pred EC-CCCCEEEEEecCCcEEEEECC----CCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEE----
Confidence 98 788999999999999999998 667766654 77889999999999999999999999999999876432
Q ss_pred CCccccccceeeeCCCCCCccCC-CCCcceEEEeCCcc--------ceeeEEEeeCCCCC
Q 015438 357 GFRSYEWDYRWMDYPPQARDLKH-PCDQSVATYKGHSV--------LRTLIRCHFSPVYR 407 (407)
Q Consensus 357 ~~~~~~~~v~~~~~~~~~~~l~~-~~~~~v~~~~gh~~--------~~~~~~~~fsp~~~ 407 (407)
...+...+..+.|+|++++|++ +.|+.+++|+-.+. ...+..+.|+|+.+
T Consensus 261 -~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 319 (337)
T 1gxr_A 261 -LHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDK 319 (337)
T ss_dssp -ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSC
T ss_pred -EcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCC
Confidence 3445667899999999987665 46888999985431 23567789999864
No 41
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.7e-34 Score=278.49 Aligned_cols=260 Identities=22% Similarity=0.341 Sum_probs=217.9
Q ss_pred cCCCCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCe
Q 015438 113 PVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPI 192 (407)
Q Consensus 113 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~ 192 (407)
..+....+.+|...|.+++|+|++++|++++.|+.|++||.... .+. ....|...|.+++|+|++++|++++.|+.
T Consensus 292 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~-~~~---~~~~~~~~v~~~~~s~~g~~l~~~~~dg~ 367 (577)
T 2ymu_A 292 NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ-HLQ---TLTGHSSSVWGVAFSPDGQTIASASDDKT 367 (577)
T ss_dssp TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC-EEE---EECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC-eeE---EEeCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 34445567899999999999999999999999999999998764 222 34567778999999999999999999999
Q ss_pred EEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCe
Q 015438 193 VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDV 272 (407)
Q Consensus 193 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v 272 (407)
|++||... +..... .+|...|.+++|+|++++|++++.|+.|++||. +++.+..+..|...|
T Consensus 368 v~~~~~~~-~~~~~~----------------~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v 429 (577)
T 2ymu_A 368 VKLWNRNG-QLLQTL----------------TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV 429 (577)
T ss_dssp EEEEETTC-CEEEEE----------------ECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCE
T ss_pred EEEEcCCC-CEEEEe----------------cCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCe
Confidence 99999643 222111 136668999999999999999999999999996 567788889999999
Q ss_pred EEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcc
Q 015438 273 NTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNA 352 (407)
Q Consensus 273 ~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~ 352 (407)
.+++|+ +++++|++++.|+.|++||. +++.+..+.+|...|++++|+|++++|++++.|+.|++||. +++.+.
T Consensus 430 ~~~~~s-~d~~~l~~~~~d~~v~~w~~-----~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~ 502 (577)
T 2ymu_A 430 WGVAFS-PDDQTIASASDDKTVKLWNR-----NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQ 502 (577)
T ss_dssp EEEEEC-TTSSEEEEEETTSEEEEEET-----TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEE
T ss_pred EEEEEC-CCCCEEEEEcCCCEEEEEEC-----CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEE
Confidence 999998 78899999999999999997 56788899999999999999999999999999999999995 344433
Q ss_pred cccCCCccccccceeeeCCCCCCccCCC-CCcceEEEe----------CCccceeeEEEeeCCCCC
Q 015438 353 SCNLGFRSYEWDYRWMDYPPQARDLKHP-CDQSVATYK----------GHSVLRTLIRCHFSPVYR 407 (407)
Q Consensus 353 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~v~~~~----------gh~~~~~~~~~~fsp~~~ 407 (407)
. ...+...|..++|+|++++|+++ .|+.|++|+ ||+. .+..+.|+||.+
T Consensus 503 ~----~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~h~~--~v~~~~fs~dg~ 562 (577)
T 2ymu_A 503 T----LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSS--SVWGVAFSPDGQ 562 (577)
T ss_dssp E----EECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSS--CEEEEEECTTSS
T ss_pred E----EeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEEcCCCC--CEEEEEEcCCCC
Confidence 3 34566789999999999888754 567777664 6654 688899999975
No 42
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.1e-36 Score=278.67 Aligned_cols=256 Identities=12% Similarity=0.093 Sum_probs=202.8
Q ss_pred ccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEEC
Q 015438 119 PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV 198 (407)
Q Consensus 119 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~ 198 (407)
....+.++|.+++|+|++++||+|+.|+.|+|||+.++. .........|...|.+++|+|++++|++++.|+.|++||+
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~ 84 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNG-WKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEK 84 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTE-EEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCc-eEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence 344567899999999999999999999999999998763 1223345678889999999999999999999999999999
Q ss_pred CCCc-eeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCe---eeeeeec-cCCCeE
Q 015438 199 GSGT-MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK---LSLRILA-HTSDVN 273 (407)
Q Consensus 199 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~-~~~~v~ 273 (407)
.++. ...... ..+|...|.+++|+|++++|++++.|+.|++||+++++ ....+.. |...|.
T Consensus 85 ~~~~~~~~~~~--------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~ 150 (377)
T 3dwl_C 85 RPDGTWKQTLV--------------LLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTIL 150 (377)
T ss_dssp ----CCCCEEE--------------CCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEE
T ss_pred CCCCceeeeeE--------------ecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeE
Confidence 8876 111111 12466789999999999999999999999999999887 3667777 999999
Q ss_pred EEEecCCCCCEEEEEeCCCcEEEEeCcccC--------------CCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCc
Q 015438 274 TVCFGDESGHLIYSGSDDNLCKVWDRRCLN--------------VKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQA 339 (407)
Q Consensus 274 ~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~--------------~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~ 339 (407)
+++|+ +++++|++++.|+.|++||++... ..++++..+ +|...|++++|+|++++|++++.||.
T Consensus 151 ~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~ 228 (377)
T 3dwl_C 151 SLDWH-PNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSS 228 (377)
T ss_dssp EEEEC-TTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTE
T ss_pred EEEEc-CCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCc
Confidence 99998 789999999999999999985211 124556666 89999999999999999999999999
Q ss_pred EEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCCCCCcceEEEeCC
Q 015438 340 IKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGH 391 (407)
Q Consensus 340 i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~gh 391 (407)
|++||+++.+...........+...+..+.|+|++++|+++.++.+.+|...
T Consensus 229 i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 229 VTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp EC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred EEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 9999999988733222234556677899999999999999888888888754
No 43
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.9e-34 Score=268.10 Aligned_cols=277 Identities=13% Similarity=0.143 Sum_probs=217.9
Q ss_pred cccceeeeeccCCCCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCC
Q 015438 103 DCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQR 182 (407)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 182 (407)
+....+|..........+..| ..+....|+|++++|++|+.||.|++||+.++.... ....|...|++++|+|+++
T Consensus 77 d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~---~~~~h~~~v~~~~~~~~~~ 152 (420)
T 3vl1_A 77 DGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQRE---IDQAHVSEITKLKFFPSGE 152 (420)
T ss_dssp TTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEE---ETTSSSSCEEEEEECTTSS
T ss_pred CCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceee---ecccccCccEEEEECCCCC
Confidence 444556666555555666666 555666899999999999999999999999875433 3457888999999999999
Q ss_pred eEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeee
Q 015438 183 HLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLS 262 (407)
Q Consensus 183 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~ 262 (407)
+|++++.|+.|++||+.+++....+. +|...|.+++|+|++++|++++.|+.|++||+++++.+
T Consensus 153 ~l~s~s~d~~i~iwd~~~~~~~~~~~----------------~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 216 (420)
T 3vl1_A 153 ALISSSQDMQLKIWSVKDGSNPRTLI----------------GHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTI 216 (420)
T ss_dssp EEEEEETTSEEEEEETTTCCCCEEEE----------------CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEEeCCCeEEEEeCCCCcCceEEc----------------CCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCcee
Confidence 99999999999999999876543321 46778999999999999999999999999999999988
Q ss_pred eeeec---cCCCeEE---------------------EEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeec-cccC
Q 015438 263 LRILA---HTSDVNT---------------------VCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLM-GHLE 317 (407)
Q Consensus 263 ~~~~~---~~~~v~~---------------------i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~-~~~~ 317 (407)
..+.. +...+.+ ++|+ +++++|++|+.||.|++||++ .++.+..+. +|..
T Consensus 217 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~dg~i~i~d~~----~~~~~~~~~~~~~~ 291 (420)
T 3vl1_A 217 HTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFG-TYGKYVIAGHVSGVITVHNVF----SKEQTIQLPSKFTC 291 (420)
T ss_dssp EEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSS-CTTEEEEEEETTSCEEEEETT----TCCEEEEECCTTSS
T ss_pred EEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEc-CCCCEEEEEcCCCeEEEEECC----CCceeEEcccccCC
Confidence 88764 3344444 4455 688899999999999999998 666665554 5888
Q ss_pred CeEEEEecCCCC-EEEEEeCCCcEEEEECCCCCC-cccccCCCccccccceeeeCCCCCCccCCCCCcceEEEeCCc---
Q 015438 318 GITFIDSRGDGR-YLISNGKDQAIKLWDIRKMSS-NASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHS--- 392 (407)
Q Consensus 318 ~i~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~gh~--- 392 (407)
.|++++|+|++. +|++|+.||.|++||+++.+. +..+ ...+...+..+.+++...+++.+.|+.+++|+-..
T Consensus 292 ~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 368 (420)
T 3vl1_A 292 SCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEF---LINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDPES 368 (420)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEE---EESTTSCEEEEEEETTEEEEEETTTEEEEEEEECCTTC
T ss_pred CceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhh---hccCCCCceEEEeCCCCEEEEecCCccEEEEeccCCCC
Confidence 999999999998 999999999999999998765 3332 12245567777676555666677899999998322
Q ss_pred ---------------cceeeEEEeeCCCCC
Q 015438 393 ---------------VLRTLIRCHFSPVYR 407 (407)
Q Consensus 393 ---------------~~~~~~~~~fsp~~~ 407 (407)
....+..++|+|+.+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 398 (420)
T 3vl1_A 369 ERPAIEFETPTFLVSNDDAVSQFCYVSDDE 398 (420)
T ss_dssp CSCEECTTSCEEECCSSCCCCEEEEECCSS
T ss_pred CccceeccCccEEccCCcceEEEEEccCCC
Confidence 112467788999864
No 44
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.1e-34 Score=266.27 Aligned_cols=254 Identities=12% Similarity=0.050 Sum_probs=212.3
Q ss_pred ccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEEC
Q 015438 119 PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV 198 (407)
Q Consensus 119 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~ 198 (407)
.+..|..+|.+++|+|++++|++++.|+.|++||+.++.. ........|...|.+++|+|++++|++++.|+.|++||+
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 81 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW-VQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL 81 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEE-EEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcE-EeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEEC
Confidence 4556899999999999999999999999999999988741 122234567788999999999999999999999999999
Q ss_pred CCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCee---eee-eeccCCCeEE
Q 015438 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL---SLR-ILAHTSDVNT 274 (407)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~---~~~-~~~~~~~v~~ 274 (407)
.+++....... .+|...|.+++|+|++++|++++.|+.|++||++.++. ... ...|...|.+
T Consensus 82 ~~~~~~~~~~~--------------~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~ 147 (372)
T 1k8k_C 82 KGRTWKPTLVI--------------LRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLS 147 (372)
T ss_dssp ETTEEEEEEEC--------------CCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEE
T ss_pred CCCeeeeeEEe--------------ecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeE
Confidence 87764332221 13566899999999999999999999999999988762 223 3568899999
Q ss_pred EEecCCCCCEEEEEeCCCcEEEEeCccc--------------CCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcE
Q 015438 275 VCFGDESGHLIYSGSDDNLCKVWDRRCL--------------NVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAI 340 (407)
Q Consensus 275 i~~s~~~~~~l~s~~~d~~i~vwd~~~~--------------~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i 340 (407)
++|+ +++++|++++.|+.|++||++.. ...++++..+.+|...|++++|+|++++|++++.|+.|
T Consensus 148 ~~~~-~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 226 (372)
T 1k8k_C 148 LDWH-PNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTV 226 (372)
T ss_dssp EEEC-TTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEE
T ss_pred EEEc-CCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEE
Confidence 9998 78899999999999999996411 01467788888999999999999999999999999999
Q ss_pred EEEECCCCCCcccccCCCccccccceeeeCCCCCCccCCCCCcceEEEeCCc
Q 015438 341 KLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHS 392 (407)
Q Consensus 341 ~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~gh~ 392 (407)
++||+++++.+..+ ..+...+..+.|+|++++++++.|+.+++|+...
T Consensus 227 ~i~d~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 227 CLADADKKMAVATL----ASETLPLLAVTFITESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp EEEEGGGTTEEEEE----ECSSCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred EEEECCCCceeEEE----ccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccC
Confidence 99999988766554 3345578899999999999999999999998543
No 45
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-34 Score=269.32 Aligned_cols=274 Identities=15% Similarity=0.221 Sum_probs=215.0
Q ss_pred cccceeeeeccCC--CCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeE-EeEeeeccccceEEEEEEECC
Q 015438 103 DCCHMLSRYLPVN--GPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWK-IQKDILAKSLRWTVTDTSLSP 179 (407)
Q Consensus 103 ~~~~~~~~~~~~~--~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~sp 179 (407)
+....+|+..... .+.....|...|.+++|+|++++|++++.||.|++||+.+... .........|...|.+++|+|
T Consensus 44 d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 123 (416)
T 2pm9_A 44 DSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNA 123 (416)
T ss_dssp CCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECS
T ss_pred CCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcC
Confidence 3344555544332 1233346899999999999999999999999999999987110 012234566888999999999
Q ss_pred C-CCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCC-CCEEEEeeCCCeEEEEEcC
Q 015438 180 D-QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-GRELVAGSSDDCIYVYDLE 257 (407)
Q Consensus 180 ~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~i~d~~ 257 (407)
+ +++|++++.|+.|++||+.++........ .+......+|...|.+++|+|+ +.+|++++.|+.|++||++
T Consensus 124 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 196 (416)
T 2pm9_A 124 KQDNVLASGGNNGEIFIWDMNKCTESPSNYT-------PLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLK 196 (416)
T ss_dssp SSTTBEEEECSSSCEEBCBTTTTSSCTTTCC-------CBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETT
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcccccccc-------ccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC
Confidence 8 89999999999999999987752110000 0000112346778999999999 7899999999999999999
Q ss_pred CCeeeeeeecc------CCCeEEEEecCCCCCEEEEEeCCC---cEEEEeCcccCCCC-ceeeeec-cccCCeEEEEecC
Q 015438 258 ANKLSLRILAH------TSDVNTVCFGDESGHLIYSGSDDN---LCKVWDRRCLNVKG-KPAGVLM-GHLEGITFIDSRG 326 (407)
Q Consensus 258 ~~~~~~~~~~~------~~~v~~i~~s~~~~~~l~s~~~d~---~i~vwd~~~~~~~~-~~~~~~~-~~~~~i~~~~~s~ 326 (407)
+++.+..+..+ ...|.+++|+|....++++++.|+ .|++||++ .+ .++..+. +|...|++++|+|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~----~~~~~~~~~~~~~~~~v~~~~~s~ 272 (416)
T 2pm9_A 197 AKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLR----NANTPLQTLNQGHQKGILSLDWCH 272 (416)
T ss_dssp TTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETT----STTSCSBCCCSCCSSCEEEEEECS
T ss_pred CCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCC----CCCCCcEEeecCccCceeEEEeCC
Confidence 99988888766 789999999955558999999998 99999998 43 6677787 8999999999999
Q ss_pred -CCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCC-CccC-CCCCcceEEEeCC
Q 015438 327 -DGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQA-RDLK-HPCDQSVATYKGH 391 (407)
Q Consensus 327 -~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~-~~~~~~v~~~~gh 391 (407)
++++|++++.||.|++||+++++.+..+ ..+...+..+.|+|++ ++++ .+.|+.|++|+-.
T Consensus 273 ~~~~~l~s~~~dg~v~~wd~~~~~~~~~~----~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 273 QDEHLLLSSGRDNTVLLWNPESAEQLSQF----PARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQ 336 (416)
T ss_dssp SCSSCEEEEESSSEEEEECSSSCCEEEEE----ECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESC
T ss_pred CCCCeEEEEeCCCCEEEeeCCCCccceee----cCCCCceEEEEECCCCCCEEEEEecCCcEEEEEcc
Confidence 9999999999999999999998766553 3455678889999998 5554 5568999999843
No 46
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.1e-33 Score=256.60 Aligned_cols=265 Identities=13% Similarity=0.056 Sum_probs=207.3
Q ss_pred CcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEE-eEeeeccccceEEEEEEECC--CCCeEEEEeCCCeE
Q 015438 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKI-QKDILAKSLRWTVTDTSLSP--DQRHLVYASMSPIV 193 (407)
Q Consensus 117 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~sp--~~~~l~~~~~dg~i 193 (407)
...+.+|.+.|.+++|+|++++|++|+.||.|++||+.++... ........|...|++++|+| ++++|++++.||.|
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 3467899999999999999999999999999999999875322 22234456888999999999 69999999999999
Q ss_pred EEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCC--CCEEEEeeCCCeEEEEEcCCCeeeeeee-----
Q 015438 194 HIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD--GRELVAGSSDDCIYVYDLEANKLSLRIL----- 266 (407)
Q Consensus 194 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~----- 266 (407)
++||+.++........... .....+|...|.+++|+|+ +.+|++++.||.|++||+++++.+..+.
T Consensus 84 ~vwd~~~~~~~~~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~ 156 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNK-------LCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEM 156 (351)
T ss_dssp EEEEECTTSCTTSSCSEEE-------EEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEE
T ss_pred EEEecCCCcccccccCcce-------eeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccc
Confidence 9999987653211100000 0011246778999999999 9999999999999999999887554433
Q ss_pred --------ccCCCeEEEEecCC--CCCEEEEEeCCCcEEEEeCcccCCCCc--eeeeeccccCCeEEEEecCCC----CE
Q 015438 267 --------AHTSDVNTVCFGDE--SGHLIYSGSDDNLCKVWDRRCLNVKGK--PAGVLMGHLEGITFIDSRGDG----RY 330 (407)
Q Consensus 267 --------~~~~~v~~i~~s~~--~~~~l~s~~~d~~i~vwd~~~~~~~~~--~~~~~~~~~~~i~~~~~s~~~----~~ 330 (407)
.|...+.+++|+|. ++.++++++.|+.+.+|+.. .+. .+..+.+|...|++++|+|++ ++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~ 232 (351)
T 3f3f_A 157 KVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGK----DGKLHVAAKLPGHKSLIRSISWAPSIGRWYQL 232 (351)
T ss_dssp ESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECT----TSCEEEEEECCCCCSCEEEEEECCCSSCSSEE
T ss_pred cccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccC----CCceeeeeecCCCCcceeEEEECCCCCCcceE
Confidence 57788999999854 48899999999999888876 444 377788999999999999998 89
Q ss_pred EEEEeCCCcEEEEECCCCCCccc------------------------------------------ccCCCccccccceee
Q 015438 331 LISNGKDQAIKLWDIRKMSSNAS------------------------------------------CNLGFRSYEWDYRWM 368 (407)
Q Consensus 331 l~s~~~dg~i~iwd~~~~~~~~~------------------------------------------~~~~~~~~~~~v~~~ 368 (407)
|++++.||.|++||++....... .......+...+..+
T Consensus 233 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 312 (351)
T 3f3f_A 233 IATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSV 312 (351)
T ss_dssp EEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEE
T ss_pred EEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEE
Confidence 99999999999999987532111 111133456678999
Q ss_pred eCCCCCCccCC-CCCcceEEEeCCc
Q 015438 369 DYPPQARDLKH-PCDQSVATYKGHS 392 (407)
Q Consensus 369 ~~~~~~~~l~~-~~~~~v~~~~gh~ 392 (407)
.|+|++++|++ +.|+.|++|+-..
T Consensus 313 ~~s~~~~~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 313 SWNLTGTILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp EECSSSCCEEEEETTSCEEEEEECT
T ss_pred EEcCCCCEEEEecCCCcEEEEecCc
Confidence 99999987765 4689999998765
No 47
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.8e-33 Score=272.30 Aligned_cols=250 Identities=20% Similarity=0.328 Sum_probs=208.8
Q ss_pred ceeeeeccCCCCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEE
Q 015438 106 HMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLV 185 (407)
Q Consensus 106 ~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 185 (407)
..+|+. .......+.+|...|.+++|+|++++|++++.|+.|++||... ..+. ....|...|.+++|+|++++|+
T Consensus 327 i~~w~~-~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~-~~~~---~~~~~~~~v~~~~~s~dg~~l~ 401 (577)
T 2ymu_A 327 VKLWNR-NGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-QLLQ---TLTGHSSSVRGVAFSPDGQTIA 401 (577)
T ss_dssp EEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTC-CEEE---EEECCSSCEEEEEECTTSSCEE
T ss_pred EEEEeC-CCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCC-CEEE---EecCCCCCeEEEEECCCCCEEE
Confidence 334442 3344456788999999999999999999999999999999654 3333 3446777899999999999999
Q ss_pred EEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeee
Q 015438 186 YASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRI 265 (407)
Q Consensus 186 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 265 (407)
+++.|+.|++||... +..... .+|...|.+++|+|++++|++++.|+.|++||. +++.+..+
T Consensus 402 ~~~~d~~v~~~~~~~-~~~~~~----------------~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~ 463 (577)
T 2ymu_A 402 SASDDKTVKLWNRNG-QLLQTL----------------TGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTL 463 (577)
T ss_dssp EEETTSEEEEECTTC-CEEEEE----------------ECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEE
T ss_pred EEeCCCEEEEEeCCC-CEEEEe----------------cCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEE
Confidence 999999999999643 222111 146678999999999999999999999999996 46777888
Q ss_pred eccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEEC
Q 015438 266 LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDI 345 (407)
Q Consensus 266 ~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~ 345 (407)
.+|...|.+++|+ +++++|++++.|+.|++||. +++++..+.+|...|++++|+|+|++|++++.||.|++||.
T Consensus 464 ~~~~~~v~~~~~s-pd~~~las~~~d~~i~iw~~-----~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 464 TGHSSSVRGVAFS-PDGQTIASASDDKTVKLWNR-----NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp ECCSSCEEEEEEC-TTSCEEEEEETTSEEEEEET-----TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred cCCCCCEEEEEEc-CCCCEEEEEeCCCEEEEEcC-----CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 9999999999998 78999999999999999996 67889999999999999999999999999999999999996
Q ss_pred CCCCCcccccCCCccccccceeeeCCCCCCccC-CCCCcceEEEe
Q 015438 346 RKMSSNASCNLGFRSYEWDYRWMDYPPQARDLK-HPCDQSVATYK 389 (407)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~v~~~~ 389 (407)
+++.+.. ...+...|..++|+|++++|+ ++.|++|++|+
T Consensus 538 -~~~~~~~----~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 538 -NGQLLQT----LTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp -TSCEEEE----EECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred -CCCEEEE----EcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 3444333 345667889999999998775 45789999985
No 48
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=2.1e-33 Score=260.75 Aligned_cols=286 Identities=16% Similarity=0.201 Sum_probs=216.0
Q ss_pred ccccccceeeeeccCCCCcccccCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCCeEEeEeee----------cccc
Q 015438 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDIL----------AKSL 168 (407)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----------~~~~ 168 (407)
...+....++..........+.+|.+.|.+++|+| ++++|++|+.||.|++||+.++........ ...|
T Consensus 19 ~~~~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
T 4a11_B 19 RRAESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVH 98 (408)
T ss_dssp HHHHHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCC
T ss_pred eeccCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccC
Confidence 33444444555555566677888999999999999 999999999999999999987643322111 1247
Q ss_pred ceEEEEEEECC-CCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCC---CCEEEE
Q 015438 169 RWTVTDTSLSP-DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD---GRELVA 244 (407)
Q Consensus 169 ~~~v~~~~~sp-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~ 244 (407)
...|.+++|+| ++.+|++++.|+.|++||+.+++...... +...+.++.|+|. +.++++
T Consensus 99 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~ 161 (408)
T 4a11_B 99 RYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-----------------FEETVYSHHMSPVSTKHCLVAV 161 (408)
T ss_dssp SSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-----------------CSSCEEEEEECSSCSSCCEEEE
T ss_pred CCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-----------------CCCceeeeEeecCCCCCcEEEE
Confidence 88899999999 78899999999999999999887654443 2236889999984 459999
Q ss_pred eeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeee------------
Q 015438 245 GSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVL------------ 312 (407)
Q Consensus 245 ~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~------------ 312 (407)
++.|+.|++||+++++.+..+..|...|.+++|+|....+|++++.||.|++||++... .++..+
T Consensus 162 ~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~~~~~~~ 238 (408)
T 4a11_B 162 GTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRAS---GCLITLDQHNGKKSQAVE 238 (408)
T ss_dssp EESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSS---CCSEECCTTTTCSCCCTT
T ss_pred EcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCC---cccccccccccccceeec
Confidence 99999999999999999999999999999999995444479999999999999997321 123332
Q ss_pred ---ccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCcc-ccccce-eeeCCCCCCccCCCCCcceEE
Q 015438 313 ---MGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRS-YEWDYR-WMDYPPQARDLKHPCDQSVAT 387 (407)
Q Consensus 313 ---~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~v~-~~~~~~~~~~l~~~~~~~v~~ 387 (407)
.+|...|++++|+|++++|++++.||.|++||+++++........... ....+. .........++..+.++.+.+
T Consensus 239 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 318 (408)
T 4a11_B 239 SANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAV 318 (408)
T ss_dssp TSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEE
T ss_pred cccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEE
Confidence 578899999999999999999999999999999998765543221111 111111 122233445555555666666
Q ss_pred Ee-----------CCccceeeEEEeeCCCCC
Q 015438 388 YK-----------GHSVLRTLIRCHFSPVYR 407 (407)
Q Consensus 388 ~~-----------gh~~~~~~~~~~fsp~~~ 407 (407)
|+ +|.. .+..+.|+|+.+
T Consensus 319 ~d~~~~~~~~~~~~~~~--~v~~~~~s~~~~ 347 (408)
T 4a11_B 319 YTVYSGEQITMLKGHYK--TVDCCVFQSNFQ 347 (408)
T ss_dssp EETTTCCEEEEECCCSS--CEEEEEEETTTT
T ss_pred EECcCCcceeeeccCCC--eEEEEEEcCCCC
Confidence 64 5653 678899999864
No 49
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2e-32 Score=247.60 Aligned_cols=258 Identities=17% Similarity=0.196 Sum_probs=212.9
Q ss_pred cccceeeeeccCCCCcccc-----cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEE
Q 015438 103 DCCHMLSRYLPVNGPWPVD-----QTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSL 177 (407)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~-----~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~ 177 (407)
+....+|..........+. +|...|.+++|+|++++|++++.|+.|++||+.++... .......|...|.+++|
T Consensus 71 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~-~~~~~~~~~~~i~~~~~ 149 (337)
T 1gxr_A 71 KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPR-IKAELTSSAPACYALAI 149 (337)
T ss_dssp BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--E-EEEEEECSSSCEEEEEE
T ss_pred CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcc-eeeecccCCCceEEEEE
Confidence 4555566655443333332 79999999999999999999999999999999887532 22334557778999999
Q ss_pred CCCCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcC
Q 015438 178 SPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE 257 (407)
Q Consensus 178 sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 257 (407)
+|++++|++++.|+.|++||+.+++...... +|...|.+++|+|++++|++++.||.|++||++
T Consensus 150 ~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~----------------~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 213 (337)
T 1gxr_A 150 SPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ----------------GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLR 213 (337)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEEC----------------CCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCCCCEEEEEeCCCcEEEEeCCCCceeeeee----------------cccCceEEEEECCCCCEEEEEecCCcEEEEECC
Confidence 9999999999999999999999876543322 355689999999999999999999999999999
Q ss_pred CCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCC
Q 015438 258 ANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKD 337 (407)
Q Consensus 258 ~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~d 337 (407)
+++.+..+ .+...+.+++|+ +++++|++++.|+.|++||++ ... ...+..|...|++++|+|++++|++++.|
T Consensus 214 ~~~~~~~~-~~~~~v~~~~~s-~~~~~l~~~~~~~~i~~~~~~----~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 286 (337)
T 1gxr_A 214 EGRQLQQH-DFTSQIFSLGYC-PTGEWLAVGMESSNVEVLHVN----KPD-KYQLHLHESCVLSLKFAYCGKWFVSTGKD 286 (337)
T ss_dssp TTEEEEEE-ECSSCEEEEEEC-TTSSEEEEEETTSCEEEEETT----SSC-EEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCceEeee-cCCCceEEEEEC-CCCCEEEEEcCCCcEEEEECC----CCC-eEEEcCCccceeEEEECCCCCEEEEecCC
Confidence 99887776 578899999998 789999999999999999997 444 34677899999999999999999999999
Q ss_pred CcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCC-CCCcceEEEe
Q 015438 338 QAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKH-PCDQSVATYK 389 (407)
Q Consensus 338 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~v~~~~ 389 (407)
|.|++||+++++.... ..+...+..+.|+|++++|++ +.|+.+++|+
T Consensus 287 g~i~~~~~~~~~~~~~-----~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 334 (337)
T 1gxr_A 287 NLLNAWRTPYGASIFQ-----SKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp SEEEEEETTTCCEEEE-----EECSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred CcEEEEECCCCeEEEE-----ecCCCcEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 9999999998876532 234567889999999977764 5678888885
No 50
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-34 Score=268.94 Aligned_cols=276 Identities=12% Similarity=0.103 Sum_probs=221.2
Q ss_pred cccceeeeecc----CCCCcccccCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCCe------EEeEeeeccccceE
Q 015438 103 DCCHMLSRYLP----VNGPWPVDQTTSRAYVSQFSAD-GSLFVAGFQASQIRIYDVERGW------KIQKDILAKSLRWT 171 (407)
Q Consensus 103 ~~~~~~~~~~~----~~~~~~~~~h~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~------~~~~~~~~~~~~~~ 171 (407)
+....+|.... ......+.+|...|.+++|+|+ +++|++++.|+.|++||+.++. ..........|...
T Consensus 88 dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (416)
T 2pm9_A 88 NGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDE 167 (416)
T ss_dssp SSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCC
T ss_pred CCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCC
Confidence 34455555544 2345567889999999999998 8999999999999999998875 33232234567788
Q ss_pred EEEEEECCC-CCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCC-CEEEEeeCCC
Q 015438 172 VTDTSLSPD-QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG-RELVAGSSDD 249 (407)
Q Consensus 172 v~~~~~sp~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg 249 (407)
|.+++|+|+ +.+|++++.|+.|++||+.+++.......... ..+|...|.+++|+|++ .+|++++.|+
T Consensus 168 v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~----------~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 237 (416)
T 2pm9_A 168 VISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSP----------NSGIKQQLSVVEWHPKNSTRVATATGSD 237 (416)
T ss_dssp CCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCC----------SSCCCCCEEEEEECSSCTTEEEEEECCS
T ss_pred eeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEecccc----------ccccCCceEEEEECCCCCCEEEEEECCC
Confidence 999999999 78999999999999999998776544332110 12346689999999997 6899999998
Q ss_pred ---eEEEEEcCCC-eeeeeee-ccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEe
Q 015438 250 ---CIYVYDLEAN-KLSLRIL-AHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDS 324 (407)
Q Consensus 250 ---~i~i~d~~~~-~~~~~~~-~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~ 324 (407)
.|++||++++ +++..+. .|...|.+++|+|.++++|++++.|+.|++||++ .++++..+.+|...|++++|
T Consensus 238 ~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~----~~~~~~~~~~~~~~v~~~~~ 313 (416)
T 2pm9_A 238 NDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPE----SAEQLSQFPARGNWCFKTKF 313 (416)
T ss_dssp SSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSS----SCCEEEEEECSSSCCCCEEE
T ss_pred CCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCC----CCccceeecCCCCceEEEEE
Confidence 9999999986 6677777 8999999999995589999999999999999998 88899999999999999999
Q ss_pred cCCC-CEEEEEeCCCcEEEEECCCCCCcccccC-------------------------------CCccccccceeeeCCC
Q 015438 325 RGDG-RYLISNGKDQAIKLWDIRKMSSNASCNL-------------------------------GFRSYEWDYRWMDYPP 372 (407)
Q Consensus 325 s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~-------------------------------~~~~~~~~v~~~~~~~ 372 (407)
+|++ .+|++++.|+.|++||+.+.+....... ....+...+..++|+|
T Consensus 314 s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 393 (416)
T 2pm9_A 314 APEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAF 393 (416)
T ss_dssp CTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEET
T ss_pred CCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEee
Confidence 9999 8999999999999999998775443210 0001344566889999
Q ss_pred CCCccCCCC-CcceEEEeCCc
Q 015438 373 QARDLKHPC-DQSVATYKGHS 392 (407)
Q Consensus 373 ~~~~l~~~~-~~~v~~~~gh~ 392 (407)
+|++|+++. |+.|++|+-.+
T Consensus 394 dg~~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 394 GGKLVQITPDGKGVSITNPKI 414 (416)
T ss_dssp TTEEECBCTTSSCBCCBCCCC
T ss_pred CCeEEEEeCCCCeEEEEEecc
Confidence 999998775 78888887543
No 51
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=4.4e-33 Score=276.77 Aligned_cols=266 Identities=19% Similarity=0.247 Sum_probs=214.6
Q ss_pred ccccceeeeeccCCC-----CcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEE
Q 015438 102 ADCCHMLSRYLPVNG-----PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTS 176 (407)
Q Consensus 102 ~~~~~~~~~~~~~~~-----~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~ 176 (407)
.|....+|+...... ...+.+|...|.+++|+|++++|++|+.|+.|+|||+.++..... ...|...|.+++
T Consensus 403 ~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~---~~~h~~~v~~~~ 479 (694)
T 3dm0_A 403 RDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRR---FVGHTKDVLSVA 479 (694)
T ss_dssp TTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE---EECCSSCEEEEE
T ss_pred CCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeE---EeCCCCCEEEEE
Confidence 445566776544332 235789999999999999999999999999999999999865543 456888899999
Q ss_pred ECCCCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCC--CEEEEeeCCCeEEEE
Q 015438 177 LSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG--RELVAGSSDDCIYVY 254 (407)
Q Consensus 177 ~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~dg~i~i~ 254 (407)
|+|++++|++++.|++|++||+.......... ...+|...|.+++|+|++ ..|++|+.|++|++|
T Consensus 480 ~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~-------------~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vw 546 (694)
T 3dm0_A 480 FSLDNRQIVSASRDRTIKLWNTLGECKYTISE-------------GGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVW 546 (694)
T ss_dssp ECTTSSCEEEEETTSCEEEECTTSCEEEEECS-------------STTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEE
T ss_pred EeCCCCEEEEEeCCCEEEEEECCCCcceeecc-------------CCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEE
Confidence 99999999999999999999986543222111 123577789999999987 589999999999999
Q ss_pred EcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEE
Q 015438 255 DLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISN 334 (407)
Q Consensus 255 d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~ 334 (407)
|+++++....+.+|.+.|.+++|+ +++++|++|+.|+.|++||++ .++++..+.. ...|.+++|+|++.+|+++
T Consensus 547 d~~~~~~~~~~~~h~~~v~~v~~s-pdg~~l~sg~~Dg~i~iwd~~----~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~ 620 (694)
T 3dm0_A 547 NLSNCKLRSTLAGHTGYVSTVAVS-PDGSLCASGGKDGVVLLWDLA----EGKKLYSLEA-NSVIHALCFSPNRYWLCAA 620 (694)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSBCEEEETT----TTEEEECCBC-SSCEEEEEECSSSSEEEEE
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEe-CCCCEEEEEeCCCeEEEEECC----CCceEEEecC-CCcEEEEEEcCCCcEEEEE
Confidence 999999999999999999999998 789999999999999999998 7777777764 4679999999999888776
Q ss_pred eCCCcEEEEECCCCCCcccccCCC---------------ccccccceeeeCCCCCCccCC-CCCcceEEEeC
Q 015438 335 GKDQAIKLWDIRKMSSNASCNLGF---------------RSYEWDYRWMDYPPQARDLKH-PCDQSVATYKG 390 (407)
Q Consensus 335 ~~dg~i~iwd~~~~~~~~~~~~~~---------------~~~~~~v~~~~~~~~~~~l~~-~~~~~v~~~~g 390 (407)
+ ++.|++||+++.+.+..+.... ......+..+.|+|++++|++ +.|+.|++|+-
T Consensus 621 ~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 621 T-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGI 691 (694)
T ss_dssp E-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred c-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEec
Confidence 6 5669999999877654432111 111223678899999988765 46899999974
No 52
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=5.7e-33 Score=258.06 Aligned_cols=257 Identities=15% Similarity=0.182 Sum_probs=206.7
Q ss_pred CCcccccCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCCeEE----eEeeeccccceEEEEEEECCCC-CeEEEEeC
Q 015438 116 GPWPVDQTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKI----QKDILAKSLRWTVTDTSLSPDQ-RHLVYASM 189 (407)
Q Consensus 116 ~~~~~~~h~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~----~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~ 189 (407)
....+.+|.+.|.+++|+| ++++|++|+.||.|+|||+.++... ........|...|.+++|+|++ ++|++++.
T Consensus 73 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~ 152 (402)
T 2aq5_A 73 NVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC 152 (402)
T ss_dssp TCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET
T ss_pred CCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC
Confidence 3456789999999999999 9999999999999999999886221 1122345678899999999998 69999999
Q ss_pred CCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeee-ecc
Q 015438 190 SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRI-LAH 268 (407)
Q Consensus 190 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~ 268 (407)
|+.|++||+.+++...... ..+|...|.+++|+|++++|++++.||.|++||+++++.+..+ ..|
T Consensus 153 dg~i~iwd~~~~~~~~~~~--------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 218 (402)
T 2aq5_A 153 DNVILVWDVGTGAAVLTLG--------------PDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPH 218 (402)
T ss_dssp TSCEEEEETTTTEEEEEEC--------------TTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSS
T ss_pred CCEEEEEECCCCCccEEEe--------------cCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCC
Confidence 9999999999886543331 0146668999999999999999999999999999999998888 678
Q ss_pred CCC-eEEEEecCCCCCEEEEE---eCCCcEEEEeCcccCCCCce-eeee-ccccCCeEEEEecCCCCEEEE-EeCCCcEE
Q 015438 269 TSD-VNTVCFGDESGHLIYSG---SDDNLCKVWDRRCLNVKGKP-AGVL-MGHLEGITFIDSRGDGRYLIS-NGKDQAIK 341 (407)
Q Consensus 269 ~~~-v~~i~~s~~~~~~l~s~---~~d~~i~vwd~~~~~~~~~~-~~~~-~~~~~~i~~~~~s~~~~~l~s-~~~dg~i~ 341 (407)
.+. +.++.|+ +++.+|++| +.|+.|++||++ .... +... ..|...|.+++|+|++++|++ ++.||.|+
T Consensus 219 ~~~~~~~~~~~-~~~~~l~~g~~~~~d~~i~iwd~~----~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~ 293 (402)
T 2aq5_A 219 EGTRPVHAVFV-SEGKILTTGFSRMSERQVALWDTK----HLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIR 293 (402)
T ss_dssp CSSSCCEEEEC-STTEEEEEEECTTCCEEEEEEETT----BCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEE
T ss_pred CCCcceEEEEc-CCCcEEEEeccCCCCceEEEEcCc----cccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEE
Confidence 776 8999998 788899998 789999999998 3332 3332 257778999999999999975 55799999
Q ss_pred EEECCCCCCcccccCCCccccccceeeeCCCCCCccCCCCCcceEEEeCCcc
Q 015438 342 LWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSV 393 (407)
Q Consensus 342 iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~gh~~ 393 (407)
+||+++.+........+. +...+..+.|+|++.+++. .++.+++|+-++.
T Consensus 294 i~d~~~~~~~~~~l~~~~-~~~~v~~~~~sp~~~~~~s-~~~~~~~~~l~~~ 343 (402)
T 2aq5_A 294 YFEITSEAPFLHYLSMFS-SKESQRGMGYMPKRGLEVN-KCEIARFYKLHER 343 (402)
T ss_dssp EEEECSSTTCEEEEEEEC-CSSCCSEEEECCGGGSCGG-GTEEEEEEEEETT
T ss_pred EEEecCCCcceEeecccc-cCCcccceEEeccccccee-cceeEEEEEcCCC
Confidence 999998875222211122 4577899999999998876 4568999987764
No 53
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-33 Score=248.35 Aligned_cols=259 Identities=15% Similarity=0.151 Sum_probs=214.7
Q ss_pred CcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEE
Q 015438 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (407)
Q Consensus 117 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vw 196 (407)
...+.+|.+.|.+++| |++++|++++.||.|++||+.++..... ...|...|.+++|+|++++|++++.|+.|++|
T Consensus 11 ~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 86 (313)
T 3odt_A 11 SATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTV---VYTGQGFLNSVCYDSEKELLLFGGKDTMINGV 86 (313)
T ss_dssp EEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEE---EEECSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred HHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEE---eecCCccEEEEEECCCCCEEEEecCCCeEEEE
Confidence 4467899999999999 9999999999999999999988754443 33466789999999999999999999999999
Q ss_pred ECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEE
Q 015438 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVC 276 (407)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~ 276 (407)
++........... ..+|...|.++.| ++++|++++.||.|++|| .++.+..+..|...+.+++
T Consensus 87 ~~~~~~~~~~~~~-------------~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~ 149 (313)
T 3odt_A 87 PLFATSGEDPLYT-------------LIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAK 149 (313)
T ss_dssp ETTCCTTSCC-CE-------------ECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEE
T ss_pred EeeecCCCCcccc-------------hhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEE
Confidence 9976542221111 1246678999999 577999999999999999 6777888889999999999
Q ss_pred ecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeecc-ccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCccccc
Q 015438 277 FGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMG-HLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCN 355 (407)
Q Consensus 277 ~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 355 (407)
|+|.+++++++++.|+.|++||.. .....+.. |...|.+++|+|++. |++++.||.|++||+++++.+..+
T Consensus 150 ~~~~~~~~l~~~~~d~~i~i~d~~------~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~- 221 (313)
T 3odt_A 150 VVSFSENKFLTASADKTIKLWQND------KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTY- 221 (313)
T ss_dssp EEETTTTEEEEEETTSCEEEEETT------EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEE-
T ss_pred EccCCCCEEEEEECCCCEEEEecC------ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhh-
Confidence 997799999999999999999953 55666666 889999999999998 999999999999999998766553
Q ss_pred CCCccccccceeeeCCCCCCccCCCCCcceEEEeCCcc---------ceeeEEEeeCCCCC
Q 015438 356 LGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSV---------LRTLIRCHFSPVYR 407 (407)
Q Consensus 356 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~gh~~---------~~~~~~~~fsp~~~ 407 (407)
..+...+..+.|+|++++++.+.|+.|++|+-.+. ...+..+.|+|+.+
T Consensus 222 ---~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~ 279 (313)
T 3odt_A 222 ---EGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD 279 (313)
T ss_dssp ---ECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC
T ss_pred ---hcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC
Confidence 34566789999999998888888988888874321 12577889999864
No 54
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-32 Score=250.92 Aligned_cols=272 Identities=13% Similarity=0.042 Sum_probs=224.0
Q ss_pred ccccceeeeeccCCCCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCC
Q 015438 102 ADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQ 181 (407)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 181 (407)
.+....+|+....+....+.+|...|.+++|+|++++|++++.||.|++||+.++..+.... +...|.+++|+|++
T Consensus 52 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~~~~~ 127 (369)
T 3zwl_B 52 KDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK----SPVPVKRVEFSPCG 127 (369)
T ss_dssp SSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE----CSSCEEEEEECTTS
T ss_pred CCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee----cCCCeEEEEEccCC
Confidence 34456677776677777888999999999999999999999999999999999886665433 55579999999999
Q ss_pred CeEEEEeCC-----CeEEEEECCCCceeccccccccccceeeeecCCCCccc--cEEEEEEeCCCCEEEEeeCCCeEEEE
Q 015438 182 RHLVYASMS-----PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSF--GIFSLKFSTDGRELVAGSSDDCIYVY 254 (407)
Q Consensus 182 ~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~dg~i~i~ 254 (407)
++|++++.+ +.|.+||+...................+. .+.. .+.+++|+|++++|++++.||.|++|
T Consensus 128 ~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~ 202 (369)
T 3zwl_B 128 NYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKII-----THEGLDAATVAGWSTKGKYIIAGHKDGKISKY 202 (369)
T ss_dssp SEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEE-----CCTTCCCEEEEEECGGGCEEEEEETTSEEEEE
T ss_pred CEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeecc-----CCcCccceeEEEEcCCCCEEEEEcCCCEEEEE
Confidence 999999998 99999999876543222211111100111 2333 79999999999999999999999999
Q ss_pred EcCC-CeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEE
Q 015438 255 DLEA-NKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLIS 333 (407)
Q Consensus 255 d~~~-~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s 333 (407)
|+++ .+.+..+..|...|.+++|+ +++++|++++.|+.|++||++ .++.+..+. +...+..++|+|+++++++
T Consensus 203 d~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~v~d~~----~~~~~~~~~-~~~~~~~~~~~~~~~~l~~ 276 (369)
T 3zwl_B 203 DVSNNYEYVDSIDLHEKSISDMQFS-PDLTYFITSSRDTNSFLVDVS----TLQVLKKYE-TDCPLNTAVITPLKEFIIL 276 (369)
T ss_dssp ETTTTTEEEEEEECCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETT----TCCEEEEEE-CSSCEEEEEECSSSSEEEE
T ss_pred ECCCCcEeEEEEecCCCceeEEEEC-CCCCEEEEecCCceEEEEECC----CCceeeeec-CCCCceeEEecCCCceEEE
Confidence 9998 78888898999999999998 789999999999999999998 777777776 7788999999999999999
Q ss_pred EeCCC--------------cEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCCC-CCcceEEEeCCc
Q 015438 334 NGKDQ--------------AIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHP-CDQSVATYKGHS 392 (407)
Q Consensus 334 ~~~dg--------------~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~v~~~~gh~ 392 (407)
++.++ .+++||+.+.+....+ ..+...+..+.|+|++++|+++ .|+.|++|+-..
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 277 GGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRV----QGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp EECCC-------------CEEEEEETTTCCEEEEE----ECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred eecCCCceEEEEecCCCcceeEEEecCCCcchhhe----ecccCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 99988 8999999998776543 4456778999999999877655 689999998654
No 55
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.4e-33 Score=283.67 Aligned_cols=263 Identities=16% Similarity=0.216 Sum_probs=223.1
Q ss_pred CcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEE
Q 015438 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (407)
Q Consensus 117 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vw 196 (407)
...+.+|.+.|.+++|+|++++||+++.||.|+|||+.++..+.. ...|..+|.+++|+|++++|++++.||.|++|
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw 82 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRS---IQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEE---EECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEE---EecCCCcEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 456789999999999999999999999999999999999865554 34577789999999999999999999999999
Q ss_pred ECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCC-eeeeeeeccCCCeEEE
Q 015438 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN-KLSLRILAHTSDVNTV 275 (407)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~i 275 (407)
|+.+++...... +|...|.+++|+|++++|++++.||.|++||+.++ .....+..|...|.++
T Consensus 83 ~~~~~~~~~~~~----------------~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~ 146 (814)
T 3mkq_A 83 NYNTGEKVVDFE----------------AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCV 146 (814)
T ss_dssp ETTTCCEEEEEE----------------CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEE
T ss_pred ECCCCcEEEEEe----------------cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEE
Confidence 999887544332 36668999999999999999999999999999987 6777888999999999
Q ss_pred EecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeecccc-CCeEEEEecC--CCCEEEEEeCCCcEEEEECCCCCCcc
Q 015438 276 CFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHL-EGITFIDSRG--DGRYLISNGKDQAIKLWDIRKMSSNA 352 (407)
Q Consensus 276 ~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~-~~i~~~~~s~--~~~~l~s~~~dg~i~iwd~~~~~~~~ 352 (407)
+|+|.++++|++++.||.|++||++ .+.....+..+. ..+..++|+| ++.+|++++.||.|++||+++.+...
T Consensus 147 ~~~p~~~~~l~~~~~dg~v~vwd~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~ 222 (814)
T 3mkq_A 147 AFNPKDPSTFASGCLDRTVKVWSLG----QSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVA 222 (814)
T ss_dssp EEETTEEEEEEEEETTSEEEEEETT----CSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECC----CCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEE
Confidence 9995588999999999999999997 566666666554 8899999999 99999999999999999999877655
Q ss_pred cccCCCccccccceeeeCCCCCCccCCC-CCcceEEEeCCcc---------ceeeEEEeeCCCC
Q 015438 353 SCNLGFRSYEWDYRWMDYPPQARDLKHP-CDQSVATYKGHSV---------LRTLIRCHFSPVY 406 (407)
Q Consensus 353 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~v~~~~gh~~---------~~~~~~~~fsp~~ 406 (407)
.+ ..+...+..+.|+|++.+++++ .|+.|++|+..+. ...+..+.|+|+.
T Consensus 223 ~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 282 (814)
T 3mkq_A 223 TL----EGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTG 282 (814)
T ss_dssp EE----ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTC
T ss_pred EE----cCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCC
Confidence 43 3455678999999999776654 5788999985431 1357788889885
No 56
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.8e-33 Score=257.33 Aligned_cols=266 Identities=16% Similarity=0.167 Sum_probs=211.0
Q ss_pred ccccCCCceEEEEECCC----CCEEEEEeCCCeEEEEEcCCCeEEeEeee--ccccceEEEEEEECCC----CCeEEEEe
Q 015438 119 PVDQTTSRAYVSQFSAD----GSLFVAGFQASQIRIYDVERGWKIQKDIL--AKSLRWTVTDTSLSPD----QRHLVYAS 188 (407)
Q Consensus 119 ~~~~h~~~v~~~~~s~~----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~v~~~~~sp~----~~~l~~~~ 188 (407)
...+|.++|.+++|+|+ ...+++++.++.|++||+.++..+..... ...|...|.+++|+|+ +++|++++
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 34589999999999984 45677777778999999987655444332 2236678999999998 67999999
Q ss_pred CCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeC-CCCEEEEeeCCCeEEEEEcCCCeeeeee--
Q 015438 189 MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSDDCIYVYDLEANKLSLRI-- 265 (407)
Q Consensus 189 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~-- 265 (407)
.||.|++||+.+++....+. +|...|.+++|+| ++++|++|+.||.|++||+++++.+..+
T Consensus 93 ~dg~i~v~d~~~~~~~~~~~----------------~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 156 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHYV----------------GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGG 156 (366)
T ss_dssp TTCEEEEECTTTCCEEEEEE----------------SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECS
T ss_pred CCCEEEEEEchhceEeeeec----------------CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecc
Confidence 99999999999876644332 3666899999999 8999999999999999999999988887
Q ss_pred -eccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeee----------------------------cccc
Q 015438 266 -LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVL----------------------------MGHL 316 (407)
Q Consensus 266 -~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~----------------------------~~~~ 316 (407)
..|...|.+++|+ +++++|++++.|+.|++||++ .++.+..+ .+|.
T Consensus 157 ~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~i~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (366)
T 3k26_A 157 VEGHRDEVLSADYD-LLGEKIMSCGMDHSLKLWRIN----SKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHR 231 (366)
T ss_dssp TTSCSSCEEEEEEC-TTSSEEEEEETTSCEEEEESC----SHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCS
T ss_pred cccccCceeEEEEC-CCCCEEEEecCCCCEEEEECC----CCccccccceeEEecCCCCcccccceeeccCccccccCCc
Confidence 6899999999998 789999999999999999998 44433333 3389
Q ss_pred CCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCccccc----------CCCccccccceeeeCCCC--CCccCC-CCCc
Q 015438 317 EGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCN----------LGFRSYEWDYRWMDYPPQ--ARDLKH-PCDQ 383 (407)
Q Consensus 317 ~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----------~~~~~~~~~v~~~~~~~~--~~~l~~-~~~~ 383 (407)
..|.+++|+ +++|++++.|+.|++||+++........ .....+...+..+.|+|+ +++|++ ..|+
T Consensus 232 ~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg 309 (366)
T 3k26_A 232 NYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVG 309 (366)
T ss_dssp SCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTS
T ss_pred ceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCC
Confidence 999999998 7799999999999999999876522211 112334456888999998 887775 4578
Q ss_pred ceEEEeCCc---------------cceeeEEEeeCCCCC
Q 015438 384 SVATYKGHS---------------VLRTLIRCHFSPVYR 407 (407)
Q Consensus 384 ~v~~~~gh~---------------~~~~~~~~~fsp~~~ 407 (407)
.|++|+-.+ ....+..+.|+|+.+
T Consensus 310 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 348 (366)
T 3k26_A 310 KLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSS 348 (366)
T ss_dssp CEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSS
T ss_pred cEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCC
Confidence 888886432 134688899999864
No 57
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.6e-33 Score=262.10 Aligned_cols=262 Identities=12% Similarity=0.163 Sum_probs=194.3
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeE--------EeEeeeccccc------------eEEEEEEECCCC
Q 015438 122 QTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWK--------IQKDILAKSLR------------WTVTDTSLSPDQ 181 (407)
Q Consensus 122 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~--------~~~~~~~~~~~------------~~v~~~~~sp~~ 181 (407)
.+.+.|.+++|+|+|++||+|+.||.|+||++.++.. ........+|. ..|++++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 4678999999999999999999999999999987642 11122344565 679999999998
Q ss_pred --CeEEEEeCCCeEEEEECCCCceecccccccccc----------ceee--------------eecCCCCccccEEEEEE
Q 015438 182 --RHLVYASMSPIVHIVDVGSGTMESLANVTEIHD----------GLDF--------------SAADDGGYSFGIFSLKF 235 (407)
Q Consensus 182 --~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~----------~~~~--------------~~~~~~~~~~~v~~~~~ 235 (407)
..|++++.|+.|++||+.++............. .+.+ ......+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 799999999999999997644321000000000 0000 00112468889999999
Q ss_pred eCCCCEEEEeeCCCeEEEEEcCC-Ceeee-------eeeccCCCeEEEEecCCCC-CEEEEEeCCCcEEEEeCcccCCCC
Q 015438 236 STDGRELVAGSSDDCIYVYDLEA-NKLSL-------RILAHTSDVNTVCFGDESG-HLIYSGSDDNLCKVWDRRCLNVKG 306 (407)
Q Consensus 236 s~~~~~l~~~~~dg~i~i~d~~~-~~~~~-------~~~~~~~~v~~i~~s~~~~-~~l~s~~~d~~i~vwd~~~~~~~~ 306 (407)
+|++++|++| .|+.|++||+++ ++.+. .+..|...|.+++|+ +++ ++|++|+.||.|++||++ .+
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~l~s~~~dg~i~iwd~~----~~ 259 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFH-PNSCNTFVYSSSKGTIRLCDMR----AS 259 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEEC-SSCTTEEEEEETTSCEEEEETT----TC
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEEC-CCCCcEEEEEeCCCeEEEEECc----CC
Confidence 9999999998 799999999984 44443 356899999999998 555 999999999999999998 44
Q ss_pred ce----eeeeccccC------------CeEEEEecCCCCEEEEEeCCCcEEEEECCC-CCCcccccCCCcc---------
Q 015438 307 KP----AGVLMGHLE------------GITFIDSRGDGRYLISNGKDQAIKLWDIRK-MSSNASCNLGFRS--------- 360 (407)
Q Consensus 307 ~~----~~~~~~~~~------------~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~--------- 360 (407)
.. +..+.+|.. .|++++|+|+|++|++++. +.|++||+++ .+.+..+.. +..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~-~~~~~~~l~~~~ 337 (447)
T 3dw8_B 260 ALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQV-HEYLRSKLCSLY 337 (447)
T ss_dssp SSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEES-CGGGTTTHHHHH
T ss_pred ccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeec-cccccccccccc
Confidence 44 677777775 8999999999999999998 9999999997 655554432 111
Q ss_pred ---ccccceeeeCCCCCCccC-CCCCcceEEEeCC
Q 015438 361 ---YEWDYRWMDYPPQARDLK-HPCDQSVATYKGH 391 (407)
Q Consensus 361 ---~~~~v~~~~~~~~~~~l~-~~~~~~v~~~~gh 391 (407)
...++..+.|+|++++|+ .+.|+.|++|+-.
T Consensus 338 ~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~ 372 (447)
T 3dw8_B 338 ENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRN 372 (447)
T ss_dssp HTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETT
T ss_pred cccccccceEEEECCCCCEEEEeccCCEEEEEEcC
Confidence 111233489999998665 4568999999854
No 58
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=5e-34 Score=261.11 Aligned_cols=267 Identities=14% Similarity=0.148 Sum_probs=212.7
Q ss_pred cceeeeeccCCCCcccc-----cCCCceEEEEECCC----CCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEE
Q 015438 105 CHMLSRYLPVNGPWPVD-----QTTSRAYVSQFSAD----GSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDT 175 (407)
Q Consensus 105 ~~~~~~~~~~~~~~~~~-----~h~~~v~~~~~s~~----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~ 175 (407)
...+|.....+....+. .|...|.+++|+|+ +++|++|+.||.|++||+.++..+.. ...|...|.++
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~---~~~~~~~i~~~ 121 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKH---YVGHGNAINEL 121 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEE---EESCCSCEEEE
T ss_pred EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeee---ecCCCCcEEEE
Confidence 34455554444434443 26688999999999 67999999999999999998865544 34677789999
Q ss_pred EECC-CCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEE
Q 015438 176 SLSP-DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVY 254 (407)
Q Consensus 176 ~~sp-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~ 254 (407)
+|+| ++++|++++.||.|++||+.+++....... ..+|...|.+++|+|++++|++++.||.|++|
T Consensus 122 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-------------~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~ 188 (366)
T 3k26_A 122 KFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGG-------------VEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 188 (366)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTTTEEEEEECS-------------TTSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecc-------------cccccCceeEEEECCCCCEEEEecCCCCEEEE
Confidence 9999 899999999999999999998765443321 12466789999999999999999999999999
Q ss_pred EcCCCeeeeeeec----------------------------cCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCC--
Q 015438 255 DLEANKLSLRILA----------------------------HTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNV-- 304 (407)
Q Consensus 255 d~~~~~~~~~~~~----------------------------~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~-- 304 (407)
|+++++.+..+.. |...|.+++|+ +++|++++.|+.|++||++....
T Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~ 265 (366)
T 3k26_A 189 RINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL---GDLILSKSCENAIVCWKPGKMEDDI 265 (366)
T ss_dssp ESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE---TTEEEEECSSSEEEEEEESSTTCCG
T ss_pred ECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc---CCEEEEEecCCEEEEEeCCCccccc
Confidence 9998765544433 89999999997 67999999999999999973211
Q ss_pred --------CCceeeeeccccCCeEEEEecCC--CCEEEEEeCCCcEEEEECCCCCCcccccCCCccc--cccceeeeCCC
Q 015438 305 --------KGKPAGVLMGHLEGITFIDSRGD--GRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSY--EWDYRWMDYPP 372 (407)
Q Consensus 305 --------~~~~~~~~~~~~~~i~~~~~s~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~v~~~~~~~ 372 (407)
....+..+.+|...|++++|+|+ +++|++++.||.|++||+++++...........+ ...+..+.|+|
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 345 (366)
T 3k26_A 266 DKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSR 345 (366)
T ss_dssp GGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECT
T ss_pred cccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCC
Confidence 11347778889999999999999 9999999999999999999987654222222333 67899999999
Q ss_pred CCCccCC-CCCcceEEEeC
Q 015438 373 QARDLKH-PCDQSVATYKG 390 (407)
Q Consensus 373 ~~~~l~~-~~~~~v~~~~g 390 (407)
++++|++ +.|+.|++|+-
T Consensus 346 ~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 346 DSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp TSSEEEEEETTSEEEEEEC
T ss_pred CCCeEEEEeCCCEEEEEEe
Confidence 9987765 46789999974
No 59
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.2e-33 Score=258.13 Aligned_cols=243 Identities=17% Similarity=0.247 Sum_probs=193.1
Q ss_pred ccCCCceEEEEECCCCC-EEEEEeCCCeEEEEEc----CCCeE------EeEeee-cc------ccceEEEEEEECCCCC
Q 015438 121 DQTTSRAYVSQFSADGS-LFVAGFQASQIRIYDV----ERGWK------IQKDIL-AK------SLRWTVTDTSLSPDQR 182 (407)
Q Consensus 121 ~~h~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~----~~~~~------~~~~~~-~~------~~~~~v~~~~~sp~~~ 182 (407)
..|.+.|.+++|+|+++ +||+|+.||.|++|++ .++.. ...... .. .|...|++++|+|+++
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 34568999999999999 9999999999999999 87752 222111 11 1566899999999999
Q ss_pred eEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeee
Q 015438 183 HLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLS 262 (407)
Q Consensus 183 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~ 262 (407)
+|++++.||.|++||. ++....... +|...|.+++|+|++++|++++.|+.|++||+.+++.+
T Consensus 122 ~l~~~~~dg~i~i~~~-~~~~~~~~~----------------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 184 (425)
T 1r5m_A 122 SIVTGVENGELRLWNK-TGALLNVLN----------------FHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVM 184 (425)
T ss_dssp EEEEEETTSCEEEEET-TSCEEEEEC----------------CCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEE
T ss_pred EEEEEeCCCeEEEEeC-CCCeeeecc----------------CCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEE
Confidence 9999999999999994 333322211 35668999999999999999999999999998776543
Q ss_pred e--------------------------------------------------------eeeccCCCeEEEEecCCCCCEEE
Q 015438 263 L--------------------------------------------------------RILAHTSDVNTVCFGDESGHLIY 286 (407)
Q Consensus 263 ~--------------------------------------------------------~~~~~~~~v~~i~~s~~~~~~l~ 286 (407)
. .+..|...|.+++|+ +++++|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~ 263 (425)
T 1r5m_A 185 QHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFN-DTNKLLL 263 (425)
T ss_dssp EEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEE-TTTTEEE
T ss_pred EEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEEC-CCCCEEE
Confidence 3 333577889999998 7888999
Q ss_pred EEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccce
Q 015438 287 SGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYR 366 (407)
Q Consensus 287 s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~ 366 (407)
+++.|+.|++||++ .++.+..+.+|...|.+++|+|++ +|++++.|+.|++||+++++....+ ..+...+.
T Consensus 264 ~~~~d~~i~i~d~~----~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~----~~~~~~i~ 334 (425)
T 1r5m_A 264 SASDDGTLRIWHGG----NGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALS----IVDGVPIF 334 (425)
T ss_dssp EEETTSCEEEECSS----SBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEE----ECTTCCEE
T ss_pred EEcCCCEEEEEECC----CCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEec----ccCCccEE
Confidence 99999999999998 778888898999999999999999 9999999999999999987765543 33456788
Q ss_pred eeeCCCCCCccCCC-CCcceEEEeC
Q 015438 367 WMDYPPQARDLKHP-CDQSVATYKG 390 (407)
Q Consensus 367 ~~~~~~~~~~l~~~-~~~~v~~~~g 390 (407)
.+.|+|++++|+++ .|+.|.+|+-
T Consensus 335 ~~~~s~~~~~l~~~~~dg~i~i~~~ 359 (425)
T 1r5m_A 335 AGRISQDGQKYAVAFMDGQVNVYDL 359 (425)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEEC
T ss_pred EEEEcCCCCEEEEEECCCeEEEEEC
Confidence 99999999887765 4666666653
No 60
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4e-33 Score=257.33 Aligned_cols=263 Identities=11% Similarity=0.075 Sum_probs=207.4
Q ss_pred cccceeeeeccCCCCcccc--cCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECC
Q 015438 103 DCCHMLSRYLPVNGPWPVD--QTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (407)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp 179 (407)
+....+|+.........+. +|...|.+++|+| ++++|++++.|+.|++||+.+. ..........+...|.+++|+|
T Consensus 95 dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~ 173 (383)
T 3ei3_B 95 GGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGS-VIQVFAKTDSWDYWYCCVDVSV 173 (383)
T ss_dssp TSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSC-EEEEEECCCCSSCCEEEEEEET
T ss_pred CCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCC-ceEEEeccCCCCCCeEEEEECC
Confidence 4455566665544444443 6999999999999 7899999999999999999863 4444444455567899999999
Q ss_pred CCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCC-EEEEeeCCCeEEEEEcCC
Q 015438 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR-ELVAGSSDDCIYVYDLEA 258 (407)
Q Consensus 180 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~ 258 (407)
++++|++++.|+.|++||++ ++...... +|...|.+++|+|+++ +|++++.|+.|++||+++
T Consensus 174 ~~~~l~~~~~d~~i~i~d~~-~~~~~~~~----------------~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 174 SRQMLATGDSTGRLLLLGLD-GHEIFKEK----------------LHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp TTTEEEEEETTSEEEEEETT-SCEEEEEE----------------CSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred CCCEEEEECCCCCEEEEECC-CCEEEEec----------------cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 99999999999999999994 33222111 3666899999999998 999999999999999998
Q ss_pred ----CeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeecccc-----------------C
Q 015438 259 ----NKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHL-----------------E 317 (407)
Q Consensus 259 ----~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~-----------------~ 317 (407)
+..+..+ .|...|.+++|+|.++++|++++.|+.|++||++ .+.....+.+|. .
T Consensus 237 ~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 311 (383)
T 3ei3_B 237 IKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSY----DWSKPDQIIIHPHRQFQHLTPIKATWHPMY 311 (383)
T ss_dssp CCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETT----BTTSCSEEEECCBCCCTTSCCCCCEECSSS
T ss_pred CCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECC----CCccccccccccccccccccceEEeccCCC
Confidence 5566656 7999999999984389999999999999999998 555555554432 3
Q ss_pred CeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCCCCCcceEEEeCCc
Q 015438 318 GITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHS 392 (407)
Q Consensus 318 ~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~gh~ 392 (407)
.+..++|+|++++ +++.|+.|++||+++++.+..+.. ..+...+..++|+|++++|++++|+.|++|+-.+
T Consensus 312 ~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~--~~~~~~~~~~~~s~~g~~l~s~sd~~i~iw~~~~ 382 (383)
T 3ei3_B 312 DLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRD--PNAAGIISLNKFSPTGDVLASGMGFNILIWNRED 382 (383)
T ss_dssp SEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECB--TTBCSCCCEEEECTTSSEEEEEETTEEEEEECC-
T ss_pred CceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecC--CCCCceEEEEEEecCccEEEEecCCcEEEEecCC
Confidence 4555777788777 788999999999999887665422 1234567778999999999988899999998643
No 61
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=7.1e-33 Score=254.22 Aligned_cols=270 Identities=10% Similarity=0.035 Sum_probs=216.1
Q ss_pred cccceeeeeccCC--CCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCC
Q 015438 103 DCCHMLSRYLPVN--GPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD 180 (407)
Q Consensus 103 ~~~~~~~~~~~~~--~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 180 (407)
+....+|.....+ ....+.+|...|.+++|+|++++|++++.|+.|++||+.++..... .....|...|.+++|+|+
T Consensus 29 d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~-~~~~~~~~~v~~~~~~~~ 107 (372)
T 1k8k_C 29 NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPT-LVILRINRAARCVRWAPN 107 (372)
T ss_dssp SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEE-EECCCCSSCEEEEEECTT
T ss_pred CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeee-EEeecCCCceeEEEECCC
Confidence 4445566655544 5667789999999999999999999999999999999988753333 334557778999999999
Q ss_pred CCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEc----
Q 015438 181 QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDL---- 256 (407)
Q Consensus 181 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~---- 256 (407)
+++|++++.|+.|++||+..+........ ...+|...|.+++|+|++++|++++.||.|++||+
T Consensus 108 ~~~l~~~~~d~~v~i~d~~~~~~~~~~~~------------~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 175 (372)
T 1k8k_C 108 EKKFAVGSGSRVISICYFEQENDWWVCKH------------IKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKE 175 (372)
T ss_dssp SSEEEEEETTSSEEEEEEETTTTEEEEEE------------ECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTT
T ss_pred CCEEEEEeCCCEEEEEEecCCCcceeeee------------eecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEccccc
Confidence 99999999999999999987653211110 01245668999999999999999999999999995
Q ss_pred --------------CCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEE
Q 015438 257 --------------EANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFI 322 (407)
Q Consensus 257 --------------~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~ 322 (407)
..++.+..+..|...|.+++|+ +++++|++++.|+.|++||++ .++++..+..|..+|+++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~i~d~~----~~~~~~~~~~~~~~v~~~ 250 (372)
T 1k8k_C 176 VEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS-ANGSRVAWVSHDSTVCLADAD----KKMAVATLASETLPLLAV 250 (372)
T ss_dssp TSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC-SSSSEEEEEETTTEEEEEEGG----GTTEEEEEECSSCCEEEE
T ss_pred ccccccccccccccchhhheEecCCCCCeEEEEEEC-CCCCEEEEEeCCCEEEEEECC----CCceeEEEccCCCCeEEE
Confidence 4677888888999999999998 788999999999999999998 788999999999999999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCC--CC--Ccc--------------------------cc-------cCCCccccccc
Q 015438 323 DSRGDGRYLISNGKDQAIKLWDIRK--MS--SNA--------------------------SC-------NLGFRSYEWDY 365 (407)
Q Consensus 323 ~~s~~~~~l~s~~~dg~i~iwd~~~--~~--~~~--------------------------~~-------~~~~~~~~~~v 365 (407)
+|+|++.+|+++ .|+.|++||++. ++ ... .. ..-...+...|
T Consensus 251 ~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 329 (372)
T 1k8k_C 251 TFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSV 329 (372)
T ss_dssp EEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCE
T ss_pred EEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCc
Confidence 999999988877 899999999988 31 000 00 01023566788
Q ss_pred eeeeC-CCCC----CccCCCCCcceEEEeCC
Q 015438 366 RWMDY-PPQA----RDLKHPCDQSVATYKGH 391 (407)
Q Consensus 366 ~~~~~-~~~~----~~l~~~~~~~v~~~~gh 391 (407)
..+++ ++++ .+++++.|+.|++|+-.
T Consensus 330 ~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 330 SQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp EEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred ceeEEecCCCcceeeEEEecCCCceEEEEec
Confidence 88874 5775 44456679999999854
No 62
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1e-33 Score=262.29 Aligned_cols=277 Identities=14% Similarity=0.125 Sum_probs=217.6
Q ss_pred ccccceeeeeccCC------CCcccccCCCceEEEEECCC----C---CEEEEEeCCCeEEEEEcCCCeE-----EeEee
Q 015438 102 ADCCHMLSRYLPVN------GPWPVDQTTSRAYVSQFSAD----G---SLFVAGFQASQIRIYDVERGWK-----IQKDI 163 (407)
Q Consensus 102 ~~~~~~~~~~~~~~------~~~~~~~h~~~v~~~~~s~~----~---~~l~~~~~dg~i~iwd~~~~~~-----~~~~~ 163 (407)
.+....+|.....+ ....+.+|...|.+++|+|+ + ++|++++.|+.|++|++.++.. ...
T Consensus 34 ~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~-- 111 (397)
T 1sq9_A 34 GDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEK-- 111 (397)
T ss_dssp TTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEE--
T ss_pred CCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccccccccee--
Confidence 34455566665554 46677899999999999999 9 9999999999999999987653 333
Q ss_pred ecccc-----ceEEEEEEEC----CCCCe-EEEEeCCCeEEEEECCC------CceeccccccccccceeeeecCCCCcc
Q 015438 164 LAKSL-----RWTVTDTSLS----PDQRH-LVYASMSPIVHIVDVGS------GTMESLANVTEIHDGLDFSAADDGGYS 227 (407)
Q Consensus 164 ~~~~~-----~~~v~~~~~s----p~~~~-l~~~~~dg~i~vwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (407)
...| ...|.+++|+ |++++ |++++.||.|++||+.+ +........... .........|.
T Consensus 112 -~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 186 (397)
T 1sq9_A 112 -LDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLEL----QGTVESPMTPS 186 (397)
T ss_dssp -ECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEE----EEEECCSSSSC
T ss_pred -ecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCccee----eeeeccccCCC
Confidence 3334 4789999999 99999 99999999999999987 433221100000 00000012356
Q ss_pred ccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeec---c---CCCeEEEEecCCCCCEEEEEeCC---CcEEEEe
Q 015438 228 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA---H---TSDVNTVCFGDESGHLIYSGSDD---NLCKVWD 298 (407)
Q Consensus 228 ~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~---~~~v~~i~~s~~~~~~l~s~~~d---~~i~vwd 298 (407)
..|.+++|+|++ +|++++.||.|++||+++++.+..+.. | ...|.+++|+ +++++|++++.| +.|++||
T Consensus 187 ~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~-~~~~~l~~~~~d~~~g~i~i~d 264 (397)
T 1sq9_A 187 QFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS-PQGSLLAIAHDSNSFGCITLYE 264 (397)
T ss_dssp CCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC-SSTTEEEEEEEETTEEEEEEEE
T ss_pred CCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEEC-CCCCEEEEEecCCCCceEEEEE
Confidence 689999999999 999999999999999999999999988 8 9999999998 789999999999 9999999
Q ss_pred CcccCCCCceeeeecc-------------ccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCc--cc--
Q 015438 299 RRCLNVKGKPAGVLMG-------------HLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFR--SY-- 361 (407)
Q Consensus 299 ~~~~~~~~~~~~~~~~-------------~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--~~-- 361 (407)
++ .++++..+.+ |...|.+++|+|++++|++++.||.|++||+++++.+..+..... .+
T Consensus 265 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 340 (397)
T 1sq9_A 265 TE----FGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEE 340 (397)
T ss_dssp TT----TCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGG
T ss_pred CC----CCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchh
Confidence 98 7888889988 999999999999999999999999999999999877666541100 22
Q ss_pred -------------cccceeeeCCCCC-----------CccCCCCCcceEEEeCC
Q 015438 362 -------------EWDYRWMDYPPQA-----------RDLKHPCDQSVATYKGH 391 (407)
Q Consensus 362 -------------~~~v~~~~~~~~~-----------~~l~~~~~~~v~~~~gh 391 (407)
...+..+.|+|++ .+++.+.|+.|++|+-.
T Consensus 341 ~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 341 DILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp GCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred hhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcC
Confidence 6788999999997 34445678899998743
No 63
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.3e-32 Score=245.00 Aligned_cols=230 Identities=15% Similarity=0.183 Sum_probs=181.1
Q ss_pred ccccceeeeecc--CCCCcccccCCCceEEEEECCC--CCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEE
Q 015438 102 ADCCHMLSRYLP--VNGPWPVDQTTSRAYVSQFSAD--GSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSL 177 (407)
Q Consensus 102 ~~~~~~~~~~~~--~~~~~~~~~h~~~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~ 177 (407)
.+....+|.... .+....+.+|.++|.+++|+|+ +++|++|+.|+.|+|||+.++... .......|...|.+++|
T Consensus 29 ~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~-~~~~~~~h~~~v~~v~~ 107 (297)
T 2pm7_B 29 SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWS-QIAVHAVHSASVNSVQW 107 (297)
T ss_dssp TTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBC-CCEEECCCSSCEEEEEE
T ss_pred CCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceE-EEEEeecCCCceeEEEe
Confidence 345555665542 2445678999999999999874 899999999999999999876311 12234567778999999
Q ss_pred CCC--CCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCC-------------CCEE
Q 015438 178 SPD--QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-------------GREL 242 (407)
Q Consensus 178 sp~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-------------~~~l 242 (407)
+|+ +.+|++++.|+.|++||+.++....... ..+|...|.+++|+|+ +++|
T Consensus 108 ~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~--------------~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l 173 (297)
T 2pm7_B 108 APHEYGPMLLVASSDGKVSVVEFKENGTTSPII--------------IDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 173 (297)
T ss_dssp CCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEE--------------EECCSSCEEEEEECCCC------------CCEE
T ss_pred CcCCCCcEEEEEECCCcEEEEEecCCCceeeee--------------eecccCccceEeecCCcccccccCCCCCCcceE
Confidence 997 8899999999999999998653211110 1146678999999997 5799
Q ss_pred EEeeCCCeEEEEEcCCCe----eeeeeeccCCCeEEEEecCCC--CCEEEEEeCCCcEEEEeCcccCCCCceeeee--cc
Q 015438 243 VAGSSDDCIYVYDLEANK----LSLRILAHTSDVNTVCFGDES--GHLIYSGSDDNLCKVWDRRCLNVKGKPAGVL--MG 314 (407)
Q Consensus 243 ~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~v~~i~~s~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~--~~ 314 (407)
++|+.|++|++||+++++ ....+.+|...|.+++|+|.. +.+|++++.|++|++||++..... .....+ ..
T Consensus 174 ~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~-~~~~~~~~~~ 252 (297)
T 2pm7_B 174 VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGP-WKKTLLKEEK 252 (297)
T ss_dssp EEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC-CEEEESSSSC
T ss_pred EEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCc-cceeeeeccc
Confidence 999999999999998765 556788999999999999442 589999999999999999732100 111223 46
Q ss_pred ccCCeEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 015438 315 HLEGITFIDSRGDGRYLISNGKDQAIKLWDIRK 347 (407)
Q Consensus 315 ~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 347 (407)
|...|.+++|+|+|++|++++.|+.|++|+...
T Consensus 253 ~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 253 FPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp CSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred CCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 788999999999999999999999999999864
No 64
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-33 Score=269.66 Aligned_cols=270 Identities=10% Similarity=-0.000 Sum_probs=198.9
Q ss_pred CCCceEEEEECCCC---------CEEEE-------------------EeCCCeEEEEEcCCCeEEeE-eeeccccceEEE
Q 015438 123 TTSRAYVSQFSADG---------SLFVA-------------------GFQASQIRIYDVERGWKIQK-DILAKSLRWTVT 173 (407)
Q Consensus 123 h~~~v~~~~~s~~~---------~~l~~-------------------~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~v~ 173 (407)
+.+.|.+++|+|++ ++||+ ++.|+.|+||++.++..... ......|...|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 56778888888775 55655 55788999999987643211 112334556799
Q ss_pred EEEECCC------CCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC
Q 015438 174 DTSLSPD------QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS 247 (407)
Q Consensus 174 ~~~~sp~------~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 247 (407)
+++|+|+ +.+||+++.||+|++||+..+............... ...+|...|.+++|++++ .|++|+.
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~-----~l~~h~~~v~sv~~s~~~-~lasgs~ 285 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSL-----TLSLADSLITTFDFLSPT-TVVCGFK 285 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSE-----EECCTTTCEEEEEESSSS-EEEEEET
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceE-----EEEcCCCCEEEEEecCCC-eEEEEeC
Confidence 9999996 579999999999999999876432100000000000 112467799999999864 8999999
Q ss_pred CCeEEEEEcCCCe-eeeeeeccCCCeEEE--EecCCCC-CEEEEEeCCCcEEEEeCcccCCCCceeeeeccccC--CeEE
Q 015438 248 DDCIYVYDLEANK-LSLRILAHTSDVNTV--CFGDESG-HLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLE--GITF 321 (407)
Q Consensus 248 dg~i~i~d~~~~~-~~~~~~~~~~~v~~i--~~s~~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~--~i~~ 321 (407)
||+|++||+++++ +...+.+|...|.+| .|+ +++ ++|++|+.|++|+|||++ .++++..+.+|.. .|.+
T Consensus 286 DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s-~~g~~~laS~S~D~tvklWD~~----~~~~~~~~~~~~~~~~v~~ 360 (524)
T 2j04_B 286 NGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYS-DFEDTVVSTVAVDGYFYIFNPK----DIATTKTTVSRFRGSNLVP 360 (524)
T ss_dssp TSEEEEEETTBCSSCSEEEECSSSCEEEEEEECC-TTSCCEEEEEETTSEEEEECGG----GHHHHCEEEEECSCCSCCC
T ss_pred CCEEEEEECCCCCCceEEeecccccEEEEEEEcC-CCCCeEEEEeccCCeEEEEECC----CCCcccccccccccCcccc
Confidence 9999999999764 455688999999999 454 776 899999999999999998 6677767777754 5889
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCC-CCCcceEEEeC-------Ccc
Q 015438 322 IDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKH-PCDQSVATYKG-------HSV 393 (407)
Q Consensus 322 ~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~v~~~~g-------h~~ 393 (407)
++|+|++..|++++.|++|++||++++..+..+ ..+...|..++|+|++++|++ +.|+.|++|+- |..
T Consensus 361 v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l----~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~ 436 (524)
T 2j04_B 361 VVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPL----VSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKN 436 (524)
T ss_dssp EEEETTTTEEEEECSSSEEEEEETTCTTCCEEE----EECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC--
T ss_pred eEeCCCcCeEEEeCCCCcEEEEECcccccceee----ecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhcccccc
Confidence 999999999999999999999999997765543 346678999999999987765 46899999863 221
Q ss_pred c------eeeEEEeeCCCCC
Q 015438 394 L------RTLIRCHFSPVYR 407 (407)
Q Consensus 394 ~------~~~~~~~fsp~~~ 407 (407)
. ..+..+.|||+.+
T Consensus 437 ~~~~~~~~~v~~v~~sp~g~ 456 (524)
T 2j04_B 437 SSATQKSLRLWKWDYSIKDD 456 (524)
T ss_dssp ----CCCCEEEECBCCSSSC
T ss_pred CccceeeeEEEEeccCCCCC
Confidence 1 1356899999863
No 65
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-32 Score=256.41 Aligned_cols=253 Identities=15% Similarity=0.188 Sum_probs=206.7
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCc
Q 015438 123 TTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGT 202 (407)
Q Consensus 123 h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~ 202 (407)
|.+.|.+++|+|++++|++++.||.|++||. ++..+. ....|...|.+++|+|++++|++++.|+.|++||+.+++
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~-~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 182 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNK-TGALLN---VLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGT 182 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEE---EECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeC-CCCeee---eccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCc
Confidence 7889999999999999999999999999994 443433 345677789999999999999999999999999998876
Q ss_pred eeccccccccc----------------cceeeee------------------------cCCCCccccEEEEEEeCCCCEE
Q 015438 203 MESLANVTEIH----------------DGLDFSA------------------------ADDGGYSFGIFSLKFSTDGREL 242 (407)
Q Consensus 203 ~~~~~~~~~~~----------------~~~~~~~------------------------~~~~~~~~~v~~~~~s~~~~~l 242 (407)
........... ..+.+.. ....+|...|.+++|+|++++|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 262 (425)
T 1r5m_A 183 VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLL 262 (425)
T ss_dssp EEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEE
T ss_pred EEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEE
Confidence 65433222111 0000000 0112577889999999999999
Q ss_pred EEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEE
Q 015438 243 VAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFI 322 (407)
Q Consensus 243 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~ 322 (407)
++++.|+.|++||+++++.+..+..|...|.+++|+ +++ ++++++.|+.|++||++ .++.+..+..|...|+++
T Consensus 263 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~-~~~-~l~~~~~d~~i~i~d~~----~~~~~~~~~~~~~~i~~~ 336 (425)
T 1r5m_A 263 LSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWV-GDD-KVISCSMDGSVRLWSLK----QNTLLALSIVDGVPIFAG 336 (425)
T ss_dssp EEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEE-TTT-EEEEEETTSEEEEEETT----TTEEEEEEECTTCCEEEE
T ss_pred EEEcCCCEEEEEECCCCccceEecCCCccEEEEEEC-CCC-EEEEEeCCCcEEEEECC----CCcEeEecccCCccEEEE
Confidence 999999999999999999999998999999999998 566 99999999999999998 788899999999999999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCCC--------------------CcccccCCCccccc--cceeeeCCCCCCccC-C
Q 015438 323 DSRGDGRYLISNGKDQAIKLWDIRKMS--------------------SNASCNLGFRSYEW--DYRWMDYPPQARDLK-H 379 (407)
Q Consensus 323 ~~s~~~~~l~s~~~dg~i~iwd~~~~~--------------------~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~-~ 379 (407)
+|+|++++|++++.||.|++||+++.+ .+.. ...+.. .+..+.|+|++++|+ .
T Consensus 337 ~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~s~~~~~l~~~ 412 (425)
T 1r5m_A 337 RISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYAS----YQSSQDNDYIFDLSWNCAGNKISVA 412 (425)
T ss_dssp EECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEE----ECCTTCCCCEEEEEECTTSSEEEEE
T ss_pred EEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhh----hcCcccCCceEEEEccCCCceEEEE
Confidence 999999999999999999999999876 2222 223322 788999999998774 5
Q ss_pred CCCcceEEEe
Q 015438 380 PCDQSVATYK 389 (407)
Q Consensus 380 ~~~~~v~~~~ 389 (407)
+.|+.|++|+
T Consensus 413 ~~dg~i~iw~ 422 (425)
T 1r5m_A 413 YSLQEGSVVA 422 (425)
T ss_dssp ESSSCCEEEE
T ss_pred ecCceEEEEe
Confidence 5778888886
No 66
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.3e-33 Score=253.02 Aligned_cols=265 Identities=15% Similarity=0.147 Sum_probs=208.0
Q ss_pred ccccCCCceEEEEECCCCCEEE-EEeC---CCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCC---CCeEEEEeCCC
Q 015438 119 PVDQTTSRAYVSQFSADGSLFV-AGFQ---ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD---QRHLVYASMSP 191 (407)
Q Consensus 119 ~~~~h~~~v~~~~~s~~~~~l~-~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~---~~~l~~~~~dg 191 (407)
.+.+|...|.+++|+|++..++ +|+. |+.|+|||+.++...... ...|...|.+++|+|+ +++|++++.||
T Consensus 13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLR--EIEKAKPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEE--EEEESSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred hccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCccccee--eecccCcEEEEEEcCCCCCCceEEEecCCC
Confidence 4567999999999999997655 5554 899999999987544332 2256778999999998 69999999999
Q ss_pred eEEEEECCCCc-eeccccccccccceeeeecCCCCccccEEEEEE------eCCCCEEEEeeCCCeEEEEEcCCCe-eee
Q 015438 192 IVHIVDVGSGT-MESLANVTEIHDGLDFSAADDGGYSFGIFSLKF------STDGRELVAGSSDDCIYVYDLEANK-LSL 263 (407)
Q Consensus 192 ~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~------s~~~~~l~~~~~dg~i~i~d~~~~~-~~~ 263 (407)
.|++||+.++. ..... .+|...|.++.| +|++++|++++.||.|++||+++++ .+.
T Consensus 91 ~i~iwd~~~~~~~~~~~----------------~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~ 154 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYSV----------------KGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVA 154 (357)
T ss_dssp CEEEECTTSCSSCSEEE----------------CCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSE
T ss_pred eEEEEeCCCCCccEEEE----------------EecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcce
Confidence 99999999776 32221 146678999955 6789999999999999999999887 677
Q ss_pred eeeccCC----CeEEEE----ecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecC---CCCEEE
Q 015438 264 RILAHTS----DVNTVC----FGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRG---DGRYLI 332 (407)
Q Consensus 264 ~~~~~~~----~v~~i~----~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~---~~~~l~ 332 (407)
.+..|.+ .+.+++ |+ +++++|++++.|+.|++||++ .++.. ....|...|.+++|+| ++.+|+
T Consensus 155 ~~~~~~~~~~~~v~~~~~~~~~~-~~~~~l~~~~~d~~i~i~d~~----~~~~~-~~~~~~~~v~~~~~~~~~~~~~~l~ 228 (357)
T 3i2n_A 155 NMEPVQGENKRDCWTVAFGNAYN-QEERVVCAGYDNGDIKLFDLR----NMALR-WETNIKNGVCSLEFDRKDISMNKLV 228 (357)
T ss_dssp EECCCTTSCCCCEEEEEEECCCC--CCCEEEEEETTSEEEEEETT----TTEEE-EEEECSSCEEEEEESCSSSSCCEEE
T ss_pred eccccCCCCCCceEEEEEEeccC-CCCCEEEEEccCCeEEEEECc----cCcee-eecCCCCceEEEEcCCCCCCCCEEE
Confidence 7766555 789998 55 789999999999999999998 55553 4466889999999999 999999
Q ss_pred EEeCCCcEEEEECCCCCCcccccC-CCccccccceeeeCCCCCC-cc-CCCCCcceEEEeCCc-----------------
Q 015438 333 SNGKDQAIKLWDIRKMSSNASCNL-GFRSYEWDYRWMDYPPQAR-DL-KHPCDQSVATYKGHS----------------- 392 (407)
Q Consensus 333 s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~-~l-~~~~~~~v~~~~gh~----------------- 392 (407)
+++.||.|++||+++.+....+.. ....+...+..+.|+|+++ ++ +.+.|+.|++|+-..
T Consensus 229 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~ 308 (357)
T 3i2n_A 229 ATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVA 308 (357)
T ss_dssp EEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCC
T ss_pred EECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccc
Confidence 999999999999998776554321 1225667889999999987 44 556688888887431
Q ss_pred -----------cceeeEEEeeCCCCC
Q 015438 393 -----------VLRTLIRCHFSPVYR 407 (407)
Q Consensus 393 -----------~~~~~~~~~fsp~~~ 407 (407)
....+..+.|+|+++
T Consensus 309 ~~~~~~~~~~~~~~~v~~~~~s~~~~ 334 (357)
T 3i2n_A 309 GSVSLLQNVTLSTQPISSLDWSPDKR 334 (357)
T ss_dssp CEEEEEEEEECCSSCEEEEEECSSST
T ss_pred cccceeeccccCCCCeeEEEEcCCCC
Confidence 113578899999864
No 67
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4.2e-33 Score=258.21 Aligned_cols=245 Identities=11% Similarity=0.050 Sum_probs=201.3
Q ss_pred cccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCe------EEeEeeeccccceEEEEEEECCC----C---CeE
Q 015438 118 WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGW------KIQKDILAKSLRWTVTDTSLSPD----Q---RHL 184 (407)
Q Consensus 118 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~------~~~~~~~~~~~~~~v~~~~~sp~----~---~~l 184 (407)
..+.+|.+.|++++|+| ++|++|+.||.|+||++.++. ... ....|...|.+++|+|+ + ++|
T Consensus 10 ~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~---~~~~h~~~v~~~~~~~~~~~~g~~~~~l 84 (397)
T 1sq9_A 10 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSY---SHFVHKSGLHHVDVLQAIERDAFELCLV 84 (397)
T ss_dssp EESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEE---EEECCTTCEEEEEEEEEEETTTEEEEEE
T ss_pred hhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcce---EEecCCCcEEEEEEecccccCCccccEE
Confidence 45678999999999999 899999999999999998875 232 23467778999999999 9 999
Q ss_pred EEEeCCCeEEEEECCCCce-----eccccccccccceeeeecCCCCc-----cccEEEEEEe----CCCCE-EEEeeCCC
Q 015438 185 VYASMSPIVHIVDVGSGTM-----ESLANVTEIHDGLDFSAADDGGY-----SFGIFSLKFS----TDGRE-LVAGSSDD 249 (407)
Q Consensus 185 ~~~~~dg~i~vwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~s----~~~~~-l~~~~~dg 249 (407)
++++.|+.|++||+.++.. ..... +| ...|.+++|+ |++++ |++++.||
T Consensus 85 ~s~~~dg~i~iw~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg 148 (397)
T 1sq9_A 85 ATTSFSGDLLFYRITREDETKKVIFEKLD----------------LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG 148 (397)
T ss_dssp EEEETTSCEEEEEEEECTTTCCEEEEEEC----------------CSCTTGGGSCEEEEEEECCC----CEEEEEEETTS
T ss_pred EEEcCCCCEEEEEccCCcccccccceeec----------------ccccccCCCcEEEEEEeeccCCCCceEEEEEeCCC
Confidence 9999999999999987664 11111 23 4689999999 99999 99999999
Q ss_pred eEEEEEcCC------Ceeee-----eee-------ccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeee
Q 015438 250 CIYVYDLEA------NKLSL-----RIL-------AHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGV 311 (407)
Q Consensus 250 ~i~i~d~~~------~~~~~-----~~~-------~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~ 311 (407)
.|++||+++ ++.+. .+. .|...|.+++|+ +++ +|++++.|+.|++||++ .++++..
T Consensus 149 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~-~l~~~~~dg~i~i~d~~----~~~~~~~ 222 (397)
T 1sq9_A 149 TTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDIS-ERG-LIATGFNNGTVQISELS----TLRPLYN 222 (397)
T ss_dssp CEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEEC-TTS-EEEEECTTSEEEEEETT----TTEEEEE
T ss_pred cEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEEC-CCc-eEEEEeCCCcEEEEECC----CCceeEE
Confidence 999999998 66665 663 488999999998 677 99999999999999998 7888889
Q ss_pred ecc---c---cCCeEEEEecCCCCEEEEEeCC---CcEEEEECCCCCCcccccCC---------CccccccceeeeCCCC
Q 015438 312 LMG---H---LEGITFIDSRGDGRYLISNGKD---QAIKLWDIRKMSSNASCNLG---------FRSYEWDYRWMDYPPQ 373 (407)
Q Consensus 312 ~~~---~---~~~i~~~~~s~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~---------~~~~~~~v~~~~~~~~ 373 (407)
+.. | ...|++++|+|++++|++++.| |.|++||+++.+.+..+... ...+...+..+.|+|+
T Consensus 223 ~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 302 (397)
T 1sq9_A 223 FESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS 302 (397)
T ss_dssp EECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSS
T ss_pred EeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCC
Confidence 988 8 9999999999999999999999 99999999988766554220 0015678899999999
Q ss_pred CCccCCC-CCcceEEEe
Q 015438 374 ARDLKHP-CDQSVATYK 389 (407)
Q Consensus 374 ~~~l~~~-~~~~v~~~~ 389 (407)
+++|+++ .|+.|++|+
T Consensus 303 ~~~l~~~~~dg~i~iwd 319 (397)
T 1sq9_A 303 GETLCSAGWDGKLRFWD 319 (397)
T ss_dssp SSEEEEEETTSEEEEEE
T ss_pred CCEEEEEeCCCeEEEEE
Confidence 9877655 577777776
No 68
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.9e-34 Score=260.73 Aligned_cols=226 Identities=12% Similarity=0.057 Sum_probs=177.1
Q ss_pred ccccceeeeeccC--CCCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECC
Q 015438 102 ADCCHMLSRYLPV--NGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (407)
Q Consensus 102 ~~~~~~~~~~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp 179 (407)
.+....+|+.... .....+.+|...|.+++|+|++++|++++.|+.|++||+.++...........|...|.+++|+|
T Consensus 31 ~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 110 (377)
T 3dwl_C 31 ATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSP 110 (377)
T ss_dssp SSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCT
T ss_pred CCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECC
Confidence 3455666666655 56778889999999999999999999999999999999988752223334556888999999999
Q ss_pred CCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcC--
Q 015438 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE-- 257 (407)
Q Consensus 180 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~-- 257 (407)
++++|++++.|+.|++||++++......... ...|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 111 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~------------~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 178 (377)
T 3dwl_C 111 NEDKFAVGSGARVISVCYFEQENDWWVSKHL------------KRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVR 178 (377)
T ss_dssp TSSCCEEEESSSCEEECCC-----CCCCEEE------------CSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCS
T ss_pred CCCEEEEEecCCeEEEEEECCcccceeeeEe------------ecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEec
Confidence 9999999999999999999877531111111 01266789999999999999999999999999985
Q ss_pred ----------------CCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCce----eeeeccccC
Q 015438 258 ----------------ANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKP----AGVLMGHLE 317 (407)
Q Consensus 258 ----------------~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~----~~~~~~~~~ 317 (407)
.++++..+ .|...|.+++|+ +++++|++++.|+.|++||++ .++. +..+.+|..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s-p~~~~l~~~~~d~~i~iwd~~----~~~~~~~~~~~~~~~~~ 252 (377)
T 3dwl_C 179 DVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFS-PSGNALAYAGHDSSVTIAYPS----APEQPPRALITVKLSQL 252 (377)
T ss_dssp SCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEEC-TTSSCEEEEETTTEEC-CEEC----STTSCEEECCCEECSSS
T ss_pred ccCCCccccccccccchhhhhhcc-cCCceEEEEEEC-CCCCEEEEEeCCCcEEEEECC----CCCCcceeeEeecCCCC
Confidence 35566666 899999999998 789999999999999999998 5555 788889999
Q ss_pred CeEEEEecCCCCEEEEEeCCCcEEEEECC
Q 015438 318 GITFIDSRGDGRYLISNGKDQAIKLWDIR 346 (407)
Q Consensus 318 ~i~~~~~s~~~~~l~s~~~dg~i~iwd~~ 346 (407)
.|++++|+|++++|++++.++.+ +|+..
T Consensus 253 ~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 253 PLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred ceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 99999999999999998866655 66665
No 69
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.8e-32 Score=249.80 Aligned_cols=204 Identities=16% Similarity=0.181 Sum_probs=169.2
Q ss_pred ccCCCceEEEEECCCCCEEEEEe--CCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEEC
Q 015438 121 DQTTSRAYVSQFSADGSLFVAGF--QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV 198 (407)
Q Consensus 121 ~~h~~~v~~~~~s~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~ 198 (407)
..+...+.+++|||||+++++++ .|+.|+|||+.++..+... .|...|.+++|+|++++|++++.++ +.+|+.
T Consensus 130 ~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~----~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~ 204 (365)
T 4h5i_A 130 TNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI----ETRGEVKDLHFSTDGKVVAYITGSS-LEVIST 204 (365)
T ss_dssp CCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE----ECSSCCCEEEECTTSSEEEEECSSC-EEEEET
T ss_pred CCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe----CCCCceEEEEEccCCceEEecccee-EEEEEe
Confidence 34566799999999999987654 6899999999998665543 2556799999999999999998654 667776
Q ss_pred CCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCC----eEEEEEcCCCee----eeeeeccCC
Q 015438 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD----CIYVYDLEANKL----SLRILAHTS 270 (407)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg----~i~i~d~~~~~~----~~~~~~~~~ 270 (407)
.++....... ..+|...|.+++|+|+++++++++.|+ .+++||+..... ...+..|..
T Consensus 205 ~~~~~~~~~~--------------~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 270 (365)
T 4h5i_A 205 VTGSCIARKT--------------DFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFK 270 (365)
T ss_dssp TTCCEEEEEC--------------CCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCS
T ss_pred ccCcceeeee--------------cCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCC
Confidence 6665432211 124666899999999999999998887 688999877653 345678999
Q ss_pred CeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeee-ccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 015438 271 DVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVL-MGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKM 348 (407)
Q Consensus 271 ~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 348 (407)
.|++++|+ +++++|++|+.|+.|+|||++ +++++..+ .+|...|++++|+|||++|++|+.|++|+|||+...
T Consensus 271 ~V~~~~~S-pdg~~lasgs~D~~V~iwd~~----~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 271 GITSMDVD-MKGELAVLASNDNSIALVKLK----DLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp CEEEEEEC-TTSCEEEEEETTSCEEEEETT----TTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred CeEeEEEC-CCCCceEEEcCCCEEEEEECC----CCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 99999998 899999999999999999998 88888874 789999999999999999999999999999999653
No 70
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-33 Score=277.59 Aligned_cols=259 Identities=17% Similarity=0.145 Sum_probs=208.9
Q ss_pred cccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCC--CCeEEEEeCCCeEEE
Q 015438 118 WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD--QRHLVYASMSPIVHI 195 (407)
Q Consensus 118 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~dg~i~v 195 (407)
.++.+|.+.|++++|+|++++|++|+.||.|+|||+.++.. ........|..+|++++|+|+ +++|++|+.||.|++
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~-~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH-KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEE-EEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCC-ccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 46789999999999999999999999999999999985422 233345678889999999988 999999999999999
Q ss_pred EECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCC--CCEEEEeeCCCeEEEEEcCCCe--eeeeeeccCCC
Q 015438 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD--GRELVAGSSDDCIYVYDLEANK--LSLRILAHTSD 271 (407)
Q Consensus 196 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~ 271 (407)
||+.++........ .+|...|.+++|+|+ ++++++|+.||.|++||++++. ....+..|...
T Consensus 82 wd~~~~~~~~~~~~--------------~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~ 147 (753)
T 3jro_A 82 WKEENGRWSQIAVH--------------AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG 147 (753)
T ss_dssp EEEETTEEEEEEEE--------------CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSC
T ss_pred EECCCCcccccccc--------------cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCc
Confidence 99988753222211 146678999999999 9999999999999999998873 34556789999
Q ss_pred eEEEEecCC------------CCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCC---CCEEEEEeC
Q 015438 272 VNTVCFGDE------------SGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGD---GRYLISNGK 336 (407)
Q Consensus 272 v~~i~~s~~------------~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---~~~l~s~~~ 336 (407)
|.+++|+|. ++.++++|+.||.|++||++.......+...+.+|...|++++|+|+ +++|++++.
T Consensus 148 v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~ 227 (753)
T 3jro_A 148 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 227 (753)
T ss_dssp EEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES
T ss_pred eEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec
Confidence 999999854 58899999999999999998432223666788899999999999999 899999999
Q ss_pred CCcEEEEECCCCCCcccc-cCCCccccccceeeeCCCCCCccCC-CCCcceEEEeCC
Q 015438 337 DQAIKLWDIRKMSSNASC-NLGFRSYEWDYRWMDYPPQARDLKH-PCDQSVATYKGH 391 (407)
Q Consensus 337 dg~i~iwd~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~v~~~~gh 391 (407)
||.|++||+++.+..... ......+...+..+.|+|+++++++ +.|+.|++|+-.
T Consensus 228 Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 228 DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp SSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred CCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 999999999987533222 1223446667889999999987765 578999999855
No 71
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.4e-32 Score=256.67 Aligned_cols=279 Identities=19% Similarity=0.188 Sum_probs=214.0
Q ss_pred cccceeeeeccCCCCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCC
Q 015438 103 DCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQR 182 (407)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 182 (407)
+....+|..........+.+|.+.|.+++|+|++++|++|+.|+.|++||+.++..+.. ...|...|.+++|+|+++
T Consensus 118 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~---~~~h~~~v~~~~~~~~~~ 194 (420)
T 3vl1_A 118 EGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRT---LIGHRATVTDIAIIDRGR 194 (420)
T ss_dssp TSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEE---EECCSSCEEEEEEETTTT
T ss_pred CCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceE---EcCCCCcEEEEEEcCCCC
Confidence 34455666555555556679999999999999999999999999999999998765543 356788899999999999
Q ss_pred eEEEEeCCCeEEEEECCCCceeccccccccccc----eeeeecC----CCCccccEEEEEEeCCCCEEEEeeCCCeEEEE
Q 015438 183 HLVYASMSPIVHIVDVGSGTMESLANVTEIHDG----LDFSAAD----DGGYSFGIFSLKFSTDGRELVAGSSDDCIYVY 254 (407)
Q Consensus 183 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~----~~~~~~~----~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~ 254 (407)
+|++++.|+.|++||+.+++....+.....+.. +.+.... ...+...+.+++|+|++++|++|+.||.|++|
T Consensus 195 ~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~ 274 (420)
T 3vl1_A 195 NVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVH 274 (420)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEE
T ss_pred EEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEE
Confidence 999999999999999998876554432211110 0010000 00123456667778999999999999999999
Q ss_pred EcCCCeeeeeee-ccCCCeEEEEecCCCCC-EEEEEeCCCcEEEEeCcccCCCC-ceeeeecc-ccCCeEEEEecCCCCE
Q 015438 255 DLEANKLSLRIL-AHTSDVNTVCFGDESGH-LIYSGSDDNLCKVWDRRCLNVKG-KPAGVLMG-HLEGITFIDSRGDGRY 330 (407)
Q Consensus 255 d~~~~~~~~~~~-~~~~~v~~i~~s~~~~~-~l~s~~~d~~i~vwd~~~~~~~~-~~~~~~~~-~~~~i~~~~~s~~~~~ 330 (407)
|+++++.+..+. .|...|.+++|+ +++. +|++|+.||.|++||++ .+ .++..+.+ |...|+++.+ +++++
T Consensus 275 d~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~g~~dg~i~vwd~~----~~~~~~~~~~~~~~~~v~~~~~-~~~~~ 348 (420)
T 3vl1_A 275 NVFSKEQTIQLPSKFTCSCNSLTVD-GNNANYIYAGYENGMLAQWDLR----SPECPVGEFLINEGTPINNVYF-AAGAL 348 (420)
T ss_dssp ETTTCCEEEEECCTTSSCEEEEEEC-SSCTTEEEEEETTSEEEEEETT----CTTSCSEEEEESTTSCEEEEEE-ETTEE
T ss_pred ECCCCceeEEcccccCCCceeEEEe-CCCCCEEEEEeCCCeEEEEEcC----CCcCchhhhhccCCCCceEEEe-CCCCE
Confidence 999988776664 478899999998 5555 99999999999999998 44 44667766 6677888855 57889
Q ss_pred EEEEeCCCcEEEEECCCCCCccccc-----CCCccccccceeeeCCCCCC----ccCCCCCcceEEEeC
Q 015438 331 LISNGKDQAIKLWDIRKMSSNASCN-----LGFRSYEWDYRWMDYPPQAR----DLKHPCDQSVATYKG 390 (407)
Q Consensus 331 l~s~~~dg~i~iwd~~~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~----~l~~~~~~~v~~~~g 390 (407)
|++++.|+.|++||+.......... .....+...+..+.|+|++. +++++.++.+.+|+-
T Consensus 349 l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~ 417 (420)
T 3vl1_A 349 FVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNL 417 (420)
T ss_dssp EEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEES
T ss_pred EEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEec
Confidence 9999999999999998854432211 11334556788899999988 889999999999974
No 72
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.1e-32 Score=252.34 Aligned_cols=253 Identities=15% Similarity=0.114 Sum_probs=198.8
Q ss_pred eccCCCCcccccCCCceEEEEECCC---CCEEEEEeCCCeEEEEEcCC-CeEEeEeeeccccceEEEEEEECCCCCeEEE
Q 015438 111 YLPVNGPWPVDQTTSRAYVSQFSAD---GSLFVAGFQASQIRIYDVER-GWKIQKDILAKSLRWTVTDTSLSPDQRHLVY 186 (407)
Q Consensus 111 ~~~~~~~~~~~~h~~~v~~~~~s~~---~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~ 186 (407)
..|......+.+|.+.|++++|+|+ |++|++|+.||.|+|||+.+ +..+.. ....|...|.+++|+|++++|++
T Consensus 26 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s 103 (368)
T 3mmy_A 26 HNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPK--AQQMHTGPVLDVCWSDDGSKVFT 103 (368)
T ss_dssp SCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEE--EEEECSSCEEEEEECTTSSEEEE
T ss_pred CCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEE--EeccccCCEEEEEECcCCCEEEE
Confidence 3455556678899999999999999 69999999999999999987 433322 34457788999999999999999
Q ss_pred EeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEE--eCCCCEEEEeeCCCeEEEEEcCCCeeeee
Q 015438 187 ASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKF--STDGRELVAGSSDDCIYVYDLEANKLSLR 264 (407)
Q Consensus 187 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 264 (407)
++.||.|++||+.+++..... +|...|.+++| +|++++|++++.||.|++||+++++.+..
T Consensus 104 ~~~dg~v~iwd~~~~~~~~~~-----------------~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 166 (368)
T 3mmy_A 104 ASCDKTAKMWDLSSNQAIQIA-----------------QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMV 166 (368)
T ss_dssp EETTSEEEEEETTTTEEEEEE-----------------ECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEE
T ss_pred EcCCCcEEEEEcCCCCceeec-----------------cccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEE
Confidence 999999999999988754422 25568999999 88999999999999999999998887666
Q ss_pred eeccC-----------------------------------------CCeEEEEecCCCC----CEEEEEeCCCcEEEEeC
Q 015438 265 ILAHT-----------------------------------------SDVNTVCFGDESG----HLIYSGSDDNLCKVWDR 299 (407)
Q Consensus 265 ~~~~~-----------------------------------------~~v~~i~~s~~~~----~~l~s~~~d~~i~vwd~ 299 (407)
+..+. ..+.++++. .+. ..+++++.|+.|++||+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dg~i~i~~~ 245 (368)
T 3mmy_A 167 LQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIF-KDKQNKPTGFALGSIEGRVAIHYI 245 (368)
T ss_dssp EECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEE-ECTTSCEEEEEEEETTSEEEEEES
T ss_pred EecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEc-ccCCCCCCeEEEecCCCcEEEEec
Confidence 65432 223333333 222 23899999999999999
Q ss_pred cccCCCCceeeeeccccC------------CeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCcccccccee
Q 015438 300 RCLNVKGKPAGVLMGHLE------------GITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRW 367 (407)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~------------~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~ 367 (407)
+... ....+..+.+|.. .|++++|+|++++|++++.||.|++||+++++.+..+ ..+...+..
T Consensus 246 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~----~~~~~~v~~ 320 (368)
T 3mmy_A 246 NPPN-PAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTS----EQLDQPISA 320 (368)
T ss_dssp SCSC-HHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC----CCCSSCEEE
T ss_pred CCCC-ccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEe----cCCCCCceE
Confidence 7221 1155667777766 7999999999999999999999999999988776553 345678999
Q ss_pred eeCCCCCCccCCC-CCcceEEE
Q 015438 368 MDYPPQARDLKHP-CDQSVATY 388 (407)
Q Consensus 368 ~~~~~~~~~l~~~-~~~~v~~~ 388 (407)
++|+|++++|+++ .|+..+.|
T Consensus 321 ~~~s~~g~~l~~~s~d~~~~~~ 342 (368)
T 3mmy_A 321 CCFNHNGNIFAYASSYDWSKGH 342 (368)
T ss_dssp EEECTTSSCEEEEECCCSTTCG
T ss_pred EEECCCCCeEEEEecccccccc
Confidence 9999999888765 34433333
No 73
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.5e-32 Score=253.69 Aligned_cols=263 Identities=17% Similarity=0.223 Sum_probs=215.2
Q ss_pred ccccceeeeeccCCCCccccc-CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCC
Q 015438 102 ADCCHMLSRYLPVNGPWPVDQ-TTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD 180 (407)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 180 (407)
.+....+|.....+....+.. |...|.+++|+|++++|++|+.||.|++||+.++..+.. ...|...|.+++| +
T Consensus 111 ~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~---~~~~~~~v~~~~~--~ 185 (401)
T 4aez_A 111 LERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRT---MAGHQARVGCLSW--N 185 (401)
T ss_dssp ETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE---ECCCSSCEEEEEE--E
T ss_pred CCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEE---ecCCCCceEEEEE--C
Confidence 444555666655554444544 899999999999999999999999999999998865544 3467788999999 5
Q ss_pred CCeEEEEeCCCeEEEEECCCCce-eccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCC
Q 015438 181 QRHLVYASMSPIVHIVDVGSGTM-ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259 (407)
Q Consensus 181 ~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~ 259 (407)
+++|++++.||.|++||+..... .... .+|...|.+++|+|++++|++|+.|+.|++||++++
T Consensus 186 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~----------------~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 249 (401)
T 4aez_A 186 RHVLSSGSRSGAIHHHDVRIANHQIGTL----------------QGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS 249 (401)
T ss_dssp TTEEEEEETTSEEEEEETTSSSCEEEEE----------------ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS
T ss_pred CCEEEEEcCCCCEEEEecccCcceeeEE----------------cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC
Confidence 67999999999999999984432 2111 146678999999999999999999999999999999
Q ss_pred eeeeeeeccCCCeEEEEecCCCCCEEEEEe--CCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEE--e
Q 015438 260 KLSLRILAHTSDVNTVCFGDESGHLIYSGS--DDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISN--G 335 (407)
Q Consensus 260 ~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~--~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~--~ 335 (407)
+.+..+..|...|.+++|+|....++++++ .|+.|++||++ .++++..+. +...|++++|+|++++|+++ +
T Consensus 250 ~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~----~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~ 324 (401)
T 4aez_A 250 IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAA----TGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGF 324 (401)
T ss_dssp SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETT----TCCEEEEEE-CSSCEEEEEECSSSSEEEEEECT
T ss_pred CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECC----CCCEEEEEe-CCCcEEEEEECCCCCeEEEEeec
Confidence 999999899999999999966778888876 79999999998 778887775 66789999999999999995 4
Q ss_pred CCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccC-CCCCcceEEEeCCc
Q 015438 336 KDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLK-HPCDQSVATYKGHS 392 (407)
Q Consensus 336 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~v~~~~gh~ 392 (407)
.||.|++||+++.+..... ....+...+..+.|+|++++|+ .+.|+.|++|+-.+
T Consensus 325 ~dg~i~v~~~~~~~~~~~~--~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 325 PDNNLSIWSYSSSGLTKQV--DIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp TTCEEEEEEEETTEEEEEE--EEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred CCCcEEEEecCCccceeEE--EecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 8999999999886543322 1234567789999999998766 55689999998654
No 74
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-33 Score=265.29 Aligned_cols=264 Identities=13% Similarity=0.192 Sum_probs=203.8
Q ss_pred ccc-ccCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCC---CeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCe
Q 015438 118 WPV-DQTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVER---GWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPI 192 (407)
Q Consensus 118 ~~~-~~h~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~ 192 (407)
..+ .+|.+.|++++|+| ++++||+|+.||.|+|||+.+ +....... ...|...|.+++|+|++++|++++.||.
T Consensus 56 ~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~s~dg~ 134 (437)
T 3gre_A 56 ATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSL-TYDCSSTVTQITMIPNFDAFAVSSKDGQ 134 (437)
T ss_dssp EEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSE-EEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred eeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceee-eccCCCCEEEEEEeCCCCEEEEEeCCCE
Confidence 345 78999999999999 999999999999999999876 42121111 2247778999999999999999999999
Q ss_pred EEEEECC---CCceeccccccccccceeeeecCCCCccccEEEEE--EeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeec
Q 015438 193 VHIVDVG---SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLK--FSTDGRELVAGSSDDCIYVYDLEANKLSLRILA 267 (407)
Q Consensus 193 i~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 267 (407)
|++||+. +++........ ....+.+... ++...+.++. +++++.+|++|+.|+.|++||+++++.+..+..
T Consensus 135 i~vwd~~~~~~~~~~~~~~~~-~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 210 (437)
T 3gre_A 135 IIVLKVNHYQQESEVKFLNCE-CIRKINLKNF---GKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIEN 210 (437)
T ss_dssp EEEEEEEEEEETTEEEEEEEE-EEEEEEGGGG---SSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEeccccCCceeeccccc-eeEEEEccCc---ccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEcc
Confidence 9999995 44433222211 1111111110 1334677777 668899999999999999999999999999987
Q ss_pred --cCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeec-cccCCeEEEEec----CCCCEEEEEeCCCcE
Q 015438 268 --HTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLM-GHLEGITFIDSR----GDGRYLISNGKDQAI 340 (407)
Q Consensus 268 --~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~-~~~~~i~~~~~s----~~~~~l~s~~~dg~i 340 (407)
|.+.|.+++|+ +++++|++|+.||.|++||++ .++++..+. .|..+|++++|+ |++.+|++++.||.|
T Consensus 211 ~~h~~~v~~~~~s-~~~~~l~s~~~dg~i~iwd~~----~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i 285 (437)
T 3gre_A 211 SPRHGAVSSICID-EECCVLILGTTRGIIDIWDIR----FNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFL 285 (437)
T ss_dssp CGGGCCEEEEEEC-TTSCEEEEEETTSCEEEEETT----TTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEE
T ss_pred CCCCCceEEEEEC-CCCCEEEEEcCCCeEEEEEcC----CccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcE
Confidence 89999999998 789999999999999999998 788888876 788899999554 578899999999999
Q ss_pred EEEECCCCCCcccccCC--------------------Cc--cccccceeeeCCCCCCccCCCCCcceEEEeCC
Q 015438 341 KLWDIRKMSSNASCNLG--------------------FR--SYEWDYRWMDYPPQARDLKHPCDQSVATYKGH 391 (407)
Q Consensus 341 ~iwd~~~~~~~~~~~~~--------------------~~--~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~gh 391 (407)
++||+++++....+... .. .+...+.++.|++...+++.+.|+.|++|+-.
T Consensus 286 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~ 358 (437)
T 3gre_A 286 TIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLN 358 (437)
T ss_dssp EEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETT
T ss_pred EEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECC
Confidence 99999988755443211 01 15556788888844455566678999999843
No 75
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=5.3e-32 Score=256.28 Aligned_cols=272 Identities=16% Similarity=0.202 Sum_probs=220.6
Q ss_pred ccccceeeeeccCCCCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEEC--C
Q 015438 102 ADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLS--P 179 (407)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s--p 179 (407)
.+....+|+....+....+.+|.+.|.+++|+|++ +|++|+.||.|++||+.++..+.. ...|...|.+++|+ +
T Consensus 140 ~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~---~~~h~~~v~~l~~~~~~ 215 (464)
T 3v7d_B 140 DDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHV---FEGHNSTVRCLDIVEYK 215 (464)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEE---ECCCSSCEEEEEEEESS
T ss_pred CCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEE---ECCCCCccEEEEEecCC
Confidence 45556677776777777788999999999999988 999999999999999999865543 45678889999998 5
Q ss_pred CCCeEEEEeCCCeEEEEECCCCceecccccccccc-------ceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEE
Q 015438 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHD-------GLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIY 252 (407)
Q Consensus 180 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 252 (407)
++++|++++.|+.|++||+.++............. ...+......+|...|.++ +++++++++|+.||.|+
T Consensus 216 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~ 293 (464)
T 3v7d_B 216 NIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLI 293 (464)
T ss_dssp SCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEE
T ss_pred CCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEE
Confidence 78999999999999999998775432211110000 0000011223566778776 56788999999999999
Q ss_pred EEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEE
Q 015438 253 VYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLI 332 (407)
Q Consensus 253 i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 332 (407)
+||+++++++..+.+|...|.+++|+ ++++++++|+.|+.|++||++ .++++..+.+|...|.+++|+ +.+|+
T Consensus 294 vwd~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~sg~~dg~i~vwd~~----~~~~~~~~~~h~~~v~~~~~~--~~~l~ 366 (464)
T 3v7d_B 294 VWDVAQMKCLYILSGHTDRIYSTIYD-HERKRCISASMDTTIRIWDLE----NGELMYTLQGHTALVGLLRLS--DKFLV 366 (464)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEE-TTTTEEEEEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEEC--SSEEE
T ss_pred EEECCCCcEEEEecCCCCCEEEEEEc-CCCCEEEEEeCCCcEEEEECC----CCcEEEEEeCCCCcEEEEEEc--CCEEE
Confidence 99999999999999999999999998 789999999999999999998 889999999999999999996 68999
Q ss_pred EEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCCCCCcceEEEeCC
Q 015438 333 SNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGH 391 (407)
Q Consensus 333 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~gh 391 (407)
+++.||.|++||+++.+..... .+...+..+.|++++++++++.|+.+++|+-.
T Consensus 367 s~s~dg~v~vwd~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~ 420 (464)
T 3v7d_B 367 SAAADGSIRGWDANDYSRKFSY-----HHTNLSAITTFYVSDNILVSGSENQFNIYNLR 420 (464)
T ss_dssp EEETTSEEEEEETTTCCEEEEE-----ECTTCCCEEEEEECSSEEEEEETTEEEEEETT
T ss_pred EEeCCCcEEEEECCCCceeeee-----cCCCCccEEEEEeCCCEEEEecCCeEEEEECC
Confidence 9999999999999987654432 23445677889999999999989999999854
No 76
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=6.2e-33 Score=260.53 Aligned_cols=265 Identities=12% Similarity=0.086 Sum_probs=202.2
Q ss_pred ccccceeeeeccCCCCc--ccccCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEEC
Q 015438 102 ADCCHMLSRYLPVNGPW--PVDQTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLS 178 (407)
Q Consensus 102 ~~~~~~~~~~~~~~~~~--~~~~h~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s 178 (407)
.+....+|++...+... .+.+|.+.|++++|+| ++.+|++|+.||+|+|||++++ ..........+...+.+++|+
T Consensus 140 ~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~ 218 (435)
T 4e54_B 140 KGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGN-ILRVFASSDTINIWFCSLDVS 218 (435)
T ss_dssp TTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSC-EEEEEECCSSCSCCCCCEEEE
T ss_pred CCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCC-ceeEEeccCCCCccEEEEEEC
Confidence 44556677665444433 3468999999999998 6899999999999999999875 333333334445568899999
Q ss_pred CCCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCC-EEEEeeCCCeEEEEEcC
Q 015438 179 PDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR-ELVAGSSDDCIYVYDLE 257 (407)
Q Consensus 179 p~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~ 257 (407)
|++++|++|+.||.|++||++...... ..+|...|.+++|+|++. +|++|+.|+.|++||++
T Consensus 219 ~~~~~l~~g~~dg~i~~wd~~~~~~~~-----------------~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~ 281 (435)
T 4e54_B 219 ASSRMVVTGDNVGNVILLNMDGKELWN-----------------LRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLR 281 (435)
T ss_dssp TTTTEEEEECSSSBEEEEESSSCBCCC-----------------SBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETT
T ss_pred CCCCEEEEEeCCCcEeeeccCcceeEE-----------------EecccceEEeeeecCCCceEEEEecCcceeeEEecc
Confidence 999999999999999999987543211 124777999999999886 78899999999999998
Q ss_pred CCeeeee---eeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccC------CeEEEEecCCC
Q 015438 258 ANKLSLR---ILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLE------GITFIDSRGDG 328 (407)
Q Consensus 258 ~~~~~~~---~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~------~i~~~~~s~~~ 328 (407)
+.+.... ..+|...|.+++|+ +++++|++++.|+.|++||++ .+.....+..|.. .+..+.|+|++
T Consensus 282 ~~~~~~~~~~~~~h~~~v~~~~~s-pdg~~l~s~~~D~~i~iwd~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (435)
T 4e54_B 282 QVRGKASFLYSLPHRHPVNAACFS-PDGARLLTTDQKSEIRVYSAS----QWDCPLGLIPHPHRHFQHLTPIKAAWHPRY 356 (435)
T ss_dssp TCCSSSCCSBCCBCSSCEEECCBC-TTSSEEEEEESSSCEEEEESS----SSSSEEEECCCCCCCCSSSCCCBCEECSSS
T ss_pred cccccceEEEeeeccccccceeEC-CCCCeeEEEcCCCEEEEEECC----CCccceEEecccccccccceeEEEEEcCCC
Confidence 8764433 35789999999998 789999999999999999998 6666666555532 23345667776
Q ss_pred CEEEEEe------------CCCcEEEEECCCCCCcccccCCCccccccceee-eCCCCCCccCCCCCcceEEEeCCc
Q 015438 329 RYLISNG------------KDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWM-DYPPQARDLKHPCDQSVATYKGHS 392 (407)
Q Consensus 329 ~~l~s~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~~~~~v~~~~gh~ 392 (407)
.++++++ .++.|++||+.+++.+..+. ..+...|.++ +|+|++++|+++.|+.|++|+-..
T Consensus 357 ~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~---~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~ 430 (435)
T 4e54_B 357 NLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLY---DPESSGISSLNEFNPMGDTLASAMGYHILIWSQQE 430 (435)
T ss_dssp SCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEEC---CSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC-
T ss_pred CEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEe---CCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCc
Confidence 6666654 34679999999988766552 2344455555 699999999999999999997543
No 77
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.3e-32 Score=250.98 Aligned_cols=254 Identities=19% Similarity=0.216 Sum_probs=206.1
Q ss_pred cCCCc--eEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECC
Q 015438 122 QTTSR--AYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVG 199 (407)
Q Consensus 122 ~h~~~--v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~ 199 (407)
+|... +.+++|++ ..+++++.|+.|++||+.++...... ...|...|.+++|+|++++|++|+.||.|++||+.
T Consensus 89 ~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~--~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~ 164 (401)
T 4aez_A 89 GIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALA--ETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVE 164 (401)
T ss_dssp TCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEE--ECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEee--ecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECc
Confidence 55554 44566665 55888889999999999988655432 22367789999999999999999999999999999
Q ss_pred CCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcC-CCeeeeeeeccCCCeEEEEec
Q 015438 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE-ANKLSLRILAHTSDVNTVCFG 278 (407)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~v~~i~~s 278 (407)
+++...... +|...|.+++|+ +++|++|+.||.|++||++ ....+..+..|.+.|.+++|+
T Consensus 165 ~~~~~~~~~----------------~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~ 226 (401)
T 4aez_A 165 SQTKLRTMA----------------GHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWR 226 (401)
T ss_dssp TCCEEEEEC----------------CCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC
T ss_pred CCeEEEEec----------------CCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEc
Confidence 876544332 466789999994 5799999999999999998 466778888999999999998
Q ss_pred CCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCC-EEEEEe--CCCcEEEEECCCCCCccccc
Q 015438 279 DESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGR-YLISNG--KDQAIKLWDIRKMSSNASCN 355 (407)
Q Consensus 279 ~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~s~~--~dg~i~iwd~~~~~~~~~~~ 355 (407)
+++++|++|+.|+.|++||++ .+.++..+.+|...|.+++|+|++. ++++++ .|+.|++||+++++....+.
T Consensus 227 -~~~~~l~s~~~d~~v~iwd~~----~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~ 301 (401)
T 4aez_A 227 -SDGLQLASGGNDNVVQIWDAR----SSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD 301 (401)
T ss_dssp -TTSSEEEEEETTSCEEEEETT----CSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE
T ss_pred -CCCCEEEEEeCCCeEEEccCC----CCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe
Confidence 689999999999999999998 7888889999999999999999775 555554 79999999999987766542
Q ss_pred CCCccccccceeeeCCCCCCccCC--C-CCcceEEEeCCcc-----------ceeeEEEeeCCCCC
Q 015438 356 LGFRSYEWDYRWMDYPPQARDLKH--P-CDQSVATYKGHSV-----------LRTLIRCHFSPVYR 407 (407)
Q Consensus 356 ~~~~~~~~~v~~~~~~~~~~~l~~--~-~~~~v~~~~gh~~-----------~~~~~~~~fsp~~~ 407 (407)
....+..+.|+|+++++++ + .++.+.+|+-.+. ...+..+.|+|+++
T Consensus 302 -----~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~ 362 (401)
T 4aez_A 302 -----AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGR 362 (401)
T ss_dssp -----CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSS
T ss_pred -----CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCC
Confidence 3456899999999998876 4 5788888863321 12567789999864
No 78
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.1e-32 Score=252.54 Aligned_cols=198 Identities=14% Similarity=0.133 Sum_probs=159.3
Q ss_pred EEEEEEECCCCCeEEEE--eCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCC
Q 015438 171 TVTDTSLSPDQRHLVYA--SMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD 248 (407)
Q Consensus 171 ~v~~~~~sp~~~~l~~~--~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 248 (407)
.+.+++|||||++++++ +.|++|+|||+.+++...... |...|.+++|+|+|++|++++.+
T Consensus 135 ~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-----------------~~~~V~~v~fspdg~~l~s~s~~ 197 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-----------------TRGEVKDLHFSTDGKVVAYITGS 197 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-----------------CSSCCCEEEECTTSSEEEEECSS
T ss_pred CEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-----------------CCCceEEEEEccCCceEEeccce
Confidence 36789999999998755 478999999999887654332 34479999999999999999865
Q ss_pred CeEEEEEcCCCeeeee--eeccCCCeEEEEecCCCCCEEEEEeCCC----cEEEEeCcccCCCCceeeeeccccCCeEEE
Q 015438 249 DCIYVYDLEANKLSLR--ILAHTSDVNTVCFGDESGHLIYSGSDDN----LCKVWDRRCLNVKGKPAGVLMGHLEGITFI 322 (407)
Q Consensus 249 g~i~i~d~~~~~~~~~--~~~~~~~v~~i~~s~~~~~~l~s~~~d~----~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~ 322 (407)
.+.+|+..+++.+.. ...|...|.+++|+ ++++++++++.|+ .+++||+............+.+|..+|+++
T Consensus 198 -~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fs-pdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~ 275 (365)
T 4h5i_A 198 -SLEVISTVTGSCIARKTDFDKNWSLSKINFI-ADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSM 275 (365)
T ss_dssp -CEEEEETTTCCEEEEECCCCTTEEEEEEEEE-ETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEE
T ss_pred -eEEEEEeccCcceeeeecCCCCCCEEEEEEc-CCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeE
Confidence 477777777765433 44688889999998 7888999998877 688899863221222345677899999999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCC-CCCcceEEEeC
Q 015438 323 DSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKH-PCDQSVATYKG 390 (407)
Q Consensus 323 ~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~v~~~~g 390 (407)
+|+|+|++||+|+.|++|+|||+++++.+..+ ...|...|+.++|+|++++|++ +.|++|++|+-
T Consensus 276 ~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~---~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 276 DVDMKGELAVLASNDNSIALVKLKDLSMSKIF---KQAHSFAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp EECTTSCEEEEEETTSCEEEEETTTTEEEEEE---TTSSSSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred EECCCCCceEEEcCCCEEEEEECCCCcEEEEe---cCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 99999999999999999999999998877665 3456778999999999988765 57999999985
No 79
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-32 Score=243.54 Aligned_cols=258 Identities=15% Similarity=0.122 Sum_probs=214.6
Q ss_pred ccccceeeeeccCCCCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCC
Q 015438 102 ADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQ 181 (407)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 181 (407)
.+....+|+.........+..|...|.+++|+|++++|++++.|+.|++|++..............|...|.++.| ++
T Consensus 37 ~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~ 114 (313)
T 3odt_A 37 RDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QD 114 (313)
T ss_dssp TTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ET
T ss_pred cCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cC
Confidence 4455667777666667778899999999999999999999999999999998765322233345668888999999 67
Q ss_pred CeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeC-CCCEEEEeeCCCeEEEEEcCCCe
Q 015438 182 RHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSDDCIYVYDLEANK 260 (407)
Q Consensus 182 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~ 260 (407)
++|++++.|+.|++|| .+....... .|...+.++.|.| +++++++++.||.|++|| ..+
T Consensus 115 ~~l~~~~~d~~i~~~d--~~~~~~~~~----------------~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~ 174 (313)
T 3odt_A 115 GVVISGSWDKTAKVWK--EGSLVYNLQ----------------AHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDK 174 (313)
T ss_dssp TEEEEEETTSEEEEEE--TTEEEEEEE----------------CCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTE
T ss_pred CEEEEEeCCCCEEEEc--CCcEEEecc----------------cCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCc
Confidence 8999999999999999 232222111 3556899999998 899999999999999999 455
Q ss_pred eeeeeec-cCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCc
Q 015438 261 LSLRILA-HTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQA 339 (407)
Q Consensus 261 ~~~~~~~-~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~ 339 (407)
....+.. |...+.+++|+ +++. +++++.|+.|++||++ .++++..+.+|...|++++|+|++ .|++++.||.
T Consensus 175 ~~~~~~~~~~~~i~~~~~~-~~~~-~~~~~~dg~i~i~d~~----~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~ 247 (313)
T 3odt_A 175 VIKTFSGIHNDVVRHLAVV-DDGH-FISCSNDGLIKLVDMH----TGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRT 247 (313)
T ss_dssp EEEEECSSCSSCEEEEEEE-ETTE-EEEEETTSEEEEEETT----TCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSE
T ss_pred eEEEEeccCcccEEEEEEc-CCCe-EEEccCCCeEEEEECC----chhhhhhhhcCCceEEEEEEecCC-CEEEEecCCE
Confidence 6666666 89999999998 6666 8899999999999998 788999999999999999999999 5999999999
Q ss_pred EEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCCCCCcceEEEeCCc
Q 015438 340 IKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHS 392 (407)
Q Consensus 340 i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~gh~ 392 (407)
|++||+++++....+ ..+...+..+.|+|++++++.+.|+.|++|+-.+
T Consensus 248 v~iwd~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 248 VRIWSKENGSLKQVI----TLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp EEEECTTTCCEEEEE----ECSSSCEEEEEECTTSCEEEEETTSCEEEEESCG
T ss_pred EEEEECCCCceeEEE----eccCceEEEEEEccCCCEEEEeCCCcEEEEeCCC
Confidence 999999998766554 3345578999999999999999999999998765
No 80
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.5e-32 Score=250.57 Aligned_cols=270 Identities=14% Similarity=0.158 Sum_probs=208.6
Q ss_pred cccceeeeeccCCCCcc-cccCCCceEEEEECCC---CCEEEEEeCCCeEEEEEcCCCe-EEeEeeeccccceEEEEEE-
Q 015438 103 DCCHMLSRYLPVNGPWP-VDQTTSRAYVSQFSAD---GSLFVAGFQASQIRIYDVERGW-KIQKDILAKSLRWTVTDTS- 176 (407)
Q Consensus 103 ~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~s~~---~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~v~~~~- 176 (407)
+....+|+....+.... ..+|...|.+++|+|+ +++|++|+.||.|++||+.++. .+. ....|...|.++.
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~---~~~~~~~~v~~~~~ 119 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVY---SVKGHKEIINAIDG 119 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSE---EECCCSSCEEEEEE
T ss_pred CcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEE---EEEecccceEEEee
Confidence 45556666554443322 3479999999999999 6999999999999999999875 332 3456778899995
Q ss_pred -----ECCCCCeEEEEeCCCeEEEEECCCCc-eeccccccccccceeeeecCCCCccccEEEEE----EeCCCCEEEEee
Q 015438 177 -----LSPDQRHLVYASMSPIVHIVDVGSGT-MESLANVTEIHDGLDFSAADDGGYSFGIFSLK----FSTDGRELVAGS 246 (407)
Q Consensus 177 -----~sp~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~s~~~~~l~~~~ 246 (407)
|+|++++|++++.|+.|++||+.++. ......... +.+...+.++. |+|++++|++++
T Consensus 120 ~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~------------~~~~~~v~~~~~~~~~~~~~~~l~~~~ 187 (357)
T 3i2n_A 120 IGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQ------------GENKRDCWTVAFGNAYNQEERVVCAGY 187 (357)
T ss_dssp ESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCT------------TSCCCCEEEEEEECCCC-CCCEEEEEE
T ss_pred ccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccC------------CCCCCceEEEEEEeccCCCCCEEEEEc
Confidence 57899999999999999999998775 222221110 11233688888 788999999999
Q ss_pred CCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCC--CCCEEEEEeCCCcEEEEeCcccCCCCceeeee-----ccccCCe
Q 015438 247 SDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDE--SGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVL-----MGHLEGI 319 (407)
Q Consensus 247 ~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~--~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-----~~~~~~i 319 (407)
.||.|++||+++++.... ..|...|.+++|+|. ++++|++++.||.|++||++ .++++..+ .+|...|
T Consensus 188 ~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~----~~~~~~~~~~~~~~~~~~~v 262 (357)
T 3i2n_A 188 DNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMR----TQHPTKGFASVSEKAHKSTV 262 (357)
T ss_dssp TTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEE----EEETTTEEEEEEEECCSSCE
T ss_pred cCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCc----CCCcccceeeeccCCCcCCE
Confidence 999999999999887544 578899999999842 88999999999999999998 44444444 3899999
Q ss_pred EEEEecCCCC-EEEEEeCCCcEEEEECCCCCCccc---------------ccCCCccccccceeeeCCCCCCccC--CCC
Q 015438 320 TFIDSRGDGR-YLISNGKDQAIKLWDIRKMSSNAS---------------CNLGFRSYEWDYRWMDYPPQARDLK--HPC 381 (407)
Q Consensus 320 ~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~~~~~~---------------~~~~~~~~~~~v~~~~~~~~~~~l~--~~~ 381 (407)
++++|+|+++ +|++++.||.|++||+++...... .......+...+..++|+|++++|+ .+.
T Consensus 263 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~ 342 (357)
T 3i2n_A 263 WQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSF 342 (357)
T ss_dssp EEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEET
T ss_pred EEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecC
Confidence 9999999998 899999999999999987654421 1112344567789999999998886 567
Q ss_pred CcceEEEeCCc
Q 015438 382 DQSVATYKGHS 392 (407)
Q Consensus 382 ~~~v~~~~gh~ 392 (407)
|+.|++|+-.+
T Consensus 343 d~~i~iw~~~~ 353 (357)
T 3i2n_A 343 DQTVRVLIVTK 353 (357)
T ss_dssp TSEEEEEEECC
T ss_pred CCcEEEEECCC
Confidence 89999997543
No 81
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=4.6e-32 Score=246.01 Aligned_cols=248 Identities=12% Similarity=0.070 Sum_probs=198.8
Q ss_pred cccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCC-eEEEEeCCCeEEEEEC
Q 015438 120 VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQR-HLVYASMSPIVHIVDV 198 (407)
Q Consensus 120 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~dg~i~vwd~ 198 (407)
..+|.+.|.+++|+|++++|++++.|+.|+||++.++...........|...|.+++|+|+++ +|++++.||.|++||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence 457999999999999999999999999999999987752112223346777899999999999 9999999999999999
Q ss_pred -CCCceeccccccccccceeeeecCCCC--ccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCC---------Ceeeeeee
Q 015438 199 -GSGTMESLANVTEIHDGLDFSAADDGG--YSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA---------NKLSLRIL 266 (407)
Q Consensus 199 -~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~---------~~~~~~~~ 266 (407)
.++..... .+ |...|.+++|+| +++|++++.|+.|++||+++ ++++..+.
T Consensus 87 ~~~~~~~~~-----------------~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 148 (342)
T 1yfq_A 87 IGSPSFQAL-----------------TNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK 148 (342)
T ss_dssp SSSSSEEEC-----------------BSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS
T ss_pred ccCCceEec-----------------cccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe
Confidence 87754221 13 666899999999 99999999999999999998 77777775
Q ss_pred ccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcc-cCCCCceeeeeccccCCeEEEEecC-CCCEEEEEeCCCcEEEEE
Q 015438 267 AHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRC-LNVKGKPAGVLMGHLEGITFIDSRG-DGRYLISNGKDQAIKLWD 344 (407)
Q Consensus 267 ~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~s~~~dg~i~iwd 344 (407)
|...|.+++|+ +++ +++++.|+.|++||++. . ..........|...|.+++|+| ++++|++++.||.|++||
T Consensus 149 -~~~~v~~~~~~-~~~--l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~ 222 (342)
T 1yfq_A 149 -VKNKIFTMDTN-SSR--LIVGMNNSQVQWFRLPLCE--DDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEF 222 (342)
T ss_dssp -SCCCEEEEEEC-SSE--EEEEESTTEEEEEESSCCT--TCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEE
T ss_pred -eCCceEEEEec-CCc--EEEEeCCCeEEEEECCccc--cccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEE
Confidence 88999999998 444 88999999999999983 1 1223334556888999999999 999999999999999999
Q ss_pred CCCC------CCcccccCCCc-----cccccceeeeCCCCCCccCCC-CCcceEEEeCC
Q 015438 345 IRKM------SSNASCNLGFR-----SYEWDYRWMDYPPQARDLKHP-CDQSVATYKGH 391 (407)
Q Consensus 345 ~~~~------~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~-~~~~v~~~~gh 391 (407)
++.. +....+..... .+...+..+.|+|++++|+++ .|+.|++|+-.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~ 281 (342)
T 1yfq_A 223 FDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQ 281 (342)
T ss_dssp CCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETT
T ss_pred EcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCc
Confidence 9886 33333221111 124488999999999877654 57889999854
No 82
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=4.9e-32 Score=251.77 Aligned_cols=266 Identities=14% Similarity=0.147 Sum_probs=209.0
Q ss_pred CceEEEEECCCCCEEE-EEeCCCeEEEEEcCCCeEE-eEeeeccccceEEEEEEECC-CCCeEEEEeCCCeEEEEECCCC
Q 015438 125 SRAYVSQFSADGSLFV-AGFQASQIRIYDVERGWKI-QKDILAKSLRWTVTDTSLSP-DQRHLVYASMSPIVHIVDVGSG 201 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~dg~i~vwd~~~~ 201 (407)
.....++++|+...++ +++.||.|+||++...... .......+|...|++++|+| ++++|++|+.||.|++||+.++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTT
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCC
Confidence 3445688999876554 4788999999999765332 22234567888999999999 9999999999999999999887
Q ss_pred ceeccccccccccceeeeecCCCCccccEEEEEEeCCC-CEEEEeeCCCeEEEEEcCCCeeeeee--eccCCCeEEEEec
Q 015438 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG-RELVAGSSDDCIYVYDLEANKLSLRI--LAHTSDVNTVCFG 278 (407)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~v~~i~~s 278 (407)
......... .....+|...|.+++|+|++ ++|++++.|+.|++||+++++.+..+ ..|...|.+++|+
T Consensus 115 ~~~~~~~~~---------~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 185 (402)
T 2aq5_A 115 GLVLPLREP---------VITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWS 185 (402)
T ss_dssp CCSSCBCSC---------SEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEEC
T ss_pred CCccccCCc---------eEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEEC
Confidence 432110000 00012477799999999998 69999999999999999999999888 7899999999998
Q ss_pred CCCCCEEEEEeCCCcEEEEeCcccCCCCceeeee-ccccCC-eEEEEecCCCCEEEEE---eCCCcEEEEECCCCCCccc
Q 015438 279 DESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVL-MGHLEG-ITFIDSRGDGRYLISN---GKDQAIKLWDIRKMSSNAS 353 (407)
Q Consensus 279 ~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-~~~~~~-i~~~~~s~~~~~l~s~---~~dg~i~iwd~~~~~~~~~ 353 (407)
+++++|++++.|+.|++||++ .++.+..+ .+|... +..++|+|++++|++| +.|+.|++||+++.+....
T Consensus 186 -~~~~~l~~~~~d~~i~iwd~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~ 260 (402)
T 2aq5_A 186 -RDGALICTSCRDKRVRVIEPR----KGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLS 260 (402)
T ss_dssp -TTSSCEEEEETTSEEEEEETT----TTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSE
T ss_pred -CCCCEEEEEecCCcEEEEeCC----CCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCce
Confidence 689999999999999999998 78888888 688776 8999999999999999 7899999999998776332
Q ss_pred ccCCCccccccceeeeCCCCCCccC-CC-CCcceEEEeCCcc------------ceeeEEEeeCCCC
Q 015438 354 CNLGFRSYEWDYRWMDYPPQARDLK-HP-CDQSVATYKGHSV------------LRTLIRCHFSPVY 406 (407)
Q Consensus 354 ~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~~~~v~~~~gh~~------------~~~~~~~~fsp~~ 406 (407)
.. ...+...+..+.|+|++++|+ ++ .|+.|++|+-.+. ...+..+.|+|+.
T Consensus 261 ~~--~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~ 325 (402)
T 2aq5_A 261 LQ--ELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKR 325 (402)
T ss_dssp EE--ECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGG
T ss_pred EE--eccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccc
Confidence 21 112344578899999998874 34 5888998874432 1346777888875
No 83
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=5.5e-32 Score=273.71 Aligned_cols=263 Identities=16% Similarity=0.210 Sum_probs=221.6
Q ss_pred cccceeeeeccCCCCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCC
Q 015438 103 DCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQR 182 (407)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 182 (407)
+....+|+.........+.+|.+.|.+++|+|++++|++++.||.|++||+.++..+.. ...|...|++++|+|+++
T Consensus 34 ~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~---~~~~~~~v~~~~~s~~~~ 110 (814)
T 3mkq_A 34 SGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVD---FEAHPDYIRSIAVHPTKP 110 (814)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEE---EECCSSCEEEEEECSSSS
T ss_pred CCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE---EecCCCCEEEEEEeCCCC
Confidence 34455666666666677889999999999999999999999999999999998866554 345777899999999999
Q ss_pred eEEEEeCCCeEEEEECCCCc-eeccccccccccceeeeecCCCCccccEEEEEEeC-CCCEEEEeeCCCeEEEEEcCCCe
Q 015438 183 HLVYASMSPIVHIVDVGSGT-MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSDDCIYVYDLEANK 260 (407)
Q Consensus 183 ~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~ 260 (407)
+|++++.||.|++||+.++. ..... .+|...|.+++|+| ++..|++++.||.|++||+.+++
T Consensus 111 ~l~~~~~dg~i~vw~~~~~~~~~~~~----------------~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~ 174 (814)
T 3mkq_A 111 YVLSGSDDLTVKLWNWENNWALEQTF----------------EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (814)
T ss_dssp EEEEEETTSEEEEEEGGGTSEEEEEE----------------ECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSS
T ss_pred EEEEEcCCCEEEEEECCCCceEEEEE----------------cCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 99999999999999998762 22211 13666899999999 88899999999999999999888
Q ss_pred eeeeeeccC-CCeEEEEecC-CCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCC
Q 015438 261 LSLRILAHT-SDVNTVCFGD-ESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQ 338 (407)
Q Consensus 261 ~~~~~~~~~-~~v~~i~~s~-~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg 338 (407)
....+..+. ..+.+++|+| +++.+|++++.||.|++||++ .+.++..+.+|...|++++|+|++++|++++.||
T Consensus 175 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 250 (814)
T 3mkq_A 175 PNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ----TKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDG 250 (814)
T ss_dssp CSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETT----TTEEEEEEECCSSCEEEEEECSSSSEEEEEETTS
T ss_pred ceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECC----CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC
Confidence 777776555 8899999984 288899999999999999998 7888999999999999999999999999999999
Q ss_pred cEEEEECCCCCCcccccCCCccccccceeeeCCCCCC--ccCCCCCcceEEEeCCc
Q 015438 339 AIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQAR--DLKHPCDQSVATYKGHS 392 (407)
Q Consensus 339 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~~~v~~~~gh~ 392 (407)
.|++||+.+++....+ ..+...+..++|+|+++ +++++.++.+.+|+-..
T Consensus 251 ~v~vwd~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 251 TLKIWNSSTYKVEKTL----NVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (814)
T ss_dssp CEEEEETTTCSEEEEE----CCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSC
T ss_pred eEEEEECCCCcEEEEe----ecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCC
Confidence 9999999988766553 33445788899999986 47777788888887543
No 84
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.9e-32 Score=254.67 Aligned_cols=261 Identities=16% Similarity=0.198 Sum_probs=206.3
Q ss_pred ccccCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCC-------eEEeEeeeccccceEEEEEEECCCCC-eEEEEeC
Q 015438 119 PVDQTTSRAYVSQFSAD-GSLFVAGFQASQIRIYDVERG-------WKIQKDILAKSLRWTVTDTSLSPDQR-HLVYASM 189 (407)
Q Consensus 119 ~~~~h~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~ 189 (407)
....|.+.|++++|+|+ +.+||+++.+|.|+||++.+. ...........|...|.+++|+|++. +|++|+.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence 34679999999999997 789999999999999999751 01122233456788899999999988 9999999
Q ss_pred CCeEEEEECCCCceecc-ccccccccceeeeecCCCCccccEEEEEEeC-CCCEEEEeeCCCeEEEEEcCCC---eeeee
Q 015438 190 SPIVHIVDVGSGTMESL-ANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSDDCIYVYDLEAN---KLSLR 264 (407)
Q Consensus 190 dg~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~---~~~~~ 264 (407)
||.|++|++..+..... .... ....+|...|.+++|+| ++.+|++++.||.|++||++++ +.+..
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~----------~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~ 272 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAK----------NIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHT 272 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECS----------EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEE
T ss_pred CCeEEEEeCCCCCCCCceeccc----------eeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeE
Confidence 99999999987532111 0000 01124777899999999 6789999999999999999987 56777
Q ss_pred eeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCC-EEEEEeCCCcEEEE
Q 015438 265 ILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGR-YLISNGKDQAIKLW 343 (407)
Q Consensus 265 ~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~s~~~dg~i~iw 343 (407)
+..|...|.+++|+|....+|++|+.||.|++||++. ...++..+.+|...|++++|+|++. +|++++.|+.|+||
T Consensus 273 ~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~---~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iw 349 (430)
T 2xyi_A 273 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN---LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 349 (430)
T ss_dssp EECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC---TTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEE
T ss_pred eecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCC---CCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEE
Confidence 8899999999999955556899999999999999982 2567888889999999999999985 69999999999999
Q ss_pred ECCCCCCcc----------cccCCCccccccceeeeCCCCCC-cc-CCCCCcceEEEeCCc
Q 015438 344 DIRKMSSNA----------SCNLGFRSYEWDYRWMDYPPQAR-DL-KHPCDQSVATYKGHS 392 (407)
Q Consensus 344 d~~~~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~-~l-~~~~~~~v~~~~gh~ 392 (407)
|++...... .....+..+...+..+.|+|++. ++ +++.|+.|++|+-..
T Consensus 350 d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 350 DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp EGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred eCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 998844321 11122445566789999999987 44 456789999998543
No 85
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.5e-32 Score=255.28 Aligned_cols=259 Identities=12% Similarity=0.156 Sum_probs=201.1
Q ss_pred CcccccCC------------CceEEEEECCCC--CEEEEEeCCCeEEEEEcCCCeEEe----------------------
Q 015438 117 PWPVDQTT------------SRAYVSQFSADG--SLFVAGFQASQIRIYDVERGWKIQ---------------------- 160 (407)
Q Consensus 117 ~~~~~~h~------------~~v~~~~~s~~~--~~l~~~~~dg~i~iwd~~~~~~~~---------------------- 160 (407)
...+.+|. ..|.+++|+|++ .+|++++.|+.|++||+.++....
T Consensus 74 ~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 153 (447)
T 3dw8_B 74 YSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLR 153 (447)
T ss_dssp EEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCC
T ss_pred ecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceE
Confidence 44677898 889999999998 799999999999999987643210
Q ss_pred ---------------EeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCC-ceeccccccccccceeeeecCCC
Q 015438 161 ---------------KDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSG-TMESLANVTEIHDGLDFSAADDG 224 (407)
Q Consensus 161 ---------------~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 224 (407)
.......|...|.+++|+|++++|++| .|+.|++||+.+. ......... .....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~---------~~~~~ 223 (447)
T 3dw8_B 154 VPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIK---------PANME 223 (447)
T ss_dssp CCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECC---------CSSGG
T ss_pred eccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecc---------ccccc
Confidence 012235688899999999999999998 7999999999843 222211110 01122
Q ss_pred CccccEEEEEEeCCC-CEEEEeeCCCeEEEEEcCCCee----eeeeeccCC------------CeEEEEecCCCCCEEEE
Q 015438 225 GYSFGIFSLKFSTDG-RELVAGSSDDCIYVYDLEANKL----SLRILAHTS------------DVNTVCFGDESGHLIYS 287 (407)
Q Consensus 225 ~~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~------------~v~~i~~s~~~~~~l~s 287 (407)
+|...|.+++|+|++ ++|++|+.||.|++||+++++. +..+..|.. .|.+++|+ +++++|++
T Consensus 224 ~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~g~~l~~ 302 (447)
T 3dw8_B 224 ELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFS-HSGRYMMT 302 (447)
T ss_dssp GCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEEC-TTSSEEEE
T ss_pred ccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEEC-CCCCEEEE
Confidence 467789999999998 8999999999999999999886 677777775 89999998 78999999
Q ss_pred EeCCCcEEEEeCcccCCC-CceeeeeccccCC---------------eEEEEecCCCCEEEEEeCCCcEEEEECCCCCCc
Q 015438 288 GSDDNLCKVWDRRCLNVK-GKPAGVLMGHLEG---------------ITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSN 351 (407)
Q Consensus 288 ~~~d~~i~vwd~~~~~~~-~~~~~~~~~~~~~---------------i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 351 (407)
++. +.|++||++ . ++++..+.+|... +..++|+|++++|++|+.||.|++||+++++..
T Consensus 303 ~~~-~~v~iwd~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 303 RDY-LSVKVWDLN----MENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp EES-SEEEEEETT----CCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE
T ss_pred eeC-CeEEEEeCC----CCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce
Confidence 999 999999998 4 7778888887542 334999999999999999999999999987653
Q ss_pred ccccCC----------------------------CccccccceeeeCCCCCCccCCCCCcceEEEeCC
Q 015438 352 ASCNLG----------------------------FRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGH 391 (407)
Q Consensus 352 ~~~~~~----------------------------~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~gh 391 (407)
...... .......+..++|+|++.+|+++..+.+.+|...
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~~~~~ 445 (447)
T 3dw8_B 378 TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQDK 445 (447)
T ss_dssp EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEEEEECC
T ss_pred eeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecceeeeeccc
Confidence 210000 0022335677899999999998888888888643
No 86
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.3e-32 Score=245.50 Aligned_cols=232 Identities=13% Similarity=0.131 Sum_probs=180.9
Q ss_pred ccccceeeeeccCC--CCcccccCCCceEEEEECC--CCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEE
Q 015438 102 ADCCHMLSRYLPVN--GPWPVDQTTSRAYVSQFSA--DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSL 177 (407)
Q Consensus 102 ~~~~~~~~~~~~~~--~~~~~~~h~~~v~~~~~s~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~ 177 (407)
.+....+|+..... ....+.+|.+.|.+++|+| ++++|++|+.|+.|+|||+.++... .......|...|.+++|
T Consensus 33 ~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~-~~~~~~~h~~~V~~v~~ 111 (316)
T 3bg1_A 33 SDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWE-KSHEHAGHDSSVNSVCW 111 (316)
T ss_dssp TTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCC-EEEEECCCSSCCCEEEE
T ss_pred CCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcce-EEEEccCCCCceEEEEE
Confidence 34455566654332 2356789999999999986 4899999999999999999876311 22234568888999999
Q ss_pred CCC--CCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCC-----------------
Q 015438 178 SPD--QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD----------------- 238 (407)
Q Consensus 178 sp~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----------------- 238 (407)
+|+ +.+|++++.|+.|++||+..+....... ...+|...|.+++|+|+
T Consensus 112 ~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~-------------~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (316)
T 3bg1_A 112 APHDYGLILACGSSDGAISLLTYTGEGQWEVKK-------------INNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNY 178 (316)
T ss_dssp CCTTTCSCEEEECSSSCEEEEEECSSSCEEECC-------------BTTSSSSCBCCCEECCCCCC------CCSCCCCC
T ss_pred CCCCCCcEEEEEcCCCCEEEEecCCCCCcceee-------------eeccccCCcceEEEccccCCccccccccccCccc
Confidence 998 7899999999999999998653211111 11246678999999997
Q ss_pred CCEEEEeeCCCeEEEEEcCCC---eeeeeeeccCCCeEEEEecCCC---CCEEEEEeCCCcEEEEeCcccCCCCceeeee
Q 015438 239 GRELVAGSSDDCIYVYDLEAN---KLSLRILAHTSDVNTVCFGDES---GHLIYSGSDDNLCKVWDRRCLNVKGKPAGVL 312 (407)
Q Consensus 239 ~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~v~~i~~s~~~---~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~ 312 (407)
+++|++|+.|+.|++||++.. +.+..+.+|...|.+++|+|.. +++|++++.|++|++||++...........+
T Consensus 179 ~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~ 258 (316)
T 3bg1_A 179 IKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLL 258 (316)
T ss_dssp CCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEE
T ss_pred cceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhh
Confidence 468999999999999999755 4667788999999999999432 3899999999999999987311011123345
Q ss_pred ccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 015438 313 MGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRK 347 (407)
Q Consensus 313 ~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 347 (407)
..|...|.+++|+|++++|++++.|++|++|+...
T Consensus 259 ~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 259 HKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred hcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 67889999999999999999999999999999763
No 87
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.2e-31 Score=281.04 Aligned_cols=248 Identities=21% Similarity=0.287 Sum_probs=209.6
Q ss_pred cccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEE
Q 015438 118 WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVD 197 (407)
Q Consensus 118 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd 197 (407)
..+.+|.+.|++++|+|+|+++++|+.||.|+|||+.++..+.. ...|...|.+++|+|++++|++++.|+.|++||
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~---~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd 685 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLD---IKAHEDEVLCCAFSSDDSYIATCSADKKVKIWD 685 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE---ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEE---eccCCCCEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence 45679999999999999999999999999999999999865554 457888999999999999999999999999999
Q ss_pred CCCCceeccccccccccceeeeecCCCCccccEEEEEEeC--CCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEE
Q 015438 198 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST--DGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTV 275 (407)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i 275 (407)
+.+++...... +|...|.+++|+| ++.++++|+.|+.|++||+.+++++..+.+|.+.|.++
T Consensus 686 ~~~~~~~~~~~----------------~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~ 749 (1249)
T 3sfz_A 686 SATGKLVHTYD----------------EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHC 749 (1249)
T ss_dssp TTTCCEEEEEE----------------CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEE
T ss_pred CCCCceEEEEc----------------CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEE
Confidence 99887654332 4667899999999 55689999999999999999999999999999999999
Q ss_pred EecCCCCCEEEEEeCCCcEEEEeCcccCC--------------------------------------------------C
Q 015438 276 CFGDESGHLIYSGSDDNLCKVWDRRCLNV--------------------------------------------------K 305 (407)
Q Consensus 276 ~~s~~~~~~l~s~~~d~~i~vwd~~~~~~--------------------------------------------------~ 305 (407)
+|+ +++++|++++.||.|++||++.... .
T Consensus 750 ~~s-p~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~ 828 (1249)
T 3sfz_A 750 RFS-PDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHT 828 (1249)
T ss_dssp EEC-SSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTT
T ss_pred EEe-cCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecC
Confidence 998 7899999999999999999862210 0
Q ss_pred Cceeeee-ccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccC-CCCCc
Q 015438 306 GKPAGVL-MGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLK-HPCDQ 383 (407)
Q Consensus 306 ~~~~~~~-~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~ 383 (407)
+..+..+ .+|...|.+++|+|+++++++++.||.|++||+.+......+ ..+...+..+.|+|+++.++ ++.|+
T Consensus 829 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~----~~h~~~v~~v~~spdg~~l~s~s~dg 904 (1249)
T 3sfz_A 829 SGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADC----RGHLSWVHGVMFSPDGSSFLTASDDQ 904 (1249)
T ss_dssp CCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEE----CCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeec----CCCccceEEEEECCCCCEEEEEeCCC
Confidence 0111111 267889999999999999999999999999999987665543 45667789999999997554 55789
Q ss_pred ceEEEe
Q 015438 384 SVATYK 389 (407)
Q Consensus 384 ~v~~~~ 389 (407)
.+++|+
T Consensus 905 ~v~vw~ 910 (1249)
T 3sfz_A 905 TIRVWE 910 (1249)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 999997
No 88
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-32 Score=254.03 Aligned_cols=248 Identities=11% Similarity=0.060 Sum_probs=188.6
Q ss_pred CCCcccc-cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccce-----EEEEEEECCCCCeEEEEe
Q 015438 115 NGPWPVD-QTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRW-----TVTDTSLSPDQRHLVYAS 188 (407)
Q Consensus 115 ~~~~~~~-~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-----~v~~~~~sp~~~~l~~~~ 188 (407)
+....+. .|...|.+++|||+|++||+++.||.|+|||.+. .+.. .. |.. .|.+++|||||++|++|+
T Consensus 75 ~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~---l~-~~~~~~~~sv~svafSPDG~~LAsgs 148 (588)
T 2j04_A 75 QQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTN---LD-SKGNLSSRTYHCFEWNPIESSIVVGN 148 (588)
T ss_dssp CSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEE---CC-CSSCSTTTCEEEEEECSSSSCEEEEE
T ss_pred CCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeee---cc-CCCccccccEEEEEEcCCCCEEEEEc
Confidence 3333443 5688999999999999999999999999999544 2222 22 332 599999999999999999
Q ss_pred CCCeEEEEECCCCceecc--ccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCee---ee
Q 015438 189 MSPIVHIVDVGSGTMESL--ANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL---SL 263 (407)
Q Consensus 189 ~dg~i~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~---~~ 263 (407)
.||+|++||+.++..... ..+.. +. ....+|...|.+++|+|+| +++++.|++|++||+.+++. ..
T Consensus 149 ~DGtVkIWd~~~~~l~~~~~i~l~t------i~-~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~ 219 (588)
T 2j04_A 149 EDGELQFFSIRKNSENTPEFYFESS------IR-LSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSR 219 (588)
T ss_dssp TTSEEEEEECCCCTTTCCCCEEEEE------EE-CSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEE
T ss_pred CCCEEEEEECCCCccccccceeeee------ee-cccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcccccee
Confidence 999999999988643110 00000 00 0123577899999999999 88888999999999988774 24
Q ss_pred ee-eccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEe--cCCCCEEEEEeCCCcE
Q 015438 264 RI-LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDS--RGDGRYLISNGKDQAI 340 (407)
Q Consensus 264 ~~-~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~--s~~~~~l~s~~~dg~i 340 (407)
.+ .+|...|.+++|+ ++.|++++ ++.|++||+. .++......+|...|..++| +|++..|+++++||+
T Consensus 220 tL~~~h~~~V~svaFs---g~~LASa~-~~tIkLWd~~----~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~- 290 (588)
T 2j04_A 220 MIQNASRRKITDLKIV---DYKVVLTC-PGYVHKIDLK----NYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY- 290 (588)
T ss_dssp EEECCCSSCCCCEEEE---TTEEEEEC-SSEEEEEETT----TTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-
T ss_pred eecccccCcEEEEEEE---CCEEEEEe-CCeEEEEECC----CCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-
Confidence 56 3788899999997 57888887 6999999996 55543334389999999999 999999999999999
Q ss_pred EEEECCCCCCcccccCCCccccccceeeeCCCCCCccCCCCCcceEEEeCCccc-------eeeEEEeeCCCCC
Q 015438 341 KLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVL-------RTLIRCHFSPVYR 407 (407)
Q Consensus 341 ~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~gh~~~-------~~~~~~~fsp~~~ 407 (407)
++|..+. +.|+|++.+++.. |+.++.|+-..+. -.+..+.||||++
T Consensus 291 klw~~d~--------------------~~~spd~~l~a~~-d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~ 343 (588)
T 2j04_A 291 KVLLEDE--------------------LHVTADNIIAPYL-EKKFKKWSTIWNEFNNYETTLVIHGISLSPDGY 343 (588)
T ss_dssp EEEESSS--------------------EEEECCCSSHHHH-HHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSS
T ss_pred EEEeecc--------------------EEECCCceEEEEc-CCEEEEEECCCCceeeeccceEEEEEEECCCCC
Confidence 9999882 3477888777765 6666666532111 2366789999874
No 89
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.7e-31 Score=257.67 Aligned_cols=263 Identities=14% Similarity=0.131 Sum_probs=209.8
Q ss_pred cccceeeeeccC----CCCcccccCCCc-eEEEEECC--CCCEEEEEeCCCeEEEEEcCCCe-----EEeEeeeccccce
Q 015438 103 DCCHMLSRYLPV----NGPWPVDQTTSR-AYVSQFSA--DGSLFVAGFQASQIRIYDVERGW-----KIQKDILAKSLRW 170 (407)
Q Consensus 103 ~~~~~~~~~~~~----~~~~~~~~h~~~-v~~~~~s~--~~~~l~~~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~ 170 (407)
+....+|..... +....+.+|... |.+++|+| ++++|++++.||.|+|||+.++. ..........|..
T Consensus 38 ~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~ 117 (615)
T 1pgu_A 38 GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAG 117 (615)
T ss_dssp TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSS
T ss_pred CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccc
Confidence 445566666555 567788999999 99999999 99999999999999999997540 1112223445777
Q ss_pred EEEEEEECCCCCeEEEEeCC----CeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCC-EEEEe
Q 015438 171 TVTDTSLSPDQRHLVYASMS----PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR-ELVAG 245 (407)
Q Consensus 171 ~v~~~~~sp~~~~l~~~~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~ 245 (407)
.|.+++|+|++++|++++.+ +.|.+||. ++..... .+|...|.+++|+|+++ +++++
T Consensus 118 ~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~--~~~~~~~----------------~~~~~~v~~~~~~~~~~~~l~~~ 179 (615)
T 1pgu_A 118 PISDISWDFEGRRLCVVGEGRDNFGVFISWDS--GNSLGEV----------------SGHSQRINACHLKQSRPMRSMTV 179 (615)
T ss_dssp CEEEEEECTTSSEEEEEECCSSCSEEEEETTT--CCEEEEC----------------CSCSSCEEEEEECSSSSCEEEEE
T ss_pred cEEEEEEeCCCCEEEEeccCCCCccEEEEEEC--CCcceee----------------ecCCccEEEEEECCCCCcEEEEE
Confidence 89999999999999999987 68888883 3322211 24677899999999998 89999
Q ss_pred eCCCeEEEEEcCCCeeeeeeeccCC---CeEEEEecCCC-CCEEEEEeCCCcEEEEeCcccCCCCceeeee-c---cccC
Q 015438 246 SSDDCIYVYDLEANKLSLRILAHTS---DVNTVCFGDES-GHLIYSGSDDNLCKVWDRRCLNVKGKPAGVL-M---GHLE 317 (407)
Q Consensus 246 ~~dg~i~i~d~~~~~~~~~~~~~~~---~v~~i~~s~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-~---~~~~ 317 (407)
+.|+.|++||+.+++.+..+..|.. .|.+++|+ ++ +++|++++.|+.|++||++ .++.+..+ . +|..
T Consensus 180 ~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~~dg~i~vwd~~----~~~~~~~~~~~~~~~~~ 254 (615)
T 1pgu_A 180 GDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFS-PDSGEFVITVGSDRKISCFDGK----SGEFLKYIEDDQEPVQG 254 (615)
T ss_dssp ETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEEC-STTCCEEEEEETTCCEEEEETT----TCCEEEECCBTTBCCCS
T ss_pred eCCCcEEEEeCCCcceeeeecccCCCCceEEEEEEC-CCCCCEEEEEeCCCeEEEEECC----CCCEeEEecccccccCC
Confidence 9999999999999999999999999 99999998 56 9999999999999999998 78888888 6 8999
Q ss_pred CeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCCCCCcceEEEe
Q 015438 318 GITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYK 389 (407)
Q Consensus 318 ~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~ 389 (407)
.|.+++|+ ++++|++++.|+.|++||+++++....+..........+..+.++....+++...++.+.+|+
T Consensus 255 ~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d 325 (615)
T 1pgu_A 255 GIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYE 325 (615)
T ss_dssp CEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEE
T ss_pred ceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEE
Confidence 99999999 999999999999999999998877665533222233344555555444444555666666665
No 90
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-31 Score=250.83 Aligned_cols=261 Identities=16% Similarity=0.100 Sum_probs=204.9
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCe---EEeEeeec-----------------------------------
Q 015438 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGW---KIQKDILA----------------------------------- 165 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~----------------------------------- 165 (407)
..++.+++|+|+|++|+++ .++.|++||+.++. .+......
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3578899999999976665 57899999998886 33222110
Q ss_pred ----------------cccceEEEEEEECCCCCeE-EEEeCCCeEEEEECC--CCceeccccccccccceeeeecCCCCc
Q 015438 166 ----------------KSLRWTVTDTSLSPDQRHL-VYASMSPIVHIVDVG--SGTMESLANVTEIHDGLDFSAADDGGY 226 (407)
Q Consensus 166 ----------------~~~~~~v~~~~~sp~~~~l-~~~~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (407)
..|...|.+++|+|++++| ++++.||.|++||+. ++.....+... .+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~--------------~~ 148 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRF--------------CF 148 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEE--------------EC
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecc--------------cC
Confidence 1233369999999999996 888899999999998 66554433211 13
Q ss_pred cccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeee----eeeccCCCeEEEEecCCC---CCEEEEEeCCCcEEEEeC
Q 015438 227 SFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSL----RILAHTSDVNTVCFGDES---GHLIYSGSDDNLCKVWDR 299 (407)
Q Consensus 227 ~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~----~~~~~~~~v~~i~~s~~~---~~~l~s~~~d~~i~vwd~ 299 (407)
...|.+++|+|++++|++|+.+|.|++|++.+++... .+.+|...|.+++|+ ++ +++|++|+.|+.|++||+
T Consensus 149 ~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s-p~~~~~~~l~s~~~d~~i~vwd~ 227 (450)
T 2vdu_B 149 SKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLI-KDSDGHQFIITSDRDEHIKISHY 227 (450)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEE-ECTTSCEEEEEEETTSCEEEEEE
T ss_pred CCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEc-CCCCCCcEEEEEcCCCcEEEEEC
Confidence 4479999999999999999999999999998877554 777899999999999 66 889999999999999999
Q ss_pred cccCCCCceeee-eccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCC--------------------
Q 015438 300 RCLNVKGKPAGV-LMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGF-------------------- 358 (407)
Q Consensus 300 ~~~~~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------------------- 358 (407)
+ .+..+.. +.+|...|++++|+ ++++|++++.|+.|++||+++++.+..+....
T Consensus 228 ~----~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (450)
T 2vdu_B 228 P----QCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNEN 302 (450)
T ss_dssp S----CTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC--------
T ss_pred C----CCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccc
Confidence 8 6777766 56899999999999 99999999999999999999988665543110
Q ss_pred -ccccccceeeeCCCCCCccCCC--CCcceEEEeC--Ccc-----------ceeeEEEeeCCC
Q 015438 359 -RSYEWDYRWMDYPPQARDLKHP--CDQSVATYKG--HSV-----------LRTLIRCHFSPV 405 (407)
Q Consensus 359 -~~~~~~v~~~~~~~~~~~l~~~--~~~~v~~~~g--h~~-----------~~~~~~~~fsp~ 405 (407)
......+..+.++|+++++.++ .++.|.+|+- ... ...+..+.|+|+
T Consensus 303 ~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~ 365 (450)
T 2vdu_B 303 NDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHND 365 (450)
T ss_dssp --CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETT
T ss_pred cccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCC
Confidence 0233567889999999888765 5788999986 211 134667788874
No 91
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.5e-30 Score=234.18 Aligned_cols=265 Identities=18% Similarity=0.224 Sum_probs=213.2
Q ss_pred ccccceeeeeccCCC-----CcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEE
Q 015438 102 ADCCHMLSRYLPVNG-----PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTS 176 (407)
Q Consensus 102 ~~~~~~~~~~~~~~~-----~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~ 176 (407)
.|....+|++...+. ...+.+|...|.+++|+|++++|++++.|+.|++|+.......... ..+...+..+.
T Consensus 59 ~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~---~~~~~~~~~~~ 135 (340)
T 4aow_A 59 RDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF---VGHTKDVLSVA 135 (340)
T ss_dssp TTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE---ECCSSCEEEEE
T ss_pred CCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeee---cCCCCceeEEE
Confidence 455666777654432 3356889999999999999999999999999999999887554432 33444688899
Q ss_pred ECCCCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCC--CEEEEeeCCCeEEEE
Q 015438 177 LSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG--RELVAGSSDDCIYVY 254 (407)
Q Consensus 177 ~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~dg~i~i~ 254 (407)
+++++++|++++.|+.+++||+......... ..+|...+..++|++++ .++++++.|+.|++|
T Consensus 136 ~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~---------------~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~ 200 (340)
T 4aow_A 136 FSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQ---------------DESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 200 (340)
T ss_dssp ECTTSSCEEEEETTSCEEEECTTSCEEEEEC---------------SSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEE
T ss_pred EeecCccceeecCCCeEEEEEeCCCceEEEE---------------eccccCcccceEEccCCCCcEEEEEcCCCEEEEE
Confidence 9999999999999999999998765432211 12466789999999865 478899999999999
Q ss_pred EcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEE
Q 015438 255 DLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISN 334 (407)
Q Consensus 255 d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~ 334 (407)
|+++++.+..+.+|.+.|.+++|+ +++++|++|+.|+.|++||++ ..+++..+..+ ..|.+++|+|++.+ +++
T Consensus 201 d~~~~~~~~~~~~h~~~v~~~~~s-~~~~~l~s~s~Dg~i~iwd~~----~~~~~~~~~~~-~~v~~~~~~~~~~~-~~~ 273 (340)
T 4aow_A 201 NLANCKLKTNHIGHTGYLNTVTVS-PDGSLCASGGKDGQAMLWDLN----EGKHLYTLDGG-DIINALCFSPNRYW-LCA 273 (340)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTCEEEEEETT----TTEEEEEEECS-SCEEEEEECSSSSE-EEE
T ss_pred ECCCCceeeEecCCCCcEEEEEEC-CCCCEEEEEeCCCeEEEEEec----cCceeeeecCC-ceEEeeecCCCCce-eec
Confidence 999999999999999999999998 789999999999999999998 77888777644 68999999998765 556
Q ss_pred eCCCcEEEEECCCCCCcccccC-----CCccccccceeeeCCCCCCccCC-CCCcceEEEeCC
Q 015438 335 GKDQAIKLWDIRKMSSNASCNL-----GFRSYEWDYRWMDYPPQARDLKH-PCDQSVATYKGH 391 (407)
Q Consensus 335 ~~dg~i~iwd~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~-~~~~~v~~~~gh 391 (407)
+.|+.|++||+++......+.. ....+...|..++|+|++++|++ +.|+.|++|+-.
T Consensus 274 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 274 ATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp EETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred cCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence 6799999999998765444321 13345667899999999987765 578999999743
No 92
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-31 Score=268.41 Aligned_cols=242 Identities=12% Similarity=0.073 Sum_probs=193.3
Q ss_pred ccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCC
Q 015438 121 DQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGS 200 (407)
Q Consensus 121 ~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~ 200 (407)
.+|...|++++|+|++++||+|+.||.|+||+..+...... ..|...|.+++|+| +++|++++.|+.|++||+.+
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~----~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~ 88 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIK----LEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYS 88 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEE----CSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTT
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEE----cCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCC
Confidence 47899999999999999999999999999999887643322 23567899999999 88999999999999999998
Q ss_pred CceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeee-----------eeeeccC
Q 015438 201 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLS-----------LRILAHT 269 (407)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~-----------~~~~~~~ 269 (407)
++...... |...|++++|+|++++|++|+.||.|++||+++++.. ..+.+|.
T Consensus 89 ~~~~~~~~-----------------~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~ 151 (902)
T 2oaj_A 89 QKVLTTVF-----------------VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARL 151 (902)
T ss_dssp CSEEEEEE-----------------CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCC
T ss_pred CcEEEEEc-----------------CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCC
Confidence 87543331 2347999999999999999999999999999988753 2345788
Q ss_pred CCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccc------------------cCCeEEEEecCCCCEE
Q 015438 270 SDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGH------------------LEGITFIDSRGDGRYL 331 (407)
Q Consensus 270 ~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~------------------~~~i~~~~~s~~~~~l 331 (407)
++|.+++|+|.++.+|++|+.|+.| +||++ .++++..+..| ...|++++|+|+|++|
T Consensus 152 ~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~l 226 (902)
T 2oaj_A 152 SPIVSIQWNPRDIGTVLISYEYVTL-TYSLV----ENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHI 226 (902)
T ss_dssp CCCCEEEEETTEEEEEEEECSSCEE-EEETT----TTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEE
T ss_pred CCeEEEEEccCCCCEEEEEeCCCcE-EEECC----CCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEE
Confidence 9999999996667899999999999 99998 77777777655 4679999999999999
Q ss_pred EEEeCCCcEEEEECCCCCCccc--ccC--CCc----------cccccceeeeC----CCCC-CccCCC-CC-----cceE
Q 015438 332 ISNGKDQAIKLWDIRKMSSNAS--CNL--GFR----------SYEWDYRWMDY----PPQA-RDLKHP-CD-----QSVA 386 (407)
Q Consensus 332 ~s~~~dg~i~iwd~~~~~~~~~--~~~--~~~----------~~~~~v~~~~~----~~~~-~~l~~~-~~-----~~v~ 386 (407)
++++.||+|++||+++++.+.. +.. .+. .+...|..++| +|++ .+++++ .+ ..+.
T Consensus 227 asgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~ 306 (902)
T 2oaj_A 227 ITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLT 306 (902)
T ss_dssp EEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEE
T ss_pred EEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEE
Confidence 9999999999999998876542 100 010 12235777777 4553 566655 32 2677
Q ss_pred EEe
Q 015438 387 TYK 389 (407)
Q Consensus 387 ~~~ 389 (407)
+|.
T Consensus 307 ~~~ 309 (902)
T 2oaj_A 307 MID 309 (902)
T ss_dssp EEE
T ss_pred EEe
Confidence 776
No 93
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.2e-30 Score=242.08 Aligned_cols=262 Identities=17% Similarity=0.233 Sum_probs=213.5
Q ss_pred cccccceeeeeccCCCCccc--ccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEEC
Q 015438 101 AADCCHMLSRYLPVNGPWPV--DQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLS 178 (407)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s 178 (407)
..+....+|+....+....+ .+|...|++|+|+|+|++||+|+.||.|+|||+.+++.+.. ...|...+.++.|
T Consensus 122 gld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~---~~~h~~~v~~~s~- 197 (420)
T 4gga_A 122 ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN---MTSHSARVGSLSW- 197 (420)
T ss_dssp EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE---ECCCSSCEEEEEE-
T ss_pred EeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE---EeCCCCceEEEee-
Confidence 34566677776655544444 57888999999999999999999999999999999866554 4567778888877
Q ss_pred CCCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCC
Q 015438 179 PDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA 258 (407)
Q Consensus 179 p~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 258 (407)
++..|++|+.|+.+++||.......... ..+|...+..+.|+|+++++++++.|+.|++||..+
T Consensus 198 -~~~~l~sgs~d~~i~~~d~~~~~~~~~~---------------~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~ 261 (420)
T 4gga_A 198 -NSYILSSGSRSGHIHHHDVRVAEHHVAT---------------LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 261 (420)
T ss_dssp -ETTEEEEEETTSEEEEEETTSSSCEEEE---------------EECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred -CCCEEEEEeCCCceeEeeecccceeeEE---------------ecccccceeeeeecCCCCeeeeeeccccceEEeecc
Confidence 5679999999999999998765432110 114667899999999999999999999999999987
Q ss_pred Ce----eeeeeeccCCCeEEEEecCCCCCEEEEE--eCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEE
Q 015438 259 NK----LSLRILAHTSDVNTVCFGDESGHLIYSG--SDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLI 332 (407)
Q Consensus 259 ~~----~~~~~~~~~~~v~~i~~s~~~~~~l~s~--~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 332 (407)
++ .+.....|...|.+++|+|..+.+++++ +.|+.|++||++ ++.++..+..| ..+.++.|+|+++.|+
T Consensus 262 ~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~----t~~~~~~~~~~-~~v~~~~~~~~~~~lv 336 (420)
T 4gga_A 262 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC----SGACLSAVDAH-SQVCSILWSPHYKELI 336 (420)
T ss_dssp CSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETT----TTEEEEEEECS-SCEEEEEEETTTTEEE
T ss_pred ccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCC----ccccceeeccc-cceeeeeecCCCCeEE
Confidence 65 3455668999999999998888888775 479999999998 78888877654 5789999999999998
Q ss_pred EEe--CCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccC-CCCCcceEEEeCC
Q 015438 333 SNG--KDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLK-HPCDQSVATYKGH 391 (407)
Q Consensus 333 s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~v~~~~gh 391 (407)
+++ .|+.|+|||+++++.+.++ ..|...|.+++|+|++++|+ ++.|++|++|+-.
T Consensus 337 ~~sg~~d~~I~iwd~~~~~~v~~l----~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 337 SGHGFAQNQLVIWKYPTMAKVAEL----KGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp EEECTTTCCEEEEETTTCCEEEEE----CCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred EEEecCCCEEEEEECCCCcEEEEE----cCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 765 7999999999998887664 34667899999999997776 4578999999754
No 94
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.3e-30 Score=246.82 Aligned_cols=241 Identities=20% Similarity=0.233 Sum_probs=202.4
Q ss_pred cccccCCCce-EEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEE
Q 015438 118 WPVDQTTSRA-YVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (407)
Q Consensus 118 ~~~~~h~~~v-~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vw 196 (407)
..+.+|...| .++.+ ++++|++|+.||.|++||+.+++.+.. ..+|...|.+++|+|++ .|++|+.||.|++|
T Consensus 115 ~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~---~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vw 188 (464)
T 3v7d_B 115 TTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQ---LSGHDGGVWALKYAHGG-ILVSGSTDRTVRVW 188 (464)
T ss_dssp EEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEE---ECCCSSCEEEEEECSTT-EEEEEETTSCEEEE
T ss_pred EEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEE---EeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEE
Confidence 3677898885 66666 568999999999999999999865543 45788899999999988 89999999999999
Q ss_pred ECCCCceeccccccccccceeeeecCCCCccccEEEEEEe--CCCCEEEEeeCCCeEEEEEcCCCee-------------
Q 015438 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFS--TDGRELVAGSSDDCIYVYDLEANKL------------- 261 (407)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s--~~~~~l~~~~~dg~i~i~d~~~~~~------------- 261 (407)
|+.+++....+. +|...|.+++|+ +++.+|++|+.|+.|++||+++++.
T Consensus 189 d~~~~~~~~~~~----------------~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 252 (464)
T 3v7d_B 189 DIKKGCCTHVFE----------------GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLV 252 (464)
T ss_dssp ETTTTEEEEEEC----------------CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEE
T ss_pred ECCCCcEEEEEC----------------CCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceE
Confidence 999886544332 466789999999 5778999999999999999987653
Q ss_pred ----------eeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEE
Q 015438 262 ----------SLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYL 331 (407)
Q Consensus 262 ----------~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 331 (407)
+..+.+|...|.++. ++++++++++.|+.|++||++ .++++..+.+|...|++++|+|++++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~l~~~~~d~~i~vwd~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l 325 (464)
T 3v7d_B 253 FHTPEENPYFVGVLRGHMASVRTVS---GHGNIVVSGSYDNTLIVWDVA----QMKCLYILSGHTDRIYSTIYDHERKRC 325 (464)
T ss_dssp ESCGGGCTTEEEEECCCSSCEEEEE---EETTEEEEEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEEETTTTEE
T ss_pred eeccCCCeEEEEEccCccceEEEEc---CCCCEEEEEeCCCeEEEEECC----CCcEEEEecCCCCCEEEEEEcCCCCEE
Confidence 445667888888874 457899999999999999998 888999999999999999999999999
Q ss_pred EEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCCCCCcceEEEeCCc
Q 015438 332 ISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHS 392 (407)
Q Consensus 332 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~gh~ 392 (407)
++|+.||.|++||+++++.+..+ ..+...+..+.+++ ..+++.+.|+.|++|+-.+
T Consensus 326 ~sg~~dg~i~vwd~~~~~~~~~~----~~h~~~v~~~~~~~-~~l~s~s~dg~v~vwd~~~ 381 (464)
T 3v7d_B 326 ISASMDTTIRIWDLENGELMYTL----QGHTALVGLLRLSD-KFLVSAAADGSIRGWDAND 381 (464)
T ss_dssp EEEETTSCEEEEETTTTEEEEEE----CCCSSCEEEEEECS-SEEEEEETTSEEEEEETTT
T ss_pred EEEeCCCcEEEEECCCCcEEEEE----eCCCCcEEEEEEcC-CEEEEEeCCCcEEEEECCC
Confidence 99999999999999998776554 34556778888873 5666777899999998664
No 95
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-31 Score=241.89 Aligned_cols=253 Identities=9% Similarity=0.054 Sum_probs=188.5
Q ss_pred EECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCceecccccc
Q 015438 131 QFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVT 210 (407)
Q Consensus 131 ~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 210 (407)
.+.+++.+|++|+.||.|++||+.+++.+.... ...|.++.|+|+ +++++.|+.|++|+.............
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-----~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~ 114 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT-----TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTN 114 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE-----EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTC
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe-----cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCc
Confidence 455688899999999999999999886655443 235888899998 999999999999987643211100000
Q ss_pred ccccceeeeecCCCCccccEEEEEEeC--CCCEEEEeeCCCeEEEEEcCCCeeeeeee-ccCCCeEEEEecCCCCCEEEE
Q 015438 211 EIHDGLDFSAADDGGYSFGIFSLKFST--DGRELVAGSSDDCIYVYDLEANKLSLRIL-AHTSDVNTVCFGDESGHLIYS 287 (407)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~i~~s~~~~~~l~s 287 (407)
. .+... ..+|...|.+++|+| ++++|++++.||.|++||+++++.+.... .+...+.+++|+ +++.+|++
T Consensus 115 ~-----~~~~~-~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~-pdg~~las 187 (343)
T 3lrv_A 115 K-----VLREI-EVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLH-KDSLLLAL 187 (343)
T ss_dssp C-----EEEEE-ECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEEC-TTSCEEEE
T ss_pred c-----eeEEe-ecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEEC-CCCCEEEE
Confidence 0 00000 113556899999999 99999999999999999999998866553 455689999998 78999999
Q ss_pred EeCCCcEEEEeCcccCCCCcee-eeecc-ccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccc
Q 015438 288 GSDDNLCKVWDRRCLNVKGKPA-GVLMG-HLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDY 365 (407)
Q Consensus 288 ~~~d~~i~vwd~~~~~~~~~~~-~~~~~-~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v 365 (407)
|+.||.|++||++ .++.+ ..+.+ |..+|++++|+|++.+|++++ |+.|++||+++.+....+.. ...+...+
T Consensus 188 g~~dg~i~iwd~~----~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~-~~~~~~~~ 261 (343)
T 3lrv_A 188 YSPDGILDVYNLS----SPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPT-YTIPEFKT 261 (343)
T ss_dssp ECTTSCEEEEESS----CTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCC-CBC-----
T ss_pred EcCCCEEEEEECC----CCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecc-cccccccc
Confidence 9999999999998 66666 67777 999999999999999999999 55999999999877654432 11222333
Q ss_pred --eeeeCCCCCCccCC--CCCcceEEEeCCccc-----eeeEEEeeCC
Q 015438 366 --RWMDYPPQARDLKH--PCDQSVATYKGHSVL-----RTLIRCHFSP 404 (407)
Q Consensus 366 --~~~~~~~~~~~l~~--~~~~~v~~~~gh~~~-----~~~~~~~fsp 404 (407)
..++|+|++++|++ +.|+.+++|+-.... ..+..+.|+|
T Consensus 262 ~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~ 309 (343)
T 3lrv_A 262 GTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTKDEESALCLQS 309 (343)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEEEEEEECCC--
T ss_pred cceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEecCceeEecCc
Confidence 46999999999988 558899999643321 1233567776
No 96
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=7.9e-31 Score=276.84 Aligned_cols=280 Identities=17% Similarity=0.214 Sum_probs=226.6
Q ss_pred ccccceeeeeccCCCCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECC--
Q 015438 102 ADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP-- 179 (407)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp-- 179 (407)
.+....+|+....+....+.+|.+.|.+++|+|+|++|++++.|+.|+|||+.++..+.. ...|...|.+++|+|
T Consensus 635 ~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~---~~~~~~~v~~~~~~~~~ 711 (1249)
T 3sfz_A 635 ADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHT---YDEHSEQVNCCHFTNKS 711 (1249)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE---EECCSSCEEEEEECSSS
T ss_pred CCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEE---EcCCCCcEEEEEEecCC
Confidence 345566777777777778889999999999999999999999999999999999866554 346777899999999
Q ss_pred CCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCC
Q 015438 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259 (407)
Q Consensus 180 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~ 259 (407)
++.++++++.|+.|++||+.++....... +|...|.+++|+|++++|++++.||.|++||+.++
T Consensus 712 ~~~~l~sg~~d~~v~vwd~~~~~~~~~~~----------------~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~ 775 (1249)
T 3sfz_A 712 NHLLLATGSNDFFLKLWDLNQKECRNTMF----------------GHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSA 775 (1249)
T ss_dssp SCCEEEEEETTSCEEEEETTSSSEEEEEC----------------CCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGT
T ss_pred CceEEEEEeCCCeEEEEECCCcchhheec----------------CCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCC
Confidence 55689999999999999999887543322 46778999999999999999999999999999876
Q ss_pred eeeeee-------------------------------------------------------eccCCCeEEEEecCCCCCE
Q 015438 260 KLSLRI-------------------------------------------------------LAHTSDVNTVCFGDESGHL 284 (407)
Q Consensus 260 ~~~~~~-------------------------------------------------------~~~~~~v~~i~~s~~~~~~ 284 (407)
+....+ .+|...|.+++|+ +++.+
T Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~s-p~~~~ 854 (1249)
T 3sfz_A 776 NERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFS-PYDHL 854 (1249)
T ss_dssp EEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEEC-SSTTE
T ss_pred cccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEc-CCCCE
Confidence 543322 1567889999998 78999
Q ss_pred EEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccC--------
Q 015438 285 IYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNL-------- 356 (407)
Q Consensus 285 l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-------- 356 (407)
+++++.|+.|++||+. .+..+..+.+|...|++++|+|+|++|++++.||.|++||+.+.........
T Consensus 855 l~~~~~dg~v~vwd~~----~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~ 930 (1249)
T 3sfz_A 855 AVIALSQYCVELWNID----SRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVF 930 (1249)
T ss_dssp EEEECSSSCEEEEETT----TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEE
T ss_pred EEEEeCCCeEEEEEcC----CCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEE
Confidence 9999999999999998 8888999999999999999999999999999999999999875322111100
Q ss_pred -----------------------C--CccccccceeeeCCCCCCccCCC-CCcceEEEe-----------CCccceeeEE
Q 015438 357 -----------------------G--FRSYEWDYRWMDYPPQARDLKHP-CDQSVATYK-----------GHSVLRTLIR 399 (407)
Q Consensus 357 -----------------------~--~~~~~~~v~~~~~~~~~~~l~~~-~~~~v~~~~-----------gh~~~~~~~~ 399 (407)
. .......+.++.|+|++.+++++ .++.+.+|+ +|.. .+..
T Consensus 931 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~--~v~~ 1008 (1249)
T 3sfz_A 931 QENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKK--AVRH 1008 (1249)
T ss_dssp ETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSS--CCCC
T ss_pred cCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCC--ceEE
Confidence 0 01123457889999999888765 466777776 4443 5777
Q ss_pred EeeCCCCC
Q 015438 400 CHFSPVYR 407 (407)
Q Consensus 400 ~~fsp~~~ 407 (407)
+.|+|+++
T Consensus 1009 l~~s~dg~ 1016 (1249)
T 3sfz_A 1009 IQFTADGK 1016 (1249)
T ss_dssp EEECSSSS
T ss_pred EEECCCCC
Confidence 89999864
No 97
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.2e-30 Score=236.55 Aligned_cols=246 Identities=12% Similarity=0.105 Sum_probs=194.3
Q ss_pred cccceeeeeccCC----CCcccccCCCceEEEEECC--CCCEEEEEeCCCeEEEEEcCCCeE------EeEeeeccccce
Q 015438 103 DCCHMLSRYLPVN----GPWPVDQTTSRAYVSQFSA--DGSLFVAGFQASQIRIYDVERGWK------IQKDILAKSLRW 170 (407)
Q Consensus 103 ~~~~~~~~~~~~~----~~~~~~~h~~~v~~~~~s~--~~~~l~~~~~dg~i~iwd~~~~~~------~~~~~~~~~~~~ 170 (407)
+....+|+..... ....+.+|...|.+++|+| ++++|++++.||.|++||+.++.. .........|..
T Consensus 32 dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 111 (351)
T 3f3f_A 32 DQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKG 111 (351)
T ss_dssp TSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSS
T ss_pred CCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCC
Confidence 4445566665443 2334578999999999999 699999999999999999987621 122334556788
Q ss_pred EEEEEEECCC--CCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCC---CCEEEEe
Q 015438 171 TVTDTSLSPD--QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD---GRELVAG 245 (407)
Q Consensus 171 ~v~~~~~sp~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~ 245 (407)
.|.+++|+|+ +++|++++.|+.|++||+.+++............ .......++...+.+++|+|+ +.+|+++
T Consensus 112 ~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~ 188 (351)
T 3f3f_A 112 SLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMK---VLSIPPANHLQSDFCLSWCPSRFSPEKLAVS 188 (351)
T ss_dssp CEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEE---SCSCCCSSCSCCCEEEEECCCSSSCCEEEEE
T ss_pred ceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccc---ccccccCCcccceeEEEeccCCCCCcEEEEe
Confidence 8999999999 9999999999999999999887654443322111 111122356778999999997 8999999
Q ss_pred eCCCeEEEEEcCCCee--eeeeeccCCCeEEEEecCCCC----CEEEEEeCCCcEEEEeCcccC----------------
Q 015438 246 SSDDCIYVYDLEANKL--SLRILAHTSDVNTVCFGDESG----HLIYSGSDDNLCKVWDRRCLN---------------- 303 (407)
Q Consensus 246 ~~dg~i~i~d~~~~~~--~~~~~~~~~~v~~i~~s~~~~----~~l~s~~~d~~i~vwd~~~~~---------------- 303 (407)
+.++.+.+|+...++. +..+.+|...|.+++|+ +++ ++|++++.||.|++||++...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~-p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 267 (351)
T 3f3f_A 189 ALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWA-PSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFD 267 (351)
T ss_dssp ETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEEC-CCSSCSSEEEEEEETTSCEEEEEEEECC----------------
T ss_pred cCCCcEEEEccCCCceeeeeecCCCCcceeEEEEC-CCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccC
Confidence 9999998888887764 66777899999999998 555 799999999999999997310
Q ss_pred --------------------------CCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcc
Q 015438 304 --------------------------VKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNA 352 (407)
Q Consensus 304 --------------------------~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~ 352 (407)
....++..+.+|...|++++|+|++++|++++.||.|++||+.+.+...
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~ 342 (351)
T 3f3f_A 268 NSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFK 342 (351)
T ss_dssp -----------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEE
T ss_pred CCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchh
Confidence 0125677788999999999999999999999999999999999876543
No 98
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1e-30 Score=245.56 Aligned_cols=234 Identities=13% Similarity=0.143 Sum_probs=182.0
Q ss_pred ccccceeeeecc---CCCC--cccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcC---CCeEEeEe-------eecc
Q 015438 102 ADCCHMLSRYLP---VNGP--WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVE---RGWKIQKD-------ILAK 166 (407)
Q Consensus 102 ~~~~~~~~~~~~---~~~~--~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~-------~~~~ 166 (407)
.+....+|+... .... ....+|...|.+++|+|++++|++|+.||.|++||++ ++...... ....
T Consensus 84 ~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~ 163 (437)
T 3gre_A 84 DQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLK 163 (437)
T ss_dssp TTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGG
T ss_pred CCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEcc
Confidence 344555666544 2211 2222699999999999999999999999999999985 33222211 1111
Q ss_pred c--cceEEEEEE--ECCCCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEE
Q 015438 167 S--LRWTVTDTS--LSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL 242 (407)
Q Consensus 167 ~--~~~~v~~~~--~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 242 (407)
. +...+.++. ++|++.+|++++.|+.|++||+.+++....+... .|...|.+++|+|++++|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--------------~h~~~v~~~~~s~~~~~l 229 (437)
T 3gre_A 164 NFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENS--------------PRHGAVSSICIDEECCVL 229 (437)
T ss_dssp GGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECC--------------GGGCCEEEEEECTTSCEE
T ss_pred CcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccC--------------CCCCceEEEEECCCCCEE
Confidence 1 344566666 6688999999999999999999988765443311 155689999999999999
Q ss_pred EEeeCCCeEEEEEcCCCeeeeeee-ccCCCeEEEEecC---CCCCEEEEEeCCCcEEEEeCcccCCCCceeeeecc----
Q 015438 243 VAGSSDDCIYVYDLEANKLSLRIL-AHTSDVNTVCFGD---ESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMG---- 314 (407)
Q Consensus 243 ~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~i~~s~---~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~---- 314 (407)
++|+.||.|++||+++++++..+. .|...|.+++|+| +++.+|++|+.|+.|++||++ .++.+..+.+
T Consensus 230 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~----~~~~~~~~~~~~~~ 305 (437)
T 3gre_A 230 ILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFV----KGHCQYAFINSDEQ 305 (437)
T ss_dssp EEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETT----TTEEEEEEESSSSC
T ss_pred EEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcC----CCcEEEEEEcCCCC
Confidence 999999999999999999988876 7788999997774 467799999999999999998 6666655543
Q ss_pred ----------------------ccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccc
Q 015438 315 ----------------------HLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASC 354 (407)
Q Consensus 315 ----------------------~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 354 (407)
|...|++++|+ ++++|++|+.|+.|++||+++++....+
T Consensus 306 ~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~ 366 (437)
T 3gre_A 306 PSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAV 366 (437)
T ss_dssp CCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEE
T ss_pred CccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEE
Confidence 55568889999 7799999999999999999998876654
No 99
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.98 E-value=8.4e-30 Score=228.54 Aligned_cols=254 Identities=14% Similarity=0.203 Sum_probs=195.9
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCceecc
Q 015438 127 AYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESL 206 (407)
Q Consensus 127 v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~ 206 (407)
.++|+||+++ +||+| .|++|+|||+.+++.+.. .....|...|++++|+|++++|++|+.|+.|++||+++++....
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~-~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQL-LQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 104 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEE-EECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEE-EEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE
Confidence 4679999986 67665 589999999999866544 34566788899999999999999999999999999998876443
Q ss_pred ccccccc-------ccee------------------eeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCee
Q 015438 207 ANVTEIH-------DGLD------------------FSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL 261 (407)
Q Consensus 207 ~~~~~~~-------~~~~------------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~ 261 (407)
....... ...- .......+|...+..+.+++++++|++++.|+.|++||+++++.
T Consensus 105 ~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 184 (318)
T 4ggc_A 105 MTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG 184 (318)
T ss_dssp EECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTT
T ss_pred ecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcc
Confidence 2211000 0000 00001135777899999999999999999999999999987653
Q ss_pred ----eeeeeccCCCeEEEEecCCCCCEEE--EEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEe
Q 015438 262 ----SLRILAHTSDVNTVCFGDESGHLIY--SGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNG 335 (407)
Q Consensus 262 ----~~~~~~~~~~v~~i~~s~~~~~~l~--s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~ 335 (407)
......+.+.|.++.++|..++++. +++.++.|++||.+ ....... ..+...+..+.|+|++..+++++
T Consensus 185 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~----~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~s 259 (318)
T 4ggc_A 185 GWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC----SGACLSA-VDAHSQVCSILWSPHYKELISGH 259 (318)
T ss_dssp BSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETT----TCCEEEE-EECSSCEEEEEEETTTTEEEEEE
T ss_pred cccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecc----ccccccc-ccceeeeeeeeecccccceEEEE
Confidence 3445567889999999977777664 45678999999997 5454443 44677899999999999888765
Q ss_pred --CCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCC-CCCcceEEEeCCc
Q 015438 336 --KDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKH-PCDQSVATYKGHS 392 (407)
Q Consensus 336 --~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~v~~~~gh~ 392 (407)
.|+.|++||+++++.+.++ ..|...|.+++|+|++++|++ +.|++|++|+-..
T Consensus 260 g~~d~~i~iwd~~~~~~~~~l----~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 260 GFAQNQLVIWKYPTMAKVAEL----KGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp CTTTCCEEEEETTTCCEEEEE----CCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EcCCCEEEEEECCCCcEEEEE----cCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 7999999999998877654 346678999999999977764 5789999997643
No 100
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=3.1e-30 Score=243.25 Aligned_cols=249 Identities=12% Similarity=0.087 Sum_probs=195.5
Q ss_pred cccCCCceEEEEECCCCCEE-EEEeCCCeEEEEEcC--CCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEE
Q 015438 120 VDQTTSRAYVSQFSADGSLF-VAGFQASQIRIYDVE--RGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (407)
Q Consensus 120 ~~~h~~~v~~~~~s~~~~~l-~~~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vw 196 (407)
..+|.+.|.+++|+|++++| ++++.||.|+|||+. ++..+.... ...+...|.+++|+|++++|++++.+|.|++|
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~-~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~ 176 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRK-RFCFSKRPNAISIAEDDTTVIIADKFGDVYSI 176 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEE-EEECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeee-cccCCCCceEEEEcCCCCEEEEEeCCCcEEEE
Confidence 45788999999999999996 888899999999998 665544332 23455679999999999999999999999999
Q ss_pred ECCCCceec-cccccccccceeeeecCCCCccccEEEEEEeCC---CCEEEEeeCCCeEEEEEcCCCeeeee-eeccCCC
Q 015438 197 DVGSGTMES-LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD---GRELVAGSSDDCIYVYDLEANKLSLR-ILAHTSD 271 (407)
Q Consensus 197 d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~ 271 (407)
++.++.... .... ..+|...|.+++|+|+ +++|++|+.|+.|++||+++++.+.. +.+|...
T Consensus 177 ~~~~~~~~~~~~~~-------------~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~ 243 (450)
T 2vdu_B 177 DINSIPEEKFTQEP-------------ILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHF 243 (450)
T ss_dssp ETTSCCCSSCCCCC-------------SEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSC
T ss_pred ecCCccccccccee-------------eecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCc
Confidence 998776432 1111 1136668999999999 99999999999999999999988777 5589999
Q ss_pred eEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccc-------------------------cCCeEEEEecC
Q 015438 272 VNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGH-------------------------LEGITFIDSRG 326 (407)
Q Consensus 272 v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~-------------------------~~~i~~~~~s~ 326 (407)
|.+++|+ ++++|++++.|+.|++||++ .++++..+..+ ...|.+++|+|
T Consensus 244 v~~~~~s--d~~~l~s~~~d~~v~vwd~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 317 (450)
T 2vdu_B 244 VSSICCG--KDYLLLSAGGDDKIFAWDWK----TGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK 317 (450)
T ss_dssp EEEEEEC--STTEEEEEESSSEEEEEETT----TCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS
T ss_pred eEEEEEC--CCCEEEEEeCCCeEEEEECC----CCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC
Confidence 9999997 89999999999999999998 77777766532 35689999999
Q ss_pred CCCEEEEEe-CCCcEEEEEC--CCCCCcccccCCCccccccceeeeCCCCCCccCCCC-------CcceEEEeC
Q 015438 327 DGRYLISNG-KDQAIKLWDI--RKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPC-------DQSVATYKG 390 (407)
Q Consensus 327 ~~~~l~s~~-~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~~~v~~~~g 390 (407)
++++|++++ .|+.|++||+ .....+... .....+ ..+..++|+|++.+++..+ ++.|.+|.-
T Consensus 318 ~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~-~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~ 389 (450)
T 2vdu_B 318 NLPFVAFFVEATKCIIILEMSEKQKGDLALK-QIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEY 389 (450)
T ss_dssp SSSEEEEEETTCSEEEEEEECSSSTTCEEEE-EEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEeccCCCCceeec-cEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEE
Confidence 999999999 8999999999 443211111 111222 5678899999766666543 455777764
No 101
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.98 E-value=8.5e-30 Score=239.89 Aligned_cols=269 Identities=19% Similarity=0.252 Sum_probs=221.5
Q ss_pred ccccceeeeeccCCCCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCC
Q 015438 102 ADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQ 181 (407)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 181 (407)
.+....+|+....+....+.+|.+.|.+++|+ ++++++|+.||.|++||+.++..+.. ...|...|.++.|+ +
T Consensus 137 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~---~~~h~~~v~~~~~~--~ 209 (445)
T 2ovr_B 137 DDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHT---LYGHTSTVRCMHLH--E 209 (445)
T ss_dssp TTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEE---ECCCSSCEEEEEEE--T
T ss_pred CCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEE---ECCCCCcEEEEEec--C
Confidence 44556677776667777888999999999998 67999999999999999999865543 45677789999995 5
Q ss_pred CeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCee
Q 015438 182 RHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL 261 (407)
Q Consensus 182 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~ 261 (407)
+.+++++.||.|++||+.+++...... +|...|.+++| +++++++|+.||.|++||+++++.
T Consensus 210 ~~l~s~s~dg~i~~wd~~~~~~~~~~~----------------~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~ 271 (445)
T 2ovr_B 210 KRVVSGSRDATLRVWDIETGQCLHVLM----------------GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETC 271 (445)
T ss_dssp TEEEEEETTSEEEEEESSSCCEEEEEE----------------CCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEE
T ss_pred CEEEEEeCCCEEEEEECCCCcEEEEEc----------------CCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcE
Confidence 689999999999999999876544332 36668999999 788999999999999999999999
Q ss_pred eeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEE
Q 015438 262 SLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIK 341 (407)
Q Consensus 262 ~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~ 341 (407)
+..+..|...|.+++| ++.++++++.|+.|++||++ .++++..+.+|...+.++.+ ++++|++++.||.|+
T Consensus 272 ~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~i~d~~----~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~ 342 (445)
T 2ovr_B 272 LHTLQGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVE----TGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVK 342 (445)
T ss_dssp EEEECCCSSCEEEEEE---CSSEEEEEETTSCEEEEETT----TCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEE
T ss_pred eEEecCCCCceEEEEE---CCCEEEEEeCCCeEEEEECC----CCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEE
Confidence 9999999999999999 57899999999999999998 88899999999999998887 567999999999999
Q ss_pred EEECCCCCCcccccCCCccccccceeeeCCCCCCccCCCCCcceEEEeCCcc--------------ceeeEEEeeCCCC
Q 015438 342 LWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSV--------------LRTLIRCHFSPVY 406 (407)
Q Consensus 342 iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~gh~~--------------~~~~~~~~fsp~~ 406 (407)
+||+++++....+.. ...+...+.++.|++ ..+++.+.|+.|++|+-.+. ...+..+.|+|+.
T Consensus 343 vwd~~~~~~~~~~~~-~~~~~~~v~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 419 (445)
T 2ovr_B 343 IWDIKTGQCLQTLQG-PNKHQSAVTCLQFNK-NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTK 419 (445)
T ss_dssp EEETTTCCEEEEECS-TTSCSSCEEEEEECS-SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSE
T ss_pred EEECCCCcEEEEEcc-CCCCCCCEEEEEECC-CEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCE
Confidence 999999877665532 233566788888864 44555667889999974321 2346778899875
No 102
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.98 E-value=1.2e-29 Score=237.08 Aligned_cols=253 Identities=15% Similarity=0.202 Sum_probs=199.9
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCceec
Q 015438 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMES 205 (407)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~ 205 (407)
-++.|+||++ +.||+| .|++|+|||..++..... .....|...|++++|+|++++|++|+.||.|++||+.+++...
T Consensus 107 y~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~~~~~-~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVA-LDNSVYLWSASSGDILQL-LQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 183 (420)
T ss_dssp TCBCEEECTT-SEEEEE-ETTEEEEEETTTCCEEEE-EECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred cceeEEECCC-CEEEEE-eCCEEEEEECCCCCEEEE-EEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE
Confidence 3678999975 577766 589999999999865543 3455677789999999999999999999999999999887644
Q ss_pred cccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCC-eeeeeeeccCCCeEEEEecCCCCCE
Q 015438 206 LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN-KLSLRILAHTSDVNTVCFGDESGHL 284 (407)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~i~~s~~~~~~ 284 (407)
... +|...+.++.++ +.+|++|+.|+.+++||.... ..+..+.+|...+..+.|+ +++++
T Consensus 184 ~~~----------------~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~-~~g~~ 244 (420)
T 4gga_A 184 NMT----------------SHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWA-PDGRH 244 (420)
T ss_dssp EEC----------------CCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC-TTSSE
T ss_pred EEe----------------CCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeec-CCCCe
Confidence 332 466688888775 679999999999999999865 4567788999999999998 88999
Q ss_pred EEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCC-EEEE--EeCCCcEEEEECCCCCCcccccCCCccc
Q 015438 285 IYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGR-YLIS--NGKDQAIKLWDIRKMSSNASCNLGFRSY 361 (407)
Q Consensus 285 l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~s--~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 361 (407)
+++++.|+.+++||..........+.....|...|.+++|+|++. .+++ |+.|++|++||+++++....+. .
T Consensus 245 l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~-----~ 319 (420)
T 4gga_A 245 LASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-----A 319 (420)
T ss_dssp EEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE-----C
T ss_pred eeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec-----c
Confidence 999999999999999854434456677888999999999999664 5554 3479999999999987766542 2
Q ss_pred cccceeeeCCCCCCccCCC---CCcceEEE-----------eCCccceeeEEEeeCCCCC
Q 015438 362 EWDYRWMDYPPQARDLKHP---CDQSVATY-----------KGHSVLRTLIRCHFSPVYR 407 (407)
Q Consensus 362 ~~~v~~~~~~~~~~~l~~~---~~~~v~~~-----------~gh~~~~~~~~~~fsp~~~ 407 (407)
...+..+.|+++++.+.++ .|+.|++| .||.. .|..++||||++
T Consensus 320 ~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~--~V~~l~~spdg~ 377 (420)
T 4gga_A 320 HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTS--RVLSLTMSPDGA 377 (420)
T ss_dssp SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSS--CEEEEEECTTSS
T ss_pred ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCC--CEEEEEEcCCCC
Confidence 3346677777877665432 35555555 46764 788999999974
No 103
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.98 E-value=4.1e-30 Score=241.36 Aligned_cols=259 Identities=20% Similarity=0.263 Sum_probs=209.8
Q ss_pred ccccceeeeeccCCCCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCC
Q 015438 102 ADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQ 181 (407)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 181 (407)
.+....+|+....+....+.+|.+.|.+++| ++++|++|+.||.|++||+.++..+.. ...|...|.+++|++
T Consensus 151 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~---~~~h~~~v~~l~~~~-- 223 (435)
T 1p22_A 151 RDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNT---LIHHCEAVLHLRFNN-- 223 (435)
T ss_dssp SSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEE---ECCCCSCEEEEECCT--
T ss_pred CCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEE---EcCCCCcEEEEEEcC--
Confidence 4455667776666667788899999999999 788999999999999999999865544 446777899999974
Q ss_pred CeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCee
Q 015438 182 RHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL 261 (407)
Q Consensus 182 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~ 261 (407)
..+++|+.||.|++||+.++........ ..+|...|.+++| ++++|++|+.||.|++||+++++.
T Consensus 224 ~~l~s~s~dg~i~vwd~~~~~~~~~~~~-------------~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~ 288 (435)
T 1p22_A 224 GMMVTCSKDRSIAVWDMASPTDITLRRV-------------LVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF 288 (435)
T ss_dssp TEEEEEETTSCEEEEECSSSSCCEEEEE-------------ECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCE
T ss_pred CEEEEeeCCCcEEEEeCCCCCCceeeeE-------------ecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcE
Confidence 5999999999999999987764322111 1246678999999 678999999999999999999999
Q ss_pred eeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEE
Q 015438 262 SLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIK 341 (407)
Q Consensus 262 ~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~ 341 (407)
+..+..|...|.++.++ ++++++|+.||.|++||++ .++++..+.+|...|++++| ++.+|++|+.||.|+
T Consensus 289 ~~~~~~~~~~v~~~~~~---~~~l~~g~~dg~i~iwd~~----~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~ 359 (435)
T 1p22_A 289 VRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE----CGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIK 359 (435)
T ss_dssp EEEEECCSSCEEEEEEE---TTEEEEEETTSCEEEEETT----TCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEE
T ss_pred EEEEcCCCCcEEEEEeC---CCEEEEEeCCCeEEEEECC----CCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEE
Confidence 99999999999999994 5799999999999999998 88999999999999999999 789999999999999
Q ss_pred EEECCCCCCccc-----ccCCCccccccceeeeCCCCCCccCCCCCcceEEEeCCc
Q 015438 342 LWDIRKMSSNAS-----CNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHS 392 (407)
Q Consensus 342 iwd~~~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~gh~ 392 (407)
+||+++.+.... .......+...+..+.| ....+++++.|+.|++|+-..
T Consensus 360 vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-~~~~l~s~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 360 VWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF-DEFQIVSSSHDDTILIWDFLN 414 (435)
T ss_dssp EEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE-CSSCEEECCSSSEEEEEC---
T ss_pred EEECCCCCCccccccchheeeccCCCCCeEEEEe-CCCEEEEEeCCCEEEEEECCC
Confidence 999987652211 11113445567778888 233455666799999998543
No 104
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.98 E-value=1.8e-31 Score=247.04 Aligned_cols=246 Identities=11% Similarity=0.038 Sum_probs=173.5
Q ss_pred cccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeE--eeeccccceEEEEEEECC--------CCCeEEEEeC
Q 015438 120 VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQK--DILAKSLRWTVTDTSLSP--------DQRHLVYASM 189 (407)
Q Consensus 120 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~--~~~~~~~~~~v~~~~~sp--------~~~~l~~~~~ 189 (407)
...|...+....+++++.+|++++.|++|+|||+.++..... .....+|...|.+++|+| ++++||+++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~ 164 (393)
T 4gq1_A 85 ENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGD 164 (393)
T ss_dssp CC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEET
T ss_pred ccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEEC
Confidence 345566666667777888999999999999999998755432 334678999999999998 7899999999
Q ss_pred CCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCC-EEEEeeCCCeEEEEEcCCCeeeee----
Q 015438 190 SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR-ELVAGSSDDCIYVYDLEANKLSLR---- 264 (407)
Q Consensus 190 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~~~---- 264 (407)
|++|+|||+.++....... +|...|.+++|+|++. +|++|+.|++|++||+++++....
T Consensus 165 D~tv~~Wd~~~~~~~~~~~----------------~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~ 228 (393)
T 4gq1_A 165 DCTLIIWRLTDEGPILAGY----------------PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQT 228 (393)
T ss_dssp TSEEEEEEEETTEEEEEEE----------------ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC--------
T ss_pred CCeEEEEECCCCceeeeec----------------CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCccccccccc
Confidence 9999999998765432221 2555899999999874 899999999999999988754322
Q ss_pred ---------------------eeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEE
Q 015438 265 ---------------------ILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFID 323 (407)
Q Consensus 265 ---------------------~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~ 323 (407)
..+|...+.++.|+++++..|++++.|+.+++||++ .++....+..|...+..+.
T Consensus 229 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~----~~~~~~~l~~~~~~~~~~~ 304 (393)
T 4gq1_A 229 ELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLF----ANNDYNEISDSTMKLGPKN 304 (393)
T ss_dssp --CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----------------------C
T ss_pred CCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECc----cCCCCceEeeecCccccEE
Confidence 135777899999988899999999999999999997 4444444444443333332
Q ss_pred ------------------ecC--CCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCCCCCc
Q 015438 324 ------------------SRG--DGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQ 383 (407)
Q Consensus 324 ------------------~s~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 383 (407)
|+| ++.++++|+.||.|++||+.+++..... ..+...|..++|+|+|++|+++.++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~----~~~~~~V~svafspdG~~LA~as~~ 380 (393)
T 4gq1_A 305 LLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIP----IQLGMPIVDFCWHQDGSHLAIATEG 380 (393)
T ss_dssp CSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEE----EECSSCEEEEEECTTSSEEEEEESS
T ss_pred EccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEe----cCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 222 3446778889999999999988776543 3345679999999999999999888
Q ss_pred ceEEEe
Q 015438 384 SVATYK 389 (407)
Q Consensus 384 ~v~~~~ 389 (407)
.+.+|+
T Consensus 381 Gv~lvr 386 (393)
T 4gq1_A 381 SVLLTR 386 (393)
T ss_dssp EEEEEE
T ss_pred CeEEEE
Confidence 777764
No 105
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.7e-30 Score=237.36 Aligned_cols=230 Identities=15% Similarity=0.187 Sum_probs=185.1
Q ss_pred cccceeeeec--cCCCCcccccCCCceEEEEECCC--CCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEEC
Q 015438 103 DCCHMLSRYL--PVNGPWPVDQTTSRAYVSQFSAD--GSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLS 178 (407)
Q Consensus 103 ~~~~~~~~~~--~~~~~~~~~~h~~~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s 178 (407)
+....+|... .......+.+|...|.+++|+|+ +++|++++.||.|++||+.++... .......|...|.+++|+
T Consensus 32 dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~-~~~~~~~~~~~v~~~~~~ 110 (379)
T 3jrp_A 32 DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWS-QIAVHAVHSASVNSVQWA 110 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEE-EEEEECCCSSCEEEEEEC
T ss_pred CCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCcee-EeeeecCCCcceEEEEeC
Confidence 4455666665 33444567899999999999987 999999999999999999987522 233445677789999999
Q ss_pred CC--CCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeC-------------CCCEEE
Q 015438 179 PD--QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-------------DGRELV 243 (407)
Q Consensus 179 p~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-------------~~~~l~ 243 (407)
|+ +.+|++++.|+.|++||+........... .+|...|.+++|+| ++.+|+
T Consensus 111 ~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~--------------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~ 176 (379)
T 3jrp_A 111 PHEYGPLLLVASSDGKVSVVEFKENGTTSPIII--------------DAHAIGVNSASWAPATIEEDGEHNGTKESRKFV 176 (379)
T ss_dssp CGGGCSEEEEEETTSEEEEEECCTTSCCCEEEE--------------ECCTTCEEEEEECCCC----------CTTCEEE
T ss_pred CCCCCCEEEEecCCCcEEEEecCCCCceeeEEe--------------cCCCCceEEEEEcCccccccccccCCCCCCEEE
Confidence 99 99999999999999999987744322211 13666899999999 689999
Q ss_pred EeeCCCeEEEEEcCCCe----eeeeeeccCCCeEEEEecCCC---CCEEEEEeCCCcEEEEeCcccCCC-Cceeeeeccc
Q 015438 244 AGSSDDCIYVYDLEANK----LSLRILAHTSDVNTVCFGDES---GHLIYSGSDDNLCKVWDRRCLNVK-GKPAGVLMGH 315 (407)
Q Consensus 244 ~~~~dg~i~i~d~~~~~----~~~~~~~~~~~v~~i~~s~~~---~~~l~s~~~d~~i~vwd~~~~~~~-~~~~~~~~~~ 315 (407)
+++.||.|++||+++++ ....+..|...|.+++|+ ++ +++|++++.||.|++||++..... ...+.....|
T Consensus 177 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~s-p~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 255 (379)
T 3jrp_A 177 TGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS-PTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKF 255 (379)
T ss_dssp EEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC-CCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCC
T ss_pred EEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEEC-CCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccC
Confidence 99999999999998764 445677899999999998 56 899999999999999999832100 1122233448
Q ss_pred cCCeEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 015438 316 LEGITFIDSRGDGRYLISNGKDQAIKLWDIRKM 348 (407)
Q Consensus 316 ~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 348 (407)
...|++++|+|++++|++++.||.|++||++..
T Consensus 256 ~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 256 PDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp SSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred CCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 889999999999999999999999999999854
No 106
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=1.2e-29 Score=231.59 Aligned_cols=259 Identities=17% Similarity=0.170 Sum_probs=179.5
Q ss_pred cccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEE-EEeCCCeEEEE
Q 015438 118 WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLV-YASMSPIVHIV 196 (407)
Q Consensus 118 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~-~~~~dg~i~vw 196 (407)
.....|...|.+++|+|+|++|++|+.++ ++||++.++....... . . .+..+.+.++++.++ +++.|+.|++|
T Consensus 13 ~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~-~---~-~~~~~~~~~~~~~~~~~~~~d~~v~iW 86 (355)
T 3vu4_A 13 VPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQE-M---R-HLSKVRMLHRTNYVAFVTGVKEVVHIW 86 (355)
T ss_dssp ------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEE-C---S-CCCEEEECTTSSEEEEECSSTTEEEEE
T ss_pred cccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeee-c---C-CeEEEEEcCCCCEEEEEECCccEEEEE
Confidence 34578999999999999999999987765 8899998764433211 1 1 367788888888774 57788999999
Q ss_pred ECCCCceeccccccccccceeeeec---------------CCC-----CccccEEEEEEeCCCCEEEE--eeCCCeEEEE
Q 015438 197 DVGSGTMESLANVTEIHDGLDFSAA---------------DDG-----GYSFGIFSLKFSTDGRELVA--GSSDDCIYVY 254 (407)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~-----~~~~~v~~~~~s~~~~~l~~--~~~dg~i~i~ 254 (407)
|+.+++.............+.+... ... ........+++++ .++++ |+.||.|++|
T Consensus 87 d~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~--~~la~~sg~~~g~v~iw 164 (355)
T 3vu4_A 87 DDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSN--GLLVYSNEFNLGQIHIT 164 (355)
T ss_dssp ETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEET--TEEEEEESSCTTCEEEE
T ss_pred ECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEc--cEEEEeCCCcCcEEEEE
Confidence 9998876544332211111110000 000 0000223344555 45555 6889999999
Q ss_pred EcCCCe----------------eeeeeeccCCCeEEEEecCCCCCEEEEEeCCCc-EEEEeCcccCCCCceeeeec-c-c
Q 015438 255 DLEANK----------------LSLRILAHTSDVNTVCFGDESGHLIYSGSDDNL-CKVWDRRCLNVKGKPAGVLM-G-H 315 (407)
Q Consensus 255 d~~~~~----------------~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~-i~vwd~~~~~~~~~~~~~~~-~-~ 315 (407)
|+.+++ .+..+.+|.+.|.+++|+ +++++|++|+.|++ |++||++ +++++..+. + |
T Consensus 165 d~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s-~~g~~l~s~s~d~~~v~iwd~~----~~~~~~~~~~g~h 239 (355)
T 3vu4_A 165 KLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLN-RKSDMVATCSQDGTIIRVFKTE----DGVLVREFRRGLD 239 (355)
T ss_dssp ECCC------------------CCEEECCCSSCEEEEEEC-TTSSEEEEEETTCSEEEEEETT----TCCEEEEEECTTC
T ss_pred ECCCCCccccccccccccccCcccEEEEccCCceEEEEEC-CCCCEEEEEeCCCCEEEEEECC----CCcEEEEEEcCCC
Confidence 999765 267788999999999998 78999999999998 9999998 888999998 5 9
Q ss_pred cCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCccccc------CCCccccc-------------cceeeeCCCCCCc
Q 015438 316 LEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCN------LGFRSYEW-------------DYRWMDYPPQARD 376 (407)
Q Consensus 316 ~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------~~~~~~~~-------------~v~~~~~~~~~~~ 376 (407)
...|++++|+|++++|++++.|++|++||++......... .......| +...++|++++..
T Consensus 240 ~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~ 319 (355)
T 3vu4_A 240 RADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSL 319 (355)
T ss_dssp CSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEE
T ss_pred CCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCE
Confidence 9999999999999999999999999999998754322110 00111111 2256788888855
Q ss_pred cC-CCCCcceEEEe
Q 015438 377 LK-HPCDQSVATYK 389 (407)
Q Consensus 377 l~-~~~~~~v~~~~ 389 (407)
+. ...|+.+.+|.
T Consensus 320 l~~~~~dg~~~~~~ 333 (355)
T 3vu4_A 320 VVVWPHTRMIETFK 333 (355)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEEeCCCeEEEEE
Confidence 54 45678888886
No 107
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=2.2e-29 Score=225.78 Aligned_cols=230 Identities=15% Similarity=0.196 Sum_probs=182.3
Q ss_pred ccccceeeeeccCCCCccc--ccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEee----------------
Q 015438 102 ADCCHMLSRYLPVNGPWPV--DQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDI---------------- 163 (407)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---------------- 163 (407)
.|....+|+....+....+ .+|...|.+++|+|++++||+|+.||.|++||+.+++.+....
T Consensus 43 ~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l 122 (318)
T 4ggc_A 43 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYIL 122 (318)
T ss_dssp ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEE
T ss_pred eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEE
Confidence 4566667776555544444 5788899999999999999999999999999998875543321
Q ss_pred ----------------------eccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeec
Q 015438 164 ----------------------LAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAA 221 (407)
Q Consensus 164 ----------------------~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 221 (407)
....|...+..+.+++++++|++++.|+.|++||+.+++........
T Consensus 123 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~----------- 191 (318)
T 4ggc_A 123 SSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQT----------- 191 (318)
T ss_dssp EEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEE-----------
T ss_pred EEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceee-----------
Confidence 11345667888999999999999999999999999876543222111
Q ss_pred CCCCccccEEEEEEeCCCCE---EEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEe--CCCcEEE
Q 015438 222 DDGGYSFGIFSLKFSTDGRE---LVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGS--DDNLCKV 296 (407)
Q Consensus 222 ~~~~~~~~v~~~~~s~~~~~---l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~--~d~~i~v 296 (407)
...+...|.++.++|++.. +++++.++.|++||.......... .+...+..+.|+ +.+..+++++ .|+.|++
T Consensus 192 -~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~-~~~~~~~~~sg~~d~~i~i 268 (318)
T 4ggc_A 192 -FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV-DAHSQVCSILWS-PHYKELISGHGFAQNQLVI 268 (318)
T ss_dssp -ECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE-ECSSCEEEEEEE-TTTTEEEEEECTTTCCEEE
T ss_pred -ecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc-cceeeeeeeeec-ccccceEEEEEcCCCEEEE
Confidence 1135558999999997753 346778899999999988776554 577889999998 5555555544 7999999
Q ss_pred EeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCC
Q 015438 297 WDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMS 349 (407)
Q Consensus 297 wd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 349 (407)
||++ +++++..+.+|...|++++|+|+|++|+||+.||+|+|||+....
T Consensus 269 wd~~----~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 269 WKYP----TMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp EETT----TCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred EECC----CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 9998 889999999999999999999999999999999999999997643
No 108
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=1.4e-29 Score=237.21 Aligned_cols=222 Identities=14% Similarity=0.185 Sum_probs=182.3
Q ss_pred CCCCcccccCCCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCCeE----EeEeeeccccceEEEEEEECC-CCCeEEEE
Q 015438 114 VNGPWPVDQTTSRAYVSQFSADGS-LFVAGFQASQIRIYDVERGWK----IQKDILAKSLRWTVTDTSLSP-DQRHLVYA 187 (407)
Q Consensus 114 ~~~~~~~~~h~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~ 187 (407)
......+.+|...|.+++|+|++. +|++|+.||.|++|++..+.. +........|...|.+++|+| ++.+|+++
T Consensus 171 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~ 250 (430)
T 2xyi_A 171 CQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSV 250 (430)
T ss_dssp CCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEE
T ss_pred CCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEE
Confidence 455667789999999999999998 999999999999999987321 222234456888899999999 67889999
Q ss_pred eCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCC-EEEEeeCCCeEEEEEcCC-Ceeeeee
Q 015438 188 SMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR-ELVAGSSDDCIYVYDLEA-NKLSLRI 265 (407)
Q Consensus 188 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~-~~~~~~~ 265 (407)
+.|+.|++||++++......... ..|...|++++|+|++. +|++|+.||.|++||+++ .+++..+
T Consensus 251 ~~dg~i~i~d~~~~~~~~~~~~~-------------~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~ 317 (430)
T 2xyi_A 251 ADDQKLMIWDTRNNNTSKPSHTV-------------DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 317 (430)
T ss_dssp ETTSEEEEEETTCSCSSSCSEEE-------------ECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEE
T ss_pred eCCCeEEEEECCCCCCCcceeEe-------------ecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEe
Confidence 99999999999876321111110 13566899999999987 688999999999999998 5677888
Q ss_pred eccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCC----------CCceeeeeccccCCeEEEEecCCCC-EEEEE
Q 015438 266 LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNV----------KGKPAGVLMGHLEGITFIDSRGDGR-YLISN 334 (407)
Q Consensus 266 ~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~----------~~~~~~~~~~~~~~i~~~~~s~~~~-~l~s~ 334 (407)
..|...|.+++|+|....+|++++.|+.|++||++.... ....+..+.+|...|++++|+|++. +|+++
T Consensus 318 ~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~ 397 (430)
T 2xyi_A 318 ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSV 397 (430)
T ss_dssp ECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEE
T ss_pred ecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEE
Confidence 899999999999955557899999999999999973211 1366778889999999999999999 89999
Q ss_pred eCCCcEEEEECCCC
Q 015438 335 GKDQAIKLWDIRKM 348 (407)
Q Consensus 335 ~~dg~i~iwd~~~~ 348 (407)
+.||.|+||++...
T Consensus 398 s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 398 SEDNIMQVWQMAEN 411 (430)
T ss_dssp ETTSEEEEEEECHH
T ss_pred ECCCCEEEeEcccc
Confidence 99999999999863
No 109
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=5.6e-29 Score=230.92 Aligned_cols=231 Identities=18% Similarity=0.244 Sum_probs=182.1
Q ss_pred cccceeeeeccCCCCccc-------------ccCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCCeEEeEeeecccc
Q 015438 103 DCCHMLSRYLPVNGPWPV-------------DQTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSL 168 (407)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~-------------~~h~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 168 (407)
+....+|..........+ .+|...|.+++|+| ++.+|++++.||.|++||+.++....... +
T Consensus 65 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~----~ 140 (408)
T 4a11_B 65 DGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN----F 140 (408)
T ss_dssp TSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE----C
T ss_pred CCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc----C
Confidence 444556655544444443 36999999999999 78899999999999999999986554432 3
Q ss_pred ceEEEEEEECCC---CCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCC-EEEE
Q 015438 169 RWTVTDTSLSPD---QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR-ELVA 244 (407)
Q Consensus 169 ~~~v~~~~~sp~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~ 244 (407)
...+.++.|+|. +.++++++.++.|++||+.++....... +|...|.+++|+|+++ +|++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~----------------~~~~~v~~~~~~~~~~~ll~~ 204 (408)
T 4a11_B 141 EETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQ----------------GHRQEILAVSWSPRYDYILAT 204 (408)
T ss_dssp SSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEEC----------------CCCSCEEEEEECSSCTTEEEE
T ss_pred CCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeec----------------CCCCcEEEEEECCCCCcEEEE
Confidence 446889999884 4599999999999999998876543322 3666899999999998 5899
Q ss_pred eeCCCeEEEEEcCCCe-eeeee---------------eccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccC-----
Q 015438 245 GSSDDCIYVYDLEANK-LSLRI---------------LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLN----- 303 (407)
Q Consensus 245 ~~~dg~i~i~d~~~~~-~~~~~---------------~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~----- 303 (407)
|+.||.|++||+++++ .+..+ ..|...|.+++|+ +++++|++++.|+.|++||++...
T Consensus 205 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 283 (408)
T 4a11_B 205 ASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFT-SDGLHLLTVGTDNRMRLWNSSNGENTLVN 283 (408)
T ss_dssp EETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCCBCCCC
T ss_pred EcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEc-CCCCEEEEecCCCeEEEEECCCCccceec
Confidence 9999999999998765 33333 5788999999998 789999999999999999987421
Q ss_pred --------------------------------------CCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEEC
Q 015438 304 --------------------------------------VKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDI 345 (407)
Q Consensus 304 --------------------------------------~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~ 345 (407)
..++++..+.+|...|++++|+|++++|++++.||.|++||+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~ 363 (408)
T 4a11_B 284 YGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVP 363 (408)
T ss_dssp CCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred cccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeC
Confidence 133566777889999999999999999999999999999999
Q ss_pred CCCCCcccc
Q 015438 346 RKMSSNASC 354 (407)
Q Consensus 346 ~~~~~~~~~ 354 (407)
++.+.+...
T Consensus 364 ~~~~~~~~~ 372 (408)
T 4a11_B 364 SLYEPVPDD 372 (408)
T ss_dssp CC-------
T ss_pred CCCCccCCC
Confidence 998776543
No 110
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=3e-30 Score=234.05 Aligned_cols=252 Identities=11% Similarity=0.060 Sum_probs=198.6
Q ss_pred ccccceeeeeccCC---CCcccccCCCceEEEEECCCCC-EEEEEeCCCeEEEEEc-CCCeEEeEeeeccc--cceEEEE
Q 015438 102 ADCCHMLSRYLPVN---GPWPVDQTTSRAYVSQFSADGS-LFVAGFQASQIRIYDV-ERGWKIQKDILAKS--LRWTVTD 174 (407)
Q Consensus 102 ~~~~~~~~~~~~~~---~~~~~~~h~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~-~~~~~~~~~~~~~~--~~~~v~~ 174 (407)
.+....+|...... ....+.+|...|.+++|+|+++ +|++|+.||.|++||+ .++.. ..... |...|.+
T Consensus 31 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~----~~~~~~~~~~~v~~ 106 (342)
T 1yfq_A 31 WDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF----QALTNNEANLGICR 106 (342)
T ss_dssp TTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE----EECBSCCCCSCEEE
T ss_pred CCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce----EeccccCCCCceEE
Confidence 34445566554443 1445568999999999999999 9999999999999999 87643 23445 7888999
Q ss_pred EEECCCCCeEEEEeCCCeEEEEECCC---------CceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEe
Q 015438 175 TSLSPDQRHLVYASMSPIVHIVDVGS---------GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG 245 (407)
Q Consensus 175 ~~~sp~~~~l~~~~~dg~i~vwd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 245 (407)
++|+| +++|++++.|+.|++||+.+ ++..... .+...|.+++|+|++ ++++
T Consensus 107 l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-----------------~~~~~v~~~~~~~~~--l~~~ 166 (342)
T 1yfq_A 107 ICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT-----------------KVKNKIFTMDTNSSR--LIVG 166 (342)
T ss_dssp EEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS-----------------SSCCCEEEEEECSSE--EEEE
T ss_pred EEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEE-----------------eeCCceEEEEecCCc--EEEE
Confidence 99999 99999999999999999875 3322221 144589999999887 9999
Q ss_pred eCCCeEEEEEcCC-Ce--eeeeeeccCCCeEEEEecCC-CCCEEEEEeCCCcEEEEeCccc--CCCCceeeeeccccC--
Q 015438 246 SSDDCIYVYDLEA-NK--LSLRILAHTSDVNTVCFGDE-SGHLIYSGSDDNLCKVWDRRCL--NVKGKPAGVLMGHLE-- 317 (407)
Q Consensus 246 ~~dg~i~i~d~~~-~~--~~~~~~~~~~~v~~i~~s~~-~~~~l~s~~~d~~i~vwd~~~~--~~~~~~~~~~~~~~~-- 317 (407)
+.|+.|++||+++ +. .......|...+.+++|+ + +++++++++.||.|++||++.. ....+....+.+|..
T Consensus 167 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (342)
T 1yfq_A 167 MNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALL-PKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL 245 (342)
T ss_dssp ESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEEC-SGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCT
T ss_pred eCCCeEEEEECCccccccceeeecCCCCceeEEEEC-CCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccc
Confidence 9999999999998 54 233444688899999998 6 8899999999999999999722 101267777887765
Q ss_pred -------CeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCccc-cccceeeeCCCCCCccCC-CCCcc
Q 015438 318 -------GITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSY-EWDYRWMDYPPQARDLKH-PCDQS 384 (407)
Q Consensus 318 -------~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~-~~~~~ 384 (407)
.|++++|+|++++|++++.||.|++||+++++.+..+ ..+ ...+..+. |++++|++ +.|+.
T Consensus 246 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~----~~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 246 KDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNF----AKFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp TCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC----CCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred cccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhh----hcccCCCceEec--CCCCeEEEEecCCc
Confidence 9999999999999999999999999999998776554 233 56677777 77776654 45665
No 111
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.2e-31 Score=244.20 Aligned_cols=237 Identities=11% Similarity=0.023 Sum_probs=180.8
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCC
Q 015438 122 QTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSG 201 (407)
Q Consensus 122 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~ 201 (407)
.....|.+++|+|||+++|+++.|++|+ |...+.. ..+|...|.+++|+|+| .++.+.+|+.+..
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~------l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~ 77 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKD------INCNSKNLFHVKEFPLE-------FENKLDFELAQQN 77 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSC------CSSBGGGTEEEEEECCC-------CCCTTTTSCCCSS
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--cccccce------ecCCCccEEEEEECCCC-------CcceEEEEeCCCc
Confidence 3467899999999999999999999999 7555422 25788899999999998 4555555544322
Q ss_pred ceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCC-----CeEEEE
Q 015438 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTS-----DVNTVC 276 (407)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-----~v~~i~ 276 (407)
. .... .+...|.+++|+|+|.+||+++.||.|++||... ++..+. |.. .|.+++
T Consensus 78 ~---~~~~---------------~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~sva 136 (588)
T 2j04_A 78 G---LLNS---------------QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFE 136 (588)
T ss_dssp C---SSTT---------------SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEE
T ss_pred e---Eeec---------------CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEE
Confidence 2 2221 1234799999999999999999999999999654 666666 665 499999
Q ss_pred ecCCCCCEEEEEeCCCcEEEEeCcccCCCCc-------eeeee----ccccCCeEEEEecCCCCEEEEEeCCCcEEEEEC
Q 015438 277 FGDESGHLIYSGSDDNLCKVWDRRCLNVKGK-------PAGVL----MGHLEGITFIDSRGDGRYLISNGKDQAIKLWDI 345 (407)
Q Consensus 277 ~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~-------~~~~~----~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~ 345 (407)
|| |+|++|++|+.||+|++||+. .+. .+..+ .+|...|.+++|+|+| +++++.|++|++||+
T Consensus 137 fS-PDG~~LAsgs~DGtVkIWd~~----~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~ 209 (588)
T 2j04_A 137 WN-PIESSIVVGNEDGELQFFSIR----KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTV 209 (588)
T ss_dssp EC-SSSSCEEEEETTSEEEEEECC----CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECC
T ss_pred Ec-CCCCEEEEEcCCCEEEEEECC----CCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEEC
Confidence 98 899999999999999999997 443 35665 6788899999999999 888999999999999
Q ss_pred CCCCCcc---cccCCCccccccceeeeCCCCCCccCCCCCcceEEEeCCccc---------eeeEEEee--CCCC
Q 015438 346 RKMSSNA---SCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVL---------RTLIRCHF--SPVY 406 (407)
Q Consensus 346 ~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~gh~~~---------~~~~~~~f--sp~~ 406 (407)
...+... ++ ...+...|..++|+ +..|++++++.|++|+..+.. ..+..+.| |||.
T Consensus 210 ~~~~~~~~~~tL---~~~h~~~V~svaFs--g~~LASa~~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~ 279 (588)
T 2j04_A 210 SASSHQPVSRMI---QNASRRKITDLKIV--DYKVVLTCPGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKES 279 (588)
T ss_dssp CSSSSCCCEEEE---ECCCSSCCCCEEEE--TTEEEEECSSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSC
T ss_pred CCCccccceeee---cccccCcEEEEEEE--CCEEEEEeCCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCC
Confidence 8876421 11 12344567777887 467776678899999743221 15566778 8875
No 112
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=8.6e-30 Score=249.30 Aligned_cols=246 Identities=11% Similarity=0.076 Sum_probs=203.5
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCC----eEEeEeeeccccceE-EEEEEECC--CCCeEEEEeCCCeEE
Q 015438 122 QTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERG----WKIQKDILAKSLRWT-VTDTSLSP--DQRHLVYASMSPIVH 194 (407)
Q Consensus 122 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~~~~-v~~~~~sp--~~~~l~~~~~dg~i~ 194 (407)
.|.+.|.+++|+|+|++|++++ ++.|+|||+.++ .... ....|... |++++|+| ++++|++++.||.|+
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~---~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~ 91 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVV---QFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVI 91 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEE---EECTTTTSCEEEEEECSSTTCCEEEEEETTSEEE
T ss_pred CccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccce---EEecCCCceEEEEEECcCCCCCEEEEecCCCEEE
Confidence 6789999999999999999998 789999999876 4333 35668888 99999999 999999999999999
Q ss_pred EEECCCC------ceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCC----CeEEEEEcCCCeeeee
Q 015438 195 IVDVGSG------TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD----DCIYVYDLEANKLSLR 264 (407)
Q Consensus 195 vwd~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~i~d~~~~~~~~~ 264 (407)
+||+.++ ........ .+|...|.+++|+|++++|++++.+ +.|++|| .++.+..
T Consensus 92 vw~~~~~~~~~~~~~~~~~~~--------------~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~ 155 (615)
T 1pgu_A 92 VWGWTFDKESNSVEVNVKSEF--------------QVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGE 155 (615)
T ss_dssp EEEEEEEGGGTEEEEEEEEEE--------------ECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEE
T ss_pred EEeCCCCcccccccccccchh--------------hcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCccee
Confidence 9999755 11111111 1355689999999999999999987 6889998 5677888
Q ss_pred eeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccC---CeEEEEecCC-CCEEEEEeCCCcE
Q 015438 265 ILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLE---GITFIDSRGD-GRYLISNGKDQAI 340 (407)
Q Consensus 265 ~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~---~i~~~~~s~~-~~~l~s~~~dg~i 340 (407)
+..|...|.+++|+|....++++++.|+.|++||++ .++.+..+.+|.. .|++++|+|+ +++|++++.||.|
T Consensus 156 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 231 (615)
T 1pgu_A 156 VSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGP----PFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKI 231 (615)
T ss_dssp CCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETT----TBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCE
T ss_pred eecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCC----CcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeE
Confidence 889999999999994433489999999999999998 8888999999999 9999999999 9999999999999
Q ss_pred EEEECCCCCCcccccCCCccccccceeeeCCCCCCccC-CCCCcceEEEeCCc
Q 015438 341 KLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLK-HPCDQSVATYKGHS 392 (407)
Q Consensus 341 ~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~v~~~~gh~ 392 (407)
++||+++++....+......+...+..+.|+ ++.+++ .+.|+.+++|+-.+
T Consensus 232 ~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~ 283 (615)
T 1pgu_A 232 SCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTT 283 (615)
T ss_dssp EEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTT
T ss_pred EEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCC
Confidence 9999999877665421111566778889999 776665 45678899998653
No 113
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8e-30 Score=231.71 Aligned_cols=265 Identities=11% Similarity=0.069 Sum_probs=189.5
Q ss_pred ccccceeeeeccCCCCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCC---------CeEEeEeeeccccceEE
Q 015438 102 ADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVER---------GWKIQKDILAKSLRWTV 172 (407)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~~~~~~~v 172 (407)
.+....+|+....+....+. ...|.++.|+|+ +++++.|+.|++|+... +..+.. ....|..+|
T Consensus 56 ~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~--~~~~~~~~v 128 (343)
T 3lrv_A 56 EDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLRE--IEVDSANEI 128 (343)
T ss_dssp ETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEE--EECCCSSCE
T ss_pred CCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEE--eecCCCCCE
Confidence 34445566555444443333 467778889988 99999999999998763 221222 122455679
Q ss_pred EEEEECC--CCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCe
Q 015438 173 TDTSLSP--DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDC 250 (407)
Q Consensus 173 ~~~~~sp--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 250 (407)
.+++|+| ++++|++++.||.|++||+++++....... .+...|.+++|+|++.+|++|+.||.
T Consensus 129 ~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~---------------~~~~~i~~~~~~pdg~~lasg~~dg~ 193 (343)
T 3lrv_A 129 IYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA---------------KSDVEYSSGVLHKDSLLLALYSPDGI 193 (343)
T ss_dssp EEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC---------------CSSCCCCEEEECTTSCEEEEECTTSC
T ss_pred EEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec---------------CCCCceEEEEECCCCCEEEEEcCCCE
Confidence 9999999 999999999999999999998876332211 23346999999999999999999999
Q ss_pred EEEEEcCCCeee-eeeec-cCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeecc---ccCCeE--EEE
Q 015438 251 IYVYDLEANKLS-LRILA-HTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMG---HLEGIT--FID 323 (407)
Q Consensus 251 i~i~d~~~~~~~-~~~~~-~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~---~~~~i~--~~~ 323 (407)
|++||+++++.+ ..+.. |.++|.+++|+ +++.+|++++ |+.|++||++ ..+.+..+.. |...+. +++
T Consensus 194 i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs-~~g~~l~s~~-~~~v~iwd~~----~~~~~~~~~~~~~~~~~~~~~~~~ 267 (343)
T 3lrv_A 194 LDVYNLSSPDQASSRFPVDEEAKIKEVKFA-DNGYWMVVEC-DQTVVCFDLR----KDVGTLAYPTYTIPEFKTGTVTYD 267 (343)
T ss_dssp EEEEESSCTTSCCEECCCCTTSCEEEEEEC-TTSSEEEEEE-SSBEEEEETT----SSTTCBSSCCCBC-----CCEEEE
T ss_pred EEEEECCCCCCCccEEeccCCCCEEEEEEe-CCCCEEEEEe-CCeEEEEEcC----CCCcceeecccccccccccceEEE
Confidence 999999999887 77887 99999999998 7899999999 5599999998 5554444332 444444 699
Q ss_pred ecCCCCEEEEEeC-CCcEEEEECCCCCCcccccCCCccccccceeeeCCC---CCCcc-CCCCCcceEEEeCCccceeeE
Q 015438 324 SRGDGRYLISNGK-DQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPP---QARDL-KHPCDQSVATYKGHSVLRTLI 398 (407)
Q Consensus 324 ~s~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l-~~~~~~~v~~~~gh~~~~~~~ 398 (407)
|+|+|++|++++. |+.|++|++.+....... .++..+.|++ +.+.+ ++..|+.+.++-...+ ...
T Consensus 268 ~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~--~~~ 337 (343)
T 3lrv_A 268 IDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK--------DEESALCLQSDTADFTDMDVVCGDGGIAAILKTND--SFN 337 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTTCSEEE--------EEEEECCC----CCCCEEEEEEETTEEEEEEECSS--EEE
T ss_pred ECCCCCEEEEecCCCCcEEEEEEcccccceEe--------cCceeEecCccccccceeEEEecCCceEEEEecCC--eEe
Confidence 9999999999998 999999999775543221 3456677776 55444 4555677766644433 233
Q ss_pred EEeeCC
Q 015438 399 RCHFSP 404 (407)
Q Consensus 399 ~~~fsp 404 (407)
-+.++|
T Consensus 338 i~~l~p 343 (343)
T 3lrv_A 338 IVALTP 343 (343)
T ss_dssp EEEEEC
T ss_pred EEEcCC
Confidence 345554
No 114
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=1e-28 Score=232.50 Aligned_cols=246 Identities=20% Similarity=0.251 Sum_probs=205.5
Q ss_pred ccccceeeeeccCCCCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCC
Q 015438 102 ADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQ 181 (407)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 181 (407)
.+....+|+....+....+.+|...|.+++|+ ++.+++|+.||.|++||+.++..+.. ...|...|.++.| ++
T Consensus 177 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~---~~~~~~~v~~~~~--~~ 249 (445)
T 2ovr_B 177 TDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHV---LMGHVAAVRCVQY--DG 249 (445)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEE---EECCSSCEEEEEE--CS
T ss_pred CCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEE---EcCCcccEEEEEE--CC
Confidence 34455566666666667788999999999995 57899999999999999998865544 3457778999999 78
Q ss_pred CeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCee
Q 015438 182 RHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL 261 (407)
Q Consensus 182 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~ 261 (407)
+++++++.||.|++||+.+++...... +|...|.++.| ++.++++|+.||.|++||+++++.
T Consensus 250 ~~l~~~~~dg~i~iwd~~~~~~~~~~~----------------~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~ 311 (445)
T 2ovr_B 250 RRVVSGAYDFMVKVWDPETETCLHTLQ----------------GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNC 311 (445)
T ss_dssp SCEEEEETTSCEEEEEGGGTEEEEEEC----------------CCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCE
T ss_pred CEEEEEcCCCEEEEEECCCCcEeEEec----------------CCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCE
Confidence 899999999999999998776543322 36668999999 788999999999999999999999
Q ss_pred eeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeecc---ccCCeEEEEecCCCCEEEEEeCCC
Q 015438 262 SLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMG---HLEGITFIDSRGDGRYLISNGKDQ 338 (407)
Q Consensus 262 ~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~s~~~dg 338 (407)
+..+..|...+.++.++ ++++++|+.||.|++||++ .++++..+.+ |...|++++|+ +++|++|+.||
T Consensus 312 ~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~vwd~~----~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg 382 (445)
T 2ovr_B 312 IHTLTGHQSLTSGMELK---DNILVSGNADSTVKIWDIK----TGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDG 382 (445)
T ss_dssp EEEECCCCSCEEEEEEE---TTEEEEEETTSCEEEEETT----TCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTS
T ss_pred EEEEcCCcccEEEEEEe---CCEEEEEeCCCeEEEEECC----CCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCC
Confidence 99999999999998885 5699999999999999998 7888888876 88899999995 68999999999
Q ss_pred cEEEEECCCCCCcccccC-CCccccccceeeeCCCCCCccCCCC
Q 015438 339 AIKLWDIRKMSSNASCNL-GFRSYEWDYRWMDYPPQARDLKHPC 381 (407)
Q Consensus 339 ~i~iwd~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~ 381 (407)
.|++||+++++.+..+.. ....+...+..++|+|++.++++++
T Consensus 383 ~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~ 426 (445)
T 2ovr_B 383 TVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGS 426 (445)
T ss_dssp EEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEEC
T ss_pred eEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcc
Confidence 999999999887665521 1245667789999999998887654
No 115
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.4e-29 Score=250.93 Aligned_cols=200 Identities=13% Similarity=0.112 Sum_probs=153.8
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCC
Q 015438 122 QTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSG 201 (407)
Q Consensus 122 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~ 201 (407)
.|...|.+++|+| |++|++++.|+.|+|||+.++..+.... +...|++++|+|++++|++|+.||.|++||+.++
T Consensus 56 ~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~----~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~ 130 (902)
T 2oaj_A 56 EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF----VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRD 130 (902)
T ss_dssp SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE----CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTT
T ss_pred CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc----CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCC
Confidence 4788999999999 8899999999999999999886665432 4457999999999999999999999999999987
Q ss_pred ceeccccccccccceeeeecCCCCccccEEEEEEeCC-CCEEEEeeCCCeEEEEEcCCCeeeeeeecc------------
Q 015438 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-GRELVAGSSDDCIYVYDLEANKLSLRILAH------------ 268 (407)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------------ 268 (407)
..... ....... ......+|...|.+++|+|+ +..|++|+.||.| +||+++++++..+..|
T Consensus 131 ~~~~~-~i~~~~~----~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~ 204 (902)
T 2oaj_A 131 QLSSF-KLDNLQK----SSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSE 204 (902)
T ss_dssp EEEEE-EECCHHH----HHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCC
T ss_pred ccccc-eeccccc----cccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCccccc
Confidence 65311 1000000 00112457789999999996 4689999999999 9999999988877655
Q ss_pred ------CCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeee--e---cc-------------ccCCeEEEEe
Q 015438 269 ------TSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGV--L---MG-------------HLEGITFIDS 324 (407)
Q Consensus 269 ------~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~--~---~~-------------~~~~i~~~~~ 324 (407)
...|.+++|+ +++++|++++.|+.|++||++ +++++.. + .. |..+|++++|
T Consensus 205 ~~~~~h~~~V~~v~fs-pdg~~lasgs~Dg~i~lWd~~----~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w 279 (902)
T 2oaj_A 205 KTNEKRTPKVIQSLYH-PNSLHIITIHEDNSLVFWDAN----SGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYW 279 (902)
T ss_dssp CTTSCBCCCEEEEEEC-TTSSEEEEEETTCCEEEEETT----TCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEE
T ss_pred ccccccCCCeEEEEEc-CCCCEEEEEECCCeEEEEECC----CCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEE
Confidence 4779999998 789999999999999999998 5555442 2 11 3446888888
Q ss_pred c----CCC-CEEEEEeCC
Q 015438 325 R----GDG-RYLISNGKD 337 (407)
Q Consensus 325 s----~~~-~~l~s~~~d 337 (407)
+ |++ .+|++|+.|
T Consensus 280 ~~~~~pd~~~ll~sg~~~ 297 (902)
T 2oaj_A 280 MCENNPEYTSLLISHKSI 297 (902)
T ss_dssp EECSSTTEEEEEEEEECS
T ss_pred EecCCCCCCEEEEeCCCC
Confidence 4 433 345555443
No 116
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=2.1e-28 Score=229.70 Aligned_cols=230 Identities=24% Similarity=0.339 Sum_probs=192.5
Q ss_pred ccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCC
Q 015438 121 DQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGS 200 (407)
Q Consensus 121 ~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~ 200 (407)
.+|...|.+++| ++++|++|+.||.|++||+.++..... ..+|...|.+++| ++++|++|+.||.|++||+.+
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~---~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~ 202 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRI---LTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNT 202 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEE---ECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSS
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEE---EcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCC
Confidence 456778998887 789999999999999999998865543 4568888999998 788999999999999999998
Q ss_pred CceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeee---eeeeccCCCeEEEEe
Q 015438 201 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLS---LRILAHTSDVNTVCF 277 (407)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~v~~i~~ 277 (407)
++...... +|...|.+++|+ +.++++|+.||.|++||+.+++.. ..+.+|...|.+++|
T Consensus 203 ~~~~~~~~----------------~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 264 (435)
T 1p22_A 203 GEMLNTLI----------------HHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF 264 (435)
T ss_dssp CCEEEEEC----------------CCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE
T ss_pred CcEEEEEc----------------CCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe
Confidence 87644332 366689999997 459999999999999999988755 567789999999999
Q ss_pred cCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCC
Q 015438 278 GDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLG 357 (407)
Q Consensus 278 s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 357 (407)
+++++++|+.||.|++||++ .++.+..+.+|...|.+++| ++.+|++|+.||.|++||+++++.+..+
T Consensus 265 ---~~~~l~s~~~dg~i~vwd~~----~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~--- 332 (435)
T 1p22_A 265 ---DDKYIVSASGDRTIKVWNTS----TCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVL--- 332 (435)
T ss_dssp ---ETTEEEEEETTSEEEEEETT----TCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEE---
T ss_pred ---CCCEEEEEeCCCeEEEEECC----cCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEE---
Confidence 47899999999999999998 88899999999999999999 5789999999999999999998776554
Q ss_pred CccccccceeeeCCCCCCccCCCCCcceEEEe
Q 015438 358 FRSYEWDYRWMDYPPQARDLKHPCDQSVATYK 389 (407)
Q Consensus 358 ~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~ 389 (407)
..+...+.++.| ....+++.+.|+.|++|+
T Consensus 333 -~~h~~~v~~~~~-~~~~l~sg~~dg~i~vwd 362 (435)
T 1p22_A 333 -EGHEELVRCIRF-DNKRIVSGAYDGKIKVWD 362 (435)
T ss_dssp -CCCSSCEEEEEC-CSSEEEEEETTSCEEEEE
T ss_pred -eCCcCcEEEEEe-cCCEEEEEeCCCcEEEEE
Confidence 345566788888 223455556788888886
No 117
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.6e-29 Score=249.50 Aligned_cols=231 Identities=15% Similarity=0.183 Sum_probs=187.2
Q ss_pred cccceeeeec--cCCCCcccccCCCceEEEEECCC--CCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEEC
Q 015438 103 DCCHMLSRYL--PVNGPWPVDQTTSRAYVSQFSAD--GSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLS 178 (407)
Q Consensus 103 ~~~~~~~~~~--~~~~~~~~~~h~~~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s 178 (407)
+....+|... .......+.+|.+.|.+++|+|+ +++|++|+.||.|++||+.++.. ........|...|++++|+
T Consensus 30 dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~-~~~~~~~~h~~~V~~v~~s 108 (753)
T 3jro_A 30 DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW-SQIAVHAVHSASVNSVQWA 108 (753)
T ss_dssp TTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEEC
T ss_pred CCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcc-cccccccCCCCCeEEEEEC
Confidence 4445566654 33445567899999999999998 99999999999999999998742 2333456688899999999
Q ss_pred CC--CCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeC-------------CCCEEE
Q 015438 179 PD--QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-------------DGRELV 243 (407)
Q Consensus 179 p~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-------------~~~~l~ 243 (407)
|+ ++.+++|+.||.|++||+.++........ .+|...|.+++|+| ++.+|+
T Consensus 109 p~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~--------------~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~ 174 (753)
T 3jro_A 109 PHEYGPLLLVASSDGKVSVVEFKENGTTSPIII--------------DAHAIGVNSASWAPATIEEDGEHNGTKESRKFV 174 (753)
T ss_dssp CGGGCSEEEEEETTSEEEEEECCSSSCCCCEEE--------------ECCSSCEEEEEECCCC---------CGGGCCEE
T ss_pred CCCCCCEEEEEeCCCcEEEEEeecCCCcceeEe--------------ecCCCceEEEEecCcccccccccccCCCCCEEE
Confidence 99 99999999999999999987744322211 13666899999999 589999
Q ss_pred EeeCCCeEEEEEcCCC----eeeeeeeccCCCeEEEEecCCC--CCEEEEEeCCCcEEEEeCcccCCC-Cceeeeecccc
Q 015438 244 AGSSDDCIYVYDLEAN----KLSLRILAHTSDVNTVCFGDES--GHLIYSGSDDNLCKVWDRRCLNVK-GKPAGVLMGHL 316 (407)
Q Consensus 244 ~~~~dg~i~i~d~~~~----~~~~~~~~~~~~v~~i~~s~~~--~~~l~s~~~d~~i~vwd~~~~~~~-~~~~~~~~~~~ 316 (407)
+|+.||.|++||++++ .....+.+|...|.+++|+|.. +++|++|+.||.|++||++..... ...+.....|.
T Consensus 175 sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~ 254 (753)
T 3jro_A 175 TGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFP 254 (753)
T ss_dssp EEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCS
T ss_pred EEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCC
Confidence 9999999999999877 5566778899999999999433 899999999999999999832100 11334445688
Q ss_pred CCeEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 015438 317 EGITFIDSRGDGRYLISNGKDQAIKLWDIRKM 348 (407)
Q Consensus 317 ~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 348 (407)
..|++++|+|+|++|++++.||.|++||++..
T Consensus 255 ~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 255 DVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp SCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred CceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 89999999999999999999999999999854
No 118
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=1.9e-28 Score=215.10 Aligned_cols=199 Identities=13% Similarity=0.086 Sum_probs=143.1
Q ss_pred CCceEEEEECCC----CCEEEEEeC--------------------CCeEEEEEcCC-CeEEeEeeeccccceEEEEEEEC
Q 015438 124 TSRAYVSQFSAD----GSLFVAGFQ--------------------ASQIRIYDVER-GWKIQKDILAKSLRWTVTDTSLS 178 (407)
Q Consensus 124 ~~~v~~~~~s~~----~~~l~~~~~--------------------dg~i~iwd~~~-~~~~~~~~~~~~~~~~v~~~~~s 178 (407)
...|++++|+|+ ++++++++. |+.|++|++.. ++.+.. ...|...++.++|+
T Consensus 111 ~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s---~~~~~~~v~~l~fs 187 (356)
T 2w18_A 111 IREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKEN---QFLMPPEETILTFA 187 (356)
T ss_dssp EEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEE---EEECCCSSCEEEEE
T ss_pred ccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeee---eccCCCceeeEEee
Confidence 346778888888 777777653 66666666633 432222 12333345666666
Q ss_pred C---CCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEE------------E
Q 015438 179 P---DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL------------V 243 (407)
Q Consensus 179 p---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l------------~ 243 (407)
| ++.+|++++.|++|+|||+.+++....+... ..+...+.+++|+|+|.++ +
T Consensus 188 ~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~-------------~~~v~~v~~vafSpdG~~lvs~s~~~~~w~la 254 (356)
T 2w18_A 188 EVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHID-------------DSYQASVCHKAYSEMGLLFIVLSHPCAKESES 254 (356)
T ss_dssp EEETSTTEEEEEETTSEEEEEETTTCCEEEEEECC-------------C---CCCEEEEEEETTEEEEEEC---------
T ss_pred ccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCC-------------CcceeeeEEEEECCCCCEEEEeccCCCcceee
Confidence 6 6678999999999999999999876654311 0123368888999999876 5
Q ss_pred EeeCCCeEEEEEcCCCeeeeee-----eccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCC
Q 015438 244 AGSSDDCIYVYDLEANKLSLRI-----LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEG 318 (407)
Q Consensus 244 ~~~~dg~i~i~d~~~~~~~~~~-----~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 318 (407)
+|+.|++|++||..+++.+..+ .+|...+.+..++ +.++++++.|++|+|||+. +++++.++.+|...
T Consensus 255 SGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s---g~~lASgS~DgTIkIWDl~----tGk~l~tL~gH~~~ 327 (356)
T 2w18_A 255 LRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK---DHCAAAILTSGTIAIWDLL----LGQCTALLPPVSDQ 327 (356)
T ss_dssp ---CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE---TTEEEEEETTSCEEEEETT----TCSEEEEECCC--C
T ss_pred ccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC---CCEEEEEcCCCcEEEEECC----CCcEEEEecCCCCC
Confidence 6788999999999999887655 2555555544443 7789999999999999998 89999999999876
Q ss_pred eE-EEEecCCCCEEEEEeCCCcEEEEEC
Q 015438 319 IT-FIDSRGDGRYLISNGKDQAIKLWDI 345 (407)
Q Consensus 319 i~-~~~~s~~~~~l~s~~~dg~i~iwd~ 345 (407)
+. .++|+|||++|++|+.|++|+|||+
T Consensus 328 vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 328 HWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred eEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 55 6899999999999999999999996
No 119
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=1.4e-28 Score=227.59 Aligned_cols=238 Identities=12% Similarity=0.051 Sum_probs=161.2
Q ss_pred ccccceeeeeccCC-----CCcccccCCCceEEEEECC--------CCCEEEEEeCCCeEEEEEcCCCeEEeEeeecccc
Q 015438 102 ADCCHMLSRYLPVN-----GPWPVDQTTSRAYVSQFSA--------DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSL 168 (407)
Q Consensus 102 ~~~~~~~~~~~~~~-----~~~~~~~h~~~v~~~~~s~--------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 168 (407)
.|....+|...... ....+.+|.+.|++++|+| ++++||+|+.|++|+|||+.++.+... ...|
T Consensus 109 ~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~---~~~~ 185 (393)
T 4gq1_A 109 QDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILA---GYPL 185 (393)
T ss_dssp TTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEE---EEEC
T ss_pred CCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeee---ecCC
Confidence 34445555543322 2345789999999999998 889999999999999999988755543 3345
Q ss_pred ceEEEEEEECCCCC-eEEEEeCCCeEEEEECCCCceeccccccc-ccccee--------eeecCCCCccccEEEEEEe-C
Q 015438 169 RWTVTDTSLSPDQR-HLVYASMSPIVHIVDVGSGTMESLANVTE-IHDGLD--------FSAADDGGYSFGIFSLKFS-T 237 (407)
Q Consensus 169 ~~~v~~~~~sp~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~--------~~~~~~~~~~~~v~~~~~s-~ 237 (407)
..+|.+++|+|++. +|++++.|+.|++||+.+++......... ...... .......+|...+.++.|+ |
T Consensus 186 ~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~ 265 (393)
T 4gq1_A 186 SSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGS 265 (393)
T ss_dssp SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETT
T ss_pred CCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecC
Confidence 66799999999874 79999999999999998876532221110 000000 0111224677789999997 7
Q ss_pred CCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEE------------------EecCC-CCCEEEEEeCCCcEEEEe
Q 015438 238 DGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTV------------------CFGDE-SGHLIYSGSDDNLCKVWD 298 (407)
Q Consensus 238 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i------------------~~s~~-~~~~l~s~~~d~~i~vwd 298 (407)
+++.|++++.|+++++||+.+++....+..|...+..+ .|+|+ ++.++++|+.||.|++||
T Consensus 266 dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd 345 (393)
T 4gq1_A 266 DGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLIN 345 (393)
T ss_dssp TTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEE
Confidence 99999999999999999998877665555444333332 33333 344667788899999999
Q ss_pred CcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 015438 299 RRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRK 347 (407)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 347 (407)
+. .+.++..+.+|..+|.+++|+|||++||+++.+| +.+|.+..
T Consensus 346 ~~----~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 346 TY----EKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLMG 389 (393)
T ss_dssp TT----CTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEGG
T ss_pred CC----CCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEeC
Confidence 98 7788888888999999999999999999998655 77776654
No 120
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=6e-28 Score=220.69 Aligned_cols=239 Identities=13% Similarity=0.049 Sum_probs=184.3
Q ss_pred cccceeeeecc-CCCC-cccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEE--C
Q 015438 103 DCCHMLSRYLP-VNGP-WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSL--S 178 (407)
Q Consensus 103 ~~~~~~~~~~~-~~~~-~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~--s 178 (407)
+....+|+... .... ..+.+|...|.+++|+|++++|++++.||.|++||+.++.... ...|...|.+++| +
T Consensus 63 dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~----~~~~~~~v~~~~~~~~ 138 (368)
T 3mmy_A 63 ANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ----IAQHDAPVKTIHWIKA 138 (368)
T ss_dssp TSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE----EEECSSCEEEEEEEEC
T ss_pred CCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee----eccccCceEEEEEEeC
Confidence 44556666654 2222 5678899999999999999999999999999999999885443 3347778999999 9
Q ss_pred CCCCeEEEEeCCCeEEEEECCCCceecccccccccccee----------------e---------eecCCCCccccEEEE
Q 015438 179 PDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLD----------------F---------SAADDGGYSFGIFSL 233 (407)
Q Consensus 179 p~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~----------------~---------~~~~~~~~~~~v~~~ 233 (407)
|++++|++++.|+.|++||+.+++............... + .......+...+.++
T Consensus 139 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (368)
T 3mmy_A 139 PNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCV 218 (368)
T ss_dssp SSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEE
T ss_pred CCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceE
Confidence 999999999999999999999876544333211000000 0 000011122345666
Q ss_pred EEeCCCCE----EEEeeCCCeEEEEEcCCC---eeeeeeeccCC------------CeEEEEecCCCCCEEEEEeCCCcE
Q 015438 234 KFSTDGRE----LVAGSSDDCIYVYDLEAN---KLSLRILAHTS------------DVNTVCFGDESGHLIYSGSDDNLC 294 (407)
Q Consensus 234 ~~s~~~~~----l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~------------~v~~i~~s~~~~~~l~s~~~d~~i 294 (407)
.+.++... +++++.||.|++||++.. +.+..+..|.. .|.+++|+ +++++|++++.||.|
T Consensus 219 ~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-p~~~~l~s~~~dg~i 297 (368)
T 3mmy_A 219 AIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFH-PVHGTLATVGSDGRF 297 (368)
T ss_dssp EEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEEC-TTTCCEEEEETTSCE
T ss_pred EEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEe-cCCCEEEEEccCCeE
Confidence 66665544 999999999999999987 55666777765 79999998 788999999999999
Q ss_pred EEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCC
Q 015438 295 KVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSS 350 (407)
Q Consensus 295 ~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 350 (407)
++||++ .++++..+.+|...|++++|+|+|++|++++.|+..+.|++...+.
T Consensus 298 ~iwd~~----~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~~~~ 349 (368)
T 3mmy_A 298 SFWDKD----ARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQK 349 (368)
T ss_dssp EEEETT----TTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGCCTTS
T ss_pred EEEECC----CCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccccCCCc
Confidence 999998 8889999999999999999999999999999998766666554433
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=3.6e-26 Score=211.23 Aligned_cols=253 Identities=14% Similarity=0.123 Sum_probs=193.3
Q ss_pred ceeeeeccCCCCcccccCCCceEEEEECCCCCEE-EEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeE
Q 015438 106 HMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLF-VAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHL 184 (407)
Q Consensus 106 ~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 184 (407)
..+|+....+....+..| ..+.+++|+|+|+++ ++++.|+.|++||+.+++....... +. .+.+++|+|++++|
T Consensus 14 v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~---~~-~v~~~~~spdg~~l 88 (391)
T 1l0q_A 14 ISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPA---GS-SPQGVAVSPDGKQV 88 (391)
T ss_dssp EEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEEC---SS-SEEEEEECTTSSEE
T ss_pred EEEEECCCCeEEEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEEC---CC-CccceEECCCCCEE
Confidence 334444333333445555 458999999999987 5666899999999998866554322 22 69999999999988
Q ss_pred EEE-eCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEE-EEeeCCCeEEEEEcCCCeee
Q 015438 185 VYA-SMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL-VAGSSDDCIYVYDLEANKLS 262 (407)
Q Consensus 185 ~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~i~d~~~~~~~ 262 (407)
+++ +.++.|++||+.+++...... +...+.+++|+|+++.| ++++.++.|++||+.+++.+
T Consensus 89 ~~~~~~~~~v~v~d~~~~~~~~~~~-----------------~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 151 (391)
T 1l0q_A 89 YVTNMASSTLSVIDTTSNTVAGTVK-----------------TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI 151 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEE-----------------CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEECCCCEEEEEECCCCeEEEEEe-----------------CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 655 467999999999887644332 11258899999999977 67888999999999999988
Q ss_pred eeeeccCCCeEEEEecCCCCCEE-EEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEe---CCC
Q 015438 263 LRILAHTSDVNTVCFGDESGHLI-YSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNG---KDQ 338 (407)
Q Consensus 263 ~~~~~~~~~v~~i~~s~~~~~~l-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~---~dg 338 (407)
..+..+ ..+.+++|+ ++++.+ ++++.++.|++||++ .++.+..+. +...+.+++|+|++++|++++ .++
T Consensus 152 ~~~~~~-~~~~~~~~~-~dg~~l~~~~~~~~~v~~~d~~----~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~ 224 (391)
T 1l0q_A 152 NTVSVG-RSPKGIAVT-PDGTKVYVANFDSMSISVIDTV----TNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFN 224 (391)
T ss_dssp EEEECC-SSEEEEEEC-TTSSEEEEEETTTTEEEEEETT----TTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCC
T ss_pred EEEecC-CCcceEEEC-CCCCEEEEEeCCCCEEEEEECC----CCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCC
Confidence 887655 467999998 666665 677889999999998 666666655 556789999999999999888 689
Q ss_pred cEEEEECCCCCCcccccCCCccccccceeeeCCCCCCcc--CCCCCcceEEEeCCc
Q 015438 339 AIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDL--KHPCDQSVATYKGHS 392 (407)
Q Consensus 339 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l--~~~~~~~v~~~~gh~ 392 (407)
.|++||+++++....+.. ...+..+.|+|+++.+ +...++.+++|+-.+
T Consensus 225 ~v~~~d~~~~~~~~~~~~-----~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 225 TVSMIDTGTNKITARIPV-----GPDPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp EEEEEETTTTEEEEEEEC-----CSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred cEEEEECCCCeEEEEEec-----CCCccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 999999998876554422 2245788999999765 336688999998654
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=2e-26 Score=215.88 Aligned_cols=241 Identities=15% Similarity=0.128 Sum_probs=194.3
Q ss_pred ccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEE-eCCCeEEEEE
Q 015438 119 PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVD 197 (407)
Q Consensus 119 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~dg~i~vwd 197 (407)
.+.+|.+.|.+++|+|+++++++++.|+.|++||+.++...... ..|...+.+++|+|+++.++++ +.++.|++||
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d 240 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATV---DLTGKWSKILLYDPIRDLVYCSNWISEDISVID 240 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEE---ECSSSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEE---cCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEE
Confidence 45689999999999999999999999999999999987655443 2455679999999999988655 4799999999
Q ss_pred CCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEee--------CCCeEEEEEcCCCeeeeeeeccC
Q 015438 198 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS--------SDDCIYVYDLEANKLSLRILAHT 269 (407)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--------~dg~i~i~d~~~~~~~~~~~~~~ 269 (407)
+.+++....... ...+.+++|+|++++|++++ .|+.|++||+.+++.+..+ .+.
T Consensus 241 ~~~~~~~~~~~~-----------------~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~ 302 (433)
T 3bws_A 241 RKTKLEIRKTDK-----------------IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPP 302 (433)
T ss_dssp TTTTEEEEECCC-----------------CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEE
T ss_pred CCCCcEEEEecC-----------------CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCC
Confidence 988765433321 12589999999999999887 5889999999999877665 556
Q ss_pred CCeEEEEecCCCCC-EEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeC------------
Q 015438 270 SDVNTVCFGDESGH-LIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGK------------ 336 (407)
Q Consensus 270 ~~v~~i~~s~~~~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~------------ 336 (407)
..+.+++|+ ++++ ++++++.|+.|++||+. .++.+..+. +...+.+++|+|+|++|++++.
T Consensus 303 ~~~~~~~~~-~~g~~l~~~~~~~~~v~v~d~~----~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 376 (433)
T 3bws_A 303 GNKRHIVSG-NTENKIYVSDMCCSKIEVYDLK----EKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKK 376 (433)
T ss_dssp ECEEEEEEC-SSTTEEEEEETTTTEEEEEETT----TTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSC
T ss_pred CCcceEEEC-CCCCEEEEEecCCCEEEEEECC----CCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccc
Confidence 688999998 5664 66777899999999998 677776665 6778999999999999988876
Q ss_pred ---CCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCCC--CCcceEEEeCC
Q 015438 337 ---DQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHP--CDQSVATYKGH 391 (407)
Q Consensus 337 ---dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~v~~~~gh 391 (407)
||.|++||+.+++....+.. ...+..++|+|+++.|.++ .++.+.+|+-.
T Consensus 377 g~~dg~v~~~d~~~~~~~~~~~~-----~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 377 GLVLGKVYVIDTTTDTVKEFWEA-----GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp CSSCCEEEEEETTTTEEEEEEEC-----SSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred cccceEEEEEECCCCcEEEEecC-----CCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 57999999998876654422 3356889999999887644 48999999743
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=2.4e-26 Score=201.88 Aligned_cols=251 Identities=12% Similarity=0.115 Sum_probs=163.1
Q ss_pred ceEEEEECCCCC---EEEEEeCCCeEEEEEcCCC---eEEeEeeec----------------------cccceEEEEEEE
Q 015438 126 RAYVSQFSADGS---LFVAGFQASQIRIYDVERG---WKIQKDILA----------------------KSLRWTVTDTSL 177 (407)
Q Consensus 126 ~v~~~~~s~~~~---~l~~~~~dg~i~iwd~~~~---~~~~~~~~~----------------------~~~~~~v~~~~~ 177 (407)
.+.++.|-..|- .++++++ ..|++|+..++ ++++..... .-+...|.++++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~ 119 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFC 119 (356)
T ss_dssp EEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC
T ss_pred EEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEE
Confidence 356666655443 4666655 78999999887 333221111 112346788888
Q ss_pred CCC----CCeEEEEeCCCeEEEEECCCCceecccc--ccccccceeeeecC-----CCCccccEEEEEEeC---CCCEEE
Q 015438 178 SPD----QRHLVYASMSPIVHIVDVGSGTMESLAN--VTEIHDGLDFSAAD-----DGGYSFGIFSLKFST---DGRELV 243 (407)
Q Consensus 178 sp~----~~~l~~~~~dg~i~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~-----~~~~~~~v~~~~~s~---~~~~l~ 243 (407)
+|+ ++.+++++.+ +.+|++.+++...... .........+.... ..+|...+..++|++ ++.+|+
T Consensus 120 spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~La 197 (356)
T 2w18_A 120 SSDDESEKQVLLKSGNI--KAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALL 197 (356)
T ss_dssp ------CCEEEEEEEEE--EEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEE
T ss_pred CCCccccccEEEeCCCe--EEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEE
Confidence 999 8888887742 5556665444322210 00000001110000 013555778888888 778999
Q ss_pred EeeCCCeEEEEEcCCCeeeeeeeccC---CCeEEEEecCCCCCEE------------EEEeCCCcEEEEeCcccCCCCce
Q 015438 244 AGSSDDCIYVYDLEANKLSLRILAHT---SDVNTVCFGDESGHLI------------YSGSDDNLCKVWDRRCLNVKGKP 308 (407)
Q Consensus 244 ~~~~dg~i~i~d~~~~~~~~~~~~~~---~~v~~i~~s~~~~~~l------------~s~~~d~~i~vwd~~~~~~~~~~ 308 (407)
+|+.|++|+|||+++++++.++.+|. ..+.+++|+ +++.++ ++|+.|++|++||.. +++.
T Consensus 198 SgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafS-pdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~----tgk~ 272 (356)
T 2w18_A 198 GTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYS-EMGLLFIVLSHPCAKESESLRSPVFQLIVINPK----TTLS 272 (356)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEE-ETTEEEEEEC------------CCEEEEEEETT----TTEE
T ss_pred EecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEEC-CCCCEEEEeccCCCcceeeccCCCcEEEEEECC----CCEE
Confidence 99999999999999999999998654 357778998 677765 568889999999998 7777
Q ss_pred eeee-----ccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccC-CCCC
Q 015438 309 AGVL-----MGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLK-HPCD 382 (407)
Q Consensus 309 ~~~~-----~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~ 382 (407)
+..+ .+|...+.+..+ ++.++++++.|++|+|||+.+++.+.++. .+....+..++|+|++++|+ .+.|
T Consensus 273 l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~---gH~~~vvs~vafSPDG~~LaSGS~D 347 (356)
T 2w18_A 273 VGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLP---PVSDQHWSFVKWSGTDSHLLAGQKD 347 (356)
T ss_dssp EEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEEC---CC--CCCCEEEECSSSSEEEEECTT
T ss_pred EEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEec---CCCCCeEEEEEECCCCCEEEEEECC
Confidence 6654 467666554444 48899999999999999999998877652 22233455689999998775 5578
Q ss_pred cceEEEe
Q 015438 383 QSVATYK 389 (407)
Q Consensus 383 ~~v~~~~ 389 (407)
++|++|+
T Consensus 348 ~TIklWd 354 (356)
T 2w18_A 348 GNIFVYH 354 (356)
T ss_dssp SCEEEEE
T ss_pred CcEEEec
Confidence 9999996
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=9.4e-26 Score=211.33 Aligned_cols=255 Identities=13% Similarity=0.074 Sum_probs=197.9
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEee--eccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCc
Q 015438 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDI--LAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGT 202 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~ 202 (407)
..+.+++|+|++.++++++.++.|++||+.++....... ....|...|.+++|+|+++++++++.|+.|++||+.+++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~ 202 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA 202 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce
Confidence 456699999977788888888999999999886554322 234677789999999999999999999999999998876
Q ss_pred eeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEE-EeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCC
Q 015438 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELV-AGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDES 281 (407)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~ 281 (407)
...... .|...+.+++|+|+++.++ +++.++.|++||+++++.+..+.. ...+.+++|+ ++
T Consensus 203 ~~~~~~----------------~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~-~~ 264 (433)
T 3bws_A 203 YKATVD----------------LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLPRGLLLS-KD 264 (433)
T ss_dssp EEEEEE----------------CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEEEEEEEC-TT
T ss_pred EEEEEc----------------CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCceEEEEc-CC
Confidence 544332 2444799999999999875 455799999999999998877755 4568999998 78
Q ss_pred CCEEEEEe--------CCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEE-EEEeCCCcEEEEECCCCCCcc
Q 015438 282 GHLIYSGS--------DDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYL-ISNGKDQAIKLWDIRKMSSNA 352 (407)
Q Consensus 282 ~~~l~s~~--------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~s~~~dg~i~iwd~~~~~~~~ 352 (407)
++++++++ .|+.|++||++ .++.+..+ .|...+.+++|+|+++.+ ++++.|+.|++||+++++...
T Consensus 265 g~~l~~~~~~~~~~~~~dg~i~~~d~~----~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~ 339 (433)
T 3bws_A 265 GKELYIAQFSASNQESGGGRLGIYSMD----KEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQK 339 (433)
T ss_dssp SSEEEEEEEESCTTCSCCEEEEEEETT----TTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCEEEEEECCCCccccCCCeEEEEECC----CCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEE
Confidence 88888887 58899999997 66665554 466789999999999755 566889999999999876654
Q ss_pred cccCCCccccccceeeeCCCCCCccCCCC----------------CcceEEEeCCcc--------ceeeEEEeeCCCCC
Q 015438 353 SCNLGFRSYEWDYRWMDYPPQARDLKHPC----------------DQSVATYKGHSV--------LRTLIRCHFSPVYR 407 (407)
Q Consensus 353 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------------~~~v~~~~gh~~--------~~~~~~~~fsp~~~ 407 (407)
.+ .....+..++|+|+++.+.++. |+.|.+|+..+. ...+..+.|+|+.+
T Consensus 340 ~~-----~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~ 413 (433)
T 3bws_A 340 SI-----PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNR 413 (433)
T ss_dssp EE-----ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSC
T ss_pred Ee-----cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCC
Confidence 43 2334577899999998665543 348888875431 12456789999864
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=5.9e-24 Score=196.32 Aligned_cols=223 Identities=15% Similarity=0.079 Sum_probs=172.0
Q ss_pred ccceeeeeccCCCCcccccCCCceEEEEECCCCCEEEEEe-CCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCC
Q 015438 104 CCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGF-QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQR 182 (407)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 182 (407)
....+++....+....+..+. .+.+++|+|++++|++++ .++.|++||+.+++.+.... +...+.+++|+|+++
T Consensus 54 ~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~----~~~~~~~~~~s~dg~ 128 (391)
T 1l0q_A 54 NDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK----TGKSPLGLALSPDGK 128 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE----CSSSEEEEEECTTSS
T ss_pred CeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe----CCCCcceEEECCCCC
Confidence 334444443333333444444 999999999999886554 57999999999886554432 223589999999999
Q ss_pred eE-EEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEE-EEeeCCCeEEEEEcCCCe
Q 015438 183 HL-VYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL-VAGSSDDCIYVYDLEANK 260 (407)
Q Consensus 183 ~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~i~d~~~~~ 260 (407)
.| ++++.++.|++||+.+++....... ...+.+++|+|++++| ++++.++.|++||+++++
T Consensus 129 ~l~~~~~~~~~v~~~d~~~~~~~~~~~~-----------------~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~ 191 (391)
T 1l0q_A 129 KLYVTNNGDKTVSVINTVTKAVINTVSV-----------------GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS 191 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEEC-----------------CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred EEEEEeCCCCEEEEEECCCCcEEEEEec-----------------CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCe
Confidence 87 6777899999999998876543321 1257899999999877 567788999999999998
Q ss_pred eeeeeeccCCCeEEEEecCCCCCEEEEEe---CCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEE-EEEeC
Q 015438 261 LSLRILAHTSDVNTVCFGDESGHLIYSGS---DDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYL-ISNGK 336 (407)
Q Consensus 261 ~~~~~~~~~~~v~~i~~s~~~~~~l~s~~---~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~s~~~ 336 (407)
.+..+. +...+.+++|+ +++++|++++ .++.|++||++ .++.+..+..|. .+.+++|+|++++| ++++.
T Consensus 192 ~~~~~~-~~~~~~~~~~~-~~g~~l~~~~~~~~~~~v~~~d~~----~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~ 264 (391)
T 1l0q_A 192 VIDTVK-VEAAPSGIAVN-PEGTKAYVTNVDKYFNTVSMIDTG----TNKITARIPVGP-DPAGIAVTPDGKKVYVALSF 264 (391)
T ss_dssp EEEEEE-CSSEEEEEEEC-TTSSEEEEEEECSSCCEEEEEETT----TTEEEEEEECCS-SEEEEEECTTSSEEEEEETT
T ss_pred EEEEEe-cCCCccceEEC-CCCCEEEEEecCcCCCcEEEEECC----CCeEEEEEecCC-CccEEEEccCCCEEEEEcCC
Confidence 877764 56688999998 7788888777 68999999998 777787777664 57899999999987 56688
Q ss_pred CCcEEEEECCCCCCccccc
Q 015438 337 DQAIKLWDIRKMSSNASCN 355 (407)
Q Consensus 337 dg~i~iwd~~~~~~~~~~~ 355 (407)
|+.|++||+.+++....+.
T Consensus 265 d~~v~v~d~~~~~~~~~~~ 283 (391)
T 1l0q_A 265 XNTVSVIDTATNTITATMA 283 (391)
T ss_dssp TTEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEECCCCcEEEEEE
Confidence 9999999999887665543
No 126
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.93 E-value=1.9e-24 Score=197.16 Aligned_cols=216 Identities=12% Similarity=0.068 Sum_probs=156.0
Q ss_pred CceEEEEECCCCCEEE-EEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCC-c
Q 015438 125 SRAYVSQFSADGSLFV-AGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSG-T 202 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~-~ 202 (407)
..+..+++.++++.++ +++.|+.|+|||+.++..+.... +...|.++.|+++. ++++ .++.|++||+.++ +
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~----~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~ 131 (355)
T 3vu4_A 59 RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK----VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWK 131 (355)
T ss_dssp SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE----CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCC
T ss_pred CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE----CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCce
Confidence 3588899999988874 56778999999999987665432 34468999998763 3322 3566777776655 2
Q ss_pred eeccccc--------------c-ccccc-e---eee--------------------ecCCCCccccEEEEEEeCCCCEEE
Q 015438 203 MESLANV--------------T-EIHDG-L---DFS--------------------AADDGGYSFGIFSLKFSTDGRELV 243 (407)
Q Consensus 203 ~~~~~~~--------------~-~~~~~-~---~~~--------------------~~~~~~~~~~v~~~~~s~~~~~l~ 243 (407)
....... . ...++ + ++. .....+|...|.+++|+|+|++|+
T Consensus 132 ~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~ 211 (355)
T 3vu4_A 132 RITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVA 211 (355)
T ss_dssp BSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEE
T ss_pred eeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEE
Confidence 2111100 0 00000 0 000 112346888999999999999999
Q ss_pred EeeCCCe-EEEEEcCCCeeeeeee-c-cCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeec-------
Q 015438 244 AGSSDDC-IYVYDLEANKLSLRIL-A-HTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLM------- 313 (407)
Q Consensus 244 ~~~~dg~-i~i~d~~~~~~~~~~~-~-~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~------- 313 (407)
+|+.|++ |++||+++++++..+. + |...|.+++|+ +++++|++++.|+.|++||++.... .....+.
T Consensus 212 s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s-~~~~~l~s~s~d~~v~iw~~~~~~~--~~~~~~~~~~~~~~ 288 (355)
T 3vu4_A 212 TCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWS-TDGSKLAVVSDKWTLHVFEIFNDQD--NKRHALKGWINMKY 288 (355)
T ss_dssp EEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEEC-TTSCEEEEEETTCEEEEEESSCCSC--CCSEETTTTEECCC
T ss_pred EEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEEC-CCCCEEEEEECCCEEEEEEccCCCC--cccccccceeeccc
Confidence 9999998 9999999999999998 5 99999999998 7899999999999999999973211 1111111
Q ss_pred --------------cccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCC
Q 015438 314 --------------GHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSS 350 (407)
Q Consensus 314 --------------~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 350 (407)
........++|++++++|++++.||.+++|++.....
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~ 339 (355)
T 3vu4_A 289 FQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDE 339 (355)
T ss_dssp CCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETT
T ss_pred cccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCC
Confidence 1122346789999999999999999999999987544
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=7e-24 Score=197.34 Aligned_cols=235 Identities=16% Similarity=0.142 Sum_probs=176.2
Q ss_pred cceeeeeccCCCCcccccCCCceEEEEECCCCCEEEEEeCCC---eEEEEEcCCCeEEeEeeeccccceEEEEEEECCCC
Q 015438 105 CHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQAS---QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQ 181 (407)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 181 (407)
...+++. .......+.+|...|.+++|+|+|++|++++.++ .|++||+.++.... ...+...+.+++|+||+
T Consensus 160 ~i~i~d~-~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~----l~~~~~~~~~~~~spdg 234 (415)
T 2hqs_A 160 ELRVSDY-DGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ----VASFPRHNGAPAFSPDG 234 (415)
T ss_dssp EEEEEET-TSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE----EECCSSCEEEEEECTTS
T ss_pred eEEEEcC-CCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE----eecCCCcccCEEEcCCC
Confidence 3445544 3556778889999999999999999999999875 99999999885432 22345579999999999
Q ss_pred CeEE-EEeCCC--eEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCC-C--eEEEEE
Q 015438 182 RHLV-YASMSP--IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-D--CIYVYD 255 (407)
Q Consensus 182 ~~l~-~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g--~i~i~d 255 (407)
+.|+ +++.++ .|++||+.+++...+. .+...+.+++|+|+|++|++++.+ + .|++||
T Consensus 235 ~~la~~~~~~g~~~i~~~d~~~~~~~~l~-----------------~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 235 SKLAFALSKTGSLNLYVMDLASGQIRQVT-----------------DGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp SEEEEEECTTSSCEEEEEETTTCCEEECC-----------------CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CEEEEEEecCCCceEEEEECCCCCEEeCc-----------------CCCCcccceEECCCCCEEEEEECCCCCcEEEEEE
Confidence 9888 555555 5999999887653322 244478999999999999888764 4 788889
Q ss_pred cCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCC---CcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEE
Q 015438 256 LEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDD---NLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLI 332 (407)
Q Consensus 256 ~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d---~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 332 (407)
+.+++. ..+..+...+.+++|+ +++++|++++.+ ..|++||+. .++. ..+..+. .+.+++|+|+|++|+
T Consensus 298 ~~~~~~-~~l~~~~~~~~~~~~s-pdG~~l~~~~~~~g~~~i~~~d~~----~~~~-~~l~~~~-~~~~~~~spdg~~l~ 369 (415)
T 2hqs_A 298 INGGAP-QRITWEGSQNQDADVS-SDGKFMVMVSSNGGQQHIAKQDLA----TGGV-QVLSSTF-LDETPSLAPNGTMVI 369 (415)
T ss_dssp TTSSCC-EECCCSSSEEEEEEEC-TTSSEEEEEEECSSCEEEEEEETT----TCCE-EECCCSS-SCEEEEECTTSSEEE
T ss_pred CCCCCE-EEEecCCCcccCeEEC-CCCCEEEEEECcCCceEEEEEECC----CCCE-EEecCCC-CcCCeEEcCCCCEEE
Confidence 988764 4455677789999998 788888887754 589999997 5554 4455554 899999999999999
Q ss_pred EEeCCC---cEEEEECCCCCCcccccCCCccccccceeeeCCCCC
Q 015438 333 SNGKDQ---AIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQA 374 (407)
Q Consensus 333 s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 374 (407)
+++.++ .|.+||+..... .. ...+...++.++|+|..
T Consensus 370 ~~s~~~~~~~l~~~d~~g~~~-~~----l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 370 YSSSQGMGSVLNLVSTDGRFK-AR----LPATDGQVKFPAWSPYL 409 (415)
T ss_dssp EEEEETTEEEEEEEETTSCCE-EE----CCCSSSEEEEEEECCCC
T ss_pred EEEcCCCccEEEEEECCCCcE-EE----eeCCCCCCcCCcccccc
Confidence 988777 799999874322 11 23344555666666643
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=1.7e-24 Score=201.43 Aligned_cols=253 Identities=15% Similarity=0.108 Sum_probs=185.4
Q ss_pred ccccCCCceEEEEECC--------------CCCEEEEEeCC------CeEEEEEcCCCeEEeEeeeccccceEEEEEEEC
Q 015438 119 PVDQTTSRAYVSQFSA--------------DGSLFVAGFQA------SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLS 178 (407)
Q Consensus 119 ~~~~h~~~v~~~~~s~--------------~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s 178 (407)
.+.+|...+..+++++ .+..++.++.+ +.|++||++.+ .... ...|...+.+++|+
T Consensus 112 ~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~-~~~~---l~~~~~~v~~~~~S 187 (415)
T 2hqs_A 112 SYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGY-NQFV---VHRSPQPLMSPAWS 187 (415)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSC-SCEE---EEEESSCEEEEEEC
T ss_pred EEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCC-CCEE---EeCCCCcceeeEEc
Confidence 3667777777777765 25667666654 79999999754 2222 23456679999999
Q ss_pred CCCCeEEEEeCCC---eEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEE-EeeCCC--eEE
Q 015438 179 PDQRHLVYASMSP---IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELV-AGSSDD--CIY 252 (407)
Q Consensus 179 p~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg--~i~ 252 (407)
|++++|++++.++ .|++||+.+++...+. .+...+.+++|+|+|+.|+ +++.++ .|+
T Consensus 188 pdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~-----------------~~~~~~~~~~~spdg~~la~~~~~~g~~~i~ 250 (415)
T 2hqs_A 188 PDGSKLAYVTFESGRSALVIQTLANGAVRQVA-----------------SFPRHNGAPAFSPDGSKLAFALSKTGSLNLY 250 (415)
T ss_dssp TTSSEEEEEECTTSSCEEEEEETTTCCEEEEE-----------------CCSSCEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred CCCCEEEEEEecCCCcEEEEEECCCCcEEEee-----------------cCCCcccCEEEcCCCCEEEEEEecCCCceEE
Confidence 9999999998875 9999999988764322 1334789999999999887 566555 499
Q ss_pred EEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeC-CC--cEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCC
Q 015438 253 VYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSD-DN--LCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGR 329 (407)
Q Consensus 253 i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~-d~--~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 329 (407)
+||+.+++. ..+..|...+.+++|+ ++++.|++++. ++ .|.+||+. .++ ...+..+...+..++|+|+|+
T Consensus 251 ~~d~~~~~~-~~l~~~~~~~~~~~~s-pdg~~l~~~s~~~g~~~i~~~d~~----~~~-~~~l~~~~~~~~~~~~spdG~ 323 (415)
T 2hqs_A 251 VMDLASGQI-RQVTDGRSNNTEPTWF-PDSQNLAFTSDQAGRPQVYKVNIN----GGA-PQRITWEGSQNQDADVSSDGK 323 (415)
T ss_dssp EEETTTCCE-EECCCCSSCEEEEEEC-TTSSEEEEEECTTSSCEEEEEETT----SSC-CEECCCSSSEEEEEEECTTSS
T ss_pred EEECCCCCE-EeCcCCCCcccceEEC-CCCCEEEEEECCCCCcEEEEEECC----CCC-EEEEecCCCcccCeEECCCCC
Confidence 999998876 5667788899999998 78888887776 45 67777886 443 344556777889999999999
Q ss_pred EEEEEeCC---CcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCCCC-Cc---ceEEEeCCc--------cc
Q 015438 330 YLISNGKD---QAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPC-DQ---SVATYKGHS--------VL 394 (407)
Q Consensus 330 ~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~---~v~~~~gh~--------~~ 394 (407)
+|++++.+ ..|.+||+.+++... + .... .+..+.|+|+++.|+.+. ++ .|.+|+-.. ..
T Consensus 324 ~l~~~~~~~g~~~i~~~d~~~~~~~~-l----~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~ 397 (415)
T 2hqs_A 324 FMVMVSSNGGQQHIAKQDLATGGVQV-L----SSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATD 397 (415)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEE-C----CCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSS
T ss_pred EEEEEECcCCceEEEEEECCCCCEEE-e----cCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCC
Confidence 99988864 589999999876532 1 1112 678899999998776543 22 466665221 11
Q ss_pred eeeEEEeeCCC
Q 015438 395 RTLIRCHFSPV 405 (407)
Q Consensus 395 ~~~~~~~fsp~ 405 (407)
..+..++|||.
T Consensus 398 ~~v~~~~~~~~ 408 (415)
T 2hqs_A 398 GQVKFPAWSPY 408 (415)
T ss_dssp SEEEEEEECCC
T ss_pred CCCcCCccccc
Confidence 35788899996
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=1e-22 Score=179.90 Aligned_cols=237 Identities=14% Similarity=0.175 Sum_probs=171.2
Q ss_pred CcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCC-CeEEeEeeeccccceEEEEEEECCCCCeEEEEeC--C--C
Q 015438 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVER-GWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM--S--P 191 (407)
Q Consensus 117 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~--d--g 191 (407)
...+..|...|.+++|+|+|++|++++ ++.|++||+.+ +..... ....+...+.+++|+|++++|++++. + .
T Consensus 34 ~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~--~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 110 (297)
T 2ojh_A 34 MRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKV--DTGFATICNNDHGISPDGALYAISDKVEFGKS 110 (297)
T ss_dssp EEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEEC--CCTTCCCBCSCCEECTTSSEEEEEECTTTSSC
T ss_pred eeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEe--ccccccccccceEECCCCCEEEEEEeCCCCcc
Confidence 345567889999999999999999986 78999999988 643322 11222356889999999999999983 3 3
Q ss_pred eEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEE-EeeCCCeEEEEEcCC-CeeeeeeeccC
Q 015438 192 IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELV-AGSSDDCIYVYDLEA-NKLSLRILAHT 269 (407)
Q Consensus 192 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~i~d~~~-~~~~~~~~~~~ 269 (407)
.|.+|++.++....+. ....+..++|+|+++.|+ ++..++.+.+|++.. ......+..+.
T Consensus 111 ~l~~~~~~~~~~~~~~------------------~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 172 (297)
T 2ojh_A 111 AIYLLPSTGGTPRLMT------------------KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGE 172 (297)
T ss_dssp EEEEEETTCCCCEECC------------------SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSS
T ss_pred eEEEEECCCCceEEee------------------cCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCC
Confidence 4555555554422211 111478899999999877 677899899998632 23345566788
Q ss_pred CCeEEEEecCCCCCEEEEEe-CCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCC-----------
Q 015438 270 SDVNTVCFGDESGHLIYSGS-DDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKD----------- 337 (407)
Q Consensus 270 ~~v~~i~~s~~~~~~l~s~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~d----------- 337 (407)
..+.+++|+ +++++|+.++ .++.+++|++.. .+..+..+..|...+..++|+|+|++|++++.+
T Consensus 173 ~~~~~~~~s-~dg~~l~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 248 (297)
T 2ojh_A 173 GRNDGPDYS-PDGRWIYFNSSRTGQMQIWRVRV---DGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLD 248 (297)
T ss_dssp SCEEEEEEC-TTSSEEEEEECTTSSCEEEEEET---TSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEE
T ss_pred CccccceEC-CCCCEEEEEecCCCCccEEEECC---CCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCc
Confidence 899999998 7787776655 589999999862 345566777788889999999999999988865
Q ss_pred CcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCCC
Q 015438 338 QAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHP 380 (407)
Q Consensus 338 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 380 (407)
+.|.+||+.+.+...... ...+...+..+.|+|+++.|+..
T Consensus 249 ~~l~~~d~~~~~~~~~~~--~~~~~~~~~~~~~spdg~~l~~~ 289 (297)
T 2ojh_A 249 VRVQLMDMDGGNVETLFD--LFGGQGTMNSPNWSPDGDEFAYV 289 (297)
T ss_dssp EEEEEEETTSCSCEEEEE--EEESTTTSCSCCBCTTSSEEEEE
T ss_pred eEEEEEecCCCCceeeec--cCCCCcccccceECCCCCEEEEE
Confidence 569999998875432211 11334556778889988766543
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=7.5e-22 Score=189.36 Aligned_cols=280 Identities=12% Similarity=0.077 Sum_probs=196.8
Q ss_pred ceeeeeccCCCCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEc--CCCeEEeEeeeccccceEEEEEEECC----
Q 015438 106 HMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDV--ERGWKIQKDILAKSLRWTVTDTSLSP---- 179 (407)
Q Consensus 106 ~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~--~~~~~~~~~~~~~~~~~~v~~~~~sp---- 179 (407)
..+++....+....+..+.. +.+++|+|+|++|++++.|+.|.+||+ .++..+..+. +...+..++|+|
T Consensus 161 V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~----~g~~p~~va~sp~~~~ 235 (543)
T 1nir_A 161 IALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK----IGIEARSVESSKFKGY 235 (543)
T ss_dssp EEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE----CCSEEEEEEECCSTTC
T ss_pred EEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe----cCCCcceEEeCCCcCC
Confidence 33443333333344442222 899999999999999999999999999 7775554432 233589999999
Q ss_pred CCCeEEEEe-CCCeEEEEECCCCceeccccccccccceeeeecCCCCcc-ccEEEEEEeCCCC-EEEEeeCCCeEEEEEc
Q 015438 180 DQRHLVYAS-MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYS-FGIFSLKFSTDGR-ELVAGSSDDCIYVYDL 256 (407)
Q Consensus 180 ~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~ 256 (407)
++++|++++ .+++|.+||..+++........... . ....-|. ..+..+.++|++. ++++...++.|.+||+
T Consensus 236 dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~----~--~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~ 309 (543)
T 1nir_A 236 EDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMT----V--DTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNY 309 (543)
T ss_dssp TTTEEEEEEEESSEEEEEETTTCCEEEEEECCEEC----S--SSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEEC
T ss_pred CCCEEEEEEccCCeEEEEeccccccceeecccCcc----c--CccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEe
Confidence 999999988 4899999999988776554332100 0 0000011 2688999999776 4566678899999999
Q ss_pred CCCeeee--eeeccCCCeEEEEecCCCCCEEEEE-eCCCcEEEEeCcccCCCCceeeeecc----ccCCeEEEEecCC-C
Q 015438 257 EANKLSL--RILAHTSDVNTVCFGDESGHLIYSG-SDDNLCKVWDRRCLNVKGKPAGVLMG----HLEGITFIDSRGD-G 328 (407)
Q Consensus 257 ~~~~~~~--~~~~~~~~v~~i~~s~~~~~~l~s~-~~d~~i~vwd~~~~~~~~~~~~~~~~----~~~~i~~~~~s~~-~ 328 (407)
.+.+.+. .+ .+...+..+.|+ +++++|+++ ..+++|.+||.. +++++..+.. |.+....+ ++|+ +
T Consensus 310 ~~~~~l~~~~i-~~~~~~~~~~~s-pdg~~l~va~~~~~~v~v~D~~----tg~l~~~i~~g~~ph~g~g~~~-~~p~~g 382 (543)
T 1nir_A 310 KDIDNLTVTSI-GAAPFLHDGGWD-SSHRYFMTAANNSNKVAVIDSK----DRRLSALVDVGKTPHPGRGANF-VHPKYG 382 (543)
T ss_dssp TTSSSCEEEEE-ECCSSCCCEEEC-TTSCEEEEEEGGGTEEEEEETT----TTEEEEEEECSSSBCCTTCEEE-EETTTE
T ss_pred cCCCcceeEEe-ccCcCccCceEC-CCCCEEEEEecCCCeEEEEECC----CCeEEEeeccCCCCCCCCCccc-CCCCCc
Confidence 8876544 34 355678899998 778866555 468999999998 7787777763 54433333 4777 6
Q ss_pred CEEEEEe-CCCcEEEEECCC-------CCCcccccCCCccccccceeeeCCCCCCccCCCC--------CcceEEEeCCc
Q 015438 329 RYLISNG-KDQAIKLWDIRK-------MSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPC--------DQSVATYKGHS 392 (407)
Q Consensus 329 ~~l~s~~-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~~~v~~~~gh~ 392 (407)
..++++. .|++|.+||+.+ .+.+.++ ..+......+.|+|+++.|.+.. +++|.+|+-.+
T Consensus 383 ~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l----~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~ 458 (543)
T 1nir_A 383 PVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAEL----QGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKN 458 (543)
T ss_dssp EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEE----ECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTC
T ss_pred cEEEeccCCCceEEEEEeCCCCCchhcCeEEEEE----EcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCC
Confidence 6677765 689999999998 4444433 22333456789999999988765 67999998653
Q ss_pred c------------------ceeeEEEeeCCCCC
Q 015438 393 V------------------LRTLIRCHFSPVYR 407 (407)
Q Consensus 393 ~------------------~~~~~~~~fsp~~~ 407 (407)
. .+.+..+.|+||++
T Consensus 459 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~ 491 (543)
T 1nir_A 459 LDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGD 491 (543)
T ss_dssp TTSCCEEECHHHHHCCCSSCCEEEEEEECSSSS
T ss_pred CCCCeEEeechhhcccCCCCCceEeccCCCCCC
Confidence 2 24566889999875
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=2.1e-22 Score=193.24 Aligned_cols=249 Identities=13% Similarity=0.085 Sum_probs=181.9
Q ss_pred EECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEEC--CCCceecccc
Q 015438 131 QFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV--GSGTMESLAN 208 (407)
Q Consensus 131 ~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~--~~~~~~~~~~ 208 (407)
+|+|++..+++++.|+.|.+||..+++.+..... ++. +..++|+|++++|++++.++.|.+||+ .+++....+.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~--g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~ 219 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT--GYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK 219 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEEC--STT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEec--Ccc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe
Confidence 3889999999999999999999999876654332 222 789999999999999999999999999 6665433322
Q ss_pred ccccccceeeeecCCCCccccEEEEEEeC----CCCEEEEeeC-CCeEEEEEcCCCeeeeeeec----------cC-CCe
Q 015438 209 VTEIHDGLDFSAADDGGYSFGIFSLKFST----DGRELVAGSS-DDCIYVYDLEANKLSLRILA----------HT-SDV 272 (407)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~----~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~----------~~-~~v 272 (407)
. ...+..++|+| +|+++++++. +++|.+||..+++++..+.. |. ..+
T Consensus 220 ~-----------------g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v 282 (543)
T 1nir_A 220 I-----------------GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRV 282 (543)
T ss_dssp C-----------------CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCE
T ss_pred c-----------------CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCce
Confidence 1 12578999999 9999999884 89999999999998887764 22 368
Q ss_pred EEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceee--eeccccCCeEEEEecCCCCEEEEEe-CCCcEEEEECCCCC
Q 015438 273 NTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAG--VLMGHLEGITFIDSRGDGRYLISNG-KDQAIKLWDIRKMS 349 (407)
Q Consensus 273 ~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~--~~~~~~~~i~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~ 349 (407)
..+.++|..+.++++...++.|.+||.. ..+.+. .+ .+...+..++|+|+|++|++++ .+++|.+||+.+++
T Consensus 283 ~~i~~s~~~~~~~vs~~~~g~i~vvd~~----~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~ 357 (543)
T 1nir_A 283 AAIIASHEHPEFIVNVKETGKVLLVNYK----DIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRR 357 (543)
T ss_dssp EEEEECSSSSEEEEEETTTTEEEEEECT----TSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTE
T ss_pred EEEEECCCCCEEEEEECCCCeEEEEEec----CCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCe
Confidence 8999996667777888889999999997 333322 33 3556688899999999877655 68999999999988
Q ss_pred CcccccCCCcccc-ccceeeeCCCC-CCccCCC--CCcceEEEeCCc----------------cceeeEEEeeCCCCC
Q 015438 350 SNASCNLGFRSYE-WDYRWMDYPPQ-ARDLKHP--CDQSVATYKGHS----------------VLRTLIRCHFSPVYR 407 (407)
Q Consensus 350 ~~~~~~~~~~~~~-~~v~~~~~~~~-~~~l~~~--~~~~v~~~~gh~----------------~~~~~~~~~fsp~~~ 407 (407)
....+..+...+. ..+.+ ++|+ +++++++ .++.|.+|+-.+ .......+.|||+.|
T Consensus 358 l~~~i~~g~~ph~g~g~~~--~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~ 433 (543)
T 1nir_A 358 LSALVDVGKTPHPGRGANF--VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSS 433 (543)
T ss_dssp EEEEEECSSSBCCTTCEEE--EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCC
T ss_pred EEEeeccCCCCCCCCCccc--CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCC
Confidence 7665543222221 11221 3454 6666553 457777776433 012345578899875
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.91 E-value=1.4e-22 Score=202.84 Aligned_cols=258 Identities=11% Similarity=-0.005 Sum_probs=183.1
Q ss_pred CCceEEEEECCCCCEEEEEeC-CC-----eEEEEEcCCCeEEeEeeeccccc----------------------eEEEEE
Q 015438 124 TSRAYVSQFSADGSLFVAGFQ-AS-----QIRIYDVERGWKIQKDILAKSLR----------------------WTVTDT 175 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~-dg-----~i~iwd~~~~~~~~~~~~~~~~~----------------------~~v~~~ 175 (407)
...|.+++|||||++|++++. |+ .|++||+.++...... ....+. ..|.++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLV-DSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEE-CGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEcc-chhhcccccccccchhhhhhhhhhhccccCccee
Confidence 457899999999999999988 88 8999999988544332 222222 347899
Q ss_pred EECCCCCeEEEEeCCCeEEEEECCCC---ceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEE
Q 015438 176 SLSPDQRHLVYASMSPIVHIVDVGSG---TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIY 252 (407)
Q Consensus 176 ~~sp~~~~l~~~~~dg~i~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 252 (407)
+|||||++|++++. +.|++||+.++ ....+. .+...+.+++|+|||++|++++ ++.|+
T Consensus 115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~-----------------~~~~~~~~~~~SPDG~~la~~~-~~~i~ 175 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLT-----------------HGEGFATDAKLSPKGGFVSFIR-GRNLW 175 (741)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCC-----------------CSSSCEEEEEECTTSSEEEEEE-TTEEE
T ss_pred EECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcc-----------------cCCcccccccCCCCCCEEEEEe-CCcEE
Confidence 99999999999886 99999999887 433221 2334689999999999999987 46899
Q ss_pred EEEcCCCeeeeeeeccCCC----------------eEEEEecCCCCCEEEEEeCCC------------------------
Q 015438 253 VYDLEANKLSLRILAHTSD----------------VNTVCFGDESGHLIYSGSDDN------------------------ 292 (407)
Q Consensus 253 i~d~~~~~~~~~~~~~~~~----------------v~~i~~s~~~~~~l~s~~~d~------------------------ 292 (407)
+||+.+++.......+... +..++|+ +++++|++++.|+
T Consensus 176 ~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~S-pDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~ 254 (741)
T 2ecf_A 176 VIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWA-PDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYP 254 (741)
T ss_dssp EEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEEC-TTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECC
T ss_pred EEecCCCCEEEeccCCccceeccccceeeeeccccccceEEC-CCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecC
Confidence 9999988766544433332 4789998 7888888887665
Q ss_pred ---------cEEEEeCcccCCC-Cceeeeec--cccCCeEEEEecCCCCEEEEEeC-----CCcEEEEECCCCCCccccc
Q 015438 293 ---------LCKVWDRRCLNVK-GKPAGVLM--GHLEGITFIDSRGDGRYLISNGK-----DQAIKLWDIRKMSSNASCN 355 (407)
Q Consensus 293 ---------~i~vwd~~~~~~~-~~~~~~~~--~~~~~i~~~~~s~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~ 355 (407)
.|.+||+. . ++...... .|...+..++| |||++|++++. +..|++||+.+++......
T Consensus 255 ~~g~~~~~~~l~~~d~~----~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~ 329 (741)
T 2ecf_A 255 AAGDANVQVKLGVISPA----EQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAH 329 (741)
T ss_dssp BTTSCCCEEEEEEECSS----TTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEE
T ss_pred CCCCCCCeeEEEEEECC----CCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEE
Confidence 78899987 4 44443332 46778999999 99999997764 5679999999877544332
Q ss_pred CCCccccccceeeeCCCCCCccCCC-CCcceEEEeCC--cc-------ceeeEEE-eeCCCCC
Q 015438 356 LGFRSYEWDYRWMDYPPQARDLKHP-CDQSVATYKGH--SV-------LRTLIRC-HFSPVYR 407 (407)
Q Consensus 356 ~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~v~~~~gh--~~-------~~~~~~~-~fsp~~~ 407 (407)
.........+..+.|+|+++++..+ .++.+.+|.-. .. ...+..+ .||||.+
T Consensus 330 ~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~~~~l~~~~~~v~~~~~~s~dg~ 392 (741)
T 2ecf_A 330 ETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGKAAALTHGNWSVDELLAVDEKAG 392 (741)
T ss_dssp EECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSCEEESCCSSSCEEEEEEEETTTT
T ss_pred cCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCCeeeeeecceEEEeEeEEeCCCC
Confidence 1111111145678899999876543 45555555321 10 1124455 5999874
No 133
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=8.9e-23 Score=190.64 Aligned_cols=214 Identities=15% Similarity=0.111 Sum_probs=155.8
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCC----------eEEeE--eeeccccceEEEEEEECCCCCeEE----EE
Q 015438 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERG----------WKIQK--DILAKSLRWTVTDTSLSPDQRHLV----YA 187 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~----------~~~~~--~~~~~~~~~~v~~~~~sp~~~~l~----~~ 187 (407)
...++.+++++++.++++++.++ ++||+.... ..... ......+...|.+++|+|++++|+ ++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 44688999999999999998887 999875321 00100 001112345699999999999999 78
Q ss_pred eCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCC-CCEEEEeeCCCeEEEEEcCCCeeeeeee
Q 015438 188 SMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-GRELVAGSSDDCIYVYDLEANKLSLRIL 266 (407)
Q Consensus 188 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 266 (407)
+.|+.|+|||+.+.......... .........+|...|.+++|+|+ +.+|++++.||+|++||++++..+....
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~-----~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~ 189 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKR-----PFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATL 189 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCC-----CSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEE
T ss_pred CCCceEEEEEccccccCCcCCcc-----eeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeecc
Confidence 88999999998754100000000 00001122357889999999998 7899999999999999999987776777
Q ss_pred ccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccc-------cCCeEEEEecCCCCEEEEEe-CCC
Q 015438 267 AHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGH-------LEGITFIDSRGDGRYLISNG-KDQ 338 (407)
Q Consensus 267 ~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~-------~~~i~~~~~s~~~~~l~s~~-~dg 338 (407)
.|...|.+++|+ +++++|++|+.||.|++||++ ++....+..| ...|.+++|++++.++++.+ .||
T Consensus 190 ~~~~~v~~v~ws-pdg~~lasgs~dg~v~iwd~~-----~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg 263 (434)
T 2oit_A 190 PSTVAVTSVCWS-PKGKQLAVGKQNGTVVQYLPT-----LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADG 263 (434)
T ss_dssp CGGGCEEEEEEC-TTSSCEEEEETTSCEEEECTT-----CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTC
T ss_pred CCCCceeEEEEc-CCCCEEEEEcCCCcEEEEccC-----CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCC
Confidence 889999999998 779999999999999999996 2333333322 33799999999888876543 443
Q ss_pred ------cEEEEECCCCC
Q 015438 339 ------AIKLWDIRKMS 349 (407)
Q Consensus 339 ------~i~iwd~~~~~ 349 (407)
.+++|++++.+
T Consensus 264 ~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 264 TLETSPDVVMALLPKKE 280 (434)
T ss_dssp CSSSCCEEEEEECCCTT
T ss_pred ccCCCCceEEEEeccCC
Confidence 39999998764
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.90 E-value=4.5e-21 Score=174.25 Aligned_cols=263 Identities=11% Similarity=0.020 Sum_probs=192.5
Q ss_pred CCCceEEEEECCCCCEEEEEeC-------CCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEE-eCCCeEE
Q 015438 123 TTSRAYVSQFSADGSLFVAGFQ-------ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVH 194 (407)
Q Consensus 123 h~~~v~~~~~s~~~~~l~~~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~dg~i~ 194 (407)
....+..++|+|+|+++++++. ++.|.+||..+++........ ..+..++|+|++++++++ ..++.|.
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~v~~~~~~~v~ 114 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND----LKPFGATINNTTQTLWFGNTVNSAVT 114 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES----SCCCSEEEETTTTEEEEEETTTTEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC----CCcceEEECCCCCEEEEEecCCCEEE
Confidence 3456889999999999888774 568999999988665544332 236778999999966554 5579999
Q ss_pred EEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEee--CCCeEEEEEcCCCeeeeeeeccCCCe
Q 015438 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS--SDDCIYVYDLEANKLSLRILAHTSDV 272 (407)
Q Consensus 195 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v 272 (407)
+||..+++............ ........+.++.|+|+++++++++ .++.|.+||+.+++.+..+..+...+
T Consensus 115 ~~d~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 187 (353)
T 3vgz_A 115 AIDAKTGEVKGRLVLDDRKR-------TEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMS 187 (353)
T ss_dssp EEETTTCCEEEEEESCCCCC-------CSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTC
T ss_pred EEeCCCCeeEEEEecCCCcc-------ccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCcc
Confidence 99999887654433211100 0001112368899999999877776 47899999999999888876566668
Q ss_pred EEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeecc----ccCCeEEEEecCCCCEEEEEeC-CCcEEEEECCC
Q 015438 273 NTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMG----HLEGITFIDSRGDGRYLISNGK-DQAIKLWDIRK 347 (407)
Q Consensus 273 ~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~----~~~~i~~~~~s~~~~~l~s~~~-dg~i~iwd~~~ 347 (407)
..++|+ ++++.+++++.++.|.+||+. .++.+..+.. +...+..++|+|+|++|++++. ++.|.+||+.+
T Consensus 188 ~~~~~s-~dg~~l~~~~~~~~i~~~d~~----~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 262 (353)
T 3vgz_A 188 TGLALD-SEGKRLYTTNADGELITIDTA----DNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRN 262 (353)
T ss_dssp CCCEEE-TTTTEEEEECTTSEEEEEETT----TTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTT
T ss_pred ceEEEC-CCCCEEEEEcCCCeEEEEECC----CCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 899998 788889999999999999998 6776666553 4556888999999998777665 59999999998
Q ss_pred CCCcccccCCCccccccceeeeCCCCCCccC-C-CCCcceEEEeCCcc--------ceeeEEEeeCCCCC
Q 015438 348 MSSNASCNLGFRSYEWDYRWMDYPPQARDLK-H-PCDQSVATYKGHSV--------LRTLIRCHFSPVYR 407 (407)
Q Consensus 348 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~-~~~~~v~~~~gh~~--------~~~~~~~~fsp~~~ 407 (407)
++....+.... ...+.|+|+++.+. . ..++.|.+|+..+. ......+.|+||.+
T Consensus 263 ~~~~~~~~~~~------~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~ 326 (353)
T 3vgz_A 263 GNILAKVAAPE------SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGK 326 (353)
T ss_dssp CCEEEEEECSS------CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSC
T ss_pred CcEEEEEEcCC------CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCC
Confidence 87765543211 24588899997443 3 35788888886532 12346678999875
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=2.8e-21 Score=174.77 Aligned_cols=251 Identities=15% Similarity=0.137 Sum_probs=165.8
Q ss_pred cCCCceEEEEECCCCCEEEEEeCC-CeEEEEEcC--CCeEEeEeeeccccceEEEEEEECCCCCeEEEEeC-CCeEEEEE
Q 015438 122 QTTSRAYVSQFSADGSLFVAGFQA-SQIRIYDVE--RGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM-SPIVHIVD 197 (407)
Q Consensus 122 ~h~~~v~~~~~s~~~~~l~~~~~d-g~i~iwd~~--~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-dg~i~vwd 197 (407)
.|...+.+++|+|+|++|++++.+ +.|.+|+++ ++.... ......+. .+..++|+|++++|++++. ++.|.+||
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d 112 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTF-AAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTR 112 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE-EEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceee-ccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEE
Confidence 467788999999999999988886 899999997 443221 11111122 5888999999998877664 88999999
Q ss_pred CCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEee-CCCeEEEEEcCC-Ceeee----eeec-cCC
Q 015438 198 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-SDDCIYVYDLEA-NKLSL----RILA-HTS 270 (407)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~-~~~~~----~~~~-~~~ 270 (407)
+..+.......... ....+.+++|+|++++|++++ .++.|++||+.+ ++... .+.. ...
T Consensus 113 ~~~~~~~~~~~~~~--------------~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 178 (343)
T 1ri6_A 113 LEDGLPVGVVDVVE--------------GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGA 178 (343)
T ss_dssp EETTEEEEEEEEEC--------------CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTC
T ss_pred CCCCcccccccccc--------------CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCC
Confidence 95332111111110 112477899999999888877 889999999987 54432 2222 345
Q ss_pred CeEEEEecCCCCCEEE-EEeCCCcEEEEeCcccCCCCceeeeec----cc--cCCeEEEEecCCCCEEEEE-eCCCcEEE
Q 015438 271 DVNTVCFGDESGHLIY-SGSDDNLCKVWDRRCLNVKGKPAGVLM----GH--LEGITFIDSRGDGRYLISN-GKDQAIKL 342 (407)
Q Consensus 271 ~v~~i~~s~~~~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~~~~----~~--~~~i~~~~~s~~~~~l~s~-~~dg~i~i 342 (407)
.+..++|+ +++++++ ++..++.|.+||+.............. ++ ...+..++|+|+|++|+++ ..++.|.+
T Consensus 179 ~~~~~~~~-pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v 257 (343)
T 1ri6_A 179 GPRHMVFH-PNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITV 257 (343)
T ss_dssp CEEEEEEC-TTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CcceEEEC-CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEE
Confidence 78899998 6777655 445889999999952111111122222 11 2356789999999988754 47999999
Q ss_pred EECCCCCCcccccCCCccccccceeeeCCCCCCccCCC--CCcceEEEeC
Q 015438 343 WDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHP--CDQSVATYKG 390 (407)
Q Consensus 343 wd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~v~~~~g 390 (407)
||+............... ...+..++|+|+++.|.++ .++.+.+|+-
T Consensus 258 ~d~~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~ 306 (343)
T 1ri6_A 258 FSVSEDGSVLSKEGFQPT-ETQPRGFNVDHSGKYLIAAGQKSHHISVYEI 306 (343)
T ss_dssp EEECTTSCCEEEEEEEEC-SSSCCCEEECTTSSEEEEECTTTCEEEEEEE
T ss_pred EEEcCCCCceEEeeeecC-CCccceEEECCCCCEEEEecCCCCeEEEEEE
Confidence 999832111111100111 1237788999999865544 4688999943
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.89 E-value=4.9e-23 Score=205.52 Aligned_cols=230 Identities=10% Similarity=0.047 Sum_probs=164.9
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccce---EEEEEEECCCCCeEEEEeCC---------CeE
Q 015438 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRW---TVTDTSLSPDQRHLVYASMS---------PIV 193 (407)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~---~v~~~~~sp~~~~l~~~~~d---------g~i 193 (407)
.+.+++|+|||+++++ +.||.|++||+.++...... ..+.. .|.+++|||||++|++++.+ +.+
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~---~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i 93 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLI---EGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYY 93 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEE---CTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEe---ccccccccccceEEECCCCCEEEEEecCccceeecceeeE
Confidence 4677899999997766 68999999999988544322 22322 38899999999999998764 788
Q ss_pred EEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCe-
Q 015438 194 HIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDV- 272 (407)
Q Consensus 194 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v- 272 (407)
.+||+.+++...+... .++...+..++|+|||+.|++++. +.|++||+.+++.......+...+
T Consensus 94 ~~~d~~~~~~~~l~~~--------------~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~ 158 (723)
T 1xfd_A 94 VLSKIPHGDPQSLDPP--------------EVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVI 158 (723)
T ss_dssp EEEESSSCCCEECCCT--------------TCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTE
T ss_pred EEEECCCCceEeccCC--------------ccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCce
Confidence 9999998875322211 123335778999999999999886 789999999887765554444333
Q ss_pred -----------------EEEEecCCCCCEEEEEeCCC----------------------------------cEEEEeCcc
Q 015438 273 -----------------NTVCFGDESGHLIYSGSDDN----------------------------------LCKVWDRRC 301 (407)
Q Consensus 273 -----------------~~i~~s~~~~~~l~s~~~d~----------------------------------~i~vwd~~~ 301 (407)
.+++|+ ++|+.|++++.|+ .|++||+.
T Consensus 159 ~~g~~~~v~~ee~~~~~~~~~~S-pDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~- 236 (723)
T 1xfd_A 159 YNGLSDWLYEEEILKTHIAHWWS-PDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLN- 236 (723)
T ss_dssp EEEECCHHHHHTTSSSSEEEEEC-TTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESS-
T ss_pred ECcccceeEEEEeccCcceEEEC-CCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECC-
Confidence 789998 8898888887543 79999997
Q ss_pred cCCCCceeeeeccc------cCCeEEEEecCCCCEEEEEeC----CCcEEEEECCCCCCcccccCCCcccccc-ceeeeC
Q 015438 302 LNVKGKPAGVLMGH------LEGITFIDSRGDGRYLISNGK----DQAIKLWDIRKMSSNASCNLGFRSYEWD-YRWMDY 370 (407)
Q Consensus 302 ~~~~~~~~~~~~~~------~~~i~~~~~s~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~-v~~~~~ 370 (407)
.++....+..+ ...+..++|+|||++|++.+. +..|++||+.+++............... ...+.|
T Consensus 237 ---~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~ 313 (723)
T 1xfd_A 237 ---GPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVF 313 (723)
T ss_dssp ---SSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEE
T ss_pred ---CCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceE
Confidence 55544455443 567899999999998877653 3579999999876543321111111111 136789
Q ss_pred CCCCCccCC
Q 015438 371 PPQARDLKH 379 (407)
Q Consensus 371 ~~~~~~l~~ 379 (407)
+|+|+.|+.
T Consensus 314 spdg~~l~~ 322 (723)
T 1xfd_A 314 SKDGRKFFF 322 (723)
T ss_dssp CTTSCSEEE
T ss_pred cCCCCeEEE
Confidence 999986653
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.89 E-value=8.1e-22 Score=196.71 Aligned_cols=290 Identities=13% Similarity=0.101 Sum_probs=188.6
Q ss_pred cceeeeeccCCCCcccccCCC---ceEEEEECCCCCEEEEEeCC---------CeEEEEEcCCCeEEeEeeeccccceEE
Q 015438 105 CHMLSRYLPVNGPWPVDQTTS---RAYVSQFSADGSLFVAGFQA---------SQIRIYDVERGWKIQKDILAKSLRWTV 172 (407)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~h~~---~v~~~~~s~~~~~l~~~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~v 172 (407)
...+|+....+....+..|.. .|.+++|||||++|++++.+ +.|.+||+.++.. ..+.....+...+
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~ 116 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKL 116 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCC
T ss_pred CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccc
Confidence 344555544454555566654 49999999999999999764 7888999998754 2222333444458
Q ss_pred EEEEECCCCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCC----CCccccEEEEEEeCCCCEEEEeeCC
Q 015438 173 TDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADD----GGYSFGIFSLKFSTDGRELVAGSSD 248 (407)
Q Consensus 173 ~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~~~~d 248 (407)
..++|||||+.|++++. +.|++||+.+++...+..... ....+..... +.-...+.+++|+|||+.|++++.+
T Consensus 117 ~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~--~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~ 193 (723)
T 1xfd_A 117 QYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGK--EGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIN 193 (723)
T ss_dssp SBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCB--TTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEE
T ss_pred cccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCC--CCceECcccceeEEEEeccCcceEEECCCCCEEEEEEEC
Confidence 88999999999999886 799999999876544332110 0000000000 0000134789999999999988754
Q ss_pred C----------------------------------eEEEEEcCCCeeeeeeecc------CCCeEEEEecCCCCCEEEEE
Q 015438 249 D----------------------------------CIYVYDLEANKLSLRILAH------TSDVNTVCFGDESGHLIYSG 288 (407)
Q Consensus 249 g----------------------------------~i~i~d~~~~~~~~~~~~~------~~~v~~i~~s~~~~~~l~s~ 288 (407)
+ .|++||+.+++....+..+ ...+..++|+ ++++++++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~S-pDg~~l~~~ 272 (723)
T 1xfd_A 194 DSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWA-TSTKVAVTW 272 (723)
T ss_dssp CTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEES-SSSEEEEEE
T ss_pred CCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEe-CCCeEEEEE
Confidence 3 7999999988865566543 5678999999 788888766
Q ss_pred eC----CCcEEEEeCcccCCCCceeeeeccc-cCCe----EEEEecCCCCEEEE--EeCCC------cEEEEEC-CCCCC
Q 015438 289 SD----DNLCKVWDRRCLNVKGKPAGVLMGH-LEGI----TFIDSRGDGRYLIS--NGKDQ------AIKLWDI-RKMSS 350 (407)
Q Consensus 289 ~~----d~~i~vwd~~~~~~~~~~~~~~~~~-~~~i----~~~~~s~~~~~l~s--~~~dg------~i~iwd~-~~~~~ 350 (407)
+. +..|++||+. .++....+..+ ...+ ..++|+|||+.|+. +..++ .|.+||+ .....
T Consensus 273 ~~~~~~~~~i~~~d~~----~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 348 (723)
T 1xfd_A 273 LNRAQNVSILTLCDAT----TGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSN 348 (723)
T ss_dssp EETTSCEEEEEEEETT----TCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSS
T ss_pred EcCCCCeEEEEEEeCC----CCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCc
Confidence 43 3579999997 66665555433 3333 37899999997775 44667 4667773 33331
Q ss_pred --cccccCCCcccccccee-eeCCCCCCccCC-CCC---cceEEEeCCcc--------------ceeeEEEeeCCCCC
Q 015438 351 --NASCNLGFRSYEWDYRW-MDYPPQARDLKH-PCD---QSVATYKGHSV--------------LRTLIRCHFSPVYR 407 (407)
Q Consensus 351 --~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~-~~~---~~v~~~~gh~~--------------~~~~~~~~fsp~~~ 407 (407)
...+ ....+.+.. +.|+|+++.|.. +.+ ..+.+|.-... ...+..+.||||++
T Consensus 349 ~~~~~l----~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~ 422 (723)
T 1xfd_A 349 DNIQSI----TSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMD 422 (723)
T ss_dssp CCCCBS----CCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSS
T ss_pred cceeEe----ecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCC
Confidence 2222 223444544 689999987753 333 56777763210 11255689999875
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.89 E-value=6.6e-21 Score=171.70 Aligned_cols=248 Identities=9% Similarity=0.043 Sum_probs=170.6
Q ss_pred cccccCCCceEEEEECCCCCEEEEEeC-CCeEEEEEcCCCeE-EeEeeeccccceEEEEEEECCCCCeEEEEeCCC---e
Q 015438 118 WPVDQTTSRAYVSQFSADGSLFVAGFQ-ASQIRIYDVERGWK-IQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP---I 192 (407)
Q Consensus 118 ~~~~~h~~~v~~~~~s~~~~~l~~~~~-dg~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg---~ 192 (407)
..+..+...+ +++|+|+|+++++++. ++.|.+||+.++.. .... ..+..+..+++|+|++++|+++..++ .
T Consensus 34 ~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~---~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 109 (331)
T 3u4y_A 34 NQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI---QEGQSSMADVDITPDDQFAVTVTGLNHPFN 109 (331)
T ss_dssp EEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE---EECSSCCCCEEECTTSSEEEECCCSSSSCE
T ss_pred eeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec---ccCCCCccceEECCCCCEEEEecCCCCccc
Confidence 3344445666 9999999997776665 88999999988754 3222 22333344499999999999655553 8
Q ss_pred EEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEe-eCCCe-EEEEEcCCCeee----eeee
Q 015438 193 VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG-SSDDC-IYVYDLEANKLS----LRIL 266 (407)
Q Consensus 193 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~-i~i~d~~~~~~~----~~~~ 266 (407)
|.+||+.+++....... .....+++|+|+|++++++ ..++. |.+|++.....+ ....
T Consensus 110 i~v~d~~~~~~~~~~~~-----------------~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~ 172 (331)
T 3u4y_A 110 MQSYSFLKNKFISTIPI-----------------PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFI 172 (331)
T ss_dssp EEEEETTTTEEEEEEEC-----------------CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEE
T ss_pred EEEEECCCCCeEEEEEC-----------------CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccc
Confidence 99999998876443321 1146899999999865554 55577 999998754332 1222
Q ss_pred ccCCCeEEEEecCCCCCEE-EEEeCCCcEEEEeCcccCCCCce---eeeeccccCCeEEEEecCCCCEEEEEe-CCCcEE
Q 015438 267 AHTSDVNTVCFGDESGHLI-YSGSDDNLCKVWDRRCLNVKGKP---AGVLMGHLEGITFIDSRGDGRYLISNG-KDQAIK 341 (407)
Q Consensus 267 ~~~~~v~~i~~s~~~~~~l-~s~~~d~~i~vwd~~~~~~~~~~---~~~~~~~~~~i~~~~~s~~~~~l~s~~-~dg~i~ 341 (407)
.....+..++|+ ++++++ +++..++.|.+||+. .++. +..+.. ...+..++|+|+|++|++++ .++.|.
T Consensus 173 ~~~~~~~~~~~s-pdg~~l~v~~~~~~~v~v~d~~----~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~ 246 (331)
T 3u4y_A 173 SGGTRPFNITFT-PDGNFAFVANLIGNSIGILETQ----NPENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVF 246 (331)
T ss_dssp CSSSSEEEEEEC-TTSSEEEEEETTTTEEEEEECS----STTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEE
T ss_pred cCCCCccceEEC-CCCCEEEEEeCCCCeEEEEECC----CCcccceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEE
Confidence 344568999998 777754 555578999999997 5665 666653 35678999999999776655 578899
Q ss_pred EEECCCCCC--cccccCC---CccccccceeeeCCCCCCccC--CCCCcceEEEeCCc
Q 015438 342 LWDIRKMSS--NASCNLG---FRSYEWDYRWMDYPPQARDLK--HPCDQSVATYKGHS 392 (407)
Q Consensus 342 iwd~~~~~~--~~~~~~~---~~~~~~~v~~~~~~~~~~~l~--~~~~~~v~~~~gh~ 392 (407)
+||+.+++. +..+... ..........++|+|+++.|. ...++.|.+|+-..
T Consensus 247 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 247 NFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp EEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred EEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 999998765 2211111 112222235689999998664 34567899998554
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.88 E-value=1.7e-21 Score=194.87 Aligned_cols=264 Identities=11% Similarity=0.049 Sum_probs=180.5
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCCe--EEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCce
Q 015438 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGW--KIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM 203 (407)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~ 203 (407)
.|.+++|||||++|++++. +.|++||+.++. ... ....+...+..++|||||++|++++. +.|++||+.+++.
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~---~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~ 184 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVR---QLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQ 184 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCC---BCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEE---EcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCE
Confidence 4889999999999999886 999999998762 222 23344557999999999999999874 6899999998765
Q ss_pred eccccccccccceeeeecCC---CCccccEEEEEEeCCCCEEEEeeCCC-------------------------------
Q 015438 204 ESLANVTEIHDGLDFSAADD---GGYSFGIFSLKFSTDGRELVAGSSDD------------------------------- 249 (407)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~~~dg------------------------------- 249 (407)
..+...... .+ +..... ......+..+.|+|||++|++++.|+
T Consensus 185 ~~~~~~~~~--~~-~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~ 261 (741)
T 2ecf_A 185 MQLTADGST--TI-GNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANV 261 (741)
T ss_dssp EECCCCCCS--SE-EESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCC
T ss_pred EEeccCCcc--ce-eccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCC
Confidence 443221100 00 000000 00001246799999999999987765
Q ss_pred --eEEEEEcCC-Ceeeeeee--ccCCCeEEEEecCCCCCEEEEEeC-----CCcEEEEeCcccCCCCceeeeeccccC--
Q 015438 250 --CIYVYDLEA-NKLSLRIL--AHTSDVNTVCFGDESGHLIYSGSD-----DNLCKVWDRRCLNVKGKPAGVLMGHLE-- 317 (407)
Q Consensus 250 --~i~i~d~~~-~~~~~~~~--~~~~~v~~i~~s~~~~~~l~s~~~-----d~~i~vwd~~~~~~~~~~~~~~~~~~~-- 317 (407)
.|++||+.+ ++...... .|...+..++| ++++.|++++. +..|++||+. +++....+..+..
T Consensus 262 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--pDg~~l~~~~~~~~~~~~~i~~~d~~----~g~~~~~~~~~~~~~ 335 (741)
T 2ecf_A 262 QVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW--RDPQHLSFQRQSRDQKKLDLVEVTLA----SNQQRVLAHETSPTW 335 (741)
T ss_dssp EEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE--EETTEEEEEEEETTSSEEEEEEEETT----TCCEEEEEEEECSSC
T ss_pred eeEEEEEECCCCCceEEecCCCCcceEEEEEEe--CCCCEEEEEEecccCCeEEEEEEECC----CCceEEEEEcCCCCc
Confidence 899999988 77544332 36678999999 56777776543 5689999997 6666666655543
Q ss_pred --CeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccceee-eCCCCCCccC-CCC-Cc--ceEEEeC
Q 015438 318 --GITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWM-DYPPQARDLK-HPC-DQ--SVATYKG 390 (407)
Q Consensus 318 --~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~-~~~-~~--~v~~~~g 390 (407)
.+..++|+|||+++++++.||.++||.++....... ...+.+.+..+ .|+|+++.+. .+. ++ .+++|.-
T Consensus 336 ~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~~~~----l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~ 411 (741)
T 2ecf_A 336 VPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGKAAA----LTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAV 411 (741)
T ss_dssp CCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSCEEE----SCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEE
T ss_pred CCcCCceEECCCCeEEEEecCCCccEEEEEcCCCCeee----eeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEE
Confidence 456889999999999999999888888763222222 33446667666 5999997553 333 33 6777753
Q ss_pred Cc--c-------ceeeEEEeeCCCCC
Q 015438 391 HS--V-------LRTLIRCHFSPVYR 407 (407)
Q Consensus 391 h~--~-------~~~~~~~~fsp~~~ 407 (407)
.. . ...+..+.||||++
T Consensus 412 ~~~g~~~~~l~~~~~~~~~~~spdg~ 437 (741)
T 2ecf_A 412 PLQGGQPQRLSKAPGMHSASFARNAS 437 (741)
T ss_dssp ETTCCCCEECCCSCSEEEEEECTTSS
T ss_pred EcCCCCeeecccCCCceEEEECCCCC
Confidence 21 1 12356789999975
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.87 E-value=8.3e-21 Score=167.60 Aligned_cols=236 Identities=14% Similarity=0.101 Sum_probs=165.6
Q ss_pred EeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCC-Cceeccccccccccceeeee
Q 015438 142 GFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGS-GTMESLANVTEIHDGLDFSA 220 (407)
Q Consensus 142 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~ 220 (407)
++.++.|++||+.++.... ...|...|.+++|+|++++|++++ ++.|++||+.+ ++.......
T Consensus 18 ~~~~~~i~~~d~~~~~~~~----~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~----------- 81 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRV----VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTG----------- 81 (297)
T ss_dssp CCCCEEEEEEETTTTEEEE----EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCT-----------
T ss_pred CCcceeEEEEeCCCCceee----eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccc-----------
Confidence 4568899999999875432 223456799999999999999986 78999999988 665433211
Q ss_pred cCCCCccccEEEEEEeCCCCEEEEeeC--C--CeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEE-EEeCCCcEE
Q 015438 221 ADDGGYSFGIFSLKFSTDGRELVAGSS--D--DCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIY-SGSDDNLCK 295 (407)
Q Consensus 221 ~~~~~~~~~v~~~~~s~~~~~l~~~~~--d--g~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~-s~~~d~~i~ 295 (407)
.+...+.+++|+|++++|++++. + ..|+.+++.+++. ..+..+ ..+..++|+ ++++.|+ +++.++.++
T Consensus 82 ----~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~-~~~~~~~~s-pdg~~l~~~~~~~~~~~ 154 (297)
T 2ojh_A 82 ----FATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTP-RLMTKN-LPSYWHGWS-PDGKSFTYCGIRDQVFD 154 (297)
T ss_dssp ----TCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCC-EECCSS-SSEEEEEEC-TTSSEEEEEEEETTEEE
T ss_pred ----cccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCce-EEeecC-CCccceEEC-CCCCEEEEEECCCCceE
Confidence 11236788999999999999883 2 4555566665553 444333 458999998 6777665 788899999
Q ss_pred EEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEe-CCCcEEEEECCC-CCCcccccCCCccccccceeeeCCCC
Q 015438 296 VWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNG-KDQAIKLWDIRK-MSSNASCNLGFRSYEWDYRWMDYPPQ 373 (407)
Q Consensus 296 vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~-~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~ 373 (407)
+|+++. .......+..+...+.+++|+|+|++|+.++ .++.+++|+++. ...... ...+...+..+.|+|+
T Consensus 155 l~~~~~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~~~~s~d 227 (297)
T 2ojh_A 155 IYSMDI---DSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVER----ITDSAYGDWFPHPSPS 227 (297)
T ss_dssp EEEEET---TTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEE----CCCCSEEEEEEEECTT
T ss_pred EEEEEC---CCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEE----EecCCcccCCeEECCC
Confidence 999752 2344556667888899999999999888766 589999999873 333322 2233456778899999
Q ss_pred CCccCCCCC------------cceEEEeCCccc-----------eeeEEEeeCCCCC
Q 015438 374 ARDLKHPCD------------QSVATYKGHSVL-----------RTLIRCHFSPVYR 407 (407)
Q Consensus 374 ~~~l~~~~~------------~~v~~~~gh~~~-----------~~~~~~~fsp~~~ 407 (407)
++.|+.... ..|.+|+-.+.. ..+..+.|+|+.+
T Consensus 228 g~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 284 (297)
T 2ojh_A 228 GDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGD 284 (297)
T ss_dssp SSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSS
T ss_pred CCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCC
Confidence 987765432 457777643311 1234468888864
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.87 E-value=1.2e-19 Score=163.45 Aligned_cols=232 Identities=12% Similarity=0.069 Sum_probs=161.6
Q ss_pred EECCCCCE-EEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeC-CCeEEEEECCCCce-eccc
Q 015438 131 QFSADGSL-FVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM-SPIVHIVDVGSGTM-ESLA 207 (407)
Q Consensus 131 ~~s~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-dg~i~vwd~~~~~~-~~~~ 207 (407)
.|.+++.+ +++++.++.|.+||+.+++....... +...+ .++|+|+++++++++. ++.|.+||+.+++. ....
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~ 79 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITL---GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI 79 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEEC---CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEc---cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec
Confidence 45666555 66777899999999998866544332 23346 9999999997777665 88999999988765 2221
Q ss_pred cccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCC---eEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCC-
Q 015438 208 NVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD---CIYVYDLEANKLSLRILAHTSDVNTVCFGDESGH- 283 (407)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~- 283 (407)
.. +.....+++|+|+|++|+++..++ .|.+||+.+++.+..+.. .....+++|+ ++++
T Consensus 80 ~~----------------~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s-pdg~~ 141 (331)
T 3u4y_A 80 QE----------------GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAIS-PNGNG 141 (331)
T ss_dssp EE----------------CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEEC-TTSSC
T ss_pred cc----------------CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEEC-CCCCE
Confidence 11 112333489999999998665553 899999999998877754 4456899998 6665
Q ss_pred EEEEEeCCCc-EEEEeCcccCCCCcee---eeeccccCCeEEEEecCCCCEEEEEe-CCCcEEEEECCCCCC---ccccc
Q 015438 284 LIYSGSDDNL-CKVWDRRCLNVKGKPA---GVLMGHLEGITFIDSRGDGRYLISNG-KDQAIKLWDIRKMSS---NASCN 355 (407)
Q Consensus 284 ~l~s~~~d~~-i~vwd~~~~~~~~~~~---~~~~~~~~~i~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~---~~~~~ 355 (407)
+++++..++. |.+|++.. .+... .........+..++|+|+|++|+.++ .++.|.+||+.+++. ...+.
T Consensus 142 l~~~~~~~~~~i~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~ 218 (331)
T 3u4y_A 142 LILIDRSSANTVRRFKIDA---DGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG 218 (331)
T ss_dssp EEEEEETTTTEEEEEEECT---TCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE
T ss_pred EEEEecCCCceEEEEEECC---CCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc
Confidence 5556666688 99999872 12211 11123345689999999999765554 689999999998876 43332
Q ss_pred CCCccccccceeeeCCCCCCccCC--CCCcceEEEeCCc
Q 015438 356 LGFRSYEWDYRWMDYPPQARDLKH--PCDQSVATYKGHS 392 (407)
Q Consensus 356 ~~~~~~~~~v~~~~~~~~~~~l~~--~~~~~v~~~~gh~ 392 (407)
....+..++|+|+++.+.+ ..++.|.+|+..+
T Consensus 219 -----~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~ 252 (331)
T 3u4y_A 219 -----TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS 252 (331)
T ss_dssp -----CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTT
T ss_pred -----CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCC
Confidence 2245577899999995543 3467788888654
No 142
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.87 E-value=5.1e-20 Score=167.17 Aligned_cols=260 Identities=13% Similarity=0.108 Sum_probs=165.7
Q ss_pred cCCCceEEEEECCCCCEEEEEeC---CCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEe-CCCeEEEEE
Q 015438 122 QTTSRAYVSQFSADGSLFVAGFQ---ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS-MSPIVHIVD 197 (407)
Q Consensus 122 ~h~~~v~~~~~s~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~dg~i~vwd 197 (407)
.+...+..++|+|+|+ |++++. ++.|.+|++.++.. ........+...+..++|+|++++|++++ .++.|.+|+
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~-~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTA-HKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEE-EEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcE-EEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 3456778899999999 555544 68999999977642 22222223344578899999999988887 779999999
Q ss_pred CCC-CceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcC-CCeeee--eeecc-CCCe
Q 015438 198 VGS-GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE-ANKLSL--RILAH-TSDV 272 (407)
Q Consensus 198 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~-~~~~~~--~~~~~-~~~v 272 (407)
+.. +.............+. . .......+.+++|+|+|+++++...++.|++||+. +++... .+..+ ...+
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p----~-~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p 189 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGP----R-PEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGP 189 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCS----S-TTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCE
T ss_pred eCCCCCeeecceeecCCCCC----C-ccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCC
Confidence 963 3322221111000000 0 00122358899999999966666678899999998 454322 22222 3367
Q ss_pred EEEEecCCCCCEEEE-EeCCCcEEEEeCcccCCCCceeeeecccc------CCeEEEEecCCCCEEE-EEeCCCcEEEEE
Q 015438 273 NTVCFGDESGHLIYS-GSDDNLCKVWDRRCLNVKGKPAGVLMGHL------EGITFIDSRGDGRYLI-SNGKDQAIKLWD 344 (407)
Q Consensus 273 ~~i~~s~~~~~~l~s-~~~d~~i~vwd~~~~~~~~~~~~~~~~~~------~~i~~~~~s~~~~~l~-s~~~dg~i~iwd 344 (407)
..++|+ ++++++++ +..++.|.+|++.........+..+.... ..+..++|+|||++|+ ++..++.|.+||
T Consensus 190 ~~~~~s-pdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~ 268 (347)
T 3hfq_A 190 RHLVFS-PDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFA 268 (347)
T ss_dssp EEEEEC-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEE
T ss_pred ceEEEC-CCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEE
Confidence 889998 77885554 56788999999862111111222332222 3488999999999874 555689999999
Q ss_pred CCCCCCcccccCCCccccccceeeeCCCCCCccCCC--CCcceEEEeC
Q 015438 345 IRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHP--CDQSVATYKG 390 (407)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~v~~~~g 390 (407)
+......... .........+..++|+|+++.|.++ .++.+.+|.-
T Consensus 269 ~~~~g~~~~~-~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~ 315 (347)
T 3hfq_A 269 VTADGHLTLI-QQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYAR 315 (347)
T ss_dssp ECGGGCEEEE-EEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ECCCCcEEEe-EEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEE
Confidence 9742211111 1112223346789999999866554 3578999944
No 143
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=1.3e-20 Score=187.61 Aligned_cols=263 Identities=11% Similarity=0.048 Sum_probs=178.1
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCC----
Q 015438 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGS---- 200 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~---- 200 (407)
..|.+++|||+ ..++.+ .++.|++||+.++..... ..+...+.+++|||||+.|+++ .++.|++||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~l----~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~ 154 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTYL----FDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEG 154 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEEE----ECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEEc----cCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCccccc
Confidence 57999999999 666665 359999999988744322 1233458889999999999995 679999999988
Q ss_pred -Cceecccccccc--ccceeeeecCCCCccccEEEEEEeCCCCEEEEee-------------------------------
Q 015438 201 -GTMESLANVTEI--HDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS------------------------------- 246 (407)
Q Consensus 201 -~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------------------------------- 246 (407)
++...+...... ..+.. ....+...+.++.|+|||++|++++
T Consensus 155 ~g~~~~~~~~~~~~~~~g~~----~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~ 230 (706)
T 2z3z_A 155 MSRAIAVTIDGTETLVYGQA----VHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGT 230 (706)
T ss_dssp CCCCEESCSCCBTTEEESSC----CGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTS
T ss_pred CCCcEEeccCCCCCeEcccc----hhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCC
Confidence 665433221110 00000 0000112357899999999999987
Q ss_pred --CCCeEEEEEcCCCeeeeeee--ccCCCeEEEEecCCCCCEEEEEeCCC-----cEEEEeCcccCCCCceeeeec-c-c
Q 015438 247 --SDDCIYVYDLEANKLSLRIL--AHTSDVNTVCFGDESGHLIYSGSDDN-----LCKVWDRRCLNVKGKPAGVLM-G-H 315 (407)
Q Consensus 247 --~dg~i~i~d~~~~~~~~~~~--~~~~~v~~i~~s~~~~~~l~s~~~d~-----~i~vwd~~~~~~~~~~~~~~~-~-~ 315 (407)
.+..|++||+.+++...... .|...+.+++|+ ++++.|++++.++ .|++||+. +++....+. . +
T Consensus 231 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~~v~~~d~~----~g~~~~~~~~~~~ 305 (706)
T 2z3z_A 231 PSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWS-PDENILYVAEVNRAQNECKVNAYDAE----TGRFVRTLFVETD 305 (706)
T ss_dssp CCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEEC-TTSSEEEEEEECTTSCEEEEEEEETT----TCCEEEEEEEEEC
T ss_pred CCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEE-CCCCEEEEEEeCCCCCeeEEEEEECC----CCceeeEEEEccC
Confidence 44679999999887644332 456779999998 7899888877665 89999997 553333332 1 2
Q ss_pred cC---CeEEEEecC--CCCEEEEEeCCCcEEEEECC-CCCCcccccCCCcccccccee-eeCCCCCCccCC-CC-Cc---
Q 015438 316 LE---GITFIDSRG--DGRYLISNGKDQAIKLWDIR-KMSSNASCNLGFRSYEWDYRW-MDYPPQARDLKH-PC-DQ--- 383 (407)
Q Consensus 316 ~~---~i~~~~~s~--~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~-~~-~~--- 383 (407)
.. .+..++|+| ||++|++++.|+.++||+++ +++.... .....+.+.. +.|+|+++.|.. +. ++
T Consensus 306 ~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~----l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~ 381 (706)
T 2z3z_A 306 KHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQ----VTKGEWEVTNFAGFDPKGTRLYFESTEASPLE 381 (706)
T ss_dssp SSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEE----CCCSSSCEEEEEEECTTSSEEEEEESSSCTTC
T ss_pred CCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEe----cCCCCeEEEeeeEEcCCCCEEEEEecCCCCce
Confidence 21 246789999 99999999999999999887 3333222 2334566665 789999976543 22 22
Q ss_pred -ceEEEeCCc-------cceeeEEEeeCCCCC
Q 015438 384 -SVATYKGHS-------VLRTLIRCHFSPVYR 407 (407)
Q Consensus 384 -~v~~~~gh~-------~~~~~~~~~fsp~~~ 407 (407)
.|..++..+ ....+..+.||||++
T Consensus 382 ~~l~~~d~~~~~~~~l~~~~~~~~~~~spdg~ 413 (706)
T 2z3z_A 382 RHFYCIDIKGGKTKDLTPESGMHRTQLSPDGS 413 (706)
T ss_dssp BEEEEEETTCCCCEESCCSSSEEEEEECTTSS
T ss_pred EEEEEEEcCCCCceeccCCCceEEEEECCCCC
Confidence 445554322 112356789999975
No 144
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.86 E-value=6.8e-20 Score=166.44 Aligned_cols=228 Identities=10% Similarity=0.067 Sum_probs=169.1
Q ss_pred CCceEEEEECCCCCEEEEE-eCCCeEEEEEcCCCeEEeEeeecccc------ceEEEEEEECCCCCeEEEEe--CCCeEE
Q 015438 124 TSRAYVSQFSADGSLFVAG-FQASQIRIYDVERGWKIQKDILAKSL------RWTVTDTSLSPDQRHLVYAS--MSPIVH 194 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~------~~~v~~~~~sp~~~~l~~~~--~dg~i~ 194 (407)
...+..++|+|+|++++++ ..++.|.+||..+++........... ...+.++.|+|+++++++++ .++.|.
T Consensus 88 ~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~ 167 (353)
T 3vgz_A 88 DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIW 167 (353)
T ss_dssp SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEE
T ss_pred CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEE
Confidence 3457789999999966554 55799999999988665543322111 11378899999999888776 478999
Q ss_pred EEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeec----cCC
Q 015438 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA----HTS 270 (407)
Q Consensus 195 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~ 270 (407)
+||+.+++....... +...+.+++|+|+++++++++.++.|.+||+.+++.+..+.. +..
T Consensus 168 ~~d~~~~~~~~~~~~----------------~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 231 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQN----------------TGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEH 231 (353)
T ss_dssp EEETTTTEEEEEECC----------------CCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCC
T ss_pred EEcCCCCceEEEecC----------------CCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCc
Confidence 999998876543321 111366789999999999999999999999999998877654 455
Q ss_pred CeEEEEecCCCCCEEEEEe-CCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEe-CCCcEEEEECCCC
Q 015438 271 DVNTVCFGDESGHLIYSGS-DDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNG-KDQAIKLWDIRKM 348 (407)
Q Consensus 271 ~v~~i~~s~~~~~~l~s~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~ 348 (407)
.+..++|+ ++++.+++++ .++.|.+||+. +++.+..+.... ...++|+|+|+++++++ .++.|.+||+.++
T Consensus 232 ~~~~~~~s-~dg~~l~~~~~~~~~v~~~d~~----~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 232 FFINISLD-TARQRAFITDSKAAEVLVVDTR----NGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp CEEEEEEE-TTTTEEEEEESSSSEEEEEETT----TCCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred ccceEEEC-CCCCEEEEEeCCCCEEEEEECC----CCcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 67889998 6677655555 45999999997 677776665433 25799999999766555 6899999999988
Q ss_pred CCcccccCCCccccccceeeeCCCCCCccCC
Q 015438 349 SSNASCNLGFRSYEWDYRWMDYPPQARDLKH 379 (407)
Q Consensus 349 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 379 (407)
+....+.. ......++|+|+++.+.+
T Consensus 305 ~~~~~~~~-----~~~~~~~~~s~dg~~l~v 330 (353)
T 3vgz_A 305 KVVKTFDT-----PTHPNSLALSADGKTLYV 330 (353)
T ss_dssp EEEEEEEC-----CSEEEEEEECTTSCEEEE
T ss_pred eEEEEEec-----CCCCCeEEEcCCCCEEEE
Confidence 76654422 224578899999985544
No 145
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=2.2e-20 Score=174.41 Aligned_cols=162 Identities=14% Similarity=0.040 Sum_probs=125.5
Q ss_pred cCCCceEEEEECCCCCEEE----EEeCCCeEEEEEcCCC--------eEEeEeeeccccceEEEEEEECCC-CCeEEEEe
Q 015438 122 QTTSRAYVSQFSADGSLFV----AGFQASQIRIYDVERG--------WKIQKDILAKSLRWTVTDTSLSPD-QRHLVYAS 188 (407)
Q Consensus 122 ~h~~~v~~~~~s~~~~~l~----~~~~dg~i~iwd~~~~--------~~~~~~~~~~~~~~~v~~~~~sp~-~~~l~~~~ 188 (407)
.|...|.+++|+|+|++|+ +|+.|+.|+|||+.++ +.+.......+|...|.+++|+|+ +.+|++++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 4567899999999999999 7788999999998654 222333455668889999999998 88999999
Q ss_pred CCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeecc
Q 015438 189 MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH 268 (407)
Q Consensus 189 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 268 (407)
.||.|++||++++...... .+|...|.+++|+|+|++|++|+.||.|++||++ ++....+..|
T Consensus 170 ~Dg~v~iwD~~~~~~~~~~----------------~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~ 232 (434)
T 2oit_A 170 ADGSIAVLQVTETVKVCAT----------------LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCP 232 (434)
T ss_dssp TTSCEEEEEESSSEEEEEE----------------ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCC
T ss_pred CCCeEEEEEcCCCcceeec----------------cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCC
Confidence 9999999999877432111 1356689999999999999999999999999998 5555555433
Q ss_pred C-------CCeEEEEecCCCCCEEEE-EeCCC------cEEEEeCcc
Q 015438 269 T-------SDVNTVCFGDESGHLIYS-GSDDN------LCKVWDRRC 301 (407)
Q Consensus 269 ~-------~~v~~i~~s~~~~~~l~s-~~~d~------~i~vwd~~~ 301 (407)
. ..|.+++|+ +++.++++ ++.|| .+++||++.
T Consensus 233 ~~~~~~~~~~v~~v~w~-~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 233 PFYESDHPVRVLDVLWI-GTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp TTCCTTSCEEEEEEEEE-ETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred cccCCCCceeEEEEEEe-cCceEEEEEccCCCccCCCCceEEEEecc
Confidence 2 378999998 55555543 33443 399999974
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.86 E-value=5.9e-20 Score=190.28 Aligned_cols=196 Identities=15% Similarity=0.077 Sum_probs=162.5
Q ss_pred CCCceEEEEEC-CCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccce-EEEEEEECCCCCeEEEEeCCCeEE-EEECC
Q 015438 123 TTSRAYVSQFS-ADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRW-TVTDTSLSPDQRHLVYASMSPIVH-IVDVG 199 (407)
Q Consensus 123 h~~~v~~~~~s-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~v~~~~~sp~~~~l~~~~~dg~i~-vwd~~ 199 (407)
|...+.+++|+ |+|++|++++ ++.|.+|++.++.... ...+.. .+..++|+ +++.|++++.++.+. +|++.
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~ 367 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK----VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYR 367 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE----CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETT
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE----ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECC
Confidence 34479999999 9999999887 7899999998774322 233444 79999999 999999998888888 99998
Q ss_pred CCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecC
Q 015438 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGD 279 (407)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~ 279 (407)
++....+. ++...+..++|+|+|++|++++.++.|++||+.+++....+..|...+.+++|+
T Consensus 368 ~~~~~~l~-----------------~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~S- 429 (1045)
T 1k32_A 368 TGKAEKFE-----------------ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTIS- 429 (1045)
T ss_dssp TCCEEECC-----------------CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEEC-
T ss_pred CCCceEec-----------------CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEEC-
Confidence 76543222 234478999999999999999999999999999998877777899999999998
Q ss_pred CCCCEEEEEeCCC----------cEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 015438 280 ESGHLIYSGSDDN----------LCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRK 347 (407)
Q Consensus 280 ~~~~~l~s~~~d~----------~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 347 (407)
+++++|++++.++ .|++||+. .++ +..+..|...+..++|+|||++|++++.++...+|+...
T Consensus 430 pDG~~la~~~~~~~~~~~~~~~~~i~l~d~~----~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~ 502 (1045)
T 1k32_A 430 DNSRFIAYGFPLKHGETDGYVMQAIHVYDME----GRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVV 502 (1045)
T ss_dssp TTSCEEEEEEEECSSTTCSCCEEEEEEEETT----TTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSS
T ss_pred CCCCeEEEEecCccccccCCCCCeEEEEECC----CCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhc
Confidence 7899888877644 89999997 555 667778888899999999999999999988888887654
No 147
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.86 E-value=4.9e-20 Score=166.53 Aligned_cols=248 Identities=11% Similarity=0.122 Sum_probs=161.7
Q ss_pred EEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCC-CeEEEEECC--CCceecccccccccc
Q 015438 138 LFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-PIVHIVDVG--SGTMESLANVTEIHD 214 (407)
Q Consensus 138 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-g~i~vwd~~--~~~~~~~~~~~~~~~ 214 (407)
.+++++.++.|++|+++......... ...+...+.+++|+|++++|++++.+ +.|.+|++. ++..........
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--- 82 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQ-VVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL--- 82 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEE-EEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC---
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEee-eEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc---
Confidence 34444779999999996321111111 12244468889999999999988876 999999997 444332211110
Q ss_pred ceeeeecCCCCccccEEEEEEeCCCCEEEEeeC-CCeEEEEEcC---CCeeeeeeeccCCCeEEEEecCCCCCEEEEEe-
Q 015438 215 GLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-DDCIYVYDLE---ANKLSLRILAHTSDVNTVCFGDESGHLIYSGS- 289 (407)
Q Consensus 215 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~i~d~~---~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~- 289 (407)
+ ..+..++|+|++++|++++. ++.|.+||+. +.+.+..+. ....+.+++|+ ++++++++++
T Consensus 83 -----------~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s-~dg~~l~~~~~ 148 (343)
T 1ri6_A 83 -----------P-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANIS-PDNRTLWVPAL 148 (343)
T ss_dssp -----------S-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEEC-TTSSEEEEEEG
T ss_pred -----------C-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEEC-CCCCEEEEecC
Confidence 1 15778999999998876654 8899999994 444444443 34468899998 7787777776
Q ss_pred CCCcEEEEeCcccCCC-Cceee----eecc-ccCCeEEEEecCCCCEEEEEe-CCCcEEEEECCC--CCCc--ccccCCC
Q 015438 290 DDNLCKVWDRRCLNVK-GKPAG----VLMG-HLEGITFIDSRGDGRYLISNG-KDQAIKLWDIRK--MSSN--ASCNLGF 358 (407)
Q Consensus 290 ~d~~i~vwd~~~~~~~-~~~~~----~~~~-~~~~i~~~~~s~~~~~l~s~~-~dg~i~iwd~~~--~~~~--~~~~~~~ 358 (407)
.++.|++||+. . ++... .+.. ....+..++|+|++++|++++ .++.|.+||++. ++.. .......
T Consensus 149 ~~~~v~~~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~ 224 (343)
T 1ri6_A 149 KQDRICLFTVS----DDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMP 224 (343)
T ss_dssp GGTEEEEEEEC----TTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSC
T ss_pred CCCEEEEEEec----CCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccC
Confidence 89999999997 3 33321 2222 334788999999999776555 789999999964 2221 1110000
Q ss_pred c--cccccceeeeCCCCCCccCC--CCCcceEEEeCCc--c-c---------eeeEEEeeCCCCC
Q 015438 359 R--SYEWDYRWMDYPPQARDLKH--PCDQSVATYKGHS--V-L---------RTLIRCHFSPVYR 407 (407)
Q Consensus 359 ~--~~~~~v~~~~~~~~~~~l~~--~~~~~v~~~~gh~--~-~---------~~~~~~~fsp~~~ 407 (407)
. .....+..+.|+|+++.|.+ ..++.+.+|+-.. . . ..+..+.|+|+.+
T Consensus 225 ~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 289 (343)
T 1ri6_A 225 ENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGK 289 (343)
T ss_dssp TTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSS
T ss_pred ccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCC
Confidence 0 11223457899999976643 3578889987551 0 1 1134568888864
No 148
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.85 E-value=7.5e-19 Score=160.34 Aligned_cols=258 Identities=12% Similarity=0.122 Sum_probs=164.4
Q ss_pred CCCceEEEEECCCCCEEEEEeCC----CeEEEEEcCCC-eEEeEeeeccccceEEEEEEECCCCCeEEEEe-CCCeEEEE
Q 015438 123 TTSRAYVSQFSADGSLFVAGFQA----SQIRIYDVERG-WKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS-MSPIVHIV 196 (407)
Q Consensus 123 h~~~v~~~~~s~~~~~l~~~~~d----g~i~iwd~~~~-~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~dg~i~vw 196 (407)
+...+..++|+|+|++|++++.+ +.|.+|+++.. ..+........+...+..+++ ++++|++++ .++.|.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 56777889999999999998875 79999988652 122222222223334667777 788777766 67899999
Q ss_pred ECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEee-CCCeEEEEEcCCCee------e-------
Q 015438 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-SDDCIYVYDLEANKL------S------- 262 (407)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~------~------- 262 (407)
++................+. .......+...+.+++|+|+|++|++++ .++.|.+|++..... +
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~ 203 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGS--GPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPE 203 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCC--CSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCC--CCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccccc
Confidence 99754332211110000000 0000111233478899999999766554 578999999875431 1
Q ss_pred eeeeccCCCeEEEEecCCCCCEEEEEe-CCCcEEEEeCcccCCCCce--eeee---ccccCCeEEEEecCCCCEEEEEeC
Q 015438 263 LRILAHTSDVNTVCFGDESGHLIYSGS-DDNLCKVWDRRCLNVKGKP--AGVL---MGHLEGITFIDSRGDGRYLISNGK 336 (407)
Q Consensus 263 ~~~~~~~~~v~~i~~s~~~~~~l~s~~-~d~~i~vwd~~~~~~~~~~--~~~~---~~~~~~i~~~~~s~~~~~l~s~~~ 336 (407)
.....+...+..++|+ ++++++++++ .++.|.+||+. .+.. +..+ ..+...+..++|+|||++|+++..
T Consensus 204 ~~~~~~~~~~~~~~~s-pdg~~l~v~~~~~~~v~v~~~~----~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~ 278 (361)
T 3scy_A 204 AFKVAPGSGPRHLIFN-SDGKFAYLINEIGGTVIAFRYA----DGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNR 278 (361)
T ss_dssp EEECCTTCCEEEEEEC-TTSSEEEEEETTTCEEEEEEEE----TTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEEC
T ss_pred ceecCCCCCCeEEEEc-CCCCEEEEEcCCCCeEEEEEec----CCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECC
Confidence 1122345567899998 7888777666 68999999997 4432 2222 233345789999999999977665
Q ss_pred C--CcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCCC--CCcceEEEeC
Q 015438 337 D--QAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHP--CDQSVATYKG 390 (407)
Q Consensus 337 d--g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~v~~~~g 390 (407)
+ +.|.+|++............... ...+..++|+|++++|.++ .++.+.+|.-
T Consensus 279 ~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 279 LKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp SSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred CCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEE
Confidence 4 89999999632111111110111 3456789999999877655 4678888653
No 149
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.85 E-value=4.8e-20 Score=179.30 Aligned_cols=230 Identities=15% Similarity=0.076 Sum_probs=162.2
Q ss_pred CCceEEEEECCCCCEEEEEeC-CCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeC---CCeEEEEECC
Q 015438 124 TSRAYVSQFSADGSLFVAGFQ-ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM---SPIVHIVDVG 199 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~---dg~i~vwd~~ 199 (407)
..+|++++|+|||++||+++. ||.++||+++++... . ....+...+..+.|+|| +.+++++. +....+|.+.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~--lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~ 96 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-K--LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVN 96 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-E--CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-e--eecccccccccccCCCC-eEEEEeccCCCCcceEEEEEe
Confidence 457999999999999999877 999999999766432 2 12223357999999999 77777664 4445565543
Q ss_pred C---CceeccccccccccceeeeecCCCCccccEEEEEEeCCCC--EEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEE
Q 015438 200 S---GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR--ELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNT 274 (407)
Q Consensus 200 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~ 274 (407)
. +....+... . .+...+|+|+|+ .+++++. +.+.+||+.+++...... +.. .+
T Consensus 97 ~~~~g~~~~l~~~----------------~--~~~~~~~s~dg~~~~~~s~~~-~~~~l~d~~~g~~~~l~~-~~~--~~ 154 (582)
T 3o4h_A 97 TSRPGEEQRLEAV----------------K--PMRILSGVDTGEAVVFTGATE-DRVALYALDGGGLRELAR-LPG--FG 154 (582)
T ss_dssp TTSTTCCEECTTS----------------C--SBEEEEEEECSSCEEEEEECS-SCEEEEEEETTEEEEEEE-ESS--CE
T ss_pred ccCCCccccccCC----------------C--CceeeeeCCCCCeEEEEecCC-CCceEEEccCCcEEEeec-CCC--ce
Confidence 3 221111110 0 233568888885 3444444 456699999887654443 333 78
Q ss_pred EEecCCCCCEEEEEeCC----CcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCC--cEEEEECCCC
Q 015438 275 VCFGDESGHLIYSGSDD----NLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQ--AIKLWDIRKM 348 (407)
Q Consensus 275 i~~s~~~~~~l~s~~~d----~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg--~i~iwd~~~~ 348 (407)
++|+ ++|++|++++.+ +.|++||+. .++. ..+..|...+..++|+|||++|+++..++ .|++||+.++
T Consensus 155 ~~~s-pDG~~la~~~~~~~~~~~i~~~d~~----~g~~-~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~ 228 (582)
T 3o4h_A 155 FVSD-IRGDLIAGLGFFGGGRVSLFTSNLS----SGGL-RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDG 228 (582)
T ss_dssp EEEE-EETTEEEEEEEEETTEEEEEEEETT----TCCC-EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTC
T ss_pred EEEC-CCCCEEEEEEEcCCCCeEEEEEcCC----CCCc-eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCC
Confidence 9998 889999988776 789999986 4443 46778888899999999999999888888 8999999987
Q ss_pred CCcccccCCCccccccceeee--------CCCCCCccCCC-CCcceEEEeC
Q 015438 349 SSNASCNLGFRSYEWDYRWMD--------YPPQARDLKHP-CDQSVATYKG 390 (407)
Q Consensus 349 ~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~l~~~-~~~~v~~~~g 390 (407)
+.. . ...+...+..+. |+|+++++... .++.+++|.-
T Consensus 229 ~~~-~----~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 229 SVE-D----LELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CEE-E----CCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred cEE-E----ccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 665 2 222333444455 99999776554 5678888874
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.85 E-value=5.9e-20 Score=182.79 Aligned_cols=249 Identities=13% Similarity=0.087 Sum_probs=175.7
Q ss_pred CcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCC-----CeEEeEeeeccccce-------------EEEEEEEC
Q 015438 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVER-----GWKIQKDILAKSLRW-------------TVTDTSLS 178 (407)
Q Consensus 117 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~~-------------~v~~~~~s 178 (407)
...+..+...+.+++|||||++|+++ .++.|++|++.+ +..... ....... .+.++.|+
T Consensus 113 ~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~--~~~~~~~~~~g~~~~~ee~~~~~~~~~S 189 (706)
T 2z3z_A 113 VTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAV--TIDGTETLVYGQAVHQREFGIEKGTFWS 189 (706)
T ss_dssp EEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEES--CSCCBTTEEESSCCGGGCTTCCCSEEEC
T ss_pred eEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEe--ccCCCCCeEcccchhhhhcCCCceEEEC
Confidence 34455667788999999999999986 679999999987 643321 1111111 14789999
Q ss_pred CCCCeEEEEe---------------------------------CCCeEEEEECCCCceeccccccccccceeeeecCCCC
Q 015438 179 PDQRHLVYAS---------------------------------MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGG 225 (407)
Q Consensus 179 p~~~~l~~~~---------------------------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (407)
|||++|++++ .+..|++||+.+++...+... ..
T Consensus 190 pDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~--------------~~ 255 (706)
T 2z3z_A 190 PKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTG--------------EP 255 (706)
T ss_dssp TTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCC--------------SC
T ss_pred CCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccC--------------CC
Confidence 9999999987 346799999988765333211 12
Q ss_pred ccccEEEEEEeCCCCEEEEeeCCC-----eEEEEEcCCCeeeeeee-c-cCC---CeEEEEecCC--CCCEEEEEeCCCc
Q 015438 226 YSFGIFSLKFSTDGRELVAGSSDD-----CIYVYDLEANKLSLRIL-A-HTS---DVNTVCFGDE--SGHLIYSGSDDNL 293 (407)
Q Consensus 226 ~~~~v~~~~~s~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~-~-~~~---~v~~i~~s~~--~~~~l~s~~~d~~ 293 (407)
+...+.+++|+|||+.|++++.++ .|++||+.+++....+. . +.. .+..++|+ + +++++++++.|+.
T Consensus 256 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~s-p~~dg~~l~~~~~~g~ 334 (706)
T 2z3z_A 256 KEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFL-PGSNNQFIWQSRRDGW 334 (706)
T ss_dssp TTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEEC-TTCSSEEEEEECTTSS
T ss_pred CceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceee-cCCCCEEEEEEccCCc
Confidence 444789999999999999887775 89999999984333332 2 222 24678998 6 8889999999999
Q ss_pred EEEEeCcccCCCCceeeeeccccCCeEE-EEecCCCCEEEEEeC-CC----cEEEEECCCCCCcccccCCCcccccccee
Q 015438 294 CKVWDRRCLNVKGKPAGVLMGHLEGITF-IDSRGDGRYLISNGK-DQ----AIKLWDIRKMSSNASCNLGFRSYEWDYRW 367 (407)
Q Consensus 294 i~vwd~~~~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~s~~~-dg----~i~iwd~~~~~~~~~~~~~~~~~~~~v~~ 367 (407)
+++|++. ..+..+..+..+...+.. ++|+|+|+.|+.++. ++ .|..||+.+++. ..+ . +...+..
T Consensus 335 ~~l~~~~---~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~-~~l----~-~~~~~~~ 405 (706)
T 2z3z_A 335 NHLYLYD---TTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKT-KDL----T-PESGMHR 405 (706)
T ss_dssp CEEEEEE---TTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCC-EES----C-CSSSEEE
T ss_pred cEEEEEE---CCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCc-eec----c-CCCceEE
Confidence 9999875 245667777778777877 799999998876654 44 577777776542 111 1 2334677
Q ss_pred eeCCCCCCccCCCC-C----cceEEEeCCc
Q 015438 368 MDYPPQARDLKHPC-D----QSVATYKGHS 392 (407)
Q Consensus 368 ~~~~~~~~~l~~~~-~----~~v~~~~gh~ 392 (407)
+.|+|+++.++... + ..+.+|+..+
T Consensus 406 ~~~spdg~~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 406 TQLSPDGSAIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp EEECTTSSEEEEEEECSSCSCEEEEEESSS
T ss_pred EEECCCCCEEEEEecCCCCCcEEEEEECCC
Confidence 89999998776432 1 3477786543
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.84 E-value=1.5e-19 Score=187.36 Aligned_cols=251 Identities=13% Similarity=0.085 Sum_probs=185.7
Q ss_pred eeeeecc-CCCCcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeec--------cccceEEEEEEE
Q 015438 107 MLSRYLP-VNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILA--------KSLRWTVTDTSL 177 (407)
Q Consensus 107 ~~~~~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--------~~~~~~v~~~~~ 177 (407)
.+|.... ......+..|. .+...+|+|+|++|+++ .++.|++|++... .+...... ..+...+.+++|
T Consensus 227 ~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~-~l~~l~~~~~~~~~~~~~~~~~v~~~~~ 303 (1045)
T 1k32_A 227 QIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTE-KIEKIEIGDLESPEDRIISIPSKFAEDF 303 (1045)
T ss_dssp EEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTC-CEEECCCCCCCBCCSEEEECGGGGEEEE
T ss_pred EEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCce-EeeeeccCcccccccccccccccceeee
Confidence 3444332 33444555555 46778999999999988 4899999998543 23221110 012235889999
Q ss_pred C-CCCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccc-cEEEEEEeCCCCEEEEeeCCCeEE-EE
Q 015438 178 S-PDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSF-GIFSLKFSTDGRELVAGSSDDCIY-VY 254 (407)
Q Consensus 178 s-p~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~dg~i~-i~ 254 (407)
+ |+++.|++++ ++.|.+|++..+....+. .+.. .+..++|+ +|+.|++++.++.++ +|
T Consensus 304 S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~ 364 (1045)
T 1k32_A 304 SPLDGDLIAFVS-RGQAFIQDVSGTYVLKVP-----------------EPLRIRYVRRGGD-TKVAFIHGTREGDFLGIY 364 (1045)
T ss_dssp EECGGGCEEEEE-TTEEEEECTTSSBEEECS-----------------CCSCEEEEEECSS-SEEEEEEEETTEEEEEEE
T ss_pred cCCCCCEEEEEE-cCEEEEEcCCCCceEEcc-----------------CCCcceEEeeeEc-CCCeEEEEECCCceEEEE
Confidence 9 9999999987 789999999876543321 1333 68899999 999999998888899 99
Q ss_pred EcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEE
Q 015438 255 DLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISN 334 (407)
Q Consensus 255 d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~ 334 (407)
|+.+++.. .+..|...+..++|+ +++++|++++.++.|++||+. .++......+|...+..++|+|||++|+++
T Consensus 365 d~~~~~~~-~l~~~~~~~~~~~~S-pDG~~la~~~~~~~v~~~d~~----tg~~~~~~~~~~~~v~~~~~SpDG~~la~~ 438 (1045)
T 1k32_A 365 DYRTGKAE-KFEENLGNVFAMGVD-RNGKFAVVANDRFEIMTVDLE----TGKPTVIERSREAMITDFTISDNSRFIAYG 438 (1045)
T ss_dssp ETTTCCEE-ECCCCCCSEEEEEEC-TTSSEEEEEETTSEEEEEETT----TCCEEEEEECSSSCCCCEEECTTSCEEEEE
T ss_pred ECCCCCce-EecCCccceeeeEEC-CCCCEEEEECCCCeEEEEECC----CCceEEeccCCCCCccceEECCCCCeEEEE
Confidence 99877654 344778899999998 889999999999999999997 777777777898899999999999999988
Q ss_pred eCCC----------cEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCCC-CCcceEEEeC
Q 015438 335 GKDQ----------AIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHP-CDQSVATYKG 390 (407)
Q Consensus 335 ~~dg----------~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~v~~~~g 390 (407)
+.++ .|++||+.+++. .. ...+...+..+.|+|+|+.|... .++....|..
T Consensus 439 ~~~~~~~~~~~~~~~i~l~d~~~g~~-~~----l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~ 500 (1045)
T 1k32_A 439 FPLKHGETDGYVMQAIHVYDMEGRKI-FA----ATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDR 500 (1045)
T ss_dssp EEECSSTTCSCCEEEEEEEETTTTEE-EE----CSCSSSBEEEEEECTTSCEEEEEESCCCCCEECS
T ss_pred ecCccccccCCCCCeEEEEECCCCcE-EE----eeCCCcccCCceEcCCCCEEEEEecccCCcCcch
Confidence 7654 899999998652 22 22334455678899999866543 3444455543
No 152
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.83 E-value=4.5e-19 Score=159.75 Aligned_cols=202 Identities=14% Similarity=0.118 Sum_probs=150.6
Q ss_pred ceEEEEECCCCCEEE-EEeCCCeEEEEEcCCCeEEeEeeecc--ccceEEEEEEECCCCCeEEEEe------------CC
Q 015438 126 RAYVSQFSADGSLFV-AGFQASQIRIYDVERGWKIQKDILAK--SLRWTVTDTSLSPDQRHLVYAS------------MS 190 (407)
Q Consensus 126 ~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~------------~d 190 (407)
.+..++|+|+|++++ ++..++.|.+||+.++..+....... .+...+..++|+|++++|++++ .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 478899999998765 45557899999999886554433211 0122467899999999998886 57
Q ss_pred CeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccC-
Q 015438 191 PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHT- 269 (407)
Q Consensus 191 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~- 269 (407)
+.|.+||+.+++........ ..+.+++|+|++++|+++ ++.|++||+.+++.+..+..+.
T Consensus 115 ~~i~v~d~~~~~~~~~~~~~-----------------~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~ 175 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEAP-----------------RQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSW 175 (337)
T ss_dssp CEEEEEETTTTEEEEEEECC-----------------SSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTT
T ss_pred ceEEEEECCCCcEEEEEeCC-----------------CCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeecccc
Confidence 99999999887654332211 146678899999988877 5789999998877654433211
Q ss_pred -----------------------------------------------------------------CCeEEEEecCCCCCE
Q 015438 270 -----------------------------------------------------------------SDVNTVCFGDESGHL 284 (407)
Q Consensus 270 -----------------------------------------------------------------~~v~~i~~s~~~~~~ 284 (407)
..+.+++|+ +++++
T Consensus 176 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s-~dg~~ 254 (337)
T 1pby_B 176 EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVN-PAKTR 254 (337)
T ss_dssp TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEEC-TTSSE
T ss_pred CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEEC-CCCCE
Confidence 234468998 78888
Q ss_pred EEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccc
Q 015438 285 IYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASC 354 (407)
Q Consensus 285 l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 354 (407)
++++ ++.|.+||+. .++.+..+.. ...+.+++|+|+|++|++++.++.|.+||+.+++.+..+
T Consensus 255 l~~~--~~~v~~~d~~----~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~ 317 (337)
T 1pby_B 255 AFGA--YNVLESFDLE----KNASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQV 317 (337)
T ss_dssp EEEE--ESEEEEEETT----TTEEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEE
T ss_pred EEEe--CCeEEEEECC----CCcCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEE
Confidence 8887 7899999997 6676666653 346789999999999999999999999999988765543
No 153
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.83 E-value=1.1e-18 Score=157.22 Aligned_cols=228 Identities=14% Similarity=0.095 Sum_probs=162.8
Q ss_pred CEEEEEeCCCeEEEEEcCCCeEEeEeeeccccce-EEEEEEECCCCCeEEE-EeCCCeEEEEECCCCceecccccccccc
Q 015438 137 SLFVAGFQASQIRIYDVERGWKIQKDILAKSLRW-TVTDTSLSPDQRHLVY-ASMSPIVHIVDVGSGTMESLANVTEIHD 214 (407)
Q Consensus 137 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~v~~~~~sp~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 214 (407)
+++++++.++.|.+||+.+++.+....... .. .+..++|+|+++.+++ +..++.|.+||+.+++..........
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~-- 77 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIAD--AGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP-- 77 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTT--CTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT--
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCC--CCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc--
Confidence 478899999999999999886655433221 11 3678999999987654 55678999999998876543322110
Q ss_pred ceeeeecCCCCccccEEEEEEeCCCCEEEEee------------CCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCC
Q 015438 215 GLDFSAADDGGYSFGIFSLKFSTDGRELVAGS------------SDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESG 282 (407)
Q Consensus 215 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------------~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~ 282 (407)
..+...+..++|+|+|++|+++. .++.|.+||+.+++.+..+.. ...+.+++|+ +++
T Consensus 78 ---------~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s-~dg 146 (337)
T 1pby_B 78 ---------EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWA-RDG 146 (337)
T ss_dssp ---------TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEEC-TTS
T ss_pred ---------ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEEC-CCC
Confidence 00122456789999999988886 579999999999888777754 4567889998 777
Q ss_pred CEEEEEeCCCcEEEEeCcccCCCCceeeeec-------------------------------------------------
Q 015438 283 HLIYSGSDDNLCKVWDRRCLNVKGKPAGVLM------------------------------------------------- 313 (407)
Q Consensus 283 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~------------------------------------------------- 313 (407)
++|+++ ++.|.+||+. .++.+..+.
T Consensus 147 ~~l~~~--~~~i~~~d~~----~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (337)
T 1pby_B 147 SKLYGL--GRDLHVMDPE----AGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTG 220 (337)
T ss_dssp SCEEEE--SSSEEEEETT----TTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEE
T ss_pred CEEEEe--CCeEEEEECC----CCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccc
Confidence 777776 6889999986 222222111
Q ss_pred -----------------cccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCc
Q 015438 314 -----------------GHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARD 376 (407)
Q Consensus 314 -----------------~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 376 (407)
.+...+.+++|+|+|++|+++ ++.|.+||+.+++....+.. ...+..+.|+|+++.
T Consensus 221 v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-----~~~~~~~~~s~dg~~ 293 (337)
T 1pby_B 221 LLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL-----PHSYYSVNVSTDGST 293 (337)
T ss_dssp EEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC-----SSCCCEEEECTTSCE
T ss_pred eEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC-----CCceeeEEECCCCCE
Confidence 122345679999999999988 79999999998766544322 234567899999975
Q ss_pred c-CCCCCcceEEEeCCc
Q 015438 377 L-KHPCDQSVATYKGHS 392 (407)
Q Consensus 377 l-~~~~~~~v~~~~gh~ 392 (407)
| ....++.|.+|+-.+
T Consensus 294 l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 294 VWLGGALGDLAAYDAET 310 (337)
T ss_dssp EEEESBSSEEEEEETTT
T ss_pred EEEEcCCCcEEEEECcC
Confidence 4 445678899998654
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.83 E-value=6.8e-19 Score=159.48 Aligned_cols=236 Identities=14% Similarity=0.150 Sum_probs=165.0
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEE-EeCCCeEEEEECCCCceeccc
Q 015438 129 VSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVY-ASMSPIVHIVDVGSGTMESLA 207 (407)
Q Consensus 129 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~dg~i~vwd~~~~~~~~~~ 207 (407)
.+++++++.++++++.++.|++||+.+++......... ...+..++|+|+++++++ +..++.|.+||+.+++.....
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPD--KFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSS--CCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCC--CCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEE
Confidence 45688889999999999999999999886554433221 113678999999986654 457899999999988754433
Q ss_pred cccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCC------------CeEEEEEcCCCeee---eeeeccCCCe
Q 015438 208 NVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD------------DCIYVYDLEANKLS---LRILAHTSDV 272 (407)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------------g~i~i~d~~~~~~~---~~~~~~~~~v 272 (407)
...... ......+..++|+|+|++|++++.+ +.|.+||+.+++.. ..+ .+...+
T Consensus 82 ~~~~~~----------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~ 150 (349)
T 1jmx_B 82 NLSSVP----------GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF-PMPRQV 150 (349)
T ss_dssp ESCCST----------TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE-ECCSSC
T ss_pred Eccccc----------ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec-cCCCcc
Confidence 221100 0001236779999999999998865 89999999885432 333 334468
Q ss_pred EEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccc-------------------------------------
Q 015438 273 NTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGH------------------------------------- 315 (407)
Q Consensus 273 ~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~------------------------------------- 315 (407)
.+++|+ ++++ +++++. .|.+||+. +++.+..+..+
T Consensus 151 ~~~~~s-~dg~-l~~~~~--~i~~~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 222 (349)
T 1jmx_B 151 YLMRAA-DDGS-LYVAGP--DIYKMDVK----TGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDD 222 (349)
T ss_dssp CCEEEC-TTSC-EEEESS--SEEEECTT----TCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC---
T ss_pred cceeEC-CCCc-EEEccC--cEEEEeCC----CCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCC
Confidence 899998 7777 555543 49999987 44444333211
Q ss_pred -------------------------------cCCeEEEEecC-CCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccc
Q 015438 316 -------------------------------LEGITFIDSRG-DGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEW 363 (407)
Q Consensus 316 -------------------------------~~~i~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 363 (407)
...+..++|+| ++++++++ ++.|.+||+.+++....+.. ..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-----~~ 295 (349)
T 1jmx_B 223 KQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-----DH 295 (349)
T ss_dssp ----CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-----SS
T ss_pred cCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-----CC
Confidence 11355778889 99999988 88999999998776544322 23
Q ss_pred cceeeeCCCCCCccC-CCCCcceEEEeCCc
Q 015438 364 DYRWMDYPPQARDLK-HPCDQSVATYKGHS 392 (407)
Q Consensus 364 ~v~~~~~~~~~~~l~-~~~~~~v~~~~gh~ 392 (407)
.+..++|+|+++.|. ...++.|.+|+..+
T Consensus 296 ~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 296 TYYCVAFDKKGDKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp CCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred CccceEECCCCCEEEEecCCCeEEEEeccc
Confidence 456789999986554 45578899998765
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.83 E-value=4.1e-20 Score=184.33 Aligned_cols=241 Identities=12% Similarity=0.048 Sum_probs=157.5
Q ss_pred ceEEEEECCCCCEEEEEeC---------CCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEE
Q 015438 126 RAYVSQFSADGSLFVAGFQ---------ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (407)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vw 196 (407)
.|.+++|||||++|++++. ++.|++||+.++..+.... . ...+..++|||||+.|+++. ++.|++|
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~-l---~~~~~~~~~SPDG~~la~~~-~~~i~~~ 135 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE-L---PRPIQYLCWSPVGSKLAYVY-QNNIYLK 135 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC-C---CSSBCCEEECSSTTCEEEEE-TTEEEEE
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccccee-c---CcccccceECCCCCEEEEEE-CCeEEEE
Confidence 4899999999999998876 6899999999885421011 1 12478899999999999985 7899999
Q ss_pred ECCCCceeccccccccccceeeeecCCCCccc---------cEEEEEEeCCCCEEEEeeCCC------------------
Q 015438 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSF---------GIFSLKFSTDGRELVAGSSDD------------------ 249 (407)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~v~~~~~s~~~~~l~~~~~dg------------------ 249 (407)
++.+++...+..... ....+ .|+.. ...+++|+|||++|++++.|.
T Consensus 136 ~~~~g~~~~l~~~~~--~~~v~-----~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~ 208 (719)
T 1z68_A 136 QRPGDPPFQITFNGR--ENKIF-----NGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPR 208 (719)
T ss_dssp SSTTSCCEECCCCCB--TTTEE-----ESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCE
T ss_pred eCCCCCcEEEecCCC--cCCeE-----cccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCcc
Confidence 998876543321110 00000 01111 125799999999999987652
Q ss_pred ----------------eEEEEEcCCCeee--------eeeeccCCCeEEEEecCCCCCEEEEEeCC----CcEEEEe---
Q 015438 250 ----------------CIYVYDLEANKLS--------LRILAHTSDVNTVCFGDESGHLIYSGSDD----NLCKVWD--- 298 (407)
Q Consensus 250 ----------------~i~i~d~~~~~~~--------~~~~~~~~~v~~i~~s~~~~~~l~s~~~d----~~i~vwd--- 298 (407)
.|++||+.+++.. ..+..|...+..++|+ ++++++++.... ..|.+||
T Consensus 209 ~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S-pD~~~~~~~~~~~~~~~~l~~~d~~~ 287 (719)
T 1z68_A 209 TINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWV-TDERVCLQWLKRVQNVSVLSICDFRE 287 (719)
T ss_dssp EEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEES-SSSEEEEEEEESSTTEEEEEEEEECS
T ss_pred ceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEe-CCCeEEEEEeccccCeEEEEEEcccC
Confidence 7899999987653 1233577789999999 557777775432 2488899
Q ss_pred -CcccCCCCceeeee----ccccCCeE-----EEEecCCCCEEEE--EeCCC--cEEEEECCCCCCcccccCCCcccccc
Q 015438 299 -RRCLNVKGKPAGVL----MGHLEGIT-----FIDSRGDGRYLIS--NGKDQ--AIKLWDIRKMSSNASCNLGFRSYEWD 364 (407)
Q Consensus 299 -~~~~~~~~~~~~~~----~~~~~~i~-----~~~~s~~~~~l~s--~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~ 364 (407)
+. .++....+ .+|...+. .+.|+|||+.|+. +..+| .|.+||+.+.+.. . .....+.
T Consensus 288 ~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~-~----lt~~~~~ 358 (719)
T 1z68_A 288 DWQ----TWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAI-Q----ITSGKWE 358 (719)
T ss_dssp SSS----SEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCE-E----CSCSSSC
T ss_pred CCC----CCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceE-e----cccCceE
Confidence 65 44444444 35666666 7899999996654 44555 4777777665422 1 2233455
Q ss_pred ceeeeCCCCCC-ccCCCCC-----cceEEEe
Q 015438 365 YRWMDYPPQAR-DLKHPCD-----QSVATYK 389 (407)
Q Consensus 365 v~~~~~~~~~~-~l~~~~~-----~~v~~~~ 389 (407)
+..+.+. +++ ++..+.+ +...+|.
T Consensus 359 v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~ 388 (719)
T 1z68_A 359 AINIFRV-TQDSLFYSSNEFEEYPGRRNIYR 388 (719)
T ss_dssp EEEEEEE-CSSEEEEEESCGGGCTTCBEEEE
T ss_pred EEEEEEE-eCCEEEEEEecCCCCCceEEEEE
Confidence 5555545 444 3333332 4556664
No 156
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.82 E-value=6.8e-18 Score=153.07 Aligned_cols=211 Identities=13% Similarity=0.100 Sum_probs=144.4
Q ss_pred ccCCCceEEEEECCCCCEEEEEe-CCCeEEEEEcCCCeEEeEeeec--cc-------cceEEEEEEECCCCCeEEEEeCC
Q 015438 121 DQTTSRAYVSQFSADGSLFVAGF-QASQIRIYDVERGWKIQKDILA--KS-------LRWTVTDTSLSPDQRHLVYASMS 190 (407)
Q Consensus 121 ~~h~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~--~~-------~~~~v~~~~~sp~~~~l~~~~~d 190 (407)
..+...+..++|+|+|++|++++ .++.|.+|++............ .+ ....+.+++|+|+++++++...+
T Consensus 82 ~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~ 161 (347)
T 3hfq_A 82 VAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS 161 (347)
T ss_dssp EEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT
T ss_pred ecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC
Confidence 34677889999999999988887 6799999999632122111111 11 12248889999999966666678
Q ss_pred CeEEEEECC-CCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEE-eeCCCeEEEEEcCC--Cee--eee
Q 015438 191 PIVHIVDVG-SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA-GSSDDCIYVYDLEA--NKL--SLR 264 (407)
Q Consensus 191 g~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~dg~i~i~d~~~--~~~--~~~ 264 (407)
+.|.+|++. ++.......... .....+..++|+|+|+++++ +..++.|.+|++.. ++. +..
T Consensus 162 ~~v~~~~~~~~g~~~~~~~~~~-------------~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~ 228 (347)
T 3hfq_A 162 DKVYVYNVSDAGQLSEQSVLTM-------------EAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGI 228 (347)
T ss_dssp TEEEEEEECTTSCEEEEEEEEC-------------CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEE
T ss_pred CEEEEEEECCCCcEEEeeeEEc-------------CCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeee
Confidence 899999998 443322111100 01124678999999996665 56688999999874 443 222
Q ss_pred eeccC------CCeEEEEecCCCCCEE-EEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeC-
Q 015438 265 ILAHT------SDVNTVCFGDESGHLI-YSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGK- 336 (407)
Q Consensus 265 ~~~~~------~~v~~i~~s~~~~~~l-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~- 336 (407)
+.... ..+..++|+ +++++| ++...++.|.+||+.... ....+..+..+...+..++|+|||++|++++.
T Consensus 229 ~~~~~~~~~~~~~~~~i~~s-pdG~~l~v~~~~~~~v~v~~~~~~g-~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~ 306 (347)
T 3hfq_A 229 VKTIPADYTAHNGAAAIRLS-HDGHFLYVSNRGYNTLAVFAVTADG-HLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQN 306 (347)
T ss_dssp EESSCTTCCSCCEEEEEEEC-TTSCEEEEEEETTTEEEEEEECGGG-CEEEEEEEECSSSCCCEEEECTTSSEEEEEETT
T ss_pred eeecCCCCCCCCcceeEEEC-CCCCEEEEEeCCCCEEEEEEECCCC-cEEEeEEEecCCCCcCeEEECCCCCEEEEEEcC
Confidence 32222 348889998 778866 566678999999986211 22445555556667899999999999888876
Q ss_pred CCcEEEEECC
Q 015438 337 DQAIKLWDIR 346 (407)
Q Consensus 337 dg~i~iwd~~ 346 (407)
++.|.+|+++
T Consensus 307 ~~~v~v~~~d 316 (347)
T 3hfq_A 307 TDNATLYARD 316 (347)
T ss_dssp TTEEEEEEEC
T ss_pred CCcEEEEEEe
Confidence 4899999654
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.82 E-value=1.1e-18 Score=158.01 Aligned_cols=204 Identities=12% Similarity=0.094 Sum_probs=148.2
Q ss_pred ceEEEEECCCCCEEE-EEeCCCeEEEEEcCCCeEEeEeeecccc---ceEEEEEEECCCCCeEEEEeCC-----------
Q 015438 126 RAYVSQFSADGSLFV-AGFQASQIRIYDVERGWKIQKDILAKSL---RWTVTDTSLSPDQRHLVYASMS----------- 190 (407)
Q Consensus 126 ~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~---~~~v~~~~~sp~~~~l~~~~~d----------- 190 (407)
.+..++|+|+|++++ ++..++.|.+||+.+++........... ...+..++|+|++++|++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 123 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 123 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence 577899999998665 4556899999999988655443221110 2336789999999999998865
Q ss_pred -CeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccC
Q 015438 191 -PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHT 269 (407)
Q Consensus 191 -g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 269 (407)
+.|.+||+.+++......... +...+.+++|+|+|+ +++++. .|++||+.+++.+..+..+.
T Consensus 124 ~~~i~~~d~~~~~~~~~~~~~~--------------~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~ 186 (349)
T 1jmx_B 124 PPRLEVFSTADGLEAKPVRTFP--------------MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRN 186 (349)
T ss_dssp CCEEEEEEGGGGGGBCCSEEEE--------------CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTT
T ss_pred CCeEEEEECCCccccceeeecc--------------CCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccc
Confidence 899999998754332221111 112577899999999 665543 49999999888766554321
Q ss_pred --------------------------------------------------------------------CCeEEEEecCC-
Q 015438 270 --------------------------------------------------------------------SDVNTVCFGDE- 280 (407)
Q Consensus 270 --------------------------------------------------------------------~~v~~i~~s~~- 280 (407)
..+..++|+ +
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-p~ 265 (349)
T 1jmx_B 187 WNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRS-PK 265 (349)
T ss_dssp CCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEEC-SS
T ss_pred cCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEec-CC
Confidence 134466776 5
Q ss_pred CCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccc
Q 015438 281 SGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASC 354 (407)
Q Consensus 281 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 354 (407)
++++++++ ++.|.+||+. +++.+..+.. ...+.+++|+|+|++|++++.++.|.+||+.+++.+..+
T Consensus 266 dg~~l~~~--~~~v~~~d~~----~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 266 DPNQIYGV--LNRLAKYDLK----QRKLIKAANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNI 332 (349)
T ss_dssp CTTEEEEE--ESEEEEEETT----TTEEEEEEEC-SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEE
T ss_pred CCCEEEEE--cCeEEEEECc----cCeEEEEEcC-CCCccceEECCCCCEEEEecCCCeEEEEeccccceeeee
Confidence 88888887 8899999998 6776666653 345789999999999998888999999999987765443
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.82 E-value=1.4e-19 Score=180.49 Aligned_cols=223 Identities=12% Similarity=0.092 Sum_probs=153.4
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccce---EEEEEEECCCCCeEEEEeC---------CCeEEEE
Q 015438 129 VSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRW---TVTDTSLSPDQRHLVYASM---------SPIVHIV 196 (407)
Q Consensus 129 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~---~v~~~~~sp~~~~l~~~~~---------dg~i~vw 196 (407)
.++|+|+|++++ .+.|+.|++||+.++..... ...+.. .+.+++|||||++|++++. ++.|++|
T Consensus 20 ~~~~s~dg~~~~-~~~d~~i~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 20 FPNWISGQEYLH-QSADNNIVLYNIETGQSYTI---LSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCEESSSSEEEE-ECTTSCEEEEESSSCCEEEE---ECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred ccEECCCCeEEE-EcCCCCEEEEEcCCCcEEEE---EccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEE
Confidence 678999996555 45799999999998854432 222221 2789999999999998876 7899999
Q ss_pred ECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeee-eccCCCe---
Q 015438 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRI-LAHTSDV--- 272 (407)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~v--- 272 (407)
|+.+++......+. ..+..++|||||+.|+++. ++.|++||+.+++..... .++...+
T Consensus 96 d~~~g~~~~~~~l~-----------------~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g 157 (719)
T 1z68_A 96 DLSNGEFVRGNELP-----------------RPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNG 157 (719)
T ss_dssp ETTTTEECCSSCCC-----------------SSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEES
T ss_pred ECCCCccccceecC-----------------cccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcc
Confidence 99988762111111 1477899999999999886 779999999888764432 1222222
Q ss_pred --------------EEEEecCCCCCEEEEEeCCC----------------------------------cEEEEeCcccCC
Q 015438 273 --------------NTVCFGDESGHLIYSGSDDN----------------------------------LCKVWDRRCLNV 304 (407)
Q Consensus 273 --------------~~i~~s~~~~~~l~s~~~d~----------------------------------~i~vwd~~~~~~ 304 (407)
.+++|| ++|+.|++++.|. .|++||+.
T Consensus 158 ~~~~v~~ee~~~~~~~~~wS-PDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~---- 232 (719)
T 1z68_A 158 IPDWVYEEEMLATKYALWWS-PNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTT---- 232 (719)
T ss_dssp SCCHHHHHHTTCSSCCEEEC-TTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESS----
T ss_pred cccceeeeecccCcccEEEC-CCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECC----
Confidence 489998 8899999887552 78899997
Q ss_pred CCcee--------eeeccccCCeEEEEecCCCCEEEEEeCC----CcEEEEE----CCCCCCccccc---CCCccccc--
Q 015438 305 KGKPA--------GVLMGHLEGITFIDSRGDGRYLISNGKD----QAIKLWD----IRKMSSNASCN---LGFRSYEW-- 363 (407)
Q Consensus 305 ~~~~~--------~~~~~~~~~i~~~~~s~~~~~l~s~~~d----g~i~iwd----~~~~~~~~~~~---~~~~~~~~-- 363 (407)
.++.. ..+.+|...+..++|+||++++++.... ..|.+|| +.+++...... ........
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 312 (719)
T 1z68_A 233 YPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGF 312 (719)
T ss_dssp CHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSS
T ss_pred CCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccc
Confidence 44432 1234677789999999998877774432 2488899 77766544331 11111111
Q ss_pred cceeeeCCCCCCccC
Q 015438 364 DYRWMDYPPQARDLK 378 (407)
Q Consensus 364 ~v~~~~~~~~~~~l~ 378 (407)
....+.|+|+++.+.
T Consensus 313 ~~~~~~~spdg~~l~ 327 (719)
T 1z68_A 313 FVSTPVFSYDAISYY 327 (719)
T ss_dssp SCCCCEECTTSSCEE
T ss_pred cCCccEECCCCCeEE
Confidence 012577899998543
No 159
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.81 E-value=1.6e-18 Score=159.71 Aligned_cols=248 Identities=15% Similarity=0.049 Sum_probs=162.0
Q ss_pred ccccCCCceEE-----EEECCCCCEEEEEeC-CC--eEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCC
Q 015438 119 PVDQTTSRAYV-----SQFSADGSLFVAGFQ-AS--QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS 190 (407)
Q Consensus 119 ~~~~h~~~v~~-----~~~s~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d 190 (407)
.+..|...... .+|||||++|+.++. ++ .|.+||+.++.... ....+...+..+.|+||++.|++++.+
T Consensus 25 ~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~---lt~~~~~~~~~~~~spdg~~l~~~~~~ 101 (388)
T 3pe7_A 25 RLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQ---LTEGRGDNTFGGFLSPDDDALFYVKDG 101 (388)
T ss_dssp ECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEE---CCCSSCBCSSSCEECTTSSEEEEEETT
T ss_pred EecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEE---eeeCCCCCccceEEcCCCCEEEEEeCC
Confidence 34455555555 789999999998887 66 48889998875432 223333334467899999999999999
Q ss_pred CeEEEEECCCCceeccccccccccceeeeecCCCCccccEEE--EEEeCCCCEEEEe----------------------e
Q 015438 191 PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFS--LKFSTDGRELVAG----------------------S 246 (407)
Q Consensus 191 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~s~~~~~l~~~----------------------~ 246 (407)
+.|++||+.+++...+..... ..+.. ..++|++++++.. .
T Consensus 102 ~~l~~~d~~~g~~~~~~~~~~----------------~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (388)
T 3pe7_A 102 RNLMRVDLATLEENVVYQVPA----------------EWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTK 165 (388)
T ss_dssp TEEEEEETTTCCEEEEEECCT----------------TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGC
T ss_pred CeEEEEECCCCcceeeeechh----------------hcccccceeECCCCCeeccccccCcccccccccchhhhhhccC
Confidence 999999999887654432211 12322 3448899887742 2
Q ss_pred CCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCC------CcEEEEeCcccCCCCceeeeecccc--CC
Q 015438 247 SDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDD------NLCKVWDRRCLNVKGKPAGVLMGHL--EG 318 (407)
Q Consensus 247 ~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~--~~ 318 (407)
.+..|++||+.+++.. .+..+...+..++|+|.+++.|+....+ ..|.++|.. +.....+..+. ..
T Consensus 166 ~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~-----~~~~~~l~~~~~~~~ 239 (388)
T 3pe7_A 166 PCCRLMRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINED-----GTNMRKVKTHAEGES 239 (388)
T ss_dssp CCEEEEEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETT-----SCCCEESCCCCTTEE
T ss_pred CcceEEEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCC-----CCceEEeeeCCCCcc
Confidence 4468999999988754 4446677899999993278888776653 378888874 33344444444 35
Q ss_pred eEEEEecCCCCEEEEEeC-CC----cEEEEECCCCCCccccc-CCCccccccceeeeCCCCCCccCC----------CCC
Q 015438 319 ITFIDSRGDGRYLISNGK-DQ----AIKLWDIRKMSSNASCN-LGFRSYEWDYRWMDYPPQARDLKH----------PCD 382 (407)
Q Consensus 319 i~~~~~s~~~~~l~s~~~-dg----~i~iwd~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~----------~~~ 382 (407)
+..++|+|||+.|+..+. ++ .|.+||+.+++...... .......+......|+|+|+.|+. ..+
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 319 (388)
T 3pe7_A 240 CTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIEND 319 (388)
T ss_dssp EEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCC
T ss_pred cccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCC
Confidence 788999999998865543 22 39999999876432111 101111122333468899987764 334
Q ss_pred cceEEEeCC
Q 015438 383 QSVATYKGH 391 (407)
Q Consensus 383 ~~v~~~~gh 391 (407)
..|.+|+-.
T Consensus 320 ~~i~~~d~~ 328 (388)
T 3pe7_A 320 PFLYVFNMK 328 (388)
T ss_dssp CEEEEEETT
T ss_pred CEEEEEecc
Confidence 567777644
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.80 E-value=6.7e-18 Score=154.32 Aligned_cols=249 Identities=10% Similarity=0.039 Sum_probs=162.4
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcC-CCeEEeEeeeccccceEEEEEEECCCCCe--EEEEe-------------
Q 015438 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVE-RGWKIQKDILAKSLRWTVTDTSLSPDQRH--LVYAS------------- 188 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~v~~~~~sp~~~~--l~~~~------------- 188 (407)
..+..++|+|+|++|++++.+ .|.+|++. ++...... ...... .+..++|+|++++ ++++.
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~-~~~~~g-~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEA-SHPIGG-HPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEE-EEECCS-SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEee-EeecCC-CCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 467789999999999998887 99999997 66443221 111111 2455899999995 44543
Q ss_pred CCCeEEEEECCC-CceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC-CCeEEEEEcC-CCeee--e
Q 015438 189 MSPIVHIVDVGS-GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-DDCIYVYDLE-ANKLS--L 263 (407)
Q Consensus 189 ~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~i~d~~-~~~~~--~ 263 (407)
.++.+.+|++.. ++......... ..+...+.+++|+|+|++|+++.. ++.|++||+. +++.. .
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~------------~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~ 184 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYE------------YQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVG 184 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEE------------CCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEE
T ss_pred CCceEEEEccCCCCcCcceEeeEE------------eCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEee
Confidence 689999999973 44322211100 012236889999999998887653 6799999998 67643 2
Q ss_pred eee--ccCCCeEEEEecCCCCCEEEEEeC-CCcEEEEeCcccCCCCcee------eeec----cccC------CeEEEE-
Q 015438 264 RIL--AHTSDVNTVCFGDESGHLIYSGSD-DNLCKVWDRRCLNVKGKPA------GVLM----GHLE------GITFID- 323 (407)
Q Consensus 264 ~~~--~~~~~v~~i~~s~~~~~~l~s~~~-d~~i~vwd~~~~~~~~~~~------~~~~----~~~~------~i~~~~- 323 (407)
.+. .+...+..++|+ ++++++++++. ++.|.+|++... +++.. ..+. +|.. .+..++
T Consensus 185 ~~~~~~~g~~p~~~~~s-pdg~~l~v~~~~~~~v~v~~~~~~--~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 261 (365)
T 1jof_A 185 SVDAPDPGDHPRWVAMH-PTGNYLYALMEAGNRICEYVIDPA--THMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCA 261 (365)
T ss_dssp EEECSSTTCCEEEEEEC-TTSSEEEEEETTTTEEEEEEECTT--TCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEE
T ss_pred eEecCCCCCCCCEeEEC-CCCCEEEEEECCCCeEEEEEEeCC--CCcEEEccceEEcCCCCcCCcccccccccccccEEE
Confidence 333 235678999998 78888877764 689999987521 23321 1121 2222 488999
Q ss_pred ecCCCCEEEEEeCC-C-----cEEEEECC-CCCCcccccCCCccccccceeeeCCC---CCCccCCCC--CcceEEEeCC
Q 015438 324 SRGDGRYLISNGKD-Q-----AIKLWDIR-KMSSNASCNLGFRSYEWDYRWMDYPP---QARDLKHPC--DQSVATYKGH 391 (407)
Q Consensus 324 ~s~~~~~l~s~~~d-g-----~i~iwd~~-~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~--~~~v~~~~gh 391 (407)
|+|||++|++++.+ + .|.+|++. +++..... ............++|+| ++++|.+++ ++.|.+|+-.
T Consensus 262 ~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~-~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 262 LTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQL-FLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp ECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEE-EEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred ECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEee-eeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEc
Confidence 99999998877643 2 89999997 33321100 00111233456788889 788776654 4789999654
Q ss_pred c
Q 015438 392 S 392 (407)
Q Consensus 392 ~ 392 (407)
.
T Consensus 341 ~ 341 (365)
T 1jof_A 341 D 341 (365)
T ss_dssp T
T ss_pred h
Confidence 3
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.79 E-value=5.6e-18 Score=169.23 Aligned_cols=229 Identities=10% Similarity=0.041 Sum_probs=153.0
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeecc--ccceEEEEEEECCCCCeEEEEeCC---------CeE
Q 015438 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK--SLRWTVTDTSLSPDQRHLVYASMS---------PIV 193 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d---------g~i 193 (407)
.....++|+|+|++++++ |+.|++||+.++.......... .......++.|||||++|+.++.+ +.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 345688999999988886 8999999999986543211111 111123458899999999998875 567
Q ss_pred EEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeee-eccCCCe
Q 015438 194 HIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRI-LAHTSDV 272 (407)
Q Consensus 194 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~v 272 (407)
.+||+.+++...+.. +...+...+|||||+.||.+. ++.|++||+.+++..... .++...+
T Consensus 95 ~~~d~~~~~~~~l~~-----------------~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~ 156 (740)
T 4a5s_A 95 DIYDLNKRQLITEER-----------------IPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDII 156 (740)
T ss_dssp EEEETTTTEECCSSC-----------------CCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTE
T ss_pred EEEECCCCcEEEccc-----------------CCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccce
Confidence 799999987644321 334689999999999999885 679999999887754322 1222222
Q ss_pred -----------------EEEEecCCCCCEEEEEeCCC------------------------------------cEEEEeC
Q 015438 273 -----------------NTVCFGDESGHLIYSGSDDN------------------------------------LCKVWDR 299 (407)
Q Consensus 273 -----------------~~i~~s~~~~~~l~s~~~d~------------------------------------~i~vwd~ 299 (407)
..+.|| |+|+.|+.++.|. .|++||+
T Consensus 157 ~~g~~~~v~~ee~~~~~~~~~wS-pDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~ 235 (740)
T 4a5s_A 157 YNGITDWVYEEEVFSAYSALWWS-PNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNT 235 (740)
T ss_dssp EESBCCHHHHHHTSSSSBCEEEC-TTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEET
T ss_pred ecCcccccccchhcCCCcceEEC-CCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEEC
Confidence 358998 8899888875332 4777887
Q ss_pred cccCCC---Cc--eeeeec------cccCCeEEEEecCCCCEEEEEeC----CCcEEEEECCCCC----Cccccc---CC
Q 015438 300 RCLNVK---GK--PAGVLM------GHLEGITFIDSRGDGRYLISNGK----DQAIKLWDIRKMS----SNASCN---LG 357 (407)
Q Consensus 300 ~~~~~~---~~--~~~~~~------~~~~~i~~~~~s~~~~~l~s~~~----dg~i~iwd~~~~~----~~~~~~---~~ 357 (407)
. . +. ....+. +|...+..++|+|||+.++.... +..|.+||+.+++ +..... ..
T Consensus 236 ~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~ 311 (740)
T 4a5s_A 236 D----SLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMS 311 (740)
T ss_dssp T----SCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEEC
T ss_pred C----CCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeecc
Confidence 6 4 31 222232 36777999999999997665532 3479999999887 221110 11
Q ss_pred Cccccc--cceeeeCCCCCCccC
Q 015438 358 FRSYEW--DYRWMDYPPQARDLK 378 (407)
Q Consensus 358 ~~~~~~--~v~~~~~~~~~~~l~ 378 (407)
...... ......|+|||+.++
T Consensus 312 ~~~~v~~~~~~~p~fspDG~~l~ 334 (740)
T 4a5s_A 312 TTGWVGRFRPSEPHFTLDGNSFY 334 (740)
T ss_dssp SSSCSSSSSCCCCEECTTSSEEE
T ss_pred CCceEccCcCCCceEcCCCCEEE
Confidence 111111 134577999998544
No 162
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.77 E-value=2.7e-16 Score=143.39 Aligned_cols=210 Identities=10% Similarity=0.131 Sum_probs=138.7
Q ss_pred CCCceEEEEECCCCCEEEEEe-CCCeEEEEEcCCCeEEeEee---ec--------cccceEEEEEEECCCCCeEEEEe-C
Q 015438 123 TTSRAYVSQFSADGSLFVAGF-QASQIRIYDVERGWKIQKDI---LA--------KSLRWTVTDTSLSPDQRHLVYAS-M 189 (407)
Q Consensus 123 h~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~---~~--------~~~~~~v~~~~~sp~~~~l~~~~-~ 189 (407)
+......+++ ++++|++++ .++.|.+|++.....+.... .. ..+...+.+++|+|++++|++++ .
T Consensus 98 ~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 175 (361)
T 3scy_A 98 MGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG 175 (361)
T ss_dssp SSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT
T ss_pred CCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC
Confidence 4556777888 888777766 57899999997542221111 11 01122368899999999776655 5
Q ss_pred CCeEEEEECCCCce------eccc-cccccccceeeeecCCCCccccEEEEEEeCCCCEEEEee-CCCeEEEEEcCCCee
Q 015438 190 SPIVHIVDVGSGTM------ESLA-NVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-SDDCIYVYDLEANKL 261 (407)
Q Consensus 190 dg~i~vwd~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~ 261 (407)
++.|.+|++..... .... ... .... .....+..++|+|+|+++++++ .++.|.+||+.+++.
T Consensus 176 ~~~v~v~~~~~~~~~~~~~~l~~~~~~~------~~~~----~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~ 245 (361)
T 3scy_A 176 TDQIHKFNINPNANADNKEKFLTKGTPE------AFKV----APGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGML 245 (361)
T ss_dssp TTEEEEEEECTTCCTTTCCCCEEEEEEE------EEEC----CTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEE
T ss_pred CCEEEEEEEcCCCCcccccceeeccccc------ceec----CCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCce
Confidence 78999999875432 1000 000 0000 1122567899999999887776 689999999987754
Q ss_pred --eeeee---ccCCCeEEEEecCCCCCEEEEEeC--CCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEE
Q 015438 262 --SLRIL---AHTSDVNTVCFGDESGHLIYSGSD--DNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISN 334 (407)
Q Consensus 262 --~~~~~---~~~~~v~~i~~s~~~~~~l~s~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~ 334 (407)
+..+. .+......++|+ +++++|+++.. ++.|.+|++.........+..+.. ...+..++|+|+|++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~i~~s-pdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~ 323 (361)
T 3scy_A 246 DEIQTVAADTVNAQGSGDIHLS-PDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVA 323 (361)
T ss_dssp EEEEEEESCSSCCCCEEEEEEC-TTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEE
T ss_pred EEeEEEecCCCCCCCcccEEEC-CCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEE
Confidence 22222 233456799998 78888866665 489999998521112223444443 4567899999999999888
Q ss_pred e-CCCcEEEEECC
Q 015438 335 G-KDQAIKLWDIR 346 (407)
Q Consensus 335 ~-~dg~i~iwd~~ 346 (407)
+ .++.|.+|++.
T Consensus 324 ~~~~~~v~v~~~d 336 (361)
T 3scy_A 324 CRDTNVIQIFERD 336 (361)
T ss_dssp ETTTTEEEEEEEC
T ss_pred ECCCCCEEEEEEE
Confidence 7 67899997665
No 163
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.77 E-value=2.4e-16 Score=138.86 Aligned_cols=244 Identities=12% Similarity=0.079 Sum_probs=172.1
Q ss_pred ccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeec---cccceEEEEEEE-CCCCCeEEEEeC-CCeEEE
Q 015438 121 DQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILA---KSLRWTVTDTSL-SPDQRHLVYASM-SPIVHI 195 (407)
Q Consensus 121 ~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~~v~~~~~-sp~~~~l~~~~~-dg~i~v 195 (407)
.++-..+.+++++++|+++++...++.|.+||.. +......... ..+...+..+++ .++++++++... ++.|.+
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 3455678999999999988888889999999987 4333332211 123345889999 577777666643 789999
Q ss_pred EECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeee--ccCCCeE
Q 015438 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL--AHTSDVN 273 (407)
Q Consensus 196 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~ 273 (407)
||. +++....... .+...+..++++|+|+++++...++.|++||.. ++.+..+. .+...+.
T Consensus 105 ~d~-~g~~~~~~~~---------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~ 167 (286)
T 1q7f_A 105 YNQ-YGQFVRKFGA---------------TILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPN 167 (286)
T ss_dssp ECT-TSCEEEEECT---------------TTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEE
T ss_pred ECC-CCcEEEEecC---------------ccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcE
Confidence 994 4443322211 122257899999999988877788999999965 55555553 3445689
Q ss_pred EEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccc--cCCeEEEEecCCCCEEEEEeCCC-cEEEEECCCCCC
Q 015438 274 TVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGH--LEGITFIDSRGDGRYLISNGKDQ-AIKLWDIRKMSS 350 (407)
Q Consensus 274 ~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~s~~~dg-~i~iwd~~~~~~ 350 (407)
.++++ ++++++++...++.|++||.. ++.+..+..+ ...+..++++++|+++++...++ .|.+||.. ++.
T Consensus 168 ~i~~~-~~g~l~v~~~~~~~i~~~~~~-----g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~ 240 (286)
T 1q7f_A 168 GVVVN-DKQEIFISDNRAHCVKVFNYE-----GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQL 240 (286)
T ss_dssp EEEEC-SSSEEEEEEGGGTEEEEEETT-----CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCE
T ss_pred EEEEC-CCCCEEEEECCCCEEEEEcCC-----CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCE
Confidence 99997 778888888889999999974 5555555433 35789999999999888888776 99999954 433
Q ss_pred cccccCCCccccccceeeeCCCCCCccCCCCCcceEEEeCC
Q 015438 351 NASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGH 391 (407)
Q Consensus 351 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~gh 391 (407)
+..+... ........++++|+++++.+..++.|.+|+-.
T Consensus 241 ~~~~~~~--~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~ 279 (286)
T 1q7f_A 241 ISALESK--VKHAQCFDVALMDDGSVVLASKDYRLYIYRYV 279 (286)
T ss_dssp EEEEEES--SCCSCEEEEEEETTTEEEEEETTTEEEEEECS
T ss_pred EEEEccc--CCCCcceeEEECCCCcEEEECCCCeEEEEEcc
Confidence 3332111 11123457889999988877778889999643
No 164
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.76 E-value=5.6e-18 Score=164.69 Aligned_cols=233 Identities=10% Similarity=0.034 Sum_probs=160.4
Q ss_pred cceeeeeccCCCCcccccCC-CceEEEEECCCCCEEEEEeC---CCeEEEEEcCC--CeEEeEeeeccccceEEEEEEEC
Q 015438 105 CHMLSRYLPVNGPWPVDQTT-SRAYVSQFSADGSLFVAGFQ---ASQIRIYDVER--GWKIQKDILAKSLRWTVTDTSLS 178 (407)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~~~~~---dg~i~iwd~~~--~~~~~~~~~~~~~~~~v~~~~~s 178 (407)
...+|.+ .+.....+..|. ..+..++|+|| +.++++.. +....||.+.. ............ +...+|+
T Consensus 45 ~~~lw~~-~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~~~~----~~~~~~s 118 (582)
T 3o4h_A 45 SVNAYLY-DGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVKP----MRILSGV 118 (582)
T ss_dssp EEEEEEE-ETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCEECTTSCS----BEEEEEE
T ss_pred ceeEEEE-cCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccccccCCCC----ceeeeeC
Confidence 3445554 344444555555 68999999999 77777764 45456654432 111112211222 3355778
Q ss_pred CCCCeE-EEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCC----CeEEE
Q 015438 179 PDQRHL-VYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD----DCIYV 253 (407)
Q Consensus 179 p~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~i 253 (407)
|+++.+ ++++.++.+.+||+.+++...+.. +. . .+++|+|||++|++++.+ +.|++
T Consensus 119 ~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~-----------------~~-~-~~~~~spDG~~la~~~~~~~~~~~i~~ 179 (582)
T 3o4h_A 119 DTGEAVVFTGATEDRVALYALDGGGLRELAR-----------------LP-G-FGFVSDIRGDLIAGLGFFGGGRVSLFT 179 (582)
T ss_dssp ECSSCEEEEEECSSCEEEEEEETTEEEEEEE-----------------ES-S-CEEEEEEETTEEEEEEEEETTEEEEEE
T ss_pred CCCCeEEEEecCCCCceEEEccCCcEEEeec-----------------CC-C-ceEEECCCCCEEEEEEEcCCCCeEEEE
Confidence 877643 333444455699998876544321 11 1 678999999999988777 78999
Q ss_pred EEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCC--cEEEEeCcccCCCCceeeeeccccCCeEEEE--------
Q 015438 254 YDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDN--LCKVWDRRCLNVKGKPAGVLMGHLEGITFID-------- 323 (407)
Q Consensus 254 ~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~-------- 323 (407)
||+.+++.. .+..|.+.+..++|+ ++|+.|+++..++ .|++||+. .++.. .+.+|...+..++
T Consensus 180 ~d~~~g~~~-~l~~~~~~~~~~~~S-pDG~~l~~~~~~~~~~i~~~d~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~ 252 (582)
T 3o4h_A 180 SNLSSGGLR-VFDSGEGSFSSASIS-PGMKVTAGLETAREARLVTVDPR----DGSVE-DLELPSKDFSSYRPTAITWLG 252 (582)
T ss_dssp EETTTCCCE-EECCSSCEEEEEEEC-TTSCEEEEEECSSCEEEEEECTT----TCCEE-ECCCSCSHHHHHCCSEEEEEE
T ss_pred EcCCCCCce-EeecCCCccccceEC-CCCCEEEEccCCCeeEEEEEcCC----CCcEE-EccCCCcChhhhhhcccccee
Confidence 999988764 667888889999998 8899999888888 89999997 66665 6677776666667
Q ss_pred ecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCC
Q 015438 324 SRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKH 379 (407)
Q Consensus 324 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 379 (407)
|+|||.++++++.|+.+++|++ ++.... ....+..++|+ +++++..
T Consensus 253 ~spdg~~~~~~~~~g~~~l~~~--g~~~~~-------~~~~v~~~~~s-dg~~l~~ 298 (582)
T 3o4h_A 253 YLPDGRLAVVARREGRSAVFID--GERVEA-------PQGNHGRVVLW-RGKLVTS 298 (582)
T ss_dssp ECTTSCEEEEEEETTEEEEEET--TEEECC-------CSSEEEEEEEE-TTEEEEE
T ss_pred EcCCCcEEEEEEcCCcEEEEEE--CCeecc-------CCCceEEEEec-CCEEEEE
Confidence 9999998999999999999999 433221 11345677888 7776654
No 165
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.75 E-value=4.9e-16 Score=139.77 Aligned_cols=252 Identities=9% Similarity=-0.001 Sum_probs=175.2
Q ss_pred CCceEEEEECCCCCEEEEEeCC------------------------CeEEEEEcCCCeEEeEeeeccccceEEEEEEECC
Q 015438 124 TSRAYVSQFSADGSLFVAGFQA------------------------SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~d------------------------g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp 179 (407)
-+.+.+++++|+|+++++...+ +.|.+||..++...... ...+-..+..++++|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~--~~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSS--GKNLFYLPHGLSIDT 100 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEE--CTTTCSSEEEEEECT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEecc--CCCccCCceEEEECC
Confidence 5679999999999999888776 47999999887654321 223334588999999
Q ss_pred CCCeEEEEeCCCeEEEEECCCCc-eeccccccccccceeeeecCCCCccccEEEEEEeC-CCCEEEEee-CCCeEEEEEc
Q 015438 180 DQRHLVYASMSPIVHIVDVGSGT-MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGS-SDDCIYVYDL 256 (407)
Q Consensus 180 ~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~-~dg~i~i~d~ 256 (407)
+++++++...++.|++|+..... ....+..... .....++-.....++++| ++.++++.+ .++.|++||
T Consensus 101 ~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~-------~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~- 172 (329)
T 3fvz_A 101 DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQ-------PGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS- 172 (329)
T ss_dssp TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTB-------CCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-
T ss_pred CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCC-------CCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-
Confidence 99988888888999999986542 1111100000 000112334688999999 788777776 689999999
Q ss_pred CCCeeeeeeeccC----------CCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeec--cccCCeEEEEe
Q 015438 257 EANKLSLRILAHT----------SDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLM--GHLEGITFIDS 324 (407)
Q Consensus 257 ~~~~~~~~~~~~~----------~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~--~~~~~i~~~~~ 324 (407)
.+++.+..+.... .....|+++|..++++++...++.|++||.. +++.+..+. .+...+..++|
T Consensus 173 ~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~----~G~~~~~~~~~~~~~~~~~~~~ 248 (329)
T 3fvz_A 173 PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD----TKEFVREIKHASFGRNVFAISY 248 (329)
T ss_dssp TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT----TCCEEEEECCTTTTTCEEEEEE
T ss_pred CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC----CCcEEEEEeccccCCCcceeee
Confidence 4576666653222 3378999984448888888889999999996 577777763 45567889999
Q ss_pred cC------CCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCC-CCCcceEEEeC
Q 015438 325 RG------DGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKH-PCDQSVATYKG 390 (407)
Q Consensus 325 s~------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~v~~~~g 390 (407)
+| +|+.+++...+..|++||+.+++.+..+.. ..........++++|++.++.+ ..++.|.+|+-
T Consensus 249 ~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~-~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 249 IPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKP-VRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp ETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECC-SSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEE
T ss_pred cCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcC-CCCccCCeeEEEECCCCCEEEEECCCCEEEEEeC
Confidence 99 333333333456899999998877665422 1223344678899999966654 34678888864
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.75 E-value=9e-17 Score=160.53 Aligned_cols=231 Identities=13% Similarity=0.101 Sum_probs=149.3
Q ss_pred ccceeeeeccCCCCcccccCCC-----ceEEEEECCCCCEEEEEeCC---------CeEEEEEcCCCeEEeEeeeccccc
Q 015438 104 CCHMLSRYLPVNGPWPVDQTTS-----RAYVSQFSADGSLFVAGFQA---------SQIRIYDVERGWKIQKDILAKSLR 169 (407)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~s~~~~~l~~~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~ 169 (407)
....+++....+....+.+|.. ....++|||||++|+.++.+ +.+.+||+.++.... ...+.
T Consensus 36 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~----l~~~~ 111 (740)
T 4a5s_A 36 NNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT----EERIP 111 (740)
T ss_dssp TEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC----SSCCC
T ss_pred CcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE----cccCC
Confidence 3344444444443444555543 23458899999999998875 567799999985332 33344
Q ss_pred eEEEEEEECCCCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCcc---------ccEEEEEEeCCCC
Q 015438 170 WTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYS---------FGIFSLKFSTDGR 240 (407)
Q Consensus 170 ~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~~~~s~~~~ 240 (407)
..+...+|||||+.||.+. ++.|++|++.++....+..... ....+. ++. .....+.|||||+
T Consensus 112 ~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~--~~~~~~-----g~~~~v~~ee~~~~~~~~~wSpDg~ 183 (740)
T 4a5s_A 112 NNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGK--EDIIYN-----GITDWVYEEEVFSAYSALWWSPNGT 183 (740)
T ss_dssp TTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCB--TTTEEE-----SBCCHHHHHHTSSSSBCEEECTTSS
T ss_pred CcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCC--ccceec-----CcccccccchhcCCCcceEECCCCC
Confidence 5689999999999999884 6899999998876543322110 000000 111 1224589999999
Q ss_pred EEEEeeCCC------------------------------------eEEEEEcCC---Ce--eeeeee------ccCCCeE
Q 015438 241 ELVAGSSDD------------------------------------CIYVYDLEA---NK--LSLRIL------AHTSDVN 273 (407)
Q Consensus 241 ~l~~~~~dg------------------------------------~i~i~d~~~---~~--~~~~~~------~~~~~v~ 273 (407)
.|+.++.|. .|++||+.+ ++ ....+. .+...+.
T Consensus 184 ~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 263 (740)
T 4a5s_A 184 FLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLC 263 (740)
T ss_dssp EEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEE
T ss_pred EEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEE
Confidence 998875321 588999988 73 223333 2677899
Q ss_pred EEEecCCCCCEEEEEeC----CCcEEEEeCcccCCCCc----e--eeee--ccccCCeE-----EEEecCCCCEEE-EEe
Q 015438 274 TVCFGDESGHLIYSGSD----DNLCKVWDRRCLNVKGK----P--AGVL--MGHLEGIT-----FIDSRGDGRYLI-SNG 335 (407)
Q Consensus 274 ~i~~s~~~~~~l~s~~~----d~~i~vwd~~~~~~~~~----~--~~~~--~~~~~~i~-----~~~~s~~~~~l~-s~~ 335 (407)
.++|+ +++++++.... +..|++||+. +++ + +..+ .+|...|. .+.|+|||+.|+ ..+
T Consensus 264 ~~~ws-pdg~~~~~~~~r~~~~~~i~~~d~~----tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s 338 (740)
T 4a5s_A 264 DVTWA-TQERISLQWLRRIQNYSVMDICDYD----ESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIIS 338 (740)
T ss_dssp EEEEE-ETTEEEEEEEESSTTEEEEEEEEEE----TTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEE
T ss_pred EEEEe-CCCeEEEEEeCCCCCEEEEEEEECC----CCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEE
Confidence 99999 67876665532 3479999997 444 1 2222 34555544 788999999877 665
Q ss_pred C-CC--cEEEEECCCCCCc
Q 015438 336 K-DQ--AIKLWDIRKMSSN 351 (407)
Q Consensus 336 ~-dg--~i~iwd~~~~~~~ 351 (407)
. +| .|.+||+...+..
T Consensus 339 ~~~G~~~l~~~~~~~~~~~ 357 (740)
T 4a5s_A 339 NEEGYRHICYFQIDKKDCT 357 (740)
T ss_dssp CTTSCEEEEEEETTCSSCE
T ss_pred cCCCceEEEEEECCCCceE
Confidence 3 44 5888898865543
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.72 E-value=5e-16 Score=153.30 Aligned_cols=220 Identities=12% Similarity=0.059 Sum_probs=146.8
Q ss_pred ceeeeeccCCCCcccccCCCceE---------EEEEC--CCCCE-EEEEeC-CCeEEEEEcC--C-CeEEeEeeecc--c
Q 015438 106 HMLSRYLPVNGPWPVDQTTSRAY---------VSQFS--ADGSL-FVAGFQ-ASQIRIYDVE--R-GWKIQKDILAK--S 167 (407)
Q Consensus 106 ~~~~~~~~~~~~~~~~~h~~~v~---------~~~~s--~~~~~-l~~~~~-dg~i~iwd~~--~-~~~~~~~~~~~--~ 167 (407)
..++..........+..|...+. ...|+ |||+. |+.++. +..|.++++. . +. ...+.... .
T Consensus 49 ~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~ 127 (662)
T 3azo_A 49 ATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVG 127 (662)
T ss_dssp EEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCST
T ss_pred EEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCC
Confidence 33444434444455556655555 55565 99998 776654 5667777765 2 32 22221111 1
Q ss_pred cceEEEEEEECCCCCeEEEEeCC----------CeEEEEECCC------CceeccccccccccceeeeecCCCCccccEE
Q 015438 168 LRWTVTDTSLSPDQRHLVYASMS----------PIVHIVDVGS------GTMESLANVTEIHDGLDFSAADDGGYSFGIF 231 (407)
Q Consensus 168 ~~~~v~~~~~sp~~~~l~~~~~d----------g~i~vwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 231 (407)
+...+..++|+|||+.|++++.+ ..|++||+.+ +....+.. . +...+.
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~--~--------------~~~~~~ 191 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSD--D--------------AHRFVT 191 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSC--S--------------CSSEEC
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEe--c--------------CCCccc
Confidence 55678999999999999998876 5899999987 44322210 0 122567
Q ss_pred EEEEeCCCCEEEEeeCC--------CeEEEEEcC-CC---eeeeeeeccCCCeEEEEecCCCCCEEEEEeCCC--cEEEE
Q 015438 232 SLKFSTDGRELVAGSSD--------DCIYVYDLE-AN---KLSLRILAHTSDVNTVCFGDESGHLIYSGSDDN--LCKVW 297 (407)
Q Consensus 232 ~~~~s~~~~~l~~~~~d--------g~i~i~d~~-~~---~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~--~i~vw 297 (407)
.++|+|||++|+.++.+ ..|++||+. ++ +.......+...+..+.|+ +++++++++..++ .|.+|
T Consensus 192 ~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~s-pdg~l~~~~~~~~~~~l~~~ 270 (662)
T 3azo_A 192 GPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWA-PDGSLIVATDRTGWWNLHRV 270 (662)
T ss_dssp CCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEEC-TTSCEEEEECTTSSCEEEEE
T ss_pred CceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEEC-CCCeEEEEECCCCCeEEEEE
Confidence 78999999999887755 379999998 56 4433344457889999998 7777888888888 56666
Q ss_pred eCcccCCCCceeeeeccccCC--------eEEEEecCCCCEEEEEeCCCcEEEE--ECCCC
Q 015438 298 DRRCLNVKGKPAGVLMGHLEG--------ITFIDSRGDGRYLISNGKDQAIKLW--DIRKM 348 (407)
Q Consensus 298 d~~~~~~~~~~~~~~~~~~~~--------i~~~~~s~~~~~l~s~~~dg~i~iw--d~~~~ 348 (407)
|+. .++.......+... +..++|+|+++++++++. +.++|| |+..+
T Consensus 271 ~~~----~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~ 326 (662)
T 3azo_A 271 DPA----TGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESG 326 (662)
T ss_dssp CTT----TCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTT
T ss_pred ECC----CCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCC
Confidence 664 34433333322221 567889999999999998 999999 54443
No 168
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.71 E-value=8.7e-17 Score=148.22 Aligned_cols=237 Identities=11% Similarity=0.004 Sum_probs=147.7
Q ss_pred ceEEEEECCCCCEEEEEeCC---CeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCc
Q 015438 126 RAYVSQFSADGSLFVAGFQA---SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGT 202 (407)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~ 202 (407)
.+..++|+|+|++|+.+... ..|.+||+.++.... . ..........+.|+||++.|+.++.++.|++||+.+++
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~-l--~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~ 113 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ-L--TEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLE 113 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE-C--CCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEE-e--ecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCC
Confidence 36678999999998877543 478899998874322 1 12222222237899999999999999999999998877
Q ss_pred eecccccccc--ccceeeeecCCCCcc--ccEEEEEEeCCCCEEEEe-----eCCCeEEEEEcCCCeeeeeeeccCCCeE
Q 015438 203 MESLANVTEI--HDGLDFSAADDGGYS--FGIFSLKFSTDGRELVAG-----SSDDCIYVYDLEANKLSLRILAHTSDVN 273 (407)
Q Consensus 203 ~~~~~~~~~~--~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~-----~~dg~i~i~d~~~~~~~~~~~~~~~~v~ 273 (407)
...+...... ..+..+.... .... .....+.|+|+++.++.+ ..+..|++||+.+++..... .+...+.
T Consensus 114 ~~~~~~~~~~~~~~g~~l~~~~-~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~ 191 (396)
T 3c5m_A 114 EQVIYTVDEEWKGYGTWVANSD-CTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLG 191 (396)
T ss_dssp EEEEEECCTTEEEEEEEEECTT-SSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEE
T ss_pred cEEEEecccccCCCCCEEEecc-CCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccc
Confidence 5443321110 0000000000 0000 000013578888877654 35678999999988765443 5677899
Q ss_pred EEEecCCCCCEEEEEeCC------CcEEEEeCcccCCCCceeeeeccc--cCCeEEEEecCCCCEEEEEeCC-----CcE
Q 015438 274 TVCFGDESGHLIYSGSDD------NLCKVWDRRCLNVKGKPAGVLMGH--LEGITFIDSRGDGRYLISNGKD-----QAI 340 (407)
Q Consensus 274 ~i~~s~~~~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~s~~~d-----g~i 340 (407)
.+.|+|.++..|+..+.+ ..|.+||+. .+. ...+..+ ...+..++|+|+|++|+.++.+ +.|
T Consensus 192 ~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~----~~~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l 266 (396)
T 3c5m_A 192 HPIYRPFDDSTVGFCHEGPHDLVDARMWLVNED----GSN-VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVI 266 (396)
T ss_dssp EEEEETTEEEEEEEEECSCSSSCSCCCEEEETT----SCC-CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEE
T ss_pred cceECCCCCCEEEEEecCCCCCCCceEEEEECC----CCc-eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceE
Confidence 999995367766665543 368888875 333 2333333 2357889999999988777643 449
Q ss_pred EEEECCCCCCcccccCCCccccccceeeeCCC-CCCccCC
Q 015438 341 KLWDIRKMSSNASCNLGFRSYEWDYRWMDYPP-QARDLKH 379 (407)
Q Consensus 341 ~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~ 379 (407)
.+||+.+++...... ... .. +.|+| ++++++.
T Consensus 267 ~~~d~~~g~~~~l~~--~~~----~~-~~~s~~dg~~l~~ 299 (396)
T 3c5m_A 267 YKANPETLENEEVMV--MPP----CS-HLMSNFDGSLMVG 299 (396)
T ss_dssp EEECTTTCCEEEEEE--CCS----EE-EEEECSSSSEEEE
T ss_pred EEEECCCCCeEEeee--CCC----CC-CCccCCCCceEEE
Confidence 999998765432111 111 12 67888 9887764
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.71 E-value=1.7e-15 Score=138.00 Aligned_cols=231 Identities=12% Similarity=0.083 Sum_probs=145.1
Q ss_pred EEEECCCCCEEEEEeC----------CCeEEEEEcCCCeEEeEeeeccc---cceEEEEEEECCCCCeEEEEeC--CCeE
Q 015438 129 VSQFSADGSLFVAGFQ----------ASQIRIYDVERGWKIQKDILAKS---LRWTVTDTSLSPDQRHLVYASM--SPIV 193 (407)
Q Consensus 129 ~~~~s~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~---~~~~v~~~~~sp~~~~l~~~~~--dg~i 193 (407)
.++|+|+|++++++.. ++.|.+||..+.+.+........ +......++++|++++|+++.. ++.|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 8999999999998862 56799999988766655443211 1123567899999999999874 5799
Q ss_pred EEEECCCCceecc-cccccccc------c-ee-eeecCCCCccccEEEEEEe---------------------------C
Q 015438 194 HIVDVGSGTMESL-ANVTEIHD------G-LD-FSAADDGGYSFGIFSLKFS---------------------------T 237 (407)
Q Consensus 194 ~vwd~~~~~~~~~-~~~~~~~~------~-~~-~~~~~~~~~~~~v~~~~~s---------------------------~ 237 (407)
.+||+.+++.... ........ + .. +....+ +.+..+.+. +
T Consensus 134 ~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~d----g~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGD----GGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPAL 209 (361)
T ss_dssp EEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETT----SSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEE
T ss_pred EEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCC----CcEEEEEECCCCcEeeeccccceEcCCCCceEEEecc
Confidence 9999998876544 33211100 0 00 000000 011111111 2
Q ss_pred CCCEEEEeeCCCeEEEEEcCCCee--eeeeec------c----CCCeEEEEecCCCCCEEEEEeC-----------CCcE
Q 015438 238 DGRELVAGSSDDCIYVYDLEANKL--SLRILA------H----TSDVNTVCFGDESGHLIYSGSD-----------DNLC 294 (407)
Q Consensus 238 ~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~------~----~~~v~~i~~s~~~~~~l~s~~~-----------d~~i 294 (407)
++..++..+.++.|+++|+..... +..+.. + ......++++ ++++.++++.. .+.|
T Consensus 210 ~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~-~dg~~lyv~~~~~~~~~~~~~~~~~v 288 (361)
T 2oiz_A 210 DKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLH-RASGRMYVFMHPDGKEGTHKFPAAEI 288 (361)
T ss_dssp CSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEE-TTTTEEEEEEESSCCTTCTTCCCSEE
T ss_pred cCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEe-cCCCeEEEEEccCCCcccccCCCceE
Confidence 333445555677888888865432 111110 0 1112236888 55555555432 3589
Q ss_pred EEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCC--CCcccccCCCccccccceeeeCCC
Q 015438 295 KVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKM--SSNASCNLGFRSYEWDYRWMDYPP 372 (407)
Q Consensus 295 ~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~v~~~~~~~ 372 (407)
.+||+. +.+.+..+..+. +.+++|+|||++|++++. +.|.+||+.++ +.+..+ .........+.++|
T Consensus 289 ~viD~~----t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i----~~~G~~P~~~~~~p 357 (361)
T 2oiz_A 289 WVMDTK----TKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTI----EGAAEASLQVQFHP 357 (361)
T ss_dssp EEEETT----TTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEE----TTSCSSEEEEEECC
T ss_pred EEEECC----CCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEe----ccCCCCcEEEEecC
Confidence 999998 888888888776 899999999999998887 99999999998 655432 11222334556666
Q ss_pred CCC
Q 015438 373 QAR 375 (407)
Q Consensus 373 ~~~ 375 (407)
+|+
T Consensus 358 ~G~ 360 (361)
T 2oiz_A 358 VGG 360 (361)
T ss_dssp CSC
T ss_pred CCC
Confidence 654
No 170
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.70 E-value=1.1e-14 Score=144.85 Aligned_cols=244 Identities=12% Similarity=0.075 Sum_probs=162.0
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCC-----eEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCe----
Q 015438 122 QTTSRAYVSQFSADGSLFVAGFQAS-----QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPI---- 192 (407)
Q Consensus 122 ~h~~~v~~~~~s~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~---- 192 (407)
+|...+..++|||||++||.+..++ .|++||+.++......... ..+..++|+||++.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~----~~~~~~~wspDg~~l~~~~~~~~~~~~ 197 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER----VKFSCMAWTHDGKGMFYNAYPQQDGKS 197 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE----ECSCCEEECTTSSEEEEEECCCCSSCC
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC----cccceEEEEeCCCEEEEEEECCccccc
Confidence 3555789999999999999776543 8999999998655432111 12567999999999999887765
Q ss_pred ------------EEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC-----CCeEEEEE
Q 015438 193 ------------VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-----DDCIYVYD 255 (407)
Q Consensus 193 ------------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----dg~i~i~d 255 (407)
|++|++.++......... ...+...+..+.|+|||++|+.++. +..|++||
T Consensus 198 ~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~------------~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d 265 (710)
T 2xdw_A 198 DGTETSTNLHQKLYYHVLGTDQSEDILCAE------------FPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCD 265 (710)
T ss_dssp SSSCCCCCCCCEEEEEETTSCGGGCEEEEC------------CTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEE
T ss_pred cccccccCCCCEEEEEECCCCcccceEEec------------cCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEE
Confidence 999999876532111100 1123335778999999999888764 56899999
Q ss_pred cCC------Ce-eeeeeeccCCCeEEEEecCCCCCEEEEEeCC----CcEEEEeCcccCCCCc--eeeeeccccC--CeE
Q 015438 256 LEA------NK-LSLRILAHTSDVNTVCFGDESGHLIYSGSDD----NLCKVWDRRCLNVKGK--PAGVLMGHLE--GIT 320 (407)
Q Consensus 256 ~~~------~~-~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d----~~i~vwd~~~~~~~~~--~~~~~~~~~~--~i~ 320 (407)
+.+ +. ....+..+...+.. .|+ +++..|+..+.. +.|.+||+. .+. ....+..|.. .+.
T Consensus 266 ~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s-~dg~~l~~~s~~~~~~~~l~~~d~~----~~~~~~~~~l~~~~~~~~~~ 339 (710)
T 2xdw_A 266 LQQESNGITGILKWVKLIDNFEGEYD-YVT-NEGTVFTFKTNRHSPNYRLINIDFT----DPEESKWKVLVPEHEKDVLE 339 (710)
T ss_dssp GGGSSSSSCSSCCCEEEECSSSSCEE-EEE-EETTEEEEEECTTCTTCEEEEEETT----SCCGGGCEEEECCCSSCEEE
T ss_pred CcccccccCCccceEEeeCCCCcEEE-EEe-ccCCEEEEEECCCCCCCEEEEEeCC----CCCcccceeccCCCCCCeEE
Confidence 986 43 35566666666655 476 566666555543 369999986 332 2344444544 578
Q ss_pred EEEecCCCCEEEEEeCCCc--EEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCC-----CCCcceEEEeCC
Q 015438 321 FIDSRGDGRYLISNGKDQA--IKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKH-----PCDQSVATYKGH 391 (407)
Q Consensus 321 ~~~~s~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-----~~~~~v~~~~gh 391 (407)
.++|++++.++++...|+. |.+||+.+++....+.. ....+..+.++|++..+.. .....+..|+..
T Consensus 340 ~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~----~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~ 413 (710)
T 2xdw_A 340 WVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPL----EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLT 413 (710)
T ss_dssp EEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECC----CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETT
T ss_pred EEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCC----CCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECC
Confidence 8999988888888888885 56677756654333221 2445667788888754431 123456666643
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.70 E-value=9.3e-16 Score=151.35 Aligned_cols=251 Identities=13% Similarity=0.097 Sum_probs=164.5
Q ss_pred cccccCCCceEEEEECCCCCEEEEE--eCCCeEEEEEcCCCeEEeEeeeccccceEEE---------EEEEC--CCCCe-
Q 015438 118 WPVDQTTSRAYVSQFSADGSLFVAG--FQASQIRIYDVERGWKIQKDILAKSLRWTVT---------DTSLS--PDQRH- 183 (407)
Q Consensus 118 ~~~~~h~~~v~~~~~s~~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~---------~~~~s--p~~~~- 183 (407)
..+.+|...+..++|++++-+++.. +.++...||....+.....+ ..+...+. ...|+ ||++.
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~ 93 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESA---LPAPWNVRNRVFEYSGFPWAGVPRPAGGPL 93 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEES---SCTTCCBCCCGGGTCCCCEEEECCSSSSCE
T ss_pred HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCccee---CCCCccccccccccCCccceeeeecCCCeE
Confidence 3466789999999999887666666 55788999986443333222 22323344 45555 99998
Q ss_pred EEEEeC-CCeEEEEECC--C-CceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCC----------C
Q 015438 184 LVYASM-SPIVHIVDVG--S-GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD----------D 249 (407)
Q Consensus 184 l~~~~~-dg~i~vwd~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----------g 249 (407)
|+.++. +..|.++++. . +....+.... ...+...+.+++|+|||+.|++++.+ .
T Consensus 94 la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~------------~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~ 161 (662)
T 3azo_A 94 LVFTHFGDQRLYAFEPDAPGGAVPRPLTPVS------------AVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRR 161 (662)
T ss_dssp EEEEBTTTCCEEEECTTSTTCCCCEECSCCC------------CSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEE
T ss_pred EEEEECCCCeEEEEcCCCCCCCCCEeccCCc------------cCCCCccccCcEECCCCCEEEEEEecccCCCCCCcee
Confidence 777654 5677777775 3 4332222110 00134468899999999999998876 5
Q ss_pred eEEEEEcCC------Ceeeeeee-ccCCCeEEEEecCCCCCEEEEEeCC--------CcEEEEeCcccCCCC---ceeee
Q 015438 250 CIYVYDLEA------NKLSLRIL-AHTSDVNTVCFGDESGHLIYSGSDD--------NLCKVWDRRCLNVKG---KPAGV 311 (407)
Q Consensus 250 ~i~i~d~~~------~~~~~~~~-~~~~~v~~i~~s~~~~~~l~s~~~d--------~~i~vwd~~~~~~~~---~~~~~ 311 (407)
.|++||+.+ ++. ..+. .+...+..++|| ++|++|+.++.+ ..|++||+.. .+ .....
T Consensus 162 ~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~S-pDG~~la~~~~~~~~~~~~~~~i~~~d~~~---~g~~~~~~~l 236 (662)
T 3azo_A 162 FLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLS-PDGRQAVWLAWDHPRMPWEGTELKTARVTE---DGRFADTRTL 236 (662)
T ss_dssp EEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEEC-TTSSEEEEEEECTTCCTTTCEEEEEEEECT---TSCEEEEEEE
T ss_pred EEEEEECCCCccccCCce-eEEEecCCCcccCceEC-CCCCEEEEEECCCCCCCCCCcEEEEEEECC---CCcccccEEe
Confidence 899999987 554 4555 556678889998 889988877754 3799999861 13 33333
Q ss_pred eccccCCeEEEEecCCCCEEEEEeCCC--cEEEEECCCCCCcccccC--CCcccccc--ceeeeCCCCCCccCCCCCcce
Q 015438 312 LMGHLEGITFIDSRGDGRYLISNGKDQ--AIKLWDIRKMSSNASCNL--GFRSYEWD--YRWMDYPPQARDLKHPCDQSV 385 (407)
Q Consensus 312 ~~~~~~~i~~~~~s~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~--~~~~~~~~--v~~~~~~~~~~~l~~~~~~~v 385 (407)
..+|...+..++|+|||+++++++.++ .|.+||+.+++....... ......|. +..++|+++++++.....+.+
T Consensus 237 ~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~ 316 (662)
T 3azo_A 237 LGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAA 316 (662)
T ss_dssp EEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSC
T ss_pred CCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCcc
Confidence 444567899999999999888888888 566666655543222111 11112232 467788888887765533555
Q ss_pred EEE
Q 015438 386 ATY 388 (407)
Q Consensus 386 ~~~ 388 (407)
++|
T Consensus 317 ~l~ 319 (662)
T 3azo_A 317 VLG 319 (662)
T ss_dssp EEE
T ss_pred EEE
Confidence 555
No 172
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.70 E-value=5.8e-15 Score=130.65 Aligned_cols=243 Identities=10% Similarity=0.076 Sum_probs=165.8
Q ss_pred CcccccCCCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEE
Q 015438 117 PWPVDQTTSRAYVSQFSADGS-LFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHI 195 (407)
Q Consensus 117 ~~~~~~h~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~v 195 (407)
...+..+.....+++|+|+|+ +++++..++.|..|+..++ ..... .+...+.+++++|+++++++...++.|.+
T Consensus 20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~---~~~~~~~~l~~~~dg~l~v~~~~~~~i~~ 94 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEM---HPSHHQNGHCLNKQGHLIACSHGLRRLER 94 (296)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEE---SSCSSEEEEEECTTCCEEEEETTTTEEEE
T ss_pred EEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEE---CCCCCcceeeECCCCcEEEEecCCCeEEE
Confidence 344555566788999999998 7778888999999999876 22221 23345889999999998877777789999
Q ss_pred EECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEE----ee-------------CCCeEEEEEcCC
Q 015438 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA----GS-------------SDDCIYVYDLEA 258 (407)
Q Consensus 196 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~----~~-------------~dg~i~i~d~~~ 258 (407)
||..+++.......... .....+..++++|+|+++++ |+ ..+.|+.++..
T Consensus 95 ~d~~~g~~~~~~~~~~~------------~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~- 161 (296)
T 3e5z_A 95 QREPGGEWESIADSFEG------------KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD- 161 (296)
T ss_dssp ECSTTCCEEEEECEETT------------EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-
T ss_pred EcCCCCcEEEEeeccCC------------CCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-
Confidence 99987765433211100 01124667999999998887 33 13467777765
Q ss_pred CeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCce---eeeeccccCCeEEEEecCCCCEEEEEe
Q 015438 259 NKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKP---AGVLMGHLEGITFIDSRGDGRYLISNG 335 (407)
Q Consensus 259 ~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~---~~~~~~~~~~i~~~~~s~~~~~l~s~~ 335 (407)
++. ..+..+......++|+ ++++++++.+.++.|.+||+.. .+.. ...+..+...+..++++++|+++++.
T Consensus 162 g~~-~~~~~~~~~~~gi~~s-~dg~~lv~~~~~~~i~~~~~~~---~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~- 235 (296)
T 3e5z_A 162 GTL-SAPIRDRVKPNGLAFL-PSGNLLVSDTGDNATHRYCLNA---RGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA- 235 (296)
T ss_dssp SCE-EEEECCCSSEEEEEEC-TTSCEEEEETTTTEEEEEEECS---SSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-
T ss_pred CCE-EEeecCCCCCccEEEC-CCCCEEEEeCCCCeEEEEEECC---CCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-
Confidence 443 3444566678899998 7888887777889999999851 2222 22233345567789999999977666
Q ss_pred CCCcEEEEECCCCCCcccccCCCccccccceeeeC-CCCCCccCCCCCcceEEEeC
Q 015438 336 KDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDY-PPQARDLKHPCDQSVATYKG 390 (407)
Q Consensus 336 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~~~v~~~~g 390 (407)
++.|.+||.. ++....+. .... +..+.| +|+++.|.++..+.+..++-
T Consensus 236 -~~~v~~~~~~-g~~~~~~~----~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~ 284 (296)
T 3e5z_A 236 -GDGVHVLTPD-GDELGRVL----TPQT-TSNLCFGGPEGRTLYMTVSTEFWSIET 284 (296)
T ss_dssp -TTEEEEECTT-SCEEEEEE----CSSC-CCEEEEESTTSCEEEEEETTEEEEEEC
T ss_pred -CCeEEEECCC-CCEEEEEE----CCCC-ceeEEEECCCCCEEEEEcCCeEEEEEc
Confidence 8899999986 44433321 1222 677788 68887666655555555544
No 173
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.69 E-value=1.8e-15 Score=138.09 Aligned_cols=206 Identities=12% Similarity=0.067 Sum_probs=138.4
Q ss_pred eEEEEECCCCCE--EEEEe-------------CCCeEEEEEcCC-CeEEeEeeec-cccceEEEEEEECCCCCeEEEEeC
Q 015438 127 AYVSQFSADGSL--FVAGF-------------QASQIRIYDVER-GWKIQKDILA-KSLRWTVTDTSLSPDQRHLVYASM 189 (407)
Q Consensus 127 v~~~~~s~~~~~--l~~~~-------------~dg~i~iwd~~~-~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~ 189 (407)
+.+++|+|+|++ ++++. .++.+.+|++.. +......... ..+...+.+++|+|+|++|+++..
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~ 164 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADL 164 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcC
Confidence 556899999995 44542 689999999974 5333222111 123346899999999998887764
Q ss_pred -CCeEEEEECC-CCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC-CCeEEEEEcC--CCeeee-
Q 015438 190 -SPIVHIVDVG-SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-DDCIYVYDLE--ANKLSL- 263 (407)
Q Consensus 190 -dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~i~d~~--~~~~~~- 263 (407)
++.|.+|++. +++......... ..+...+..++|+|+|++|++++. ++.|.+|++. +++...
T Consensus 165 ~~~~v~~~~~~~~g~~~~~~~~~~------------~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~ 232 (365)
T 1jof_A 165 TANKLWTHRKLASGEVELVGSVDA------------PDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYT 232 (365)
T ss_dssp TTTEEEEEEECTTSCEEEEEEEEC------------SSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEECCCCCEEEeeeEec------------CCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEc
Confidence 6799999998 665432211100 001235888999999999888765 6899999865 455321
Q ss_pred --eee---c----cCC------CeEEEE-ecCCCCCEEEEEeCC-C-----cEEEEeCcccCCCCceee---eeccccCC
Q 015438 264 --RIL---A----HTS------DVNTVC-FGDESGHLIYSGSDD-N-----LCKVWDRRCLNVKGKPAG---VLMGHLEG 318 (407)
Q Consensus 264 --~~~---~----~~~------~v~~i~-~s~~~~~~l~s~~~d-~-----~i~vwd~~~~~~~~~~~~---~~~~~~~~ 318 (407)
.+. . +.. .+..++ |+ +++++|+++..+ + .|.+|++.. .++... ....+...
T Consensus 233 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~s-pdG~~l~v~~~~~~~~~~~~i~v~~~~~---~g~~~~~~~~~~~~~~~ 308 (365)
T 1jof_A 233 HHSFPLIPPGIPDRDPETGKGLYRADVCALT-FSGKYMFASSRANKFELQGYIAGFKLRD---CGSIEKQLFLSPTPTSG 308 (365)
T ss_dssp EEEEESSCTTCCCBCTTTSSBSEEEEEEEEC-TTSSEEEEEEEESSTTSCCEEEEEEECT---TSCEEEEEEEEECSSCC
T ss_pred cceEEcCCCCcCCcccccccccccccEEEEC-CCCCEEEEECCCCCCCCCCeEEEEEECC---CCCEEEeeeeeecCCCC
Confidence 121 1 121 478999 98 788887776543 2 899999851 333332 13334455
Q ss_pred eEEEEecC---CCCEEEEEeCC-CcEEEEECCCC
Q 015438 319 ITFIDSRG---DGRYLISNGKD-QAIKLWDIRKM 348 (407)
Q Consensus 319 i~~~~~s~---~~~~l~s~~~d-g~i~iwd~~~~ 348 (407)
+..++|+| +|++|++++.+ +.|.+|++...
T Consensus 309 ~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 309 GHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred cccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 67889999 89999998864 89999998764
No 174
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.69 E-value=1.5e-15 Score=139.62 Aligned_cols=232 Identities=9% Similarity=0.027 Sum_probs=147.9
Q ss_pred ccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEE--EEECCCCCeEEEE---------
Q 015438 119 PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTD--TSLSPDQRHLVYA--------- 187 (407)
Q Consensus 119 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~--~~~sp~~~~l~~~--------- 187 (407)
...++...+..++|+|+|+.|+.++.++.|++||+.++...... .. +...+.. ..++|++++++..
T Consensus 75 lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~-~~--~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~ 151 (388)
T 3pe7_A 75 LTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVY-QV--PAEWVGYGTWVANSDCTKLVGIEIRREDWVP 151 (388)
T ss_dssp CCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEE-EC--CTTEEEEEEEEECTTSSEEEEEEEEGGGCCC
T ss_pred eeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeee-ec--hhhcccccceeECCCCCeeccccccCccccc
Confidence 34455555557789999999999999999999999988544322 22 2223333 3458999988743
Q ss_pred -------------eCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeC-CCCEEEEeeCC-----
Q 015438 188 -------------SMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSD----- 248 (407)
Q Consensus 188 -------------~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d----- 248 (407)
..+..|.+||+.+++...+.. +...+..+.|+| +|+.|+....+
T Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-----------------~~~~~~~~~~sp~dg~~l~~~~~~~~~~~ 214 (388)
T 3pe7_A 152 LTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ-----------------ENQWLGHPIYRPYDDSTVAFCHEGPHDLV 214 (388)
T ss_dssp CCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE-----------------ESSCEEEEEEETTEEEEEEEEECSCTTTS
T ss_pred ccccchhhhhhccCCcceEEEEECCCCceEEeec-----------------CCccccccEECCCCCCEEEEEEecCCCCC
Confidence 234689999999886544332 222578899999 99988877653
Q ss_pred -CeEEEEEcCCCeeeeeeeccC--CCeEEEEecCCCCCEEEEEe-CCC----cEEEEeCcccCCCCce--eeeeccccCC
Q 015438 249 -DCIYVYDLEANKLSLRILAHT--SDVNTVCFGDESGHLIYSGS-DDN----LCKVWDRRCLNVKGKP--AGVLMGHLEG 318 (407)
Q Consensus 249 -g~i~i~d~~~~~~~~~~~~~~--~~v~~i~~s~~~~~~l~s~~-~d~----~i~vwd~~~~~~~~~~--~~~~~~~~~~ 318 (407)
..|+++|+..++. ..+..+. ..+..+.|+ ++++.|+..+ .++ .|.+||+. .++. +..+.++...
T Consensus 215 ~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~~l~~~d~~----~g~~~~l~~~~~~~~~ 288 (388)
T 3pe7_A 215 DARMWLINEDGTNM-RKVKTHAEGESCTHEFWV-PDGSALVYVSYLKGSPDRFIYSADPE----TLENRQLTSMPACSHL 288 (388)
T ss_dssp SCSEEEEETTSCCC-EESCCCCTTEEEEEEEEC-TTSSCEEEEEEETTCCCEEEEEECTT----TCCEEEEEEECCEEEE
T ss_pred cceEEEEeCCCCce-EEeeeCCCCcccccceEC-CCCCEEEEEecCCCCCcceEEEEecC----CCceEEEEcCCCceee
Confidence 3788889876554 3343443 257788998 6777554433 222 39999997 4442 3333321110
Q ss_pred ---eEEEEecCCCCEEEEE---------eCCCcEEEEECCCCCCcccccCCCccccc---------cceeeeCCCCCCcc
Q 015438 319 ---ITFIDSRGDGRYLISN---------GKDQAIKLWDIRKMSSNASCNLGFRSYEW---------DYRWMDYPPQARDL 377 (407)
Q Consensus 319 ---i~~~~~s~~~~~l~s~---------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l 377 (407)
...++|+|||+.|+.. ..+..|.+||+.+++..... . ....| .+..+.|+|+++.|
T Consensus 289 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~-~--~~~~~~~~~~~~~~~~~~~~~spDg~~l 365 (388)
T 3pe7_A 289 MSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVA-R--HDTSWKVFEGDRQVTHPHPSFTPDDKQI 365 (388)
T ss_dssp EECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEE-E--CCCCCCCBTTBSSTTCCCCEECTTSSEE
T ss_pred eecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEec-c--ccCcccccccccccCCCCccCCCCCCEE
Confidence 1223699999988754 45678999999886542211 1 11111 35667889999766
Q ss_pred CC
Q 015438 378 KH 379 (407)
Q Consensus 378 ~~ 379 (407)
+.
T Consensus 366 ~~ 367 (388)
T 3pe7_A 366 LF 367 (388)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 175
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.68 E-value=3.5e-14 Score=124.90 Aligned_cols=202 Identities=13% Similarity=0.165 Sum_probs=145.2
Q ss_pred cCCCceEEEEE-CCCCCEEEEEeC-CCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECC
Q 015438 122 QTTSRAYVSQF-SADGSLFVAGFQ-ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVG 199 (407)
Q Consensus 122 ~h~~~v~~~~~-s~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~ 199 (407)
++...+.++++ .+++.++++... ++.|.+||. ++..+... ...+...+.+++++|+++++++...++.|.+||..
T Consensus 74 ~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~-~g~~~~~~--~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 150 (286)
T 1q7f_A 74 SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ-YGQFVRKF--GATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN 150 (286)
T ss_dssp TCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT-TSCEEEEE--CTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred ccccCceEEEEEcCCCeEEEEcCCCCCEEEEECC-CCcEEEEe--cCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC
Confidence 34567899999 577777766643 789999994 45444332 12233358899999999988887788999999965
Q ss_pred CCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeecc--CCCeEEEEe
Q 015438 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH--TSDVNTVCF 277 (407)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~v~~i~~ 277 (407)
. ........ .++...+..++++++|+++++...++.|++||.. ++.+..+..+ ...+..+++
T Consensus 151 g-~~~~~~~~--------------~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~ 214 (286)
T 1q7f_A 151 G-NVLHKFGC--------------SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGI 214 (286)
T ss_dssp S-CEEEEEEC--------------TTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEE
T ss_pred C-CEEEEeCC--------------CCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEE
Confidence 3 22211110 0122357899999999977777788999999985 5555555433 357889999
Q ss_pred cCCCCCEEEEEeCCC-cEEEEeCcccCCCCceeeeeccccC--CeEEEEecCCCCEEEEEeCCCcEEEEECCCCC
Q 015438 278 GDESGHLIYSGSDDN-LCKVWDRRCLNVKGKPAGVLMGHLE--GITFIDSRGDGRYLISNGKDQAIKLWDIRKMS 349 (407)
Q Consensus 278 s~~~~~~l~s~~~d~-~i~vwd~~~~~~~~~~~~~~~~~~~--~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 349 (407)
+ ++++++++...++ .|.+||. .++.+..+..+.. .+.+++++|+|+++++ +.|++|++|++....
T Consensus 215 d-~~G~l~v~~~~~~~~i~~~~~-----~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 215 N-SNGEILIADNHNNFNLTIFTQ-----DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp C-TTCCEEEEECSSSCEEEEECT-----TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCC
T ss_pred C-CCCCEEEEeCCCCEEEEEECC-----CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccccc
Confidence 7 7888888888776 9999996 4566666654433 4789999999987777 579999999987643
No 176
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.66 E-value=1.2e-14 Score=132.23 Aligned_cols=247 Identities=14% Similarity=0.019 Sum_probs=158.0
Q ss_pred CCCEEEEEe------CCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeC----------CCeEEEEEC
Q 015438 135 DGSLFVAGF------QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM----------SPIVHIVDV 198 (407)
Q Consensus 135 ~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~----------dg~i~vwd~ 198 (407)
+++++++.. .|+.|.+||..+++.+.... .+..+ .++|+|+++++++++. ++.|.+||+
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~---~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~ 88 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVP---TAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDA 88 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEE---CCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEET
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEec---CCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEEC
Confidence 555665543 36799999998886554322 22333 8999999999998863 678999999
Q ss_pred CCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC--CCeEEEEEcCCCeeeee-eeccCCCeEEE
Q 015438 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS--DDCIYVYDLEANKLSLR-ILAHTSDVNTV 275 (407)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~i~d~~~~~~~~~-~~~~~~~v~~i 275 (407)
.+.+............ .+......++++|+|++|+++.. ++.|.+||+.+++.+.. +.. .+ ...+
T Consensus 89 ~t~~~~~~i~~~~~~~----------~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~~-~~~v 156 (361)
T 2oiz_A 89 DKLTFEKEISLPPKRV----------QGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-AG-CWSV 156 (361)
T ss_dssp TTCCEEEEEEECTTBC----------CBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-TT-EEEE
T ss_pred cCCcEEEEEEcCcccc----------ccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-CC-ccee
Confidence 8877654443211000 01113456899999999998864 57899999999988777 532 22 2223
Q ss_pred EecCCCCCEEEEEeCCCcEEEEeCcccCCCCcee------------------------------------eeecc-----
Q 015438 276 CFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPA------------------------------------GVLMG----- 314 (407)
Q Consensus 276 ~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~------------------------------------~~~~~----- 314 (407)
.+.|.....+++.+.||.+.+|+... .++.. ..+.-
T Consensus 157 ~~~p~~~~~~~~~~~dg~~~~v~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~ 233 (361)
T 2oiz_A 157 IPQPNRPRSFMTICGDGGLLTINLGE---DGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEV 233 (361)
T ss_dssp EECTTSSSEEEEEETTSSEEEEEECT---TSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSC
T ss_pred EEcCCCCeeEEEECCCCcEEEEEECC---CCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCc
Confidence 44444445566666666666665531 01110 00000
Q ss_pred --------------c----cCCeEEEEecCCCCEEEEEeC-----------CCcEEEEECCCCCCcccccCCCccccccc
Q 015438 315 --------------H----LEGITFIDSRGDGRYLISNGK-----------DQAIKLWDIRKMSSNASCNLGFRSYEWDY 365 (407)
Q Consensus 315 --------------~----~~~i~~~~~s~~~~~l~s~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~v 365 (407)
+ ......++|+|+++.++++.. .+.|.+||+.+.+.+.++..+ . .
T Consensus 234 ~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~----~--p 307 (361)
T 2oiz_A 234 KVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR----D--A 307 (361)
T ss_dssp EEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT----T--C
T ss_pred eecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC----C--e
Confidence 0 011112688999887776543 348999999998877665322 1 7
Q ss_pred eeeeCCCCCCccCCCCCcceEEEeCCcc-----------ceeeEEEeeCCCCC
Q 015438 366 RWMDYPPQARDLKHPCDQSVATYKGHSV-----------LRTLIRCHFSPVYR 407 (407)
Q Consensus 366 ~~~~~~~~~~~l~~~~~~~v~~~~gh~~-----------~~~~~~~~fsp~~~ 407 (407)
..++|+|++++|.+++++.|.+|+..+. ...-..+.|+|+++
T Consensus 308 ~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 308 LSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp CEEEEETTTTEEEEECSSCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred eEEEECCCCCEEEEeCCCeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 7889999999888777799999975432 22335678888875
No 177
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.66 E-value=2.5e-14 Score=128.55 Aligned_cols=213 Identities=14% Similarity=0.092 Sum_probs=151.2
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCe-EEeEeeec------cccceEEEEEEECC-CCCeEEEEe-CCCeE
Q 015438 123 TTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGW-KIQKDILA------KSLRWTVTDTSLSP-DQRHLVYAS-MSPIV 193 (407)
Q Consensus 123 h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~------~~~~~~v~~~~~sp-~~~~l~~~~-~dg~i 193 (407)
+-.....++++|+|+++++...++.|++|+.+... .+...... ..+...+..++++| ++.++++.+ .++.|
T Consensus 89 ~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I 168 (329)
T 3fvz_A 89 LFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRI 168 (329)
T ss_dssp TCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEE
T ss_pred ccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeE
Confidence 44578899999999988888889999999986542 22221100 22333588999999 788777776 68999
Q ss_pred EEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCC-CCEEEEeeCCCeEEEEEcCCCeeeeeee--ccCC
Q 015438 194 HIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-GRELVAGSSDDCIYVYDLEANKLSLRIL--AHTS 270 (407)
Q Consensus 194 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~ 270 (407)
++|+. .+............. ....++-.....++++|+ +.++++...++.|++||..+++.+..+. .+..
T Consensus 169 ~~~~~-~g~~~~~~~~~g~~~------~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~ 241 (329)
T 3fvz_A 169 VQFSP-SGKFVTQWGEESSGS------SPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGR 241 (329)
T ss_dssp EEECT-TSCEEEEECEECCSS------SCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTT
T ss_pred EEEcC-CCCEEEEeccCCCCC------CCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCC
Confidence 99994 444333221110000 000122335789999998 7777777788999999999888887774 3556
Q ss_pred CeEEEEecCCCCCEEEEE-------eCCCcEEEEeCcccCCCCceeeee---ccccCCeEEEEecCCCCEEEEEeCCCcE
Q 015438 271 DVNTVCFGDESGHLIYSG-------SDDNLCKVWDRRCLNVKGKPAGVL---MGHLEGITFIDSRGDGRYLISNGKDQAI 340 (407)
Q Consensus 271 ~v~~i~~s~~~~~~l~s~-------~~d~~i~vwd~~~~~~~~~~~~~~---~~~~~~i~~~~~s~~~~~l~s~~~dg~i 340 (407)
.+..++++ + +..+++. ..+..|++||.. .++.+..+ .++...+..++++|+|..+++...++.|
T Consensus 242 ~~~~~~~~-p-g~~~~~~g~~~v~~~~~~~v~~~~~~----~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I 315 (329)
T 3fvz_A 242 NVFAISYI-P-GFLFAVNGKPYFGDQEPVQGFVMNFS----SGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTV 315 (329)
T ss_dssp CEEEEEEE-T-TEEEEEECCCCTTCSCCCCEEEEETT----TCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCE
T ss_pred Ccceeeec-C-CEEEEeCCCEEeccCCCcEEEEEEcC----CCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEE
Confidence 78899998 4 4333333 234589999987 77877776 3567779999999999888888899999
Q ss_pred EEEECCCC
Q 015438 341 KLWDIRKM 348 (407)
Q Consensus 341 ~iwd~~~~ 348 (407)
++|++...
T Consensus 316 ~~~~~~~~ 323 (329)
T 3fvz_A 316 WKFTLTEK 323 (329)
T ss_dssp EEEEEEEC
T ss_pred EEEeCCcc
Confidence 99998753
No 178
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.65 E-value=1.3e-13 Score=124.01 Aligned_cols=236 Identities=12% Similarity=0.090 Sum_probs=157.2
Q ss_pred ccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCC----CeEE
Q 015438 119 PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS----PIVH 194 (407)
Q Consensus 119 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d----g~i~ 194 (407)
.+..+...+.+++|+|+|++++++..++.|.+||..++...... . .+...+.+++|+|+++++++...+ +.|.
T Consensus 39 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~-~--~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~ 115 (333)
T 2dg1_A 39 EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF-V--SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIF 115 (333)
T ss_dssp EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE-E--CSSSSEEEEEECTTSCEEEEECTTSSSCCEEE
T ss_pred EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe-e--CCCCCcceEEECCCCcEEEEeCCCCCCCceEE
Confidence 34456667899999999998888888899999999877433221 1 233469999999999888777666 6899
Q ss_pred EEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC------CCeEEEEEcCCCeeeeeeecc
Q 015438 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS------DDCIYVYDLEANKLSLRILAH 268 (407)
Q Consensus 195 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~ 268 (407)
+||..++......... .....+.++.++|+|+++++... .+.|+.+|..+++... +...
T Consensus 116 ~~d~~~~~~~~~~~~~--------------~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~ 180 (333)
T 2dg1_A 116 AATENGDNLQDIIEDL--------------STAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQN 180 (333)
T ss_dssp EECTTSCSCEEEECSS--------------SSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEE
T ss_pred EEeCCCCEEEEEEccC--------------ccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecC
Confidence 9998877643221100 01236889999999987776553 3567777776555433 3233
Q ss_pred CCCeEEEEecCCCCCEE-EEEeCCCcEEEEeCcccCCCCceee--------eeccccCCeEEEEecCCCCEEEEEeCCCc
Q 015438 269 TSDVNTVCFGDESGHLI-YSGSDDNLCKVWDRRCLNVKGKPAG--------VLMGHLEGITFIDSRGDGRYLISNGKDQA 339 (407)
Q Consensus 269 ~~~v~~i~~s~~~~~~l-~s~~~d~~i~vwd~~~~~~~~~~~~--------~~~~~~~~i~~~~~s~~~~~l~s~~~dg~ 339 (407)
...+..++|+ ++++.| ++.+.++.|.+||+.. .+..+. .+.++ ..+..++++++|+++++...++.
T Consensus 181 ~~~~~~i~~~-~dg~~l~v~~~~~~~i~~~d~~~---~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~ 255 (333)
T 2dg1_A 181 ISVANGIALS-TDEKVLWVTETTANRLHRIALED---DGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGR 255 (333)
T ss_dssp ESSEEEEEEC-TTSSEEEEEEGGGTEEEEEEECT---TSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTE
T ss_pred CCcccceEEC-CCCCEEEEEeCCCCeEEEEEecC---CCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCE
Confidence 4567899998 677754 5555678999999852 122221 11222 35788999999998888888899
Q ss_pred EEEEECCCCCCcccccCCCc--cccccceeeeCCCCCCccC
Q 015438 340 IKLWDIRKMSSNASCNLGFR--SYEWDYRWMDYPPQARDLK 378 (407)
Q Consensus 340 i~iwd~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~ 378 (407)
|.+||.. ++....+..... .+...+..++|+|+++.|.
T Consensus 256 v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~ 295 (333)
T 2dg1_A 256 VLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLI 295 (333)
T ss_dssp EEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEE
T ss_pred EEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEE
Confidence 9999984 443333211110 0111466788888875443
No 179
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.64 E-value=5.7e-14 Score=122.32 Aligned_cols=238 Identities=9% Similarity=-0.005 Sum_probs=161.2
Q ss_pred ceEEEEECCCCCEEE-EEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCcee
Q 015438 126 RAYVSQFSADGSLFV-AGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTME 204 (407)
Q Consensus 126 ~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~ 204 (407)
...+++++++|++++ +...++.|.+|+..+..... . .......+.+++++++++++++.. ++.|.+||.......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~--~-~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV--L-PFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EE--C-CCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccce--E-eeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe
Confidence 678999999999777 44678899999976542211 1 112223477899999998666655 889999998765432
Q ss_pred ccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCE
Q 015438 205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHL 284 (407)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~ 284 (407)
.... .....+..++++++|+++++...++.|.+|+..+.............+..++++ +++++
T Consensus 101 ~~~~----------------~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~-~~g~l 163 (270)
T 1rwi_B 101 VLPF----------------DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVD-NSGNV 163 (270)
T ss_dssp ECCC----------------CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEEC-TTCCE
T ss_pred eeec----------------CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEe-CCCCE
Confidence 1110 011257899999999977777778899999876554433222333467889997 67888
Q ss_pred EEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCcccccc
Q 015438 285 IYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWD 364 (407)
Q Consensus 285 l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 364 (407)
+++...++.|.+||.. ..........+...+..++++++|+.+++...++.|.+||......... .......
T Consensus 164 ~v~~~~~~~i~~~~~~----~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~----~~~~~~~ 235 (270)
T 1rwi_B 164 YVTDTDNNRVVKLEAE----SNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVL----PFTGLNT 235 (270)
T ss_dssp EEEEGGGTEEEEECTT----TCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEEC----CCCSCSC
T ss_pred EEEECCCCEEEEEecC----CCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceee----ccCCCCC
Confidence 8777778899999986 3333332223336789999999998888777889999999876443221 1111234
Q ss_pred ceeeeCCCCCCccCCC-CCcceEEEeCCc
Q 015438 365 YRWMDYPPQARDLKHP-CDQSVATYKGHS 392 (407)
Q Consensus 365 v~~~~~~~~~~~l~~~-~~~~v~~~~gh~ 392 (407)
+..+.++++++++.+. .++.|.+|+-+.
T Consensus 236 p~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 236 PLAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp EEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred ceeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 6778899998866553 467888887654
No 180
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.63 E-value=2.3e-14 Score=142.05 Aligned_cols=244 Identities=11% Similarity=0.010 Sum_probs=156.3
Q ss_pred cCCCceEEEEECCCCCEEEEE-----eCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCe----
Q 015438 122 QTTSRAYVSQFSADGSLFVAG-----FQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPI---- 192 (407)
Q Consensus 122 ~h~~~v~~~~~s~~~~~l~~~-----~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~---- 192 (407)
+|...+..++|||||++||.+ +.+..|++||+.++..+.. ...... ....++|+||++.|+.++.+..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV-DVIEGG--KYATPKWTPDSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS-CCBSCC--TTCCCEECTTSSEEEEEECCCCTTSC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC-cccCcc--cccceEEecCCCEEEEEEecCCCCCc
Confidence 466679999999999999843 3346899999999854311 011111 1257899999999999988765
Q ss_pred ---------EEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCC----eEEEEEcCCC
Q 015438 193 ---------VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD----CIYVYDLEAN 259 (407)
Q Consensus 193 ---------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg----~i~i~d~~~~ 259 (407)
|++|++.++........ ...++...+..+.|+|||++|++++.++ .|++||..++
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~------------~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~ 262 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVH------------ERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK 262 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEE------------CCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS
T ss_pred cccCCCCCEEEEEECCCCchhceEEE------------ecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC
Confidence 99999987753211110 0112334688999999999988877666 7888876655
Q ss_pred eeeeeeeccCCCeEEEEecCCCCCEEEEEe---CCCcEEEEeCcccCCCCce--eeeeccc--cCCeEEEEecCCCCEEE
Q 015438 260 KLSLRILAHTSDVNTVCFGDESGHLIYSGS---DDNLCKVWDRRCLNVKGKP--AGVLMGH--LEGITFIDSRGDGRYLI 332 (407)
Q Consensus 260 ~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~---~d~~i~vwd~~~~~~~~~~--~~~~~~~--~~~i~~~~~s~~~~~l~ 332 (407)
+. ..+..+...+....++ .++ +++.+. .++.|.+||+. .+.. ...+..+ ...+..++|+ ++.+++
T Consensus 263 ~~-~~l~~~~~~~~~~~~~-~g~-l~~~s~~~~~~~~l~~~d~~----~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~ 334 (695)
T 2bkl_A 263 DF-RLLVKGVGAKYEVHAW-KDR-FYVLTDEGAPRQRVFEVDPA----KPARASWKEIVPEDSSASLLSVSIV-GGHLSL 334 (695)
T ss_dssp SC-EEEEECSSCCEEEEEE-TTE-EEEEECTTCTTCEEEEEBTT----BCSGGGCEEEECCCSSCEEEEEEEE-TTEEEE
T ss_pred ce-EEeecCCCceEEEEec-CCc-EEEEECCCCCCCEEEEEeCC----CCCccCCeEEecCCCCCeEEEEEEE-CCEEEE
Confidence 43 4455666667777774 444 555554 25789999986 3332 2333333 3457888888 677888
Q ss_pred EEeCCCcEEEEECC-CCCCcccccCCCccccccceeeeCCCCCCccCC-----CCCcceEEEeCC
Q 015438 333 SNGKDQAIKLWDIR-KMSSNASCNLGFRSYEWDYRWMDYPPQARDLKH-----PCDQSVATYKGH 391 (407)
Q Consensus 333 s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-----~~~~~v~~~~gh 391 (407)
+...|+..+||.+. .++....+.. .....+..+.++|++..+.. .....+..|+-.
T Consensus 335 ~~~~dg~~~l~~~~~~g~~~~~l~~---~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~ 396 (695)
T 2bkl_A 335 EYLKDATSEVRVATLKGKPVRTVQL---PGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVS 396 (695)
T ss_dssp EEEETTEEEEEEEETTCCEEEECCC---SSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETT
T ss_pred EEEECCEEEEEEEeCCCCeeEEecC---CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECC
Confidence 88999998888765 2332222111 11233556677887755442 122456666543
No 181
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.63 E-value=4.9e-14 Score=127.51 Aligned_cols=219 Identities=14% Similarity=0.100 Sum_probs=141.4
Q ss_pred CceEEEEECCCCCEEEEEeCC---C--eEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCC---------
Q 015438 125 SRAYVSQFSADGSLFVAGFQA---S--QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS--------- 190 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~d---g--~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d--------- 190 (407)
..+..++|||||++|+.++.+ + .|.+|++.++..... .. ... +..+.|+|+++.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l-~~---~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~ 133 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKI-LE---AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIF 133 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEE-EE---ESE-EEEEEECTTSSEEEEEEECCCC------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEE-Ec---CCC-ccceeECCCCCEEEEEEccCCCcCCcEE
Confidence 568899999999999987653 2 488889887743322 11 123 8899999999999987642
Q ss_pred ------------------CeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCC---
Q 015438 191 ------------------PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD--- 249 (407)
Q Consensus 191 ------------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--- 249 (407)
..|++||+.+++....+.. . .+..+.|+|+| +++++..++
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-----------------~-~~~~~~~spdg-~~~~~~~~~~~~ 194 (347)
T 2gop_A 134 EDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-----------------P-RFSSGIWHRDK-IVVNVPHREIIP 194 (347)
T ss_dssp ---CCCC---------CEEEEEEEETTTTEEEEEEEE-----------------E-TTCEEEEETTE-EEEEEECCCSSC
T ss_pred EcccceeecCcccccCccceEEEEECCCCeEEeeecC-----------------C-CcccccCCCCe-EEEEEecccccc
Confidence 5789999987765111110 0 35678999999 777775542
Q ss_pred ------eEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCC--------CcEEEEeCcccCCCCceeeeeccc
Q 015438 250 ------CIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDD--------NLCKVWDRRCLNVKGKPAGVLMGH 315 (407)
Q Consensus 250 ------~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d--------~~i~vwd~~~~~~~~~~~~~~~~~ 315 (407)
.|+++| +++. ..+..+ ..+..+ + ++|+.|+.++.+ ..|.+|| . ++......++
T Consensus 195 ~~~~~~~l~~~d--~~~~-~~l~~~-~~~~~~--s-pdg~~l~~~~~~~~~~~~~~~~l~~~d-~-----~~~~~l~~~~ 261 (347)
T 2gop_A 195 QYFKFWDIYIWE--DGKE-EKMFEK-VSFYAV--D-SDGERILLYGKPEKKYMSEHNKLYIYD-G-----KEVMGILDEV 261 (347)
T ss_dssp CSSCCEEEEEEE--TTEE-EEEEEE-ESEEEE--E-ECSSCEEEEECCSSSCCCSSCEEEEEC-S-----SCEEESSTTC
T ss_pred cccccccEEEeC--CCce-EEeccC-cceeeE--C-CCCCEEEEEEccccCCccccceEEEEC-C-----CceEeccccC
Confidence 455555 5554 344444 455544 6 677777766644 3677777 3 3334444556
Q ss_pred cCCeEE-EEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCCCCCcce-EEEe
Q 015438 316 LEGITF-IDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSV-ATYK 389 (407)
Q Consensus 316 ~~~i~~-~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v-~~~~ 389 (407)
...+.. +.|+ ++ ++++++.++.++|| +.+++. ... ......+..++++| .-+++...+... .+|.
T Consensus 262 ~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~-~~~----~~~~~~v~~~~~s~-~~~~~~~~~~~~~~l~~ 328 (347)
T 2gop_A 262 DRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI-KPI----AKGRHWIMGFDVDE-IVVYLKETATRLRELFT 328 (347)
T ss_dssp CSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE-EEE----ECSSSEEEEEEESS-SEEEEEECSSSCCEEEE
T ss_pred CcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce-EEE----ecCCCeEEeeeeeC-cEEEEEcCCCChHHheE
Confidence 677886 8999 88 88999999999999 884332 111 11244567778888 433333333332 4444
No 182
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.62 E-value=4.6e-15 Score=136.62 Aligned_cols=228 Identities=12% Similarity=0.070 Sum_probs=145.5
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEE-------------------EEECCCCCeEEEE--
Q 015438 129 VSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTD-------------------TSLSPDQRHLVYA-- 187 (407)
Q Consensus 129 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~-------------------~~~sp~~~~l~~~-- 187 (407)
.+.|+|+|++|+.++.++.|++||+.++..... ..... ..... +.|+|+++.++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~-~~~~~--~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 161 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVI-YTVDE--EWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEF 161 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEE-EECCT--TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEE-Eeccc--ccCCCCCEEEeccCCccccccccccccCCCCcceeeeee
Confidence 478999999999999999999999988753322 11111 11222 4678888887765
Q ss_pred ---eCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeC-CCCEEEEeeCC------CeEEEEEcC
Q 015438 188 ---SMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSD------DCIYVYDLE 257 (407)
Q Consensus 188 ---~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d------g~i~i~d~~ 257 (407)
..+..|.+||+.+++...+.. +...+..+.|+| +++.|+..+.+ ..|++||+.
T Consensus 162 ~~~~~~~~l~~~d~~~g~~~~~~~-----------------~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~ 224 (396)
T 3c5m_A 162 YHTNPTCRLIKVDIETGELEVIHQ-----------------DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNED 224 (396)
T ss_dssp HHTCCCEEEEEEETTTCCEEEEEE-----------------ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETT
T ss_pred ccCCCcceEEEEECCCCcEEeecc-----------------CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECC
Confidence 356689999998876543321 222578899999 78877766543 368999987
Q ss_pred CCeeeeeeecc--CCCeEEEEecCCCCCEEEEEeCC-----CcEEEEeCcccCCCCceeeeeccccCCeEEEEecC-CCC
Q 015438 258 ANKLSLRILAH--TSDVNTVCFGDESGHLIYSGSDD-----NLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRG-DGR 329 (407)
Q Consensus 258 ~~~~~~~~~~~--~~~v~~i~~s~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~ 329 (407)
.++... +..+ ...+..+.|+ ++++.|+.++.+ +.|++||+. .++...... .. ... +.|+| +|+
T Consensus 225 ~~~~~~-l~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~~l~~~d~~----~g~~~~l~~-~~-~~~-~~~s~~dg~ 295 (396)
T 3c5m_A 225 GSNVRK-IKEHAEGESCTHEFWI-PDGSAMAYVSYFKGQTDRVIYKANPE----TLENEEVMV-MP-PCS-HLMSNFDGS 295 (396)
T ss_dssp SCCCEE-SSCCCTTEEEEEEEEC-TTSSCEEEEEEETTTCCEEEEEECTT----TCCEEEEEE-CC-SEE-EEEECSSSS
T ss_pred CCceeE-eeccCCCccccceEEC-CCCCEEEEEecCCCCccceEEEEECC----CCCeEEeee-CC-CCC-CCccCCCCc
Confidence 665433 3233 2357889998 677766665443 449999997 444332221 11 233 88999 999
Q ss_pred EEEEEe----------------CCCcEEEEECCCCCCcccccCCCccccc---------cceeeeCCCCCCccCCC--CC
Q 015438 330 YLISNG----------------KDQAIKLWDIRKMSSNASCNLGFRSYEW---------DYRWMDYPPQARDLKHP--CD 382 (407)
Q Consensus 330 ~l~s~~----------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~--~~ 382 (407)
+|++++ .+..|.+||+.+++... +.. . ...+ ....+.|+|+++.|+.. .+
T Consensus 296 ~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-l~~-~-~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~ 372 (396)
T 3c5m_A 296 LMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQK-LCK-H-STSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFE 372 (396)
T ss_dssp EEEEEECCC----------CCCCCCEEEEEETTTTBCCE-EEE-C-CCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTT
T ss_pred eEEEecCCcceeeccccccccCCCCcEEEEecccCceEE-ccC-C-CCccccccccccCCCCCceEccCCCeEEEEecCC
Confidence 888765 34789999998765422 111 0 1111 24456789998766533 23
Q ss_pred cceEEE
Q 015438 383 QSVATY 388 (407)
Q Consensus 383 ~~v~~~ 388 (407)
+...+|
T Consensus 373 ~~~~l~ 378 (396)
T 3c5m_A 373 GVPAIY 378 (396)
T ss_dssp SSCEEE
T ss_pred CCceEE
Confidence 344444
No 183
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.62 E-value=1.7e-13 Score=119.70 Aligned_cols=216 Identities=11% Similarity=0.047 Sum_probs=155.7
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCceecccccccccc
Q 015438 135 DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHD 214 (407)
Q Consensus 135 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 214 (407)
.++.|++++.++.|.+||.++++.+....... ...+.++.++|+|++++ +.++.|..||. +++........
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~--~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~---- 74 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEK--GWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAP---- 74 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCT--TCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECC----
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCc--cCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCC----
Confidence 46789999999999999998997776644322 12477889999999888 45678999998 66654433221
Q ss_pred ceeeeecCCCCccccEEEEEEeCCCCEEEEeeC-CCeEEEEEcCCCeeeeeeec------cCCCeEEEEecCCCCCEEEE
Q 015438 215 GLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-DDCIYVYDLEANKLSLRILA------HTSDVNTVCFGDESGHLIYS 287 (407)
Q Consensus 215 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~------~~~~v~~i~~s~~~~~~l~s 287 (407)
....+.++.+.++|+++++.+. ++.|..+|. +++.+..+.. +......+++. ++++++++
T Consensus 75 -----------~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~-~~G~~lv~ 141 (276)
T 3no2_A 75 -----------AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKN-KKGNYLVP 141 (276)
T ss_dssp -----------TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEEC-TTSCEEEE
T ss_pred -----------CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceEC-CCCCEEEE
Confidence 1125778999999999998887 788888886 6776666542 11234456675 78999999
Q ss_pred EeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCC-Cc-cccccc
Q 015438 288 GSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLG-FR-SYEWDY 365 (407)
Q Consensus 288 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~-~~~~~v 365 (407)
...++.|..||. .++.+..+... ..+.++...++|+.+++++.++.|..+|..+++.+.++... .. .....+
T Consensus 142 ~~~~~~v~~~d~-----~G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~ 215 (276)
T 3no2_A 142 LFATSEVREIAP-----NGQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFV 215 (276)
T ss_dssp ETTTTEEEEECT-----TSCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEE
T ss_pred ecCCCEEEEECC-----CCCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCcccccc
Confidence 999999999998 57777777654 35567788899999999998889999999988887665321 11 112334
Q ss_pred eeeeCCCCCCccC
Q 015438 366 RWMDYPPQARDLK 378 (407)
Q Consensus 366 ~~~~~~~~~~~l~ 378 (407)
..++..+++.++.
T Consensus 216 ~~~~~~~~G~i~v 228 (276)
T 3no2_A 216 AQLFPLQNGGLYI 228 (276)
T ss_dssp EEEEECTTSCEEE
T ss_pred ccceEcCCCCEEE
Confidence 4555556665553
No 184
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.62 E-value=1.7e-13 Score=121.23 Aligned_cols=205 Identities=13% Similarity=0.081 Sum_probs=140.9
Q ss_pred CcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccc-cceEEEEEEECCCCCeEEE----Ee---
Q 015438 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKS-LRWTVTDTSLSPDQRHLVY----AS--- 188 (407)
Q Consensus 117 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~----~~--- 188 (407)
...+..+...+.+++++|+|+++++...++.|.+||..++........... ....+.+++++|+|+++++ |+
T Consensus 61 ~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~ 140 (296)
T 3e5z_A 61 LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKP 140 (296)
T ss_dssp EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCG
T ss_pred eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccc
Confidence 444556677899999999999888777778999999977743322111111 1123567999999998887 33
Q ss_pred ----------CCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcC-
Q 015438 189 ----------MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE- 257 (407)
Q Consensus 189 ----------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~- 257 (407)
..+.|..++.. +...... .+......++|+|+++.+++.+.++.|++||+.
T Consensus 141 ~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-----------------~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~ 202 (296)
T 3e5z_A 141 EEGYGGEMELPGRWVFRLAPD-GTLSAPI-----------------RDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNA 202 (296)
T ss_dssp GGSSCCCCCSSSCEEEEECTT-SCEEEEE-----------------CCCSSEEEEEECTTSCEEEEETTTTEEEEEEECS
T ss_pred cccccccccCCCcEEEEECCC-CCEEEee-----------------cCCCCCccEEECCCCCEEEEeCCCCeEEEEEECC
Confidence 13456666554 3322111 112246789999999988777788999999997
Q ss_pred CCee---eeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEe-cCCCCEEEE
Q 015438 258 ANKL---SLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDS-RGDGRYLIS 333 (407)
Q Consensus 258 ~~~~---~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~-s~~~~~l~s 333 (407)
+++. ...+..+...+..+++. ++|+++++. ++.|.+||. .++.+..+..+.. +++++| .|+++.|++
T Consensus 203 ~g~~~~~~~~~~~~~~~p~~i~~d-~~G~l~v~~--~~~v~~~~~-----~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v 273 (296)
T 3e5z_A 203 RGETEYQGVHFTVEPGKTDGLRVD-AGGLIWASA--GDGVHVLTP-----DGDELGRVLTPQT-TSNLCFGGPEGRTLYM 273 (296)
T ss_dssp SSCEEEEEEEECCSSSCCCSEEEB-TTSCEEEEE--TTEEEEECT-----TSCEEEEEECSSC-CCEEEEESTTSCEEEE
T ss_pred CCcCcCCCeEeeCCCCCCCeEEEC-CCCCEEEEc--CCeEEEECC-----CCCEEEEEECCCC-ceeEEEECCCCCEEEE
Confidence 4443 22333345567789997 788877666 789999997 4667777776666 899999 589998988
Q ss_pred EeCCCcEEEEECCCCC
Q 015438 334 NGKDQAIKLWDIRKMS 349 (407)
Q Consensus 334 ~~~dg~i~iwd~~~~~ 349 (407)
++.+ .+.-++.++.+
T Consensus 274 ~t~~-~l~~~~~~~~~ 288 (296)
T 3e5z_A 274 TVST-EFWSIETNVRG 288 (296)
T ss_dssp EETT-EEEEEECSCCB
T ss_pred EcCC-eEEEEEccccc
Confidence 8865 45555655543
No 185
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.61 E-value=3e-14 Score=128.18 Aligned_cols=253 Identities=9% Similarity=0.019 Sum_probs=166.1
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCcee
Q 015438 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTME 204 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~ 204 (407)
..|.+++|++++..++..+.++.++.|. +..... ...+...+.+++|+|++++++++..++.|.+||..+++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~ 79 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTIT---AEPWLE---ISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK 79 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEE---CEEEEE---EESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE
T ss_pred cccceeeecCCccceeEEeecccCcccc---cceeEE---EeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEE
Confidence 4567788999888777777788899992 322322 2223334789999999998888888999999999877654
Q ss_pred ccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCC----CeEEEEEcCCCeeeeeee--ccCCCeEEEEec
Q 015438 205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD----DCIYVYDLEANKLSLRIL--AHTSDVNTVCFG 278 (407)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~--~~~~~v~~i~~s 278 (407)
..... +...+.+++++|+|+++++...+ +.|.+||..+++....+. .+...+.+++++
T Consensus 80 ~~~~~----------------~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d 143 (333)
T 2dg1_A 80 RPFVS----------------HKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFD 143 (333)
T ss_dssp EEEEC----------------SSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEEC
T ss_pred EEeeC----------------CCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEEC
Confidence 32210 12368999999999987777666 689999998776543332 234578999997
Q ss_pred CCCCCEEEEEeC------CCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEE-EEeCCCcEEEEECCC-CCC
Q 015438 279 DESGHLIYSGSD------DNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLI-SNGKDQAIKLWDIRK-MSS 350 (407)
Q Consensus 279 ~~~~~~l~s~~~------d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-s~~~dg~i~iwd~~~-~~~ 350 (407)
++++++++... .+.|..+|.. .++ +..+......+..++|+|+|++|+ +.+.++.|.+||+++ +..
T Consensus 144 -~~g~l~v~~~~~~~~~~~~~l~~~~~~----~~~-~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~ 217 (333)
T 2dg1_A 144 -SKGGFYFTDFRGYSTNPLGGVYYVSPD----FRT-VTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVT 217 (333)
T ss_dssp -TTSCEEEEECCCBTTBCCEEEEEECTT----SCC-EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSS
T ss_pred -CCCCEEEEeccccccCCCceEEEEeCC----CCE-EEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcC
Confidence 67888776654 2456666654 223 223333445678999999998665 445688999999974 222
Q ss_pred ccccc----CCCccccccceeeeCCCCCCccCCC-CCcceEEEeCCccc--------e------eeEEEeeCCCC
Q 015438 351 NASCN----LGFRSYEWDYRWMDYPPQARDLKHP-CDQSVATYKGHSVL--------R------TLIRCHFSPVY 406 (407)
Q Consensus 351 ~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~v~~~~gh~~~--------~------~~~~~~fsp~~ 406 (407)
...+. ..... ...+..+.++++++++.+. .++.|.+|+-.... . .+..++|+||.
T Consensus 218 ~~~~~~~~~~~~~~-~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg 291 (333)
T 2dg1_A 218 IQPFGATIPYYFTG-HEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGT 291 (333)
T ss_dssp EEEEEEEEEEECCS-SSEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTS
T ss_pred cccccceEEEecCC-CCCCCceEECCCCCEEEEEcCCCEEEEECCCCCEEEEEEcCCCccccccCcceEEECCCC
Confidence 21110 00011 1345668889999877654 34667777542210 0 35667788875
No 186
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.60 E-value=7.9e-13 Score=126.62 Aligned_cols=230 Identities=15% Similarity=0.030 Sum_probs=157.0
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECC--CCceeccccccc
Q 015438 134 ADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVG--SGTMESLANVTE 211 (407)
Q Consensus 134 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~--~~~~~~~~~~~~ 211 (407)
|.+.++++...++.|.++|..+++.+..+.... .+..+.|+||++++++++.++.|.+||+. +.+........
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~----~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G- 239 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY----AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG- 239 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSS----CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC----CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-
Confidence 445567777778999999999986665543222 36689999999999999999999999995 55443322111
Q ss_pred cccceeeeecCCCCccccEEEEEEe----CCCCEEEEeeC-CCeEEEEEcCCCeeeeeeecc-----------CCCeEEE
Q 015438 212 IHDGLDFSAADDGGYSFGIFSLKFS----TDGRELVAGSS-DDCIYVYDLEANKLSLRILAH-----------TSDVNTV 275 (407)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~v~~~~~s----~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~-----------~~~v~~i 275 (407)
.....++|+ |+|+++++++. ++.|.++|..+.+.+..+... ...+..+
T Consensus 240 ----------------~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i 303 (567)
T 1qks_A 240 ----------------SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAI 303 (567)
T ss_dssp ----------------SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEE
T ss_pred ----------------CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEE
Confidence 135689999 69998887765 589999999999888776521 1257788
Q ss_pred EecCCCCCEEEEEeCCCcEEEEeCcccCCCCce--eeeeccccCCeEEEEecCCCCEEEEEe-CCCcEEEEECCCCCCcc
Q 015438 276 CFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKP--AGVLMGHLEGITFIDSRGDGRYLISNG-KDQAIKLWDIRKMSSNA 352 (407)
Q Consensus 276 ~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~--~~~~~~~~~~i~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~ 352 (407)
..++....+++....+|.|.++|.. ..+. +..+ ........+.|+|+|++|+++. .++.|.++|+.+++...
T Consensus 304 ~~s~~~~~~vv~~~~~g~v~~vd~~----~~~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~ 378 (567)
T 1qks_A 304 LASHYRPEFIVNVKETGKILLVDYT----DLNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVA 378 (567)
T ss_dssp EECSSSSEEEEEETTTTEEEEEETT----CSSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred EEcCCCCEEEEEecCCCeEEEEecC----CCccceeeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEE
Confidence 8885555566666677999999986 3222 2222 2234567889999999987765 68899999999987665
Q ss_pred cccC-CCcccc-ccceeeeCCCC-CCccCCC--CCcceEEEeCC
Q 015438 353 SCNL-GFRSYE-WDYRWMDYPPQ-ARDLKHP--CDQSVATYKGH 391 (407)
Q Consensus 353 ~~~~-~~~~~~-~~v~~~~~~~~-~~~l~~~--~~~~v~~~~gh 391 (407)
.... +...+. ....+ ++|+ +++++.+ .++.|.+++..
T Consensus 379 ~i~vgg~~Phpg~g~~~--~~p~~g~v~~t~~~g~~~Vsvid~~ 420 (567)
T 1qks_A 379 IEDTGGQTPHPGRGANF--VHPTFGPVWATSHMGDDSVALIGTD 420 (567)
T ss_dssp EEECSSSSBCCTTCEEE--EETTTEEEEEEEBSSSSEEEEEECC
T ss_pred EEeccCcCCCCccceee--ECCCCCcEEEeCCCCCCeEEEecCC
Confidence 5433 221111 11121 4565 5555433 35677777644
No 187
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.59 E-value=1.5e-13 Score=124.31 Aligned_cols=216 Identities=13% Similarity=0.159 Sum_probs=141.8
Q ss_pred CceEEEEECCCCCEEEEEe---------CCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCC---C-
Q 015438 125 SRAYVSQFSADGSLFVAGF---------QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS---P- 191 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d---g- 191 (407)
..+..+++ ||++++... .++.|.+||+.++... .+ ..+..+.|+|||++|+.++.+ +
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l-------~~~~~~~~SpDg~~la~~~~~~~~~~ 84 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI-------ENATMPRISPDGKKIAFMRANEEKKV 84 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE-------ESCEEEEECTTSSEEEEEEEETTTTE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec-------ccCCCeEECCCCCEEEEEEeccCCCc
Confidence 35667778 898887652 2567999999887432 21 247889999999999987653 3
Q ss_pred -eEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCC----------------------
Q 015438 192 -IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD---------------------- 248 (407)
Q Consensus 192 -~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---------------------- 248 (407)
.|.+|++.+++...+.. ... +..+.|+|+|+.|+.++.+
T Consensus 85 ~~l~~~~~~~g~~~~l~~-----------------~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 146 (347)
T 2gop_A 85 SEIWVADLETLSSKKILE-----------------AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGF 146 (347)
T ss_dssp EEEEEEETTTTEEEEEEE-----------------ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC------
T ss_pred ceEEEEECCCCceEEEEc-----------------CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCccc
Confidence 48888888776543321 112 7889999999988887642
Q ss_pred -----CeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCC-------cEEEEeCcccCCCCceeeeecccc
Q 015438 249 -----DCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDN-------LCKVWDRRCLNVKGKPAGVLMGHL 316 (407)
Q Consensus 249 -----g~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~-------~i~vwd~~~~~~~~~~~~~~~~~~ 316 (407)
..|++||+.+++.+..+.. . .+..+.|+ +++ +++++..+. ...+|.+. .++. ..+..+
T Consensus 147 ~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~s-pdg-~~~~~~~~~~~~~~~~~~~l~~~d----~~~~-~~l~~~- 216 (347)
T 2gop_A 147 FDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWH-RDK-IVVNVPHREIIPQYFKFWDIYIWE----DGKE-EKMFEK- 216 (347)
T ss_dssp ---CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEE-TTE-EEEEEECCCSSCCSSCCEEEEEEE----TTEE-EEEEEE-
T ss_pred ccCccceEEEEECCCCeEEeeecC-C-CcccccCC-CCe-EEEEEecccccccccccccEEEeC----CCce-EEeccC-
Confidence 5799999998887455555 4 78899998 677 777776542 44566554 2332 333334
Q ss_pred CCeEEEEecCCCCEEEEEeCC--------CcEEEEECCCCCCcccccCCCcccccccee-eeCCCCCCccCC-CCCcceE
Q 015438 317 EGITFIDSRGDGRYLISNGKD--------QAIKLWDIRKMSSNASCNLGFRSYEWDYRW-MDYPPQARDLKH-PCDQSVA 386 (407)
Q Consensus 317 ~~i~~~~~s~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~-~~~~~v~ 386 (407)
..+..+ +|+|++|+.++.+ ..|.+|| +++. ..+ ...+...+.. +.|+ ++ ++.. ..++.++
T Consensus 217 ~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~-~~l---~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~ 286 (347)
T 2gop_A 217 VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEV-MGI---LDEVDRGVGQAKIKD-GK-VYFTLFEEGSVN 286 (347)
T ss_dssp ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCE-EES---STTCCSEEEEEEEET-TE-EEEEEEETTEEE
T ss_pred cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCce-Eec---cccCCcccCCccEEc-Cc-EEEEEecCCcEE
Confidence 455544 9999999887754 3677888 3332 111 1223345554 7778 77 5443 4455566
Q ss_pred EE
Q 015438 387 TY 388 (407)
Q Consensus 387 ~~ 388 (407)
+|
T Consensus 287 l~ 288 (347)
T 2gop_A 287 LY 288 (347)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 188
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.59 E-value=1.2e-12 Score=117.60 Aligned_cols=241 Identities=9% Similarity=-0.034 Sum_probs=161.6
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCcee
Q 015438 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTME 204 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~ 204 (407)
.....+.+. +++.+++...++.|.+||..+++.+..... ......++++++++.+++...++.|.+||..+++..
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~----~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~ 118 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG----FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEIT 118 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC----CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEE
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC----CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEE
Confidence 345777774 355666666689999999999876655421 234788999999855444448899999999988765
Q ss_pred ccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEee--CCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCC
Q 015438 205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS--SDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESG 282 (407)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~ 282 (407)
........ .+.......+++ ++..|+++. .++.|.++|+.+++.+..+... .....+.++ +++
T Consensus 119 ~~i~~g~~-----------~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~-~dG 183 (328)
T 3dsm_A 119 GYIECPDM-----------DMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMD-KYN 183 (328)
T ss_dssp EEEECTTC-----------CTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEEC-TTS
T ss_pred EEEEcCCc-----------cccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEc-CCC
Confidence 43322110 001112334666 344555554 4889999999999988777643 345678887 778
Q ss_pred CEEEEEeCC----------CcEEEEeCcccCCCCceeeeeccc-cCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCc
Q 015438 283 HLIYSGSDD----------NLCKVWDRRCLNVKGKPAGVLMGH-LEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSN 351 (407)
Q Consensus 283 ~~l~s~~~d----------~~i~vwd~~~~~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 351 (407)
++++++..+ +.|.++|.. +++....+... ...+..++|+|+++.|+++.. .|.+||+.+.+..
T Consensus 184 ~l~v~~~~~~~~~~~~~~~~~v~~id~~----t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 184 KMWTITDGGYEGSPYGYEAPSLYRIDAE----TFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVP 257 (328)
T ss_dssp EEEEEBCCBCTTCSSCBCCCEEEEEETT----TTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCC
T ss_pred CEEEEECCCccCCccccCCceEEEEECC----CCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCcee
Confidence 877776654 789999997 66666555422 236789999999999888765 8999999887753
Q ss_pred ccccCCCccccccceeeeCCC-CCCccCCC-----CCcceEEEeCCcc
Q 015438 352 ASCNLGFRSYEWDYRWMDYPP-QARDLKHP-----CDQSVATYKGHSV 393 (407)
Q Consensus 352 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~-----~~~~v~~~~gh~~ 393 (407)
.... ..........++++| +++++.+. .++.|.+|+....
T Consensus 258 ~~~~--~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~ 303 (328)
T 3dsm_A 258 VRPF--LEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGK 303 (328)
T ss_dssp SSCS--BCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCC
T ss_pred eeee--ecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCC
Confidence 2111 111134456788998 45555543 4678899986543
No 189
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.59 E-value=2.5e-12 Score=123.13 Aligned_cols=263 Identities=11% Similarity=0.101 Sum_probs=171.6
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcC--CCeEEeEeeeccccceEEEEEEEC----CCCCeEEEEe-CCCeEEEE
Q 015438 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVE--RGWKIQKDILAKSLRWTVTDTSLS----PDQRHLVYAS-MSPIVHIV 196 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~v~~~~~s----p~~~~l~~~~-~dg~i~vw 196 (407)
...+..+.|+|||+++++++.++.|.+||+. +.+.+...... .....++|+ |||+++++++ .++.|.|+
T Consensus 196 g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G----~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~Vi 271 (567)
T 1qks_A 196 GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG----SEARSIETSKMEGWEDKYAIAGAYWPPQYVIM 271 (567)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC----SEEEEEEECCSTTCTTTEEEEEEEETTEEEEE
T ss_pred CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC----CCCceeEEccccCCCCCEEEEEEccCCeEEEE
Confidence 3467799999999999999999999999995 66554433221 236789999 6999988876 45899999
Q ss_pred ECCCCceeccccccccc--------c----ce---------eeeecCCCC-------------------ccccEEEEEEe
Q 015438 197 DVGSGTMESLANVTEIH--------D----GL---------DFSAADDGG-------------------YSFGIFSLKFS 236 (407)
Q Consensus 197 d~~~~~~~~~~~~~~~~--------~----~~---------~~~~~~~~~-------------------~~~~v~~~~~s 236 (407)
|..+.+........... . .+ .+.. ...+ ......++.|+
T Consensus 272 D~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~-~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~ 350 (567)
T 1qks_A 272 DGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV-KETGKILLVDYTDLNNLKTTEISAERFLHDGGLD 350 (567)
T ss_dssp ETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE-TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEEC
T ss_pred ECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe-cCCCeEEEEecCCCccceeeeeeccccccCceEC
Confidence 99888776544332110 0 00 0000 0000 01123467899
Q ss_pred CCCCEEEEee-CCCeEEEEEcCCCeeeeeeec-----cCCCeEEEEecCCCCCEEEEEe-CCCcEEEEeCcccC---CCC
Q 015438 237 TDGRELVAGS-SDDCIYVYDLEANKLSLRILA-----HTSDVNTVCFGDESGHLIYSGS-DDNLCKVWDRRCLN---VKG 306 (407)
Q Consensus 237 ~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~-----~~~~v~~i~~s~~~~~~l~s~~-~d~~i~vwd~~~~~---~~~ 306 (407)
|+|++++++. .++.|.++|+.+++.+..+.. |.+.-..+ ++|..+.+++++. .++.|.++|....+ ...
T Consensus 351 pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~ 429 (567)
T 1qks_A 351 GSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAW 429 (567)
T ss_dssp TTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBT
T ss_pred CCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccC
Confidence 9999887665 578899999999988766654 32222222 4533455666654 46899999987211 015
Q ss_pred ceeeeeccccCCeEEEEecCCCCEEEEEeC-------CCcEEEEECCCC-----CCcccccC-----CCccccccceeee
Q 015438 307 KPAGVLMGHLEGITFIDSRGDGRYLISNGK-------DQAIKLWDIRKM-----SSNASCNL-----GFRSYEWDYRWMD 369 (407)
Q Consensus 307 ~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~-------dg~i~iwd~~~~-----~~~~~~~~-----~~~~~~~~v~~~~ 369 (407)
+.+..+......-..+..+|++++|.+... .++|.++|+.+. ........ ......-.+..+.
T Consensus 430 kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (567)
T 1qks_A 430 KILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGE 509 (567)
T ss_dssp SEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEE
T ss_pred EEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeee
Confidence 566777655444456789999999988763 469999999987 22111110 1111233567789
Q ss_pred CCCCCCccCCC------CCcceEEEeCCc
Q 015438 370 YPPQARDLKHP------CDQSVATYKGHS 392 (407)
Q Consensus 370 ~~~~~~~l~~~------~~~~v~~~~gh~ 392 (407)
|+++|+.+.++ .++.|.+++..+
T Consensus 510 ~~~~G~~~~~s~~~~~~~~~~i~v~D~~t 538 (567)
T 1qks_A 510 FNKDGTEVWFSVWNGKDQESALVVVDDKT 538 (567)
T ss_dssp ECTTSSEEEEEEECCTTSCCEEEEEETTT
T ss_pred ECCCCCEEEEEeecCCCCCCcEEEEECCC
Confidence 99999877654 257888888766
No 190
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.57 E-value=6.6e-13 Score=115.49 Aligned_cols=202 Identities=9% Similarity=0.019 Sum_probs=144.2
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCce
Q 015438 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM 203 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~ 203 (407)
...+.+++++++|+++++.. ++.|.+||....... .. .......+..++++|+++++++...++.|.+|+..+...
T Consensus 66 ~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~--~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~ 141 (270)
T 1rwi_B 66 LYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VL--PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ 141 (270)
T ss_dssp CCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-EC--CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC
T ss_pred cCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-ee--ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee
Confidence 35678999999999666665 889999998765321 11 111223588999999999777777788999997654432
Q ss_pred eccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCC
Q 015438 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGH 283 (407)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~ 283 (407)
..... .....+.+++++++|+++++...++.|.+||............+...+..+++. ++++
T Consensus 142 ~~~~~----------------~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d-~~g~ 204 (270)
T 1rwi_B 142 TVLPF----------------TGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVD-EAGT 204 (270)
T ss_dssp EECCC----------------CSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEEC-TTCC
T ss_pred Eeecc----------------ccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEEC-CCCC
Confidence 11100 011246779999999977777678899999998766544333334678899997 7788
Q ss_pred EEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCC
Q 015438 284 LIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSS 350 (407)
Q Consensus 284 ~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 350 (407)
++++...++.|.+||.. ..........+...+.+++++++|+.+++...++.|+++++...+.
T Consensus 205 l~v~~~~~~~v~~~~~~----~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 205 VYVTEHNTNQVVKLLAG----STTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp EEEEETTTSCEEEECTT----CSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred EEEEECCCCcEEEEcCC----CCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 88887788899999985 3222222223345789999999999888888999999999887554
No 191
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.57 E-value=6e-12 Score=110.96 Aligned_cols=239 Identities=9% Similarity=0.036 Sum_probs=164.6
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCC
Q 015438 122 QTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSG 201 (407)
Q Consensus 122 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~ 201 (407)
.+...+.+++++++|+.+++...++.|.+||.. +... ... .......+.++++++++.++++...++.|..|+.. +
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~-~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 87 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKIT-EYP-LPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G 87 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE-EEE-CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeE-Eec-CCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence 345679999999999988877667899999988 5322 211 12233468899999999988877778899999976 3
Q ss_pred ceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeee-eeccCCCeEEEEecCC
Q 015438 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLR-ILAHTSDVNTVCFGDE 280 (407)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~v~~i~~s~~ 280 (407)
.... .... .....+..++++++|+++++...++.|.+||. +++.... +......+..+++. +
T Consensus 88 ~~~~-~~~~--------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~-~ 150 (299)
T 2z2n_A 88 IIKE-YTLP--------------NPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLG-S 150 (299)
T ss_dssp CEEE-EECS--------------STTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEEC-T
T ss_pred cEEE-EeCC--------------CcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEc-C
Confidence 2211 1100 01225788999999988777777889999998 5544322 22344568899996 7
Q ss_pred CCCEEEEEeCCCcEEEEeCcccCCCCceee-eeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCc
Q 015438 281 SGHLIYSGSDDNLCKVWDRRCLNVKGKPAG-VLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFR 359 (407)
Q Consensus 281 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~-~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 359 (407)
+++++++...++.|..||.. ++... ........+..++++++|+++++...++.|.+||. +++... +. ..
T Consensus 151 ~g~l~v~~~~~~~i~~~~~~-----g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~--~~ 221 (299)
T 2z2n_A 151 DNALWFTENQNNAIGRITES-----GDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE-FK--IP 221 (299)
T ss_dssp TSCEEEEETTTTEEEEECTT-----CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EE--CS
T ss_pred CCCEEEEeCCCCEEEEEcCC-----CcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE-EE--CC
Confidence 78888777777899999973 23222 12334456889999999998777777889999998 544221 11 11
Q ss_pred cccccceeeeCCCCCCccCCC-CCcceEEEeC
Q 015438 360 SYEWDYRWMDYPPQARDLKHP-CDQSVATYKG 390 (407)
Q Consensus 360 ~~~~~v~~~~~~~~~~~l~~~-~~~~v~~~~g 390 (407)
.....+..+.++++++++.+. .++.|..|+-
T Consensus 222 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 222 TPNARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp STTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred CCCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 223456788899998877654 4566777764
No 192
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.56 E-value=5e-13 Score=133.46 Aligned_cols=242 Identities=13% Similarity=0.079 Sum_probs=153.5
Q ss_pred CCCceEEEEECCCCCEEEEEeCC-----CeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCe-----
Q 015438 123 TTSRAYVSQFSADGSLFVAGFQA-----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPI----- 192 (407)
Q Consensus 123 h~~~v~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~----- 192 (407)
|...+..++|||||++||.+..+ ..|++||+.++..+.... +...+..++|+|| +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~----~~~~~~~~~wspD-~~l~~~~~~~~~~~~~ 235 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL----KWVKFSGLAWLGN-DALLYSRFAEPKEGQA 235 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE----EEEESCCCEESTT-SEEEEEECCCC-----
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC----CCceeccEEEECC-CEEEEEEecCcccccc
Confidence 44578899999999999887653 369999999986543211 1112357899999 99998876553
Q ss_pred ---------EEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCC-----eEEEEEcCC
Q 015438 193 ---------VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD-----CIYVYDLEA 258 (407)
Q Consensus 193 ---------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i~i~d~~~ 258 (407)
|++|++.++......... ...+...+..+.|+|||++|+..+.++ .|++||+.+
T Consensus 236 ~~~~~~~~~v~~~~lgt~~~~~~lv~~------------~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~ 303 (741)
T 1yr2_A 236 FQALNYNQTVWLHRLGTPQSADQPVFA------------TPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTN 303 (741)
T ss_dssp ---CCCCCEEEEEETTSCGGGCEEEEC------------CTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEET
T ss_pred cccCCCCCEEEEEECCCCchhCEEEec------------cCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCC
Confidence 889998766532111100 112223478899999999888877543 899999987
Q ss_pred C--eeeeeeeccCCCeEEEEecCCCCCEEEEEeCC----CcEEEEeCcccCCCC--ceeeeeccccCCeEEEEecCCCCE
Q 015438 259 N--KLSLRILAHTSDVNTVCFGDESGHLIYSGSDD----NLCKVWDRRCLNVKG--KPAGVLMGHLEGITFIDSRGDGRY 330 (407)
Q Consensus 259 ~--~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d----~~i~vwd~~~~~~~~--~~~~~~~~~~~~i~~~~~s~~~~~ 330 (407)
+ ++...+..+...+....+ ++++.|+..+.+ +.|.+||+. .+ .....+..+...+..++|+ ++.+
T Consensus 304 ~~~~~~~~l~~~~~~~~~~~~--~dg~~l~~~s~~~~~~~~l~~~d~~----~~~~~~~~l~~~~~~~l~~~~~~-~~~l 376 (741)
T 1yr2_A 304 GKIGPVTALIPDLKAQWDFVD--GVGDQLWFVSGDGAPLKKIVRVDLS----GSTPRFDTVVPESKDNLESVGIA-GNRL 376 (741)
T ss_dssp TEECCCEEEECSSSSCEEEEE--EETTEEEEEECTTCTTCEEEEEECS----SSSCEEEEEECCCSSEEEEEEEE-BTEE
T ss_pred CCCcccEEecCCCCceEEEEe--ccCCEEEEEECCCCCCCEEEEEeCC----CCccccEEEecCCCCeEEEEEEE-CCEE
Confidence 7 314556556555555544 566777666653 459999986 32 2333344444456677887 5677
Q ss_pred EEEEeCCCcEEEEECC-CCCCcccccCCCccccccceeeeCCCCCCccCC-----CCCcceEEEeCC
Q 015438 331 LISNGKDQAIKLWDIR-KMSSNASCNLGFRSYEWDYRWMDYPPQARDLKH-----PCDQSVATYKGH 391 (407)
Q Consensus 331 l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-----~~~~~v~~~~gh 391 (407)
+++...|+..+||.++ .++....+.. .....+..+.++|++..+.. .....+..|+-.
T Consensus 377 v~~~~~dg~~~l~~~~~~g~~~~~l~~---~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~ 440 (741)
T 1yr2_A 377 FASYIHDAKSQVLAFDLDGKPAGAVSL---PGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPA 440 (741)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEECBC---SSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETT
T ss_pred EEEEEECCEEEEEEEeCCCCceeeccC---CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECC
Confidence 8888889988887665 2332222211 11334567788888765542 223556666643
No 193
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.55 E-value=3.1e-12 Score=113.79 Aligned_cols=246 Identities=16% Similarity=0.173 Sum_probs=159.3
Q ss_pred CCceEEEEECCCCCEEEE-------EeCCCeEEEEEcCCCeEEeEee-eccccceEEEEEEECCC-CCeEEEEeCCCeEE
Q 015438 124 TSRAYVSQFSADGSLFVA-------GFQASQIRIYDVERGWKIQKDI-LAKSLRWTVTDTSLSPD-QRHLVYASMSPIVH 194 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~-------~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~v~~~~~sp~-~~~l~~~~~dg~i~ 194 (407)
-....+++|+++|.++++ +..++.|.+||..++....... ....+...+.++.++++ ++++++. ....|.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~~l~ 95 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD-MRLGLL 95 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-TTTEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE-CCCCEE
Confidence 345679999999988887 5678899999987764322111 00113345889999999 7655554 345799
Q ss_pred EEECCCCceecc-ccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCC---------------CeEEEEEcCC
Q 015438 195 IVDVGSGTMESL-ANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD---------------DCIYVYDLEA 258 (407)
Q Consensus 195 vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---------------g~i~i~d~~~ 258 (407)
+||.. ++.... ..... ......+.+++++++|+++++...+ +.|+.||..
T Consensus 96 ~~d~~-g~~~~~~~~~~~------------~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~- 161 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDSE------------GRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD- 161 (314)
T ss_dssp EEETT-SCEEECCSBCTT------------SCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-
T ss_pred EEeCC-CCEEEEEeccCC------------CccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-
Confidence 99988 654332 21100 0112357889999999877776554 578888876
Q ss_pred CeeeeeeeccCCCeEEEEec---CCCCC-EEEEEeCCCcEEEEeCcccCCCCc-----eeeeecccc-CCeEEEEecCCC
Q 015438 259 NKLSLRILAHTSDVNTVCFG---DESGH-LIYSGSDDNLCKVWDRRCLNVKGK-----PAGVLMGHL-EGITFIDSRGDG 328 (407)
Q Consensus 259 ~~~~~~~~~~~~~v~~i~~s---~~~~~-~l~s~~~d~~i~vwd~~~~~~~~~-----~~~~~~~~~-~~i~~~~~s~~~ 328 (407)
++... +..+......++|+ +++++ ++++...++.|.+||... .+. ....+.++. ..+..++++++|
T Consensus 162 g~~~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~---~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G 237 (314)
T 1pjx_A 162 GQMIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKG---PAKIENKKVWGHIPGTHEGGADGMDFDEDN 237 (314)
T ss_dssp SCEEE-EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEE---TTEEEEEEEEEECCCCSSCEEEEEEEBTTC
T ss_pred CCEEE-eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCC---CCccccceEEEECCCCCCCCCCceEECCCC
Confidence 55433 22334456788886 13454 455556788999999751 122 222333333 567889999999
Q ss_pred CEEEEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCCC--CCcceEEEeCCc
Q 015438 329 RYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHP--CDQSVATYKGHS 392 (407)
Q Consensus 329 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~v~~~~gh~ 392 (407)
+++++...++.|.+||.++++....+. .....+..+.|+++++.|.++ .++.|..|+-..
T Consensus 238 ~l~v~~~~~~~i~~~d~~~g~~~~~~~----~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 238 NLLVANWGSSHIEVFGPDGGQPKMRIR----CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CEEEEEETTTEEEEECTTCBSCSEEEE----CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CEEEEEcCCCEEEEEcCCCCcEeEEEe----CCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 988888888999999998665544331 122456788899999844433 345788887543
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.54 E-value=1.2e-11 Score=108.94 Aligned_cols=236 Identities=8% Similarity=-0.048 Sum_probs=160.5
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCc
Q 015438 123 TTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGT 202 (407)
Q Consensus 123 h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~ 202 (407)
+...+.+++++++|.++++...++.|..|+.... .... ........+..+++.|+++++++...++.|.+||. ++.
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~--~~~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~ 130 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKKGI--IKEY-TLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGK 130 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTTSC--EEEE-ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCCCc--EEEE-eCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCC
Confidence 3467999999999998888776889999998632 2221 12223345889999999988887777889999998 444
Q ss_pred eeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeee-eeccCCCeEEEEecCCC
Q 015438 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLR-ILAHTSDVNTVCFGDES 281 (407)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~v~~i~~s~~~ 281 (407)
...... . .....+..++++++|+++++...++.|..||. +++.... +......+..+++. ++
T Consensus 131 ~~~~~~-~--------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~-~~ 193 (299)
T 2z2n_A 131 IREYEL-P--------------NKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKG-ND 193 (299)
T ss_dssp EEEEEC-S--------------STTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEEC-TT
T ss_pred EEEecC-C--------------CCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEEC-CC
Confidence 322110 0 01225789999999987777767789999999 6655432 22344568899997 67
Q ss_pred CCEEEEEeCCCcEEEEeCcccCCCCcee-eeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCcc
Q 015438 282 GHLIYSGSDDNLCKVWDRRCLNVKGKPA-GVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRS 360 (407)
Q Consensus 282 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~-~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 360 (407)
++++++...++.|.+||.. +... .....+...+.+++++++|+.+++...++.|..||.. ++ ...+. ...
T Consensus 194 g~l~v~~~~~~~i~~~~~~-----g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~-~~~~~--~~~ 264 (299)
T 2z2n_A 194 DALWFVEIIGNKIGRITTS-----GEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN-NI-IEEYP--IQI 264 (299)
T ss_dssp SSEEEEETTTTEEEEECTT-----CCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT-TE-EEEEE--CSS
T ss_pred CCEEEEccCCceEEEECCC-----CcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCC-Cc-eEEEe--CCC
Confidence 8877777678899999983 2222 2233345678999999999977776678999999983 32 11211 111
Q ss_pred ccccceeeeCCCCCCccCCCCCcceEEEe
Q 015438 361 YEWDYRWMDYPPQARDLKHPCDQSVATYK 389 (407)
Q Consensus 361 ~~~~v~~~~~~~~~~~l~~~~~~~v~~~~ 389 (407)
....+..+.+ ++++++.+...+.+..|+
T Consensus 265 ~~~~~~~i~~-~~g~l~v~~~~~~l~~~~ 292 (299)
T 2z2n_A 265 KSAEPHGICF-DGETIWFAMECDKIGKLT 292 (299)
T ss_dssp SSCCEEEEEE-CSSCEEEEETTTEEEEEE
T ss_pred CCCccceEEe-cCCCEEEEecCCcEEEEE
Confidence 2234667777 888887665455555554
No 195
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.52 E-value=8.5e-12 Score=108.83 Aligned_cols=196 Identities=10% Similarity=0.038 Sum_probs=142.3
Q ss_pred CcccccCC-CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeC-CCeEE
Q 015438 117 PWPVDQTT-SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM-SPIVH 194 (407)
Q Consensus 117 ~~~~~~h~-~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-dg~i~ 194 (407)
.|.+..+. ..+.++.++|+|++|+ +.++.|..||. +++.+...... ....+.++.+.|+++.+++.+. ++.|.
T Consensus 28 ~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~--~~~~~~~~~~~~dG~~lv~~~~~~~~v~ 102 (276)
T 3no2_A 28 VWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAP--AGCEMQTARILPDGNALVAWCGHPSTIL 102 (276)
T ss_dssp EEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECC--TTCEEEEEEECTTSCEEEEEESTTEEEE
T ss_pred EEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCC--CCccccccEECCCCCEEEEecCCCCEEE
Confidence 33444443 4688999999999888 35788999999 67666654432 2235888999999999999887 77888
Q ss_pred EEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEE
Q 015438 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNT 274 (407)
Q Consensus 195 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~ 274 (407)
.+|. +++........... .++......+.+.++|+++++...++.|..||.. ++.+.++... ..+.+
T Consensus 103 ~vd~-~Gk~l~~~~~~~~~----------~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~ 169 (276)
T 3no2_A 103 EVNM-KGEVLSKTEFETGI----------ERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFS 169 (276)
T ss_dssp EECT-TSCEEEEEEECCSC----------SSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCE
T ss_pred EEeC-CCCEEEEEeccCCC----------CcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccc
Confidence 7875 45443332221100 0111234456788999999999999999999998 9888887654 34556
Q ss_pred EEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeecccc------CCeEEEEecCCCCEEEEEe
Q 015438 275 VCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHL------EGITFIDSRGDGRYLISNG 335 (407)
Q Consensus 275 i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~------~~i~~~~~s~~~~~l~s~~ 335 (407)
+... ++++++++++.++.|..+|.. +++.+..+..+. ..+..++..++|+.+++..
T Consensus 170 ~~~~-~~g~~~v~~~~~~~v~~~d~~----tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 170 SAFL-DNGDCLVACGDAHCFVQLNLE----SNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEC-TTSCEEEECBTTSEEEEECTT----TCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred eeEc-CCCCEEEEeCCCCeEEEEeCc----CCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 7775 789999998888899999987 788888776432 2378888999999888874
No 196
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.49 E-value=3.2e-12 Score=127.06 Aligned_cols=202 Identities=10% Similarity=0.030 Sum_probs=140.1
Q ss_pred eEEEEECCCCCEEEEEeCCCe----------------EEEEEcCCCeEEeEe-eeccccceEEEEEEECCCCCeEEEEeC
Q 015438 127 AYVSQFSADGSLFVAGFQASQ----------------IRIYDVERGWKIQKD-ILAKSLRWTVTDTSLSPDQRHLVYASM 189 (407)
Q Consensus 127 v~~~~~s~~~~~l~~~~~dg~----------------i~iwd~~~~~~~~~~-~~~~~~~~~v~~~~~sp~~~~l~~~~~ 189 (407)
+..++|+|||+.|+.++.++. |++|++.++...... .....+...+..+.|+||+++|+.++.
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 667999999999999888765 999999876421111 122233445788999999999998764
Q ss_pred -----CCeEEEEECCC------CceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCC----CeEEEE
Q 015438 190 -----SPIVHIVDVGS------GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD----DCIYVY 254 (407)
Q Consensus 190 -----dg~i~vwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~i~ 254 (407)
+..|++||+.+ +.. ....+.. +...+.. .|+|+|+.|+..+.. +.|++|
T Consensus 253 ~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~l~~--------------~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~ 316 (710)
T 2xdw_A 253 EGCDPVNRLWYCDLQQESNGITGIL-KWVKLID--------------NFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINI 316 (710)
T ss_dssp CSSSSCCEEEEEEGGGSSSSSCSSC-CCEEEEC--------------SSSSCEE-EEEEETTEEEEEECTTCTTCEEEEE
T ss_pred ccCCCccEEEEEECcccccccCCcc-ceEEeeC--------------CCCcEEE-EEeccCCEEEEEECCCCCCCEEEEE
Confidence 56899999876 321 0111110 1112333 488899887776653 369999
Q ss_pred EcCCCe--eeeeeeccCC--CeEEEEecCCCCCEEEEEeCCCc--EEEEeCcccCCCCceeeeeccccCCeEEEEecCCC
Q 015438 255 DLEANK--LSLRILAHTS--DVNTVCFGDESGHLIYSGSDDNL--CKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDG 328 (407)
Q Consensus 255 d~~~~~--~~~~~~~~~~--~v~~i~~s~~~~~~l~s~~~d~~--i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 328 (407)
|+.+++ ....+..+.. .+..++|+ +++.++++...|+. |.+||+. .++.+..+..+...+..++++|++
T Consensus 317 d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~lv~~~~~~g~~~l~~~~~~----~g~~~~~l~~~~~~v~~~~~s~d~ 391 (710)
T 2xdw_A 317 DFTDPEESKWKVLVPEHEKDVLEWVACV-RSNFLVLCYLHDVKNTLQLHDLA----TGALLKIFPLEVGSVVGYSGQKKD 391 (710)
T ss_dssp ETTSCCGGGCEEEECCCSSCEEEEEEEE-TTTEEEEEEEETTEEEEEEEETT----TCCEEEEECCCSSEEEEEECCTTC
T ss_pred eCCCCCcccceeccCCCCCCeEEEEEEE-cCCEEEEEEEECCEEEEEEEECC----CCCEEEecCCCCceEEEEecCCCC
Confidence 998764 2344445544 67889997 67778888888885 5666765 566667777777778899999998
Q ss_pred CEEEEE-e---CCCcEEEEECCCCC
Q 015438 329 RYLISN-G---KDQAIKLWDIRKMS 349 (407)
Q Consensus 329 ~~l~s~-~---~dg~i~iwd~~~~~ 349 (407)
..|+.. + ..++|.+||+.+++
T Consensus 392 ~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 392 TEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp SEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CEEEEEEeCCCCCCEEEEEECCCCc
Confidence 766633 2 35789999998876
No 197
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.48 E-value=7e-11 Score=104.07 Aligned_cols=237 Identities=12% Similarity=0.027 Sum_probs=162.1
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCce
Q 015438 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM 203 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~ 203 (407)
...+.+++++++|+.+++...++.|.+||.. +.... . ........+.++++.++++++++...++.|..+|.. ++.
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-F-EVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-E-ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-E-ECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 5678899999999988877778999999987 43322 1 122233468899999999887777667899999987 543
Q ss_pred eccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeee-eeeccCCCeEEEEecCCCC
Q 015438 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSL-RILAHTSDVNTVCFGDESG 282 (407)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~v~~i~~s~~~~ 282 (407)
... ... .....+.++++.++|+++++...++.|..+|.. ++... .+......+..+++. +++
T Consensus 95 ~~~-~~~--------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d-~~g 157 (300)
T 2qc5_A 95 TEY-PLP--------------QPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLG-SDN 157 (300)
T ss_dssp EEE-ECS--------------STTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEEC-TTS
T ss_pred EEe-cCC--------------CCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEEC-CCC
Confidence 211 110 011358899999999887777768899999987 55432 222344678899996 778
Q ss_pred CEEEEEeCCCcEEEEeCcccCCCCceee-eeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCccc
Q 015438 283 HLIYSGSDDNLCKVWDRRCLNVKGKPAG-VLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSY 361 (407)
Q Consensus 283 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~-~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 361 (407)
+++++...++.|..||.. ++... ....+...+..++++++|+.+++....+.|.+||. +++..... ....
T Consensus 158 ~l~v~~~~~~~i~~~~~~-----g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~---~~~~ 228 (300)
T 2qc5_A 158 ALWFTENQNNSIGRITNT-----GKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYD---IPTP 228 (300)
T ss_dssp SEEEEETTTTEEEEECTT-----CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEE---CSST
T ss_pred CEEEEecCCCeEEEECCC-----CcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEE---CCCC
Confidence 877777667899999973 22222 22234456889999999987777777788999998 33322111 1112
Q ss_pred cccceeeeCCCCCCccCCCC-CcceEEEeC
Q 015438 362 EWDYRWMDYPPQARDLKHPC-DQSVATYKG 390 (407)
Q Consensus 362 ~~~v~~~~~~~~~~~l~~~~-~~~v~~~~g 390 (407)
...+..+.++++++++.+.. ++.|..|+-
T Consensus 229 ~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 229 NARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred CCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 33456788888888776543 466777754
No 198
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.48 E-value=4.6e-12 Score=113.66 Aligned_cols=204 Identities=7% Similarity=-0.051 Sum_probs=138.9
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeecc--ccceEEEEEEECCCCCeEEEEe--CCCeEEEEECC
Q 015438 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK--SLRWTVTDTSLSPDQRHLVYAS--MSPIVHIVDVG 199 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~--~dg~i~vwd~~ 199 (407)
......++++++++.+++...++.|.+||..++.......... ........+++ . +..|.++. .++.|.++|+.
T Consensus 83 ~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~ 160 (328)
T 3dsm_A 83 FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTE 160 (328)
T ss_dssp CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETT
T ss_pred CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECC
Confidence 4678899999998555554478999999999886554433222 00012445666 3 44455544 48899999999
Q ss_pred CCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCC----------CeEEEEEcCCCeeeeeeecc-
Q 015438 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD----------DCIYVYDLEANKLSLRILAH- 268 (407)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~- 268 (407)
+++......... ....+.++|+|++++++..+ +.|.++|..+++....+...
T Consensus 161 t~~~~~~i~~g~-----------------~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~ 223 (328)
T 3dsm_A 161 TDKVVDELTIGI-----------------QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL 223 (328)
T ss_dssp TTEEEEEEECSS-----------------CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT
T ss_pred CCeEEEEEEcCC-----------------CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC
Confidence 887654332211 24568899999877776554 78999999999887666532
Q ss_pred CCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceee--eeccccCCeEEEEecC-CCCEEEEE----eCCCcEE
Q 015438 269 TSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAG--VLMGHLEGITFIDSRG-DGRYLISN----GKDQAIK 341 (407)
Q Consensus 269 ~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~--~~~~~~~~i~~~~~s~-~~~~l~s~----~~dg~i~ 341 (407)
......++++ ++++.|+++.. .|.+||.. +++... .+.........++++| +++.+++. ..++.|.
T Consensus 224 g~~p~~la~~-~d~~~lyv~~~--~v~~~d~~----t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~ 296 (328)
T 3dsm_A 224 GDWPSEVQLN-GTRDTLYWINN--DIWRMPVE----ADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVY 296 (328)
T ss_dssp TCCCEEEEEC-TTSCEEEEESS--SEEEEETT----CSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEE
T ss_pred CCCceeEEEe-cCCCEEEEEcc--EEEEEECC----CCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEE
Confidence 2368899998 67777777654 89999987 433321 1111245688999999 56666666 5789999
Q ss_pred EEECCCCCCcccc
Q 015438 342 LWDIRKMSSNASC 354 (407)
Q Consensus 342 iwd~~~~~~~~~~ 354 (407)
+||.. ++.+..+
T Consensus 297 v~d~~-g~~~~~i 308 (328)
T 3dsm_A 297 RYSPQ-GKLIDEF 308 (328)
T ss_dssp EECTT-CCEEEEE
T ss_pred EECCC-CCEEEEE
Confidence 99988 7665554
No 199
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.47 E-value=1.2e-12 Score=118.43 Aligned_cols=175 Identities=14% Similarity=0.059 Sum_probs=128.2
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeE--------EeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEE
Q 015438 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGWK--------IQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVD 197 (407)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~--------~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd 197 (407)
.++.+++++...++++|+.+ .+.+|+++.... ... .....+.. |+.++| ++++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~-~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTF-KWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCC-SEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccc-eEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 68999999999999999887 467798653220 111 01112445 999999 99999998 889999999
Q ss_pred CCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEe
Q 015438 198 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCF 277 (407)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~ 277 (407)
+.+........ .+...+.++.+.+. .+++++.||.|.+||+.+++... +...|.+++|
T Consensus 113 v~sl~~~~~~~----------------~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~W 170 (388)
T 1xip_A 113 LEELSEFRTVT----------------SFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDV 170 (388)
T ss_dssp SSSTTCEEEEE----------------ECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEE
T ss_pred chhhhccCccc----------------eeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEE
Confidence 98765322111 12235777777654 38889999999999999877643 3458999999
Q ss_pred cCCCCCEEEEEeCCCcEEEEeCcccCCCCce--eeee------c---cccCCeEEEEecCCCCEEEEEe
Q 015438 278 GDESGHLIYSGSDDNLCKVWDRRCLNVKGKP--AGVL------M---GHLEGITFIDSRGDGRYLISNG 335 (407)
Q Consensus 278 s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~--~~~~------~---~~~~~i~~~~~s~~~~~l~s~~ 335 (407)
| ++| ++.|..||.+++|+.. .... ...+ . +|...|.++.|.+++.++++=+
T Consensus 171 S-pkG--~~vg~~dg~i~~~~~~----~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 171 T-NSQ--LAVLLKDRSFQSFAWR----NGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp C-SSE--EEEEETTSCEEEEEEE----TTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred c-CCc--eEEEEcCCcEEEEcCC----CccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 9 666 6789999999999885 3332 3344 2 3678899999999999888643
No 200
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.47 E-value=1.4e-11 Score=113.88 Aligned_cols=202 Identities=10% Similarity=0.083 Sum_probs=137.9
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCC--eEEEEECCCCc
Q 015438 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP--IVHIVDVGSGT 202 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg--~i~vwd~~~~~ 202 (407)
.....++|+++++++++...++.|++||..++... ..... .. ... ++|+|+++.|+++..++ .|.+++...+.
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~-~~~~~--~~-~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVT-TVHPG--FK-GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEE-EEEET--CC-BCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEE-Eeecc--CC-CCc-eeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence 46789999999998888777899999999876433 22222 11 233 89999999998888766 78888876544
Q ss_pred eeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeee----eeccCCCe--EEEE
Q 015438 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLR----ILAHTSDV--NTVC 276 (407)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~----~~~~~~~v--~~i~ 276 (407)
......... ......+.+++++|++..|+++..++.|+.||..++..... ..++...- ..++
T Consensus 206 ~~~~~g~~~------------~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia 273 (409)
T 3hrp_A 206 APTRIGQLG------------STFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLI 273 (409)
T ss_dssp CEEEEEECC------------TTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEE
T ss_pred eeEEeeecc------------chhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEE
Confidence 321110000 00112467789999555566677788999999987754322 11222222 3899
Q ss_pred ecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccc---------------cCCeEEEEecCCCCEEEEEe-CCCcE
Q 015438 277 FGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGH---------------LEGITFIDSRGDGRYLISNG-KDQAI 340 (407)
Q Consensus 277 ~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~---------------~~~i~~~~~s~~~~~l~s~~-~dg~i 340 (407)
|+|.++.++++...++.|+.|+.. +. +..+.++ -.....++++|+|+++++-+ .++.|
T Consensus 274 ~~p~~g~lyv~d~~~~~I~~~~~~-----g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I 347 (409)
T 3hrp_A 274 YYFVDSNFYMSDQNLSSVYKITPD-----GE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCL 347 (409)
T ss_dssp EETTTTEEEEEETTTTEEEEECTT-----CC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEE
T ss_pred EeCCCCEEEEEeCCCCEEEEEecC-----CC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEE
Confidence 985567777777788999999975 22 2233232 23478999999999888887 89999
Q ss_pred EEEECCCCC
Q 015438 341 KLWDIRKMS 349 (407)
Q Consensus 341 ~iwd~~~~~ 349 (407)
+.||+.++.
T Consensus 348 ~~~~~~~G~ 356 (409)
T 3hrp_A 348 RKLDILDGY 356 (409)
T ss_dssp EEEETTTTE
T ss_pred EEEECCCCE
Confidence 999977654
No 201
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.47 E-value=1.1e-10 Score=102.69 Aligned_cols=234 Identities=8% Similarity=-0.030 Sum_probs=156.8
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCce
Q 015438 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM 203 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~ 203 (407)
...+.+++++++|.++++...++.|..||.. +... .. ........+.++++.++++++++...++.|..++.. ++.
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~ 136 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-EY-PLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI 136 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EE-ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-Ee-cCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE
Confidence 4678999999999988877667889999987 4332 21 222223458899999999888777768899999987 543
Q ss_pred eccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeee-eeccCCCeEEEEecCCCC
Q 015438 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLR-ILAHTSDVNTVCFGDESG 282 (407)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~v~~i~~s~~~~ 282 (407)
.... .. .....+..+++.+++++.++...++.|..+|. +++.... +..+...+..+++. +++
T Consensus 137 ~~~~-~~--------------~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d-~~g 199 (300)
T 2qc5_A 137 YEYD-LP--------------NKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSG-NDG 199 (300)
T ss_dssp EEEE-CS--------------STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEEC-TTS
T ss_pred EEcc-CC--------------CCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEEC-CCC
Confidence 3211 10 01225788999999996666666788999998 5554332 22334568899997 678
Q ss_pred CEEEEEeCCCcEEEEeCcccCCCCceee-eeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCccc
Q 015438 283 HLIYSGSDDNLCKVWDRRCLNVKGKPAG-VLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSY 361 (407)
Q Consensus 283 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~-~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 361 (407)
+++++....+.|.+||.. +.... .+..+...+.+++++++|+.+++...++.|..||.. ++.. .+. ....
T Consensus 200 ~l~v~~~~~~~i~~~~~~-----g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~--~~~~ 270 (300)
T 2qc5_A 200 ALWFVEIMGNKIGRITTT-----GEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND-NTIQ-EYQ--LQTE 270 (300)
T ss_dssp SEEEEETTTTEEEEECTT-----CCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEE--CCST
T ss_pred CEEEEccCCCEEEEEcCC-----CcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC-CcEE-EEE--CCcc
Confidence 887777677889999973 22222 233345678999999999977777677999999983 3221 111 1111
Q ss_pred cccceeeeCCCCCCccCCCCCcceEEE
Q 015438 362 EWDYRWMDYPPQARDLKHPCDQSVATY 388 (407)
Q Consensus 362 ~~~v~~~~~~~~~~~l~~~~~~~v~~~ 388 (407)
...+..+.+.++++++.+... .|..|
T Consensus 271 ~~~~~~i~~~~~g~l~v~~~~-~i~~~ 296 (300)
T 2qc5_A 271 NAEPHGITFGKDGSVWFALKC-KIGKL 296 (300)
T ss_dssp TCCCCCEEECTTSCEEEECSS-EEEEE
T ss_pred CCccceeEeCCCCCEEEEccC-ceEEe
Confidence 233566777888877665543 44444
No 202
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.46 E-value=3.2e-12 Score=126.75 Aligned_cols=199 Identities=14% Similarity=0.036 Sum_probs=134.4
Q ss_pred EEEEECCCCCEEEEEeCCCe-------------EEEEEcCCCeEE-eEeeeccccceEEEEEEECCCCCeEEEEeCCC--
Q 015438 128 YVSQFSADGSLFVAGFQASQ-------------IRIYDVERGWKI-QKDILAKSLRWTVTDTSLSPDQRHLVYASMSP-- 191 (407)
Q Consensus 128 ~~~~~s~~~~~l~~~~~dg~-------------i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg-- 191 (407)
..++|+|||+.|+.++.+.. |++|++.++... ........+...+..+.|+|||++|++++.++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 68899999999999988766 999999876421 11222333444688999999999999887665
Q ss_pred --eEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC----CCeEEEEEcCCCee--ee
Q 015438 192 --IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS----DDCIYVYDLEANKL--SL 263 (407)
Q Consensus 192 --~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----dg~i~i~d~~~~~~--~~ 263 (407)
.|.+|+..++....+.. +...+....+ ++|. |+..+. ++.|++||+.+++. ..
T Consensus 251 ~~~l~~~~~~~~~~~~l~~-----------------~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~ 311 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVK-----------------GVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWK 311 (695)
T ss_dssp EEEEEEECTTCSSCEEEEE-----------------CSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCE
T ss_pred ceEEEEEcCCCCceEEeec-----------------CCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCe
Confidence 67777655443322211 1113444555 5666 544443 58899999987653 23
Q ss_pred eeecc--CCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccc-cCCeEEEEecCCCCEEEEEe----C
Q 015438 264 RILAH--TSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGH-LEGITFIDSRGDGRYLISNG----K 336 (407)
Q Consensus 264 ~~~~~--~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~s~~----~ 336 (407)
.+..+ ...+..++|+ ++.++++...|+..++|.+.. .++....+..+ ...|..++++|++..|+... .
T Consensus 312 ~l~~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~---~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~ 386 (695)
T 2bkl_A 312 EIVPEDSSASLLSVSIV--GGHLSLEYLKDATSEVRVATL---KGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTT 386 (695)
T ss_dssp EEECCCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEET---TCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTE
T ss_pred EEecCCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeC---CCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCC
Confidence 33333 4457888886 567888899999888887641 34455555544 55678888999998776332 3
Q ss_pred CCcEEEEECCCCCC
Q 015438 337 DQAIKLWDIRKMSS 350 (407)
Q Consensus 337 dg~i~iwd~~~~~~ 350 (407)
.++|++||+.+++.
T Consensus 387 P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 387 PRQIYKTSVSTGKS 400 (695)
T ss_dssp EEEEEEEETTTCCE
T ss_pred CCEEEEEECCCCcE
Confidence 57899999987653
No 203
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.45 E-value=8.9e-11 Score=104.30 Aligned_cols=200 Identities=12% Similarity=0.124 Sum_probs=136.8
Q ss_pred CCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCCeEEeE-eeec-cccceEEEEEEECCCCCeEEEEeCC---------
Q 015438 123 TTSRAYVSQFSAD-GSLFVAGFQASQIRIYDVERGWKIQK-DILA-KSLRWTVTDTSLSPDQRHLVYASMS--------- 190 (407)
Q Consensus 123 h~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~-~~~~~~v~~~~~sp~~~~l~~~~~d--------- 190 (407)
+...+.+++++++ |+++++. ..+.|.+||.+ +..... .... ......+.+++++++++++++...+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVAD-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR 146 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEE-TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB
T ss_pred CCCCCceEEEecCCCcEEEEE-CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccc
Confidence 4567899999999 7655554 44579999988 543211 1111 1112347899999999887776554
Q ss_pred ------CeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEe----CCCCEEEEe-eCCCeEEEEEcC-C
Q 015438 191 ------PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFS----TDGRELVAG-SSDDCIYVYDLE-A 258 (407)
Q Consensus 191 ------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s----~~~~~l~~~-~~dg~i~i~d~~-~ 258 (407)
+.|..|+.. ++...... +......++|+ |+++.|+++ ..++.|++||+. +
T Consensus 147 ~~~~~~~~l~~~~~~-g~~~~~~~-----------------~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~ 208 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTD-GQMIQVDT-----------------AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGP 208 (314)
T ss_dssp TTSSSCEEEEEECTT-SCEEEEEE-----------------EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEET
T ss_pred cccCCCCeEEEECCC-CCEEEecc-----------------CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCC
Confidence 567777765 43322111 11145788999 999765554 567899999986 4
Q ss_pred Ce-----eeeeeeccC-CCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEE
Q 015438 259 NK-----LSLRILAHT-SDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLI 332 (407)
Q Consensus 259 ~~-----~~~~~~~~~-~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 332 (407)
++ ....+..+. ..+..++++ ++++++++...++.|.+||.. +++.+..+..+...+.+++|+|+++.|+
T Consensus 209 g~~~~~~~~~~~~~~~~~~p~~i~~d-~~G~l~v~~~~~~~i~~~d~~----~g~~~~~~~~~~~~~~~i~~~~dg~~l~ 283 (314)
T 1pjx_A 209 AKIENKKVWGHIPGTHEGGADGMDFD-EDNNLLVANWGSSHIEVFGPD----GGQPKMRIRCPFEKPSNLHFKPQTKTIF 283 (314)
T ss_dssp TEEEEEEEEEECCCCSSCEEEEEEEB-TTCCEEEEEETTTEEEEECTT----CBSCSEEEECSSSCEEEEEECTTSSEEE
T ss_pred CccccceEEEECCCCCCCCCCceEEC-CCCCEEEEEcCCCEEEEEcCC----CCcEeEEEeCCCCCceeEEECCCCCEEE
Confidence 43 222233333 567889997 788988888788999999986 4666666666667899999999999554
Q ss_pred -EEeCCCcEEEEECCC
Q 015438 333 -SNGKDQAIKLWDIRK 347 (407)
Q Consensus 333 -s~~~dg~i~iwd~~~ 347 (407)
+...++.|..|++..
T Consensus 284 v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 284 VTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEETTTTEEEEEECSS
T ss_pred EEeCCCCeEEEEeCCC
Confidence 555678999999875
No 204
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.45 E-value=6.8e-12 Score=124.20 Aligned_cols=203 Identities=15% Similarity=0.177 Sum_probs=134.2
Q ss_pred cCCCceEEEEECCCCCEEEEEe-----CCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCC-----
Q 015438 122 QTTSRAYVSQFSADGSLFVAGF-----QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP----- 191 (407)
Q Consensus 122 ~h~~~v~~~~~s~~~~~l~~~~-----~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg----- 191 (407)
+|...+..++|||||++||.+. ....|++||+.+++.+.... .. .....++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~--~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL--KD--VKFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE--EE--EESCCCEEE-TTTEEEEEESSCCC---
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc--CC--ceeccEEEe-CCCEEEEEEecCccccc
Confidence 4566899999999999988543 22579999999986543311 11 113568999 999999988774
Q ss_pred --------eEEEEECCCCceeccccccccccceeeeecCCCC-ccccEEEEEEeCCCCEEEEeeC----CCeEEEEEcCC
Q 015438 192 --------IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGG-YSFGIFSLKFSTDGRELVAGSS----DDCIYVYDLEA 258 (407)
Q Consensus 192 --------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~----dg~i~i~d~~~ 258 (407)
.|++|++.++......... ... +...+..+.|+|||++|+.... +..|+++|+.+
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~------------~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~ 268 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVFG------------AIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQ 268 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEES------------CSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTS
T ss_pred ccccCCCcEEEEEECCCCcccceEEEe------------cCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCC
Confidence 4999998876532111100 011 2224678999999998765432 35899999987
Q ss_pred Ce-eeeeeeccCCCeEEEEecCCCCCEEEEEeCC---CcEEEEeCcccCCCCce--eeeeccccCCeEEEEecCCCCEEE
Q 015438 259 NK-LSLRILAHTSDVNTVCFGDESGHLIYSGSDD---NLCKVWDRRCLNVKGKP--AGVLMGHLEGITFIDSRGDGRYLI 332 (407)
Q Consensus 259 ~~-~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d---~~i~vwd~~~~~~~~~~--~~~~~~~~~~i~~~~~s~~~~~l~ 332 (407)
+. ....+..+....... |++..+.+++.+..+ +.|..+|+. .+.. ...+..|...+. .|++++++|+
T Consensus 269 ~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~----~~~~~~~~~l~~~~~~~~--~~s~~g~~lv 341 (693)
T 3iuj_A 269 ENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAA----NPGPAHWRDLIPERQQVL--TVHSGSGYLF 341 (693)
T ss_dssp TTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETT----SCCGGGCEEEECCCSSCE--EEEEETTEEE
T ss_pred CCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCC----CCCccccEEEecCCCCEE--EEEEECCEEE
Confidence 63 345565666666555 543455555555544 579999987 3332 345556666665 8899999888
Q ss_pred EEeCCC---cEEEEECCCC
Q 015438 333 SNGKDQ---AIKLWDIRKM 348 (407)
Q Consensus 333 s~~~dg---~i~iwd~~~~ 348 (407)
....++ .|++||+...
T Consensus 342 ~~~~~~g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 342 AEYMVDATARVEQFDYEGK 360 (693)
T ss_dssp EEEEETTEEEEEEECTTSC
T ss_pred EEEEECCeeEEEEEECCCC
Confidence 776544 6889998743
No 205
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.44 E-value=4.4e-11 Score=105.66 Aligned_cols=227 Identities=9% Similarity=0.019 Sum_probs=146.8
Q ss_pred CCceEEEEECCCC-CEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCc
Q 015438 124 TSRAYVSQFSADG-SLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGT 202 (407)
Q Consensus 124 ~~~v~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~ 202 (407)
..-.-+..|+|++ .++++...++.|..||..++... . .. ....+.+++++|+++++++ . +..|.+||..+++
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~-~~---~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-R-VT---MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQS 84 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-E-EE---CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-E-Ee---CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCc
Confidence 3445688999965 45566667889999999876432 1 11 1235899999999995554 4 5679999998776
Q ss_pred eeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC-----------CCeEEEEEcCCCeeeeeeeccCCC
Q 015438 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-----------DDCIYVYDLEANKLSLRILAHTSD 271 (407)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----------dg~i~i~d~~~~~~~~~~~~~~~~ 271 (407)
...+..... ......++.++++|+|+++++... .+.|+.+|.. ++. ..+......
T Consensus 85 ~~~~~~~~~------------~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~-~~~~~~~~~ 150 (297)
T 3g4e_A 85 AVVLATVDN------------DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHV-KKYFDQVDI 150 (297)
T ss_dssp EEEEEECCT------------TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCE-EEEEEEESB
T ss_pred EEEEEecCC------------CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCE-EEEeecccc
Confidence 543322110 011235789999999996665422 2345555543 333 223334455
Q ss_pred eEEEEecCCCCCEE-EEEeCCCcEEEEeCcccCCCCc-----eeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEEC
Q 015438 272 VNTVCFGDESGHLI-YSGSDDNLCKVWDRRCLNVKGK-----PAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDI 345 (407)
Q Consensus 272 v~~i~~s~~~~~~l-~s~~~d~~i~vwd~~~~~~~~~-----~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~ 345 (407)
...++|+ ++++.| ++.+.++.|.+||+... .+. .+..+..+...+..++++++|++.++...++.|.+||.
T Consensus 151 pngi~~s-pdg~~lyv~~~~~~~i~~~~~d~~--~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~ 227 (297)
T 3g4e_A 151 SNGLDWS-LDHKIFYYIDSLSYSVDAFDYDLQ--TGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDP 227 (297)
T ss_dssp EEEEEEC-TTSCEEEEEEGGGTEEEEEEECTT--TCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECT
T ss_pred ccceEEc-CCCCEEEEecCCCCcEEEEeccCC--CCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcC
Confidence 6889998 677655 55666789999987311 222 22233334456789999999998888888889999999
Q ss_pred CCCCCcccccCCCccccccceeeeCC-CCCCccC
Q 015438 346 RKMSSNASCNLGFRSYEWDYRWMDYP-PQARDLK 378 (407)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~ 378 (407)
.+++.+..+. .....+++++|. |+++.|.
T Consensus 228 ~tG~~~~~i~----~p~~~~t~~~f~g~d~~~L~ 257 (297)
T 3g4e_A 228 VTGKRLQTVK----LPVDKTTSCCFGGKNYSEMY 257 (297)
T ss_dssp TTCCEEEEEE----CSSSBEEEEEEESGGGCEEE
T ss_pred CCceEEEEEE----CCCCCceEEEEeCCCCCEEE
Confidence 8877655442 223456778886 6765443
No 206
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.42 E-value=1e-12 Score=118.89 Aligned_cols=185 Identities=14% Similarity=0.071 Sum_probs=128.9
Q ss_pred EEEEEEECCCCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCe
Q 015438 171 TVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDC 250 (407)
Q Consensus 171 ~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 250 (407)
++..+++++...++++|+.++ +.+|++.................... .+.. |+.++| ++++|+++ .++.
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~------~lp~-V~~l~f--d~~~L~v~-~~~~ 107 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK------EIPD-VIFVCF--HGDQVLVS-TRNA 107 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE------ECTT-EEEEEE--ETTEEEEE-ESSE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe------eCCC-eeEEEE--CCCEEEEE-cCCc
Confidence 488899999999999999875 66698754321000000000000000 1334 999999 88999999 8899
Q ss_pred EEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCE
Q 015438 251 IYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRY 330 (407)
Q Consensus 251 i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 330 (407)
|++||+.+.........+..++.++.+.+++ +++++.||.|.+||+. .+.... +...|++++|+|+|
T Consensus 108 l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~---~av~~~dG~L~v~dl~----~~~~~~----~~~~Vs~v~WSpkG-- 174 (388)
T 1xip_A 108 LYSLDLEELSEFRTVTSFEKPVFQLKNVNNT---LVILNSVNDLSALDLR----TKSTKQ----LAQNVTSFDVTNSQ-- 174 (388)
T ss_dssp EEEEESSSTTCEEEEEECSSCEEEEEECSSE---EEEEETTSEEEEEETT----TCCEEE----EEESEEEEEECSSE--
T ss_pred EEEEEchhhhccCccceeecceeeEEecCCC---EEEEECCCCEEEEEcc----CCcccc----ccCCceEEEEcCCc--
Confidence 9999998877666677788889998887443 8888999999999997 444432 45689999999999
Q ss_pred EEEEeCCCcEEEEECCCCCC--cccccCC--Cc---cccccceeeeCCCCCCccCC
Q 015438 331 LISNGKDQAIKLWDIRKMSS--NASCNLG--FR---SYEWDYRWMDYPPQARDLKH 379 (407)
Q Consensus 331 l~s~~~dg~i~iwd~~~~~~--~~~~~~~--~~---~~~~~v~~~~~~~~~~~l~~ 379 (407)
++.|..||++++|+...... ..++... .. .+...+..+.|.++..++.+
T Consensus 175 ~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 175 LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 78899999999998877653 2222110 11 23466777777777766653
No 207
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.41 E-value=4e-10 Score=99.45 Aligned_cols=190 Identities=8% Similarity=0.039 Sum_probs=128.0
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeec-cccceEEEEEEECCCCCeEEEEeCC---------C
Q 015438 122 QTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILA-KSLRWTVTDTSLSPDQRHLVYASMS---------P 191 (407)
Q Consensus 122 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~d---------g 191 (407)
.+...+.+++++++|+++++ . ++.|.+||.+++......... ......+.+++++|+|+++++.... .
T Consensus 51 ~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~ 128 (297)
T 3g4e_A 51 TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERH 128 (297)
T ss_dssp ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTT
T ss_pred eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCC
Confidence 34578999999999995554 3 568999999877432211111 1123458999999999977654321 2
Q ss_pred eEEEEECCC-CceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEE-EeeCCCeEEEEEc--CCCee-----e
Q 015438 192 IVHIVDVGS-GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELV-AGSSDDCIYVYDL--EANKL-----S 262 (407)
Q Consensus 192 ~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~i~d~--~~~~~-----~ 262 (407)
.-.||.+.. +....... .....+.++|+|+++.|+ +.+.++.|.+||+ .++.. .
T Consensus 129 ~~~l~~~d~~g~~~~~~~-----------------~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~ 191 (297)
T 3g4e_A 129 QGALYSLFPDHHVKKYFD-----------------QVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSV 191 (297)
T ss_dssp CEEEEEECTTSCEEEEEE-----------------EESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEE
T ss_pred CcEEEEEECCCCEEEEee-----------------ccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEE
Confidence 234554442 22211110 111457899999998665 4556789999997 45542 2
Q ss_pred eeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEec-CCCCEEEEEe
Q 015438 263 LRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSR-GDGRYLISNG 335 (407)
Q Consensus 263 ~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~~~~l~s~~ 335 (407)
..+..+.+....+++. ++|++.++....+.|.+||.. +++.+..+..+...+++++|. |+++.|+.++
T Consensus 192 ~~~~~~~~~p~g~~~d-~~G~lwva~~~~~~v~~~d~~----tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 192 YKLEKEEQIPDGMCID-AEGKLWVACYNGGRVIRLDPV----TGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EECCGGGCEEEEEEEB-TTSCEEEEEETTTEEEEECTT----TCCEEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred EECCCCCCCCCeeEEC-CCCCEEEEEcCCCEEEEEcCC----CceEEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence 2233344567889996 788888888888899999986 688888887777789999998 8887766555
No 208
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.39 E-value=8.4e-11 Score=104.25 Aligned_cols=236 Identities=10% Similarity=0.020 Sum_probs=146.5
Q ss_pred CcccccCCCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEE
Q 015438 117 PWPVDQTTSRAYVSQFSADGS-LFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHI 195 (407)
Q Consensus 117 ~~~~~~h~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~v 195 (407)
...+...........|+|+|+ ++++...++.|..|+.. +. ...... ....+..++++++++++++...++.|.+
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~~~~~---~~~~~~gl~~d~dG~l~v~~~~~~~v~~ 111 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-VDVLLD---ATAFTNGNAVDAQQRLVHCEHGRRAITR 111 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-EEEEEE---SCSCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-EEEEeC---CCCccceeeECCCCCEEEEECCCCEEEE
Confidence 344444556678899999998 56666678899999984 42 222111 2235889999999997766656678999
Q ss_pred EECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEE----eeC-------------CCeEEEEEcCC
Q 015438 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA----GSS-------------DDCIYVYDLEA 258 (407)
Q Consensus 196 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~----~~~-------------dg~i~i~d~~~ 258 (407)
|+.. ++...+.... .+ .....+.++.++++|+++++ |.. .+.|+.||..+
T Consensus 112 ~~~~-g~~~~~~~~~---~~---------~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~ 178 (305)
T 3dr2_A 112 SDAD-GQAHLLVGRY---AG---------KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDG 178 (305)
T ss_dssp ECTT-SCEEEEECEE---TT---------EECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSS
T ss_pred ECCC-CCEEEEEecc---CC---------CccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCC
Confidence 9976 4432221110 00 01124677999999997776 432 35688888877
Q ss_pred CeeeeeeeccCCCeEEEEecCCCCCEEEEEeCC------CcEEEEeCcccCCCCce--eeee-ccccCCeEEEEecCCCC
Q 015438 259 NKLSLRILAHTSDVNTVCFGDESGHLIYSGSDD------NLCKVWDRRCLNVKGKP--AGVL-MGHLEGITFIDSRGDGR 329 (407)
Q Consensus 259 ~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d------~~i~vwd~~~~~~~~~~--~~~~-~~~~~~i~~~~~s~~~~ 329 (407)
++..... .......++|+ ++++.|+.+... +.|.+||+. .... ...+ ......+..++++++|+
T Consensus 179 g~~~~~~--~~~~p~gl~~s-pdg~~lyv~~~~~~~~~~~~i~~~~~~----~~~l~~~~~~~~~~~~~pdgi~~d~~G~ 251 (305)
T 3dr2_A 179 SPLQRMA--DLDHPNGLAFS-PDEQTLYVSQTPEQGHGSVEITAFAWR----DGALHDRRHFASVPDGLPDGFCVDRGGW 251 (305)
T ss_dssp CCCEEEE--EESSEEEEEEC-TTSSEEEEEECCC---CCCEEEEEEEE----TTEEEEEEEEECCSSSCCCSEEECTTSC
T ss_pred CcEEEEe--cCCCCcceEEc-CCCCEEEEEecCCcCCCCCEEEEEEec----CCCccCCeEEEECCCCCCCeEEECCCCC
Confidence 7654333 34567889998 778877666554 789999986 2221 0111 11233456788999999
Q ss_pred EEEEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCCCCCcce
Q 015438 330 YLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSV 385 (407)
Q Consensus 330 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v 385 (407)
+.++ +.+ .|.+||.. ++....+.. .. .+..+.|+++++.|.+...+.+
T Consensus 252 lwv~-~~~-gv~~~~~~-g~~~~~~~~----~~-~~~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 252 LWSS-SGT-GVCVFDSD-GQLLGHIPT----PG-TASNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp EEEC-CSS-EEEEECTT-SCEEEEEEC----SS-CCCEEEECTTSCEEEEEETTEE
T ss_pred EEEe-cCC-cEEEECCC-CCEEEEEEC----CC-ceeEEEEeCCCCEEEEEcCCeE
Confidence 5544 444 49999974 444333321 11 3667778877765554433333
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.35 E-value=6.6e-10 Score=101.16 Aligned_cols=236 Identities=10% Similarity=-0.018 Sum_probs=144.2
Q ss_pred ECCCCCEEEEEeC--CC---eEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEe----------CCCeEEEE
Q 015438 132 FSADGSLFVAGFQ--AS---QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS----------MSPIVHIV 196 (407)
Q Consensus 132 ~s~~~~~l~~~~~--dg---~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~----------~dg~i~vw 196 (407)
..|+++++++... .. .|.+||..+++.+..+... .. - .+.++||+++++++. .++.|.+|
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g---~~-p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~vi 102 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGG---FL-P-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVF 102 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCC---CC-C-CeEECCCCCEEEEEeccccccccCCCCCeEEEE
Confidence 4467777666643 22 8899999988655433221 12 2 899999999999886 36789999
Q ss_pred ECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC--CCeEEEEEcCCCeeeee-eeccCCCeE
Q 015438 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS--DDCIYVYDLEANKLSLR-ILAHTSDVN 273 (407)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~i~d~~~~~~~~~-~~~~~~~v~ 273 (407)
|..+.+............ + . .......+.|+|||++|++++. ++.|.++| .+++.+.. +... +.
T Consensus 103 D~~t~~~~~~i~~~~~~~---~----~--~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~~-- 169 (373)
T 2mad_H 103 DPVTFLPIADIELPDAPR---F----D--VGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-TC-- 169 (373)
T ss_pred ECCCCcEEEEEECCCccc---c----c--cCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-ce--
Confidence 998776654433220000 0 0 0012347899999999998874 47899999 99988777 5322 11
Q ss_pred EEEecCCCCCEEEEEeCCCcEEEEeCcccCC--------------------------------------------CC--c
Q 015438 274 TVCFGDESGHLIYSGSDDNLCKVWDRRCLNV--------------------------------------------KG--K 307 (407)
Q Consensus 274 ~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~--------------------------------------------~~--~ 307 (407)
+.+.|...+.+++.+.||.+.++|. ..+. .. .
T Consensus 170 -~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~ 247 (373)
T 2mad_H 170 -YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGAT 247 (373)
T ss_pred -EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcce
Confidence 2222233334444445555555544 1100 00 0
Q ss_pred eeeeecc----------ccCCeEEEEecCCCCEEEEEeC----------CCcEEEEECCCCCCcccccCCCcccccccee
Q 015438 308 PAGVLMG----------HLEGITFIDSRGDGRYLISNGK----------DQAIKLWDIRKMSSNASCNLGFRSYEWDYRW 367 (407)
Q Consensus 308 ~~~~~~~----------~~~~i~~~~~s~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~ 367 (407)
.+..+.- .......+.++|+++.++.+.. ++.|.++|+.+.+.+..+..+ .....
T Consensus 248 v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g-----~~p~~ 322 (373)
T 2mad_H 248 NKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG-----HDVDA 322 (373)
T ss_pred EeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC-----CCcCe
Confidence 0011100 0112334778899888777643 357999999998877665322 14567
Q ss_pred eeCCCCCC-ccCCC--CCcceEEEeCCc
Q 015438 368 MDYPPQAR-DLKHP--CDQSVATYKGHS 392 (407)
Q Consensus 368 ~~~~~~~~-~l~~~--~~~~v~~~~gh~ 392 (407)
+.|+|+++ ++.+. .++.|.+|+..+
T Consensus 323 i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 323 ISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred EEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 89999998 56554 378999998765
No 210
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.35 E-value=1.5e-09 Score=98.78 Aligned_cols=218 Identities=14% Similarity=0.105 Sum_probs=137.0
Q ss_pred EEEECCCCCEEEEEe----------CCCeEEEEEcCCCeEEeEeeec-ccc---ceEEEEEEECCCCCeEEEEeC--CCe
Q 015438 129 VSQFSADGSLFVAGF----------QASQIRIYDVERGWKIQKDILA-KSL---RWTVTDTSLSPDQRHLVYASM--SPI 192 (407)
Q Consensus 129 ~~~~s~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~-~~~---~~~v~~~~~sp~~~~l~~~~~--dg~ 192 (407)
.++++|||++++++. .++.|.+||..+.+.+...... ... ......+.|+||+++|++++. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 899999999998875 3678999999887655543322 000 112457899999999999874 578
Q ss_pred EEEEECCCCceecc-ccccccc----cc-ee-eeecCC--------CCccc-------------c-EEEEEEeCCCCEEE
Q 015438 193 VHIVDVGSGTMESL-ANVTEIH----DG-LD-FSAADD--------GGYSF-------------G-IFSLKFSTDGRELV 243 (407)
Q Consensus 193 i~vwd~~~~~~~~~-~~~~~~~----~~-~~-~~~~~~--------~~~~~-------------~-v~~~~~s~~~~~l~ 243 (407)
|.++| .+++.... ....... .+ .. .....+ .+... + .....+.+++..++
T Consensus 150 v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 228 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIV 228 (373)
T ss_pred EEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEE
Confidence 99999 98877555 4332110 00 00 000000 00000 0 01123455554444
Q ss_pred EeeCCCeEEEEEcCCCe--eeeeeec----------cCCCeEEEEecCCCCCEEEEEeC----------CCcEEEEeCcc
Q 015438 244 AGSSDDCIYVYDLEANK--LSLRILA----------HTSDVNTVCFGDESGHLIYSGSD----------DNLCKVWDRRC 301 (407)
Q Consensus 244 ~~~~dg~i~i~d~~~~~--~~~~~~~----------~~~~v~~i~~s~~~~~~l~s~~~----------d~~i~vwd~~~ 301 (407)
..+..+.+.+.|+.+.. .+..+.. .......+.++ ++++.++.+.. .+.|.++|+.
T Consensus 229 ~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s-~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~- 306 (373)
T 2mad_H 229 WPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYL-KSSDGIYLLTSEQSAWKLHAAAKEVTSVTGL- 306 (373)
T ss_pred EEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEEC-CCCCEEEEEeccCCcccccCCCCeEEEEECC-
Confidence 44467788888886543 2222211 11223447787 56666655442 3579999998
Q ss_pred cCCCCceeeeeccccCCeEEEEecCCCC-EEEEEe-CCCcEEEEECCCCCCccc
Q 015438 302 LNVKGKPAGVLMGHLEGITFIDSRGDGR-YLISNG-KDQAIKLWDIRKMSSNAS 353 (407)
Q Consensus 302 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~s~~-~dg~i~iwd~~~~~~~~~ 353 (407)
+.+.+..+. ......+++|+|||+ .++++. .++.|.+||+.+++.+..
T Consensus 307 ---t~~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 307 ---VGQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred ---CCEEEEEEE-CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 777777774 333578999999999 777777 589999999999887665
No 211
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.35 E-value=1.5e-09 Score=97.08 Aligned_cols=185 Identities=12% Similarity=0.025 Sum_probs=123.6
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeecc--ccceEEEEEEECCCCCeEEEEeC------CCeEEE
Q 015438 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK--SLRWTVTDTSLSPDQRHLVYASM------SPIVHI 195 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~------dg~i~v 195 (407)
...+.+++|+|+|+++++. . ..|.+||..++.... ..... .....+.++.++|+|+++++... .+.|..
T Consensus 89 ~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~-~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~ 165 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTL-HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYH 165 (326)
T ss_dssp SSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEE-EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEE
T ss_pred CCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEE-EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEE
Confidence 4679999999999877765 4 459999998774322 21111 12346899999999987665432 245666
Q ss_pred EECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEe-eCCCeEEEEEcC--CC-ee-----eeeee
Q 015438 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG-SSDDCIYVYDLE--AN-KL-----SLRIL 266 (407)
Q Consensus 196 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~i~d~~--~~-~~-----~~~~~ 266 (407)
++ +++...... .......++|+|+++.|+.+ +.++.|.+||+. ++ +. +..+.
T Consensus 166 ~~--~g~~~~~~~-----------------~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~ 226 (326)
T 2ghs_A 166 VA--KGKVTKLFA-----------------DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDST 226 (326)
T ss_dssp EE--TTEEEEEEE-----------------EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECT
T ss_pred Ee--CCcEEEeeC-----------------CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECC
Confidence 66 343322110 11145789999999876554 457899999986 55 32 22222
Q ss_pred ccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEec-CCCCEEEEEeC
Q 015438 267 AHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSR-GDGRYLISNGK 336 (407)
Q Consensus 267 ~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~~~~l~s~~~ 336 (407)
.....+..+++. ++++++++...++.|.+||. .++.+..+..+...+++++|+ ++++.|+.++.
T Consensus 227 ~~~~~p~gi~~d-~~G~lwva~~~~~~v~~~d~-----~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 227 GIKGGMDGSVCD-AEGHIWNARWGEGAVDRYDT-----DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp TSSSEEEEEEEC-TTSCEEEEEETTTEEEEECT-----TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred CCCCCCCeeEEC-CCCCEEEEEeCCCEEEEECC-----CCCEEEEEECCCCCcEEEEEecCCCCEEEEEec
Confidence 234556788996 78888877777789999997 355666666666679999998 88877755543
No 212
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.34 E-value=4e-10 Score=100.84 Aligned_cols=224 Identities=13% Similarity=0.090 Sum_probs=142.5
Q ss_pred ceEEEEECCCCC-EEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCcee
Q 015438 126 RAYVSQFSADGS-LFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTME 204 (407)
Q Consensus 126 ~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~ 204 (407)
-..+..|+|++. ++++...++.|..||..++... .. .. ...+.++.|+|+++++++. . ..|.+||..+++..
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~-~~---~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VH-AL---PFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLT 122 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EE-EC---SSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EE-EC---CCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEE
Confidence 456789999754 5556666889999999887432 21 11 2358999999999877764 3 44999999877654
Q ss_pred ccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC------CCeEEEEEcCCCeeeeeeeccCCCeEEEEec
Q 015438 205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS------DDCIYVYDLEANKLSLRILAHTSDVNTVCFG 278 (407)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s 278 (407)
.+..... ......+.++.++|+|+++++... .+.|+.+| +++.. .+..+......++|+
T Consensus 123 ~~~~~~~------------~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~~s 187 (326)
T 2ghs_A 123 LHAELES------------DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSICFS 187 (326)
T ss_dssp EEECSST------------TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEEEC
T ss_pred EEeeCCC------------CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeEEc
Confidence 3221110 011236889999999986665432 25677777 45543 333334457889998
Q ss_pred CCCCCEE-EEEeCCCcEEEEeCc--cc-CCC-CceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCccc
Q 015438 279 DESGHLI-YSGSDDNLCKVWDRR--CL-NVK-GKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNAS 353 (407)
Q Consensus 279 ~~~~~~l-~s~~~d~~i~vwd~~--~~-~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 353 (407)
++++.+ ++.+.++.|.+||+. .. ... ...+..+......+..++++++|+++++...++.|.+||. +++....
T Consensus 188 -~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~ 265 (326)
T 2ghs_A 188 -PDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIAR 265 (326)
T ss_dssp -TTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEE
T ss_pred -CCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEE
Confidence 677755 444567899999974 11 111 1122233333445778999999998887777789999998 4443333
Q ss_pred ccCCCccccccceeeeCC-CCCCcc
Q 015438 354 CNLGFRSYEWDYRWMDYP-PQARDL 377 (407)
Q Consensus 354 ~~~~~~~~~~~v~~~~~~-~~~~~l 377 (407)
+ ......+.+++|+ ++++.|
T Consensus 266 i----~~~~~~~~~~af~g~d~~~L 286 (326)
T 2ghs_A 266 Y----EVPGKQTTCPAFIGPDASRL 286 (326)
T ss_dssp E----ECSCSBEEEEEEESTTSCEE
T ss_pred E----ECCCCCcEEEEEecCCCCEE
Confidence 2 1223357788887 776544
No 213
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.33 E-value=5.4e-10 Score=100.76 Aligned_cols=255 Identities=12% Similarity=-0.003 Sum_probs=159.2
Q ss_pred EECCCCCEEEEEeC-----CCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEe----------CCCeEEE
Q 015438 131 QFSADGSLFVAGFQ-----ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS----------MSPIVHI 195 (407)
Q Consensus 131 ~~s~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~----------~dg~i~v 195 (407)
...|+++.+++... ++.|.++|..+++.+..+..... + . +.++||++++++++ .++.|.+
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~---P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsv 113 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL---P-N-PVVADDGSFIAHASTVFSRIARGERTDYVEV 113 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSS---C-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCC---C-c-EEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 45689988887765 57999999999877665544332 2 3 99999999998875 3678999
Q ss_pred EECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC--CCeEEEEEcCCCeeeeeeeccCCCeE
Q 015438 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS--DDCIYVYDLEANKLSLRILAHTSDVN 273 (407)
Q Consensus 196 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~v~ 273 (407)
||..+.+......+...... ........+.|+|||++++++.. ++.|.++|+.+++.+..+.... +
T Consensus 114 iD~~t~~v~~~I~v~~g~r~---------~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~- 181 (386)
T 3sjl_D 114 FDPVTLLPTADIELPDAPRF---------LVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C- 181 (386)
T ss_dssp ECTTTCCEEEEEEETTCCCC---------CBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-
T ss_pred EECCCCeEEEEEECCCcccc---------ccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-
Confidence 99999887655433210000 00002335899999999888864 6899999999999988885422 2
Q ss_pred EEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccc----cCCeE-EEEec-CCCCEEEEEeCCCcEEEEECCC
Q 015438 274 TVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGH----LEGIT-FIDSR-GDGRYLISNGKDQAIKLWDIRK 347 (407)
Q Consensus 274 ~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~----~~~i~-~~~~s-~~~~~l~s~~~dg~i~iwd~~~ 347 (407)
...+ |...+.+++.+.||.+.+.++.. .++.......+ ..++. ...|. ++|++++ .+.+|.|.+.|+.+
T Consensus 182 ~~~~-P~g~~~~~~~~~DG~~~~v~~~~---~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~ 256 (386)
T 3sjl_D 182 YHIF-PTAPDTFFMHCRDGSLAKVAFGT---EGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSS 256 (386)
T ss_dssp EEEE-EEETTEEEEEETTSCEEEEECCS---SSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTT
T ss_pred ceee-cCCCceeEEECCCCCEEEEECCC---CCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCC
Confidence 2333 56667788888999999999862 13332211111 12221 23564 6776555 55589999999976
Q ss_pred CCCc--ccccC-C-----CccccccceeeeCCCCCCccCCCC-----------CcceEEEeCCccc--------eeeEEE
Q 015438 348 MSSN--ASCNL-G-----FRSYEWDYRWMDYPPQARDLKHPC-----------DQSVATYKGHSVL--------RTLIRC 400 (407)
Q Consensus 348 ~~~~--~~~~~-~-----~~~~~~~v~~~~~~~~~~~l~~~~-----------~~~v~~~~gh~~~--------~~~~~~ 400 (407)
.... ..+.. . .......++.+.+++++..+.+.. ...|.+++..+.. .....+
T Consensus 257 ~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~l 336 (386)
T 3sjl_D 257 GDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSI 336 (386)
T ss_dssp SSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEE
T ss_pred CcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceE
Confidence 5431 11110 0 000111233466677765554421 2557777765421 234577
Q ss_pred eeCCCCC
Q 015438 401 HFSPVYR 407 (407)
Q Consensus 401 ~fsp~~~ 407 (407)
.||||.|
T Consensus 337 avs~D~~ 343 (386)
T 3sjl_D 337 NVSQDEK 343 (386)
T ss_dssp EECSSSS
T ss_pred EECCCCC
Confidence 8898864
No 214
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.32 E-value=4.8e-11 Score=119.10 Aligned_cols=191 Identities=15% Similarity=0.111 Sum_probs=123.0
Q ss_pred CCCCCEEEEEeCCCe---EEEE--EcC---CCeEEeEee----eccccceEEEEEEECCCCCeEEEEeCC-----CeEEE
Q 015438 133 SADGSLFVAGFQASQ---IRIY--DVE---RGWKIQKDI----LAKSLRWTVTDTSLSPDQRHLVYASMS-----PIVHI 195 (407)
Q Consensus 133 s~~~~~l~~~~~dg~---i~iw--d~~---~~~~~~~~~----~~~~~~~~v~~~~~sp~~~~l~~~~~d-----g~i~v 195 (407)
+|+|++++....++. -.+| +.. .+. ...+. ....+...+..++|||||++|+.+..+ ..|++
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v 193 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTK-GRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKF 193 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCC-CEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCC-CEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEE
Confidence 389998887654432 4444 443 332 12211 122334568899999999999987643 36999
Q ss_pred EECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCe--------------EEEEEcCCCee
Q 015438 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDC--------------IYVYDLEANKL 261 (407)
Q Consensus 196 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~--------------i~i~d~~~~~~ 261 (407)
||+.+++..... . +...+..++|+|| +.|+.++.++. |++|++.++..
T Consensus 194 ~dl~tg~~~~~~-~----------------~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~ 255 (741)
T 1yr2_A 194 VGVADGKPLADE-L----------------KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQS 255 (741)
T ss_dssp EETTTCCEEEEE-E----------------EEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGG
T ss_pred EECCCCCCCCcc-C----------------CCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCch
Confidence 999998764321 0 0012346899999 98888876554 99999987652
Q ss_pred --eeeee--ccCCCeEEEEecCCCCCEEEEEeCC-----CcEEEEeCcccCCCC--ceeeeeccccCCeEEEEecCCCCE
Q 015438 262 --SLRIL--AHTSDVNTVCFGDESGHLIYSGSDD-----NLCKVWDRRCLNVKG--KPAGVLMGHLEGITFIDSRGDGRY 330 (407)
Q Consensus 262 --~~~~~--~~~~~v~~i~~s~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~--~~~~~~~~~~~~i~~~~~s~~~~~ 330 (407)
...+. .+...+..+.|+ ++|++|+..+.+ ..|++||+. .+ .+...+..+...+.... +|+|..
T Consensus 256 ~~~lv~~~~~~~~~~~~~~~S-pDG~~l~~~~~~~~~~~~~l~~~d~~----~~~~~~~~~l~~~~~~~~~~~-~~dg~~ 329 (741)
T 1yr2_A 256 ADQPVFATPELPKRGHGASVS-SDGRWVVITSSEGTDPVNTVHVARVT----NGKIGPVTALIPDLKAQWDFV-DGVGDQ 329 (741)
T ss_dssp GCEEEECCTTCTTCEEEEEEC-TTSCEEEEEEECTTCSCCEEEEEEEE----TTEECCCEEEECSSSSCEEEE-EEETTE
T ss_pred hCEEEeccCCCCeEEEEEEEC-CCCCEEEEEEEccCCCcceEEEEECC----CCCCcccEEecCCCCceEEEE-eccCCE
Confidence 12222 233358899998 788888777644 389999986 43 21445555555555553 488998
Q ss_pred EEEEeCC----CcEEEEECCCC
Q 015438 331 LISNGKD----QAIKLWDIRKM 348 (407)
Q Consensus 331 l~s~~~d----g~i~iwd~~~~ 348 (407)
|+..+.+ +.|.+||+.+.
T Consensus 330 l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 330 LWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp EEEEECTTCTTCEEEEEECSSS
T ss_pred EEEEECCCCCCCEEEEEeCCCC
Confidence 8877753 45999999875
No 215
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.31 E-value=1.9e-10 Score=103.74 Aligned_cols=242 Identities=9% Similarity=-0.053 Sum_probs=148.5
Q ss_pred CceEEEEECCCCCEEEEEeC--CCeEEEEEcCCCeEEeEee----eccccceEEEEEEECCCCCeEEEEeC-----CCeE
Q 015438 125 SRAYVSQFSADGSLFVAGFQ--ASQIRIYDVERGWKIQKDI----LAKSLRWTVTDTSLSPDQRHLVYASM-----SPIV 193 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~----~~~~~~~~v~~~~~sp~~~~l~~~~~-----dg~i 193 (407)
..+..++++|+|+.+++... ++.++||.+.++. +.... ....+...+..++++++++++++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 57889999999999888642 3435566554553 22110 11123456899999999887766543 5789
Q ss_pred EEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEE-EEee---CCCeEEEEEcCCCeeeeeeeccC
Q 015438 194 HIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL-VAGS---SDDCIYVYDLEANKLSLRILAHT 269 (407)
Q Consensus 194 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~---~dg~i~i~d~~~~~~~~~~~~~~ 269 (407)
.+||+.+++.......... ...+...+..+++++++..+ ++.. .++.|.+||+.+++....+..|.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~----------~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~ 165 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPP----------ITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYP 165 (343)
T ss_dssp EEEETTTTEEEEEEECCTT----------TSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCT
T ss_pred EEEECCCCeEEEEEECChh----------hcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCC
Confidence 9999998875443322110 00122346789999865555 4444 57899999998877655443211
Q ss_pred -----------------------------CCeEEEEecCCCCCEEEEEeCCC-cEEEEeCcccCC----CCceee--eec
Q 015438 270 -----------------------------SDVNTVCFGDESGHLIYSGSDDN-LCKVWDRRCLNV----KGKPAG--VLM 313 (407)
Q Consensus 270 -----------------------------~~v~~i~~s~~~~~~l~s~~~d~-~i~vwd~~~~~~----~~~~~~--~~~ 313 (407)
..+..|+|+ ++++.|+.+..++ .+..++...... ..+... ...
T Consensus 166 ~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s-~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (343)
T 2qe8_A 166 GIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLD-AENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERY 244 (343)
T ss_dssp TTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEEC-TTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE
T ss_pred cccccccceeECCEEEEeccCCCceeceecccceeEec-cCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEec
Confidence 235789998 6888787777665 555554321100 000000 112
Q ss_pred cccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCCCC
Q 015438 314 GHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPC 381 (407)
Q Consensus 314 ~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 381 (407)
++......++++++|+++++...++.|.+||..+++.. .+.. .........++|.++++++.+..
T Consensus 245 g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~-~~~~--~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 245 SEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYK-LLVT--DEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp EECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEE-EEEE--CGGGSCEEEEEECTTSCEEEEEC
T ss_pred ccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEE-EEEE--CCceecCCeeEECCCCcEEEEeC
Confidence 34445678999999999999999999999998444321 1111 11133356788888887765543
No 216
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.29 E-value=6.9e-10 Score=98.31 Aligned_cols=195 Identities=14% Similarity=0.033 Sum_probs=127.8
Q ss_pred CcccccCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccc-cceEEEEEEECCCCCeEEE----EeC--
Q 015438 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKS-LRWTVTDTSLSPDQRHLVY----ASM-- 189 (407)
Q Consensus 117 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~----~~~-- 189 (407)
...+..+...+..++++++|+++++...++.|.+|+.+ +........... ....+.++.+.|+|+++++ |..
T Consensus 78 ~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~ 156 (305)
T 3dr2_A 78 VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKP 156 (305)
T ss_dssp EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCG
T ss_pred EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccc
Confidence 34455567789999999999977766566889999986 432211111111 1123677999999998876 332
Q ss_pred -----------CCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCC------CeEE
Q 015438 190 -----------SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD------DCIY 252 (407)
Q Consensus 190 -----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------g~i~ 252 (407)
.+.|..||..+++..... .. .....++|+|+++.|+++... +.|+
T Consensus 157 ~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---~~---------------~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~ 218 (305)
T 3dr2_A 157 SQGCPADPELAHHSVYRLPPDGSPLQRMA---DL---------------DHPNGLAFSPDEQTLYVSQTPEQGHGSVEIT 218 (305)
T ss_dssp GGSCCCCCSSSCEEEEEECSSSCCCEEEE---EE---------------SSEEEEEECTTSSEEEEEECCC---CCCEEE
T ss_pred ccccccccccCCCeEEEEcCCCCcEEEEe---cC---------------CCCcceEEcCCCCEEEEEecCCcCCCCCEEE
Confidence 256777777666543321 10 135779999999988777655 6899
Q ss_pred EEEcCCCeee--eee-eccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCC
Q 015438 253 VYDLEANKLS--LRI-LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGR 329 (407)
Q Consensus 253 i~d~~~~~~~--~~~-~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 329 (407)
+||+..+... ..+ ....+....+++. ++|++.++ +.+ .|.+||. .++.+..+..+. .+..++|+++++
T Consensus 219 ~~~~~~~~l~~~~~~~~~~~~~pdgi~~d-~~G~lwv~-~~~-gv~~~~~-----~g~~~~~~~~~~-~~~~~~f~~d~~ 289 (305)
T 3dr2_A 219 AFAWRDGALHDRRHFASVPDGLPDGFCVD-RGGWLWSS-SGT-GVCVFDS-----DGQLLGHIPTPG-TASNCTFDQAQQ 289 (305)
T ss_dssp EEEEETTEEEEEEEEECCSSSCCCSEEEC-TTSCEEEC-CSS-EEEEECT-----TSCEEEEEECSS-CCCEEEECTTSC
T ss_pred EEEecCCCccCCeEEEECCCCCCCeEEEC-CCCCEEEe-cCC-cEEEECC-----CCCEEEEEECCC-ceeEEEEeCCCC
Confidence 9998765411 111 1123445678886 78885544 444 5999997 466666665444 588999999998
Q ss_pred EEEEEeCCCc
Q 015438 330 YLISNGKDQA 339 (407)
Q Consensus 330 ~l~s~~~dg~ 339 (407)
.|..++.++.
T Consensus 290 ~L~it~~~~l 299 (305)
T 3dr2_A 290 RLFITGGPCL 299 (305)
T ss_dssp EEEEEETTEE
T ss_pred EEEEEcCCeE
Confidence 8888876543
No 217
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.27 E-value=4.2e-10 Score=101.46 Aligned_cols=237 Identities=13% Similarity=0.126 Sum_probs=150.9
Q ss_pred EEEECCCCCEEEEEe----------CCCeEEEEEcCCCeEEeEeeeccc----cceEEEEEEECCCCCeEEEEeC--CCe
Q 015438 129 VSQFSADGSLFVAGF----------QASQIRIYDVERGWKIQKDILAKS----LRWTVTDTSLSPDQRHLVYASM--SPI 192 (407)
Q Consensus 129 ~~~~s~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~----~~~~v~~~~~sp~~~~l~~~~~--dg~ 192 (407)
.++++|||++++++. .++.|.+||..+.+.+..+....+ .......+.|+|||++++++.. ++.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 399999999887765 357899999999876665543321 0112456899999999998864 689
Q ss_pred EEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCC-Ceeeeeeecc---
Q 015438 193 VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA-NKLSLRILAH--- 268 (407)
Q Consensus 193 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~--- 268 (407)
|.++|+.+++....+.... . ...+....+.+++.+.||.+.+.++.+ ++.......+
T Consensus 162 VsVID~~t~~vv~tI~v~g------------------~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~ 222 (386)
T 3sjl_D 162 VGVVDLEGKAFKRMLDVPD------------------C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHP 222 (386)
T ss_dssp EEEEETTTTEEEEEEECCS------------------E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSC
T ss_pred EEEEECCCCcEEEEEECCC------------------c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecc
Confidence 9999999998765543321 1 112222334566667777777777765 4432211111
Q ss_pred -CCCeE-EEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeec----------cccCCeEEEEecCCCCEEEEEeC
Q 015438 269 -TSDVN-TVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLM----------GHLEGITFIDSRGDGRYLISNGK 336 (407)
Q Consensus 269 -~~~v~-~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~----------~~~~~i~~~~~s~~~~~l~s~~~ 336 (407)
..++. ...|.++++++++ .+.+|.|.+.|+... ..+.+..+. .....+..++++++++.|+....
T Consensus 223 ~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~--~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~ 299 (386)
T 3sjl_D 223 EDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSG--DAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVD 299 (386)
T ss_dssp TTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTS--SCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEE
T ss_pred ccccccccceeEcCCCcEEE-EeCCCEEEEEECCCC--cceeecceeccccccccccccCCCcceeeECCCCCeEEEEec
Confidence 12221 2455446776554 566899999998621 111222221 01234456788999988877642
Q ss_pred ----------CCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCC-ccCC--CCCcceEEEeCCc
Q 015438 337 ----------DQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQAR-DLKH--PCDQSVATYKGHS 392 (407)
Q Consensus 337 ----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~--~~~~~v~~~~gh~ 392 (407)
.+.|.+.|+.+++.+..+..+ ..+..+.++++++ +|.+ ..++.|.+|+..+
T Consensus 300 ~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-----~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t 363 (386)
T 3sjl_D 300 QRDEWRHKTASRFVVVLDAKTGERLAKFEMG-----HEIDSINVSQDEKPLLYALSTGDKTLYIHDAES 363 (386)
T ss_dssp ECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-----EEECEEEECSSSSCEEEEEETTTTEEEEEETTT
T ss_pred cccccccCCCCCEEEEEECCCCeEEEEEECC-----CCcceEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 257999999999887765332 2456789999986 4433 4478899998765
No 218
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.25 E-value=2.3e-09 Score=98.98 Aligned_cols=197 Identities=12% Similarity=0.120 Sum_probs=132.7
Q ss_pred EEECCCCCEEEEEeCCC--eEEEEEcCCCeEEeEeeec-cccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCceecc
Q 015438 130 SQFSADGSLFVAGFQAS--QIRIYDVERGWKIQKDILA-KSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESL 206 (407)
Q Consensus 130 ~~~s~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~ 206 (407)
++|+|+++.|+++..++ .|.+|+...+......-.. ......+.+++++|++..|+++..++.|+.||..++.....
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 89999999998887765 7999998765432222111 11233578899999555566677788999999987653222
Q ss_pred ccccccccceeeeecCCCCcccc--EEEEEEeCC-CCEEEEeeCCCeEEEEEcCCCeeeeeeeccC--------------
Q 015438 207 ANVTEIHDGLDFSAADDGGYSFG--IFSLKFSTD-GRELVAGSSDDCIYVYDLEANKLSLRILAHT-------------- 269 (407)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------- 269 (407)
..... .+.... ...++|+|+ +.++++-..++.|+.|+.... +..+.++.
T Consensus 256 ~~~~~------------~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~ 321 (409)
T 3hrp_A 256 KQLEL------------SGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEAL 321 (409)
T ss_dssp EECCC------------CSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCB
T ss_pred ecccc------------cCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccE
Confidence 11000 001111 128999995 555556667889999997643 22332322
Q ss_pred -CCeEEEEecCCCCCEEEEEe-CCCcEEEEeCcccCCCCceeeeeccc---------------cCCeEEEEecCCCCEEE
Q 015438 270 -SDVNTVCFGDESGHLIYSGS-DDNLCKVWDRRCLNVKGKPAGVLMGH---------------LEGITFIDSRGDGRYLI 332 (407)
Q Consensus 270 -~~v~~i~~s~~~~~~l~s~~-~d~~i~vwd~~~~~~~~~~~~~~~~~---------------~~~i~~~~~s~~~~~l~ 332 (407)
.....++++ ++++++++-+ .++.|+.||+. .+. +..+.++ ......++++++|.+++
T Consensus 322 ~~~P~gia~d-~dG~lyvad~~~~~~I~~~~~~----~G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyV 395 (409)
T 3hrp_A 322 FAQPNGMTVD-EDGNFYIVDGFKGYCLRKLDIL----DGY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWI 395 (409)
T ss_dssp CSSEEEEEEC-TTCCEEEEETTTTCEEEEEETT----TTE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEE
T ss_pred eCCCeEEEEe-CCCCEEEEeCCCCCEEEEEECC----CCE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEE
Confidence 347889997 7888888877 88999999975 444 3444333 24588999999998888
Q ss_pred EEeCCCcEEEEECC
Q 015438 333 SNGKDQAIKLWDIR 346 (407)
Q Consensus 333 s~~~dg~i~iwd~~ 346 (407)
+-..++.|+.++++
T Consensus 396 ad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 396 AEAWGKAIRKYAVE 409 (409)
T ss_dssp EESTTCEEEEEEEC
T ss_pred EECCCCeEEEEEeC
Confidence 88888999988763
No 219
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.24 E-value=1.6e-09 Score=99.32 Aligned_cols=236 Identities=11% Similarity=-0.004 Sum_probs=144.8
Q ss_pred CCCCEEEEEeCC-----CeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEe----------CCCeEEEEEC
Q 015438 134 ADGSLFVAGFQA-----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS----------MSPIVHIVDV 198 (407)
Q Consensus 134 ~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~----------~dg~i~vwd~ 198 (407)
++++.+++.... +.|.++|..+.+.+..+..... + .+.++||+++|+++. .++.|.++|.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~---P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~ 156 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFL---P--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDP 156 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSS---C--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCC---C--ceEECCCCCEEEEEeccccccccCCCCCEEEEEEC
Confidence 466666655442 6999999999877766554432 3 799999999998876 3678999999
Q ss_pred CCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC--CCeEEEEEcCCCeeeeeeeccCC------
Q 015438 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS--DDCIYVYDLEANKLSLRILAHTS------ 270 (407)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~------ 270 (407)
.+.+......+..... +. .......+.|+|||++++++.. ++.|.+.|+.+++.+..+.....
T Consensus 157 ~t~~vv~~I~v~g~~r---~~------~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~ 227 (426)
T 3c75_H 157 VTFLPIADIELPDAPR---FL------VGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPA 227 (426)
T ss_dssp TTCCEEEEEEETTCCC---CC------BSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEE
T ss_pred CCCcEEEEEECCCccc---cc------cCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccC
Confidence 9988765544320000 00 0001235789999999998874 57899999999998877653211
Q ss_pred -CeEEEEecCCCCCEEEEE-------------------------------------eCCCcEEEEeCcccCCCCce--ee
Q 015438 271 -DVNTVCFGDESGHLIYSG-------------------------------------SDDNLCKVWDRRCLNVKGKP--AG 310 (407)
Q Consensus 271 -~v~~i~~s~~~~~~l~s~-------------------------------------~~d~~i~vwd~~~~~~~~~~--~~ 310 (407)
.-..+.++ +++.+++.. +..+.|.+.|.. .... +.
T Consensus 228 g~~~~v~~~-~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~----~~~~~v~~ 302 (426)
T 3c75_H 228 SPTVFYMNC-RDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLT----AEGATFRA 302 (426)
T ss_dssp ETTEEEEEE-TTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEEC----SSCEEECC
T ss_pred CCcEEEEEc-CCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEecc----CCceEEee
Confidence 00112232 233333222 223334444432 1100 00
Q ss_pred eec----------cccCCeEEEEecCCCCEEEEEeC----------CCcEEEEECCCCCCcccccCCCccccccceeeeC
Q 015438 311 VLM----------GHLEGITFIDSRGDGRYLISNGK----------DQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDY 370 (407)
Q Consensus 311 ~~~----------~~~~~i~~~~~s~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~ 370 (407)
.+. ........++++|+++.+++... ++.|.++|+.+.+.+.++..+ .....+.|
T Consensus 303 ~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-----~~P~gia~ 377 (426)
T 3c75_H 303 PIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-----HEIDSINV 377 (426)
T ss_dssp CEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-----EEECEEEE
T ss_pred eeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-----CCcCeEEE
Confidence 000 00111223688999887776542 357999999999887765321 23567889
Q ss_pred CCCCC-ccCCCC--CcceEEEeCCcc
Q 015438 371 PPQAR-DLKHPC--DQSVATYKGHSV 393 (407)
Q Consensus 371 ~~~~~-~l~~~~--~~~v~~~~gh~~ 393 (407)
+|+++ ++.+.+ ++.|.+++..+.
T Consensus 378 spDg~~~lyv~n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 378 SQDAEPLLYALSAGTQTLHIYDAATG 403 (426)
T ss_dssp CCSSSCEEEEEETTTTEEEEEETTTC
T ss_pred ccCCCEEEEEEcCCCCeEEEEECCCC
Confidence 99998 666554 789999987653
No 220
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.18 E-value=1.3e-09 Score=100.05 Aligned_cols=220 Identities=19% Similarity=0.215 Sum_probs=141.9
Q ss_pred EEEECCCCCEEEEEe----------CCCeEEEEEcCCCeEEeEeeec-cc---cceEEEEEEECCCCCeEEEEeC--CCe
Q 015438 129 VSQFSADGSLFVAGF----------QASQIRIYDVERGWKIQKDILA-KS---LRWTVTDTSLSPDQRHLVYASM--SPI 192 (407)
Q Consensus 129 ~~~~s~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~-~~---~~~~v~~~~~sp~~~~l~~~~~--dg~ 192 (407)
.++++|||++++++. .++.|.++|..+.+.+..+... .. .......+.|+||+++++++.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 799999999888775 3678999999998766554432 00 0112446899999999999874 578
Q ss_pred EEEEECCCCceeccccccccc----cc-ee-eeecCCCC------ccccE----------------EEEEEeCCCCEEEE
Q 015438 193 VHIVDVGSGTMESLANVTEIH----DG-LD-FSAADDGG------YSFGI----------------FSLKFSTDGRELVA 244 (407)
Q Consensus 193 i~vwd~~~~~~~~~~~~~~~~----~~-~~-~~~~~~~~------~~~~v----------------~~~~~s~~~~~l~~ 244 (407)
|.+.|+.+++....+...... .+ .. +....++. ....+ ..+.+.+++..++.
T Consensus 202 VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~ 281 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVW 281 (426)
T ss_dssp EEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEE
Confidence 999999998876554432110 00 00 00000000 00011 12356777777766
Q ss_pred eeCCCeEEEEEcCCCeee--eeeec----------cCCCeEEEEecCCCCCEEEEEeC----------CCcEEEEeCccc
Q 015438 245 GSSDDCIYVYDLEANKLS--LRILA----------HTSDVNTVCFGDESGHLIYSGSD----------DNLCKVWDRRCL 302 (407)
Q Consensus 245 ~~~dg~i~i~d~~~~~~~--~~~~~----------~~~~v~~i~~s~~~~~~l~s~~~----------d~~i~vwd~~~~ 302 (407)
.+..+.|++.|+...... ..+.. .......++++ ++++.+++... .+.|.++|..
T Consensus 282 ~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s-~dg~rlyVa~~~~~~gthk~~s~~VsVID~~-- 358 (426)
T 3c75_H 282 PTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYH-RQSDRIYLLVDQRDEWKHKAASRFVVVLNAE-- 358 (426)
T ss_dssp EBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEE-GGGTEEEEEEEECCTTCTTSCEEEEEEEETT--
T ss_pred EeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEc-CCCCEEEEEecccccccccCCCCEEEEEECC--
Confidence 677888999998655421 11110 11222336887 55555555431 3579999998
Q ss_pred CCCCceeeeeccccCCeEEEEecCCCC-EEEEEe-CCCcEEEEECCCCCCcccc
Q 015438 303 NVKGKPAGVLMGHLEGITFIDSRGDGR-YLISNG-KDQAIKLWDIRKMSSNASC 354 (407)
Q Consensus 303 ~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~ 354 (407)
+.+.+..+.. ......++|+|||+ +++++. .++.|.++|+.+.+.+.++
T Consensus 359 --T~kvv~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 359 --TGERINKIEL-GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp --TCCEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred --CCeEEEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 7788877753 23578999999999 888887 5999999999998877653
No 221
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.17 E-value=7.6e-12 Score=114.05 Aligned_cols=189 Identities=11% Similarity=-0.040 Sum_probs=105.1
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCceecccccccccc
Q 015438 135 DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHD 214 (407)
Q Consensus 135 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 214 (407)
++..+++++.|+.|+.||..+|+.+..... ..+.+..+..++..+++++.|+.|+.||..+++...........
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-----~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~- 81 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-----DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPE- 81 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-----CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHH-
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-----CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcc-
Confidence 577899999999999999999977766443 13444445567778888889999999999887654322211000
Q ss_pred ceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcE
Q 015438 215 GLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLC 294 (407)
Q Consensus 215 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i 294 (407)
.. ...++ +. .+..+++++.++.|+.||.++++.+..+..+. ...++| ++..+++++.|+.|
T Consensus 82 ~~---------~~sp~----~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p-~~~~v~~~~~dg~v 142 (369)
T 2hz6_A 82 LV---------QASPC----RS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSP-STSLLYLGRTEYTI 142 (369)
T ss_dssp HH---------TTCSC----C------CCCCEEEEEEEEECCC---------------------------EEEEEEEEEE
T ss_pred cc---------ccCce----Ee-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccc-cCCEEEEEecCCEE
Confidence 00 00011 11 34467888889999999999999877665443 234554 67788899999999
Q ss_pred EEEeCcccCCCCceeeeeccccCCeEEEEecCCC---CEEEEEeCCCcEEEEECCCCCCcccc
Q 015438 295 KVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDG---RYLISNGKDQAIKLWDIRKMSSNASC 354 (407)
Q Consensus 295 ~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~ 354 (407)
+.||.+ +++.+..+..+. ....++.++. ..+++++.||.|..||.++++.+...
T Consensus 143 ~a~d~~----tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 199 (369)
T 2hz6_A 143 TMYDTK----TRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQ 199 (369)
T ss_dssp ECCCSS----SSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEE
T ss_pred EEEECC----CCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEe
Confidence 999998 666655443221 1223344432 45777889999999999998765543
No 222
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.16 E-value=5.9e-09 Score=94.73 Aligned_cols=234 Identities=14% Similarity=0.041 Sum_probs=143.5
Q ss_pred EEC--CCCCEEEEE-eCCCeEEEEEcCCC---eEEeEeee----c-cccceEEEEEEECCCCCeEEEEeCC------CeE
Q 015438 131 QFS--ADGSLFVAG-FQASQIRIYDVERG---WKIQKDIL----A-KSLRWTVTDTSLSPDQRHLVYASMS------PIV 193 (407)
Q Consensus 131 ~~s--~~~~~l~~~-~~dg~i~iwd~~~~---~~~~~~~~----~-~~~~~~v~~~~~sp~~~~l~~~~~d------g~i 193 (407)
.++ +++++|++. ..++.|.|+|+.+. -++...+. . +........+..+|++ .++++..+ +.|
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 346 788887765 45788999998653 12222221 0 1111245667788999 66665444 789
Q ss_pred EEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEee-------------------CCCeEEEE
Q 015438 194 HIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-------------------SDDCIYVY 254 (407)
Q Consensus 194 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-------------------~dg~i~i~ 254 (407)
.++|..+.+............ .--..+-|+|+++.+++.. .+.+|.+|
T Consensus 167 ~vlD~~T~~v~~~~~~~~~~~-------------~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~ 233 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRGDQ-------------YLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFW 233 (462)
T ss_dssp EEECTTTCCEEEECCSBCTTC-------------CCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEE
T ss_pred EEEECCCCeEEEEEccCCCCc-------------cccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEE
Confidence 999999988766554322111 1123578899999888874 36889999
Q ss_pred EcCCCeeeeeeeccC--CCeEEEEe--cCCCCCEEEEEe------CCCcEEEEeCcccCCCCceeeee--cc--------
Q 015438 255 DLEANKLSLRILAHT--SDVNTVCF--GDESGHLIYSGS------DDNLCKVWDRRCLNVKGKPAGVL--MG-------- 314 (407)
Q Consensus 255 d~~~~~~~~~~~~~~--~~v~~i~~--s~~~~~~l~s~~------~d~~i~vwd~~~~~~~~~~~~~~--~~-------- 314 (407)
|+.+++.+.++.... .....+.| + ++++++++++ .+++|.+|..... ..+..+.+ ..
T Consensus 234 D~~~~k~~~tI~vg~~g~~P~~i~f~~~-Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g--~~~~~~vIdi~~~~v~~~lp 310 (462)
T 2ece_A 234 DLRKRKRIHSLTLGEENRMALELRPLHD-PTKLMGFINMVVSLKDLSSSIWLWFYEDG--KWNAEKVIEIPAEPLEGNLP 310 (462)
T ss_dssp ETTTTEEEEEEESCTTEEEEEEEEECSS-TTCCEEEEEEEEETTTCCEEEEEEEEETT--EEEEEEEEEECCEECCSSCC
T ss_pred ECCCCcEeeEEecCCCCCccceeEeeEC-CCCCEEEEEEeeeccCCCceEEEEEecCC--ceeEEEEEeCCCcccccccc
Confidence 999998888776531 23345555 7 6777776666 5668877665410 11111111 00
Q ss_pred --------ccCCeEEEEecCCCCEEEEEeC-CCcEEEEECCCCC---CcccccCCCc--c----ccc----cceeeeCCC
Q 015438 315 --------HLEGITFIDSRGDGRYLISNGK-DQAIKLWDIRKMS---SNASCNLGFR--S----YEW----DYRWMDYPP 372 (407)
Q Consensus 315 --------~~~~i~~~~~s~~~~~l~s~~~-dg~i~iwd~~~~~---~~~~~~~~~~--~----~~~----~v~~~~~~~ 372 (407)
-...+..+.+++||++|.++.. .+.|.+||+.... .+..+..+-. . ... .-+.+.++|
T Consensus 311 ~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSp 390 (462)
T 2ece_A 311 EILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISR 390 (462)
T ss_dssp GGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECT
T ss_pred ccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcC
Confidence 0234688999999999988775 7899999996332 2222211100 0 001 247788999
Q ss_pred CCCccCCCC
Q 015438 373 QARDLKHPC 381 (407)
Q Consensus 373 ~~~~l~~~~ 381 (407)
+|+.|.+++
T Consensus 391 DGk~LyVaN 399 (462)
T 2ece_A 391 DGRRVYVTN 399 (462)
T ss_dssp TSSEEEEEC
T ss_pred CCCEEEEEc
Confidence 998777655
No 223
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.14 E-value=1e-08 Score=92.30 Aligned_cols=217 Identities=9% Similarity=0.057 Sum_probs=134.9
Q ss_pred cCCCceEEEEECCCCCEEEEEeC-----CCeEEEEEcCCCeEEeEeeecc---ccceEEEEEEECCCCCeE-EEEe---C
Q 015438 122 QTTSRAYVSQFSADGSLFVAGFQ-----ASQIRIYDVERGWKIQKDILAK---SLRWTVTDTSLSPDQRHL-VYAS---M 189 (407)
Q Consensus 122 ~h~~~v~~~~~s~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~---~~~~~v~~~~~sp~~~~l-~~~~---~ 189 (407)
+|-..+.+++++++|+++++-.. +..|.+||+.+++.+....... .+...+..++++|++..+ ++.. .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 56678999999999987766543 5789999999886444432211 122346789999865444 4444 5
Q ss_pred CCeEEEEECCCCceeccccc--cccc-------cceeeeecCCCC----ccccEEEEEEeCCCCEEEEeeCCC-eEEEEE
Q 015438 190 SPIVHIVDVGSGTMESLANV--TEIH-------DGLDFSAADDGG----YSFGIFSLKFSTDGRELVAGSSDD-CIYVYD 255 (407)
Q Consensus 190 dg~i~vwd~~~~~~~~~~~~--~~~~-------~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~dg-~i~i~d 255 (407)
++.|.+||+.+++....... .... .+..+......+ ....+..|+|+|+++.|+++...+ .++.++
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 78999999987765443321 0000 011111000000 012468899999999888887665 566665
Q ss_pred cC---CCe-----eee--eeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeecc-ccCCeEEEEe
Q 015438 256 LE---ANK-----LSL--RILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMG-HLEGITFIDS 324 (407)
Q Consensus 256 ~~---~~~-----~~~--~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~-~~~~i~~~~~ 324 (407)
.. .+. ... ...++.+....+++. ++++++++...++.|.+||.. .++....... +...+++++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d-~~G~l~va~~~~~~V~~~d~~----~G~~~~~~~~~~~~~p~~va~ 298 (343)
T 2qe8_A 224 SADLSNLQLTDAELGSKIERYSEKPICDGISID-KDHNIYVGDLAHSAIGVITSA----DRAYKLLVTDEKLSWTDSFNF 298 (343)
T ss_dssp HHHHTCTTCCHHHHHTTCEEEEECCSCSCEEEC-TTCCEEEEEGGGTEEEEEETT----TTEEEEEEECGGGSCEEEEEE
T ss_pred HHHhcCCCCChhhhhcceEecccCCCCceEEEC-CCCCEEEEccCCCeEEEEECC----CCCEEEEEECCceecCCeeEE
Confidence 42 111 000 112344556779997 789999998889999999984 3433222221 2456899999
Q ss_pred cCCCCEEEEEeCCCcEEEE
Q 015438 325 RGDGRYLISNGKDQAIKLW 343 (407)
Q Consensus 325 s~~~~~l~s~~~dg~i~iw 343 (407)
.++++++++.+..+.+.+|
T Consensus 299 ~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 299 GSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp CTTSCEEEEECCGGGSGGG
T ss_pred CCCCcEEEEeCcccccccc
Confidence 9999888887755444333
No 224
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.14 E-value=3.3e-08 Score=84.44 Aligned_cols=195 Identities=13% Similarity=0.083 Sum_probs=134.5
Q ss_pred eEEEEECCCCCEEEEEeC--CCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEE-EeCCCeEEEEECCCCce
Q 015438 127 AYVSQFSADGSLFVAGFQ--ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVY-ASMSPIVHIVDVGSGTM 203 (407)
Q Consensus 127 v~~~~~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~dg~i~vwd~~~~~~ 203 (407)
...++|++++.++++.+. ++.|.++|+.+++.+......... ....+++. ++.|.. .-.++.+.++|..+.+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~--fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSY--FGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTC--CEEEEEEE--TTEEEEEETTCSEEEEEETTTTEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCc--ceEEEEEe--CCEEEEEEecCCEEEEEECCCCcE
Confidence 579999998765555543 579999999999766654432211 12244554 445554 44678999999998876
Q ss_pred eccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccC-----CCeEEEEec
Q 015438 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHT-----SDVNTVCFG 278 (407)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~v~~i~~s 278 (407)
...+... .. + . ..+++||+.++++..++.|.++|..+.+.+..+.... ..++.+.|.
T Consensus 99 ~~~i~~g-~~------------~--g---~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~ 160 (266)
T 2iwa_A 99 IKNFTHQ-MK------------D--G---WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI 160 (266)
T ss_dssp EEEEECC-SS------------S--C---CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred EEEEECC-CC------------C--e---EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE
Confidence 6544322 00 1 1 2355678777777778899999999998887776332 236788886
Q ss_pred CCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccc-------------cCCeEEEEecCCCCE-EEEEeCCCcEEEEE
Q 015438 279 DESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGH-------------LEGITFIDSRGDGRY-LISNGKDQAIKLWD 344 (407)
Q Consensus 279 ~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~-------------~~~i~~~~~s~~~~~-l~s~~~dg~i~iwd 344 (407)
++.+++....++.|.+.|.. +++.+..+.-. ......++|+|+++. ++++...+.|.+.+
T Consensus 161 --dg~lyvn~~~~~~V~vID~~----tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~ 234 (266)
T 2iwa_A 161 --NGEVWANIWQTDCIARISAK----DGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIK 234 (266)
T ss_dssp --TTEEEEEETTSSEEEEEETT----TCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred --CCEEEEecCCCCeEEEEECC----CCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEE
Confidence 56666565567899999998 77777776521 024689999999865 55566788999999
Q ss_pred CCCCC
Q 015438 345 IRKMS 349 (407)
Q Consensus 345 ~~~~~ 349 (407)
+....
T Consensus 235 l~~~~ 239 (266)
T 2iwa_A 235 LHLVR 239 (266)
T ss_dssp EEECC
T ss_pred Eeccc
Confidence 88754
No 225
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.07 E-value=4.9e-09 Score=94.55 Aligned_cols=213 Identities=13% Similarity=0.068 Sum_probs=131.3
Q ss_pred EEEECCCCCEEEEEe----------CCCeEEEEEcCCCeEEeEeeecccc----ceEEEEEEECCCCCeEEEEeC--CCe
Q 015438 129 VSQFSADGSLFVAGF----------QASQIRIYDVERGWKIQKDILAKSL----RWTVTDTSLSPDQRHLVYASM--SPI 192 (407)
Q Consensus 129 ~~~~s~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~~----~~~v~~~~~sp~~~~l~~~~~--dg~ 192 (407)
.+.++|||++++++. .++.|.+||+.+++.+..+...... ......+.++||+++++++.. +..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 799999999988886 3688999999998777665432100 012456899999999999874 467
Q ss_pred EEE--EECCCCceecccccccc----ccc-eeee----------ecCCC-----C------------ccccEEEEEEeCC
Q 015438 193 VHI--VDVGSGTMESLANVTEI----HDG-LDFS----------AADDG-----G------------YSFGIFSLKFSTD 238 (407)
Q Consensus 193 i~v--wd~~~~~~~~~~~~~~~----~~~-~~~~----------~~~~~-----~------------~~~~v~~~~~s~~ 238 (407)
+.+ +|+.+ . ........ ..+ ..+. ..... + ...+. . .++
T Consensus 149 v~V~~iD~~t--v-~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~ 221 (368)
T 1mda_H 149 AGLSVPGASD--D-QLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANY 221 (368)
T ss_dssp EEEEETTTEE--E-EEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETT
T ss_pred EEEEEEchhh--c-eEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-ccc
Confidence 888 88865 1 11111000 000 0000 00000 0 00111 2 555
Q ss_pred CCEEEEeeCCCeEEEEEcCCCe--eeeeeec----------cCCCeEEEEecCCCCCEEEEEeC---------CCcEEEE
Q 015438 239 GRELVAGSSDDCIYVYDLEANK--LSLRILA----------HTSDVNTVCFGDESGHLIYSGSD---------DNLCKVW 297 (407)
Q Consensus 239 ~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~----------~~~~v~~i~~s~~~~~~l~s~~~---------d~~i~vw 297 (407)
+..++..+. +.|.+.|+.+.. .+..+.. .......+.++ ++++.++.+.. ++.+.++
T Consensus 222 ~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s-~dg~~lyV~~~~~~~~~~~~~~~~~Vi 299 (368)
T 1mda_H 222 PGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKL-KNTDGIMILTVEHSRSCLAAAENTSSV 299 (368)
T ss_dssp TTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEE-TTTTEEEEEEEECSSCTTSCEEEEEEE
T ss_pred CCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEc-CCCCEEEEEeccccCcccccCCCEEEE
Confidence 666666666 889999986542 2222211 01112226788 56666655432 2356699
Q ss_pred eCcccCCCCceeeeeccccCCeEEEEecCCCC-EEEEEe-CCCcEEEEECCCCCCccccc
Q 015438 298 DRRCLNVKGKPAGVLMGHLEGITFIDSRGDGR-YLISNG-KDQAIKLWDIRKMSSNASCN 355 (407)
Q Consensus 298 d~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~~ 355 (407)
|+. +.+.+..+.... ....++|+|||+ .+++.. .++.|.++|+.+++.+.++.
T Consensus 300 D~~----t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~ 354 (368)
T 1mda_H 300 TAS----VGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354 (368)
T ss_dssp ESS----SCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECC
T ss_pred ECC----CCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEE
Confidence 998 777777765333 578999999997 456666 59999999999998876654
No 226
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.06 E-value=1.2e-08 Score=100.83 Aligned_cols=195 Identities=10% Similarity=0.074 Sum_probs=124.2
Q ss_pred EEEEECCCCCEEEEEeCCC-------------eEEEEEcCCCeEEeE-eeeccc-cceEEEEEEECCCCCeEEEEeC---
Q 015438 128 YVSQFSADGSLFVAGFQAS-------------QIRIYDVERGWKIQK-DILAKS-LRWTVTDTSLSPDQRHLVYASM--- 189 (407)
Q Consensus 128 ~~~~~s~~~~~l~~~~~dg-------------~i~iwd~~~~~~~~~-~~~~~~-~~~~v~~~~~sp~~~~l~~~~~--- 189 (407)
..++|+ ||+.|+.+..+. .|++|++.++..... ...... +...+..+.|+||+++|+....
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 577899 999999888774 399999877532111 122222 3334678999999998876542
Q ss_pred -CCeEEEEECCCCc--eeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC----CCeEEEEEcCCCee-
Q 015438 190 -SPIVHIVDVGSGT--MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS----DDCIYVYDLEANKL- 261 (407)
Q Consensus 190 -dg~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----dg~i~i~d~~~~~~- 261 (407)
...|+++|+.++. ...+.. +....... |+++|..|+..+. .+.|..+|+.++..
T Consensus 257 ~~~~i~~~d~~~~~~~~~~l~~-----------------~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~ 318 (693)
T 3iuj_A 257 SGNRLYVKDLSQENAPLLTVQG-----------------DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPA 318 (693)
T ss_dssp SCCEEEEEETTSTTCCCEEEEC-----------------SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGG
T ss_pred CCcEEEEEECCCCCCceEEEeC-----------------CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcc
Confidence 3589999997763 221111 11123333 6666766555443 36799999987654
Q ss_pred -eeeeeccCCCeEEEEecCCCCCEEEEEe-CCC--cEEEEeCcccCCCCceeeeec-cccCCeEEEEecCCCCEEEEEeC
Q 015438 262 -SLRILAHTSDVNTVCFGDESGHLIYSGS-DDN--LCKVWDRRCLNVKGKPAGVLM-GHLEGITFIDSRGDGRYLISNGK 336 (407)
Q Consensus 262 -~~~~~~~~~~v~~i~~s~~~~~~l~s~~-~d~--~i~vwd~~~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~s~~~ 336 (407)
...+..|...+. .|+ ++++.|+... .++ .|++||+. +.....+. .....+..+.+++++..|+....
T Consensus 319 ~~~~l~~~~~~~~--~~s-~~g~~lv~~~~~~g~~~l~~~d~~-----g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~s 390 (693)
T 3iuj_A 319 HWRDLIPERQQVL--TVH-SGSGYLFAEYMVDATARVEQFDYE-----GKRVREVALPGLGSVSGFNGKHDDPALYFGFE 390 (693)
T ss_dssp GCEEEECCCSSCE--EEE-EETTEEEEEEEETTEEEEEEECTT-----SCEEEEECCSSSSEEEECCCCTTCSCEEEEEE
T ss_pred ccEEEecCCCCEE--EEE-EECCEEEEEEEECCeeEEEEEECC-----CCeeEEeecCCCceEEeeecCCCCCEEEEEec
Confidence 344556666655 777 5566665554 444 68889885 33344443 23445777888888877765554
Q ss_pred C----CcEEEEECCCCC
Q 015438 337 D----QAIKLWDIRKMS 349 (407)
Q Consensus 337 d----g~i~iwd~~~~~ 349 (407)
+ ++|..||+.+++
T Consensus 391 s~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 391 NYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp CSSSCCEEEEECTTTCC
T ss_pred CCCCCCEEEEEECCCCe
Confidence 4 789999998764
No 227
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.01 E-value=8.6e-08 Score=80.88 Aligned_cols=180 Identities=15% Similarity=0.105 Sum_probs=123.6
Q ss_pred eEEEEECCCCCEEEEEeCCC--eEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEE-eCCCeEEEEECCCCce
Q 015438 127 AYVSQFSADGSLFVAGFQAS--QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVDVGSGTM 203 (407)
Q Consensus 127 v~~~~~s~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~dg~i~vwd~~~~~~ 203 (407)
...+.|+ ++.++.+++.+| .|+++|+.+++.+......... ---.+++ +++.|... -.++.+.+||..+.+.
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~--FgeGit~--~g~~ly~ltw~~~~v~v~D~~t~~~ 119 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRY--FGEGISD--WKDKIVGLTWKNGLGFVWNIRNLRQ 119 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTC--CEEEEEE--ETTEEEEEESSSSEEEEEETTTCCE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCcc--ceeEEEE--eCCEEEEEEeeCCEEEEEECccCcE
Confidence 4788998 677777777766 8999999999777665433221 0122333 34455554 4688999999999887
Q ss_pred eccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccC-----CCeEEEEec
Q 015438 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHT-----SDVNTVCFG 278 (407)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~v~~i~~s 278 (407)
...+.... ....++++++.|+....++.|+++|..+.+.+..+.... ..++.+.|.
T Consensus 120 ~~ti~~~~-------------------eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~ 180 (262)
T 3nol_A 120 VRSFNYDG-------------------EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV 180 (262)
T ss_dssp EEEEECSS-------------------CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE
T ss_pred EEEEECCC-------------------CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE
Confidence 66554321 012233567777777667889999999999888776432 334567885
Q ss_pred CCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccc------------cCCeEEEEecCCCCEEEEEeC
Q 015438 279 DESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGH------------LEGITFIDSRGDGRYLISNGK 336 (407)
Q Consensus 279 ~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~------------~~~i~~~~~s~~~~~l~s~~~ 336 (407)
++.+++..-.++.|.+.|.+ +++.+..+.-. ....+.|+|+|+++.|+..++
T Consensus 181 --~G~lyan~w~~~~I~vIDp~----tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 181 --DGEIFANVWQTNKIVRIDPE----TGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp --TTEEEEEETTSSEEEEECTT----TCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred --CCEEEEEEccCCeEEEEECC----CCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 67666666578899999998 77777665421 124589999999888877775
No 228
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.98 E-value=5.5e-07 Score=77.81 Aligned_cols=204 Identities=10% Similarity=0.015 Sum_probs=125.2
Q ss_pred CceEEEEECCCCCEEEEE-eCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEE-eCCCeEEEEECCCCc
Q 015438 125 SRAYVSQFSADGSLFVAG-FQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVDVGSGT 202 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~dg~i~vwd~~~~~ 202 (407)
..+.+++|++++..|+.+ ...+.|.+++++.+.. .... . ........++++|++..|..+ ...+.|.++++....
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~-~-~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~ 112 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP-TTII-R-QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ 112 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-EEEE-C-TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc-EEEE-E-CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC
Confidence 356799999976655544 4578999999876532 2211 1 111247889999976555554 556789999987543
Q ss_pred eeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC---CCeEEEEEcCCCeeeeeee-ccCCCeEEEEec
Q 015438 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS---DDCIYVYDLEANKLSLRIL-AHTSDVNTVCFG 278 (407)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~-~~~~~v~~i~~s 278 (407)
...+... .......++++|++..|+.+.. .+.|..+++.... ...+. ........++++
T Consensus 113 ~~~~~~~----------------~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d 175 (267)
T 1npe_A 113 RRVLFDT----------------GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFD 175 (267)
T ss_dssp CEEEECS----------------SCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEE
T ss_pred EEEEEEC----------------CCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEc
Confidence 2111100 0114678999997666655543 4689999886433 22222 223457889998
Q ss_pred CCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccc
Q 015438 279 DESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASC 354 (407)
Q Consensus 279 ~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 354 (407)
+..+.++++-...+.|.++|.. .......+.+ ......++.. .+..+++....+.|.++|..+++.+..+
T Consensus 176 ~~~~~lyv~d~~~~~I~~~~~~----g~~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i 245 (267)
T 1npe_A 176 AFSSQLCWVDAGTHRAECLNPA----QPGRRKVLEG-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTF 245 (267)
T ss_dssp TTTTEEEEEETTTTEEEEEETT----EEEEEEEEEC-CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEECCCCEEEEEecC----CCceEEEecC-CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEE
Confidence 4345555666667899999986 2222222222 2334567664 3444444446789999999987766554
No 229
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.98 E-value=1.4e-08 Score=95.61 Aligned_cols=226 Identities=10% Similarity=0.000 Sum_probs=140.2
Q ss_pred CCCCEEEEEeC-CCeEEEEEcCCCeEEeEeeeccccceEEEEEEE-C-CCCCeEEEEe------------------CCCe
Q 015438 134 ADGSLFVAGFQ-ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSL-S-PDQRHLVYAS------------------MSPI 192 (407)
Q Consensus 134 ~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-s-p~~~~l~~~~------------------~dg~ 192 (407)
+||++++.... ++.|.+.|+++.+....+....+ ..+..+++ + |+++++++++ .++.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g--~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNA--KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSC--CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCC--CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 38888877665 55799999999865553322221 23677887 5 9999998884 2457
Q ss_pred EEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCC-----------------------
Q 015438 193 VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD----------------------- 249 (407)
Q Consensus 193 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg----------------------- 249 (407)
+.++|..+.+.......... ...++++|+|+++++.+.+.
T Consensus 177 vtvID~~t~~v~~qI~Vgg~-----------------pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~ 239 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSGN-----------------LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIA 239 (595)
T ss_dssp EEEEETTTTEEEEEEEESSC-----------------CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHH
T ss_pred EEEEECCCCeEEEEEEeCCC-----------------ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeecc
Confidence 89999988765444333221 12356777777777766443
Q ss_pred ---------------eEEEEEcCC--Cee-eeeeeccCCCeEEEEecCCCCCEEEEEe-CCCcEEEEeCcccC-------
Q 015438 250 ---------------CIYVYDLEA--NKL-SLRILAHTSDVNTVCFGDESGHLIYSGS-DDNLCKVWDRRCLN------- 303 (407)
Q Consensus 250 ---------------~i~i~d~~~--~~~-~~~~~~~~~~v~~i~~s~~~~~~l~s~~-~d~~i~vwd~~~~~------- 303 (407)
.|.+.|.++ ++. +..+.. .....++.++ ++|+++++++ .+.+|.++|+...+
T Consensus 240 ~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~s-PDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l 317 (595)
T 1fwx_A 240 EIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMA-PDKKHLCVAGKLSPTVTVLDVTRFDAVFYENA 317 (595)
T ss_dssp HHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEEC-TTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC
T ss_pred ceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEc-CCCCEEEEeCCCCCeEEEEECccccccccccc
Confidence 477888887 444 445543 2356789998 7787666655 67899999997220
Q ss_pred -CCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCC----------CCCcccccCCCc-cccccceeeeCC
Q 015438 304 -VKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRK----------MSSNASCNLGFR-SYEWDYRWMDYP 371 (407)
Q Consensus 304 -~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~----------~~~~~~~~~~~~-~~~~~v~~~~~~ 371 (407)
.....+..+. -......++|+|+|...++.-.|+.|.+||+.+ .+.+..+..+.. .+...-....++
T Consensus 318 ~~~~~v~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~ 396 (595)
T 1fwx_A 318 DPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLD 396 (595)
T ss_dssp CGGGGEEECCB-CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTT
T ss_pred CcccceEEEcC-CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeC
Confidence 0001222222 335678999999994444556799999999987 222222211111 111111234568
Q ss_pred CCCCccCCCC
Q 015438 372 PQARDLKHPC 381 (407)
Q Consensus 372 ~~~~~l~~~~ 381 (407)
|||++|.+.+
T Consensus 397 ~DGk~l~~~N 406 (595)
T 1fwx_A 397 ATNDWLVCLS 406 (595)
T ss_dssp CCSSEEEEEE
T ss_pred CCCCEEEEcC
Confidence 8888887543
No 230
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.95 E-value=3.9e-08 Score=88.68 Aligned_cols=229 Identities=7% Similarity=-0.063 Sum_probs=133.6
Q ss_pred EEEEEeCCC----eEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEe----------CCCeEEEEECCCCce
Q 015438 138 LFVAGFQAS----QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS----------MSPIVHIVDVGSGTM 203 (407)
Q Consensus 138 ~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~----------~dg~i~vwd~~~~~~ 203 (407)
.+++...++ .|.++|..+++.+..+..... + .+.++||+++++++. .++.|.+||+.+++.
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~---P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v 108 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFL---S--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP 108 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTT---C--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCC---C--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE
Confidence 344444444 888999999877766554433 3 699999999999886 368899999999987
Q ss_pred eccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC--CCeEEE--EEcCCCeeeeeeecc-----------
Q 015438 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS--DDCIYV--YDLEANKLSLRILAH----------- 268 (407)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~i--~d~~~~~~~~~~~~~----------- 268 (407)
.....+..... +.. ......+.++|||++++++.. +..|.+ +|+.+ +..+...
T Consensus 109 v~~I~v~~~~~---~~~------g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~ 176 (368)
T 1mda_H 109 IADIELPDAPR---FSV------GPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAA 176 (368)
T ss_dssp EEEEEETTSCS---CCB------SCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETT
T ss_pred EEEEECCCccc---ccc------CCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCe
Confidence 66554321000 000 002335899999999998864 467888 99876 2233210
Q ss_pred -------CCCeEEEEe--------------------------cCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeecc-
Q 015438 269 -------TSDVNTVCF--------------------------GDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMG- 314 (407)
Q Consensus 269 -------~~~v~~i~~--------------------------s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~- 314 (407)
.+.+..+.. . +++..++..+. +.|.+.|+... ..+.+..+.-
T Consensus 177 ~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~-~~~~~~~~vs~-~~V~viD~~~~--~~~v~~~~~~~ 252 (368)
T 1mda_H 177 THYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQA-NYPGMLVWAVA-SSILQGDIPAA--GATMKAAIDGN 252 (368)
T ss_dssp EEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEE-TTTTEEEECBS-SCCEEEECCSS--CCEEECCCCSS
T ss_pred EEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcccc-ccCCEEEEEcC-CEEEEEECCCC--cceEEEEEEec
Confidence 001111111 1 11122222223 55556665310 0011111100
Q ss_pred ---------ccCCeEEEEecCCCCEEEEEeC---------CCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCc
Q 015438 315 ---------HLEGITFIDSRGDGRYLISNGK---------DQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARD 376 (407)
Q Consensus 315 ---------~~~~i~~~~~s~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 376 (407)
.......++++|+++.++.+.. ++.+.++|+.+.+.+..+..+ .....+.|+|+++.
T Consensus 253 ~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg-----~~p~gi~~s~Dg~~ 327 (368)
T 1mda_H 253 ESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG-----HDSDAIIAAQDGAS 327 (368)
T ss_dssp CTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE-----EEECEEEECCSSSC
T ss_pred cccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC-----CCcceEEECCCCCE
Confidence 0111122689999988876543 235679999998877655321 14567899999973
Q ss_pred -cCC-C-CCcceEEEeCCc
Q 015438 377 -LKH-P-CDQSVATYKGHS 392 (407)
Q Consensus 377 -l~~-~-~~~~v~~~~gh~ 392 (407)
+.. . .++.|.+++..+
T Consensus 328 l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 328 DNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp EEEEEETTTTEEEEEESSS
T ss_pred EEEEccCCCCeEEEEECCC
Confidence 333 3 378899998765
No 231
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.92 E-value=2.9e-06 Score=71.92 Aligned_cols=210 Identities=10% Similarity=0.086 Sum_probs=134.0
Q ss_pred ccccCCCceEEEEECCCCCEE-EEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEE
Q 015438 119 PVDQTTSRAYVSQFSADGSLF-VAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVD 197 (407)
Q Consensus 119 ~~~~h~~~v~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd 197 (407)
.+.+....+..++|+|++..| ++...++.|...|.. ++.+..... .+. ...-.+++.+++.++++.-.++.+.+++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l-~g~-~D~EGIa~~~~g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPL-DFV-KDLETIEYIGDNQFVISDERDYAIYVIS 97 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEEC-SSC-SSEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEec-CCC-CChHHeEEeCCCEEEEEECCCCcEEEEE
Confidence 344556789999999986654 456778889999987 655444322 221 2367788889888777766778999999
Q ss_pred CCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCC---Ceeeeeee-------c
Q 015438 198 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA---NKLSLRIL-------A 267 (407)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~-------~ 267 (407)
+............. +.. ...........|+|+|.++.|+++.+.....+|.+.. ...+..+. .
T Consensus 98 v~~~~~i~~~~~~~------~~~-~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~ 170 (255)
T 3qqz_A 98 LTPNSEVKILKKIK------IPL-QESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQF 170 (255)
T ss_dssp ECTTCCEEEEEEEE------CCC-SSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTC
T ss_pred cCCCCeeeeeeeec------ccc-ccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhcccc
Confidence 87654311111110 000 0112334578899999998777776654444444431 11112111 1
Q ss_pred cCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccc---------cCCeEEEEecCCCCEEEEEeCCC
Q 015438 268 HTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGH---------LEGITFIDSRGDGRYLISNGKDQ 338 (407)
Q Consensus 268 ~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~---------~~~i~~~~~s~~~~~l~s~~~dg 338 (407)
+...+..++++|.++++++.+...+.|.++|.. ++++..+.-. ....-.|+|.++|+..++ ++.+
T Consensus 171 ~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-----g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n 244 (255)
T 3qqz_A 171 TLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-----GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPN 244 (255)
T ss_dssp CSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-----CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTT
T ss_pred ccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-----CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCc
Confidence 234678999998899999898889999999984 5555443311 125678999999985554 7777
Q ss_pred cEEEEE
Q 015438 339 AIKLWD 344 (407)
Q Consensus 339 ~i~iwd 344 (407)
.+..+.
T Consensus 245 ~~y~f~ 250 (255)
T 3qqz_A 245 RFYRFT 250 (255)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 665554
No 232
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.89 E-value=2.9e-07 Score=83.74 Aligned_cols=193 Identities=13% Similarity=0.058 Sum_probs=125.3
Q ss_pred ceEEEEECCCCCEEEEEeCC------CeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEe-----------
Q 015438 126 RAYVSQFSADGSLFVAGFQA------SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS----------- 188 (407)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~----------- 188 (407)
.-..+..+|+| .++++..+ +.|.++|..+.+.+...........--..+.|+|+++.++++.
T Consensus 139 ~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~ 217 (462)
T 2ece_A 139 RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGL 217 (462)
T ss_dssp EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCC
T ss_pred cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCcccccccc
Confidence 44567889999 77766555 7899999998876665443322222234688899999888874
Q ss_pred --------CCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEE--eCCCCEEEEeeC------CCeEE
Q 015438 189 --------MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKF--STDGRELVAGSS------DDCIY 252 (407)
Q Consensus 189 --------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~~~~~------dg~i~ 252 (407)
...+|.+||+.+++....+.+.. .......+.| +|+++++++++. +++|.
T Consensus 218 ~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~--------------~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~ 283 (462)
T 2ece_A 218 KLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE--------------ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIW 283 (462)
T ss_dssp CTTTHHHHSCCEEEEEETTTTEEEEEEESCT--------------TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEE
T ss_pred chhhhhhccCCEEEEEECCCCcEeeEEecCC--------------CCCccceeEeeECCCCCEEEEEEeeeccCCCceEE
Confidence 36899999999876554433211 1113445555 999998887774 56787
Q ss_pred EEEcCCCee--eeee--ec----------------cCCCeEEEEecCCCCCEEEEEeC-CCcEEEEeCcccCCCCceeee
Q 015438 253 VYDLEANKL--SLRI--LA----------------HTSDVNTVCFGDESGHLIYSGSD-DNLCKVWDRRCLNVKGKPAGV 311 (407)
Q Consensus 253 i~d~~~~~~--~~~~--~~----------------~~~~v~~i~~s~~~~~~l~s~~~-d~~i~vwd~~~~~~~~~~~~~ 311 (407)
+|....++. ...+ .. -......|.+| +++++|+++.. .+.|.+||+.... ..+.+..
T Consensus 284 v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS-~DGrfLYVSnrg~d~VavfdV~d~~-~~~lv~~ 361 (462)
T 2ece_A 284 LWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS-LDDKFLYLSLWGIGEVRQYDISNPF-KPVLTGK 361 (462)
T ss_dssp EEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC-TTSCEEEEEETTTTEEEEEECSSTT-SCEEEEE
T ss_pred EEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC-CCCCEEEEEeCCCCEEEEEEecCCC-CcEEEEE
Confidence 766544421 1111 10 02456789998 77887777764 6899999985221 2344443
Q ss_pred eccc--------------cCCeEEEEecCCCCEEEEEe
Q 015438 312 LMGH--------------LEGITFIDSRGDGRYLISNG 335 (407)
Q Consensus 312 ~~~~--------------~~~i~~~~~s~~~~~l~s~~ 335 (407)
+... ......++++|||++|+++.
T Consensus 362 I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 362 VKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 3221 01357899999999999888
No 233
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.88 E-value=1.5e-06 Score=72.73 Aligned_cols=183 Identities=15% Similarity=0.081 Sum_probs=122.5
Q ss_pred CceEEEEECCCCCEEEEEeCC--CeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCc
Q 015438 125 SRAYVSQFSADGSLFVAGFQA--SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGT 202 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~ 202 (407)
.-...+.|++ +.++.+.+.+ +.|+++|+.+++.+.........- --.+++. .++..+..-.++.+.+||..+.+
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~f--geGi~~~-~~~ly~ltw~~~~v~v~D~~tl~ 96 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYF--GAGIVAW-RDRLIQLTWRNHEGFVYDLATLT 96 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCC--EEEEEEE-TTEEEEEESSSSEEEEEETTTTE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcc--eeEEEEe-CCEEEEEEeeCCEEEEEECCcCc
Confidence 4466889987 6666666665 489999999997776554332211 1223332 23444444578999999999988
Q ss_pred eeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccC-----CCeEEEEe
Q 015438 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHT-----SDVNTVCF 277 (407)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~v~~i~~ 277 (407)
....+.... .=..++ +++..|+.+..++.|.++|..+.+.+..+.... ..++.+.|
T Consensus 97 ~~~ti~~~~-----------------~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~ 157 (243)
T 3mbr_X 97 PRARFRYPG-----------------EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEW 157 (243)
T ss_dssp EEEEEECSS-----------------CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred EEEEEeCCC-----------------CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEE
Confidence 766554321 112333 467667666678899999999999888776432 34567777
Q ss_pred cCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccc-------------cCCeEEEEecCCCCEEEEEeC
Q 015438 278 GDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGH-------------LEGITFIDSRGDGRYLISNGK 336 (407)
Q Consensus 278 s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~-------------~~~i~~~~~s~~~~~l~s~~~ 336 (407)
. ++.+++..-.+..|.+.|.+ +++.+..+.-. ..-.+.|+++|+++.|+..++
T Consensus 158 ~--~G~lyanvw~s~~I~vIDp~----tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 158 V--NGELLANVWLTSRIARIDPA----SGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp E--TTEEEEEETTTTEEEEECTT----TCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred e--CCEEEEEECCCCeEEEEECC----CCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 4 67666666567899999998 77777665411 124589999998877776664
No 234
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.88 E-value=2.6e-10 Score=103.88 Aligned_cols=178 Identities=13% Similarity=0.183 Sum_probs=94.6
Q ss_pred CCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCC
Q 015438 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259 (407)
Q Consensus 180 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~ 259 (407)
++..+++++.|+.|+.||..+++..-.... . .+.+..+..++..+++++.||.|+.||..++
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~-----------------~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG 69 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-D-----------------PVLQVPTHVEEPAFLPDPNDGSLYTLGSKNN 69 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-C-----------------CSCCCC-----CCEEECTTTCCEEEC-----
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-C-----------------CceecceEcCCCEEEEeCCCCEEEEEECCCC
Confidence 577899999999999999999987544332 1 2222334456777888889999999999998
Q ss_pred eeeeeeeccCCC-eE-EEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCC
Q 015438 260 KLSLRILAHTSD-VN-TVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKD 337 (407)
Q Consensus 260 ~~~~~~~~~~~~-v~-~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~d 337 (407)
+.+..+..+... +. +..+ ..+..+++++.|+.|+.||.+ +++.+..+..+. ...++|++..+++++.|
T Consensus 70 ~~~w~~~~~~~~~~~~sp~~--~~~~~v~~g~~dg~v~a~D~~----tG~~~w~~~~~~----~~~~~p~~~~v~~~~~d 139 (369)
T 2hz6_A 70 EGLTKLPFTIPELVQASPCR--SSDGILYMGKKQDIWYVIDLL----TGEKQQTLSSAF----ADSLSPSTSLLYLGRTE 139 (369)
T ss_dssp CCSEECSCCHHHHHTTCSCC-------CCCCEEEEEEEEECCC------------------------------EEEEEEE
T ss_pred ceeeeeeccCccccccCceE--ecCCEEEEEeCCCEEEEEECC----CCcEEEEecCCC----cccccccCCEEEEEecC
Confidence 876555332111 10 1111 134567788889999999998 777776665443 23456788899999999
Q ss_pred CcEEEEECCCCCCcccccCCCccccccceeeeCCCC----CCccCCCCCcceEEEeCC
Q 015438 338 QAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQ----ARDLKHPCDQSVATYKGH 391 (407)
Q Consensus 338 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~~~v~~~~gh 391 (407)
+.|+.||.++++....+... ......+.++ +.++....++.+..|+..
T Consensus 140 g~v~a~d~~tG~~~W~~~~~------~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~ 191 (369)
T 2hz6_A 140 YTITMYDTKTRELRWNATYF------DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSE 191 (369)
T ss_dssp EEEECCCSSSSSCCCEEEEE------EECCBCCCCCTTCCCCEEEEETSCEEEEECTT
T ss_pred CEEEEEECCCCCEEEeEecc------cccCccccCCccccceEEEECCCCEEEEEECC
Confidence 99999999998876554211 0112223332 455555556667777643
No 235
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.87 E-value=2.4e-07 Score=78.19 Aligned_cols=179 Identities=12% Similarity=0.045 Sum_probs=122.5
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEE-EeCCCeEEEEECCCCceec
Q 015438 127 AYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVY-ASMSPIVHIVDVGSGTMES 205 (407)
Q Consensus 127 v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~dg~i~vwd~~~~~~~~ 205 (407)
...+.|+ ++.++++.+.+|.|+++|+++++.+... ..... ---.+++ +++.|.. .-.++.+.+||..+.+...
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~--FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNI--FAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQRER 130 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTC--CEEEEEE--CSSCEEEEESSSCEEEEEETTTTEEEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCc--ceeEEEE--eCCEEEEEEccCCEEEEEECCcCcEEE
Confidence 4688887 4677778888899999999999776665 32211 1122444 3444444 4568899999999988766
Q ss_pred cccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccC-----CCeEEEEecCC
Q 015438 206 LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHT-----SDVNTVCFGDE 280 (407)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~v~~i~~s~~ 280 (407)
.+.... .-..++ ++++.|+.+..++.|+++|..+.+.+..+.... ..++.+.|.
T Consensus 131 ti~~~~-----------------eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-- 189 (268)
T 3nok_A 131 TTRYSG-----------------EGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-- 189 (268)
T ss_dssp EEECSS-----------------CCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--
T ss_pred EEeCCC-----------------ceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--
Confidence 554321 112233 467777777778899999999999888776422 245677885
Q ss_pred CCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccc-------------cCCeEEEEecCCCCEEEEEeC
Q 015438 281 SGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGH-------------LEGITFIDSRGDGRYLISNGK 336 (407)
Q Consensus 281 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~-------------~~~i~~~~~s~~~~~l~s~~~ 336 (407)
+|.+++....++.|.+.|.+ +++.+..+.-. ..-.+.|+++|+++.|+..++
T Consensus 190 dG~lyanvw~s~~I~vIDp~----TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 190 NGVIYANIWHSSDVLEIDPA----TGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TTEEEEEETTCSEEEEECTT----TCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCEEEEEECCCCeEEEEeCC----CCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 67666666568899999998 77777665421 124689999998766666553
No 236
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.82 E-value=3e-07 Score=81.87 Aligned_cols=217 Identities=11% Similarity=-0.006 Sum_probs=137.3
Q ss_pred CCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCceeccccccccccc
Q 015438 136 GSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDG 215 (407)
Q Consensus 136 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 215 (407)
+..+.+++.++.|..+|.. +......... ...+.++...+++. +..++.++.|..+|.. ++........
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~---~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~----- 175 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTK---KAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTN----- 175 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECS---SCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECS-----
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCC---CceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecC-----
Confidence 4567778788999999988 6544433222 22345566666665 6667778999999988 5543222211
Q ss_pred eeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEE
Q 015438 216 LDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCK 295 (407)
Q Consensus 216 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~ 295 (407)
...+.++...+++.+ .+++ +.|..+| .+++.+.........+.++... .++. |..++.++.|.
T Consensus 176 -----------~~~~~~~~~d~~g~l-~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~-~~g~-l~v~t~~~gl~ 238 (330)
T 3hxj_A 176 -----------DAITSAASIGKDGTI-YFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAIS-EDGT-IYVTSLDGHLY 238 (330)
T ss_dssp -----------SCCCSCCEECTTCCE-EEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEEC-TTSC-EEEEETTTEEE
T ss_pred -----------CCceeeeEEcCCCEE-EEEe--CEEEEEC-CCCcEEEEEccCCcceeceEEC-CCCe-EEEEcCCCeEE
Confidence 113455667777764 4455 7799999 6777666665555668888885 5665 55667778888
Q ss_pred EEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCC
Q 015438 296 VWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQAR 375 (407)
Q Consensus 296 vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 375 (407)
.+|. .+..+..+......+..+.+.+++. |..++.+|.|..+|. +++....... ....+..+...++++
T Consensus 239 ~~~~-----~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~~~~~~~----~~~~~~~~~~d~~g~ 307 (330)
T 3hxj_A 239 AINP-----DGTEKWRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAINP-DGTEKWNFET----GSWIIATPVIDENGT 307 (330)
T ss_dssp EECT-----TSCEEEEEECSSCCCSCCEECTTSC-EEEECTTCEEEEECT-TSCEEEEEEC----SSCCCSCCEECTTCC
T ss_pred EECC-----CCCEeEEeeCCCCccccceEcCCCe-EEEecCCCCEEEECC-CCcEEEEEEc----CCccccceEEcCCCE
Confidence 8875 4555555544433344556665664 667788889999995 5544333211 123344555667888
Q ss_pred ccCCCCCcceEEEeCC
Q 015438 376 DLKHPCDQSVATYKGH 391 (407)
Q Consensus 376 ~l~~~~~~~v~~~~gh 391 (407)
++....++.+....-.
T Consensus 308 l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 308 IYFGTRNGKFYALFNL 323 (330)
T ss_dssp EEEECTTSCEEEEEC-
T ss_pred EEEEcCCCeEEEEecc
Confidence 8888788877776544
No 237
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.81 E-value=2.1e-07 Score=91.51 Aligned_cols=215 Identities=12% Similarity=0.102 Sum_probs=138.0
Q ss_pred CEEEEEeC------CCeEEEEEcCCCeEEeEeeecccc-----------------------------ceEEEEEEECCCC
Q 015438 137 SLFVAGFQ------ASQIRIYDVERGWKIQKDILAKSL-----------------------------RWTVTDTSLSPDQ 181 (407)
Q Consensus 137 ~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~-----------------------------~~~v~~~~~sp~~ 181 (407)
..+++++. ++.|+.||..+|+.+......... ......++++|++
T Consensus 175 ~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~ 254 (677)
T 1kb0_A 175 GKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAEL 254 (677)
T ss_dssp TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTT
T ss_pred CEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCC
Confidence 44555543 689999999999877654432211 0011346788888
Q ss_pred CeEEEEeCCC-------------------eEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCC---
Q 015438 182 RHLVYASMSP-------------------IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG--- 239 (407)
Q Consensus 182 ~~l~~~~~dg-------------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--- 239 (407)
..+++++.++ .|..+|..+++..-...... ++...+. .......+....+|
T Consensus 255 ~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~-~d~wd~~------~~~~p~l~~~~~dG~~~ 327 (677)
T 1kb0_A 255 NTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETP-GDNWDYT------STQPMILADIKIAGKPR 327 (677)
T ss_dssp TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESST-TCCSCCC------CCSCCEEEEEEETTEEE
T ss_pred CEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCC-Ccccccc------cCCCcEEEecccCCcEe
Confidence 8888877654 59999999988754433211 0000000 01122223344477
Q ss_pred CEEEEeeCCCeEEEEEcCCCeeeeeeeccCCC-----------e------------------------EEEEecCCCCCE
Q 015438 240 RELVAGSSDDCIYVYDLEANKLSLRILAHTSD-----------V------------------------NTVCFGDESGHL 284 (407)
Q Consensus 240 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-----------v------------------------~~i~~s~~~~~~ 284 (407)
..++.++.+|.|+++|..+++.+..+...... + ..++++ ++..+
T Consensus 328 ~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~d-p~~~~ 406 (677)
T 1kb0_A 328 KVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFN-PQTGL 406 (677)
T ss_dssp EEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEE-TTTTE
T ss_pred eEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEc-CCCCE
Confidence 68999999999999999999987665421100 1 145776 55556
Q ss_pred EEEEeC-------------------------------------------CCcEEEEeCcccCCCCceeeeeccccCCeEE
Q 015438 285 IYSGSD-------------------------------------------DNLCKVWDRRCLNVKGKPAGVLMGHLEGITF 321 (407)
Q Consensus 285 l~s~~~-------------------------------------------d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~ 321 (407)
+++... .+.|..||+. +++.+-.+. +..++..
T Consensus 407 ~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~----tG~~~W~~~-~~~~~~~ 481 (677)
T 1kb0_A 407 VYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPV----AQKAAWSVE-HVSPWNG 481 (677)
T ss_dssp EEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETT----TTEEEEEEE-ESSSCCC
T ss_pred EEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCC----CCcEEeecC-CCCCCcC
Confidence 666432 2789999998 777776664 3334445
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCcccccc
Q 015438 322 IDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWD 364 (407)
Q Consensus 322 ~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 364 (407)
..+...+..++.++.||.+++||.++++.+..+.........+
T Consensus 482 g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p 524 (677)
T 1kb0_A 482 GTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAP 524 (677)
T ss_dssp CEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred cceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCC
Confidence 5566678888999999999999999999988776544333333
No 238
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.79 E-value=3e-07 Score=86.58 Aligned_cols=213 Identities=9% Similarity=0.012 Sum_probs=130.2
Q ss_pred CceEEEEE-C-CCCCEEEEEeC------------------CCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeE
Q 015438 125 SRAYVSQF-S-ADGSLFVAGFQ------------------ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHL 184 (407)
Q Consensus 125 ~~v~~~~~-s-~~~~~l~~~~~------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 184 (407)
.....+++ + |+++++++++. ++.+.++|.++.+.......... ...++++|+|+++
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~----pd~~~~spdGk~~ 209 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGN----LDNCDADYEGKWA 209 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSC----CCCEEECSSSSEE
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCCC----ccceEECCCCCEE
Confidence 45788898 5 99999988852 45799999998766555443222 3457789999999
Q ss_pred EEEeCCC---------------eEEEEECCCCc-------ee-----cccccccccc-c-eeeeecCCCCccccEEEEEE
Q 015438 185 VYASMSP---------------IVHIVDVGSGT-------ME-----SLANVTEIHD-G-LDFSAADDGGYSFGIFSLKF 235 (407)
Q Consensus 185 ~~~~~dg---------------~i~vwd~~~~~-------~~-----~~~~~~~~~~-~-~~~~~~~~~~~~~~v~~~~~ 235 (407)
++++.+. .|.+.|..... .. .++....... . ..... -.....++.+
T Consensus 210 ~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ip-----vg~~PhGv~~ 284 (595)
T 1fwx_A 210 FSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIP-----IANNPHGCNM 284 (595)
T ss_dssp EEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEE-----EESSCCCEEE
T ss_pred EEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEe-----cCCCceEEEE
Confidence 9988553 34444432210 00 0000000000 0 00000 0013457899
Q ss_pred eCCCCEEEEee-CCCeEEEEEcCCCe------------eeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCccc
Q 015438 236 STDGRELVAGS-SDDCIYVYDLEANK------------LSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCL 302 (407)
Q Consensus 236 s~~~~~l~~~~-~dg~i~i~d~~~~~------------~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~ 302 (407)
+|||+++++++ .+.+|.++|+.+.+ .+..+.. ......++|+ ++|+..++...|+.|.+||+...
T Consensus 285 sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-G~gP~h~aF~-~dG~aY~t~~ldsqV~kwdi~~a 362 (595)
T 1fwx_A 285 APDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-GLGPLHTAFD-GRGNAYTSLFLDSQVVKWNIEDA 362 (595)
T ss_dssp CTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-CSCEEEEEEC-TTSEEEEEETTTTEEEEEEHHHH
T ss_pred cCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC-CCCcceEEEC-CCCeEEEEEecCCcEEEEEhhHh
Confidence 99999776655 57889999998653 2333332 3456889998 67765666778999999998720
Q ss_pred ------CCCCceeeeeccccCCe-----EEEEecCCCCEEEEEeC---CCc----------EEEEECCCC
Q 015438 303 ------NVKGKPAGVLMGHLEGI-----TFIDSRGDGRYLISNGK---DQA----------IKLWDIRKM 348 (407)
Q Consensus 303 ------~~~~~~~~~~~~~~~~i-----~~~~~s~~~~~l~s~~~---dg~----------i~iwd~~~~ 348 (407)
+...+.+..+..|..+- .++.++|||++|+++.. |.. -.++|+...
T Consensus 363 ~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~ 432 (595)
T 1fwx_A 363 IRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGD 432 (595)
T ss_dssp HHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSS
T ss_pred hhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCC
Confidence 00145566665554421 12346899999998874 332 188999543
No 239
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.77 E-value=3.1e-06 Score=75.30 Aligned_cols=202 Identities=15% Similarity=0.116 Sum_probs=122.7
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeecc-----------------ccceEEEEEEECC-CCCeEEEE
Q 015438 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK-----------------SLRWTVTDTSLSP-DQRHLVYA 187 (407)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----------------~~~~~v~~~~~sp-~~~~l~~~ 187 (407)
...+++|+++|++++++..++.|..|+..++... ...... .....+..+++.+ +++ |+++
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~ 97 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIV 97 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEE
Confidence 3557889999997888888899999998765322 111100 0112478899998 555 5555
Q ss_pred eCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeC-CCCEEEEeeC-----------------CC
Q 015438 188 SMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSS-----------------DD 249 (407)
Q Consensus 188 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~-----------------dg 249 (407)
...+.|..+|..++....+.... .+ ........+++.+ +|++.++-.. ++
T Consensus 98 d~~~~i~~~d~~~g~~~~~~~~~---~~---------~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g 165 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQLATSV---DG---------VPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTG 165 (322)
T ss_dssp ETTTEEEEECTTCEECEEEESEE---TT---------EECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCE
T ss_pred ECCCCEEEEeCCCCEEEEecccC---CC---------CcccccceEEEecCCCEEEEECCcccccccccceehcccCCCc
Confidence 44455888887655332221100 00 0112467899999 9986665432 36
Q ss_pred eEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEE-EEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCC
Q 015438 250 CIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIY-SGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDG 328 (407)
Q Consensus 250 ~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 328 (407)
.|+.||..+++...... .......|+++ ++++.|+ +-+..+.|.+|++.... .+. ...+....+ ...++++++|
T Consensus 166 ~v~~~d~~~~~~~~~~~-~~~~p~gia~~-~dg~~lyv~d~~~~~I~~~~~~~~~-~~~-~~~~~~~~g-P~gi~~d~~G 240 (322)
T 2fp8_A 166 RLIKYDPSTKETTLLLK-ELHVPGGAEVS-ADSSFVLVAEFLSHQIVKYWLEGPK-KGT-AEVLVKIPN-PGNIKRNADG 240 (322)
T ss_dssp EEEEEETTTTEEEEEEE-EESCCCEEEEC-TTSSEEEEEEGGGTEEEEEESSSTT-TTC-EEEEEECSS-EEEEEECTTS
T ss_pred eEEEEeCCCCEEEEecc-CCccCcceEEC-CCCCEEEEEeCCCCeEEEEECCCCc-CCc-cceEEeCCC-CCCeEECCCC
Confidence 79999988776433222 22345679997 7777554 44566899999986211 011 111111223 7789999999
Q ss_pred CEEEEEeC----------CCcEEEEECC
Q 015438 329 RYLISNGK----------DQAIKLWDIR 346 (407)
Q Consensus 329 ~~l~s~~~----------dg~i~iwd~~ 346 (407)
+++++... .+.|..+|..
T Consensus 241 ~l~va~~~~~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 241 HFWVSSSEELDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp CEEEEEEEETTSSTTSCEEEEEEEECTT
T ss_pred CEEEEecCcccccccCCCccEEEEECCC
Confidence 87776654 4668888764
No 240
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.77 E-value=4e-07 Score=77.74 Aligned_cols=183 Identities=9% Similarity=0.020 Sum_probs=118.4
Q ss_pred EEEEEECCCCCeEEEEeC--CCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEe-eCC
Q 015438 172 VTDTSLSPDQRHLVYASM--SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG-SSD 248 (407)
Q Consensus 172 v~~~~~sp~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d 248 (407)
...+.|+|++.+.++.+. ++.|.++|+.+++......+... . ....+.+. ++.|+.+ -.+
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~--------------~-fgeGi~~~--g~~lyv~t~~~ 85 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS--------------Y-FGEGLTLL--NEKLYQVVWLK 85 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT--------------C-CEEEEEEE--TTEEEEEETTC
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC--------------c-ceEEEEEe--CCEEEEEEecC
Confidence 578999998755555443 57999999999987665443211 0 11234454 4455444 467
Q ss_pred CeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeecccc-----CCeEEEE
Q 015438 249 DCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHL-----EGITFID 323 (407)
Q Consensus 249 g~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~-----~~i~~~~ 323 (407)
+.+.++|..+.+.+..+......-..++. +++.++++..++.|.++|.. +.+.+..+.--. ..++.+.
T Consensus 86 ~~v~viD~~t~~v~~~i~~g~~~g~glt~---Dg~~l~vs~gs~~l~viD~~----t~~v~~~I~Vg~~~~p~~~~nele 158 (266)
T 2iwa_A 86 NIGFIYDRRTLSNIKNFTHQMKDGWGLAT---DGKILYGSDGTSILYEIDPH----TFKLIKKHNVKYNGHRVIRLNELE 158 (266)
T ss_dssp SEEEEEETTTTEEEEEEECCSSSCCEEEE---CSSSEEEECSSSEEEEECTT----TCCEEEEEECEETTEECCCEEEEE
T ss_pred CEEEEEECCCCcEEEEEECCCCCeEEEEE---CCCEEEEECCCCeEEEEECC----CCcEEEEEEECCCCcccccceeEE
Confidence 89999999999998888643122233443 44545555578899999997 656665554211 2367888
Q ss_pred ecCCCCEEEEEeCCCcEEEEECCCCCCcccccCC-Cc--------cccccceeeeCCCCCCccCC
Q 015438 324 SRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLG-FR--------SYEWDYRWMDYPPQARDLKH 379 (407)
Q Consensus 324 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~--------~~~~~v~~~~~~~~~~~l~~ 379 (407)
|. +|+.++....++.|.+.|..+++....+... .. ........++|+|++..+.+
T Consensus 159 ~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfV 222 (266)
T 2iwa_A 159 YI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFV 222 (266)
T ss_dssp EE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEE
T ss_pred EE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEE
Confidence 88 7765555556899999999999887766432 10 01123467889988754443
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.76 E-value=3.1e-07 Score=77.48 Aligned_cols=185 Identities=9% Similarity=0.027 Sum_probs=119.4
Q ss_pred EEEEEEECCCCCeEEEEeCCC--eEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEee-C
Q 015438 171 TVTDTSLSPDQRHLVYASMSP--IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-S 247 (407)
Q Consensus 171 ~v~~~~~sp~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~ 247 (407)
-...+.|+ ++.++.+.+.+| .|+++|+.+++......+.. ........++++.|+... .
T Consensus 44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-----------------~~FgeGit~~g~~ly~ltw~ 105 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-----------------RYFGEGISDWKDKIVGLTWK 105 (262)
T ss_dssp EEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-----------------TCCEEEEEEETTEEEEEESS
T ss_pred ccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-----------------ccceeEEEEeCCEEEEEEee
Confidence 45778888 676666777766 89999999998766554322 122222223355555444 5
Q ss_pred CCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccc----c-CCeEEE
Q 015438 248 DDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGH----L-EGITFI 322 (407)
Q Consensus 248 dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~----~-~~i~~~ 322 (407)
++.+.+||..+.+.+.++.... .-..+++ . +..|+.+..++.|.++|.. +.+.+..+.-. . ..++.+
T Consensus 106 ~~~v~v~D~~t~~~~~ti~~~~-eG~glt~--d-g~~L~~SdGs~~i~~iDp~----T~~v~~~I~V~~~g~~~~~lNEL 177 (262)
T 3nol_A 106 NGLGFVWNIRNLRQVRSFNYDG-EGWGLTH--N-DQYLIMSDGTPVLRFLDPE----SLTPVRTITVTAHGEELPELNEL 177 (262)
T ss_dssp SSEEEEEETTTCCEEEEEECSS-CCCCEEE--C-SSCEEECCSSSEEEEECTT----TCSEEEEEECEETTEECCCEEEE
T ss_pred CCEEEEEECccCcEEEEEECCC-CceEEec--C-CCEEEEECCCCeEEEEcCC----CCeEEEEEEeccCCcccccccee
Confidence 8899999999999998886533 2234554 3 4445555557889999997 66666655432 1 345567
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCCCCcccccCC-Cc-------cccccceeeeCCCCCCccCCCCC
Q 015438 323 DSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLG-FR-------SYEWDYRWMDYPPQARDLKHPCD 382 (407)
Q Consensus 323 ~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~-------~~~~~v~~~~~~~~~~~l~~~~~ 382 (407)
.|. +|+..+..-.++.|.+.|.++++....+... .. ........++++|+.+.|.+.+.
T Consensus 178 e~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 178 EWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 886 6766665557889999999999887766432 11 11223467888887655544443
No 242
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.76 E-value=1.6e-06 Score=85.42 Aligned_cols=215 Identities=13% Similarity=0.090 Sum_probs=134.1
Q ss_pred CCeEEEEEcCCCeEEeEeeeccc----------------------------cceEEEEEEECCCCCeEEEEeCCCe----
Q 015438 145 ASQIRIYDVERGWKIQKDILAKS----------------------------LRWTVTDTSLSPDQRHLVYASMSPI---- 192 (407)
Q Consensus 145 dg~i~iwd~~~~~~~~~~~~~~~----------------------------~~~~v~~~~~sp~~~~l~~~~~dg~---- 192 (407)
++.|..||..+|+.+........ .......++++|+...+++++.++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 68999999999987765432110 0001125678888888998887763
Q ss_pred ---------------EEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCC---EEEEeeCCCeEEEE
Q 015438 193 ---------------VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR---ELVAGSSDDCIYVY 254 (407)
Q Consensus 193 ---------------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~---~l~~~~~dg~i~i~ 254 (407)
|..||..+++..-...... ++...+ .....+.......+|+ .++.++.+|.++++
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~-~d~wd~------~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~l 334 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTP-GDAWDY------TATQHMILAELPIDGKPRKVLMQAPKNGFFYVI 334 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTCCEEEEEESST-TCCSCC------CCCSCEEEEEEEETTEEEEEEEECCTTSEEEEE
T ss_pred CCCCCCCCCceeeeeEEEEEccCCceeEeeecCC-cccccc------cCCCCcEEEeeccCCcEEEEEEEECCCCeEEEE
Confidence 9999999998754433211 000000 0111222222233565 78899999999999
Q ss_pred EcCCCeeeeeeeccC----------------------------C-----------CeEEEEecCCCCCEEEEEeC-----
Q 015438 255 DLEANKLSLRILAHT----------------------------S-----------DVNTVCFGDESGHLIYSGSD----- 290 (407)
Q Consensus 255 d~~~~~~~~~~~~~~----------------------------~-----------~v~~i~~s~~~~~~l~s~~~----- 290 (407)
|.++++.+....... . .-..++++ ++..++++...
T Consensus 335 D~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~d-p~~~~~yv~~~~~~~~ 413 (689)
T 1yiq_A 335 DRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYN-PDTGLVYIPAHIMSAY 413 (689)
T ss_dssp ETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEE-TTTTEEEEEEEECCEE
T ss_pred ECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceEC-CCCCEEEEecccccee
Confidence 999999874322110 0 01126776 44556665422
Q ss_pred ----------------------------------------CCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCE
Q 015438 291 ----------------------------------------DNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRY 330 (407)
Q Consensus 291 ----------------------------------------d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 330 (407)
+|.|+.||+. +++.+-.+..+. ++..-.+...+..
T Consensus 414 ~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~----tG~~~W~~~~~~-~~~~g~~~taggl 488 (689)
T 1yiq_A 414 YEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPV----KQQAAWEVPYVT-IFNGGTLSTAGNL 488 (689)
T ss_dssp EECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETT----TTEEEEEEEESS-SCCCCEEEETTTE
T ss_pred eeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECC----CCCeEeEccCCC-CccCccceECCCE
Confidence 3779999998 788777665443 3333355567888
Q ss_pred EEEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCC
Q 015438 331 LISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQAR 375 (407)
Q Consensus 331 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 375 (407)
++.++.||.|+.||.++++.+..+.........++ .|..+|+
T Consensus 489 vf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~---ty~~~G~ 530 (689)
T 1yiq_A 489 VFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPV---TYSVDGE 530 (689)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCE---EEEETTE
T ss_pred EEEECCCCcEEEEECCCCccceeeeCCCCcccCce---EEEECCE
Confidence 99999999999999999999887755444333333 3344553
No 243
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.76 E-value=1.2e-06 Score=87.18 Aligned_cols=196 Identities=14% Similarity=0.087 Sum_probs=114.1
Q ss_pred ceEEEEEC-CCCCEEEEEeC-CC----eEEEEEcCCC-eEEeEeeeccccceEEEEEEECCCCCeEEEEeCC-----CeE
Q 015438 126 RAYVSQFS-ADGSLFVAGFQ-AS----QIRIYDVERG-WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-----PIV 193 (407)
Q Consensus 126 ~v~~~~~s-~~~~~l~~~~~-dg----~i~iwd~~~~-~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----g~i 193 (407)
.+...+|| |||++||.+.. +| .|+++|+.++ ..+... .......+.|+||++.|+....+ ..|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~-----~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK-----VSGTNGEIVWGPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC-----EEEECSCCEECSSTTEEEEEEECTTCCEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc-----ccCceeeEEEecCCCEEEEEEECCCCCCCEE
Confidence 68889999 99999886543 22 4999999987 522111 11123468999999988887665 268
Q ss_pred EEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC---CCeEEEEEcCCCe--e--eeeee
Q 015438 194 HIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS---DDCIYVYDLEANK--L--SLRIL 266 (407)
Q Consensus 194 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~i~d~~~~~--~--~~~~~ 266 (407)
+++++.++.......... ........+.|+|||++|+..+. ...|+++|+.++. . .....
T Consensus 250 ~~~~lgt~~~~~~lv~~~-------------~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~ 316 (751)
T 2xe4_A 250 WRHVMGKLQSEDVCLYEE-------------HNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRP 316 (751)
T ss_dssp EEEETTSCGGGCEEEEEC-------------CCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSC
T ss_pred EEEECCCCchhcEEEEec-------------CCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeec
Confidence 888887654221110000 01113567899999998877653 3468999998752 2 22223
Q ss_pred ccCCCeEEEEecCCCCCEEEEEeCC--C--cEEEEeCcccCCCCceeee-eccccC--CeEEEEecCCCCEEEEEeCCCc
Q 015438 267 AHTSDVNTVCFGDESGHLIYSGSDD--N--LCKVWDRRCLNVKGKPAGV-LMGHLE--GITFIDSRGDGRYLISNGKDQA 339 (407)
Q Consensus 267 ~~~~~v~~i~~s~~~~~~l~s~~~d--~--~i~vwd~~~~~~~~~~~~~-~~~~~~--~i~~~~~s~~~~~l~s~~~dg~ 339 (407)
.......++.|+ ..+.+++.+..+ + .|..+|+. ....... +..+.. .+..+++. .+.++++...++.
T Consensus 317 ~~~~~~~s~~~~-~g~~l~~~t~~~~a~~~~L~~~d~~----~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~ 390 (751)
T 2xe4_A 317 REKGVRYDVQMH-GTSHLVILTNEGGAVNHKLLIAPRG----QPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGL 390 (751)
T ss_dssp CCTTCCEEEEEE-TTTEEEEEECTTTCTTCEEEEEETT----STTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTE
T ss_pred CCCCceEEEeee-eCCEEEEEeCCCCCCCcEEEEEcCC----CcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCE
Confidence 344556677765 444455555443 2 56666664 2112222 223333 34455554 2344556667776
Q ss_pred --EEEEEC
Q 015438 340 --IKLWDI 345 (407)
Q Consensus 340 --i~iwd~ 345 (407)
|.++|+
T Consensus 391 ~~l~~~dl 398 (751)
T 2xe4_A 391 TRIWTMMA 398 (751)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 455564
No 244
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.75 E-value=6.5e-07 Score=87.95 Aligned_cols=215 Identities=13% Similarity=0.085 Sum_probs=137.0
Q ss_pred EEEEECCCCCEEEEEeCCC-------------------eEEEEEcCCCeEEeEeeecccc------ceEEEEEEECCCC-
Q 015438 128 YVSQFSADGSLFVAGFQAS-------------------QIRIYDVERGWKIQKDILAKSL------RWTVTDTSLSPDQ- 181 (407)
Q Consensus 128 ~~~~~s~~~~~l~~~~~dg-------------------~i~iwd~~~~~~~~~~~~~~~~------~~~v~~~~~sp~~- 181 (407)
..++++|++..++.+..++ .|..+|..+|+........... .....-+....+|
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~ 325 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGK 325 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTE
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCc
Confidence 4678999999888887654 5999999999777664432211 1112223333467
Q ss_pred --CeEEEEeCCCeEEEEECCCCceeccccccccc-------ccee-------------eeecCCCCccccEEEEEEeCCC
Q 015438 182 --RHLVYASMSPIVHIVDVGSGTMESLANVTEIH-------DGLD-------------FSAADDGGYSFGIFSLKFSTDG 239 (407)
Q Consensus 182 --~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-------~~~~-------------~~~~~~~~~~~~v~~~~~s~~~ 239 (407)
..++.++.+|.|+++|..+++........... .+.. .......|.. .-..++++|++
T Consensus 326 ~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~-~w~~~a~dp~~ 404 (677)
T 1kb0_A 326 PRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAH-NWHPMSFNPQT 404 (677)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSS-CSSCCEEETTT
T ss_pred EeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCccccc-CCCCceEcCCC
Confidence 67889999999999999999876443322110 0000 0000000110 11257889988
Q ss_pred CEEEEeeC-------------------------------------------CCeEEEEEcCCCeeeeeeeccCCCeEEEE
Q 015438 240 RELVAGSS-------------------------------------------DDCIYVYDLEANKLSLRILAHTSDVNTVC 276 (407)
Q Consensus 240 ~~l~~~~~-------------------------------------------dg~i~i~d~~~~~~~~~~~~~~~~v~~i~ 276 (407)
.++++... .|.|..||+.+++.+-.+. +..++....
T Consensus 405 ~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~ 483 (677)
T 1kb0_A 405 GLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGT 483 (677)
T ss_dssp TEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCE
T ss_pred CEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcc
Confidence 88877543 2789999999999877764 334444445
Q ss_pred ecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeecccc-CCeEEEEecCCCCEEE-EEeC----------------CC
Q 015438 277 FGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHL-EGITFIDSRGDGRYLI-SNGK----------------DQ 338 (407)
Q Consensus 277 ~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~-~~i~~~~~s~~~~~l~-s~~~----------------dg 338 (407)
+. ..+.+++.++.|+.+++||.+ +++.+..+.... ....-+.|..+|+.++ +.+. .+
T Consensus 484 ~~-~~g~~v~~g~~dg~l~a~D~~----tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~ 558 (677)
T 1kb0_A 484 LT-TAGNVVFQGTADGRLVAYHAA----TGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPG 558 (677)
T ss_dssp EE-ETTTEEEEECTTSEEEEEETT----TCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCC
T ss_pred eE-eCCCEEEEECCCCcEEEEECC----CCceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCC
Confidence 54 456788889999999999998 899988876332 2223455667886444 3222 46
Q ss_pred cEEEEECCCCC
Q 015438 339 AIKLWDIRKMS 349 (407)
Q Consensus 339 ~i~iwd~~~~~ 349 (407)
.+..|.+....
T Consensus 559 ~l~~f~l~~~a 569 (677)
T 1kb0_A 559 TVYTFVVGGKA 569 (677)
T ss_dssp EEEEEEETCBC
T ss_pred eEEEEeccccc
Confidence 78888887533
No 245
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.70 E-value=7.9e-07 Score=87.53 Aligned_cols=196 Identities=13% Similarity=0.121 Sum_probs=125.0
Q ss_pred EEEECCCCCEEEEEeCCCe-------------------EEEEEcCCCeEEeEeeeccc------cceEEEEEEECCCCC-
Q 015438 129 VSQFSADGSLFVAGFQASQ-------------------IRIYDVERGWKIQKDILAKS------LRWTVTDTSLSPDQR- 182 (407)
Q Consensus 129 ~~~~s~~~~~l~~~~~dg~-------------------i~iwd~~~~~~~~~~~~~~~------~~~~v~~~~~sp~~~- 182 (407)
.++++|++.+++.+..++. |..+|.++|+.+........ ...++.......+++
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~ 318 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP 318 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence 6789998899998887763 99999999977765443211 111122222223555
Q ss_pred --eEEEEeCCCeEEEEECCCCceeccccccccc--cc-----------------------eeeeecCCCCccccEEEEEE
Q 015438 183 --HLVYASMSPIVHIVDVGSGTMESLANVTEIH--DG-----------------------LDFSAADDGGYSFGIFSLKF 235 (407)
Q Consensus 183 --~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~--~~-----------------------~~~~~~~~~~~~~~v~~~~~ 235 (407)
.++.++.+|.++++|..+++........... .. ........+++ .-..+++
T Consensus 319 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~--~w~~~a~ 396 (689)
T 1yiq_A 319 RKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAH--DWQPMSY 396 (689)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSS--CSSCCEE
T ss_pred EEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCccccc--CCCcceE
Confidence 7888999999999999999876332221100 00 00000001111 1123788
Q ss_pred eCCCCEEEEeeC---------------------------------------------CCeEEEEEcCCCeeeeeeeccCC
Q 015438 236 STDGRELVAGSS---------------------------------------------DDCIYVYDLEANKLSLRILAHTS 270 (407)
Q Consensus 236 s~~~~~l~~~~~---------------------------------------------dg~i~i~d~~~~~~~~~~~~~~~ 270 (407)
+|+..++++... +|.|+.||+.+++.+-.+..+.
T Consensus 397 dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~- 475 (689)
T 1yiq_A 397 NPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT- 475 (689)
T ss_dssp ETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-
T ss_pred CCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-
Confidence 888887776532 3789999999999887765443
Q ss_pred CeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCC-eEEEEecCCCCEEE
Q 015438 271 DVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEG-ITFIDSRGDGRYLI 332 (407)
Q Consensus 271 ~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~-i~~~~~s~~~~~l~ 332 (407)
++..-.+. ..+.+++.++.|+.|+.||.+ +++.+..+...... ..-+.|..+|+.++
T Consensus 476 ~~~~g~~~-tagglvf~gt~dg~l~a~D~~----tG~~lw~~~~~~~~~~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 476 IFNGGTLS-TAGNLVFEGSADGRVIAYAAD----TGEKLWEQPAASGVMAAPVTYSVDGEQYV 533 (689)
T ss_dssp SCCCCEEE-ETTTEEEEECTTSEEEEEETT----TCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CccCccce-ECCCEEEEECCCCcEEEEECC----CCccceeeeCCCCcccCceEEEECCEEEE
Confidence 33333444 457788999999999999998 89998877644322 23466777887443
No 246
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.66 E-value=2.1e-05 Score=69.25 Aligned_cols=224 Identities=12% Similarity=0.039 Sum_probs=130.3
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCC--CeEEEEECCCCc
Q 015438 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS--PIVHIVDVGSGT 202 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d--g~i~vwd~~~~~ 202 (407)
.....++|+++|+++++-..++.|..||.+... . ..... ...+..+++.++++++++.... ..|..++..+++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-~-~~~~~---~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-Q-IHATV---EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE-E-EEEEC---SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCce-E-EEEeC---CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe
Confidence 456789999999977777678999999987642 2 11122 2358899999999966655432 247777777776
Q ss_pred eeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCee-eeeee---------ccCCCe
Q 015438 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL-SLRIL---------AHTSDV 272 (407)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~---------~~~~~v 272 (407)
...+..... ......++..+++..+++-..++.|+++|..+++. +.... ..-...
T Consensus 107 ~~~~~~~~~---------------~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~p 171 (306)
T 2p4o_A 107 VETLLTLPD---------------AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAA 171 (306)
T ss_dssp EEEEEECTT---------------CSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSE
T ss_pred EEEEEeCCC---------------ccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcC
Confidence 533222110 00123344455554444444688999999876531 11000 111234
Q ss_pred EEEEecCCCCC-EEEEEeCCCcEEEEeCcccCCCCc--eeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCC
Q 015438 273 NTVCFGDESGH-LIYSGSDDNLCKVWDRRCLNVKGK--PAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMS 349 (407)
Q Consensus 273 ~~i~~s~~~~~-~l~s~~~d~~i~vwd~~~~~~~~~--~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 349 (407)
..| + +++. ++++-...+.|..||+... +. ....+. .......++++++|+++++....+.|.++|.. ++
T Consensus 172 ngi--s-~dg~~lyv~d~~~~~I~~~~~~~~---g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~ 243 (306)
T 2p4o_A 172 NGL--K-RFGNFLYVSNTEKMLLLRIPVDST---DKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RS 243 (306)
T ss_dssp EEE--E-EETTEEEEEETTTTEEEEEEBCTT---SCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CC
T ss_pred CCc--C-cCCCEEEEEeCCCCEEEEEEeCCC---CCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CC
Confidence 555 5 4454 5555566789999998621 11 111111 11345678999999988877778999999975 33
Q ss_pred CcccccCCCccccccceeeeCC---CCCCccC
Q 015438 350 SNASCNLGFRSYEWDYRWMDYP---PQARDLK 378 (407)
Q Consensus 350 ~~~~~~~~~~~~~~~v~~~~~~---~~~~~l~ 378 (407)
..... .........+.++|. |+++.|.
T Consensus 244 ~~~~~--~~~~~~~~p~~~a~~g~~~d~~~Ly 273 (306)
T 2p4o_A 244 TTIIA--QAEQGVIGSTAVAFGQTEGDCTAIY 273 (306)
T ss_dssp EEEEE--CGGGTCTTEEEEEECCSTTTTTEEE
T ss_pred EEEEe--ecccccCCceEEEEecccCCCCEEE
Confidence 21110 011122345677887 6754443
No 247
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.65 E-value=8.3e-06 Score=74.11 Aligned_cols=199 Identities=11% Similarity=0.002 Sum_probs=118.8
Q ss_pred CCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccc--eEEEEEEECCCCCeEEEEeCCCeEEEEECCCCceeccccccccc
Q 015438 136 GSLFVAGFQASQIRIYDVERGWKIQKDILAKSLR--WTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIH 213 (407)
Q Consensus 136 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 213 (407)
+..+++++.++.|..+|..+++.+.......... ........ .+..+++++.++.|..+|..+++..-........
T Consensus 143 ~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~ 220 (376)
T 3q7m_A 143 DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQAT 220 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEECCC--
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCC
Confidence 3467777788889999988886665433221100 00011111 2456777888999999999988765433221100
Q ss_pred cceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCc
Q 015438 214 DGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNL 293 (407)
Q Consensus 214 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~ 293 (407)
....+.... .....++ . .+..+++++.++.+..+|.++++.+-... ......+... +..++.++.++.
T Consensus 221 ~~~~~~~~~-~~~~~p~----~--~~~~v~~~~~~g~l~~~d~~tG~~~w~~~--~~~~~~~~~~---~~~l~~~~~~g~ 288 (376)
T 3q7m_A 221 GSTEIDRLS-DVDTTPV----V--VNGVVFALAYNGNLTALDLRSGQIMWKRE--LGSVNDFIVD---GNRIYLVDQNDR 288 (376)
T ss_dssp ----------CCCCCCE----E--ETTEEEEECTTSCEEEEETTTCCEEEEEC--CCCEEEEEEE---TTEEEEEETTCC
T ss_pred CCccccccc-ccCCCcE----E--ECCEEEEEecCcEEEEEECCCCcEEeecc--CCCCCCceEE---CCEEEEEcCCCe
Confidence 000000000 0000011 1 24578888889999999999998775543 2334555552 557778888999
Q ss_pred EEEEeCcccCCCCceeeeeccc-cCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccc
Q 015438 294 CKVWDRRCLNVKGKPAGVLMGH-LEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASC 354 (407)
Q Consensus 294 i~vwd~~~~~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 354 (407)
|..+|.. +++.+...... ...+..... .+..|+.++.+|.|.++|.++++.+...
T Consensus 289 l~~~d~~----tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 289 VMALTID----GGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQ 344 (376)
T ss_dssp EEEEETT----TCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EEEEECC----CCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 9999998 77766555421 122223333 3567888999999999999998776543
No 248
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.63 E-value=2e-06 Score=72.61 Aligned_cols=181 Identities=7% Similarity=-0.031 Sum_probs=118.1
Q ss_pred EEEEEECCCCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeE
Q 015438 172 VTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCI 251 (407)
Q Consensus 172 v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 251 (407)
...+.|+ ++.+..+.+.+|.|+++|+++++..... +.... ---.+.+.. +++.+..-.++.+
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~---------------FgeGit~~g-~~Ly~ltw~~~~v 118 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNI---------------FAEGLASDG-ERLYQLTWTEGLL 118 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTC---------------CEEEEEECS-SCEEEEESSSCEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCc---------------ceeEEEEeC-CEEEEEEccCCEE
Confidence 4677886 4566677788899999999999876554 32110 012244432 2344444568899
Q ss_pred EEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeecccc-----CCeEEEEecC
Q 015438 252 YVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHL-----EGITFIDSRG 326 (407)
Q Consensus 252 ~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~-----~~i~~~~~s~ 326 (407)
.+||..+.+.+.++... ..-..+++ +++.|+.+..++.|.++|.. +.+.+..+.-.. ..++.+.|.
T Consensus 119 ~V~D~~Tl~~~~ti~~~-~eGwGLt~---Dg~~L~vSdGs~~l~~iDp~----T~~v~~~I~V~~~g~~v~~lNeLe~~- 189 (268)
T 3nok_A 119 FTWSGMPPQRERTTRYS-GEGWGLCY---WNGKLVRSDGGTMLTFHEPD----GFALVGAVQVKLRGQPVELINELECA- 189 (268)
T ss_dssp EEEETTTTEEEEEEECS-SCCCCEEE---ETTEEEEECSSSEEEEECTT----TCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred EEEECCcCcEEEEEeCC-CceeEEec---CCCEEEEECCCCEEEEEcCC----CCeEEEEEEeCCCCcccccccccEEe-
Confidence 99999999999988753 23345554 35566666678899999998 666666554321 245677877
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCCcccccCC-C--------ccccccceeeeCCCCCCccCC
Q 015438 327 DGRYLISNGKDQAIKLWDIRKMSSNASCNLG-F--------RSYEWDYRWMDYPPQARDLKH 379 (407)
Q Consensus 327 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~--------~~~~~~v~~~~~~~~~~~l~~ 379 (407)
+|+.++..-.++.|.+.|.++++.+..+... . .........++++|++..|.+
T Consensus 190 dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfV 251 (268)
T 3nok_A 190 NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFM 251 (268)
T ss_dssp TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEE
T ss_pred CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEE
Confidence 7766655557889999999999887766432 1 111223467888886544433
No 249
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.63 E-value=1.1e-05 Score=71.65 Aligned_cols=197 Identities=14% Similarity=0.045 Sum_probs=120.2
Q ss_pred CceEEEEECC-CCCEEEEEeCCCeEEEEEcCCCeEEeEeee-ccc-cceEEEEEEECC-CCCeEEEEeC-----------
Q 015438 125 SRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDIL-AKS-LRWTVTDTSLSP-DQRHLVYASM----------- 189 (407)
Q Consensus 125 ~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~-~~~~v~~~~~sp-~~~~l~~~~~----------- 189 (407)
..+.++++.+ +|+++ ++...+.|..+|..++. +..... ... .......+++.+ +|++.++...
T Consensus 80 ~~p~gi~~~~~~g~l~-v~d~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~ 157 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLY-IVDCYYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQI 157 (322)
T ss_dssp CCEEEEEEETTTTEEE-EEETTTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHH
T ss_pred CCCceEEEcCCCCcEE-EEECCCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCCCEEEEECCccccccccccee
Confidence 3578999998 66544 45445568888877542 211111 111 112367899999 8876666432
Q ss_pred ------CCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEe-eCCCeEEEEEcCCCe--
Q 015438 190 ------SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG-SSDDCIYVYDLEANK-- 260 (407)
Q Consensus 190 ------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~i~d~~~~~-- 260 (407)
++.|..||..+++....... ......++++|+++.|+++ +.++.|++|++....
T Consensus 158 ~~~~~~~g~v~~~d~~~~~~~~~~~~-----------------~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~ 220 (322)
T 2fp8_A 158 MDTSDKTGRLIKYDPSTKETTLLLKE-----------------LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKG 220 (322)
T ss_dssp HHHTCCCEEEEEEETTTTEEEEEEEE-----------------ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTT
T ss_pred hcccCCCceEEEEeCCCCEEEEeccC-----------------CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCC
Confidence 36788888776653222110 0124568999999866655 556899999987531
Q ss_pred eeeeeeccCCCeEEEEecCCCCCEEEEEeC----------CCcEEEEeCcccCCCCceeeeeccc----cCCeEEEEecC
Q 015438 261 LSLRILAHTSDVNTVCFGDESGHLIYSGSD----------DNLCKVWDRRCLNVKGKPAGVLMGH----LEGITFIDSRG 326 (407)
Q Consensus 261 ~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~----------d~~i~vwd~~~~~~~~~~~~~~~~~----~~~i~~~~~s~ 326 (407)
....+....+ ...+++. ++|+++++... .+.|..+|. .++.+..+... ...++.+++ .
T Consensus 221 ~~~~~~~~~g-P~gi~~d-~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-----~G~~~~~~~~~~g~~~~~~~~~~~-~ 292 (322)
T 2fp8_A 221 TAEVLVKIPN-PGNIKRN-ADGHFWVSSSEELDGNMHGRVDPKGIKFDE-----FGNILEVIPLPPPFAGEHFEQIQE-H 292 (322)
T ss_dssp CEEEEEECSS-EEEEEEC-TTSCEEEEEEEETTSSTTSCEEEEEEEECT-----TSCEEEEEECCTTTTTSCCCEEEE-E
T ss_pred ccceEEeCCC-CCCeEEC-CCCCEEEEecCcccccccCCCccEEEEECC-----CCCEEEEEECCCCCccccceEEEE-e
Confidence 1112211223 7788996 78887776654 466888876 45666555433 234677776 3
Q ss_pred CCCEEEEEeCCCcEEEEECCCC
Q 015438 327 DGRYLISNGKDQAIKLWDIRKM 348 (407)
Q Consensus 327 ~~~~l~s~~~dg~i~iwd~~~~ 348 (407)
+++++++....+.|.++++...
T Consensus 293 ~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 293 DGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp TTEEEEECSSCSEEEEEEC---
T ss_pred CCEEEEeecCCCceEEEecccc
Confidence 6666666667889999998653
No 250
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.60 E-value=1.5e-05 Score=68.60 Aligned_cols=191 Identities=9% Similarity=0.035 Sum_probs=114.5
Q ss_pred CCEEEEEeCCCeEEEEEcCCCeEEe--EeeeccccceEEEEEEECCCCCeEEEE-eCCCeEEEEECCCCceecccccccc
Q 015438 136 GSLFVAGFQASQIRIYDVERGWKIQ--KDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVDVGSGTMESLANVTEI 212 (407)
Q Consensus 136 ~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~ 212 (407)
|++|+.+.. +.|+.++++...... ...........+..++|++++..|..+ ..++.|.++++...........
T Consensus 1 ~~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~--- 76 (267)
T 1npe_A 1 GTHLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQ--- 76 (267)
T ss_dssp CEEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECT---
T ss_pred CcEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEEC---
Confidence 345555543 578989987642110 000011112357889999976666554 4578999999876543221110
Q ss_pred ccceeeeecCCCCccccEEEEEEeCCCCEEEEe-eCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeC-
Q 015438 213 HDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG-SSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSD- 290 (407)
Q Consensus 213 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~- 290 (407)
.......+++++++..|+.+ ...+.|.++++..................++++|..+.++++...
T Consensus 77 -------------~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~ 143 (267)
T 1npe_A 77 -------------DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNR 143 (267)
T ss_dssp -------------TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCS
T ss_pred -------------CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCC
Confidence 01256789999976655544 456789999987543222222222467899998445555555443
Q ss_pred -CCcEEEEeCcccCCCCceeeeec-cccCCeEEEEecCCCCEEEEE-eCCCcEEEEECCCC
Q 015438 291 -DNLCKVWDRRCLNVKGKPAGVLM-GHLEGITFIDSRGDGRYLISN-GKDQAIKLWDIRKM 348 (407)
Q Consensus 291 -d~~i~vwd~~~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~s~-~~dg~i~iwd~~~~ 348 (407)
.+.|..+++. +.....+. ........+++++++..|..+ ...+.|.++|+...
T Consensus 144 ~~~~I~~~~~d-----g~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~ 199 (267)
T 1npe_A 144 DNPKIETSHMD-----GTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP 199 (267)
T ss_dssp SSCEEEEEETT-----SCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE
T ss_pred CCcEEEEEecC-----CCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC
Confidence 4688888874 22222221 223457899999987666544 45788999998754
No 251
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.60 E-value=4.2e-05 Score=69.41 Aligned_cols=225 Identities=9% Similarity=-0.005 Sum_probs=133.5
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCceecccccccccc
Q 015438 135 DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHD 214 (407)
Q Consensus 135 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 214 (407)
++..+++++.++.|..+|..+++............. .... .+..+++++.++.|..+|..+++..-.........
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~---~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~ 176 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALS---RPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSL 176 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCS---CCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEc---CCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCce
Confidence 456777888899999999999876655433221111 1111 24577888889999999999887654332211000
Q ss_pred ceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCC----------e-EEEEecCCCCC
Q 015438 215 GLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSD----------V-NTVCFGDESGH 283 (407)
Q Consensus 215 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----------v-~~i~~s~~~~~ 283 (407)
. .... ...... +..+++++.++.|..+|..+++.+-........ + ..... .+.
T Consensus 177 ~-------~~~~----~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~---~~~ 240 (376)
T 3q7m_A 177 S-------LRGE----SAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV---VNG 240 (376)
T ss_dssp ---------CCC----CCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE---ETT
T ss_pred e-------ecCC----CCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE---ECC
Confidence 0 0000 111122 346888888999999999999877655422110 1 11112 245
Q ss_pred EEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccc
Q 015438 284 LIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEW 363 (407)
Q Consensus 284 ~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 363 (407)
.++.++.++.+..+|.+ +++.+.... ......+.. ++..|+.++.++.|..+|..+++...........
T Consensus 241 ~v~~~~~~g~l~~~d~~----tG~~~w~~~--~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~--- 309 (376)
T 3q7m_A 241 VVFALAYNGNLTALDLR----SGQIMWKRE--LGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHR--- 309 (376)
T ss_dssp EEEEECTTSCEEEEETT----TCCEEEEEC--CCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTS---
T ss_pred EEEEEecCcEEEEEECC----CCcEEeecc--CCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCC---
Confidence 67788889999999997 777665543 223444444 4667888888999999999998765543210000
Q ss_pred cceeeeCCCCCCccCCCCCcceEEEeCCc
Q 015438 364 DYRWMDYPPQARDLKHPCDQSVATYKGHS 392 (407)
Q Consensus 364 ~v~~~~~~~~~~~l~~~~~~~v~~~~gh~ 392 (407)
.+..... .+++++....++.+..|+..+
T Consensus 310 ~~~~~~~-~~~~l~v~~~~g~l~~~d~~t 337 (376)
T 3q7m_A 310 LLTSPVL-YNGNLVVGDSEGYLHWINVED 337 (376)
T ss_dssp CCCCCEE-ETTEEEEECTTSEEEEEETTT
T ss_pred cccCCEE-ECCEEEEEeCCCeEEEEECCC
Confidence 0000011 134555555566677776443
No 252
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.59 E-value=5.6e-07 Score=80.15 Aligned_cols=218 Identities=14% Similarity=0.090 Sum_probs=130.2
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCceecccc
Q 015438 129 VSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLAN 208 (407)
Q Consensus 129 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 208 (407)
+.....++. +.+++.++.|..|| .+++..... ......+.++...+++.++ +++.+ |..+|. +++......
T Consensus 24 ~~~~d~~g~-l~v~t~~~~l~~~d-~~g~~~~~~---~~~~~~~~~~~~~~~g~l~-v~t~~--l~~~d~-~g~~~~~~~ 94 (330)
T 3hxj_A 24 SPILAKNGT-IYLGSSNKNLYAIN-TDGSVKWFF---KSGEIIECRPSIGKDGTIY-FGSDK--VYAINP-DGTEKWRFD 94 (330)
T ss_dssp CCEECTTSC-EECSSTTTTTEEEC-TTSCEEESS---CGGGEEEECCEETTTTEEC-CSSCE--EEEECC-CGGGGGGSC
T ss_pred CceEccCCe-EEEEcCCCEEEEEC-CCCcEEEEE---ecCCCcccceEEecCCcEE-EecCc--EEEECC-CCcEEEEEE
Confidence 445555665 55566788899999 777554332 2233446777777777644 44444 888875 443322221
Q ss_pred ccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEE
Q 015438 209 VTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSG 288 (407)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~ 288 (407)
.... ......+. +..|.+++.++.|..+|.. ++...........+.++... .++. ++.+
T Consensus 95 ~~~~----------------~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~-~~g~-l~vg 153 (330)
T 3hxj_A 95 TKKA----------------IVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVS-EDGT-IYVG 153 (330)
T ss_dssp C---------------------CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEEC-TTSC-EEEE
T ss_pred CCCC----------------cccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEc-CCCE-EEEE
Confidence 1100 11122222 4467788888999999998 77666655555556666664 5665 5567
Q ss_pred eCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccceee
Q 015438 289 SDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWM 368 (407)
Q Consensus 289 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 368 (407)
+.++.|..+|.. ++.+..+......+.++...+++..++.. +.|..|| .+++....... ....+..+
T Consensus 154 t~~~~l~~~d~~-----g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~----~~~~~~~~ 220 (330)
T 3hxj_A 154 SNDNYLYAINPD-----GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYA----GYWTVTRP 220 (330)
T ss_dssp CTTSEEEEECTT-----SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECC----SSCCCSCC
T ss_pred cCCCEEEEECCC-----CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEcc----CCcceece
Confidence 788999999974 44444444444556777777788755544 7899999 66554433221 11234555
Q ss_pred eCCCCCCccCCCCCcceEEEe
Q 015438 369 DYPPQARDLKHPCDQSVATYK 389 (407)
Q Consensus 369 ~~~~~~~~l~~~~~~~v~~~~ 389 (407)
...+++.++....++.+..|+
T Consensus 221 ~~~~~g~l~v~t~~~gl~~~~ 241 (330)
T 3hxj_A 221 AISEDGTIYVTSLDGHLYAIN 241 (330)
T ss_dssp EECTTSCEEEEETTTEEEEEC
T ss_pred EECCCCeEEEEcCCCeEEEEC
Confidence 666777777666566666664
No 253
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.54 E-value=5e-06 Score=81.59 Aligned_cols=117 Identities=13% Similarity=0.115 Sum_probs=71.8
Q ss_pred EEEECC-CCCEEEEEeCCC-----------eEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeC-CCeEEE
Q 015438 129 VSQFSA-DGSLFVAGFQAS-----------QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM-SPIVHI 195 (407)
Q Consensus 129 ~~~~s~-~~~~l~~~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-dg~i~v 195 (407)
.+++.+ +++.++.|+.+. .+.+||+.++...........+.....++++.++++++++|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 556777 888888887543 5889999876322211111112122334677789999999884 458999
Q ss_pred EECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEee-CC-----CeEEEEEcCCCe
Q 015438 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-SD-----DCIYVYDLEANK 260 (407)
Q Consensus 196 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d-----g~i~i~d~~~~~ 260 (407)
||..+.+......+... ..-.+++..+++++++.|+ .+ ..+.+||..+.+
T Consensus 270 yd~~t~~W~~~~~~~~~---------------R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVA---------------RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEGGGTEEEECCCCSSC---------------CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred ecCcCCceeECCCCCcc---------------ccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 99987765443221110 0112345556888888877 33 468888887654
No 254
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.52 E-value=9.9e-06 Score=67.72 Aligned_cols=182 Identities=13% Similarity=0.021 Sum_probs=115.3
Q ss_pred eEEEEEEECCCCCeEEEEeCC--CeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC
Q 015438 170 WTVTDTSLSPDQRHLVYASMS--PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS 247 (407)
Q Consensus 170 ~~v~~~~~sp~~~~l~~~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 247 (407)
.-...+.|++ +.++.+.+.. ..|+++|+.+++......+.... ---.+.+. .+++....-.
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~---------------fgeGi~~~-~~~ly~ltw~ 83 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY---------------FGAGIVAW-RDRLIQLTWR 83 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC---------------CEEEEEEE-TTEEEEEESS
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc---------------ceeEEEEe-CCEEEEEEee
Confidence 3467888876 5555666664 48999999999876655433211 01123333 2333444456
Q ss_pred CCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeecccc-----CCeEEE
Q 015438 248 DDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHL-----EGITFI 322 (407)
Q Consensus 248 dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~-----~~i~~~ 322 (407)
++.+.+||..+.+.+.++.... .-..++. ..+ .|+.+..++.|.++|.. +.+.+..+.-.. ..++.+
T Consensus 84 ~~~v~v~D~~tl~~~~ti~~~~-~Gwglt~--dg~-~L~vSdgs~~l~~iDp~----t~~~~~~I~V~~~g~~~~~lNeL 155 (243)
T 3mbr_X 84 NHEGFVYDLATLTPRARFRYPG-EGWALTS--DDS-HLYMSDGTAVIRKLDPD----TLQQVGSIKVTAGGRPLDNLNEL 155 (243)
T ss_dssp SSEEEEEETTTTEEEEEEECSS-CCCEEEE--CSS-CEEEECSSSEEEEECTT----TCCEEEEEECEETTEECCCEEEE
T ss_pred CCEEEEEECCcCcEEEEEeCCC-CceEEee--CCC-EEEEECCCCeEEEEeCC----CCeEEEEEEEccCCcccccceee
Confidence 8899999999999999887543 3345654 344 44455568899999998 666666554321 245667
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCCCCcccccCC-C--------ccccccceeeeCCCCCCcc
Q 015438 323 DSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLG-F--------RSYEWDYRWMDYPPQARDL 377 (407)
Q Consensus 323 ~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~--------~~~~~~v~~~~~~~~~~~l 377 (407)
.|. +|+.++..-.+..|.+.|.++++.+..+... . .........++++|++..|
T Consensus 156 e~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~l 218 (243)
T 3mbr_X 156 EWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRL 218 (243)
T ss_dssp EEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEE
T ss_pred EEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEE
Confidence 776 6766665557889999999999887765422 1 0112234667777765433
No 255
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.52 E-value=9.1e-05 Score=67.51 Aligned_cols=207 Identities=7% Similarity=-0.036 Sum_probs=125.9
Q ss_pred CCceEEEEECCCCCEEE-EEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEE-EEeCCCeEEEEECCCC
Q 015438 124 TSRAYVSQFSADGSLFV-AGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLV-YASMSPIVHIVDVGSG 201 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~-~~~~dg~i~vwd~~~~ 201 (407)
...+..++|++.+..|+ +-...+.|..++++.+... ... ... ......+++.+.+..|. +-...+.|.+.++...
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~-~~~-~~~-~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~ 191 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE-EVV-STG-LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA 191 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEE-EEE-CSS-CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSC
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcE-EEE-eCC-CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC
Confidence 34578999998665555 4445788999998865322 211 111 11245678877555444 4455678888887644
Q ss_pred ceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEee-CC-CeEEEEEcCCCeeeeeeeccCCCeEEEEecC
Q 015438 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-SD-DCIYVYDLEANKLSLRILAHTSDVNTVCFGD 279 (407)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d-g~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~ 279 (407)
....+.. ........++++|.+..|+... .. +.|+.+++............-.....|+++|
T Consensus 192 ~~~~l~~----------------~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~ 255 (386)
T 3v65_B 192 HRKVLLW----------------QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDY 255 (386)
T ss_dssp SCEEEEC----------------SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEG
T ss_pred ceEEeec----------------CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeC
Confidence 3222111 0112467899998776665554 33 6899999875433332223334578899985
Q ss_pred CCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccc
Q 015438 280 ESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASC 354 (407)
Q Consensus 280 ~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 354 (407)
..+.++++-+..+.|..+|+. .......+.........+++ ..+..+++-...+.|..+|..+++....+
T Consensus 256 ~~~~lY~aD~~~~~I~~~d~d----G~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i 325 (386)
T 3v65_B 256 AGRRMYWVDAKHHVIERANLD----GSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEII 325 (386)
T ss_dssp GGTEEEEEETTTTEEEEECTT----SCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCCEEEEEECCCCEEEEEeCC----CCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEE
Confidence 566666666677899999985 22222223223345677888 34556666667888999997676655544
No 256
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.51 E-value=0.00013 Score=73.31 Aligned_cols=246 Identities=7% Similarity=0.033 Sum_probs=149.8
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeec----cccceEEEEEEECCCCCeEEEEeCCCeEEEEECC
Q 015438 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILA----KSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVG 199 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~ 199 (407)
...|.++...++|.+.+. +.++-|.+||..++......... .-....|.++...+++.+.+ |+.+| |.+|+..
T Consensus 214 ~~~i~~i~~d~~g~lwig-t~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~ 290 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVA-TEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFND-LNIYHEG 290 (795)
T ss_dssp CCCEEEEEEEETTEEEEE-EBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESSC-EEEEETT
T ss_pred CCeeEEEEEcCCCCEEEE-ECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCCh-hheEcCC
Confidence 467888988888876554 44444899998776332211110 11234699999988887554 44554 8889987
Q ss_pred CCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeec-------cCCCe
Q 015438 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA-------HTSDV 272 (407)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------~~~~v 272 (407)
++............ ..-....|.++...++|. |.+|+.++-|..|+..+.... .+.. ....|
T Consensus 291 ~~~~~~~~~~~~~~---------~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~l~~~~V 359 (795)
T 4a2l_A 291 TDSFASYSSNPVEN---------GSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFK-NIRNIPYKNSLSDNVV 359 (795)
T ss_dssp TTEEEEECCCTTST---------TSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSE-EECCCTTSSSCSCSSE
T ss_pred CCeEEEEecCCCCC---------CCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccce-EEcCCCCCCCCCCCee
Confidence 76543322111000 001223699999999887 556777777999997655432 2211 23468
Q ss_pred EEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeecc--------ccCCeEEEEecCCCCEEEEEeCCCcEEEEE
Q 015438 273 NTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMG--------HLEGITFIDSRGDGRYLISNGKDQAIKLWD 344 (407)
Q Consensus 273 ~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~--------~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd 344 (407)
.++... .++++ ..|+.++-|..||.. .+........ ....|.++...++|+.|..|+.++.|.+||
T Consensus 360 ~~i~~d-~~g~l-WiGt~~~Gl~~~~~~----~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d 433 (795)
T 4a2l_A 360 SCIVED-KDKNL-WIGTNDGGLNLYNPI----TQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILH 433 (795)
T ss_dssp EEEEEC-TTSCE-EEEESSSCEEEECTT----TCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEE
T ss_pred EEEEEC-CCCCE-EEEECCCCeEEEcCC----CCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEe
Confidence 888884 66764 467777789999986 3322211111 135689999988888566677778899999
Q ss_pred CCCCCCcccccCCCccccccceeeeCCCCCCccCCCCCcceEEEeC
Q 015438 345 IRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKG 390 (407)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~g 390 (407)
.++++...............+.++...++++++.... +-+..|+.
T Consensus 434 ~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~ 478 (795)
T 4a2l_A 434 RNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNP 478 (795)
T ss_dssp TTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEET
T ss_pred CCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeC
Confidence 8875432211100111234567777778888776554 34556654
No 257
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.50 E-value=0.00013 Score=65.54 Aligned_cols=206 Identities=7% Similarity=-0.039 Sum_probs=125.3
Q ss_pred CceEEEEECCCCCEEEEE-eCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeE-EEEeCCCeEEEEECCCCc
Q 015438 125 SRAYVSQFSADGSLFVAG-FQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHL-VYASMSPIVHIVDVGSGT 202 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~~~~~dg~i~vwd~~~~~ 202 (407)
..+.+++|++.+..|+.+ ...+.|..++++.+... ... ..+ ......+++.+.+..| ++-...+.|.+.++....
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~-~~~-~~~-~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 149 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE-EVV-STG-LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH 149 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEE-CSS-CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCce-EEE-eCC-CCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc
Confidence 457899999866655544 45788999998765322 111 111 1235678888755544 444566789999987543
Q ss_pred eeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEee-CC-CeEEEEEcCCCeeeeeeeccCCCeEEEEecCC
Q 015438 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-SD-DCIYVYDLEANKLSLRILAHTSDVNTVCFGDE 280 (407)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d-g~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~ 280 (407)
...+.. . .-.....++++|.+..|+... .. +.|..+++........+...-.....|+++|.
T Consensus 150 ~~~l~~-~---------------~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~ 213 (349)
T 3v64_C 150 RKVLLW-Q---------------SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYA 213 (349)
T ss_dssp CEEEEC-T---------------TCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETT
T ss_pred eEEEEe-C---------------CCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCC
Confidence 222111 0 111467899999666555443 44 78999998754332222223345688999855
Q ss_pred CCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccc
Q 015438 281 SGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASC 354 (407)
Q Consensus 281 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 354 (407)
.+.+.++-...+.|..+|+. .......+.........+++. .+..+++-...+.|..+|..+++....+
T Consensus 214 ~~~lY~aD~~~~~I~~~~~d----G~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 214 GRRMYWVDAKHHVIERANLD----GSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp TTEEEEEETTTTEEEEEETT----SCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCEEEEEECCCCEEEEEeCC----CCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEe
Confidence 66666666677899999985 222222222233456778873 4556666667888999987666655443
No 258
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.45 E-value=0.00015 Score=72.81 Aligned_cols=242 Identities=8% Similarity=-0.014 Sum_probs=147.7
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeec----cccceEEEEEEECCCCCeEEEEeCCCeEEEEECC
Q 015438 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILA----KSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVG 199 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~ 199 (407)
...|.++...++|.+. .|+.++-|..|+..++.. ...... .-....|.++...+++. |..|+.++-|..|+..
T Consensus 309 ~~~i~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~~-~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~ 385 (795)
T 4a2l_A 309 QRSVRSIFMDSQGGMW-LGTYFGGLNYYHPIRNRF-KNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPI 385 (795)
T ss_dssp SSCEEEEEECTTSCEE-EEESSSCEEEECGGGGSS-EEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTT
T ss_pred CCcEEEEEEeCCcCEE-EEECCCCeEEeCCCcccc-eEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCC
Confidence 4679999999998855 466667789998765421 111110 01233589999888876 4456777678999987
Q ss_pred CCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeee----ccCCCeEEE
Q 015438 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL----AHTSDVNTV 275 (407)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----~~~~~v~~i 275 (407)
++............. ..-....|.++...++++.|.+|+.++-|..||..+++...... .....|.++
T Consensus 386 ~~~~~~~~~~~~~~~--------~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i 457 (795)
T 4a2l_A 386 TQRFTSYTLQEDESA--------RGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAI 457 (795)
T ss_dssp TCCEEEECCC--------------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEE
T ss_pred CCcEEEEecCCCCcc--------cCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEE
Confidence 765433221100000 00012368999999888857778887779999998776433211 134578888
Q ss_pred EecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeecc-------ccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 015438 276 CFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMG-------HLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKM 348 (407)
Q Consensus 276 ~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~-------~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 348 (407)
... .++++.+. +. +-|.+||.. .++. ..+.. ....|.++...++|+..+... +.|..||..+.
T Consensus 458 ~~d-~~g~lwig-t~-~Gl~~~~~~----~~~~-~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~ 527 (795)
T 4a2l_A 458 LPD-GEGNLWLG-TL-SALVRFNPE----QRSF-TTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGL 527 (795)
T ss_dssp EEC-SSSCEEEE-ES-SCEEEEETT----TTEE-EECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETT
T ss_pred EEC-CCCCEEEE-ec-CceeEEeCC----CCeE-EEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCC
Confidence 885 66776544 44 458889875 3332 22211 235689999999988666444 56888998765
Q ss_pred CCccccc---CCCccccccceeeeCCCCCCccCCCCCcceEEEe
Q 015438 349 SSNASCN---LGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYK 389 (407)
Q Consensus 349 ~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~ 389 (407)
+. .+. .........+.++...++++++....+ -+..|+
T Consensus 528 ~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~d 568 (795)
T 4a2l_A 528 DI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE-GFYCFN 568 (795)
T ss_dssp EE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS-CEEEEE
T ss_pred eE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC-CceeEC
Confidence 43 111 111122345677788888888765544 455554
No 259
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.40 E-value=3.4e-05 Score=75.71 Aligned_cols=200 Identities=16% Similarity=0.120 Sum_probs=122.9
Q ss_pred CCeEEEEEcCCCeEEeEeeecccc----------------------------ceEEEEEEECCCCCeEEEEeCCC-----
Q 015438 145 ASQIRIYDVERGWKIQKDILAKSL----------------------------RWTVTDTSLSPDQRHLVYASMSP----- 191 (407)
Q Consensus 145 dg~i~iwd~~~~~~~~~~~~~~~~----------------------------~~~v~~~~~sp~~~~l~~~~~dg----- 191 (407)
++.|..+|..+|+.+......... ......+++.|+...++.++.++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 589999999999877665431110 00112357788888888887665
Q ss_pred --------------eEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCC---EEEEeeCCCeEEEE
Q 015438 192 --------------IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR---ELVAGSSDDCIYVY 254 (407)
Q Consensus 192 --------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~---~l~~~~~dg~i~i~ 254 (407)
.|..+|..+++..-...... ++...+ ....+.....+..+|+ .++.++.+|.++++
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~-~~~wd~------~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~l 329 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTP-GDSWDF------TATQQITLAELNIDGKPRKVLMQAPKNGFFYVL 329 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESST-TCCSCC------CCCSCEEEEEEEETTEEEEEEEECCTTSEEEEE
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCC-Cccccc------cCCCCcEEEEeccCCcEEEEEEEECCCCEEEEE
Confidence 38999999998754443211 000000 0011222223334665 68899999999999
Q ss_pred EcCCCeeeeeeeccC-----------C-Ce------------------------EEEEecCCCCCEEEEE----------
Q 015438 255 DLEANKLSLRILAHT-----------S-DV------------------------NTVCFGDESGHLIYSG---------- 288 (407)
Q Consensus 255 d~~~~~~~~~~~~~~-----------~-~v------------------------~~i~~s~~~~~~l~s~---------- 288 (407)
|..+++.+....... + ++ ..++++|. ..+++..
T Consensus 330 D~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~-~g~~yv~~~~~~~~~~~ 408 (668)
T 1kv9_A 330 DRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPG-TGLVYIPYQEVPGVYRN 408 (668)
T ss_dssp ETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETT-TTEEEEEEEECCEEECC
T ss_pred ECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCC-CCEEEEeccccceEeee
Confidence 999999874332111 0 00 11566533 3344331
Q ss_pred --------------------------eCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEE
Q 015438 289 --------------------------SDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKL 342 (407)
Q Consensus 289 --------------------------~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~i 342 (407)
..+|.|..||+. +++.+-....+ .++....+...+.+++.++.|+.|+.
T Consensus 409 ~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~----tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a 483 (668)
T 1kv9_A 409 EGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPV----KQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHA 483 (668)
T ss_dssp CGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETT----TTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEE
T ss_pred eccccccccccccCccccccCCCCCCCccceEEEEeCC----CCcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchh
Confidence 124789999998 77776655432 23333334446788999999999999
Q ss_pred EECCCCCCcccccCC
Q 015438 343 WDIRKMSSNASCNLG 357 (407)
Q Consensus 343 wd~~~~~~~~~~~~~ 357 (407)
||.++++.+..+...
T Consensus 484 ~d~~tG~~l~~~~~~ 498 (668)
T 1kv9_A 484 YSADKGEALWQFEAQ 498 (668)
T ss_dssp EETTTCCEEEEEECS
T ss_pred hhhhcChhheEecCC
Confidence 999999988776543
No 260
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.39 E-value=0.00095 Score=58.89 Aligned_cols=206 Identities=10% Similarity=-0.048 Sum_probs=123.3
Q ss_pred CCceEEEEECCCCCEEEEE-eCCCeEEEEEcCCC---eEEeEeeeccccceEEEEEEECCCCCeE-EEEeCCCeEEEEEC
Q 015438 124 TSRAYVSQFSADGSLFVAG-FQASQIRIYDVERG---WKIQKDILAKSLRWTVTDTSLSPDQRHL-VYASMSPIVHIVDV 198 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~~~~~dg~i~vwd~ 198 (407)
-..+.+++|++.+..|+.+ ...+.|..+++... ....... .. .......+++.+.+..| ++-...+.|.++++
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~-~~-~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~ 106 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SR-DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 106 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE-CS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEE-eC-CCCCcCEEEEeecCCeEEEEECCCCEEEEEeC
Confidence 3457899999876555544 45688999998751 1111111 11 11235678888655444 44456789999998
Q ss_pred CCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC-C-CeEEEEEcCCCeeeeee-eccCCCeEEE
Q 015438 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-D-DCIYVYDLEANKLSLRI-LAHTSDVNTV 275 (407)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d-g~i~i~d~~~~~~~~~~-~~~~~~v~~i 275 (407)
.......+... .......++++|.+..|+.+.. . +.|..+++.... ...+ ...-.....|
T Consensus 107 ~g~~~~~~~~~----------------~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~~~~~~~P~gl 169 (316)
T 1ijq_A 107 KGVKRKTLFRE----------------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGI 169 (316)
T ss_dssp TSSSEEEEEEC----------------TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECSSCSCEEEE
T ss_pred CCCceEEEEEC----------------CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEEECCCCCceEE
Confidence 75433222110 0114678999997666655543 2 689999886433 2333 2233457899
Q ss_pred EecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeec---cccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcc
Q 015438 276 CFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLM---GHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNA 352 (407)
Q Consensus 276 ~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~ 352 (407)
++++..+.++++-+..+.|..+|+. +.....+. ........+++. .+..+++-...+.|..+|..+++...
T Consensus 170 a~d~~~~~lY~~D~~~~~I~~~d~d-----g~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~ 243 (316)
T 1ijq_A 170 TLDLLSGRLYWVDSKLHSISSIDVN-----GGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVN 243 (316)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETT-----SCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCE
T ss_pred EEeccCCEEEEEECCCCeEEEEecC-----CCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceE
Confidence 9985555555666667899999985 22222221 122345678875 45666666678899999987776554
Q ss_pred cc
Q 015438 353 SC 354 (407)
Q Consensus 353 ~~ 354 (407)
.+
T Consensus 244 ~i 245 (316)
T 1ijq_A 244 LL 245 (316)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 261
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.37 E-value=0.00012 Score=62.01 Aligned_cols=206 Identities=9% Similarity=0.096 Sum_probs=124.9
Q ss_pred ccceEEEEEEECCCCCeEE-EEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEe
Q 015438 167 SLRWTVTDTSLSPDQRHLV-YASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG 245 (407)
Q Consensus 167 ~~~~~v~~~~~sp~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 245 (407)
+....+..++|+|++..|+ +...++.|...|.. ++......+... ...-.|++.+++.++++.
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~---------------~D~EGIa~~~~g~~~vs~ 87 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV---------------KDLETIEYIGDNQFVISD 87 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC---------------SSEEEEEECSTTEEEEEE
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC---------------CChHHeEEeCCCEEEEEE
Confidence 3334699999999766555 56778899999987 655444332211 146678888888766665
Q ss_pred eCCCeEEEEEcCCCee---eeeee------ccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeec---
Q 015438 246 SSDDCIYVYDLEANKL---SLRIL------AHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLM--- 313 (407)
Q Consensus 246 ~~dg~i~i~d~~~~~~---~~~~~------~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~--- 313 (407)
-.++.+.++++..... +.... ........++|. +.++.|+++.......+|.+... .....+..+.
T Consensus 88 E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d-~~~~~L~va~E~~p~~i~~~~g~-~~~~~l~i~~~~~ 165 (255)
T 3qqz_A 88 ERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYS-RQDHTFWFFKEKNPIEVYKVNGL-LSSNELHISKDKA 165 (255)
T ss_dssp TTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEE-TTTTEEEEEEESSSEEEEEEEST-TCSSCCEEEECHH
T ss_pred CCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEe-CCCCEEEEEECcCCceEEEEccc-ccCCceeeecchh
Confidence 5677899998765442 12221 234456899998 55555555555444455544311 0111222221
Q ss_pred ----cccCCeEEEEecCC-CCEEEEEeCCCcEEEEECCCCCCcccccCCCc-----cccccceeeeCCCCCCccCCCCCc
Q 015438 314 ----GHLEGITFIDSRGD-GRYLISNGKDQAIKLWDIRKMSSNASCNLGFR-----SYEWDYRWMDYPPQARDLKHPCDQ 383 (407)
Q Consensus 314 ----~~~~~i~~~~~s~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~~ 383 (407)
.+...+.+++++|. +++++.+.....|.++|... +.+........ .......-++|.++|++..++-.+
T Consensus 166 ~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g-~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n 244 (255)
T 3qqz_A 166 LQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVG-EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPN 244 (255)
T ss_dssp HHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTC-CEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTT
T ss_pred hccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCC-CEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCc
Confidence 12335789999985 45666666788899999664 34333322211 122355678999999887776667
Q ss_pred ceEEEeCC
Q 015438 384 SVATYKGH 391 (407)
Q Consensus 384 ~v~~~~gh 391 (407)
.+.+|+-.
T Consensus 245 ~~y~f~~~ 252 (255)
T 3qqz_A 245 RFYRFTPQ 252 (255)
T ss_dssp EEEEEEC-
T ss_pred eEEEEEec
Confidence 77777543
No 262
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.36 E-value=0.00046 Score=63.11 Aligned_cols=209 Identities=9% Similarity=-0.077 Sum_probs=126.3
Q ss_pred cCCCceEEEEECCCCCEEEEE-eCCCeEEEEEcCCCe---EEeEeeeccccceEEEEEEECCCCC-eEEEEeCCCeEEEE
Q 015438 122 QTTSRAYVSQFSADGSLFVAG-FQASQIRIYDVERGW---KIQKDILAKSLRWTVTDTSLSPDQR-HLVYASMSPIVHIV 196 (407)
Q Consensus 122 ~h~~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~dg~i~vw 196 (407)
.....+.+++|++.+..|+.+ ...+.|+.+++.... ..... ..........+++.+.+. +.++-...+.|.+.
T Consensus 109 ~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~--~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~ 186 (400)
T 3p5b_L 109 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV--ISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVA 186 (400)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEE--ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEE--EeCCCCCcccEEEEecCCceEEEECCCCeEEEE
Confidence 345678899999866655555 456789999886521 11111 111222467788887444 44455567889999
Q ss_pred ECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC--CCeEEEEEcCCCeeeeeeeccCCCeEE
Q 015438 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS--DDCIYVYDLEANKLSLRILAHTSDVNT 274 (407)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~v~~ 274 (407)
++.......+... .-.....|+++|.+..|+.... .+.|...++........+...-.....
T Consensus 187 ~~~g~~~~~l~~~----------------~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~g 250 (400)
T 3p5b_L 187 DTKGVKRKTLFRE----------------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNG 250 (400)
T ss_dssp CTTTCSEEEEEEC----------------SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEE
T ss_pred eCCCCceEEEEeC----------------CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEE
Confidence 8876543322210 1114678999997666665542 468999998754433333333356789
Q ss_pred EEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeee-c--cccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCc
Q 015438 275 VCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVL-M--GHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSN 351 (407)
Q Consensus 275 i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-~--~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 351 (407)
|++++..+.+.++-...+.|..+|+. +.....+ . +......++++. .+..+++-...+.|..+|..+++..
T Consensus 251 lavd~~~~~lY~aD~~~~~I~~~d~d-----G~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~ 324 (400)
T 3p5b_L 251 ITLDLLSGRLYWVDSKLHSISSIDVN-----GGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDV 324 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETT-----SCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCC
T ss_pred EEEEeCCCEEEEEECCCCEEEEEeCC-----CCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCce
Confidence 99985555555555567899999985 2222222 2 123345677773 3455666667788999998777766
Q ss_pred ccc
Q 015438 352 ASC 354 (407)
Q Consensus 352 ~~~ 354 (407)
..+
T Consensus 325 ~~i 327 (400)
T 3p5b_L 325 NLL 327 (400)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 263
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.35 E-value=0.00064 Score=60.93 Aligned_cols=195 Identities=10% Similarity=0.058 Sum_probs=119.5
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEE-eCCCeEEEEECCCCcee
Q 015438 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVDVGSGTME 204 (407)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~dg~i~vwd~~~~~~~ 204 (407)
...|.+..++ .+|+.+. ...|+..++...... ... ... ..+..++|++....|..+ ...+.|..+++......
T Consensus 35 ~~~C~~~~~~-~~ll~~~-~~~I~~i~~~g~~~~-~~~--~~~-~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~ 108 (349)
T 3v64_C 35 RRSCKALGPE-PVLLFAN-RIDIRQVLPHRSEYT-LLL--NNL-ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE 108 (349)
T ss_dssp SSCEEESSSC-CEEEEEC-BSCEEEECTTSCCEE-EEE--CSC-SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCcccccccC-ceeEeec-ccceEEEeCCCCeeE-Eee--cCC-CceEEEEEeccccEEEEEeccCCceEEEecCCCCce
Confidence 3445565663 3444443 456888888764322 211 122 237889999866666554 46788999998766433
Q ss_pred ccccccccccceeeeecCCCCccccEEEEEEeCCCCEE-EEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCC
Q 015438 205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL-VAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGH 283 (407)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~ 283 (407)
.+.... ......+++.+.+..| ++-...+.|.+.++........+...-.....+++.|..+.
T Consensus 109 ~~~~~~----------------~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ 172 (349)
T 3v64_C 109 EVVSTG----------------LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGT 172 (349)
T ss_dssp EEECSS----------------CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTE
T ss_pred EEEeCC----------------CCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCe
Confidence 221100 0134578888755544 45556678999998755433333333456789999855666
Q ss_pred EEEEEeCC-CcEEEEeCcccCCCCceeeeec-cccCCeEEEEecCCCCEEEEE-eCCCcEEEEECCC
Q 015438 284 LIYSGSDD-NLCKVWDRRCLNVKGKPAGVLM-GHLEGITFIDSRGDGRYLISN-GKDQAIKLWDIRK 347 (407)
Q Consensus 284 ~l~s~~~d-~~i~vwd~~~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~s~-~~dg~i~iwd~~~ 347 (407)
++++-... +.|..+++. +.....+. ........|+++|++..|..+ +..+.|..+|+..
T Consensus 173 ly~td~~~~~~I~r~~~d-----G~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 173 IYWTDWGNTPRIEASSMD-----GSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp EEEEECSSSCEEEEEETT-----SCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEeccCCCCEEEEEeCC-----CCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 66666555 788888875 33333332 223457899999866655554 4577899999875
No 264
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.33 E-value=0.00057 Score=59.97 Aligned_cols=197 Identities=12% Similarity=0.073 Sum_probs=111.4
Q ss_pred CCceEEEEECCCCCEEEEEeCCC--eEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCC
Q 015438 124 TSRAYVSQFSADGSLFVAGFQAS--QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSG 201 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~ 201 (407)
...+..++++++|+++++..... .|..++..++... ....... ......++..+++..+++-..++.|+++|..++
T Consensus 71 ~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~-~~~~~~~-~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 71 EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE-TLLTLPD-AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE-EEEECTT-CSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE-EEEeCCC-ccccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 45688999999999766654332 4777777766432 2221111 112344454555555555556889999998754
Q ss_pred ceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEe-eCCCeEEEEEcCC-Cee--eeeeeccCCCeEEEEe
Q 015438 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG-SSDDCIYVYDLEA-NKL--SLRILAHTSDVNTVCF 277 (407)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~i~d~~~-~~~--~~~~~~~~~~v~~i~~ 277 (407)
.............. ... +.-...+.+ +++++.|+++ ...+.|+.||+.. ++. ...+. .......+++
T Consensus 149 ~~~v~~~~~~~~~~-----~~~-~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~v 219 (306)
T 2p4o_A 149 SGSIWLEHPMLARS-----NSE-SVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAF 219 (306)
T ss_dssp EEEEEEECGGGSCS-----STT-CCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEE
T ss_pred cEeEEEECCccccc-----ccc-CCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEE
Confidence 21110000000000 000 011123445 7888766554 4568899999874 321 11121 1234567888
Q ss_pred cCCCCCEEEEEeCCCcEEEEeCcccCCCCcee--eeeccccCCeEEEEec---CCCCEEEEEeCC
Q 015438 278 GDESGHLIYSGSDDNLCKVWDRRCLNVKGKPA--GVLMGHLEGITFIDSR---GDGRYLISNGKD 337 (407)
Q Consensus 278 s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~--~~~~~~~~~i~~~~~s---~~~~~l~s~~~d 337 (407)
. ++|+++++....+.|.++|.. ++.. ..+......+++++|. |++..|+.++..
T Consensus 220 d-~dG~l~va~~~~~~V~~~~~~-----G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 220 D-VEGNLYGATHIYNSVVRIAPD-----RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp B-TTCCEEEECBTTCCEEEECTT-----CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred C-CCCCEEEEeCCCCeEEEECCC-----CCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 6 788887777778899999863 4432 2233233568999998 888777766644
No 265
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.33 E-value=0.00025 Score=71.07 Aligned_cols=238 Identities=9% Similarity=0.052 Sum_probs=141.3
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCce
Q 015438 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM 203 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~ 203 (407)
...|.++...++|.+. .|+.++-|..|+..++...............|.++...+++.+.+ |+.++-|..++..+++.
T Consensus 362 ~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~ 439 (781)
T 3v9f_A 362 NKVVSSVCDDGQGKLW-IGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKF 439 (781)
T ss_dssp SSCEEEEEECTTSCEE-EEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEE
T ss_pred CcceEEEEEcCCCCEE-EEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcE
Confidence 3569999999888755 455556688999765422111000011234688998887776544 66666788998877654
Q ss_pred eccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeecc-----CCCeEEEEec
Q 015438 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH-----TSDVNTVCFG 278 (407)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----~~~v~~i~~s 278 (407)
...... . .....|.++...+++. |.+|+. +-|..||..+++........ ...|.++...
T Consensus 440 ~~~~~~-~-------------~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d 503 (781)
T 3v9f_A 440 QIIELE-K-------------NELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQD 503 (781)
T ss_dssp EECCST-T-------------TCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEEC
T ss_pred EEeccC-C-------------CCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEc
Confidence 332210 0 1123688998888876 555555 45999998876543322212 3578888885
Q ss_pred CCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeecc----ccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccc
Q 015438 279 DESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMG----HLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASC 354 (407)
Q Consensus 279 ~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~----~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 354 (407)
.++.+. .|+.++-|..||.. .. ....+.. ....|.++...++|++.++. .+|.|..||..+.+.. .+
T Consensus 504 -~~g~lW-igt~~~Gl~~~~~~----~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~~~-~~ 574 (781)
T 3v9f_A 504 -SEGRFW-IGTFGGGVGIYTPD----MQ-LVRKFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARNFDYQ-VF 574 (781)
T ss_dssp -TTCCEE-EEESSSCEEEECTT----CC-EEEEECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTTCCCE-EE
T ss_pred -CCCCEE-EEEcCCCEEEEeCC----CC-eEEEccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEECCCCCcEE-Ec
Confidence 677655 45554447778875 32 2333321 13468899998888865544 4665588888765422 11
Q ss_pred cCCCccccccceeeeCCCCCCccCCCCCcceEEEe
Q 015438 355 NLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYK 389 (407)
Q Consensus 355 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~ 389 (407)
.....-..-.+..+...++|+++.+...+ +..|+
T Consensus 575 ~~~~gl~~~~i~~i~~d~~g~lW~~t~~G-l~~~~ 608 (781)
T 3v9f_A 575 QRKEGLPNTHIRAISEDKNGNIWASTNTG-ISCYI 608 (781)
T ss_dssp CGGGTCSCCCCCEEEECSSSCEEEECSSC-EEEEE
T ss_pred cccCCCCCceEEEEEECCCCCEEEEcCCc-eEEEE
Confidence 11111122235677778888887765443 34443
No 266
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.31 E-value=0.00088 Score=59.10 Aligned_cols=184 Identities=10% Similarity=-0.002 Sum_probs=111.0
Q ss_pred EEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEE-eCCCeEEEEECCCC----ceecccccccc
Q 015438 138 LFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVDVGSG----TMESLANVTEI 212 (407)
Q Consensus 138 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~dg~i~vwd~~~~----~~~~~~~~~~~ 212 (407)
+|+.+.. ..|+..|+.+...... .. ....+..++|++.+..|..+ ...+.|..+++... ....... .
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~-~~---~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~--~- 74 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSL-IP---NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS--R- 74 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEE-EC---SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC--S-
T ss_pred EEEEECC-CeEEEEECCCcceEeh-hc---CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe--C-
Confidence 4444433 5699999987643222 11 12247889999876555554 45689999998752 1111110 0
Q ss_pred ccceeeeecCCCCccccEEEEEEeCCCCEE-EEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCC
Q 015438 213 HDGLDFSAADDGGYSFGIFSLKFSTDGREL-VAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDD 291 (407)
Q Consensus 213 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d 291 (407)
.-.....+++++.+..| ++-...+.|.++|+........+.........+++.|..+.++++....
T Consensus 75 -------------~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~ 141 (316)
T 1ijq_A 75 -------------DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT 141 (316)
T ss_dssp -------------SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS
T ss_pred -------------CCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCC
Confidence 00134678888755544 4445678999999875443333333345678999985566555555443
Q ss_pred -CcEEEEeCcccCCCCceeeee-ccccCCeEEEEecCCCCEEEEEe-CCCcEEEEECCC
Q 015438 292 -NLCKVWDRRCLNVKGKPAGVL-MGHLEGITFIDSRGDGRYLISNG-KDQAIKLWDIRK 347 (407)
Q Consensus 292 -~~i~vwd~~~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~s~~-~dg~i~iwd~~~ 347 (407)
+.|..+++. +.....+ .........+++++++..|..+. ..+.|..+|+..
T Consensus 142 ~~~I~~~~~d-----G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 142 PAKIKKGGLN-----GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp SCEEEEEETT-----SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCeEEEEcCC-----CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 688888874 3333333 22334678999998776665554 567899999874
No 267
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.30 E-value=0.00045 Score=61.03 Aligned_cols=205 Identities=9% Similarity=-0.023 Sum_probs=124.2
Q ss_pred ceEEEEECCCCCEE-EEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeE-EEEeCCCeEEEEECCCCce
Q 015438 126 RAYVSQFSADGSLF-VAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHL-VYASMSPIVHIVDVGSGTM 203 (407)
Q Consensus 126 ~v~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~~~~~dg~i~vwd~~~~~~ 203 (407)
.+.+++|++.+..| .+-...+.|..+++..+........ .. -.....+++.+.+..| ++-...+.|.++++.....
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~-~~-l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~ 113 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV-SG-LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 113 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEE-EC-CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEc-CC-CCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE
Confidence 46689999865554 4545578899999876521111111 11 1135567887754444 4445667899999875432
Q ss_pred eccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEee--CCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCC
Q 015438 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS--SDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDES 281 (407)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~ 281 (407)
..+.. . .......++++|.+..|+... ..+.|+..++........+...-.....|++++..
T Consensus 114 ~~l~~-~---------------~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~ 177 (318)
T 3sov_A 114 KVLFW-Q---------------ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEE 177 (318)
T ss_dssp EEEEC-S---------------SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTT
T ss_pred EEEEe-C---------------CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccC
Confidence 22211 0 112467899998766666654 35789999987433222222223456889998556
Q ss_pred CCEEEEEeCCCcEEEEeCcccCCCCceeee-eccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccc
Q 015438 282 GHLIYSGSDDNLCKVWDRRCLNVKGKPAGV-LMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASC 354 (407)
Q Consensus 282 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 354 (407)
+.+.++-+..+.|..+|+. +..... ..+.......+++.. +..+.+-...+.|..+|..+++....+
T Consensus 178 ~~lY~aD~~~~~I~~~d~d-----G~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 178 QKLYWADAKLNFIHKSNLD-----GTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp TEEEEEETTTTEEEEEETT-----SCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CEEEEEECCCCEEEEEcCC-----CCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCceEEE
Confidence 6666666677899999985 222222 222344567777753 455556667789999999877765444
No 268
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.27 E-value=0.00049 Score=60.05 Aligned_cols=212 Identities=13% Similarity=0.127 Sum_probs=126.1
Q ss_pred EEEEECCCCCEEEEEe-CCCeEEEEEcCCCeEEeEeeec----cccceEEEEEEE---CCCCCeEEEEeC----------
Q 015438 128 YVSQFSADGSLFVAGF-QASQIRIYDVERGWKIQKDILA----KSLRWTVTDTSL---SPDQRHLVYASM---------- 189 (407)
Q Consensus 128 ~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~----~~~~~~v~~~~~---sp~~~~l~~~~~---------- 189 (407)
-+++|++....|..++ ..+.|..|+...+......... ......+..+.| .|+++++++...
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 4678988655555555 6899999999765332221111 111234689999 688887776432
Q ss_pred ---CCeEEEEECC---CCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCC-CeEEEEEcCCCeee
Q 015438 190 ---SPIVHIVDVG---SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-DCIYVYDLEANKLS 262 (407)
Q Consensus 190 ---dg~i~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g~i~i~d~~~~~~~ 262 (407)
+..|..+|+. +++......+....++.. .. .+........++..++|+..++++.. +.|...+.... .+
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~--~~-~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~ 171 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFE--KK-AGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TV 171 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHH--HH-HSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCcccccccc--cc-ccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EE
Confidence 5789999998 676654443322111000 00 00011248899999999988888888 88888887644 32
Q ss_pred eeeec------cCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCce--eeeec-cc---cCCeEEE-EecCCCC
Q 015438 263 LRILA------HTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKP--AGVLM-GH---LEGITFI-DSRGDGR 329 (407)
Q Consensus 263 ~~~~~------~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~--~~~~~-~~---~~~i~~~-~~s~~~~ 329 (407)
..+.. .....+.|+++ +++++|++....|.|..+|++. ... +..-. +. ......+ .-..+|+
T Consensus 172 ~~~~~~~~~~~~~~G~nGIv~~-pdg~~Liv~~~~g~L~~fD~~~----pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~ 246 (334)
T 2p9w_A 172 STFAWESGNGGQRPGYSGITFD-PHSNKLIAFGGPRALTAFDVSK----PYAWPEPVKINGDFGTLSGTEKIVTVPVGNE 246 (334)
T ss_dssp EEEEECCCCSSSCCSCSEEEEE-TTTTEEEEESSSSSEEEEECSS----SSCCCEECEESSCCCCCTTEEEEEEEEETTE
T ss_pred eeeeecCCCcccccCcceEEEe-CCCCEEEEEcCCCeEEEEcCCC----CcceeecccccCCcccccCcccccccccCCE
Confidence 32211 11236789998 7788777776699999999872 211 21110 21 1223343 3334777
Q ss_pred E-EEEEeCCCcEEEEECCCC
Q 015438 330 Y-LISNGKDQAIKLWDIRKM 348 (407)
Q Consensus 330 ~-l~s~~~dg~i~iwd~~~~ 348 (407)
. |++.+..+.+.+.+-...
T Consensus 247 vllV~~~~~~~~~l~S~DgW 266 (334)
T 2p9w_A 247 SVLVGARAPYAISFRSWDNW 266 (334)
T ss_dssp EEEEEEETTEEEEEECSSTT
T ss_pred EEEEEcCCCCEEEEECCCCc
Confidence 7 555556666666665543
No 269
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.26 E-value=0.00065 Score=61.81 Aligned_cols=193 Identities=10% Similarity=0.048 Sum_probs=116.8
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEE-eCCCeEEEEECCCCceecc
Q 015438 128 YVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVDVGSGTMESL 206 (407)
Q Consensus 128 ~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~dg~i~vwd~~~~~~~~~ 206 (407)
.|.+..+ ..+|+.+ ....|+.+++...... ... ... ..+..++|.+.+..|..+ ...+.|..+++.......+
T Consensus 80 ~C~~~~~-~~~l~~~-~~~~I~~i~~~~~~~~-~~~--~~~-~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~ 153 (386)
T 3v65_B 80 SCKALGP-EPVLLFA-NRIDIRQVLPHRSEYT-LLL--NNL-ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV 153 (386)
T ss_dssp CEEECSS-CCEEEEE-CBSCEEEECTTSCCCE-EEE--CSC-SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE
T ss_pred eECCccc-cceeEee-cCccceeeccCCCcEE-EEe--cCC-CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE
Confidence 3445555 3445444 3467888888765322 211 112 237889999866555554 4678899999886653322
Q ss_pred ccccccccceeeeecCCCCccccEEEEEEeCCCCEE-EEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEE
Q 015438 207 ANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL-VAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLI 285 (407)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l 285 (407)
.... ......+++++.+..| ++-...+.|.+.++........+.........|++.|..+.++
T Consensus 154 ~~~~----------------~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly 217 (386)
T 3v65_B 154 VSTG----------------LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIY 217 (386)
T ss_dssp ECSS----------------CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEE
T ss_pred EeCC----------------CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEE
Confidence 1100 0123567888755544 4445567899999875543333333345678999985566666
Q ss_pred EEEeCC-CcEEEEeCcccCCCCceeeee-ccccCCeEEEEecCCCCEEEEE-eCCCcEEEEECCC
Q 015438 286 YSGSDD-NLCKVWDRRCLNVKGKPAGVL-MGHLEGITFIDSRGDGRYLISN-GKDQAIKLWDIRK 347 (407)
Q Consensus 286 ~s~~~d-~~i~vwd~~~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~s~-~~dg~i~iwd~~~ 347 (407)
++-... +.|..+++. +.....+ .........|+|+|++..|..+ +..+.|..+|+..
T Consensus 218 ~td~~~~~~I~r~~~d-----G~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 218 WTDWGNTPRIEASSMD-----GSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp EEECSSSCEEEEEETT-----SCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred EeccCCCCEEEEEeCC-----CCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 665555 788888875 3333332 2233457899999866655544 4577899999875
No 270
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.24 E-value=0.00051 Score=68.82 Aligned_cols=241 Identities=11% Similarity=-0.004 Sum_probs=141.1
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEee------eccccceEEEEEEECCCCCeEEEEeCCCeEEEEE
Q 015438 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDI------LAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVD 197 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~------~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd 197 (407)
...|.++...++|.+- .|+.++-|..|+..++....... ...-....|.++...+++. |..|+.++-|..|+
T Consensus 312 ~~~v~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~ 389 (781)
T 3v9f_A 312 NASARYIFQDSFNNIW-IGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFE 389 (781)
T ss_dssp SSCEEEEEECSSCCEE-EEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEE
T ss_pred CCeEEEEEEeCCCCEE-EEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEE
Confidence 4679999999988754 46666778889877542211100 0111234589998888776 44566556688898
Q ss_pred CCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeee--ccCCCeEEE
Q 015438 198 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL--AHTSDVNTV 275 (407)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~i 275 (407)
..++....... . .......|.++...++|. |.+|+.++-|..+|..+++...... .....|.++
T Consensus 390 ~~~~~~~~~~~-~------------~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i 455 (781)
T 3v9f_A 390 NGKRVAIYNKE-N------------RELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVF 455 (781)
T ss_dssp TTEEEEECC------------------CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEE
T ss_pred CCCCeEEEccC-C------------CCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEE
Confidence 76554322210 0 001223689999888886 4557776679999988776432211 134678888
Q ss_pred EecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccc-----cCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCC
Q 015438 276 CFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGH-----LEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSS 350 (407)
Q Consensus 276 ~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~-----~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 350 (407)
... .++.+ ..|+. +-|..||.. .++........ ...|.++...++|++.+ |+.++-|..||..+.+.
T Consensus 456 ~~d-~~g~l-wigt~-~Gl~~~~~~----~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~ 527 (781)
T 3v9f_A 456 YED-KNKKI-WIGTH-AGVFVIDLA----SKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLV 527 (781)
T ss_dssp EEC-TTSEE-EEEET-TEEEEEESS----SSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEE
T ss_pred EEC-CCCCE-EEEEC-CceEEEeCC----CCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeE
Confidence 884 56654 45555 568889876 33322211111 35789999999888555 44444577788765432
Q ss_pred cccccCCCccccccceeeeCCCCCCccCCCCCcceEEEe
Q 015438 351 NASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYK 389 (407)
Q Consensus 351 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~ 389 (407)
.. +.....-....+.++...++++++.+...+.+..|+
T Consensus 528 ~~-~~~~~~l~~~~i~~i~~d~~g~lWi~T~~Glv~~~d 565 (781)
T 3v9f_A 528 RK-FNQYEGFCSNTINQIYRSSKGQMWLATGEGLVCFPS 565 (781)
T ss_dssp EE-ECTTTTCSCSCEEEEEECTTSCEEEEETTEEEEESC
T ss_pred EE-ccCCCCCCCCeeEEEEECCCCCEEEEECCCceEEEC
Confidence 11 111111123345667777777777655444334443
No 271
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.21 E-value=0.00015 Score=69.70 Aligned_cols=208 Identities=15% Similarity=0.124 Sum_probs=122.2
Q ss_pred CEEEEEeC------CCeEEEEEcCCCeEEeEeeecccc----------------------------------ceEE-EEE
Q 015438 137 SLFVAGFQ------ASQIRIYDVERGWKIQKDILAKSL----------------------------------RWTV-TDT 175 (407)
Q Consensus 137 ~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~----------------------------------~~~v-~~~ 175 (407)
..+++++. ++.|..+|..+|+.+......... ...+ ..+
T Consensus 161 g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~ 240 (571)
T 2ad6_A 161 DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWY 240 (571)
T ss_dssp TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCC
T ss_pred CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeE
Confidence 34555554 789999999999777654432110 0000 124
Q ss_pred EECCCCCeEEEEeCC----------------CeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCC
Q 015438 176 SLSPDQRHLVYASMS----------------PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG 239 (407)
Q Consensus 176 ~~sp~~~~l~~~~~d----------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 239 (407)
++.++...+..++.+ +.|..+|..+++..-...... ++...+ .....++. +....+|
T Consensus 241 a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~-~d~~d~-----~~~~~p~l-~~~~~~G 313 (571)
T 2ad6_A 241 AYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTP-HDEWDF-----AGVNQMVL-TDQPVNG 313 (571)
T ss_dssp EEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESST-TCSSCC-----CCCCCCEE-EEEEETT
T ss_pred EEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCC-Cccccc-----ccCCCCEE-EecccCC
Confidence 556666666665532 368999999988654333211 000000 00111222 2233467
Q ss_pred C---EEEEeeCCCeEEEEEcCCCeeeeeeeccC-------------CCe--------------------------EEEEe
Q 015438 240 R---ELVAGSSDDCIYVYDLEANKLSLRILAHT-------------SDV--------------------------NTVCF 277 (407)
Q Consensus 240 ~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------~~v--------------------------~~i~~ 277 (407)
+ .++.++.+|.++++|..+++.+-...... .++ ..+++
T Consensus 314 ~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~ 393 (571)
T 2ad6_A 314 KMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSY 393 (571)
T ss_dssp EEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEE
T ss_pred cEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceE
Confidence 4 57788899999999999998876553221 111 13466
Q ss_pred cCCCCCEEEEEe-------------------------------------CCCcEEEEeCcccCCCCceeeeeccccCCeE
Q 015438 278 GDESGHLIYSGS-------------------------------------DDNLCKVWDRRCLNVKGKPAGVLMGHLEGIT 320 (407)
Q Consensus 278 s~~~~~~l~s~~-------------------------------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~ 320 (407)
+ ++..+++... .++.|..||+. +++.+-.+... ..+.
T Consensus 394 d-p~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~----tG~~~W~~~~~-~~~~ 467 (571)
T 2ad6_A 394 D-PESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLT----TGKAKWTKWEK-FAAW 467 (571)
T ss_dssp E-TTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTT----TCCEEEEEEES-SCCC
T ss_pred C-CCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECC----CCCEEEEecCC-CCcc
Confidence 6 3444554443 34789999987 77776655422 2222
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCC
Q 015438 321 FIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLG 357 (407)
Q Consensus 321 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 357 (407)
...+...+..++.++.||.|+.||.++++.+..+...
T Consensus 468 ~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 468 GGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp SBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred ceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence 2222334567778999999999999999988776544
No 272
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.20 E-value=8.5e-05 Score=72.88 Aligned_cols=200 Identities=13% Similarity=0.146 Sum_probs=119.5
Q ss_pred EEEEECCCCCEEEEEeCCC-------------------eEEEEEcCCCeEEeEeeecccc------ceEEEEEEECCCCC
Q 015438 128 YVSQFSADGSLFVAGFQAS-------------------QIRIYDVERGWKIQKDILAKSL------RWTVTDTSLSPDQR 182 (407)
Q Consensus 128 ~~~~~s~~~~~l~~~~~dg-------------------~i~iwd~~~~~~~~~~~~~~~~------~~~v~~~~~sp~~~ 182 (407)
..++++|+..+++.+..++ .|..+|..+|+.+......... ..++....+..+++
T Consensus 233 ~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~ 312 (668)
T 1kv9_A 233 DSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGK 312 (668)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred cceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCc
Confidence 3578889888888887665 3999999999777664432110 01222222333665
Q ss_pred ---eEEEEeCCCeEEEEECCCCceeccccccccc--cce------ee--------------eecCCCCccccEEEEEEeC
Q 015438 183 ---HLVYASMSPIVHIVDVGSGTMESLANVTEIH--DGL------DF--------------SAADDGGYSFGIFSLKFST 237 (407)
Q Consensus 183 ---~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~--~~~------~~--------------~~~~~~~~~~~v~~~~~s~ 237 (407)
.++.++.+|.++++|..+++........... ..+ .. .....+++ .-..++++|
T Consensus 313 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~--~w~~~a~dp 390 (668)
T 1kv9_A 313 PRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAH--NWHSMSFNP 390 (668)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSS--CSSCCEEET
T ss_pred EEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCcccc--CCCcceECC
Confidence 6888999999999999999876332221100 000 00 00000011 011367777
Q ss_pred CCCEEEEe------------------------------------eCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCC
Q 015438 238 DGRELVAG------------------------------------SSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDES 281 (407)
Q Consensus 238 ~~~~l~~~------------------------------------~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~ 281 (407)
+..++++. ..+|.|..||+.+++.+-....+ .+.....+. ..
T Consensus 391 ~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~-t~ 468 (668)
T 1kv9_A 391 GTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP-THWNGGTLS-TA 468 (668)
T ss_dssp TTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES-SSCCCCEEE-ET
T ss_pred CCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC-CCCcCceeE-eC
Confidence 76665542 12478999999999987666533 233333333 35
Q ss_pred CCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCe-EEEEecCCCC-EEEEEe
Q 015438 282 GHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGI-TFIDSRGDGR-YLISNG 335 (407)
Q Consensus 282 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i-~~~~~s~~~~-~l~s~~ 335 (407)
+.+++.++.|+.|+.||.+ +++.+..+....... .-+.+..+|+ +++.++
T Consensus 469 gg~vf~g~~dg~l~a~d~~----tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 469 GNLVFQGTAAGQMHAYSAD----KGEALWQFEAQSGIVAAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp TTEEEEECTTSEEEEEETT----TCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred CCEEEEECCcccchhhhhh----cChhheEecCCCCcccCceEEEECCEEEEEEEe
Confidence 6788889999999999998 888887776432211 2233444666 444443
No 273
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.20 E-value=7.9e-05 Score=74.21 Aligned_cols=156 Identities=8% Similarity=0.023 Sum_probs=94.8
Q ss_pred EEEEEEEC-CCCCeEEEEeC-CC----eEEEEECCCC-ceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEE
Q 015438 171 TVTDTSLS-PDQRHLVYASM-SP----IVHIVDVGSG-TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELV 243 (407)
Q Consensus 171 ~v~~~~~s-p~~~~l~~~~~-dg----~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 243 (407)
.+....|| |||++|+.+.. +| .|+++|+.++ +.... .+. .....+.|+|||+.|+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~-----------------~~~~~~~WspDg~~l~ 236 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVS-----------------GTNGEIVWGPDHTSLF 236 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEE-----------------EECSCCEECSSTTEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-ccc-----------------CceeeEEEecCCCEEE
Confidence 57889999 99999987543 22 5999999988 52110 000 0123578999999888
Q ss_pred EeeCC-----CeEEEEEcCCCeee--eeee-ccCCCeEEEEecCCCCCEEEEEeC---CCcEEEEeCcccCCCCce-eee
Q 015438 244 AGSSD-----DCIYVYDLEANKLS--LRIL-AHTSDVNTVCFGDESGHLIYSGSD---DNLCKVWDRRCLNVKGKP-AGV 311 (407)
Q Consensus 244 ~~~~d-----g~i~i~d~~~~~~~--~~~~-~~~~~v~~i~~s~~~~~~l~s~~~---d~~i~vwd~~~~~~~~~~-~~~ 311 (407)
....+ ..|+++++.+++.. ..+. ........+.|+ +++++|+..+. ...|.++|+... .+.. +..
T Consensus 237 y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~S-pDg~~l~~~~~~~~~~~l~~~d~~~~--~~~~~~~~ 313 (751)
T 2xe4_A 237 YVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKA-ADTNTLCIGSQSPETAEVHLLDLRKG--NAHNTLEI 313 (751)
T ss_dssp EEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEEC-TTSSEEEEEEECSSCEEEEEEESSSC--TTCCCEEE
T ss_pred EEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEEC-CCCCEEEEEecCCCCceEEEEECCCC--CCCceeEE
Confidence 77665 36888999876422 2222 223346678998 77887766552 346888888621 1122 122
Q ss_pred e-ccccCCeEEEEecCCCCEEEEEeCC----CcEEEEECCC
Q 015438 312 L-MGHLEGITFIDSRGDGRYLISNGKD----QAIKLWDIRK 347 (407)
Q Consensus 312 ~-~~~~~~i~~~~~s~~~~~l~s~~~d----g~i~iwd~~~ 347 (407)
+ ........++.|+..+.+++....+ ..|..+|+.+
T Consensus 314 l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 314 VRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp SSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred eecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 3 2334455666665444444444443 3577777764
No 274
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.16 E-value=0.0018 Score=59.16 Aligned_cols=186 Identities=10% Similarity=-0.026 Sum_probs=113.9
Q ss_pred CEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEE-eCCCeEEEEECCCCc----eeccccccc
Q 015438 137 SLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVDVGSGT----MESLANVTE 211 (407)
Q Consensus 137 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~dg~i~vwd~~~~~----~~~~~~~~~ 211 (407)
.+|+.+. ...|+..+++....... . . ....+..++|++.+..|..+ ...+.|+.+++.... ...+..
T Consensus 84 ~~ll~~~-~~~I~~i~l~~~~~~~~-~--~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~--- 155 (400)
T 3p5b_L 84 AYLFFTN-RHEVRKMTLDRSEYTSL-I--P-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS--- 155 (400)
T ss_dssp CEEEEEE-TTEEEEECTTSCSCEEE-E--C-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC---
T ss_pred ceeEEec-cceeEEEccCCcceeEe-c--c-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe---
Confidence 3455443 46899999886532221 1 1 22347899999866666555 456788888886522 111110
Q ss_pred cccceeeeecCCCCccccEEEEEEeCCCC-EEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeC
Q 015438 212 IHDGLDFSAADDGGYSFGIFSLKFSTDGR-ELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSD 290 (407)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~ 290 (407)
........+++.+.+. +.++-...+.|.+.++........+.........|++.|..+.++++-..
T Consensus 156 -------------~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~ 222 (400)
T 3p5b_L 156 -------------RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG 222 (400)
T ss_dssp -------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECS
T ss_pred -------------CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCC
Confidence 0112467889988444 44555567899999998655444444344567899998556655555433
Q ss_pred -CCcEEEEeCcccCCCCceeeee-ccccCCeEEEEecCCCCEEEEEe-CCCcEEEEECCCC
Q 015438 291 -DNLCKVWDRRCLNVKGKPAGVL-MGHLEGITFIDSRGDGRYLISNG-KDQAIKLWDIRKM 348 (407)
Q Consensus 291 -d~~i~vwd~~~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~ 348 (407)
.+.|...++. +.....+ .........|++++++..|..+. ..+.|..+|+...
T Consensus 223 ~~~~I~~~~~d-----G~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 223 TPAKIKKGGLN-----GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp SSCCEEEEETT-----SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCEEEEEeCC-----CCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 3788888885 3333333 22335678999998777666554 5678999998753
No 275
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.16 E-value=0.00036 Score=64.52 Aligned_cols=154 Identities=10% Similarity=0.062 Sum_probs=94.3
Q ss_pred ceEEEEECC-CCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCC-C----eEEEEECC
Q 015438 126 RAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-P----IVHIVDVG 199 (407)
Q Consensus 126 ~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-g----~i~vwd~~ 199 (407)
....++++| ++..|+++...+.|+.+|+..+. +..... .......++|+++++.|+++... + .+.+++..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~-v~~~~~---~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEY-VSTVYS---GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTE-EEEEEC---CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCE-EEEEec---CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence 457889998 45556655555889999998763 222222 22347889999999966666542 1 33334432
Q ss_pred CCceeccccccccccceeeeecCCCCccccEEEEEEeC-CCCEEEEeeCCCeEEEEEcCCCeeeeeeec-cCCCeEEEEe
Q 015438 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSDDCIYVYDLEANKLSLRILA-HTSDVNTVCF 277 (407)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~i~~ 277 (407)
+.......+.. ......++++| ++.++++-..++.|+.++..++........ .......++|
T Consensus 214 -g~~~~~~~l~~---------------~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~ 277 (430)
T 3tc9_A 214 -SGFKVITELTK---------------GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQF 277 (430)
T ss_dssp -GTSCSEEEEEE---------------CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEE
T ss_pred -Cceeeeeeecc---------------CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEE
Confidence 22110000000 01345688999 676666666778999999987654222221 2234678999
Q ss_pred cCCCCC-EEEEEeCCCcEEEEeCc
Q 015438 278 GDESGH-LIYSGSDDNLCKVWDRR 300 (407)
Q Consensus 278 s~~~~~-~l~s~~~d~~i~vwd~~ 300 (407)
+ ++++ ++++-...+.|..++..
T Consensus 278 ~-pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 278 H-PSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp C-TTSSEEEEEETTTTEEEEEEEE
T ss_pred c-CCCCEEEEEECCCCEEEEEeCC
Confidence 7 7788 55555567899998865
No 276
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.16 E-value=0.0014 Score=58.18 Aligned_cols=235 Identities=11% Similarity=0.020 Sum_probs=126.7
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCce
Q 015438 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM 203 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~ 203 (407)
...+.++.|++ +..+++ +..+.|.. ..+.++..............+..+.+.+++..++++ .++.|.. ....++.
T Consensus 79 ~~~~~~i~~~~-~~~~~~-g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~t 153 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWIV-GEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKN 153 (327)
T ss_dssp CCEEEEEEEET-TEEEEE-EETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSS
T ss_pred CccEEEEEecC-CeEEEE-ECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCC
Confidence 45789999986 444444 45664443 334443333322211122346677776677666555 4554322 1222221
Q ss_pred -eccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEc--CCCeeeeeeeccCCCeEEEEecCC
Q 015438 204 -ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDL--EANKLSLRILAHTSDVNTVCFGDE 280 (407)
Q Consensus 204 -~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~--~~~~~~~~~~~~~~~v~~i~~s~~ 280 (407)
..... +....+..+.+.+++.+++++...+..+-.|- .+.+.+. ......+..+.+. +
T Consensus 154 W~~~~~----------------~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~-~ 214 (327)
T 2xbg_A 154 WQALVQ----------------EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFT-P 214 (327)
T ss_dssp EEEEEC----------------SCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEEC-T
T ss_pred CEEeec----------------CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEEC-C
Confidence 11100 12235788999999887776654433333442 3334332 2345678889987 5
Q ss_pred CCCEEEEEeCCCcEEEEeCcccCCCCceeeeec----cccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccC
Q 015438 281 SGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLM----GHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNL 356 (407)
Q Consensus 281 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~----~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 356 (407)
++.++ .++.+|.+++.+.. .++.-..+. .....+..+.+.+++..++++. +|.| ++..+.++.=.....
T Consensus 215 ~g~~~-~~~~~G~~~~s~~D----~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~ 287 (327)
T 2xbg_A 215 DGRLW-MIVNGGKIAFSDPD----NSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVD 287 (327)
T ss_dssp TSCEE-EEETTTEEEEEETT----EEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGG
T ss_pred CCCEE-EEeCCceEEEecCC----CCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCc
Confidence 66655 55567888777421 122211111 1223588999998877666654 6766 444444433221110
Q ss_pred CCccccccceeeeCCCCCCccCCCCCcceEEEeC
Q 015438 357 GFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKG 390 (407)
Q Consensus 357 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~g 390 (407)
.......+..+.|.+++++++++.++.+..+++
T Consensus 288 -~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 288 -VKKVPSNFYKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp -GTTSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred -cCCCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence 001123456677767778888888888888876
No 277
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.15 E-value=0.0019 Score=64.16 Aligned_cols=209 Identities=9% Similarity=-0.046 Sum_probs=123.7
Q ss_pred CCCceEEEEECCCCCEEE-EEeCCCeEEEEEcCCCeE--EeEeeeccccceEEEEEEECCCCCeEEE-EeCCCeEEEEEC
Q 015438 123 TTSRAYVSQFSADGSLFV-AGFQASQIRIYDVERGWK--IQKDILAKSLRWTVTDTSLSPDQRHLVY-ASMSPIVHIVDV 198 (407)
Q Consensus 123 h~~~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~dg~i~vwd~ 198 (407)
....+.+++|++....|+ +-...+.|+.+++..... ..... ..........|++.+.++.|+. -...+.|.+.++
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~v-i~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~l 500 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV-ISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 500 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE-ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEE-EecCCCCcceeeeeecCCcEEEEecCCCeEEEEeC
Confidence 345678999998655544 444567888888875311 01111 1111223567888877655554 456789999998
Q ss_pred CCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC--CCeEEEEEcCCCeeeeeeeccCCCeEEEE
Q 015438 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS--DDCIYVYDLEANKLSLRILAHTSDVNTVC 276 (407)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~v~~i~ 276 (407)
.......+.. . .......|+++|.+..|+.... .+.|.+.++........+...-.....|+
T Consensus 501 dG~~~~~l~~-~---------------~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLa 564 (791)
T 3m0c_C 501 KGVKRKTLFR-E---------------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGIT 564 (791)
T ss_dssp TSSSEEEEEE-C---------------TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEE
T ss_pred CCCeEEEEEe-C---------------CCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEE
Confidence 7554322221 0 1114678999997666666542 36899999875544333333335678999
Q ss_pred ecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeee-cc--ccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCccc
Q 015438 277 FGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVL-MG--HLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNAS 353 (407)
Q Consensus 277 ~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-~~--~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 353 (407)
+.+..+.++++-...+.|..+++. +.....+ .. ......+|++.. ++++++-...+.|...|..+++....
T Consensus 565 vD~~~~~LYwaD~~~~~I~~~d~d-----G~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~~~~~ 638 (791)
T 3m0c_C 565 LDLLSGRLYWVDSKLHSISSIDVN-----GGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNL 638 (791)
T ss_dssp EETTTTEEEEEETTTTEEEEEETT-----SCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEE
T ss_pred EecCCCeEEEEeCCCCcEEEEecC-----CCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCcceEE
Confidence 975566555555566789999985 2222222 21 223445677643 34555555678899898877766554
Q ss_pred c
Q 015438 354 C 354 (407)
Q Consensus 354 ~ 354 (407)
+
T Consensus 639 l 639 (791)
T 3m0c_C 639 L 639 (791)
T ss_dssp E
T ss_pred e
Confidence 4
No 278
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.12 E-value=0.0014 Score=57.68 Aligned_cols=202 Identities=14% Similarity=0.206 Sum_probs=120.1
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCC----CC---eEEEEeC---CCeEEEEECC--CC
Q 015438 134 ADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD----QR---HLVYASM---SPIVHIVDVG--SG 201 (407)
Q Consensus 134 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~----~~---~l~~~~~---dg~i~vwd~~--~~ 201 (407)
|...+++.....+-+.+||+ +|+.+..... +.++.+..-|+ ++ +++++.. +++|.+|++. ++
T Consensus 38 p~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~-----g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~ 111 (355)
T 3amr_A 38 PQNSKLITTNKKSGLVVYSL-DGKMLHSYNT-----GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG 111 (355)
T ss_dssp GGGCEEEEEETTTEEEEEET-TSCEEEEECC-----SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC
T ss_pred CCccEEEEEcCCCCEEEEcC-CCcEEEEccC-----CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC
Confidence 34566777778889999999 6666655321 23555555552 22 2333333 5789999774 44
Q ss_pred ceecccccc-ccccceeeeecCCCCccccEEEEEE--eCC-CC-EEEEeeCCCeEEEEEcC-------CCeeeeeeeccC
Q 015438 202 TMESLANVT-EIHDGLDFSAADDGGYSFGIFSLKF--STD-GR-ELVAGSSDDCIYVYDLE-------ANKLSLRILAHT 269 (407)
Q Consensus 202 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~--s~~-~~-~l~~~~~dg~i~i~d~~-------~~~~~~~~~~~~ 269 (407)
....+.... .... ....+..+++ +|. ++ ++++...+|.+..|++. +.+.++++.. .
T Consensus 112 ~l~~i~~~~~pv~t-----------~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-g 179 (355)
T 3amr_A 112 TLQSMTDPDHPIAT-----------AINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-N 179 (355)
T ss_dssp CEEECSCTTSCEEC-----------CCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-S
T ss_pred ceeeccccccCcCC-----------CCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-C
Confidence 322221100 0000 0014555666 664 44 67888889999999983 3456677754 4
Q ss_pred CCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccC-CCCceeeeec-cc-cCCeEEEEe--cCCCC-EEEEEe-CCCcEEE
Q 015438 270 SDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLN-VKGKPAGVLM-GH-LEGITFIDS--RGDGR-YLISNG-KDQAIKL 342 (407)
Q Consensus 270 ~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~-~~~~~~~~~~-~~-~~~i~~~~~--s~~~~-~l~s~~-~dg~i~i 342 (407)
+.+..+... +....|+.+-.+.-|..+|.+... .+.+.+..+. ++ ...+..|++ .++++ ||++++ .++++.+
T Consensus 180 sq~EgcvvD-d~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~V 258 (355)
T 3amr_A 180 SQTEGMAAD-DEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAI 258 (355)
T ss_dssp SCEEEEEEE-TTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEE
T ss_pred CCcceEEEc-CCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEE
Confidence 577888885 566678888888667666654211 1233444332 22 236888887 45555 666666 6789999
Q ss_pred EECC-CCCCcccc
Q 015438 343 WDIR-KMSSNASC 354 (407)
Q Consensus 343 wd~~-~~~~~~~~ 354 (407)
||.. +.+.+..+
T Consensus 259 ydr~~~~~~vg~f 271 (355)
T 3amr_A 259 YDRQGKNKYVADF 271 (355)
T ss_dssp EESSTTCCEEEEE
T ss_pred EECCCCCcEEEEE
Confidence 9997 55544444
No 279
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.12 E-value=0.00098 Score=59.81 Aligned_cols=244 Identities=11% Similarity=0.008 Sum_probs=126.1
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCe-EEeEeeeccccceEEEEEEECCC---CCeEEEEeC----C----Ce
Q 015438 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGW-KIQKDILAKSLRWTVTDTSLSPD---QRHLVYASM----S----PI 192 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~v~~~~~sp~---~~~l~~~~~----d----g~ 192 (407)
.....++|.|+|+++++ ..+|.|++++. ++. .+...............++++|+ +..|.++.. + ..
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 34679999999985554 56699999973 443 11111011112234789999997 445554432 3 56
Q ss_pred EEEEECCCCc--eeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC-------------CCeEEEEEcC
Q 015438 193 VHIVDVGSGT--MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-------------DDCIYVYDLE 257 (407)
Q Consensus 193 i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-------------dg~i~i~d~~ 257 (407)
|..|+..... ......+ ... +. ....| ....|.|.|+|.+.++.+. .|.|..++..
T Consensus 107 v~r~~~~~~~~~~~~~~~l---~~~--~~--~~~~h--~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d 177 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTL---IDG--IP--GAYIH--NGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE 177 (354)
T ss_dssp EEEEEECSSSCCEEEEEEE---EEE--EE--CCSSC--CCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT
T ss_pred EEEEEECCCCcCcCccEEE---EEc--CC--CCCCc--CCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC
Confidence 7777766441 1100000 000 00 11122 2356899999986665332 2567766664
Q ss_pred CC--------eeeeeeeccCCCeEEEEecCCCCCEEEEEeCCC---cEEEEeCccc--------C----CCCceeeeecc
Q 015438 258 AN--------KLSLRILAHTSDVNTVCFGDESGHLIYSGSDDN---LCKVWDRRCL--------N----VKGKPAGVLMG 314 (407)
Q Consensus 258 ~~--------~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~---~i~vwd~~~~--------~----~~~~~~~~~~~ 314 (407)
.. .....-.++. ....++|+|.+++++++-...+ .|.+...... . ....++..+..
T Consensus 178 G~~p~~npf~~~~i~a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~ 256 (354)
T 3a9g_A 178 GRPPADNPFPNSPIWSYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGS 256 (354)
T ss_dssp SCCCTTSSSTTCCEEEECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTT
T ss_pred CCCCCCCCCCCCcEEEEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCC
Confidence 32 0011112333 3468999854777766644322 2433321100 0 00123333311
Q ss_pred ccCCeEEEEec-------CCCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCCC
Q 015438 315 HLEGITFIDSR-------GDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHP 380 (407)
Q Consensus 315 ~~~~i~~~~~s-------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 380 (407)
....+..++|. .+|.++++.-..+.|...++...........-.......+..+.+.|+|.++.+.
T Consensus 257 ~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~ 329 (354)
T 3a9g_A 257 ETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILIST 329 (354)
T ss_dssp CCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEE
T ss_pred CCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEE
Confidence 23457788883 5677777776778899998875322211000011112346778888888766543
No 280
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.11 E-value=0.00099 Score=61.56 Aligned_cols=200 Identities=14% Similarity=0.210 Sum_probs=115.7
Q ss_pred CCCceEEEEECCCCCEEEEEeCC---C-eEEEEEcCCCeEEeEeeeccccceEEEEEEECC-CCCeEEEEeCCCeEEEEE
Q 015438 123 TTSRAYVSQFSADGSLFVAGFQA---S-QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP-DQRHLVYASMSPIVHIVD 197 (407)
Q Consensus 123 h~~~v~~~~~s~~~~~l~~~~~d---g-~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~dg~i~vwd 197 (407)
.......++|+++|+++++.... . .+...+...+........ .......++++| ++.+.++-..++.|+.++
T Consensus 180 ~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~---~~~~P~giavd~~~G~lyv~d~~~~~V~~~d 256 (433)
T 4hw6_A 180 NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLC---NARGAKTCAVHPQNGKIYYTRYHHAMISSYD 256 (433)
T ss_dssp CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEE---ECSSBCCCEECTTTCCEEECBTTCSEEEEEC
T ss_pred CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeecccccc---ccCCCCEEEEeCCCCeEEEEECCCCEEEEEE
Confidence 34568899999999955444321 1 233333322211001111 111245688899 666555555678899999
Q ss_pred CCCCce-eccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEe-eCCCeEEEEEcC--CCee--eeeeecc---
Q 015438 198 VGSGTM-ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG-SSDDCIYVYDLE--ANKL--SLRILAH--- 268 (407)
Q Consensus 198 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~i~d~~--~~~~--~~~~~~~--- 268 (407)
..++.. ..+.... ....-..++|+|+++.|+++ ...+.|+.++.. ++.. ...+.+.
T Consensus 257 ~~~g~~~~~~~~~~---------------~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~ 321 (433)
T 4hw6_A 257 PATGTLTEEEVMMD---------------TKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSS 321 (433)
T ss_dssp TTTCCEEEEEEECS---------------CCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTC
T ss_pred CCCCeEEEEEeccC---------------CCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCC
Confidence 886654 2111110 00123469999999955554 456889998865 2321 1112111
Q ss_pred ------------CCCeEEEEec--------CCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccc-------------
Q 015438 269 ------------TSDVNTVCFG--------DESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGH------------- 315 (407)
Q Consensus 269 ------------~~~v~~i~~s--------~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~------------- 315 (407)
-.....+++. +.+++++++-...+.|+.++. .+.. ..+.+.
T Consensus 322 ~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-----~G~v-~t~~G~g~~~~~G~~dG~~ 395 (433)
T 4hw6_A 322 PGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-----EGRV-TTYAGRGNSREWGYVDGEL 395 (433)
T ss_dssp CCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-----TSEE-EEEECCCTTCSSCCBCEET
T ss_pred CccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-----CCCE-EEEEeCCCCCccccCCCcc
Confidence 1235668882 367777777777789999985 3322 222211
Q ss_pred -----cCCeEEEEec-CCCCEEEEEeCCCcEEEEECC
Q 015438 316 -----LEGITFIDSR-GDGRYLISNGKDQAIKLWDIR 346 (407)
Q Consensus 316 -----~~~i~~~~~s-~~~~~l~s~~~dg~i~iwd~~ 346 (407)
-.....|+++ ++|.++++-..++.|+.++++
T Consensus 396 ~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 396 RSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred ccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 1246789999 677777776678889988764
No 281
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.11 E-value=0.00041 Score=66.74 Aligned_cols=195 Identities=16% Similarity=0.136 Sum_probs=114.2
Q ss_pred EEEECCCCCEEEEEeC--------------------C----CeEEEEEcCCCeEEeEeeeccc-------cceEEEEEEE
Q 015438 129 VSQFSADGSLFVAGFQ--------------------A----SQIRIYDVERGWKIQKDILAKS-------LRWTVTDTSL 177 (407)
Q Consensus 129 ~~~~s~~~~~l~~~~~--------------------d----g~i~iwd~~~~~~~~~~~~~~~-------~~~~v~~~~~ 177 (407)
.++++|+..+++.+.. | +.|..+|..+|+.+........ ...++. +..
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~ 328 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDY 328 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Eee
Confidence 4567777777776653 2 5899999999977765433211 111222 222
Q ss_pred C-CCCC---eEEEEeCCCeEEEEECCCCceeccccccccc---c------ceee-----e-----------------ecC
Q 015438 178 S-PDQR---HLVYASMSPIVHIVDVGSGTMESLANVTEIH---D------GLDF-----S-----------------AAD 222 (407)
Q Consensus 178 s-p~~~---~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~---~------~~~~-----~-----------------~~~ 222 (407)
. .+++ .++.++.+|.++++|..+++........... . +..+ . +..
T Consensus 329 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~ 408 (582)
T 1flg_A 329 KAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPF 408 (582)
T ss_dssp ECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCT
T ss_pred ecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCC
Confidence 1 4664 6788899999999999999875443322100 0 0000 0 000
Q ss_pred CCCccccEEEEEEeCCCCEEEEee---------------------------------CCCeEEEEEcCCCeeeeeeeccC
Q 015438 223 DGGYSFGIFSLKFSTDGRELVAGS---------------------------------SDDCIYVYDLEANKLSLRILAHT 269 (407)
Q Consensus 223 ~~~~~~~v~~~~~s~~~~~l~~~~---------------------------------~dg~i~i~d~~~~~~~~~~~~~~ 269 (407)
.+++ .-..++++|+..++++.. .+|.|.-||+.+++.+-+.....
T Consensus 409 ~Gg~--~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~ 486 (582)
T 1flg_A 409 LGGK--NWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL 486 (582)
T ss_dssp TCSS--CSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS
T ss_pred cccc--CCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC
Confidence 0000 011356666655554432 25789999999998876654322
Q ss_pred CCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCe-EEEEecCCCCEEE
Q 015438 270 SDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGI-TFIDSRGDGRYLI 332 (407)
Q Consensus 270 ~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i-~~~~~s~~~~~l~ 332 (407)
++..-... ..+.+++.++.|+.++.||.+ +++.+..+......+ .-+.+..+|+..+
T Consensus 487 -~~~~g~~~-tagglvf~g~~dg~l~A~D~~----tG~~lW~~~~~~g~~a~P~~y~~~G~qYv 544 (582)
T 1flg_A 487 -PLWAGVLA-TAGNLVFTGTGDGYFKAFDAK----SGKELWKFQTGSGIVSPPITWEQDGEQYL 544 (582)
T ss_dssp -CCCSCCEE-ETTTEEEEECTTSEEEEEETT----TCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred -CCcccceE-eCCCEEEEECCCCcEEEEECC----CCCEEEEecCCCCcccCceEEEECCEEEE
Confidence 22221111 235678889999999999998 899888776433221 2255666786433
No 282
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.09 E-value=0.00077 Score=62.28 Aligned_cols=198 Identities=10% Similarity=0.031 Sum_probs=113.1
Q ss_pred ceEEEEECCC--CCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCC----e-EEEEEC
Q 015438 126 RAYVSQFSAD--GSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP----I-VHIVDV 198 (407)
Q Consensus 126 ~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg----~-i~vwd~ 198 (407)
....++|+|+ +..|+.+...+.|+.+++.++... .... .......++|+++++ |+++...+ . +...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~-~~~~---~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVD-IKTT---NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEE-EECC---CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEE-Eeec---CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEEC
Confidence 4568999995 344555544488999999776432 2221 222488999999999 44444321 1 222322
Q ss_pred CCCceeccccccccccceeeeecCCCCccccEEEEEEeC-CCCEEEEeeCCCeEEEEEcCCCeeeeeee-cc-CCCeEEE
Q 015438 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSDDCIYVYDLEANKLSLRIL-AH-TSDVNTV 275 (407)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~-~~~v~~i 275 (407)
..+. ..... +. .-.....++++| ++.+.++-..++.|+.+|..++.....+. .. ...-..+
T Consensus 215 ~~~~-~~~~~---------~~------~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~i 278 (433)
T 4hw6_A 215 ASGF-TERLS---------LC------NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHI 278 (433)
T ss_dssp GGTT-CCEEE---------EE------ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEE
T ss_pred CCCe-ecccc---------cc------ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccE
Confidence 1111 00000 00 001345688999 66655555567889999998776523322 11 2223469
Q ss_pred EecCCCCC-EEEEEeCCCcEEEEeCcccCCCCceeeeecc---------------ccCCeEEEEe---------cCCCCE
Q 015438 276 CFGDESGH-LIYSGSDDNLCKVWDRRCLNVKGKPAGVLMG---------------HLEGITFIDS---------RGDGRY 330 (407)
Q Consensus 276 ~~s~~~~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~---------------~~~~i~~~~~---------s~~~~~ 330 (407)
+|+ ++++ ++++-...+.|+.++.............+.+ .-.....+++ .++|.+
T Consensus 279 a~d-pdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~l 357 (433)
T 4hw6_A 279 VWH-PTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDF 357 (433)
T ss_dssp EEC-TTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEE
T ss_pred EEe-CCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcE
Confidence 998 6777 5555556789999886411000000111111 1124677999 778887
Q ss_pred EEEEeCCCcEEEEEC
Q 015438 331 LISNGKDQAIKLWDI 345 (407)
Q Consensus 331 l~s~~~dg~i~iwd~ 345 (407)
+++-...+.|+.++.
T Consensus 358 yvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 358 YFCDRDSHTVRVLTP 372 (433)
T ss_dssp EEEETTTTEEEEECT
T ss_pred EEEECCCCEEEEECC
Confidence 777777889999984
No 283
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.07 E-value=0.00018 Score=66.47 Aligned_cols=153 Identities=10% Similarity=0.110 Sum_probs=97.0
Q ss_pred EEEEEECC-CCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC-CC
Q 015438 172 VTDTSLSP-DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-DD 249 (407)
Q Consensus 172 v~~~~~sp-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg 249 (407)
...++++| ++..|.++...+.|+.+|+..+....+.. .......++|++++++|+++.. ++
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-----------------~~~~P~~ia~d~~G~~lyvad~~~~ 201 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-----------------GLSKVRTICWTHEADSMIITNDQNN 201 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-----------------CCSCEEEEEECTTSSEEEEEECCSC
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-----------------CCCCcceEEEeCCCCEEEEEeCCCC
Confidence 56788998 45566666555889999988765433321 1114778999999996666554 22
Q ss_pred ----eEEEEEcCCCeee--eeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeec-cccCCeEEE
Q 015438 250 ----CIYVYDLEANKLS--LRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLM-GHLEGITFI 322 (407)
Q Consensus 250 ----~i~i~d~~~~~~~--~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~-~~~~~i~~~ 322 (407)
.+.+++.. +... ..+. .......++++|.++.++++-..++.|..+|.. .+....... +.......+
T Consensus 202 ~~~~~v~~~~~~-g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~----~~~~~~~~~~~~~~~P~gi 275 (430)
T 3tc9_A 202 NDRPNNYILTRE-SGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFT----TQETTPLFTIQDSGWEFHI 275 (430)
T ss_dssp TTSEEEEEEEGG-GTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETT----TTEEEEEEECSSSSCCEEE
T ss_pred cccceEEEEeCC-Cceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECC----CCcEEEEEEcCCCCcceeE
Confidence 34445543 3221 2222 233456788975478888777778899999986 333211111 122346789
Q ss_pred EecCCCCEEE-EEeCCCcEEEEECCC
Q 015438 323 DSRGDGRYLI-SNGKDQAIKLWDIRK 347 (407)
Q Consensus 323 ~~s~~~~~l~-s~~~dg~i~iwd~~~ 347 (407)
+|+|+|++|+ +-...+.|..++...
T Consensus 276 a~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 276 QFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 9999999554 445678899988764
No 284
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.06 E-value=0.0015 Score=57.71 Aligned_cols=187 Identities=9% Similarity=0.017 Sum_probs=110.4
Q ss_pred EEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEE-EeCCCeEEEEECCCCceeccccccccccce
Q 015438 138 LFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVY-ASMSPIVHIVDVGSGTMESLANVTEIHDGL 216 (407)
Q Consensus 138 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 216 (407)
+|+.+ ....|+.++++......... .. ....+..+.|.+.+..|.. -...+.|..+++............
T Consensus 6 ~ll~~-~~~~I~~i~l~~~~~~~~~~-~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~------ 76 (318)
T 3sov_A 6 LLLYA-NRRDLRLVDATNGKENATIV-VG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS------ 76 (318)
T ss_dssp EEEEE-CEEEEEEEETTCTTSCCEEE-EE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEE------
T ss_pred EEEEE-ccCeEEEEECCCCceEEEEE-ec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcC------
Confidence 34444 34679999998752111111 11 1124778999986555554 456778999998765321110000
Q ss_pred eeeecCCCCccccEEEEEEeCCCC-EEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEe-CCCcE
Q 015438 217 DFSAADDGGYSFGIFSLKFSTDGR-ELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGS-DDNLC 294 (407)
Q Consensus 217 ~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~-~d~~i 294 (407)
.-.....+++.+.+. +.++-...+.|.++++........+.........+++.|..+.++++-. ..+.|
T Consensus 77 ---------~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I 147 (318)
T 3sov_A 77 ---------GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKI 147 (318)
T ss_dssp ---------CCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEE
T ss_pred ---------CCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEE
Confidence 001345688887554 4455556788999998754433323234456789999755565555542 35788
Q ss_pred EEEeCcccCCCCceeeee-ccccCCeEEEEecCCCCEEEEE-eCCCcEEEEECCC
Q 015438 295 KVWDRRCLNVKGKPAGVL-MGHLEGITFIDSRGDGRYLISN-GKDQAIKLWDIRK 347 (407)
Q Consensus 295 ~vwd~~~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~s~-~~dg~i~iwd~~~ 347 (407)
...++. +.....+ ...-.....|++++++..|..+ +..+.|..+|+..
T Consensus 148 ~r~~~d-----G~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 148 ERAGMD-----GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp EEEETT-----SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEEcC-----CCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC
Confidence 888874 3333332 2223456899999966665554 4678899999874
No 285
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.04 E-value=0.00082 Score=64.64 Aligned_cols=156 Identities=19% Similarity=0.185 Sum_probs=91.5
Q ss_pred CeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEe-CCCC---EEEEeeCCCeEEEEEcCCCeeeeeee
Q 015438 191 PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFS-TDGR---ELVAGSSDDCIYVYDLEANKLSLRIL 266 (407)
Q Consensus 191 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~ 266 (407)
+.|.-+|..+++..-...... ++...+. ....++. +... .+|+ .++.++.+|.++++|.++++.+..+.
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~-~d~wd~~-----~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 363 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTP-NDAWDFS-----GNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFP 363 (582)
T ss_dssp SEEEEECTTTCCEEEEEESST-TCCSCCC-----CCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ceEEEEeCCCCCEEEEEeCCC-CCccccc-----CCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccc
Confidence 589999999988754433211 0000000 0111222 2222 4674 78889999999999999998876543
Q ss_pred ccC-------------CCe--------------------------------EEEEecCCCCCEEEEEe------------
Q 015438 267 AHT-------------SDV--------------------------------NTVCFGDESGHLIYSGS------------ 289 (407)
Q Consensus 267 ~~~-------------~~v--------------------------------~~i~~s~~~~~~l~s~~------------ 289 (407)
... .++ ..++++|..+.+++...
T Consensus 364 ~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~ 443 (582)
T 1flg_A 364 FVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVS 443 (582)
T ss_dssp SSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCC
T ss_pred cccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeeccccc
Confidence 321 000 12355533343333221
Q ss_pred --------------------CCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCC
Q 015438 290 --------------------DDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMS 349 (407)
Q Consensus 290 --------------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 349 (407)
.+|.|.-||+. +++.+-..... .++..-.....+..++.++.||.++.||.++++
T Consensus 444 ~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~----tG~~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~ 518 (582)
T 1flg_A 444 YTKGSAYLGMGFRIKRMYDDHVGSLRAMDPV----SGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGK 518 (582)
T ss_dssp CCTTSCCCCEEEEEEESCSSCSEEEEEECTT----TCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred ccCCCceeccceeecCCCCCCcceEEEEECC----CCCEEEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEECCCCC
Confidence 25789999997 77766555422 122111112246678889999999999999999
Q ss_pred CcccccCCC
Q 015438 350 SNASCNLGF 358 (407)
Q Consensus 350 ~~~~~~~~~ 358 (407)
.+..+....
T Consensus 519 ~lW~~~~~~ 527 (582)
T 1flg_A 519 ELWKFQTGS 527 (582)
T ss_dssp EEEEEECSS
T ss_pred EEEEecCCC
Confidence 988775543
No 286
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.04 E-value=0.0061 Score=53.95 Aligned_cols=235 Identities=11% Similarity=0.077 Sum_probs=121.1
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeec-cccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCce
Q 015438 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILA-KSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM 203 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~ 203 (407)
..+.+|.|.+.+..+++| ..|.| +...+.++........ ......+.++.|.+ +..++ ++..+.|.. ....++.
T Consensus 36 ~~~~~v~~~~~~~~~~~G-~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~t 110 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWLVG-VNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQS 110 (327)
T ss_dssp SCEEEEEESSSSCEEEEE-TTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTSS
T ss_pred CcEEEEEECCCCcEEEEc-CCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCCeEEE-ECCCCCC
Confidence 478999999888877754 56755 3344444322222111 12234688899976 44444 455665433 2222321
Q ss_pred eccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeee-eccCCCeEEEEecCCCC
Q 015438 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRI-LAHTSDVNTVCFGDESG 282 (407)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~v~~i~~s~~~~ 282 (407)
=....... .+...+..+.+.+++..++++ .+|.|+.- ...++.-..+ ......+..+.+. +++
T Consensus 111 W~~~~~~~-------------~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~-~~~ 174 (327)
T 2xbg_A 111 WSQIPLDP-------------KLPGSPRLIKALGNGSAEMIT-NVGAIYRT-KDSGKNWQALVQEAIGVMRNLNRS-PSG 174 (327)
T ss_dssp CEECCCCT-------------TCSSCEEEEEEEETTEEEEEE-TTCCEEEE-SSTTSSEEEEECSCCCCEEEEEEC-TTS
T ss_pred ceECcccc-------------CCCCCeEEEEEECCCCEEEEe-CCccEEEE-cCCCCCCEEeecCCCcceEEEEEc-CCC
Confidence 11110000 011246677777777666655 45654332 2223222222 2345678899997 567
Q ss_pred CEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCcccc
Q 015438 283 HLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYE 362 (407)
Q Consensus 283 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 362 (407)
.+++.+...+..+-.|-.- ..-+.+. ......+..+.+.++++.++ ++.+|.+++++...++.-...........
T Consensus 175 ~~~~~g~~G~~~~S~d~gG--~tW~~~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~ 249 (327)
T 2xbg_A 175 EYVAVSSRGSFYSTWEPGQ--TAWEPHN--RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNS 249 (327)
T ss_dssp CEEEEETTSSEEEEECTTC--SSCEEEE--CCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCC
T ss_pred cEEEEECCCcEEEEeCCCC--CceeECC--CCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCC
Confidence 7776665444444444310 0222222 23456788999999887654 55678887774322221111110000112
Q ss_pred ccceeeeCCCCCCccCCCCCcce
Q 015438 363 WDYRWMDYPPQARDLKHPCDQSV 385 (407)
Q Consensus 363 ~~v~~~~~~~~~~~l~~~~~~~v 385 (407)
..+..+.+.+++.+++++.++.+
T Consensus 250 ~~~~~v~~~~~~~~~~~g~~g~i 272 (327)
T 2xbg_A 250 VGFLDLAYRTPNEVWLAGGAGAL 272 (327)
T ss_dssp SCEEEEEESSSSCEEEEESTTCE
T ss_pred cceEEEEecCCCEEEEEeCCCeE
Confidence 34566777777777777666544
No 287
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.04 E-value=0.00055 Score=59.77 Aligned_cols=161 Identities=12% Similarity=0.118 Sum_probs=108.0
Q ss_pred EEEEEECCCCCeEEEEe-CCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEE---eCCCCEEEEee-
Q 015438 172 VTDTSLSPDQRHLVYAS-MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKF---STDGRELVAGS- 246 (407)
Q Consensus 172 v~~~~~sp~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---s~~~~~l~~~~- 246 (407)
.-++.|.+....|..++ ..+.|..|+...+....+ ...... ..+.....+..|.| .|+++++++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s--------~~g~~~~~~sGl~~~~~D~~grL~vv~~~ 85 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGAS--------SNGDGEQQMSGLSLLTHDNSKRLFAVMKN 85 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTC--------CSSCCSEEEEEEEESSSSSCCEEEEEEEE
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCcc--------ccCCCcceeeEEEEeccCCCCcEEEEEcc
Confidence 44578988656666665 789999999876644333 211100 00011124578999 68877777543
Q ss_pred ------------CCCeEEEEEcC---CCeeeeeee--c-----------cCCCeEEEEecCCCCCEEEEEeCC-CcEEEE
Q 015438 247 ------------SDDCIYVYDLE---ANKLSLRIL--A-----------HTSDVNTVCFGDESGHLIYSGSDD-NLCKVW 297 (407)
Q Consensus 247 ------------~dg~i~i~d~~---~~~~~~~~~--~-----------~~~~v~~i~~s~~~~~~l~s~~~d-~~i~vw 297 (407)
.+..|..||+. +++.+.... . .......++.. ++|+..++++.. +.|...
T Consensus 86 ~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD-~~GnaYVt~s~~~~~I~rV 164 (334)
T 2p9w_A 86 AKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQD-RDGNSYVAFALGMPAIARV 164 (334)
T ss_dssp TTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEEC-TTSCEEEEEEESSCEEEEE
T ss_pred cccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEEC-CCCCEEEeCCCCCCeEEEE
Confidence 25779999999 777665443 1 11247899995 899999999988 888887
Q ss_pred eCcccCCCCceeeeec------cccCCeEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 015438 298 DRRCLNVKGKPAGVLM------GHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRK 347 (407)
Q Consensus 298 d~~~~~~~~~~~~~~~------~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 347 (407)
+.. ++.+..+. ......+.|+++|+|+.|++....|.|..+|+++
T Consensus 165 ~pd-----G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 165 SAD-----GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CTT-----SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred eCC-----CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 764 33333221 1122467999999999998887799999999984
No 288
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.00 E-value=0.00081 Score=60.31 Aligned_cols=241 Identities=14% Similarity=0.023 Sum_probs=123.4
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEE--eEeeeccccceEEEEEEECCC---CCeEEEEeC-C-----CeEE
Q 015438 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGWKI--QKDILAKSLRWTVTDTSLSPD---QRHLVYASM-S-----PIVH 194 (407)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~~v~~~~~sp~---~~~l~~~~~-d-----g~i~ 194 (407)
....++|.|+|+++++ ..+|.|.+++ ++... ...............++|+|+ +..|.++.. . ..|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 4679999999996555 5679999998 34221 111111112335789999998 555554432 2 5788
Q ss_pred EEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC-------------CCeEEEEEcCCC--
Q 015438 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-------------DDCIYVYDLEAN-- 259 (407)
Q Consensus 195 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-------------dg~i~i~d~~~~-- 259 (407)
.++...+.......+. .. +.......|. ...++|.|+|.+.++.+. .|.|.-++....
T Consensus 109 r~~~~~~~~~~~~~l~---~~--~p~~~~~~h~--~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p 181 (352)
T 2ism_A 109 RLRHLGERGVLDRVVL---DG--IPARPHGLHS--GGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPA 181 (352)
T ss_dssp EEEECSSCEEEEEEEE---EE--ECCCTTCCCC--CCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBC
T ss_pred EEEeCCCCcCceEEEE---Ee--CCCCCCCCcC--CceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCC
Confidence 8887643221100000 00 0000111232 357999999975555322 256777776531
Q ss_pred ----------eeeeee-eccCCCeEEEEecCCCCCEEEEEeCCCc--------EEEEeCccc-C-----------CCCce
Q 015438 260 ----------KLSLRI-LAHTSDVNTVCFGDESGHLIYSGSDDNL--------CKVWDRRCL-N-----------VKGKP 308 (407)
Q Consensus 260 ----------~~~~~~-~~~~~~v~~i~~s~~~~~~l~s~~~d~~--------i~vwd~~~~-~-----------~~~~~ 308 (407)
.....+ .++ .....++|+|.++.++++-...+. |.+...... . ....+
T Consensus 182 ~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p 260 (352)
T 2ism_A 182 PGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDP 260 (352)
T ss_dssp TTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCC
T ss_pred CCCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCC
Confidence 011111 122 235678998547777766544333 333321100 0 00123
Q ss_pred eeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccc--cCCCccccccceeeeCCCCCCccCC
Q 015438 309 AGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASC--NLGFRSYEWDYRWMDYPPQARDLKH 379 (407)
Q Consensus 309 ~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~ 379 (407)
+..+. +......++| .+|..+++.-..+.|...++......... ..........+..+++.|+|.++.+
T Consensus 261 ~~~~~-~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~ 331 (352)
T 2ism_A 261 LYFWP-QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVT 331 (352)
T ss_dssp SEECT-TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEE
T ss_pred eEecC-CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEE
Confidence 33442 2334667787 46777666666778888887754321000 0000011234677888888866644
No 289
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.95 E-value=0.00058 Score=65.56 Aligned_cols=196 Identities=16% Similarity=0.100 Sum_probs=114.3
Q ss_pred EEEECCCCCEEEEEeCC----------------CeEEEEEcCCCeEEeEeeeccc-------cceEEEEEEECCCCC---
Q 015438 129 VSQFSADGSLFVAGFQA----------------SQIRIYDVERGWKIQKDILAKS-------LRWTVTDTSLSPDQR--- 182 (407)
Q Consensus 129 ~~~~s~~~~~l~~~~~d----------------g~i~iwd~~~~~~~~~~~~~~~-------~~~~v~~~~~sp~~~--- 182 (407)
.+++.++...++.+..+ +.|..+|..+|+.+........ ...++. +...++++
T Consensus 239 ~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~ 317 (571)
T 2ad6_A 239 WYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTP 317 (571)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEE
T ss_pred eEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEE
Confidence 35677766666666532 3599999999977665433211 112222 22224674
Q ss_pred eEEEEeCCCeEEEEECCCCceeccccccccc---------cceee----------------eecCCCCccccEEEEEEeC
Q 015438 183 HLVYASMSPIVHIVDVGSGTMESLANVTEIH---------DGLDF----------------SAADDGGYSFGIFSLKFST 237 (407)
Q Consensus 183 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~---------~~~~~----------------~~~~~~~~~~~v~~~~~s~ 237 (407)
.++.++.+|.++++|..+++........... .+..+ .+...+++. -..++++|
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~--w~~~a~dp 395 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHN--QGVDSYDP 395 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSC--SCBCEEET
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccC--CCCceECC
Confidence 5777889999999999999875443322100 00000 000001110 12467888
Q ss_pred CCCEEEEee-------------------------------------CCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCC
Q 015438 238 DGRELVAGS-------------------------------------SDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDE 280 (407)
Q Consensus 238 ~~~~l~~~~-------------------------------------~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~ 280 (407)
+..++++.. .+|.|+.||+.+++.+-++... ..+....+. .
T Consensus 396 ~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~-t 473 (571)
T 2ad6_A 396 ESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLY-T 473 (571)
T ss_dssp TTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEE-E
T ss_pred CCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccceeEE-E
Confidence 777776653 3478999999999887666432 222222222 2
Q ss_pred CCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCC-eEEEEecCCCCEEEE
Q 015438 281 SGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEG-ITFIDSRGDGRYLIS 333 (407)
Q Consensus 281 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~-i~~~~~s~~~~~l~s 333 (407)
.+.+++.++.|+.|+.+|.+ +++.+..+...... -.-+.+..+|+.++.
T Consensus 474 ~gg~v~~g~~dg~l~a~D~~----tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 474 KGGLVWYATLDGYLKALDNK----DGKELWNFKMPSGGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp TTTEEEEECTTSEEEEEETT----TCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECC----CCCEEEEEeCCCCcEeeeEEEEECCEEEEE
Confidence 35677789999999999998 88888777633211 122335567764443
No 290
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.94 E-value=0.00084 Score=64.60 Aligned_cols=208 Identities=13% Similarity=0.093 Sum_probs=119.5
Q ss_pred CCeEEEEEcCCCeEEeEeeeccccc----------------------------------eEE-EEEEECCCCCeEEEEeC
Q 015438 145 ASQIRIYDVERGWKIQKDILAKSLR----------------------------------WTV-TDTSLSPDQRHLVYASM 189 (407)
Q Consensus 145 dg~i~iwd~~~~~~~~~~~~~~~~~----------------------------------~~v-~~~~~sp~~~~l~~~~~ 189 (407)
++.|+.+|..+|+.+.......... ..+ ..+++.+...+++.++.
T Consensus 181 ~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g 260 (599)
T 1w6s_A 181 RGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTG 260 (599)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred CCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCC
Confidence 7899999999997776544322110 000 12445566777777665
Q ss_pred C----------------CeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEe-CCC---CEEEEeeCCC
Q 015438 190 S----------------PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFS-TDG---RELVAGSSDD 249 (407)
Q Consensus 190 d----------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~---~~l~~~~~dg 249 (407)
+ +.|.-+|..+++..-....... +.-++ .....++. +... .+| ..++.++.+|
T Consensus 261 ~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~-d~wd~-----d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G 333 (599)
T 1w6s_A 261 NPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPH-DEWDY-----AGVNVMML-SEQKDKDGKARKLLTHPDRNG 333 (599)
T ss_dssp CCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTT-CSSCC-----CCCCCCEE-EEEECTTSCEEEEEEEECTTS
T ss_pred CCccccCcccCCCccccceEEEEeCCCCceeeEeecCCC-ccccc-----cCCCccEE-EeccccCCcEEEEEEEECCCc
Confidence 4 3799999999887543332210 00000 00111221 2222 467 4677788999
Q ss_pred eEEEEEcCCCeeeeeeeccC-------------CCe--------------------------EEEEecCCCCCEEEEEe-
Q 015438 250 CIYVYDLEANKLSLRILAHT-------------SDV--------------------------NTVCFGDESGHLIYSGS- 289 (407)
Q Consensus 250 ~i~i~d~~~~~~~~~~~~~~-------------~~v--------------------------~~i~~s~~~~~~l~s~~- 289 (407)
.++++|.++++.+-...... .++ ..++++ ++..++++..
T Consensus 334 ~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~d-p~~~~~yv~~~ 412 (599)
T 1w6s_A 334 IVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYD-PKRELFFMGIN 412 (599)
T ss_dssp EEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEE-TTTTEEEEEEE
T ss_pred EEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCC-CCCCEEEEecc
Confidence 99999999998876543111 011 134555 3333433321
Q ss_pred --------------------------------------CCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEE
Q 015438 290 --------------------------------------DDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYL 331 (407)
Q Consensus 290 --------------------------------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 331 (407)
.+|.|.-||+. +++.+-.... ..++..-.+...+..+
T Consensus 413 ~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~----tG~~~W~~~~-~~~~~~g~~~tagg~v 487 (599)
T 1w6s_A 413 HICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAI----TGDYKWEKME-RFAVWGGTMATAGDLV 487 (599)
T ss_dssp CEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTT----TCCEEEEEEE-SSCCCSBCEEETTTEE
T ss_pred ccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECC----CCCEEeEecC-CCCccCcceEecCCEE
Confidence 34678888887 6666655431 1111111122256677
Q ss_pred EEEeCCCcEEEEECCCCCCcccccCCCccccccc
Q 015438 332 ISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDY 365 (407)
Q Consensus 332 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v 365 (407)
+.++.|+.++.||.++++.+..+.........++
T Consensus 488 f~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~ 521 (599)
T 1w6s_A 488 FYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPM 521 (599)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEECSSCCCSCCE
T ss_pred EEECCCCeEEEEECCCCCEEEEeeCCCCcEeccE
Confidence 8899999999999999999887755443333333
No 291
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.87 E-value=0.0038 Score=58.11 Aligned_cols=204 Identities=10% Similarity=0.065 Sum_probs=114.7
Q ss_pred ceEEEEECCC-CC-EEEEEeCCCeEEEEEcCCCeEEeEeeec-cccceEEEEEEE-------CCCCCeEEEEeCCC----
Q 015438 126 RAYVSQFSAD-GS-LFVAGFQASQIRIYDVERGWKIQKDILA-KSLRWTVTDTSL-------SPDQRHLVYASMSP---- 191 (407)
Q Consensus 126 ~v~~~~~s~~-~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~v~~~~~-------sp~~~~l~~~~~dg---- 191 (407)
....|+|+|. +. ++++-...+.|++.|++++... .+... .........++| +++++.|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~-~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLS-SPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEE-EEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEE-EEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 5679999983 44 4444444467999998876333 32222 112234889999 99999777665543
Q ss_pred ---eEEEEECCC-CceeccccccccccceeeeecCCCCccccEEEEEEeCC-CCEEEEeeCCCeEEEEEcC-------CC
Q 015438 192 ---IVHIVDVGS-GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-GRELVAGSSDDCIYVYDLE-------AN 259 (407)
Q Consensus 192 ---~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~i~d~~-------~~ 259 (407)
.|.+++... +.......... +.. . .....++++|+ +.++++-..++.|+.+|+. ++
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~------v~~-----~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg 286 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQL------IAA-----Y-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNG 286 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEE------EEE-----E-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTT
T ss_pred cCceEEEEecCCCCceeeccccee------ecc-----C-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCc
Confidence 266665333 22210000000 000 0 02456788995 4555566678889999997 55
Q ss_pred ee-----------eeee-e-ccCCCeEEEEecCCCCCE-EEEEeCCCcEEEEeCcccCCCCce--eeeeccc--------
Q 015438 260 KL-----------SLRI-L-AHTSDVNTVCFGDESGHL-IYSGSDDNLCKVWDRRCLNVKGKP--AGVLMGH-------- 315 (407)
Q Consensus 260 ~~-----------~~~~-~-~~~~~v~~i~~s~~~~~~-l~s~~~d~~i~vwd~~~~~~~~~~--~~~~~~~-------- 315 (407)
.. ...+ . ........|+|+ +++++ +++-+..+.|+.+|.... .+.. ...+.+.
T Consensus 287 ~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~-p~G~~lYvaD~~~h~I~kid~dg~--~~~~~~~~~~aG~~g~~G~~D 363 (496)
T 3kya_A 287 GSWDPIVKNNPNTFKQLFTIADPSWEFQIFIH-PTGKYAYFGVINNHYFMRSDYDEI--KKEFITPYNFVGGYKQSGYRD 363 (496)
T ss_dssp CCCCCBGGGCTTTEEEEEECSSSSCCEEEEEC-TTSSEEEEEETTTTEEEEEEEETT--TTEECCCEEEEEBTTBCCCBC
T ss_pred eeecccccccccccceeEecCCCCCceEEEEc-CCCCEEEEEeCCCCEEEEEecCCC--cceecccEEecCCCCCCcccC
Confidence 43 1121 1 223345789998 77885 455556788999765410 1111 0111111
Q ss_pred -------cCCeE-EEEec-------CCCCEEEEEeCCCcEEEEEC
Q 015438 316 -------LEGIT-FIDSR-------GDGRYLISNGKDQAIKLWDI 345 (407)
Q Consensus 316 -------~~~i~-~~~~s-------~~~~~l~s~~~dg~i~iwd~ 345 (407)
-.... .++.. ++|.++++=.....|+.++.
T Consensus 364 G~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~ 408 (496)
T 3kya_A 364 DVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP 408 (496)
T ss_dssp CBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT
T ss_pred CcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC
Confidence 11244 45554 56777777777889999983
No 292
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.86 E-value=0.00018 Score=70.75 Aligned_cols=206 Identities=10% Similarity=-0.069 Sum_probs=118.1
Q ss_pred CceEEEEECCCCCEEEEEe-CCCeEEEEEcCCC---eEEeEeeeccccceEEEEEEECCCCCeE-EEEeCCCeEEEEECC
Q 015438 125 SRAYVSQFSADGSLFVAGF-QASQIRIYDVERG---WKIQKDILAKSLRWTVTDTSLSPDQRHL-VYASMSPIVHIVDVG 199 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~---~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~~~~~dg~i~vwd~~ 199 (407)
..+.+++|++.+..|+.+. ..+.|+.+++... ...... ..........+++.+.+..| ++-...+.|.++++.
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~--i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV--ISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCB--CCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSS
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEE--EeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecC
Confidence 3466889998776666553 4578999998751 111111 11111124567887654444 444556789999987
Q ss_pred CCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC--CCeEEEEEcCCCeeeeeeeccCCCeEEEEe
Q 015438 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS--DDCIYVYDLEANKLSLRILAHTSDVNTVCF 277 (407)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~ 277 (407)
......+.... ......|+++|.+.+|+.+.. .+.|.++++........+...-.....|+|
T Consensus 484 g~~~~~l~~~~----------------~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlav 547 (699)
T 1n7d_A 484 GVKRKTLFREQ----------------GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITL 547 (699)
T ss_dssp SCCEEEECCCS----------------SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEE
T ss_pred CCceEEEEeCC----------------CCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEE
Confidence 65433222110 012456788886655555432 267888887643322222222334578999
Q ss_pred cCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeec---cccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccc
Q 015438 278 GDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLM---GHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASC 354 (407)
Q Consensus 278 s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 354 (407)
+|..+.++++-+..+.|.++|+. +.....+. ........|++..+ .++++....+.|..+|..+++....+
T Consensus 548 d~~~~~LY~aD~~~~~I~~~d~d-----G~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 548 DLLSGRLYWVDSKLHSISSIDVN-----GGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp CTTTCCEEEEETTTTEEEEECSS-----SSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECC
T ss_pred eccCCEEEEEecCCCeEEEEccC-----CCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEe
Confidence 86667777777778899999985 22222221 11223445666543 45556666789999998776654443
No 293
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.85 E-value=0.00066 Score=66.49 Aligned_cols=207 Identities=15% Similarity=0.061 Sum_probs=112.4
Q ss_pred CceEEEEECCCCCEEEEEeC-CCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEe-CC-----CeEEEEE
Q 015438 125 SRAYVSQFSADGSLFVAGFQ-ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS-MS-----PIVHIVD 197 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d-----g~i~vwd 197 (407)
....++++.++++++++|+. +..+.+||..++..... ........ -.+++..+++++++.|+ .+ ..+.+||
T Consensus 243 ~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~-~~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd 320 (656)
T 1k3i_A 243 MFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPG-PDMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYS 320 (656)
T ss_dssp CSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEEC-CCCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEE
T ss_pred CccccccCCCCCCEEEeCCCCCCceEEecCcCCceeEC-CCCCcccc-ccceEEecCCeEEEEeCcccCCcccccceEeC
Confidence 33445788899999999984 45899999987632221 11111111 23345567999999988 34 4799999
Q ss_pred CCCCceeccc-----ccccc-------cc----------ceee-----------eecCCC------C---------cccc
Q 015438 198 VGSGTMESLA-----NVTEI-------HD----------GLDF-----------SAADDG------G---------YSFG 229 (407)
Q Consensus 198 ~~~~~~~~~~-----~~~~~-------~~----------~~~~-----------~~~~~~------~---------~~~~ 229 (407)
..+++...+. ..... .. +..+ ...... . ....
T Consensus 321 ~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~ 400 (656)
T 1k3i_A 321 PSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMC 400 (656)
T ss_dssp TTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBT
T ss_pred CCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCC
Confidence 9877654321 00000 00 0000 000000 0 0001
Q ss_pred EEEEEEeC-CCCEEEEeeCCC-----------eEEEEEcCCCeeeeee--eccCCCe-EEEEecCCCCCEEEEEeCC---
Q 015438 230 IFSLKFST-DGRELVAGSSDD-----------CIYVYDLEANKLSLRI--LAHTSDV-NTVCFGDESGHLIYSGSDD--- 291 (407)
Q Consensus 230 v~~~~~s~-~~~~l~~~~~dg-----------~i~i~d~~~~~~~~~~--~~~~~~v-~~i~~s~~~~~~l~s~~~d--- 291 (407)
-.++.|.. +++++++|+.++ .|.+||..+.+-.... ..+.... .+.+.. +++++++.|+.+
T Consensus 401 ~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l-~~g~i~v~GG~~~~~ 479 (656)
T 1k3i_A 401 GNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVL-PDGSTFITGGQRRGI 479 (656)
T ss_dssp CEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEEC-TTSCEEEECCBSBCC
T ss_pred CceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEEC-CCCCEEEECCcccCc
Confidence 23344433 677788887542 6888888776543322 1122222 233443 688999998854
Q ss_pred --------CcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeC
Q 015438 292 --------NLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGK 336 (407)
Q Consensus 292 --------~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~ 336 (407)
..+.+||.... ....+..+...........+.|+|+.++.||.
T Consensus 480 ~~~~~~~~~~v~~ydp~t~--~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 480 PFEDSTPVFTPEIYVPEQD--TFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp TTCCCSBCCCCEEEEGGGT--EEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CcCCCCcccceEEEcCCCC--ceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 46899998621 11111112112222334556799999999985
No 294
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.81 E-value=0.0064 Score=58.85 Aligned_cols=205 Identities=9% Similarity=-0.035 Sum_probs=119.6
Q ss_pred CCceEEEEECCCCCEEEEEe-CCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEE-EeCCCeEEEEECCCC
Q 015438 124 TSRAYVSQFSADGSLFVAGF-QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVY-ASMSPIVHIVDVGSG 201 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~dg~i~vwd~~~~ 201 (407)
-..+.+++|++.+..|+.+. ..+.|..++++........ ... .-.....+++.+.+..|+. -...+.|.+.++...
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v-~~~-~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~ 116 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNV-VVS-GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 116 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEE-ECS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEE-EeC-CCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCC
Confidence 34577999999776666554 4678988988754211111 111 1124788999886555554 456789999998765
Q ss_pred ceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC--CCeEEEEEcCCCeeeeeeeccCCCeEEEEecC
Q 015438 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS--DDCIYVYDLEANKLSLRILAHTSDVNTVCFGD 279 (407)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~ 279 (407)
....+.. . .-.....|+++|.+..|+.... .+.|...++............-.....|++.+
T Consensus 117 ~~~~l~~-~---------------~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~ 180 (619)
T 3s94_A 117 LRKVLFW-Q---------------ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDY 180 (619)
T ss_dssp SCEEEEC-S---------------SCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEET
T ss_pred CEEEEEe-C---------------CCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEc
Confidence 4322211 0 0113567899997666655543 46788888764433222223344678999985
Q ss_pred CCCCEEEEEeCCCcEEEEeCcccCCCCceeeee-ccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcc
Q 015438 280 ESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVL-MGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNA 352 (407)
Q Consensus 280 ~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~ 352 (407)
..++++++-...+.|..+|+. +.....+ .+......++++..+ ..+++-...+.|...|..+++...
T Consensus 181 ~~~~LY~aD~~~~~I~~~~~d-----G~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~ 248 (619)
T 3s94_A 181 EEQKLYWADAKLNFIHKSNLD-----GTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLR 248 (619)
T ss_dssp TTTEEEEEETTTCCEEEESSS-----CCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCE
T ss_pred cCCEEEEEeCCCCeEEEecCC-----CCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccE
Confidence 566666666667889999985 2222222 212222346677655 444555567889999988776543
No 295
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.80 E-value=0.0084 Score=59.59 Aligned_cols=185 Identities=10% Similarity=-0.021 Sum_probs=110.2
Q ss_pred EEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEE-EEeCCCeEEEEECCCCce----ecccccccc
Q 015438 138 LFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLV-YASMSPIVHIVDVGSGTM----ESLANVTEI 212 (407)
Q Consensus 138 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~-~~~~dg~i~vwd~~~~~~----~~~~~~~~~ 212 (407)
+|+.+ ....|+..++....... +. .. ...+..++|.+....|+ +-...+.|+.+++..... ..+..
T Consensus 397 ~Ll~a-n~~~Ir~i~l~~~~~~~-l~--~~-~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~---- 467 (791)
T 3m0c_C 397 YLFFT-NRHEVRKMTLDRSEYTS-LI--PN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS---- 467 (791)
T ss_dssp EEEEE-CBSSEEEECTTSCCCEE-EE--CS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC----
T ss_pred ccccc-cccceeEeeccCCccee-ee--cC-CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe----
Confidence 44444 34568888887643221 11 11 22477899988555555 445567888888875321 11110
Q ss_pred ccceeeeecCCCCccccEEEEEEeCCCCEEE-EeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCC
Q 015438 213 HDGLDFSAADDGGYSFGIFSLKFSTDGRELV-AGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDD 291 (407)
Q Consensus 213 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d 291 (407)
........|++.+.++.|+ +-...+.|.+.++........+.........|++.|..+.++++-...
T Consensus 468 ------------~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~ 535 (791)
T 3m0c_C 468 ------------RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT 535 (791)
T ss_dssp ------------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS
T ss_pred ------------cCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCC
Confidence 0111356788988775554 445678999999986554333333445688999985556655554333
Q ss_pred -CcEEEEeCcccCCCCceeeee-ccccCCeEEEEecCCCCEEEEE-eCCCcEEEEECCCC
Q 015438 292 -NLCKVWDRRCLNVKGKPAGVL-MGHLEGITFIDSRGDGRYLISN-GKDQAIKLWDIRKM 348 (407)
Q Consensus 292 -~~i~vwd~~~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~s~-~~dg~i~iwd~~~~ 348 (407)
+.|.+.++. +.....+ .........|++++.+..|+.+ ...+.|...++...
T Consensus 536 ~~~I~~~~~d-----G~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 536 PAKIKKGGLN-----GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp SCEEEEEETT-----SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCeEEEEecC-----CCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 688888885 3333333 3333568899999766666555 45678999998654
No 296
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.68 E-value=0.0003 Score=69.20 Aligned_cols=178 Identities=10% Similarity=-0.014 Sum_probs=102.5
Q ss_pred CCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEe-CCCeEEEEECCCC----ceeccccccccccceeee
Q 015438 145 ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS-MSPIVHIVDVGSG----TMESLANVTEIHDGLDFS 219 (407)
Q Consensus 145 dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~dg~i~vwd~~~~----~~~~~~~~~~~~~~~~~~ 219 (407)
...|+..++.+......... ...+..++|.+.+..|+.+. ..+.|+.+++... ....+...
T Consensus 385 ~~~I~~id~~~~~~~~~~~~----~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~---------- 450 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN----LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR---------- 450 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC----CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCS----------
T ss_pred ccceEEEeCCCCcceeeecc----CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeC----------
Confidence 45788888876533221111 12366789998776666654 5578999988751 11111100
Q ss_pred ecCCCCccccEEEEEEeCCCC-EEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEeCC-CcEEEE
Q 015438 220 AADDGGYSFGIFSLKFSTDGR-ELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDD-NLCKVW 297 (407)
Q Consensus 220 ~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d-~~i~vw 297 (407)
.......|++.+.+. ++++-...+.|.++++........+.........|++.|..+.++++-... +.|.++
T Consensus 451 ------~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~ 524 (699)
T 1n7d_A 451 ------DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 524 (699)
T ss_dssp ------CC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBC
T ss_pred ------CCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEE
Confidence 001234577775444 444445567899999876544333332334567889975566665554333 688888
Q ss_pred eCcccCCCCceeeee-ccccCCeEEEEecCCCCEE-EEEeCCCcEEEEECCC
Q 015438 298 DRRCLNVKGKPAGVL-MGHLEGITFIDSRGDGRYL-ISNGKDQAIKLWDIRK 347 (407)
Q Consensus 298 d~~~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l-~s~~~dg~i~iwd~~~ 347 (407)
++. +.....+ .........|+|+|++..| ++-+..+.|..+|+..
T Consensus 525 ~~d-----G~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 525 GLN-----GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp CSS-----SCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred eCC-----CCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 774 2222222 1223456789999875544 5555678899999874
No 297
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.65 E-value=0.0031 Score=60.63 Aligned_cols=200 Identities=13% Similarity=0.112 Sum_probs=119.4
Q ss_pred CCEEEEEeC-CCeEEEEEc-CCCeEEeEeeeccccc--------eEEEEEEECCCCCe----EEEEeCCCeEEEEECCCC
Q 015438 136 GSLFVAGFQ-ASQIRIYDV-ERGWKIQKDILAKSLR--------WTVTDTSLSPDQRH----LVYASMSPIVHIVDVGSG 201 (407)
Q Consensus 136 ~~~l~~~~~-dg~i~iwd~-~~~~~~~~~~~~~~~~--------~~v~~~~~sp~~~~----l~~~~~dg~i~vwd~~~~ 201 (407)
+..+++++. ++.|.-+|. .+|+.+.......... .....++++|.+.. |++++.|+.|.-+|..++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 455666666 789999999 8887776643322110 00122445444444 888889999999999999
Q ss_pred ceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEee------CCCeEEEEEcCCCeeeeeeeccCCC----
Q 015438 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS------SDDCIYVYDLEANKLSLRILAHTSD---- 271 (407)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~---- 271 (407)
+..-........... .-...++ .. ++ .+++++ .++.|+-+|.++++.+-.+......
T Consensus 142 ~~~W~~~~~~~~~~~-------~~~ssP~----v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~ 208 (599)
T 1w6s_A 142 ETVWKVENSDIKVGS-------TLTIAPY----VV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLL 208 (599)
T ss_dssp CEEEEEECCCGGGTC-------BCCSCCE----EE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHT
T ss_pred CEEEeecCCCCCccc-------eeecCCE----EE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccc
Confidence 875433221100000 0000011 11 34 555555 3799999999999987655422111
Q ss_pred ---------------------------------e-EEEEecCCCCCEEEEEeCC----------------CcEEEEeCcc
Q 015438 272 ---------------------------------V-NTVCFGDESGHLIYSGSDD----------------NLCKVWDRRC 301 (407)
Q Consensus 272 ---------------------------------v-~~i~~s~~~~~~l~s~~~d----------------~~i~vwd~~~ 301 (407)
+ ..+++. +...+++.++.+ +.|.-+|.+
T Consensus 209 ~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d-~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~- 286 (599)
T 1w6s_A 209 LASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYD-PGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDAD- 286 (599)
T ss_dssp BCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEE-TTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETT-
T ss_pred cccccccccccccccccccccCCCcceecCCCccccceeEe-CCCCEEEEeCCCCccccCcccCCCccccceEEEEeCC-
Confidence 0 123443 455567776654 378889988
Q ss_pred cCCCCceeeeecc--cc--------CCeEEEEec-CCC---CEEEEEeCCCcEEEEECCCCCCcccc
Q 015438 302 LNVKGKPAGVLMG--HL--------EGITFIDSR-GDG---RYLISNGKDQAIKLWDIRKMSSNASC 354 (407)
Q Consensus 302 ~~~~~~~~~~~~~--~~--------~~i~~~~~s-~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~ 354 (407)
+++.+-.++. |. .++. +... .+| ..++.++.+|.+.++|.++++.+...
T Consensus 287 ---TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 349 (599)
T 1w6s_A 287 ---TGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSAN 349 (599)
T ss_dssp ---TCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ---CCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecc
Confidence 7777665543 21 1221 2222 567 56778899999999999998876543
No 298
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.65 E-value=0.028 Score=54.46 Aligned_cols=201 Identities=7% Similarity=-0.033 Sum_probs=123.4
Q ss_pred CceEEEEECCCCCEEEEE-eCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEE-EeCCCeEEEEECCCCc
Q 015438 125 SRAYVSQFSADGSLFVAG-FQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVY-ASMSPIVHIVDVGSGT 202 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~dg~i~vwd~~~~~ 202 (407)
..+.+++|++.+..|+.+ ..++.|..++++.... ..... .+ ......+++.+.+..|.. -...+.|.+.++....
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~-~~v~~-~g-~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~ 113 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSAL-EHVVE-FG-LDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH 113 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEC-SS-CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc-EEEEe-CC-CCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc
Confidence 457899999976665544 4578899999875422 22111 11 123567888776555544 4556789999987543
Q ss_pred eeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEee--CCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCC
Q 015438 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS--SDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDE 280 (407)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~ 280 (407)
...+.. . .-.....|+++|....|+... ..+.|...++...... .+...-.....|++.+.
T Consensus 114 ~~~l~~-~---------------~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~-~l~~~~~~P~GlalD~~ 176 (628)
T 4a0p_A 114 RQVLVW-K---------------DLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT-TLVPNVGRANGLTIDYA 176 (628)
T ss_dssp CEEEEC-S---------------SCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EEECSCSSEEEEEEETT
T ss_pred EEEEEe-C---------------CCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE-EEECCCCCcceEEEccc
Confidence 222211 0 111467899999655666554 2578888888754433 33234456789999744
Q ss_pred CCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCc
Q 015438 281 SGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSN 351 (407)
Q Consensus 281 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 351 (407)
.+.+.++-...+.|..+|+. ... ...+........++++.. +..+++-...+.|...|..+++..
T Consensus 177 ~~~LY~aD~~~~~I~~~d~d----G~~-~~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~ 241 (628)
T 4a0p_A 177 KRRLYWTDLDTNLIESSNML----GLN-REVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNR 241 (628)
T ss_dssp TTEEEEEETTTTEEEEEETT----SCS-CEEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSC
T ss_pred cCEEEEEECCCCEEEEEcCC----CCc-eEEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCce
Confidence 55555555667899999986 222 223333334456788764 455555556788999987766543
No 299
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.58 E-value=0.013 Score=52.14 Aligned_cols=201 Identities=10% Similarity=0.053 Sum_probs=111.5
Q ss_pred ceEEEEECCCCCEEEEEe------------CCCeEEEEEcCCC-eEEeEeeec----cccceEEEEEEECC--CCC-eEE
Q 015438 126 RAYVSQFSADGSLFVAGF------------QASQIRIYDVERG-WKIQKDILA----KSLRWTVTDTSLSP--DQR-HLV 185 (407)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~------------~dg~i~iwd~~~~-~~~~~~~~~----~~~~~~v~~~~~sp--~~~-~l~ 185 (407)
..-.+...|+|..+++++ .+|.|.++|+.+. .....+... .........+.+.+ ++. +|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 344566788876555541 6899999998742 112222111 11223466666655 343 344
Q ss_pred EE-eC--CCeEEEEECCCCce-eccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEee---------------
Q 015438 186 YA-SM--SPIVHIVDVGSGTM-ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS--------------- 246 (407)
Q Consensus 186 ~~-~~--dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--------------- 246 (407)
++ .. +..|.+|++..... ....... . +..-...+++.+.++|.+.++..
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~---~---------g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~ 198 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTI---R---------HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHL 198 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEE---C---------CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEecc---c---------cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhc
Confidence 43 22 46788877764321 1111100 0 01122578999999998666643
Q ss_pred --CCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEE-EeCCCcEEEEeCcccCCCCce--eeeeccccCCeEE
Q 015438 247 --SDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYS-GSDDNLCKVWDRRCLNVKGKP--AGVLMGHLEGITF 321 (407)
Q Consensus 247 --~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s-~~~d~~i~vwd~~~~~~~~~~--~~~~~~~~~~i~~ 321 (407)
..|.|+.+|.. +. ..+...-...+.|+|+ ++++.|+. -+..+.|..|++.. .+.. ...+ ......-.
T Consensus 199 ~~~~g~vyr~d~~--~~-~~~~~~l~~pNGia~s-pDg~~lYvadt~~~~I~~~~~~~---~g~l~~~~~~-~~~g~PDG 270 (355)
T 3sre_A 199 GLAWSFVTYYSPN--DV-RVVAEGFDFANGINIS-PDGKYVYIAELLAHKIHVYEKHA---NWTLTPLRVL-SFDTLVDN 270 (355)
T ss_dssp TCCCEEEEEECTT--CC-EEEEEEESSEEEEEEC-TTSSEEEEEEGGGTEEEEEEECT---TSCEEEEEEE-ECSSEEEE
T ss_pred cCCccEEEEEECC--eE-EEeecCCcccCcceEC-CCCCEEEEEeCCCCeEEEEEECC---CCcEecCEEE-eCCCCCce
Confidence 12556666653 32 2232334567899998 67765555 45678999999862 2221 2223 22455678
Q ss_pred EEecC-CCCEEEEEeCC-CcEEEEECC
Q 015438 322 IDSRG-DGRYLISNGKD-QAIKLWDIR 346 (407)
Q Consensus 322 ~~~s~-~~~~l~s~~~d-g~i~iwd~~ 346 (407)
+++++ +|++.+++..+ +.|..|+-.
T Consensus 271 i~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 271 ISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred EEEeCCCCcEEEEecCCceEEEEECCC
Confidence 89999 59988877644 345555543
No 300
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.48 E-value=0.06 Score=52.15 Aligned_cols=188 Identities=9% Similarity=0.054 Sum_probs=116.2
Q ss_pred CEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEE-eCCCeEEEEECCCCceeccccccccccc
Q 015438 137 SLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVDVGSGTMESLANVTEIHDG 215 (407)
Q Consensus 137 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 215 (407)
.+|+.+ ....|+..++++..... .....+ -..+..++|++.+..|..+ ..++.|..+++.......+....
T Consensus 7 ~~Ll~s-~~~~I~~i~l~~~~~~~-~~~~~~-~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g----- 78 (628)
T 4a0p_A 7 AFLLFS-RRADIRRISLETNNNNV-AIPLTG-VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFG----- 78 (628)
T ss_dssp CEEEEE-ETTEEEEEESSCTTCEE-ECCCCS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS-----
T ss_pred cEEEEE-eCCcEEEEECCCCCcce-EEEcCC-CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCC-----
Confidence 345554 45789999998653221 111212 2247889999976666654 46788999988755432222110
Q ss_pred eeeeecCCCCccccEEEEEEeCCCCEE-EEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEEEEEe-CCCc
Q 015438 216 LDFSAADDGGYSFGIFSLKFSTDGREL-VAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGS-DDNL 293 (407)
Q Consensus 216 ~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~-~d~~ 293 (407)
......+++.+.+..| ++-...+.|.+.++........+...-.....|++.|..+.++++-. ..+.
T Consensus 79 -----------~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~ 147 (628)
T 4a0p_A 79 -----------LDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPK 147 (628)
T ss_dssp -----------CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCE
T ss_pred -----------CCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCE
Confidence 0135578888765555 44455688999998755432222233455789999865666555542 2567
Q ss_pred EEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEE-eCCCcEEEEECCCC
Q 015438 294 CKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISN-GKDQAIKLWDIRKM 348 (407)
Q Consensus 294 i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~-~~dg~i~iwd~~~~ 348 (407)
|...++. +.....+.........|++++++..|..+ ...+.|...|+...
T Consensus 148 I~r~~~d-----G~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 148 IDRAAMD-----GSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGL 198 (628)
T ss_dssp EEEEETT-----SCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEEeCC-----CCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCC
Confidence 8888774 33333333344567899999976666555 45778999998764
No 301
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.45 E-value=0.033 Score=49.73 Aligned_cols=244 Identities=10% Similarity=0.013 Sum_probs=121.2
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEee----eccccceEEEEEEECCC---CCeEEEE-eC-------C
Q 015438 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDI----LAKSLRWTVTDTSLSPD---QRHLVYA-SM-------S 190 (407)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~~~~~~v~~~~~sp~---~~~l~~~-~~-------d 190 (407)
....++|.|+|+.|+++...|.|++++.+ +....... ...........++|+|+ +..|.++ +. .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 46799999999934445577999999854 32111111 01112234688999996 4444443 22 2
Q ss_pred CeEEEEECCCCc--eeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC-------------CCeEEEEE
Q 015438 191 PIVHIVDVGSGT--MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-------------DDCIYVYD 255 (407)
Q Consensus 191 g~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-------------dg~i~i~d 255 (407)
..|..+++.... ......+. .. +.......|. -..|.|.|+|.+.++.+. .|.|.-+|
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~---~~--~p~~~~~~h~--~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~ 170 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVF---RQ--MPKLSTGNHF--GGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLT 170 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEE---EC--SSCCBSSSCC--CCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEE
T ss_pred eEEEEEEECCCCCCCCceEEEE---EE--CCCCCCCccc--CccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEEC
Confidence 356666665331 11100000 00 0000011232 346999999964444322 25677777
Q ss_pred cCCCe------------eeeeeeccCCCeEEEEecCCCCCEEEEEeC-CCcEEEEeCcccC-------------------
Q 015438 256 LEANK------------LSLRILAHTSDVNTVCFGDESGHLIYSGSD-DNLCKVWDRRCLN------------------- 303 (407)
Q Consensus 256 ~~~~~------------~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~-d~~i~vwd~~~~~------------------- 303 (407)
....- ....+...-.....++|.|.++.++++-.. ++.=.|.-+....
T Consensus 171 ~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~ 250 (353)
T 2g8s_A 171 DQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIP 250 (353)
T ss_dssp TTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCT
T ss_pred CCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccC
Confidence 65320 111121122346789998546766655332 1111222111000
Q ss_pred --------CCCceeeeeccccCCeEEEEecC-------CCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccceee
Q 015438 304 --------VKGKPAGVLMGHLEGITFIDSRG-------DGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWM 368 (407)
Q Consensus 304 --------~~~~~~~~~~~~~~~i~~~~~s~-------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 368 (407)
....++..+. +...+..+.|.. +|.++++.-..+.|...++...+....... .......+..+
T Consensus 251 ~~~~~~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~rp~~v 328 (353)
T 2g8s_A 251 EAKGEIVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRI-LTDRGQRIRDV 328 (353)
T ss_dssp TCCBSSCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEE-SGGGCCCEEEE
T ss_pred cccCCCCCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEc-ccCCCCceeEE
Confidence 0011222333 234577888864 477777776788888888875432111100 11222356778
Q ss_pred eCCCCCCccCC
Q 015438 369 DYPPQARDLKH 379 (407)
Q Consensus 369 ~~~~~~~~l~~ 379 (407)
.+.|+|.++.+
T Consensus 329 ~~~pdG~lyv~ 339 (353)
T 2g8s_A 329 RTGPDGYLYVL 339 (353)
T ss_dssp EECTTSCEEEE
T ss_pred EECCCCcEEEE
Confidence 88888876654
No 302
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.44 E-value=0.049 Score=47.28 Aligned_cols=206 Identities=10% Similarity=0.078 Sum_probs=126.7
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCc-eeccc
Q 015438 129 VSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGT-MESLA 207 (407)
Q Consensus 129 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~-~~~~~ 207 (407)
+.-.+|..+.+|.-. ...+.|+|+++..++....... .|.--.|-.+. .|+..+ +..|+-|+++... +...+
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e----~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P~kvF 143 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD----DVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMF 143 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS----CEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCCEEEE
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCC----ccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCCceee
Confidence 334688888777665 6889999999987776544433 48778886544 444443 3679999997532 22222
Q ss_pred cccccccceeeeecCCCCccccEEEEEEeCCCCEEEEee-------CCCeEEEEEcCCCeeeeeeeccCCCeEEEEec--
Q 015438 208 NVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-------SDDCIYVYDLEANKLSLRILAHTSDVNTVCFG-- 278 (407)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-------~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s-- 278 (407)
.... .+ ....|..-..+++.++++..+ -.|.+.+|..+.+ ....+.+|.+....+...
T Consensus 144 dR~~---~L---------~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~ 210 (365)
T 2xzh_A 144 DRHS---SL---------AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGN 210 (365)
T ss_dssp ECCG---GG---------TTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTC
T ss_pred ecch---hc---------ccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEecCCC
Confidence 1111 00 123677778888888765543 2367899998754 345666776555444442
Q ss_pred CCCCCEEEEEeC---CCcEEEEeCcccC-CC----Cceeeeecc---ccCCeEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 015438 279 DESGHLIYSGSD---DNLCKVWDRRCLN-VK----GKPAGVLMG---HLEGITFIDSRGDGRYLISNGKDQAIKLWDIRK 347 (407)
Q Consensus 279 ~~~~~~l~s~~~---d~~i~vwd~~~~~-~~----~~~~~~~~~---~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 347 (407)
+...++|+.+.. .++++|.++.... .. .+.+..+.. ...-.-++..++.-..+..-+.-|.|.+||+.+
T Consensus 211 ~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleT 290 (365)
T 2xzh_A 211 AEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLET 290 (365)
T ss_dssp SSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTT
T ss_pred CCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEccc
Confidence 111224444433 2589999985321 00 111111211 133456788888888899999999999999999
Q ss_pred CCCcccc
Q 015438 348 MSSNASC 354 (407)
Q Consensus 348 ~~~~~~~ 354 (407)
+.++..-
T Consensus 291 gt~i~~n 297 (365)
T 2xzh_A 291 GTCIYMN 297 (365)
T ss_dssp CCEEEEE
T ss_pred CcEEEEe
Confidence 9887643
No 303
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.42 E-value=0.024 Score=49.97 Aligned_cols=188 Identities=12% Similarity=0.158 Sum_probs=111.1
Q ss_pred CCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeC----CCCE--EEEee--C--CCe
Q 015438 181 QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST----DGRE--LVAGS--S--DDC 250 (407)
Q Consensus 181 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~----~~~~--l~~~~--~--dg~ 250 (407)
..+++.....+-+.+||+ +++........ .++.+..-| .|+. ++.++ . +++
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~g------------------~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~ 100 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNTG------------------KLNNVDIRYDFPLNGKKVDIAAASNRSEGKNT 100 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECCS------------------CEEEEEEEEEEEETTEEEEEEEEEECSTTCCE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccCC------------------CcccEEEecccccCCceEeEEEEeCCCCCCCe
Confidence 445666667788999999 56554443211 334444433 2322 33333 3 578
Q ss_pred EEEEEc--CCCeeeeeeec------cC-CCeEEEEe--cCCCCC-EEEEEeCCCcEEEEeCccc---CCCCceeeeeccc
Q 015438 251 IYVYDL--EANKLSLRILA------HT-SDVNTVCF--GDESGH-LIYSGSDDNLCKVWDRRCL---NVKGKPAGVLMGH 315 (407)
Q Consensus 251 i~i~d~--~~~~~~~~~~~------~~-~~v~~i~~--s~~~~~-~l~s~~~d~~i~vwd~~~~---~~~~~~~~~~~~~ 315 (407)
|.+|++ .+++ +..+.. .. ..+..+|+ +|..+. ++++...+|.+..|++... ....+.+..+.-
T Consensus 101 l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l- 178 (355)
T 3amr_A 101 IEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM- 178 (355)
T ss_dssp EEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-
T ss_pred EEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-
Confidence 999977 3333 444411 11 45666777 655565 6777888899999998421 124455666653
Q ss_pred cCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCC-----CcccccCCCccccccceeeeC--CCCCC--ccCCC-CCcce
Q 015438 316 LEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMS-----SNASCNLGFRSYEWDYRWMDY--PPQAR--DLKHP-CDQSV 385 (407)
Q Consensus 316 ~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~~~v~~~~~--~~~~~--~l~~~-~~~~v 385 (407)
.+.+-.|...+....|+.+-++..|..++.+... .+... .......++..|+. .++++ ++++. .++..
T Consensus 179 gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~--~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~ 256 (355)
T 3amr_A 179 NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRA--DGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSY 256 (355)
T ss_dssp SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEB--SSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEE
T ss_pred CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEe--cCCccccCcceEEEEecCCCCEEEEEEcCCCCEE
Confidence 4578899999988999999998776666654222 21111 12333345666665 44443 55444 45688
Q ss_pred EEEeCC
Q 015438 386 ATYKGH 391 (407)
Q Consensus 386 ~~~~gh 391 (407)
.+|+-.
T Consensus 257 ~Vydr~ 262 (355)
T 3amr_A 257 AIYDRQ 262 (355)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 889765
No 304
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.39 E-value=0.01 Score=55.22 Aligned_cols=160 Identities=14% Similarity=0.120 Sum_probs=98.2
Q ss_pred EEEEEECC-CCCeEEEEe-CCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEE-------eCCCCEE
Q 015438 172 VTDTSLSP-DQRHLVYAS-MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKF-------STDGREL 242 (407)
Q Consensus 172 v~~~~~sp-~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------s~~~~~l 242 (407)
...|+|+| ++..|.++. ..+.|++.|+..+....+..... ........++| +++++.|
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~-------------~~~~~p~~ia~~~~~~~~d~~G~~l 207 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINT-------------IPTNRIRSIAFNKKIEGYADEAEYM 207 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTT-------------SSCSBEEEEEECCCBTTTBCTTCEE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCc-------------cccCCCcEEEEeecccccCCCCCEE
Confidence 56789998 355455544 44678899988876654433211 01125788999 9999966
Q ss_pred EEeeCCC-------eEEEEEcCC-Ceee-----eeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCc-------cc
Q 015438 243 VAGSSDD-------CIYVYDLEA-NKLS-----LRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRR-------CL 302 (407)
Q Consensus 243 ~~~~~dg-------~i~i~d~~~-~~~~-----~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~-------~~ 302 (407)
+++...+ .|.+++... +... ..+... .....++++|.++.++++-..++.|..+|+. ..
T Consensus 208 yvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg 286 (496)
T 3kya_A 208 IVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNG 286 (496)
T ss_dssp EEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTT
T ss_pred EEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCc
Confidence 6665543 377776443 2221 122222 2345778886678888888888999999986 11
Q ss_pred CC------C----CceeeeeccccCCeEEEEecCCCCEEE-EEeCCCcEEEEECC
Q 015438 303 NV------K----GKPAGVLMGHLEGITFIDSRGDGRYLI-SNGKDQAIKLWDIR 346 (407)
Q Consensus 303 ~~------~----~~~~~~~~~~~~~i~~~~~s~~~~~l~-s~~~dg~i~iwd~~ 346 (407)
.. . .+.+... +.......|+|+|+|++|. +-+....|+.++..
T Consensus 287 ~~~tp~~~~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 287 GSWDPIVKNNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp CCCCCBGGGCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred eeecccccccccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 11 0 0011112 2234568999999999644 44567889997654
No 305
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.36 E-value=0.022 Score=51.40 Aligned_cols=160 Identities=17% Similarity=0.175 Sum_probs=95.5
Q ss_pred CCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccc--cceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCceeccc-cc
Q 015438 133 SADGSLFVAGFQASQIRIYDVERGWKIQKDILAKS--LRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLA-NV 209 (407)
Q Consensus 133 s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~ 209 (407)
..+|..++.+ .++.||.-++..+.. .+...... .-..|..+..+|+|++||..+. ..|.|..+..+...... ..
T Consensus 29 ~~n~t~i~~a-~~n~iR~~~i~~~~~-Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~ 105 (452)
T 3pbp_A 29 SQNGTRIVFI-QDNIIRWYNVLTDSL-YHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSI 105 (452)
T ss_dssp ETTTTEEEEE-ETTEEEEEETTTCSS-CEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHH
T ss_pred EcCCCEEEEE-ECCEEEEEECCCCCc-ceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCccccc
Confidence 3456666666 457888888764322 22222221 1113677999999999999865 57999988743211110 00
Q ss_pred cccccceeeeecCCC-CccccEEEEEEeCC---CCEEEEeeCCCeEEEEEcCCC--eeeeee---------eccCCCeEE
Q 015438 210 TEIHDGLDFSAADDG-GYSFGIFSLKFSTD---GRELVAGSSDDCIYVYDLEAN--KLSLRI---------LAHTSDVNT 274 (407)
Q Consensus 210 ~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~---~~~l~~~~~dg~i~i~d~~~~--~~~~~~---------~~~~~~v~~ 274 (407)
........+...+.. ....+|..+.|+|- +..|++-..|+.|++||+... ++. .+ ......|.+
T Consensus 106 ~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S 184 (452)
T 3pbp_A 106 QDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITD 184 (452)
T ss_dssp HHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEE
T ss_pred ccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEE
Confidence 000111112221111 12457999999994 458999999999999999852 122 12 122367899
Q ss_pred EEecCCCCCEEEEEe--CCCcEEEE
Q 015438 275 VCFGDESGHLIYSGS--DDNLCKVW 297 (407)
Q Consensus 275 i~~s~~~~~~l~s~~--~d~~i~vw 297 (407)
++|. .++-.|...+ ..|.|+-.
T Consensus 185 ~~Fg-~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 185 LEFS-KDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEC-TTSSCEEEEECTTSCEEEEE
T ss_pred EEEc-CCCcEEEEEecCCCCCEEEE
Confidence 9997 5776666655 67777653
No 306
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.36 E-value=0.07 Score=47.24 Aligned_cols=246 Identities=11% Similarity=0.019 Sum_probs=124.4
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEee---eccccceEEEEEEECCC---CCeEEEE---eCCCeEEE
Q 015438 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDI---LAKSLRWTVTDTSLSPD---QRHLVYA---SMSPIVHI 195 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---~~~~~~~~v~~~~~sp~---~~~l~~~---~~dg~i~v 195 (407)
...+.++|.|+|+++++--..|.|++++..++....... ...........|+++|+ +..|.+. ..++.|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 456899999999977776548999999876553321111 11122345889999995 3444432 23456666
Q ss_pred EECCCCcee--ccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC-------------CCeEEEEEcCCCe
Q 015438 196 VDVGSGTME--SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-------------DDCIYVYDLEANK 260 (407)
Q Consensus 196 wd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-------------dg~i~i~d~~~~~ 260 (407)
|.+..+... ........... ......| .-..|.|.|||.+.++.+. .|.|.-++....-
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~----~p~~~~H--~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~i 185 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRG----IPKGVIH--NGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEP 185 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEE----ECCCSSC--CCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSB
T ss_pred EEeCCCCcccccCCCcEEEEEc----CCCCCCc--cCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCc
Confidence 666542210 00000000000 0011223 3456999999986666432 3556666654320
Q ss_pred -------eeeee-eccCCCeEEEEecCCCCCEEEEEe-CCCcEEEEeCcccC--------------CCCceeeeeccccC
Q 015438 261 -------LSLRI-LAHTSDVNTVCFGDESGHLIYSGS-DDNLCKVWDRRCLN--------------VKGKPAGVLMGHLE 317 (407)
Q Consensus 261 -------~~~~~-~~~~~~v~~i~~s~~~~~~l~s~~-~d~~i~vwd~~~~~--------------~~~~~~~~~~~~~~ 317 (407)
....+ .+|. ....++|+ +++.++++-. .|+.-.|--+.... ....++..+..+..
T Consensus 186 p~~nPf~~~~i~a~G~R-Np~Gla~d-p~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ 263 (347)
T 3das_A 186 APGNPFPGSPVYSYGHR-NVQGLAWD-DKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEA 263 (347)
T ss_dssp CTTCSSTTCCEEEBCCS-BCCEEEEC-TTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTC
T ss_pred cCCCCCCCCeEEeeCCC-CcceEEEC-CCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCC
Confidence 00111 1343 35689998 4777665542 23222222221000 01123333333334
Q ss_pred CeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccCC
Q 015438 318 GITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKH 379 (407)
Q Consensus 318 ~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 379 (407)
....++|. +|..++..-..+.|....+...........-.......++.+...|+|.++..
T Consensus 264 ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~ 324 (347)
T 3das_A 264 SPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLV 324 (347)
T ss_dssp CEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEE
T ss_pred CCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEE
Confidence 56778886 46666655566677777776543211100001122345677777887766554
No 307
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.34 E-value=0.0089 Score=52.00 Aligned_cols=188 Identities=15% Similarity=0.095 Sum_probs=97.7
Q ss_pred CCCEEEEEeCC-----CeEEEEEcCCCe---EEeEeeeccccceEEEEEEECCCCCeEEEEeCC-----CeEEEEECCCC
Q 015438 135 DGSLFVAGFQA-----SQIRIYDVERGW---KIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-----PIVHIVDVGSG 201 (407)
Q Consensus 135 ~~~~l~~~~~d-----g~i~iwd~~~~~---~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----g~i~vwd~~~~ 201 (407)
++..++.|+.+ ..+.+||+.+.. -... ............+.+ +++.++.|+.+ ..+.+||..+.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~-~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSV-APMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNID 138 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEE-CCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEEC-CCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCC
Confidence 56777777754 468999988763 2111 111111111222222 67777777654 36889998877
Q ss_pred ceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCC-----CeEEEEEcCCCeeeee--eeccCCCeEE
Q 015438 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-----DCIYVYDLEANKLSLR--ILAHTSDVNT 274 (407)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~--~~~~~~~v~~ 274 (407)
+.......... ..+| ..+.+ ++++++.|+.+ ..+.+||+.+.+-... +....... +
T Consensus 139 ~W~~~~~~p~~----------r~~~----~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~ 201 (301)
T 2vpj_A 139 QWSMLGDMQTA----------REGA----GLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGA-G 201 (301)
T ss_dssp EEEEEEECSSC----------CBSC----EEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSC-E
T ss_pred eEEECCCCCCC----------cccc----eEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccc-e
Confidence 65443221110 0011 11222 67777777654 4589999987754322 21111112 2
Q ss_pred EEecCCCCCEEEEEeCC-----CcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCC-----CcEEEEE
Q 015438 275 VCFGDESGHLIYSGSDD-----NLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKD-----QAIKLWD 344 (407)
Q Consensus 275 i~~s~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~d-----g~i~iwd 344 (407)
++. .++.+++.|+.+ ..+.+||+... .-..+..+.........+.+ +++.++.|+.+ ..|.+||
T Consensus 202 ~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd 275 (301)
T 2vpj_A 202 VAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTD--SWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYD 275 (301)
T ss_dssp EEE--ETTEEEEECCBCSSSBCCCEEEEETTTT--EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEE
T ss_pred EEE--ECCEEEEEeCCCCCcccceEEEEeCCCC--cEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEc
Confidence 233 246777777754 46889998621 11111111111112223333 67777777765 3577888
Q ss_pred CCCC
Q 015438 345 IRKM 348 (407)
Q Consensus 345 ~~~~ 348 (407)
+.+.
T Consensus 276 ~~~~ 279 (301)
T 2vpj_A 276 PIID 279 (301)
T ss_dssp TTTT
T ss_pred CCCC
Confidence 7653
No 308
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.34 E-value=0.012 Score=51.39 Aligned_cols=188 Identities=11% Similarity=0.108 Sum_probs=99.1
Q ss_pred CCCEEEEEeCC----CeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCC------CeEEEEECCCCcee
Q 015438 135 DGSLFVAGFQA----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS------PIVHIVDVGSGTME 204 (407)
Q Consensus 135 ~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d------g~i~vwd~~~~~~~ 204 (407)
++..++.|+.+ ..+.+||+.+..-... ............+.+ ++++++.|+.+ ..+.+||..+.+..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSK-LGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEE-ECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEEC-CCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceE
Confidence 56677777754 6789999988633222 111111111222223 67777888765 46889999887654
Q ss_pred ccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC---------CCeEEEEEcCCCeeeee--eeccCCCeE
Q 015438 205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS---------DDCIYVYDLEANKLSLR--ILAHTSDVN 273 (407)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~--~~~~~~~v~ 273 (407)
........ ...| ..+.+ ++++++.|+. -..+.+||+.+.+-... +...... .
T Consensus 132 ~~~~~p~~----------r~~~----~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~ 194 (306)
T 3ii7_A 132 TKPSMLTQ----------RCSH----GMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKN-H 194 (306)
T ss_dssp EECCCSSC----------CBSC----EEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBS-C
T ss_pred eCCCCcCC----------ccee----EEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhc-c
Confidence 43221110 0111 11222 5666677653 34589999987753222 2111111 2
Q ss_pred EEEecCCCCCEEEEEeCC-----CcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCC-----CcEEEE
Q 015438 274 TVCFGDESGHLIYSGSDD-----NLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKD-----QAIKLW 343 (407)
Q Consensus 274 ~i~~s~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~d-----g~i~iw 343 (407)
+++. .++.+++.|+.+ ..+.+||+... .-..+..+.........+.+ +++.++.|+.+ ..+.+|
T Consensus 195 ~~~~--~~~~i~v~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~y 268 (306)
T 3ii7_A 195 GLVF--VKDKIFAVGGQNGLGGLDNVEYYDIKLN--EWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEY 268 (306)
T ss_dssp EEEE--ETTEEEEECCEETTEEBCCEEEEETTTT--EEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEE
T ss_pred eEEE--ECCEEEEEeCCCCCCCCceEEEeeCCCC--cEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEE
Confidence 2333 256677777653 46888998621 11112112111222233334 67788888754 458888
Q ss_pred ECCCC
Q 015438 344 DIRKM 348 (407)
Q Consensus 344 d~~~~ 348 (407)
|+.+.
T Consensus 269 d~~~~ 273 (306)
T 3ii7_A 269 NTETD 273 (306)
T ss_dssp ETTTT
T ss_pred cCCCC
Confidence 88763
No 309
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.34 E-value=0.01 Score=51.74 Aligned_cols=188 Identities=14% Similarity=0.132 Sum_probs=97.3
Q ss_pred CCCEEEEEeCC-----CeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCC-----eEEEEECCCCcee
Q 015438 135 DGSLFVAGFQA-----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP-----IVHIVDVGSGTME 204 (407)
Q Consensus 135 ~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg-----~i~vwd~~~~~~~ 204 (407)
++..++.|+.+ ..+.+||..+..-... ............+.+ +++.++.|+.++ .+.+||+.+.+..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~ 137 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV-ANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWF 137 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEE-CCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeC-CCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEe
Confidence 56777777654 3588999887632222 111111111222222 677778887553 5788998877654
Q ss_pred ccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCC-------CeEEEEEcCCCeeee--eeeccCCCeEEE
Q 015438 205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-------DCIYVYDLEANKLSL--RILAHTSDVNTV 275 (407)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-------g~i~i~d~~~~~~~~--~~~~~~~~v~~i 275 (407)
........ .. ....+.+ ++++++.|+.+ ..+.+||+.+.+-.. .+...... .++
T Consensus 138 ~~~~~p~~----------r~----~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~ 200 (302)
T 2xn4_A 138 HVAPMNTR----------RS----SVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSG-AGV 200 (302)
T ss_dssp EECCCSSC----------CB----SCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBS-CEE
T ss_pred ecCCCCCc----------cc----CceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccccc-ccE
Confidence 43322110 00 1112222 56677776542 358999998765322 22111111 223
Q ss_pred EecCCCCCEEEEEeCC-----CcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCC-----cEEEEEC
Q 015438 276 CFGDESGHLIYSGSDD-----NLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQ-----AIKLWDI 345 (407)
Q Consensus 276 ~~s~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg-----~i~iwd~ 345 (407)
+. .++.+++.|+.+ ..+.+||+... .-..+..+.........+.+ +++.++.|+.++ .+.+||+
T Consensus 201 ~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 201 GV--LNNLLYAVGGHDGPLVRKSVEVYDPTTN--AWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp EE--ETTEEEEECCBSSSSBCCCEEEEETTTT--EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEET
T ss_pred EE--ECCEEEEECCCCCCcccceEEEEeCCCC--CEeeCCCCCCccccCeEEEE--CCEEEEECCcCCCcccccEEEEcC
Confidence 33 256777787754 36889998621 11111111111111222223 677778887653 4888888
Q ss_pred CCC
Q 015438 346 RKM 348 (407)
Q Consensus 346 ~~~ 348 (407)
.+.
T Consensus 275 ~~~ 277 (302)
T 2xn4_A 275 TTD 277 (302)
T ss_dssp TTT
T ss_pred CCC
Confidence 763
No 310
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.20 E-value=0.032 Score=48.85 Aligned_cols=192 Identities=14% Similarity=0.033 Sum_probs=97.4
Q ss_pred EECCCCCEEEEEeC-----C------CeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCC--------C
Q 015438 131 QFSADGSLFVAGFQ-----A------SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS--------P 191 (407)
Q Consensus 131 ~~s~~~~~l~~~~~-----d------g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d--------g 191 (407)
....++..++.|+. . ..+.+||..+..-. ..............+.+ +++.++.|+.+ .
T Consensus 41 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~ 117 (315)
T 4asc_A 41 LVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL-GMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLD 117 (315)
T ss_dssp EECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE-ECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCC
T ss_pred EEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEE-ECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccc
Confidence 34457788888873 1 12788898876322 21111111111122222 66777777742 3
Q ss_pred eEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC-C-----CeEEEEEcCCCeeee--
Q 015438 192 IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-D-----DCIYVYDLEANKLSL-- 263 (407)
Q Consensus 192 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d-----g~i~i~d~~~~~~~~-- 263 (407)
.+.+||..+.+.......... ..+| ..+. .++++++.|+. + ..+.+||+.+.+-..
T Consensus 118 ~~~~~d~~~~~W~~~~~~p~~----------r~~~----~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~ 181 (315)
T 4asc_A 118 SVMCYDRLSFKWGESDPLPYV----------VYGH----TVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELA 181 (315)
T ss_dssp CEEEEETTTTEEEECCCCSSC----------CBSC----EEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECC
T ss_pred eEEEECCCCCcEeECCCCCCc----------ccce----eEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECC
Confidence 688999988765443321110 0011 1122 35667777775 2 469999998765322
Q ss_pred eeeccCCCeEEEEecCCCCCEEEEEeCCC-----cEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCC
Q 015438 264 RILAHTSDVNTVCFGDESGHLIYSGSDDN-----LCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQ 338 (407)
Q Consensus 264 ~~~~~~~~v~~i~~s~~~~~~l~s~~~d~-----~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg 338 (407)
.+...... .+++. .++++++.|+.++ .+.+||+... .-..+..+.........+.+ +++.++.|+.++
T Consensus 182 ~~p~~r~~-~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~ 254 (315)
T 4asc_A 182 PMQTARSL-FGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDN--KWAPFEAFPQERSSLSLVSL--VGTLYAIGGFAT 254 (315)
T ss_dssp CCSSCCBS-CEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTT--EEEEECCCSSCCBSCEEEEE--TTEEEEEEEEEE
T ss_pred CCCCchhc-eEEEE--ECCEEEEEeccCCCCccceEEEEECCCC--eEEECCCCCCcccceeEEEE--CCEEEEECCccc
Confidence 22111111 22333 2567788887654 5888888621 11111111111112223333 667777777532
Q ss_pred --------------cEEEEECCCC
Q 015438 339 --------------AIKLWDIRKM 348 (407)
Q Consensus 339 --------------~i~iwd~~~~ 348 (407)
.|.+||+.+.
T Consensus 255 ~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 255 LETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp EECTTSCEEEEEEEEEEEEETTTT
T ss_pred cCcCCccccccccCcEEEecCCCC
Confidence 3677887663
No 311
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.19 E-value=0.14 Score=49.38 Aligned_cols=199 Identities=10% Similarity=0.001 Sum_probs=113.8
Q ss_pred CceEEEEECCCCCEEEEE-eCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEE-EEeCCCeEEEEECCCCc
Q 015438 125 SRAYVSQFSADGSLFVAG-FQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLV-YASMSPIVHIVDVGSGT 202 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~-~~~~dg~i~vwd~~~~~ 202 (407)
..+.+++|.+.+..|+.+ ...+.|+.++++..... ... . ..-.....+++.+.+..|. +-+..+.|.+.++....
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~-~v~-~-~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~ 425 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQ-FVV-T-AQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM 425 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEE-C-SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccE-EEE-E-CCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe
Confidence 356789999865555544 45778999988754221 111 1 1112356788876544444 44567889999887543
Q ss_pred eeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEee--CCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCC
Q 015438 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS--SDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDE 280 (407)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~ 280 (407)
...+.. . .-.....|++.|....|+... ..+.|...++............-...+.|++.+.
T Consensus 426 ~~~l~~-~---------------~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~ 489 (619)
T 3s94_A 426 RKILIS-E---------------DLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYD 489 (619)
T ss_dssp CEEEEC-T---------------TCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETT
T ss_pred EEEEEE-C---------------CCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEccc
Confidence 221110 0 112578899999754555543 2467888887643332222223456788999744
Q ss_pred CCCEEEEEeCCCcEEEEeCcccCCCCceeeee-ccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 015438 281 SGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVL-MGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKM 348 (407)
Q Consensus 281 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 348 (407)
.+++.++-+..+.|..+++. +.....+ ........+++...+ ..+++-...+.|...|..++
T Consensus 490 ~~~LY~aD~~~~~I~~~~~d-----G~~~~~~~~~~l~~P~glav~~~-~ly~tD~~~~~I~~~~k~~g 552 (619)
T 3s94_A 490 EGKIYWGDAKTDKIEVMNTD-----GTGRRVLVEDKIPHIFGFTLLGD-YVYWTDWQRRSIERVHKRSA 552 (619)
T ss_dssp TTEEEEEETTTTEEEEEESS-----SCCCEEEEECCCCSSCCEEEETT-EEEEECTTSSCEEEEESSSC
T ss_pred CCEEEEEECCCCEEEEEecC-----CCceEEEeccCCCCcEEEEEECC-EEEEeecCCCeEEEEEcCCC
Confidence 55555555566789999985 2222222 122222345565433 44444445677888887776
No 312
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.12 E-value=0.028 Score=48.82 Aligned_cols=188 Identities=17% Similarity=0.148 Sum_probs=96.2
Q ss_pred CCCEEEEEe-CC-----CeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCC-----CeEEEEECCCCc-
Q 015438 135 DGSLFVAGF-QA-----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-----PIVHIVDVGSGT- 202 (407)
Q Consensus 135 ~~~~l~~~~-~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----g~i~vwd~~~~~- 202 (407)
++..++.|+ .+ ..+.+||+.+..... .............+. .+++.++.|+.+ ..+.+||..+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSF-LPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADED 90 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEE-CCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEe-CCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCC
Confidence 445666665 22 468999988763222 111111111112222 257777787755 468999998776
Q ss_pred --eeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCC-----CeEEEEEcCCCeeee--eeeccCCCeE
Q 015438 203 --MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-----DCIYVYDLEANKLSL--RILAHTSDVN 273 (407)
Q Consensus 203 --~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~~~--~~~~~~~~v~ 273 (407)
.......... .. .-..+.+ ++++++.|+.+ ..+.+||+.+.+-.. .+...... .
T Consensus 91 ~~W~~~~~~p~~----------r~----~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~ 153 (301)
T 2vpj_A 91 GVWYSVAPMNVR----------RG----LAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREG-A 153 (301)
T ss_dssp CCCEEECCCSSC----------CB----SCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBS-C
T ss_pred CeeEECCCCCCC----------cc----ceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCccc-c
Confidence 4333221110 00 1112222 56777777644 368999998765322 22111111 2
Q ss_pred EEEecCCCCCEEEEEeCC-----CcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCC-----CcEEEE
Q 015438 274 TVCFGDESGHLIYSGSDD-----NLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKD-----QAIKLW 343 (407)
Q Consensus 274 ~i~~s~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~d-----g~i~iw 343 (407)
+++. .++.+++.|+.+ ..+.+||+... .-..+..+.........+.+ +++.++.|+.+ ..+.+|
T Consensus 154 ~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~y 227 (301)
T 2vpj_A 154 GLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTG--HWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAY 227 (301)
T ss_dssp EEEE--ETTEEEEECCBCSSCBCCCEEEEETTTT--EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEE
T ss_pred eEEE--ECCEEEEECCCCCCcccceEEEEeCCCC--cEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEE
Confidence 2333 256677777754 46888998621 11111111111112223333 66777777764 468899
Q ss_pred ECCCC
Q 015438 344 DIRKM 348 (407)
Q Consensus 344 d~~~~ 348 (407)
|+.+.
T Consensus 228 d~~~~ 232 (301)
T 2vpj_A 228 NIRTD 232 (301)
T ss_dssp ETTTT
T ss_pred eCCCC
Confidence 98764
No 313
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.10 E-value=0.15 Score=46.06 Aligned_cols=205 Identities=10% Similarity=0.075 Sum_probs=128.0
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCc-eeccc
Q 015438 129 VSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGT-MESLA 207 (407)
Q Consensus 129 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~-~~~~~ 207 (407)
+.-.+|..+.+|.-. ...+.|+|+++..++....... .|.--.|-.+ +.|+..+ +..|+-|++.... +...+
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e----~VvfWkWis~-~~l~lVT-~taVyHWsi~~~s~P~kvF 142 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD----DVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMF 142 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS----CCCEEEEEET-TEEEEEC-SSEEEEEESSSSCCCEEEE
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC----CceEEEecCC-CeEEEEc-CCeeEEecccCCCCchhhe
Confidence 445678777777664 6899999999987776544333 3666777544 3444443 4679999997532 22222
Q ss_pred cccccccceeeeecCCCCccccEEEEEEeCCCCEEEEee-------CCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCC
Q 015438 208 NVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-------SDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDE 280 (407)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-------~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~ 280 (407)
.... .+ ....|..-..+++.++++..+ -.|.+.+|..+.+ ....+.+|.+....+... .
T Consensus 143 dR~~---~L---------~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~-g 208 (494)
T 1bpo_A 143 DRHS---SL---------AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKME-G 208 (494)
T ss_dssp ECCG---GG---------TTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECT-T
T ss_pred ecch---hc---------ccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecC-C
Confidence 1111 00 123677778888888766433 2467899998744 345677777666555552 2
Q ss_pred C---CCEEEEEeCC---CcEEEEeCcccCC-----CCceeeeecc---ccCCeEEEEecCCCCEEEEEeCCCcEEEEECC
Q 015438 281 S---GHLIYSGSDD---NLCKVWDRRCLNV-----KGKPAGVLMG---HLEGITFIDSRGDGRYLISNGKDQAIKLWDIR 346 (407)
Q Consensus 281 ~---~~~l~s~~~d---~~i~vwd~~~~~~-----~~~~~~~~~~---~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~ 346 (407)
+ .++++.+... +.++|.++..... ..+.+..+.. ...-..++..++.-..+..-+.-|.|.+||+.
T Consensus 209 ~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDle 288 (494)
T 1bpo_A 209 NAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLE 288 (494)
T ss_dssp CSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETT
T ss_pred CCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecc
Confidence 2 2345555443 7899999853210 1111111111 13345678888888889999999999999999
Q ss_pred CCCCcccc
Q 015438 347 KMSSNASC 354 (407)
Q Consensus 347 ~~~~~~~~ 354 (407)
++.++..-
T Consensus 289 Tgt~i~~n 296 (494)
T 1bpo_A 289 TGTCIYMN 296 (494)
T ss_dssp TCCEEEEE
T ss_pred cceeeeee
Confidence 99887643
No 314
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.91 E-value=0.026 Score=49.29 Aligned_cols=188 Identities=14% Similarity=0.106 Sum_probs=96.5
Q ss_pred CCCEEEEEeC----C-----CeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCC-----CeEEEEECCC
Q 015438 135 DGSLFVAGFQ----A-----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-----PIVHIVDVGS 200 (407)
Q Consensus 135 ~~~~l~~~~~----d-----g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----g~i~vwd~~~ 200 (407)
++..++.|+. + ..+.+||+.+..-.. .............+.+ +++.++.|+.+ ..+.+||..+
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 146 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSP-CAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPER 146 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEE-CCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeE-CCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCC
Confidence 5667777665 2 468899988763222 1111111111222223 67777777643 3688899887
Q ss_pred CceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCC-----CeEEEEEcCCCeeee--eeeccCCCeE
Q 015438 201 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-----DCIYVYDLEANKLSL--RILAHTSDVN 273 (407)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~~~--~~~~~~~~v~ 273 (407)
.+.......... ..+| ..+.+ ++++++.|+.+ ..+.+||+.+.+-.. .+.......
T Consensus 147 ~~W~~~~~~p~~----------r~~~----~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~- 209 (308)
T 1zgk_A 147 DEWHLVAPMLTR----------RIGV----GVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGA- 209 (308)
T ss_dssp TEEEECCCCSSC----------CBSC----EEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSC-
T ss_pred CeEeECCCCCcc----------ccce----EEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccc-
Confidence 765443322110 0011 12222 56777777654 458999998765322 121111112
Q ss_pred EEEecCCCCCEEEEEeCC-----CcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCC-----CcEEEE
Q 015438 274 TVCFGDESGHLIYSGSDD-----NLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKD-----QAIKLW 343 (407)
Q Consensus 274 ~i~~s~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~d-----g~i~iw 343 (407)
+++. .++.+++.|+.+ ..+.+||+... .-..+..+.........+.+ +++.++.|+.+ ..+.+|
T Consensus 210 ~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~y 283 (308)
T 1zgk_A 210 GVCV--LHNCIYAAGGYDGQDQLNSVERYDVETE--TWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECY 283 (308)
T ss_dssp EEEE--ETTEEEEECCBCSSSBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEE
T ss_pred eEEE--ECCEEEEEeCCCCCCccceEEEEeCCCC--cEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEE
Confidence 2333 256677777754 56899998622 11111111111112222333 67777777754 347788
Q ss_pred ECCCC
Q 015438 344 DIRKM 348 (407)
Q Consensus 344 d~~~~ 348 (407)
|+.+.
T Consensus 284 d~~~~ 288 (308)
T 1zgk_A 284 DPDTD 288 (308)
T ss_dssp ETTTT
T ss_pred cCCCC
Confidence 87653
No 315
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.90 E-value=0.079 Score=46.36 Aligned_cols=191 Identities=14% Similarity=0.098 Sum_probs=95.3
Q ss_pred EECCCCCEEEEEeC----CC-------eEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCC-------Ce
Q 015438 131 QFSADGSLFVAGFQ----AS-------QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-------PI 192 (407)
Q Consensus 131 ~~s~~~~~l~~~~~----dg-------~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-------g~ 192 (407)
....++..++.|+. ++ .+.+||..+..-.. .............+.+ +++.++.|+.+ ..
T Consensus 52 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~ 128 (318)
T 2woz_A 52 IVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVG-LPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDS 128 (318)
T ss_dssp EECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEE-CSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEE
T ss_pred EEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEE-CCCCCccccccceEEE--CCEEEEEcCccCCCCcccce
Confidence 34457788888873 11 27788987763222 1111111111122222 67777777754 25
Q ss_pred EEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC------CCeEEEEEcCCCeeeee--
Q 015438 193 VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS------DDCIYVYDLEANKLSLR-- 264 (407)
Q Consensus 193 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------dg~i~i~d~~~~~~~~~-- 264 (407)
+.+||..+.+.......... ..+| ..+. .++++++.|+. -..+.+||+.+.+-...
T Consensus 129 ~~~yd~~~~~W~~~~~~p~~----------r~~~----~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~ 192 (318)
T 2woz_A 129 VLCYDPVAAKWSEVKNLPIK----------VYGH----NVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAP 192 (318)
T ss_dssp EEEEETTTTEEEEECCCSSC----------EESC----EEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECC
T ss_pred EEEEeCCCCCEeECCCCCCc----------cccc----EEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCC
Confidence 88899887765543322110 0011 1122 36667777764 23599999987753221
Q ss_pred eeccCCCeEEEEecCCCCCEEEEEeCC-----CcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCC--
Q 015438 265 ILAHTSDVNTVCFGDESGHLIYSGSDD-----NLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKD-- 337 (407)
Q Consensus 265 ~~~~~~~v~~i~~s~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~d-- 337 (407)
+...... .+++. .++.+++.|+.+ ..+.+||+... .-..+..+.........+.+ +++.++.|+.+
T Consensus 193 ~p~~r~~-~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~ 265 (318)
T 2woz_A 193 MKTPRSM-FGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTN--KWEVMTEFPQERSSISLVSL--AGSLYAIGGFAMI 265 (318)
T ss_dssp CSSCCBS-CEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTC--CEEECCCCSSCCBSCEEEEE--TTEEEEECCBCCB
T ss_pred CCCCccc-ceEEE--ECCEEEEEcCcCCCCccceEEEEECCCC--eEEECCCCCCcccceEEEEE--CCEEEEECCeecc
Confidence 2111111 22333 246777777654 35778888622 11112112111112222333 56777777754
Q ss_pred ------------CcEEEEECCC
Q 015438 338 ------------QAIKLWDIRK 347 (407)
Q Consensus 338 ------------g~i~iwd~~~ 347 (407)
..+.+||+.+
T Consensus 266 ~~~~~~~~~~~~~~v~~yd~~~ 287 (318)
T 2woz_A 266 QLESKEFAPTEVNDIWKYEDDK 287 (318)
T ss_dssp C----CCBCCBCCCEEEEETTT
T ss_pred CCCCceeccceeeeEEEEeCCC
Confidence 3467777765
No 316
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.86 E-value=0.047 Score=47.36 Aligned_cols=187 Identities=16% Similarity=0.124 Sum_probs=94.6
Q ss_pred CCEEEEEeCC----CeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCC-----CeEEEEECCCCceecc
Q 015438 136 GSLFVAGFQA----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-----PIVHIVDVGSGTMESL 206 (407)
Q Consensus 136 ~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----g~i~vwd~~~~~~~~~ 206 (407)
+..++.|+.+ ..+.+||+.+..... ..........-..+.+ +++.++.|+.+ ..+.+||..+.+....
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQ-VAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEE
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeE-cccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeC
Confidence 3455556543 458899988763222 1111111111112222 67777787754 3588899887765443
Q ss_pred ccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCC-----eEEEEEcCCCeeeee--eeccCCCeEEEEecC
Q 015438 207 ANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD-----CIYVYDLEANKLSLR--ILAHTSDVNTVCFGD 279 (407)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~--~~~~~~~v~~i~~s~ 279 (407)
...... ...| ..+.+ ++++++.|+.++ .+.+||+.+.+-... +...... .+++.
T Consensus 93 ~~~p~~----------r~~~----~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-- 153 (302)
T 2xn4_A 93 ANMRDR----------RSTL----GAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSS-VGVGV-- 153 (302)
T ss_dssp CCCSSC----------CBSC----EEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBS-CEEEE--
T ss_pred CCCCcc----------ccce----EEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccC-ceEEE--
Confidence 322110 0011 11222 567777777553 588999887653222 2111111 22333
Q ss_pred CCCCEEEEEeCC-------CcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCC-----CcEEEEECCC
Q 015438 280 ESGHLIYSGSDD-------NLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKD-----QAIKLWDIRK 347 (407)
Q Consensus 280 ~~~~~l~s~~~d-------~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~ 347 (407)
.++.+++.|+.+ ..+.+||+... .-..+..+.........+.+ +++.++.|+.+ ..+.+||+.+
T Consensus 154 ~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 229 (302)
T 2xn4_A 154 VGGLLYAVGGYDVASRQCLSTVECYNATTN--EWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTT 229 (302)
T ss_dssp ETTEEEEECCEETTTTEECCCEEEEETTTT--EEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTT
T ss_pred ECCEEEEEeCCCCCCCccccEEEEEeCCCC--cEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCC
Confidence 246677777643 35888998621 11111112111112223333 67777888764 3688999876
Q ss_pred C
Q 015438 348 M 348 (407)
Q Consensus 348 ~ 348 (407)
.
T Consensus 230 ~ 230 (302)
T 2xn4_A 230 N 230 (302)
T ss_dssp T
T ss_pred C
Confidence 4
No 317
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.85 E-value=0.057 Score=46.94 Aligned_cols=186 Identities=11% Similarity=0.093 Sum_probs=95.4
Q ss_pred CEEEEEeC--CCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCC----CeEEEEECCCCceecccccc
Q 015438 137 SLFVAGFQ--ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS----PIVHIVDVGSGTMESLANVT 210 (407)
Q Consensus 137 ~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d----g~i~vwd~~~~~~~~~~~~~ 210 (407)
.+++.|+. ...+.+||..++.-.. .............+.+ ++..++.|+.+ ..+.+||..+.+........
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTD-IRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEE-CCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEec-CCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 35556654 3578999998864222 1111111111222222 67777788755 67889999887654432211
Q ss_pred ccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCC------CeEEEEEcCCCeeeee--eeccCCCeEEEEecCCCC
Q 015438 211 EIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD------DCIYVYDLEANKLSLR--ILAHTSDVNTVCFGDESG 282 (407)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------g~i~i~d~~~~~~~~~--~~~~~~~v~~i~~s~~~~ 282 (407)
.. .. ....+.+ ++++++.|+.+ ..+.+||+.+.+-... +...... .+++. .++
T Consensus 90 ~~----------r~----~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~--~~~ 150 (306)
T 3ii7_A 90 TP----------RD----SLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCS-HGMVE--ANG 150 (306)
T ss_dssp SC----------CB----SCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBS-CEEEE--ETT
T ss_pred cc----------cc----ceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcce-eEEEE--ECC
Confidence 10 00 1112222 66777777755 4699999987753222 2111111 12222 245
Q ss_pred CEEEEEeC---------CCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCC-----CcEEEEECCCC
Q 015438 283 HLIYSGSD---------DNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKD-----QAIKLWDIRKM 348 (407)
Q Consensus 283 ~~l~s~~~---------d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~ 348 (407)
.+++.|+. -..+.+||+... .-..+..+......-..+.+ +++.++.|+.+ ..+.+||+.+.
T Consensus 151 ~iyv~GG~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 151 LIYVCGGSLGNNVSGRVLNSCEVYDPATE--TWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp EEEEECCEESCTTTCEECCCEEEEETTTT--EEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTT
T ss_pred EEEEECCCCCCCCcccccceEEEeCCCCC--eEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCC
Confidence 67777653 345888998621 11111111111111222333 66777777754 45888998764
No 318
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.85 E-value=0.095 Score=42.75 Aligned_cols=157 Identities=13% Similarity=0.061 Sum_probs=84.5
Q ss_pred EEEEEEECCCCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCe
Q 015438 171 TVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDC 250 (407)
Q Consensus 171 ~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 250 (407)
.+.+++|+|++.+.++ .+|.++-.+..+............. ...+... ..++.|.|+|.+.++ .||.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~I--------G~~Gw~~-F~a~~fD~~G~LYav--~dG~ 108 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKI--------GNGGWNQ-FQFLFFDPNGYLYAV--SKDK 108 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEE--------ECSCGGG-CSEEEECTTSCEEEE--ETTE
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEe--------ccccccc-ceEEEECCCCCEEEe--CCCE
Confidence 4779999999886666 7787777666443322211110000 0001111 467899999987666 5699
Q ss_pred EEEEEcCCCeeee------ee-eccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCc-eeeeec--cccCCeE
Q 015438 251 IYVYDLEANKLSL------RI-LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGK-PAGVLM--GHLEGIT 320 (407)
Q Consensus 251 i~i~d~~~~~~~~------~~-~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~-~~~~~~--~~~~~i~ 320 (407)
|+-++..+...-. .+ ...=..+..|.+. ++|.+.+.. |+.+.-+.........- ...... ..-..-.
T Consensus 109 iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~-p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr 185 (236)
T 1tl2_A 109 LYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFH-PNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFK 185 (236)
T ss_dssp EEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEEC-TTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEE
T ss_pred EEEeCCCcCCCCceeccccEeccCCCCceEEEEEC-CCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEE
Confidence 9988864322111 11 1111467888886 889877666 77754332210000000 001111 1122334
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEECCC
Q 015438 321 FIDSRGDGRYLISNGKDQAIKLWDIRK 347 (407)
Q Consensus 321 ~~~~s~~~~~l~s~~~dg~i~iwd~~~ 347 (407)
.+.|.+++...++. ++ ++|-...
T Consensus 186 ~l~f~~~G~l~~v~--~g--~~Y~~~~ 208 (236)
T 1tl2_A 186 FLFFSSVGTLFGVQ--GG--KFYEDYP 208 (236)
T ss_dssp EEEECTTSCEEEEE--TT--EEEEESC
T ss_pred EEEECCCCcEEEEe--CC--eEEecCC
Confidence 56699999877766 66 5555444
No 319
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.85 E-value=0.025 Score=50.95 Aligned_cols=122 Identities=16% Similarity=0.238 Sum_probs=79.3
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeE----------EeE-eeeccc----cceEEEEEEECCC---CCeEEEE
Q 015438 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGWK----------IQK-DILAKS----LRWTVTDTSLSPD---QRHLVYA 187 (407)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~----------~~~-~~~~~~----~~~~v~~~~~sp~---~~~l~~~ 187 (407)
.|..+..+|+|++||..+. ..|.|-.+..+.. +.. ...... ...+|..+.|+|- +..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 6778999999999998854 6899988873310 010 111111 2457999999994 5679999
Q ss_pred eCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEee--CCCeEEEE
Q 015438 188 SMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS--SDDCIYVY 254 (407)
Q Consensus 188 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~i~ 254 (407)
..|+.|++||+........ .+..... .| ........|.+++|..++-.|++.+ .+|.|+-.
T Consensus 146 tsD~~Ir~yDl~~s~~~P~-~L~k~~~--~f---g~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPI-VLNKPNN--SF---GLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ETTSCEEEEETTCTTSCCE-EESCCCS--EE---ESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ecCCEEEEEEcccCCCCCc-chhcccc--cc---CCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 9999999999986332222 1111111 11 1112235799999999887666644 88888765
No 320
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.76 E-value=0.2 Score=44.63 Aligned_cols=201 Identities=8% Similarity=-0.058 Sum_probs=97.1
Q ss_pred CCceEEEEECCC---CCEEEEEeC-C-----CeEEEEEcCCCeE--EeEeee-cc---ccceEEEEEEECCCCCeEEEEe
Q 015438 124 TSRAYVSQFSAD---GSLFVAGFQ-A-----SQIRIYDVERGWK--IQKDIL-AK---SLRWTVTDTSLSPDQRHLVYAS 188 (407)
Q Consensus 124 ~~~v~~~~~s~~---~~~l~~~~~-d-----g~i~iwd~~~~~~--~~~~~~-~~---~~~~~v~~~~~sp~~~~l~~~~ 188 (407)
......++|+|+ +..|.++.. . +.|..|+...+.. ...... .. ........++|.|+|.+.++.+
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 456889999998 455544433 2 5788888764311 111111 11 1111245799999997666643
Q ss_pred CC-------------CeEEEEECCCCceecccccccc--ccceeeeecCCCCccccEEEEEEeC-CCCEEEEeeCCCe--
Q 015438 189 MS-------------PIVHIVDVGSGTMESLANVTEI--HDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSDDC-- 250 (407)
Q Consensus 189 ~d-------------g~i~vwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~-- 250 (407)
.. |.|.-++... ....--..... .....+.. ++. ....++|+| ++.++++-.....
T Consensus 154 ~~~~~~~~~d~~~~~g~I~ri~~dG-~~p~~npf~~~~~~~~~i~a~----G~r-np~g~a~d~~~g~l~v~d~g~~~~~ 227 (352)
T 2ism_A 154 EVYERELAQDLASLGGKILRLTPEG-EPAPGNPFLGRRGARPEVYSL----GHR-NPQGLAWHPKTGELFSSEHGPSGEQ 227 (352)
T ss_dssp CTTCGGGGGCTTCSSSEEEEECTTS-SBCTTCTTTTCTTSCTTEEEE----CCS-EECCCEECTTTCCEEEEEECC----
T ss_pred CCCCCccccCCCCCceEEEEEcCCC-CCCCCCcccCCCCCCccEEEE----cCC-CcccEEEECCCCCEEEEEcCCCCCC
Confidence 21 4555555432 11000000000 00000000 111 256688999 5665444332222
Q ss_pred ------EEEEEcCCCe------------------eeeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCC-
Q 015438 251 ------IYVYDLEANK------------------LSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVK- 305 (407)
Q Consensus 251 ------i~i~d~~~~~------------------~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~- 305 (407)
|.+. ..+. ++..+ .+......++|. +++++++.-..+.|...++......
T Consensus 228 ~~~~dei~~i--~~G~nyGwp~~~g~~~~~~~~~p~~~~-~~~~ap~G~~~~--~G~l~v~~~~~~~v~~v~~~~~~~~~ 302 (352)
T 2ism_A 228 GYGHDEVNLI--VPGGNYGWPRVVGRGNDPRYRDPLYFW-PQGFPPGNLAFF--RGDLYVAGLRGQALLRLVLEGERGRW 302 (352)
T ss_dssp --CCCEEEEE--CTTCBCCTTTCCSCCCCTTSCCCSEEC-TTCCCEEEEEEE--TTEEEEEETTTTEEEEEEEEEETTEE
T ss_pred CCCCeEEEEe--ccCCcCCCCcccCCCCCCCCcCCeEec-CCCCCCcceEEE--CCEEEEEECCCCEEEEEEECCCCcce
Confidence 3332 2222 22222 222345677773 5667766666778888877521100
Q ss_pred -CceeeeeccccCCeEEEEecCCCCEEEEEe
Q 015438 306 -GKPAGVLMGHLEGITFIDSRGDGRYLISNG 335 (407)
Q Consensus 306 -~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~ 335 (407)
......+..-...+..+++.|||.++++..
T Consensus 303 ~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 303 RVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp EEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred eecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 000122212235788999999998766654
No 321
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.75 E-value=0.078 Score=46.33 Aligned_cols=183 Identities=13% Similarity=0.074 Sum_probs=92.6
Q ss_pred EEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeC-----C------CeEEEEECCCCceeccc
Q 015438 139 FVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM-----S------PIVHIVDVGSGTMESLA 207 (407)
Q Consensus 139 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-----d------g~i~vwd~~~~~~~~~~ 207 (407)
++.|+ ..+.+||..++.-............ -.++ ...+++.++.|+. . ..+.+||..+.+.....
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~-~~~~-~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKN-HVSL-VTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSS-EEEE-ECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCcc-ceEE-EEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 44454 5799999988753321111111111 1222 2347788888873 1 13778898887654432
Q ss_pred cccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCC--------CeEEEEEcCCCeeee--eeeccCCCeEEEEe
Q 015438 208 NVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD--------DCIYVYDLEANKLSL--RILAHTSDVNTVCF 277 (407)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--------g~i~i~d~~~~~~~~--~~~~~~~~v~~i~~ 277 (407)
..... ...-..+.+ ++++++.|+.+ ..+.+||+.+.+-.. .+...... .+++.
T Consensus 84 ~~p~~--------------r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~ 146 (315)
T 4asc_A 84 PLPSP--------------RCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYG-HTVLS 146 (315)
T ss_dssp CBSSC--------------EESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEE
T ss_pred CCCcc--------------hhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccc-eeEEE
Confidence 22110 001111222 56677777632 459999998765322 22111111 22233
Q ss_pred cCCCCCEEEEEeC-C-----CcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCC-----cEEEEECC
Q 015438 278 GDESGHLIYSGSD-D-----NLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQ-----AIKLWDIR 346 (407)
Q Consensus 278 s~~~~~~l~s~~~-d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg-----~i~iwd~~ 346 (407)
.++.+++.|+. + ..+.+||.... .-..+..+......-.++.+ +++.++.|+.++ .+.+||+.
T Consensus 147 --~~~~iyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~ 220 (315)
T 4asc_A 147 --HMDLVYVIGGKGSDRKCLNKMCVYDPKKF--EWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSIT 220 (315)
T ss_dssp --ETTEEEEECCBCTTSCBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETT
T ss_pred --ECCEEEEEeCCCCCCcccceEEEEeCCCC--eEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECC
Confidence 34567777775 2 46888998622 11111111111111223333 677788887654 48888887
Q ss_pred CC
Q 015438 347 KM 348 (407)
Q Consensus 347 ~~ 348 (407)
+.
T Consensus 221 ~~ 222 (315)
T 4asc_A 221 DN 222 (315)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 322
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.70 E-value=0.31 Score=43.41 Aligned_cols=200 Identities=10% Similarity=0.007 Sum_probs=98.3
Q ss_pred CCceEEEEECCC---CCEEEEEeC----C----CeEEEEEcCCC--eE--EeEee--eccccceEEEEEEECCCCCeEEE
Q 015438 124 TSRAYVSQFSAD---GSLFVAGFQ----A----SQIRIYDVERG--WK--IQKDI--LAKSLRWTVTDTSLSPDQRHLVY 186 (407)
Q Consensus 124 ~~~v~~~~~s~~---~~~l~~~~~----d----g~i~iwd~~~~--~~--~~~~~--~~~~~~~~v~~~~~sp~~~~l~~ 186 (407)
......|+|+|+ +..|.++.. + +.|..|+...+ .. ...+. ...........+.|.|||.+.++
T Consensus 72 ~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt 151 (354)
T 3a9g_A 72 EAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYIT 151 (354)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEE
T ss_pred CCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEE
Confidence 356889999997 444444332 2 56777877653 11 11111 11111112467899999987666
Q ss_pred EeCC-------------CeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeC-CCCEEEEeeCCC---
Q 015438 187 ASMS-------------PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSDD--- 249 (407)
Q Consensus 187 ~~~d-------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg--- 249 (407)
.+.. |.|.-++.... ... -+.. .....+. .++. ....++|+| +++++++-....
T Consensus 152 ~G~~~~~~~~~d~~~~~G~I~ri~~dG~-~p~-~npf--~~~~i~a----~G~r-np~Gla~d~~~g~l~v~d~g~~~~d 222 (354)
T 3a9g_A 152 TGDAADPRLAQDLSSLAGKILRVDEEGR-PPA-DNPF--PNSPIWS----YGHR-NPQGIDWHRASGVMVATEHGPVGHD 222 (354)
T ss_dssp CCCTTCGGGGTCTTCCSSEEEEECTTSC-CCT-TSSS--TTCCEEE----ECCS-CCCEEEECTTTCCEEEEECCSSSCC
T ss_pred ECCCCCCccccCCCCCCeEEEEEcCCCC-CCC-CCCC--CCCcEEE----EccC-CcceEEEeCCCCCEEEEecCCCCCc
Confidence 4322 34444444321 000 0000 0000000 0111 245789999 666544432221
Q ss_pred eEEEEEcCC--------C--------eeeeeeeccCCCeEEEEecC------CCCCEEEEEeCCCcEEEEeCcccCCCCc
Q 015438 250 CIYVYDLEA--------N--------KLSLRILAHTSDVNTVCFGD------ESGHLIYSGSDDNLCKVWDRRCLNVKGK 307 (407)
Q Consensus 250 ~i~i~d~~~--------~--------~~~~~~~~~~~~v~~i~~s~------~~~~~l~s~~~d~~i~vwd~~~~~~~~~ 307 (407)
.|.+...-. + .++..+.........++|.. .++.++++.-..+.|...++.. .+.
T Consensus 223 ei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~---~g~ 299 (354)
T 3a9g_A 223 EVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGD---NME 299 (354)
T ss_dssp EEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECG---GGC
T ss_pred EEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECC---CCc
Confidence 244332110 0 12222211233567788731 4567777666677888888762 122
Q ss_pred ee--eee-ccccCCeEEEEecCCCCEEEEEe
Q 015438 308 PA--GVL-MGHLEGITFIDSRGDGRYLISNG 335 (407)
Q Consensus 308 ~~--~~~-~~~~~~i~~~~~s~~~~~l~s~~ 335 (407)
.. ..+ .+....+..+++.|||.++++..
T Consensus 300 ~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 300 VRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred ccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 21 222 22245789999999998766654
No 323
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.69 E-value=0.045 Score=44.62 Aligned_cols=152 Identities=11% Similarity=0.059 Sum_probs=85.7
Q ss_pred cEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeee------eeee--ccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCc
Q 015438 229 GIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLS------LRIL--AHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRR 300 (407)
Q Consensus 229 ~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~------~~~~--~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~ 300 (407)
.+..++|+|+|.+.++ .+|.++-.+..+.... ..+- +.. ...++.|. +++.+.++ .||.|.-++..
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD-~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFD-PNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEEC-TTSCEEEE--ETTEEEEESCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEEC-CCCCEEEe--CCCEEEEeCCC
Confidence 5678999999986665 6788888776553221 1110 111 14677885 88987777 56988888763
Q ss_pred ccCCCCceee---ee-ccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccc--cCCCccccc-cceeeeCCCC
Q 015438 301 CLNVKGKPAG---VL-MGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASC--NLGFRSYEW-DYRWMDYPPQ 373 (407)
Q Consensus 301 ~~~~~~~~~~---~~-~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~~~~~~~~-~v~~~~~~~~ 373 (407)
... ...-+. .+ .+--..+..|.|.|+|.+.+.. |+.+.-+...+.....-. ........| .++.+.|.++
T Consensus 116 ~~~-~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~ 192 (236)
T 1tl2_A 116 QSD-TDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSV 192 (236)
T ss_dssp CST-TCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTT
T ss_pred cCC-CCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCC
Confidence 211 111110 01 1111357899999999877766 777543322211110000 000121223 4567779999
Q ss_pred CCccCCCCCcceEEEeCCc
Q 015438 374 ARDLKHPCDQSVATYKGHS 392 (407)
Q Consensus 374 ~~~l~~~~~~~v~~~~gh~ 392 (407)
+.++++. ++ ++|++..
T Consensus 193 G~l~~v~-~g--~~Y~~~~ 208 (236)
T 1tl2_A 193 GTLFGVQ-GG--KFYEDYP 208 (236)
T ss_dssp SCEEEEE-TT--EEEEESC
T ss_pred CcEEEEe-CC--eEEecCC
Confidence 9998887 33 5666554
No 324
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.64 E-value=0.24 Score=51.44 Aligned_cols=101 Identities=13% Similarity=0.226 Sum_probs=60.0
Q ss_pred CCEEEEee----------CCCeEEEEEcCCCeeeeee-eccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCc
Q 015438 239 GRELVAGS----------SDDCIYVYDLEANKLSLRI-LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGK 307 (407)
Q Consensus 239 ~~~l~~~~----------~dg~i~i~d~~~~~~~~~~-~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~ 307 (407)
..+|++|+ ..|.|++|++..++..... ....++|++++-- .|.++ +|- ..+|++|++. ..+
T Consensus 844 ~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~--~g~Ll-a~i-g~~l~vy~l~----~~~ 915 (1158)
T 3ei3_A 844 NTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF--NGKLL-ASI-NSTVRLYEWT----TEK 915 (1158)
T ss_dssp CCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE--TTEEE-EEE-TTEEEEEEEC----TTS
T ss_pred CEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee--CCEEE-EEc-CCEEEEEECC----CCc
Confidence 36888886 3578999999754322111 1346889998753 45444 433 4689999996 333
Q ss_pred eeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 015438 308 PAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRK 347 (407)
Q Consensus 308 ~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 347 (407)
.+..-..+-..|..+.....+++++.|..-..|.++..+.
T Consensus 916 ~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~ 955 (1158)
T 3ei3_A 916 ELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKP 955 (1158)
T ss_dssp CEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEET
T ss_pred eEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEc
Confidence 3331111122233333333578899998877777766543
No 325
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.62 E-value=0.071 Score=46.41 Aligned_cols=188 Identities=14% Similarity=0.098 Sum_probs=96.3
Q ss_pred CCCEEEEEeC----CCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeC----C-----CeEEEEECCCC
Q 015438 135 DGSLFVAGFQ----ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM----S-----PIVHIVDVGSG 201 (407)
Q Consensus 135 ~~~~l~~~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~----d-----g~i~vwd~~~~ 201 (407)
++..++.|+. -..+.+||..+..-... ............+.+ ++++++.|+. + ..+.+||..+.
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~ 100 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRL-ADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTN 100 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEEC-CCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeEC-CCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCC
Confidence 4566666663 24689999887632221 111111111122222 6677777775 2 36888998877
Q ss_pred ceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCC-----CeEEEEEcCCCeeeee--eeccCCCeEE
Q 015438 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-----DCIYVYDLEANKLSLR--ILAHTSDVNT 274 (407)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~--~~~~~~~v~~ 274 (407)
+.......... . .....+.+ ++++++.|+.+ ..+.+||+.+.+-... +....... +
T Consensus 101 ~W~~~~~~p~~----------r----~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~ 163 (308)
T 1zgk_A 101 QWSPCAPMSVP----------R----NRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGV-G 163 (308)
T ss_dssp EEEECCCCSSC----------C----BTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSC-E
T ss_pred eEeECCCCCcC----------c----cccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccce-E
Confidence 65443322110 0 01112222 66777777643 3689999987653221 21111112 2
Q ss_pred EEecCCCCCEEEEEeCC-----CcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCC-----CcEEEEE
Q 015438 275 VCFGDESGHLIYSGSDD-----NLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKD-----QAIKLWD 344 (407)
Q Consensus 275 i~~s~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~d-----g~i~iwd 344 (407)
++. .++.+++.|+.+ ..+.+||+... .-..+..+.........+.+ +++.++.|+.+ ..+.+||
T Consensus 164 ~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd 237 (308)
T 1zgk_A 164 VAV--LNRLLYAVGGFDGTNRLNSAECYYPERN--EWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYD 237 (308)
T ss_dssp EEE--ETTEEEEECCBCSSCBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEE
T ss_pred EEE--ECCEEEEEeCCCCCCcCceEEEEeCCCC--eEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEe
Confidence 233 256677777654 45888888622 11111111111112223333 67777777764 5688999
Q ss_pred CCCC
Q 015438 345 IRKM 348 (407)
Q Consensus 345 ~~~~ 348 (407)
+.+.
T Consensus 238 ~~~~ 241 (308)
T 1zgk_A 238 VETE 241 (308)
T ss_dssp TTTT
T ss_pred CCCC
Confidence 8764
No 326
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.46 E-value=0.44 Score=42.32 Aligned_cols=170 Identities=11% Similarity=0.114 Sum_probs=89.1
Q ss_pred CCCeEEEEECCCC--ceeccccccccccceeeeecCCCCccccEEEEEEeC--CCC-EEEEe-eC--CCeEEEEEcCCCe
Q 015438 189 MSPIVHIVDVGSG--TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST--DGR-ELVAG-SS--DDCIYVYDLEANK 260 (407)
Q Consensus 189 ~dg~i~vwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~-~l~~~-~~--dg~i~i~d~~~~~ 260 (407)
.+|.|.++|..+. +... ...... ...........+.+.+ ++. +|+++ .. +..|.+|++....
T Consensus 81 ~~G~I~~~d~~~~~~~~~~-l~~~g~---------~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~ 150 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSE-LEIIGN---------TLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEE 150 (355)
T ss_dssp -CCEEEEEETTSSSCCEEE-CEEECS---------SCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTT
T ss_pred CCCeEEEEecCCCCCceEE-EEccCC---------CCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCC
Confidence 6899999998743 2211 111110 0011223455666655 454 34444 33 4678887775432
Q ss_pred ----eeeeeecc-CCCeEEEEecCCCCCEEEEEeC-----------------CCcEEEEeCcccCCCCceeeeeccccCC
Q 015438 261 ----LSLRILAH-TSDVNTVCFGDESGHLIYSGSD-----------------DNLCKVWDRRCLNVKGKPAGVLMGHLEG 318 (407)
Q Consensus 261 ----~~~~~~~~-~~~v~~i~~s~~~~~~l~s~~~-----------------d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 318 (407)
.+..+.+. -...+++.+. ++|.++++... .|.|..+|. ++ +..+...-..
T Consensus 151 ~~~~~~~~~~g~~~~~pND~~v~-~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~------~~-~~~~~~~l~~ 222 (355)
T 3sre_A 151 KSLLHLKTIRHKLLPSVNDIVAV-GPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP------ND-VRVVAEGFDF 222 (355)
T ss_dssp TEEEEEEEECCTTCSSEEEEEEE-ETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT------TC-CEEEEEEESS
T ss_pred CEEEEEeccccCCCCCCceEEEe-CCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC------Ce-EEEeecCCcc
Confidence 22223221 2357889996 67877666541 234444443 22 2222223345
Q ss_pred eEEEEecCCCCEEEEEe-CCCcEEEEECCCCCCcccccCCCccccccceeeeCCC-CCCccC
Q 015438 319 ITFIDSRGDGRYLISNG-KDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPP-QARDLK 378 (407)
Q Consensus 319 i~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~ 378 (407)
.+.++|+||++.|..+. ..+.|..|++.....+..... . ........+...+ +|+++.
T Consensus 223 pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~-~-~~~g~PDGi~vD~e~G~lwv 282 (355)
T 3sre_A 223 ANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRV-L-SFDTLVDNISVDPVTGDLWV 282 (355)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEE-E-ECSSEEEEEEECTTTCCEEE
T ss_pred cCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEE-E-eCCCCCceEEEeCCCCcEEE
Confidence 78999999998776655 578899999874222211000 1 1112234556666 476665
No 327
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.44 E-value=0.07 Score=47.55 Aligned_cols=197 Identities=12% Similarity=0.077 Sum_probs=96.7
Q ss_pred CCCEEEEEeC-C---------CeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCC--------------
Q 015438 135 DGSLFVAGFQ-A---------SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-------------- 190 (407)
Q Consensus 135 ~~~~l~~~~~-d---------g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-------------- 190 (407)
++++++.|+. + ..+.+||+.+..-...............++. .++++++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~ 142 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEA 142 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcCCCcCcccccchhhc
Confidence 5677777765 2 4689999987632221111101111122222 477888888754
Q ss_pred -------------------------CeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEe
Q 015438 191 -------------------------PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG 245 (407)
Q Consensus 191 -------------------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 245 (407)
..+.+||..+.+.......... .. .. .+++.. ++++++.|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~------------~~-~~-~~~~~~-~~~iyv~G 207 (357)
T 2uvk_A 143 GKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWY------------GT-AG-AAVVNK-GDKTWLIN 207 (357)
T ss_dssp TTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSC------------CC-BS-CEEEEE-TTEEEEEC
T ss_pred CCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCC------------Cc-cc-ccEEEE-CCEEEEEe
Confidence 5789999988765543221110 00 00 122222 56666776
Q ss_pred eC------CCeEEEEEc--CCCee--eeeeeccCCCe-EEEEecCCCCCEEEEEeCC----------------------C
Q 015438 246 SS------DDCIYVYDL--EANKL--SLRILAHTSDV-NTVCFGDESGHLIYSGSDD----------------------N 292 (407)
Q Consensus 246 ~~------dg~i~i~d~--~~~~~--~~~~~~~~~~v-~~i~~s~~~~~~l~s~~~d----------------------~ 292 (407)
+. ...+.+||+ .+.+- +..+....... .+++. .++.+++.|+.+ .
T Consensus 208 G~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~ 285 (357)
T 2uvk_A 208 GEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGI--SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSY 285 (357)
T ss_dssp CEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEE--ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEE
T ss_pred eecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEE--ECCEEEEEcCccccCCcccccccceecccccccee
Confidence 53 345788887 44332 22221111111 12333 356677777632 2
Q ss_pred cEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCC------cEEEEECCCCCCcccc
Q 015438 293 LCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQ------AIKLWDIRKMSSNASC 354 (407)
Q Consensus 293 ~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg------~i~iwd~~~~~~~~~~ 354 (407)
.+.+||+... .-..+..+......-.++. .+++.++.||.++ .|.++++++.+.....
T Consensus 286 ~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 286 STDIHLWHNG--KWDKSGELSQGRAYGVSLP--WNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp CCEEEECC-----CEEEEECSSCCBSSEEEE--ETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eEEEEecCCC--ceeeCCCCCCCcccceeEE--eCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 4778888632 2223333322222222333 3678888888543 3666688877665443
No 328
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.42 E-value=0.014 Score=51.56 Aligned_cols=195 Identities=10% Similarity=0.032 Sum_probs=102.7
Q ss_pred CEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEE--CC-CCCeEEEE-eCCCeEEEEECCCCceecccccccc
Q 015438 137 SLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSL--SP-DQRHLVYA-SMSPIVHIVDVGSGTMESLANVTEI 212 (407)
Q Consensus 137 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~--sp-~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~ 212 (407)
..+++++.||.|.-+|..+|+........ ...++....- .+ ++..++.. +.||.|+.++..++...........
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~--~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE--NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG--GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC--ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 46888999999999999999777765433 1112222110 11 23333343 5899999999887744322221111
Q ss_pred ccceeeeecCCCCccccEEE---EEE-----eCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccC--CC-----eEEEEe
Q 015438 213 HDGLDFSAADDGGYSFGIFS---LKF-----STDGRELVAGSSDDCIYVYDLEANKLSLRILAHT--SD-----VNTVCF 277 (407)
Q Consensus 213 ~~~~~~~~~~~~~~~~~v~~---~~~-----s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~-----v~~i~~ 277 (407)
.. ..++.. ... ...+..+++|+.+|.++-.|+++|+.+-.+.... +. ..|...
T Consensus 89 v~------------~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~ 156 (339)
T 2be1_A 89 VS------------TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPE 156 (339)
T ss_dssp HT------------TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC------------
T ss_pred ee------------ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccc
Confidence 10 001110 000 0134578999999999999999999988775321 10 011111
Q ss_pred c----CCCCCEEEEEeCCCcEEEEeCcccCCCCceeee-----eccccCC--e-EEEEecCCCCEEEEEeCCCcEEEEEC
Q 015438 278 G----DESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGV-----LMGHLEG--I-TFIDSRGDGRYLISNGKDQAIKLWDI 345 (407)
Q Consensus 278 s----~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~-----~~~~~~~--i-~~~~~s~~~~~l~s~~~dg~i~iwd~ 345 (407)
. +..+..++.+..+..+.+.+ + +++ +-. ....... + .+-..+.|+.+ +.++.||.|.-+|.
T Consensus 157 ~d~~~d~~~~~v~ig~~~y~v~~~~-~----sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~ 229 (339)
T 2be1_A 157 EKIKLQECENMIVIGKTIFELGIHS-Y----DGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDL 229 (339)
T ss_dssp --------CCEEEEEEEEEECEECC-T----TSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECS
T ss_pred cccccccCCCeEEEecceEEEEEEC-C----CCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEEC
Confidence 0 01245677777776777666 3 232 111 1110000 0 00001234565 44677888888888
Q ss_pred CCCCCcc
Q 015438 346 RKMSSNA 352 (407)
Q Consensus 346 ~~~~~~~ 352 (407)
.+++.+.
T Consensus 230 ~~G~~~W 236 (339)
T 2be1_A 230 DFRIARW 236 (339)
T ss_dssp TTCCEEE
T ss_pred CCCcEEE
Confidence 8777654
No 329
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.37 E-value=0.26 Score=48.41 Aligned_cols=199 Identities=16% Similarity=0.096 Sum_probs=104.2
Q ss_pred CCCCEEEEEeCC----CeEEEEEcCCCeEEeEeee-----ccccceEEEEEEECCCCCeEEEEeCC------CeEEEEEC
Q 015438 134 ADGSLFVAGFQA----SQIRIYDVERGWKIQKDIL-----AKSLRWTVTDTSLSPDQRHLVYASMS------PIVHIVDV 198 (407)
Q Consensus 134 ~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~-----~~~~~~~v~~~~~sp~~~~l~~~~~d------g~i~vwd~ 198 (407)
.++..++.|+.+ ..+.+||..++........ .......-..+.+..+++.++.|+.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456777777753 4688999887633222101 11111112233333277788888754 35788998
Q ss_pred CCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCC--eEEEEEcCCCeeeee-----eeccCCC
Q 015438 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD--CIYVYDLEANKLSLR-----ILAHTSD 271 (407)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--~i~i~d~~~~~~~~~-----~~~~~~~ 271 (407)
.+.+.......... ..+| +++...++++++.|+.++ .+.+||+.+.+-... +......
T Consensus 476 ~t~~W~~~~~~p~~----------R~~h-----~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~ 540 (695)
T 2zwa_A 476 KTREWSMIKSLSHT----------RFRH-----SACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLV 540 (695)
T ss_dssp TTTEEEECCCCSBC----------CBSC-----EEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCB
T ss_pred CCCcEEECCCCCCC----------cccc-----eEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccc
Confidence 88765444322110 0111 222323788888887654 699999988753221 1111222
Q ss_pred eEEEEecCCCCCEEEEEeC--C-----CcEEEEeCcccCC----CCceeeeec-cccCCeEEEEecCCCCEEEEEeC---
Q 015438 272 VNTVCFGDESGHLIYSGSD--D-----NLCKVWDRRCLNV----KGKPAGVLM-GHLEGITFIDSRGDGRYLISNGK--- 336 (407)
Q Consensus 272 v~~i~~s~~~~~~l~s~~~--d-----~~i~vwd~~~~~~----~~~~~~~~~-~~~~~i~~~~~s~~~~~l~s~~~--- 336 (407)
..++.+....+.+++.|+. + +.+.+||+..... ....+.... ........+.+ .+++.++.||.
T Consensus 541 ~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~-~~~~iyv~GG~~~~ 619 (695)
T 2zwa_A 541 SAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYI-TPRKLLIVGGTSPS 619 (695)
T ss_dssp SCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEE-ETTEEEEECCBCSS
T ss_pred eeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEe-CCCEEEEECCccCC
Confidence 2335554233677777775 2 4588999873210 001111111 11112223333 33777777774
Q ss_pred -----CCcEEEEECCCC
Q 015438 337 -----DQAIKLWDIRKM 348 (407)
Q Consensus 337 -----dg~i~iwd~~~~ 348 (407)
...|.+||+.+.
T Consensus 620 ~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 620 GLFDRTNSIISLDPLSE 636 (695)
T ss_dssp CCCCTTTSEEEEETTTT
T ss_pred CCCCCCCeEEEEECCCC
Confidence 345889998864
No 330
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.25 E-value=0.39 Score=44.41 Aligned_cols=110 Identities=16% Similarity=0.247 Sum_probs=61.8
Q ss_pred EEEEEECCCCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCC---CCEEEEeeC-
Q 015438 172 VTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD---GRELVAGSS- 247 (407)
Q Consensus 172 v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~- 247 (407)
...|+|.|+|+++++-...+.|++++..++....+..+.... ...........|+|+|+ +..|++...
T Consensus 29 P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~--------~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~ 100 (454)
T 1cru_A 29 PHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIV--------NDADGQNGLLGFAFHPDFKNNPYIYISGTF 100 (454)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCC--------CCTTSSCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred ceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccc--------cccCCCCceeEEEECCCcCcCCEEEEEEec
Confidence 678999999987776544457888876555433222211100 00012336789999995 555554432
Q ss_pred ------------CCeEEEEEcCCC-------eeee-eeec-cCCCeEEEEecCCCCCEEEEEeC
Q 015438 248 ------------DDCIYVYDLEAN-------KLSL-RILA-HTSDVNTVCFGDESGHLIYSGSD 290 (407)
Q Consensus 248 ------------dg~i~i~d~~~~-------~~~~-~~~~-~~~~v~~i~~s~~~~~~l~s~~~ 290 (407)
...|.-|++... +.+. .+.. .......|+|. ++|.++++.+.
T Consensus 101 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~-pDG~Lyv~~Gd 163 (454)
T 1cru_A 101 KNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIG-PDQKIYYTIGD 163 (454)
T ss_dssp ECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEEC-TTSCEEEEECC
T ss_pred cccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeEC-CCCeEEEEECC
Confidence 235666665432 1111 1211 12346889997 78887777553
No 331
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.25 E-value=0.26 Score=51.42 Aligned_cols=205 Identities=10% Similarity=0.077 Sum_probs=120.5
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCc-eecccc
Q 015438 130 SQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGT-MESLAN 208 (407)
Q Consensus 130 ~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~ 208 (407)
.-.+|..+.+|.-. ..++.|+|+++..++....... +|.--.|-... .|+..+ +..|+.|++.... +...+.
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e----~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s~P~k~fd 143 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD----DVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFD 143 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehHHhhhhcccccCC----CceEEEecCCC-eeEEEc-CCeEEEeccCCCCccHHHHh
Confidence 34677777666654 6889999999875555433322 47777785443 344433 4579999997522 222221
Q ss_pred ccccccceeeeecCCCCccccEEEEEEeCCCCEEEEee-------CCCeEEEEEcCCCeeeeeeeccCCCeEEEEec--C
Q 015438 209 VTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-------SDDCIYVYDLEANKLSLRILAHTSDVNTVCFG--D 279 (407)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-------~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s--~ 279 (407)
.. ..+ ....|..-..+++.++++..+ -.|.+.+|..+.+ ....+.+|.+....+... +
T Consensus 144 R~---~~L---------~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~ 210 (1630)
T 1xi4_A 144 RH---SSL---------AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNA 210 (1630)
T ss_pred cc---hhc---------ccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCC
Confidence 11 100 123677777788888766433 3478999988744 334566666555444442 1
Q ss_pred CCCCEEEEEeC---CCcEEEEeCccc-CC----CCceeeeeccc---cCCeEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 015438 280 ESGHLIYSGSD---DNLCKVWDRRCL-NV----KGKPAGVLMGH---LEGITFIDSRGDGRYLISNGKDQAIKLWDIRKM 348 (407)
Q Consensus 280 ~~~~~l~s~~~---d~~i~vwd~~~~-~~----~~~~~~~~~~~---~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 348 (407)
...++++.+.. .+.++|.++... .. ..+.+..+... ..-..++..++.-..+..-+.-|.|.+||+.++
T Consensus 211 ~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~ 290 (1630)
T 1xi4_A 211 EESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG 290 (1630)
T ss_pred CCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccc
Confidence 22234433332 268999998532 00 01111111111 223456777877778888999999999999999
Q ss_pred CCcccc
Q 015438 349 SSNASC 354 (407)
Q Consensus 349 ~~~~~~ 354 (407)
..+..-
T Consensus 291 ~~i~~~ 296 (1630)
T 1xi4_A 291 TCIYMN 296 (1630)
T ss_pred hhhhhc
Confidence 887653
No 332
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.10 E-value=0.52 Score=41.65 Aligned_cols=150 Identities=17% Similarity=0.154 Sum_probs=81.7
Q ss_pred EEEEEECCCCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCC---CCEEEEe---
Q 015438 172 VTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD---GRELVAG--- 245 (407)
Q Consensus 172 v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~--- 245 (407)
...|+|.|+++++++--..|.|++++...+....+..+... ..........|+++|+ +..|++.
T Consensus 34 P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v----------~~~g~~GllGia~~Pdf~~~g~lYv~yt~ 103 (347)
T 3das_A 34 PWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGV----------SPSGEGGLLGIALSPDYASDHMVYAYFTS 103 (347)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTC----------CCBTTBSEEEEEECTTHHHHCEEEEEEEC
T ss_pred ceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCce----------eecCCCCceeeEeccccccCCEEEEEEec
Confidence 67899999998777765589999998665543222111100 0012236789999995 3444442
Q ss_pred eCCCeEEEEEcCCC----------eeee-eee-ccCCCeEEEEecCCCCCEEEEEeC-------------CCcEEEEeCc
Q 015438 246 SSDDCIYVYDLEAN----------KLSL-RIL-AHTSDVNTVCFGDESGHLIYSGSD-------------DNLCKVWDRR 300 (407)
Q Consensus 246 ~~dg~i~i~d~~~~----------~~~~-~~~-~~~~~v~~i~~s~~~~~~l~s~~~-------------d~~i~vwd~~ 300 (407)
..++.|.-|.+..+ +.+. .+. .....-..|.|. +++.++++.+. .|.|.-.+..
T Consensus 104 ~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fg-pDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d 182 (347)
T 3das_A 104 ASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFG-PDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD 182 (347)
T ss_dssp SSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEEC-TTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT
T ss_pred CCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCC-CCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC
Confidence 24456777766541 1111 121 111234569997 78887777542 2444444543
Q ss_pred ccCCC-----CceeeeeccccCCeEEEEecCCCCEEEEE
Q 015438 301 CLNVK-----GKPAGVLMGHLEGITFIDSRGDGRYLISN 334 (407)
Q Consensus 301 ~~~~~-----~~~~~~~~~~~~~i~~~~~s~~~~~l~s~ 334 (407)
..-.. ...+. -.+|.. ...++|+|+|.++++=
T Consensus 183 G~ip~~nPf~~~~i~-a~G~RN-p~Gla~dp~G~L~~~d 219 (347)
T 3das_A 183 GEPAPGNPFPGSPVY-SYGHRN-VQGLAWDDKQRLFASE 219 (347)
T ss_dssp SSBCTTCSSTTCCEE-EBCCSB-CCEEEECTTCCEEEEE
T ss_pred CCccCCCCCCCCeEE-eeCCCC-cceEEECCCCCEEEEe
Confidence 10000 11111 124543 4688999988766543
No 333
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.09 E-value=0.45 Score=43.97 Aligned_cols=111 Identities=10% Similarity=0.061 Sum_probs=60.2
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeecc-----ccceEEEEEEECCC---CCeEEEEeC--------
Q 015438 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK-----SLRWTVTDTSLSPD---QRHLVYASM-------- 189 (407)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~v~~~~~sp~---~~~l~~~~~-------- 189 (407)
..+.++|.|+|+++++-...+.|++++..++.......... .....+..|+|+|+ +..|.++..
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 56799999999977765444578888865553221111111 12345789999995 555544432
Q ss_pred -----CCeEEEEECCCCc--eeccccccccccceeeeecC-CCCccccEEEEEEeCCCCEEEEee
Q 015438 190 -----SPIVHIVDVGSGT--MESLANVTEIHDGLDFSAAD-DGGYSFGIFSLKFSTDGRELVAGS 246 (407)
Q Consensus 190 -----dg~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~ 246 (407)
...|.-+++.... ...... .+...+ ...| ....|.|.|||.+.++.+
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~--------i~~~~p~~~~H--~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVD--------LLAGLPSSKDH--QSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEE--------EEEEECCCSSC--CEEEEEECTTSCEEEEEC
T ss_pred cccccccEEEEEEECCCCCCcCCcEE--------EEEcCCCCCCC--CCCeEeECCCCeEEEEEC
Confidence 1345555553321 110000 011011 1123 468899999998666543
No 334
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.06 E-value=0.24 Score=43.22 Aligned_cols=177 Identities=14% Similarity=0.127 Sum_probs=87.3
Q ss_pred eEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeC----CC-------eEEEEECCCCceeccccccccccc
Q 015438 147 QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM----SP-------IVHIVDVGSGTMESLANVTEIHDG 215 (407)
Q Consensus 147 ~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~----dg-------~i~vwd~~~~~~~~~~~~~~~~~~ 215 (407)
.+.+||..++.............. -.++ ...++..++.|+. ++ .+.+||..+.+..........
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~-~~~~-~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--- 99 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRN-HSSI-VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSA--- 99 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSS-EEEE-ECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSC---
T ss_pred ceEEECCCCCceecccCCccCCcc-ceEE-EEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcc---
Confidence 488999988743332111111111 1222 2457778888873 11 277888887765443222110
Q ss_pred eeeeecCCCCccccEEEEEEeCCCCEEEEeeCC-------CeEEEEEcCCCeeeee--eeccCCCeEEEEecCCCCCEEE
Q 015438 216 LDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-------DCIYVYDLEANKLSLR--ILAHTSDVNTVCFGDESGHLIY 286 (407)
Q Consensus 216 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~--~~~~~~~v~~i~~s~~~~~~l~ 286 (407)
...| ..+.+ ++++++.|+.+ ..+.+||+.+.+-... +...... .+++. .++.+++
T Consensus 100 -------r~~~----~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~--~~~~iyv 163 (318)
T 2woz_A 100 -------RCLF----GLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYG-HNVIS--HNGMIYC 163 (318)
T ss_dssp -------BCSC----EEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEES-CEEEE--ETTEEEE
T ss_pred -------cccc----ceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccc-cEEEE--ECCEEEE
Confidence 0011 11222 56677777653 3588999987653221 1111111 12222 3566777
Q ss_pred EEeC------CCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCC-----CcEEEEECCCC
Q 015438 287 SGSD------DNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKD-----QAIKLWDIRKM 348 (407)
Q Consensus 287 s~~~------d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~ 348 (407)
.|+. -..+.+||+... .-..+..+.........+.+ +++.++.|+.+ ..+.+||+.+.
T Consensus 164 ~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 164 LGGKTDDKKCTNRVFIYNPKKG--DWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp ECCEESSSCBCCCEEEEETTTT--EEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred EcCCCCCCCccceEEEEcCCCC--EEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCC
Confidence 7764 235889998621 11111111111111222333 66777777753 34778888764
No 335
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.90 E-value=0.3 Score=43.50 Aligned_cols=107 Identities=12% Similarity=0.108 Sum_probs=57.1
Q ss_pred EEEEEECCCCCeEEEEeCCCeEEEEECCCCceec-cccccccccceeeeecCCCCccccEEEEEEeCC---CCEEEEee-
Q 015438 172 VTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMES-LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD---GRELVAGS- 246 (407)
Q Consensus 172 v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~- 246 (407)
...|+|.|+++.|+++...|.|++++.. +.... +...... ..........|+++|+ +..|++..
T Consensus 20 P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v----------~~~g~~g~~gia~~pdf~~~g~lYv~~~ 88 (353)
T 2g8s_A 20 PWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDV----------WAHGQGGLLDVVLAPDFAQSRRIWLSYS 88 (353)
T ss_dssp EEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCC----------CCSTTCSEEEEEECTTHHHHCEEEEEEE
T ss_pred cEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCccc----------ccCCCCCceeEEECCCCCCCCEEEEEEe
Confidence 6789999999844455677999999853 22211 1111000 0011235688999996 44554442
Q ss_pred C-------CCeEEEEEcCCC--e--eeee-eec------cCCCeEEEEecCCCCCEEEEEeC
Q 015438 247 S-------DDCIYVYDLEAN--K--LSLR-ILA------HTSDVNTVCFGDESGHLIYSGSD 290 (407)
Q Consensus 247 ~-------dg~i~i~d~~~~--~--~~~~-~~~------~~~~v~~i~~s~~~~~~l~s~~~ 290 (407)
. ...|..|++... + .... +.. .......|.|. +++.++++.+.
T Consensus 89 ~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~-pdG~Lyv~~Gd 149 (353)
T 2g8s_A 89 EVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFD-GKGYLFIALGE 149 (353)
T ss_dssp EECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEEC-SSSEEEEEECC
T ss_pred CCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEEC-CCCcEEEEECC
Confidence 2 235777776532 1 1111 111 11123579997 67866665543
No 336
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.72 E-value=0.47 Score=41.15 Aligned_cols=176 Identities=10% Similarity=0.007 Sum_probs=98.4
Q ss_pred EEEECCCCCEEEEEeCC--------------CeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEe----CC
Q 015438 129 VSQFSADGSLFVAGFQA--------------SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS----MS 190 (407)
Q Consensus 129 ~~~~s~~~~~l~~~~~d--------------g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~----~d 190 (407)
+--++++|.+|+-+... ..|+..+++.+.... + ... .+..|+++++.|+... ..
T Consensus 57 ~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~--l-~~~-----~~~~~s~~g~~Iy~~~~~~~~~ 128 (302)
T 3s25_A 57 AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV--L-DPD-----PCIYASLIGNYIYYLHYDTQTA 128 (302)
T ss_dssp EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE--E-ECS-----CEEEEEEETTEEEEEEESSSSC
T ss_pred eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE--e-ecC-----CccEEEEeCCEEEEEeecCCCC
Confidence 34568899988877543 367777877653211 1 111 1236778888888775 33
Q ss_pred CeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeC-CCeEEEEEcCCCeeeeeeeccC
Q 015438 191 PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-DDCIYVYDLEANKLSLRILAHT 269 (407)
Q Consensus 191 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~ 269 (407)
..|+..++.......+... .+ ..|+++++.|+..+. ...|++.++..+.....+.
T Consensus 129 ~~Iy~~~~dGs~~~~lt~~-------------------~~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~--- 184 (302)
T 3s25_A 129 TSLYRIRIDGEEKKKIKNH-------------------YL--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD--- 184 (302)
T ss_dssp EEEEEEETTSCCCEEEESS-------------------CC--CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC---
T ss_pred ceEEEEECCCCCeEEEeCC-------------------Cc--eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC---
Confidence 4566666664433222210 11 345778887776654 6789999988765433332
Q ss_pred CCeEEEEecCCCCCEEEEEeCC--CcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeC--CCcEEEEEC
Q 015438 270 SDVNTVCFGDESGHLIYSGSDD--NLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGK--DQAIKLWDI 345 (407)
Q Consensus 270 ~~v~~i~~s~~~~~~l~s~~~d--~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~--dg~i~iwd~ 345 (407)
+... ..++ |++.+|+-.... ..|..-++. +.....+.. ..+ ..|+|++.+|.-++. .+.|..-++
T Consensus 185 ~~~~-~~~~-P~g~~iy~t~~~~~~~I~~~~ld-----G~~~~~Lt~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~ 253 (302)
T 3s25_A 185 CNCY-KPVV-LDDTNVYYMDVNRDNAIVHVNIN-----NPNPVVLTE--ANI--EHYNVYGSLIFYQRGGDNPALCVVKN 253 (302)
T ss_dssp SCEE-EEEE-EETTEEEEEEGGGTTEEEEECSS-----SCCCEECSC--SCE--EEEEEETTEEEEEECSSSCEEEEEET
T ss_pred CCcc-ceee-ecCCEEEEEEcCCCcEEEEEECC-----CCCeEEEeC--CCc--ceEEECCCEEEEEECCCCcEEEEEEC
Confidence 2333 3355 455566555433 356666664 333344432 233 347788888876543 345555565
Q ss_pred CC
Q 015438 346 RK 347 (407)
Q Consensus 346 ~~ 347 (407)
.-
T Consensus 254 DG 255 (302)
T 3s25_A 254 DG 255 (302)
T ss_dssp TS
T ss_pred CC
Confidence 54
No 337
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.72 E-value=0.16 Score=45.18 Aligned_cols=71 Identities=13% Similarity=0.076 Sum_probs=38.2
Q ss_pred CCCEEEEEeC-CCeEEEEEcCC-CeEEeEeeecc-ccceEEEEEEECCCCCeEEEEeC-C---------CeEEEEECCCC
Q 015438 135 DGSLFVAGFQ-ASQIRIYDVER-GWKIQKDILAK-SLRWTVTDTSLSPDQRHLVYASM-S---------PIVHIVDVGSG 201 (407)
Q Consensus 135 ~~~~l~~~~~-dg~i~iwd~~~-~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~-d---------g~i~vwd~~~~ 201 (407)
++..++.|+. ...+.+||+.+ ........... ........+.+ ++++++.|+. + ..+.+||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 5666666654 35689999863 11122211111 11111222223 5777777775 2 46889999887
Q ss_pred ceeccc
Q 015438 202 TMESLA 207 (407)
Q Consensus 202 ~~~~~~ 207 (407)
+.....
T Consensus 97 ~W~~~~ 102 (357)
T 2uvk_A 97 SWVKLM 102 (357)
T ss_dssp EEEECS
T ss_pred cEEECC
Confidence 655443
No 338
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.43 E-value=0.87 Score=39.42 Aligned_cols=174 Identities=11% Similarity=0.041 Sum_probs=95.9
Q ss_pred ECCCCCEEEEEeC--CCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCC--------------CeEEE
Q 015438 132 FSADGSLFVAGFQ--ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS--------------PIVHI 195 (407)
Q Consensus 132 ~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d--------------g~i~v 195 (407)
|+.+|.+++.... ++.|...+.+... ...+.. -.+--+++++.+|+.+... ..|+.
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~-------~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~ 92 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSN-------DTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCR 92 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETTSCS-CEEEEE-------EEEEEEEECSSEEEEEEECC------CCSSCCSEEEEE
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCCCCC-CEEccC-------CceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEE
Confidence 3456777776642 5667777765432 222111 1123457889998887643 36777
Q ss_pred EECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEee----CCCeEEEEEcCCCeeeeeeeccCCC
Q 015438 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS----SDDCIYVYDLEANKLSLRILAHTSD 271 (407)
Q Consensus 196 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----~dg~i~i~d~~~~~~~~~~~~~~~~ 271 (407)
.++...+...+.. -....|+++++.|+... .+..|+..++.... ...+..+..
T Consensus 93 i~~dg~~~~~l~~---------------------~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~- 149 (302)
T 3s25_A 93 IKRNGHGSTVLDP---------------------DPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL- 149 (302)
T ss_dssp EETTSCCCEEEEC---------------------SCEEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC-
T ss_pred EeCCCCcceEeec---------------------CCccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc-
Confidence 7777665333221 11236788888888765 34567777776433 344444432
Q ss_pred eEEEEecCCCCCEEEEEeC-CCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCC--cEEEEECCCC
Q 015438 272 VNTVCFGDESGHLIYSGSD-DNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQ--AIKLWDIRKM 348 (407)
Q Consensus 272 v~~i~~s~~~~~~l~s~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg--~i~iwd~~~~ 348 (407)
..++ ++++.|+-.+. ...|.+.++. .+.....+. +... ..+.|++.+|+-...++ .|..-++...
T Consensus 150 ---~~~~-~~g~~iy~t~~g~~~Iy~~~l~----g~~~~~l~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~ 217 (302)
T 3s25_A 150 ---FTCN-TSDRYFYYNNPKNGQLYRYDTA----SQSEALFYD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNP 217 (302)
T ss_dssp ---CCSE-EETTEEEEECTTTCCEEEEETT----TTEEEEEEC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSC
T ss_pred ---eEee-EECCEEEEEeCCCceEEEEECC----CCCEEEEeC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCC
Confidence 3454 34555554443 5788888875 333222222 2222 34568888888665433 4555555543
No 339
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.86 E-value=1.1 Score=43.93 Aligned_cols=151 Identities=15% Similarity=0.198 Sum_probs=82.0
Q ss_pred CCCEEEEEeCC------CeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCC--eEEEEECCCCceecc
Q 015438 135 DGSLFVAGFQA------SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP--IVHIVDVGSGTMESL 206 (407)
Q Consensus 135 ~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg--~i~vwd~~~~~~~~~ 206 (407)
+++.++.|+.+ +.+.+||..+...... ......... .+++...+++.++.|+.++ .+.+||..+......
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~-~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~ 528 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMI-KSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDV 528 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEEC-CCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEEC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEEC-CCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEc
Confidence 67778887753 3588999887632211 111111111 1222224788888887654 689999988765444
Q ss_pred ccccccccceeeeecCCCCccccEEEEEEeCC-CCEEEEeeC--C-----CeEEEEEcCCCee-----eeeeec---c-C
Q 015438 207 ANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-GRELVAGSS--D-----DCIYVYDLEANKL-----SLRILA---H-T 269 (407)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~--d-----g~i~i~d~~~~~~-----~~~~~~---~-~ 269 (407)
........ ... .-.++.+..+ +++++.|+. + ..+.+||+.+.+. -..+.. . .
T Consensus 529 ~~~g~~p~-------~r~----~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R 597 (695)
T 2zwa_A 529 TPKDEFFQ-------NSL----VSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQR 597 (695)
T ss_dssp CCSSGGGG-------SCC----BSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCC
T ss_pred cCCCCCCC-------ccc----ceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCc
Confidence 32111000 011 1223455555 667777765 2 4699999987761 112211 1 1
Q ss_pred CCeEEEEecCCCCCEEEEEeC--------CCcEEEEeCc
Q 015438 270 SDVNTVCFGDESGHLIYSGSD--------DNLCKVWDRR 300 (407)
Q Consensus 270 ~~v~~i~~s~~~~~~l~s~~~--------d~~i~vwd~~ 300 (407)
.....+.+ .++.+++.|+. ...|.+||+.
T Consensus 598 ~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 598 YGSQIKYI--TPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp BSCEEEEE--ETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred ccceEEEe--CCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 12223333 33677777774 3468999987
No 340
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.62 E-value=3.9 Score=40.44 Aligned_cols=227 Identities=12% Similarity=0.081 Sum_probs=123.0
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCce
Q 015438 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM 203 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~ 203 (407)
...|.++....+|. |..|+.+| +..||..+..-.. . .......|.++.. .++ .|..++.+ -|..+|..+++.
T Consensus 62 ~~~i~~i~~d~~g~-lWigT~~G-l~~yd~~~~~f~~-~--~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~ 133 (758)
T 3ott_A 62 NTRIYCGVIIDNTY-LYMGTDNG-ILVYNYRADRYEQ-P--ETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKL 133 (758)
T ss_dssp SSCEEEEEEETTTE-EEEEETTE-EEEEETTTTEECC-C--SCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCE
T ss_pred CceEEEEEEcCCCc-EEEEeCCC-eEEEeCCCCEEEC-c--ccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeE
Confidence 45688888887775 44555554 8899987753211 1 1111224666654 345 45556655 588899876654
Q ss_pred eccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeee-eec----cCCCeEEEEec
Q 015438 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLR-ILA----HTSDVNTVCFG 278 (407)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~----~~~~v~~i~~s 278 (407)
........ . -....|.++....+|.+.+ |+.+| +..+|..+++.... ... ....|.++...
T Consensus 134 ~~~~~~~~---~---------l~~~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d 199 (758)
T 3ott_A 134 TSFDTRRN---G---------LPNNTIYSIIRTKDNQIYV-GTYNG-LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLED 199 (758)
T ss_dssp EEECHHHH---C---------CSCSCEEEEEECTTCCEEE-EETTE-EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEE
T ss_pred EEeccCCC---C---------cCCCeEEEEEEcCCCCEEE-EeCCC-HhhCccCCCceEEecCCCccccccceeEEEEEE
Confidence 32211000 0 0112588888887887544 55554 88899877654221 111 12247788774
Q ss_pred CCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeec-cccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccccCC
Q 015438 279 DESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLM-GHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLG 357 (407)
Q Consensus 279 ~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 357 (407)
.++..|..|+. +-+..+|.. ..+. ..+. -....|.++....+|.+.+. +. +-+.+++..+.+........
T Consensus 200 -~~~~~lWigt~-~Gl~~~~~~----~~~~-~~~~~l~~~~i~~i~~d~~g~lWig-T~-~Gl~~~~~~~~~~~~~~~~~ 270 (758)
T 3ott_A 200 -TTRQCVWIGTE-GYLFQYFPS----TGQI-KQTEAFHNNSIKSLALDGNGDLLAG-TD-NGLYVYHNDTTPLQHIIHDS 270 (758)
T ss_dssp -TTTTEEEEEEE-EEEEEEETT----TTEE-EEEEEEEEEEEEEEEECTTCCEEEE-ET-TEEEEECCTTSCCEEECCCT
T ss_pred -CCCCEEEEEEC-CCCeEEcCC----CCeE-EeccCCCCCeEEEEEEcCCCCEEEE-eC-CceeEEecCCCcEEEEEcCC
Confidence 55665555554 457888875 3322 1111 12345888888888876554 44 45888887664321110000
Q ss_pred ---CccccccceeeeCCCCCCccCCCC
Q 015438 358 ---FRSYEWDYRWMDYPPQARDLKHPC 381 (407)
Q Consensus 358 ---~~~~~~~v~~~~~~~~~~~l~~~~ 381 (407)
..-..-.|.++....++.++....
T Consensus 271 ~~~~~l~~~~i~~i~~D~~g~lWiGT~ 297 (758)
T 3ott_A 271 RNIQSLTNNIIWNIFADQEHNIWLGTD 297 (758)
T ss_dssp TCTTSCSCSCEEEEEECTTCCEEEEES
T ss_pred CCcCcCCcCeEEEEEEcCCCCEEEEeC
Confidence 011122355565666666665443
No 341
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.42 E-value=2.3 Score=37.02 Aligned_cols=205 Identities=7% Similarity=0.022 Sum_probs=124.6
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeecc--ccceEEEEEEECCCCCeEEEEeC-------CCeEE
Q 015438 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK--SLRWTVTDTSLSPDQRHLVYASM-------SPIVH 194 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~-------dg~i~ 194 (407)
..+|.--+|-.+.. |+-.+ +..|+-|+++......+..... -....|..-..+++.++++..+- .|.+.
T Consensus 106 ~e~VvfWkWis~~~-L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQ 183 (365)
T 2xzh_A 106 TDDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQ 183 (365)
T ss_dssp SSCEEEEEECSSSE-EEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEE
T ss_pred CCccEEEEecCCCe-EEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEE
Confidence 56777778876554 44443 4689999997532222222111 12456888888999998876542 36788
Q ss_pred EEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCC---CCEEEEeeC---CCeEEEEEcCCC---ee----
Q 015438 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD---GRELVAGSS---DDCIYVYDLEAN---KL---- 261 (407)
Q Consensus 195 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~---dg~i~i~d~~~~---~~---- 261 (407)
+|..+.+....+. ||......+....+ ..+++.+.. .+.+++.++... ..
T Consensus 184 LYS~er~~sQ~ie-----------------Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~k 246 (365)
T 2xzh_A 184 LYSVDRKVSQPIE-----------------GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPK 246 (365)
T ss_dssp EEETTTTEEEEEC-----------------CSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCC
T ss_pred EEeecccccceee-----------------eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCccc
Confidence 8888766433222 22222211111110 012222222 257888888432 11
Q ss_pred --eeeee---ccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeC
Q 015438 262 --SLRIL---AHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGK 336 (407)
Q Consensus 262 --~~~~~---~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~ 336 (407)
+..+. ...+-..++..+ +...+++.-+.-|.|++||+. ++.++..-+--...|...+-+.+..-++....
T Consensus 247 k~vdi~fppea~~DFPVamqvs-~kygviyviTK~G~ihlyDle----Tgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr 321 (365)
T 2xzh_A 247 KAVDVFFPPEAQNDFPVAMQIS-EKHDVVFLITKYGYIHLYDLE----TGTCIYMNRISGETIFVTAPHEATAGIIGVNR 321 (365)
T ss_dssp EEEEECCCTTCTTCCEEEEEEE-TTTTEEEEEETTSEEEEEETT----TCCEEEEEECCSSCEEEEEEEGGGTEEEEEET
T ss_pred ccceeeCCccccCCceEEEEec-ccCCEEEEEeCCcEEEEEEcc----cCcEEEEeccCCCceEEecccCCCCcEEEEcC
Confidence 11111 123445678888 556688888999999999998 89998887767777766666555556777778
Q ss_pred CCcEEEEECCCCCCcc
Q 015438 337 DQAIKLWDIRKMSSNA 352 (407)
Q Consensus 337 dg~i~iwd~~~~~~~~ 352 (407)
.|.|.--.++....+.
T Consensus 322 ~GqVl~v~v~~~~ivp 337 (365)
T 2xzh_A 322 KGQVLSVCVEEENIIP 337 (365)
T ss_dssp TCEEEEEEECTTTHHH
T ss_pred CCEEEEEEECcccEeh
Confidence 8988888887765544
No 342
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.38 E-value=5.7 Score=41.38 Aligned_cols=76 Identities=12% Similarity=0.103 Sum_probs=49.9
Q ss_pred CCCceEEEEECCC------CCEEEEEeC-CCeEEEEEcCCCeEEeEeeecc-ccceEEEEEEECCCCCeEEEEeCCCeEE
Q 015438 123 TTSRAYVSQFSAD------GSLFVAGFQ-ASQIRIYDVERGWKIQKDILAK-SLRWTVTDTSLSPDQRHLVYASMSPIVH 194 (407)
Q Consensus 123 h~~~v~~~~~s~~------~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~dg~i~ 194 (407)
....|.|+++.|. ++++|+|.. |++|+|+++.+-..+....... .....|.-+.+ ....+|..|-.||.+.
T Consensus 552 l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~-~~~~~L~igl~dG~l~ 630 (1158)
T 3ei3_A 552 MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTF-ESSHYLLCALGDGALF 630 (1158)
T ss_dssp CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEE-TTEEEEEEEETTSEEE
T ss_pred CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEe-CCCcEEEEEeCCCeEE
Confidence 3568999999864 368999996 9999999998755443322211 11222333344 2345788888999886
Q ss_pred EEECC
Q 015438 195 IVDVG 199 (407)
Q Consensus 195 vwd~~ 199 (407)
-+.+.
T Consensus 631 ~~~~d 635 (1158)
T 3ei3_A 631 YFGLN 635 (1158)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 66554
No 343
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=93.70 E-value=4 Score=37.12 Aligned_cols=206 Identities=7% Similarity=0.029 Sum_probs=126.8
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeec--cccceEEEEEEECCCCCeEEEEeC-------CCeEE
Q 015438 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILA--KSLRWTVTDTSLSPDQRHLVYASM-------SPIVH 194 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~v~~~~~sp~~~~l~~~~~-------dg~i~ 194 (407)
..+|.--.|-.+. .|+-.+ +..|+-|+++......+.... .-....|..-..+++.++++..+- .|.+.
T Consensus 105 ~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQ 182 (494)
T 1bpo_A 105 TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQ 182 (494)
T ss_dssp SSCCCEEEEEETT-EEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEE
T ss_pred CCCceEEEecCCC-eEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEE
Confidence 4566666676544 444443 468999999753222222211 112456888888999998886442 36788
Q ss_pred EEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCC---CEEEEeeC---CCeEEEEEcCCC---e-----
Q 015438 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG---RELVAGSS---DDCIYVYDLEAN---K----- 260 (407)
Q Consensus 195 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~---dg~i~i~d~~~~---~----- 260 (407)
+|..+.+....+. ||......+....+. .+++.+.. .+.++|.++... .
T Consensus 183 LYS~er~~sQ~ie-----------------Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~k 245 (494)
T 1bpo_A 183 LYSVDRKVSQPIE-----------------GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPK 245 (494)
T ss_dssp EEESTTCCEEEEC-----------------CSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCC
T ss_pred Eeeccccccchhe-----------------eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccc
Confidence 8888766543322 233222222221111 12333322 368999988543 1
Q ss_pred eeee-ee---ccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeC
Q 015438 261 LSLR-IL---AHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGK 336 (407)
Q Consensus 261 ~~~~-~~---~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~ 336 (407)
.... +. ...+-..++..+ +...+++.-+.-|.|++||+. ++.++..-+-....|...+-+....-++....
T Consensus 246 k~vdv~fppe~~~DFPvamqvs-~kygviyviTK~G~i~lyDle----Tgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr 320 (494)
T 1bpo_A 246 KAVDVFFPPEAQNDFPVAMQIS-EKHDVVFLITKYGYIHLYDLE----TGTCIYMNRISGETIFVTAPHEATAGIIGVNR 320 (494)
T ss_dssp EEEECCCCTTSTTCCEEEEEEE-TTTTEEEEEETTSEEEEEETT----TCCEEEEEECCSSCEEEEEEETTTTEEEEEET
T ss_pred eeeeeeCCcccccCceeEEEec-ccCCEEEEEecCceEEEEecc----cceeeeeecccCCceEEecccCCCCcEEEEcc
Confidence 1111 11 123345678888 556688888999999999998 89998887767777776666666667777778
Q ss_pred CCcEEEEECCCCCCccc
Q 015438 337 DQAIKLWDIRKMSSNAS 353 (407)
Q Consensus 337 dg~i~iwd~~~~~~~~~ 353 (407)
.|.|.--.++....+..
T Consensus 321 ~GqVl~v~v~e~~ivpy 337 (494)
T 1bpo_A 321 KGQVLSVCVEEENIIPY 337 (494)
T ss_dssp TCEEEEEEECTTTHHHH
T ss_pred CceEEEEEEccccchhh
Confidence 99988888887655443
No 344
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.61 E-value=1.9 Score=45.33 Aligned_cols=172 Identities=9% Similarity=0.138 Sum_probs=103.2
Q ss_pred CCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCC
Q 015438 145 ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDG 224 (407)
Q Consensus 145 dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (407)
..+|.|.|+.++..+... ... --+.-.+|..+.+|.=. ..++.|+|+++........+..
T Consensus 47 ~~~vvIidl~~~~~~~rr--pi~----AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e------------- 106 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRR--PIS----ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD------------- 106 (1630)
T ss_pred CceEEEEECCCCCCcccc--ccc----chhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCC-------------
Confidence 447999999886433211 111 22345688887776654 6789999999877655544332
Q ss_pred CccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCC-eeeeeeecc----CCCeEEEEecCCCCCEEEEEe-------CCC
Q 015438 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN-KLSLRILAH----TSDVNTVCFGDESGHLIYSGS-------DDN 292 (407)
Q Consensus 225 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~----~~~v~~i~~s~~~~~~l~s~~-------~d~ 292 (407)
.|.--.|-... .|+..+ +..|+.|++... .+++.+..| ...|..-..+ ++.++++..| -.|
T Consensus 107 ----~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d-~~~kW~~l~gi~~~~~~v~G 179 (1630)
T 1xi4_A 107 ----DVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTD-AKQKWLLLTGISAQQNRVVG 179 (1630)
T ss_pred ----CceEEEecCCC-eeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeC-CCCCeEEEEeeccCCCcccc
Confidence 45556676443 455554 457999999743 344444333 3456666665 6666665443 347
Q ss_pred cEEEEeCcccCCCCceeeeeccccCCeEEEEec--C-CCCEEEEEeC---CCcEEEEECCCC
Q 015438 293 LCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSR--G-DGRYLISNGK---DQAIKLWDIRKM 348 (407)
Q Consensus 293 ~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s--~-~~~~l~s~~~---dg~i~iwd~~~~ 348 (407)
.+.+|... .+..+.+.||...-..+... + ....++.+.. .+.+.|-++...
T Consensus 180 ~mQLyS~e-----r~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~ 236 (1630)
T 1xi4_A 180 AMQLYSVD-----RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTP 236 (1630)
T ss_pred eeeeeecc-----cccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCC
Confidence 89999884 55666778886654444332 1 2233443332 378999998653
No 345
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=93.31 E-value=3.4 Score=35.19 Aligned_cols=186 Identities=12% Similarity=0.023 Sum_probs=98.3
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCceec
Q 015438 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMES 205 (407)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~ 205 (407)
.|..++....-. ++. . ||.|..|-....-.+.... .....|..++...+ ..++-. +|.|+.|-........
T Consensus 64 ~i~~ia~G~~hs-~~l-~-~G~v~~wG~n~~Gqlg~P~---~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg 134 (282)
T 3qhy_B 64 GVDAIAAGNYHS-LAL-K-DGEVIAWGGNEDGQTTVPA---EARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTT 134 (282)
T ss_dssp CCCEEEECSSEE-EEE-E-TTEEEEEECCTTSTTCCCG---GGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTS
T ss_pred CEEEEEeCCCEE-EEE-E-CCEEEEeeCCCCCCCCCCc---ccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCC
Confidence 566666654432 333 4 8999999765421111111 11224766665443 333334 8999999765432211
Q ss_pred cccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEE
Q 015438 206 LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLI 285 (407)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l 285 (407)
... . ....|..++...+.. ++ -. ||.|+.|-......+..-......|..|+.. ....+
T Consensus 135 ~~~-~---------------~~~~i~~i~~G~~~~-~~-l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G--~~hs~ 193 (282)
T 3qhy_B 135 VPA-E---------------AQSGVTALDGGVYTA-LA-VK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGG--IFHSL 193 (282)
T ss_dssp CCG-G---------------GGSSEEEEEECSSEE-EE-EE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEEC--SSEEE
T ss_pred CCc-c---------------CCCCeEEEEcccCEE-EE-EE-CCEEEEecCCCCCCCCCceecCCCeEEEEec--CCEEE
Confidence 110 0 112466666654332 22 33 7999999765432221111123567788774 34444
Q ss_pred EEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCC
Q 015438 286 YSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSS 350 (407)
Q Consensus 286 ~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 350 (407)
+. .||.|..|-......-+.+. .....|..++...... ++.. ||.|..|=.+...+
T Consensus 194 al--~~G~v~~wG~n~~gqlg~p~----~~~~~v~~i~~G~~h~-~al~--~g~v~~wG~n~~gq 249 (282)
T 3qhy_B 194 AL--KDGKVIAWGDNRYKQTTVPT----EALSGVSAIASGEWYS-LALK--NGKVIAWGSSRTAP 249 (282)
T ss_dssp EE--ETTEEEEEECCTTSTTCCCG----GGGSSCCEEEECSSCE-EEEE--TTEEEEESTTCCCC
T ss_pred EE--ECCeEEEEECCCCCCCCCCc----ccCCCceEEEcCCCEE-EEEE--CCEEEEecCCCCcc
Confidence 44 59999999876321112221 1234577777654433 3333 99999998776544
No 346
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.00 E-value=13 Score=36.66 Aligned_cols=238 Identities=8% Similarity=-0.050 Sum_probs=126.5
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCceec
Q 015438 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMES 205 (407)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~ 205 (407)
.|.++...+++..|..|.. +-+..++..++... ..... ....|.++....++.+.+ |+.+ -+.+++..++....
T Consensus 192 ~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~-~~~~l--~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~~~~~~~ 265 (758)
T 3ott_A 192 FVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIK-QTEAF--HNNSIKSLALDGNGDLLA-GTDN-GLYVYHNDTTPLQH 265 (758)
T ss_dssp CEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEE-EEEEE--EEEEEEEEEECTTCCEEE-EETT-EEEEECCTTSCCEE
T ss_pred eeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEE-eccCC--CCCeEEEEEEcCCCCEEE-EeCC-ceeEEecCCCcEEE
Confidence 4888888887775555554 45888998776322 11111 123588888877776555 4444 47888877654332
Q ss_pred cccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeee-------ccCCCeEEEEec
Q 015438 206 LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL-------AHTSDVNTVCFG 278 (407)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------~~~~~v~~i~~s 278 (407)
........ ..-....|.++....+|. |-+|+..| +.++... .. ...+. .....|.++.-.
T Consensus 266 ~~~~~~~~---------~~l~~~~i~~i~~D~~g~-lWiGT~~G-l~~~~~~-~~-~~~~~~~~~~~~~~~~~v~~i~~D 332 (758)
T 3ott_A 266 IIHDSRNI---------QSLTNNIIWNIFADQEHN-IWLGTDYG-ISLSRYN-SA-LQFIPISQITGTGDGNQFYSLFRD 332 (758)
T ss_dssp ECCCTTCT---------TSCSCSCEEEEEECTTCC-EEEEESSS-EEEECCC-C--CEEEEHHHHSCSCCCCBEEEEEEC
T ss_pred EEcCCCCc---------CcCCcCeEEEEEEcCCCC-EEEEeCCc-ccccccC-Cc-eeEEecccCCCCCCCceEEEEEEc
Confidence 21110000 001123588998888886 45566667 5554332 11 11111 113457888774
Q ss_pred CCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeec-------cccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCc
Q 015438 279 DESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLM-------GHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSN 351 (407)
Q Consensus 279 ~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~-------~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 351 (407)
.++++. .|+.+| +..++.... .......+. -....|.++.-..+|+..+ |+ ++-|..||..+.+..
T Consensus 333 -~~g~lW-iGt~~G-l~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWi-gt-~~GL~~~~~~~~~~~ 405 (758)
T 3ott_A 333 -SKGFYW-FGGANG-LIRFTDPAG--ERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWI-AT-DGSINRYDYATRQFI 405 (758)
T ss_dssp -TTCCEE-EEETTE-EEEESCTTS--SCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEE-EE-TTEEEEEETTTTEEE
T ss_pred -CCCCEE-EeeCCc-ceeeccccc--ccceeEEeccCCcCCCCCCCceEEEEECCCCCEEE-Ee-CCcHhhcCcCCCcEE
Confidence 667655 445554 666665411 001111111 0123588888888887554 44 457999998765332
Q ss_pred cccc-CCCc-cccccceeeeCCCCCCccCCCCCcceEEEe
Q 015438 352 ASCN-LGFR-SYEWDYRWMDYPPQARDLKHPCDQSVATYK 389 (407)
Q Consensus 352 ~~~~-~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~v~~~~ 389 (407)
.... .... .....+.++....+++++....++-+..|+
T Consensus 406 ~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~ 445 (758)
T 3ott_A 406 HYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVD 445 (758)
T ss_dssp EEEEECCC--CBSSSEEEEEECTTSEEEEEESSSCEEEEE
T ss_pred EeecCCCcCCCCCceEEEEEEcCCCCEEEEECCCceEEEc
Confidence 1100 0000 012235566667778877665444455554
No 347
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=87.84 E-value=1.9 Score=37.86 Aligned_cols=113 Identities=8% Similarity=-0.027 Sum_probs=68.2
Q ss_pred CEEEEeeCCCeEEEEEcCCCeeeeeeecc-CCCeEEEEec--CCCCCEEEEE-eCCCcEEEEeCcccCCCCceeeeecc-
Q 015438 240 RELVAGSSDDCIYVYDLEANKLSLRILAH-TSDVNTVCFG--DESGHLIYSG-SDDNLCKVWDRRCLNVKGKPAGVLMG- 314 (407)
Q Consensus 240 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~v~~i~~s--~~~~~~l~s~-~~d~~i~vwd~~~~~~~~~~~~~~~~- 314 (407)
..+++++.||.|+-+|..+|+.+-++... ..++....-. +.++..++.. +.||.|..+|.. .+.....+..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~----~G~~~~~~~~~ 86 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAH----QGLQKLPLSIR 86 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETT----TEEEEEEEEHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECC----CCcEEeeeccc
Confidence 37888999999999999999987776543 1232221110 0122334333 589999999986 5533322211
Q ss_pred ---ccCCeEE---EEe-c----CCCCEEEEEeCCCcEEEEECCCCCCcccccC
Q 015438 315 ---HLEGITF---IDS-R----GDGRYLISNGKDQAIKLWDIRKMSSNASCNL 356 (407)
Q Consensus 315 ---~~~~i~~---~~~-s----~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 356 (407)
...++.. ... . ..+..+++|+.+|.+...|+++++.+..+..
T Consensus 87 ~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 87 QLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp HHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred cceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 1112221 000 0 1355788999999999999999888776643
No 348
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=87.81 E-value=17 Score=33.51 Aligned_cols=55 Identities=13% Similarity=0.074 Sum_probs=33.9
Q ss_pred ceEEEEECCCCC-EEEEEeCCCeEEEEEcCCCe---EEeEee--ecc----ccceEEEEEEECCC
Q 015438 126 RAYVSQFSADGS-LFVAGFQASQIRIYDVERGW---KIQKDI--LAK----SLRWTVTDTSLSPD 180 (407)
Q Consensus 126 ~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~---~~~~~~--~~~----~~~~~v~~~~~sp~ 180 (407)
..+.|+|.|+|. .|+++...|.|++++..... .+..+. ... ........|+|+|+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 457899999996 45556688999999754321 111110 111 11345789999996
No 349
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=87.68 E-value=5.4 Score=37.49 Aligned_cols=114 Identities=12% Similarity=0.150 Sum_probs=64.6
Q ss_pred EEEEEECCCCCeEEEEe-CCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCe
Q 015438 172 VTDTSLSPDQRHLVYAS-MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDC 250 (407)
Q Consensus 172 v~~~~~sp~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 250 (407)
...+..+|||+++++++ .+.++.|+|++.-...-.-.+....+.+.-.. .-.......+|.++|....+-.-|..
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~----e~GlGPlHt~Fd~~G~aYTtlfidSq 400 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP----ELGLGPLHTTFDGRGNAYTTLFIDSQ 400 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC----BCCSCEEEEEECSSSEEEEEETTTTE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeec----cCCCcccEEEECCCCceEeeeeecce
Confidence 45678899999998865 67899999987421100000000000000000 01125677899999955555568999
Q ss_pred EEEEEcCCC----------eeeeeeeccCCCeEEEEe----cCCCCCEEEEEe
Q 015438 251 IYVYDLEAN----------KLSLRILAHTSDVNTVCF----GDESGHLIYSGS 289 (407)
Q Consensus 251 i~i~d~~~~----------~~~~~~~~~~~~v~~i~~----s~~~~~~l~s~~ 289 (407)
|..|++... ..+.++..|-.+-.-.+- ..++|++|++..
T Consensus 401 vvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 401 VVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred EEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 999999753 344555544333222110 136778887764
No 350
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=86.87 E-value=16 Score=32.47 Aligned_cols=207 Identities=13% Similarity=0.198 Sum_probs=110.3
Q ss_pred CceEEEEECCCCCEEEE--Ee-------------CCCeEEEEEcCCC--eEEeEeeeccc---cceEEEEEEEC---CC-
Q 015438 125 SRAYVSQFSADGSLFVA--GF-------------QASQIRIYDVERG--WKIQKDILAKS---LRWTVTDTSLS---PD- 180 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~~--~~-------------~dg~i~iwd~~~~--~~~~~~~~~~~---~~~~v~~~~~s---p~- 180 (407)
-.|..+...+.+++-+. |- ..-.|.+||+.++ +.++....... ....+..+.+. |+
T Consensus 87 vsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~ 166 (381)
T 3q6k_A 87 TSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKG 166 (381)
T ss_dssp SCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTT
T ss_pred EEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCC
Confidence 35667777776664332 11 1125888999988 66655443211 13347777776 22
Q ss_pred ---CCeEEEE-eCCCeEEEEECCCCceecccccccccc-ceeeeecCCCCc----cccEEEEEEeCC----CCEEEEeeC
Q 015438 181 ---QRHLVYA-SMSPIVHIVDVGSGTMESLANVTEIHD-GLDFSAADDGGY----SFGIFSLKFSTD----GRELVAGSS 247 (407)
Q Consensus 181 ---~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~v~~~~~s~~----~~~l~~~~~ 247 (407)
+.++..+ +..+-|.|+|+.+++.-.+.......+ ...+.. .|. ...|..|+.+|+ ++.|+...-
T Consensus 167 ~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i---~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pl 243 (381)
T 3q6k_A 167 DCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDY---GGKEYEFKAGIFGITLGDRDSEGNRPAYYLAG 243 (381)
T ss_dssp TSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEE---TTEEEEECCCEEEEEECCCCTTSCCEEEEEES
T ss_pred CCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEE---CCEEeEeccCceEEEecCCcCCCCeEEEEEEC
Confidence 3344333 346789999999887655443111111 111111 111 237899999998 777777665
Q ss_pred CC-eEEEEE---cCCC---eeeeeeeccC---CCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeec--cc
Q 015438 248 DD-CIYVYD---LEAN---KLSLRILAHT---SDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLM--GH 315 (407)
Q Consensus 248 dg-~i~i~d---~~~~---~~~~~~~~~~---~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~--~~ 315 (407)
.+ .++--. ++.. ..+..+ +.. ..-..+++.+.+|.++++--..+.|..|+.............+. ..
T Consensus 244 ss~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~ 322 (381)
T 3q6k_A 244 SAIKVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSR 322 (381)
T ss_dssp SCSEEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTT
T ss_pred CCCcEEEEEHHHhhCcchhhceEEe-eecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCC
Confidence 54 333332 1221 112222 223 23334566446788888878889999999862000011122221 12
Q ss_pred cCCeEEEEecCCCCEEEEEe
Q 015438 316 LEGITFIDSRGDGRYLISNG 335 (407)
Q Consensus 316 ~~~i~~~~~s~~~~~l~s~~ 335 (407)
-..+..+.+.++|.+.+.++
T Consensus 323 l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 323 FVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp CCSEEEEEECTTSCEEEEEC
T ss_pred ccccCeEEECCCCeEEEEEC
Confidence 23467777777776555554
No 351
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=86.15 E-value=9.9 Score=35.01 Aligned_cols=110 Identities=15% Similarity=0.037 Sum_probs=60.8
Q ss_pred cEEEEEEeCCCC-EEEEeeCCCeEEEEEcCCCe---eeeeee---c------cCCCeEEEEecCC---CCCEEEEEeC--
Q 015438 229 GIFSLKFSTDGR-ELVAGSSDDCIYVYDLEANK---LSLRIL---A------HTSDVNTVCFGDE---SGHLIYSGSD-- 290 (407)
Q Consensus 229 ~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~---~~~~~~---~------~~~~v~~i~~s~~---~~~~l~s~~~-- 290 (407)
....|+|.|+|. .|+++...|.|++++..... .+..+. . .......|+++|. ++.+.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 457899999996 56667788999999754321 222211 1 1456788999843 3444444332
Q ss_pred C----------CcEEEEeCcccC------CCCceeeeec--cccCCeEEEEecCCCCEEEEEeCCC
Q 015438 291 D----------NLCKVWDRRCLN------VKGKPAGVLM--GHLEGITFIDSRGDGRYLISNGKDQ 338 (407)
Q Consensus 291 d----------~~i~vwd~~~~~------~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~s~~~dg 338 (407)
+ ..|.-|.+.... ...+.+..+. ........|+|.|||.+.++.+..+
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 133335443110 0112222222 1112357899999998877776543
No 352
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=84.65 E-value=19 Score=31.10 Aligned_cols=205 Identities=10% Similarity=0.017 Sum_probs=112.9
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCeEE------eEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCceec-c
Q 015438 134 ADGSLFVAGFQASQIRIYDVERGWKI------QKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMES-L 206 (407)
Q Consensus 134 ~~~~~l~~~~~dg~i~iwd~~~~~~~------~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~-~ 206 (407)
++..++++.+.+|.|+--.+..-... ..-...... ..+..+........++..+..|.++-+....-.... .
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~-D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDG-DEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTT-CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCC-CEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 46677889999999998876432111 001111222 234444444455667777888887776653211000 0
Q ss_pred ccccccccceeeeecCCCCccccEEEEEEeC---CCCEEEEeeCCCeEEEEEcCC-------CeeeeeeeccCCCeEEEE
Q 015438 207 ANVTEIHDGLDFSAADDGGYSFGIFSLKFST---DGRELVAGSSDDCIYVYDLEA-------NKLSLRILAHTSDVNTVC 276 (407)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~v~~i~ 276 (407)
..-......+.+. ....|..+...+ +..+|+..+.+|.++...+.. +.....+.. .+.+..+.
T Consensus 85 ~~G~~i~~~l~l~------~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~ 157 (312)
T 1suu_A 85 SKGQNISELINLG------DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAE 157 (312)
T ss_dssp ---CBGGGTSCCC------TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEE
T ss_pred CCCcChhhccCCC------CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEE
Confidence 0000000011111 111344443332 456788889999999988743 222333433 45666666
Q ss_pred ecCCCCCEEEEEeCCCcEEEEeCcccCC-----CCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 015438 277 FGDESGHLIYSGSDDNLCKVWDRRCLNV-----KGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKM 348 (407)
Q Consensus 277 ~s~~~~~~l~s~~~d~~i~vwd~~~~~~-----~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 348 (407)
.. .....++..+.+|.+..+....... .+.....+.. ...|.++..-.++..|++.+..|..+..++...
T Consensus 158 ~~-~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~ 232 (312)
T 1suu_A 158 IV-FKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMSKI 232 (312)
T ss_dssp EE-CTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGGGS
T ss_pred Ee-CCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHHHh
Confidence 65 4455677888999999888753211 2222333332 345666655556677889999999999998764
No 353
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=83.94 E-value=21 Score=36.33 Aligned_cols=74 Identities=18% Similarity=0.091 Sum_probs=48.3
Q ss_pred cccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeecc-----CCCeEEEEecCCCCCEEEEE---eCCCcEEEEe
Q 015438 227 SFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH-----TSDVNTVCFGDESGHLIYSG---SDDNLCKVWD 298 (407)
Q Consensus 227 ~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----~~~v~~i~~s~~~~~~l~s~---~~d~~i~vwd 298 (407)
...+.++...++..++++-+.|+++++|++.+++++...... ..........|..+.++.+- ..+|..++|.
T Consensus 235 ~~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~~~~~~~~~~~~~~~~~~~~~~i~v~~s~~~~g~F~~~~ 314 (950)
T 4gq2_M 235 PNTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQTILPLQSFPYLTSDHTTNSFIALYYPDNSHGSFSIYK 314 (950)
T ss_dssp TTCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECCCCCCCSCCCCCEEECSSSTTEEEEEECCSSSCEEEEEE
T ss_pred cceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecccccCCccccccccccCCCcccEEEEEEcCCCCcEEEEEE
Confidence 346778888888889999999999999999999988764311 11112223333444444332 2356777776
Q ss_pred Cc
Q 015438 299 RR 300 (407)
Q Consensus 299 ~~ 300 (407)
+.
T Consensus 315 ~~ 316 (950)
T 4gq2_M 315 LN 316 (950)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 354
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=83.68 E-value=19 Score=30.45 Aligned_cols=187 Identities=8% Similarity=-0.034 Sum_probs=98.3
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCceec
Q 015438 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMES 205 (407)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~ 205 (407)
.|..++....- .++. . ||.|..|-......+... ......|..++-..... ++. . ||.|+.|-........
T Consensus 25 ~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg~p---~~~~~~i~~ia~G~~hs-~~l-~-~G~v~~wG~n~~Gqlg 95 (282)
T 3qhy_B 25 GVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLTMP---AATQSGVDAIAAGNYHS-LAL-K-DGEVIAWGGNEDGQTT 95 (282)
T ss_dssp SCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTSCC---GGGGSCCCEEEECSSEE-EEE-E-TTEEEEEECCTTSTTC
T ss_pred CCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCCCC---ccCCCCEEEEEeCCCEE-EEE-E-CCEEEEeeCCCCCCCC
Confidence 46666655432 2333 4 899999975542111111 11122466666544333 333 4 8999999866432211
Q ss_pred cccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeeccCCCeEEEEecCCCCCEE
Q 015438 206 LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLI 285 (407)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l 285 (407)
.... -...|..++...+. .+.-. +|.|+.|-....-.+-.-......|..|+.. ....+
T Consensus 96 ~P~~----------------~~~~v~~ia~G~~h--s~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G--~~~~~ 154 (282)
T 3qhy_B 96 VPAE----------------ARSGVDAIAAGAWA--SYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGG--VYTAL 154 (282)
T ss_dssp CCGG----------------GSSSEEEEEEETTE--EEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEEC--SSEEE
T ss_pred CCcc----------------cCCCeEEEECcCCE--EEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcc--cCEEE
Confidence 1000 01157777776443 33344 8999999765422211111233567777764 33333
Q ss_pred EEEeCCCcEEEEeCcccCCCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCc
Q 015438 286 YSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSN 351 (407)
Q Consensus 286 ~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 351 (407)
+. . ||.|..|-......-+. .......|..++...+. .++. .||.|..|=....-++
T Consensus 155 ~l-~-~G~v~~wG~n~~gqlg~----p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gql 211 (282)
T 3qhy_B 155 AV-K-NGGVIAWGDNYFGQTTV----PAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQT 211 (282)
T ss_dssp EE-E-TTEEEEEECCTTSTTSC----CGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTT
T ss_pred EE-E-CCEEEEecCCCCCCCCC----ceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCC
Confidence 33 3 79999998763211111 11123568888765433 3333 5999999987765443
No 355
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=81.32 E-value=33 Score=34.89 Aligned_cols=39 Identities=13% Similarity=0.176 Sum_probs=32.3
Q ss_pred EEEEEEECCCCCeEEEEeCCCeEEEEECCCCceeccccc
Q 015438 171 TVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANV 209 (407)
Q Consensus 171 ~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 209 (407)
.+.++...++..++++-+.|+++++|++.++++.....+
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 467777778888999999999999999999987665443
No 356
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=79.91 E-value=32 Score=30.51 Aligned_cols=109 Identities=10% Similarity=-0.005 Sum_probs=54.8
Q ss_pred cEEEEEEeCC--CCEEEEeeCCCeEEEEEcC--CCeeeeeeec----------------cCCCeEEEEecCCCCCEEEEE
Q 015438 229 GIFSLKFSTD--GRELVAGSSDDCIYVYDLE--ANKLSLRILA----------------HTSDVNTVCFGDESGHLIYSG 288 (407)
Q Consensus 229 ~v~~~~~s~~--~~~l~~~~~dg~i~i~d~~--~~~~~~~~~~----------------~~~~v~~i~~s~~~~~~l~s~ 288 (407)
.|.++++.|. ...|.+++..+.|+..+-. +.+.+..+.. ....+.+|.+.|.+.+.++.+
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg 195 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIG 195 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEE
Confidence 5788999872 4566666666666655422 1222211100 123578899975454445555
Q ss_pred eCCCcEEEEeCcccCCCCceeeeecc-----c--------cCCeEEEEecCC-CCEEEEEeCCCcEEEE
Q 015438 289 SDDNLCKVWDRRCLNVKGKPAGVLMG-----H--------LEGITFIDSRGD-GRYLISNGKDQAIKLW 343 (407)
Q Consensus 289 ~~d~~i~vwd~~~~~~~~~~~~~~~~-----~--------~~~i~~~~~s~~-~~~l~s~~~dg~i~iw 343 (407)
..++.|...+- .++.-..+.. + ...+.++.++|+ ...|..++..+ |...
T Consensus 196 ~~~ggl~~s~D-----gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s 258 (394)
T 3b7f_A 196 MSSGGVFESTD-----AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRM 258 (394)
T ss_dssp EETBEEEEESS-----TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEE
T ss_pred ECCCCEEEECC-----CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEe
Confidence 44444443322 1111111110 0 124888999885 35566666444 4433
No 357
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=79.81 E-value=30 Score=30.07 Aligned_cols=168 Identities=11% Similarity=0.074 Sum_probs=91.8
Q ss_pred CceEEE-EECC--CCCEEEEEeCCCeEEEEEcCCCeEE----eEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEE
Q 015438 125 SRAYVS-QFSA--DGSLFVAGFQASQIRIYDVERGWKI----QKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVD 197 (407)
Q Consensus 125 ~~v~~~-~~s~--~~~~l~~~~~dg~i~iwd~~~~~~~----~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd 197 (407)
..|.++ .... +..+++..+.+|.|+.-.+..-... ........ ...+..+........|+..+..|.+..+.
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~ 173 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFS 173 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEE
Confidence 344444 4442 5788999999999999886541110 11112222 23355554445556788888899988888
Q ss_pred CCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCee-------eee--eecc
Q 015438 198 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL-------SLR--ILAH 268 (407)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~-------~~~--~~~~ 268 (407)
+...+....-........+.+ .....|.++...+.+..++..+..|.++.-.+..-.. +.. +...
T Consensus 174 ~~~~eip~~gr~a~Gv~~i~L------~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~ 247 (327)
T 3uc1_A 174 ATDEALRPMGRATSGVQGMRF------NIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRR 247 (327)
T ss_dssp CCTTTSCCCCTTSBCEESSCC------CTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTT
T ss_pred CcccccCcCCcCCCCeeeecC------CCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCC
Confidence 762111111110000111111 1122566666666667899999999999887643221 222 2222
Q ss_pred CCCeEEEEecCCCCCEEEEEeCCCcEEEEeCc
Q 015438 269 TSDVNTVCFGDESGHLIYSGSDDNLCKVWDRR 300 (407)
Q Consensus 269 ~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~ 300 (407)
.+.+..+... .....++..+.+|.+.-++..
T Consensus 248 ~d~lv~~~~~-~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 248 RGRLVGALIV-DDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp TCSEEEEEEE-CTTCEEEEEEGGGCEEEEEGG
T ss_pred CCeEEEEEEe-CCCccEEEEcCCCeEEEEehh
Confidence 3455555544 334456666777777777654
No 358
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=79.28 E-value=31 Score=29.92 Aligned_cols=205 Identities=8% Similarity=-0.029 Sum_probs=107.9
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCeEE-eEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCceecc-ccccc
Q 015438 134 ADGSLFVAGFQASQIRIYDVERGWKI-QKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESL-ANVTE 211 (407)
Q Consensus 134 ~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~-~~~~~ 211 (407)
|+...+++.+.+|.|+--.+..-... ......... ..+..+........|+..+..|.++-+....-..... ..-..
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~-D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT-DRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT-CCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 56677888999999987765311000 000112222 2344444444556677777888876665532110000 00000
Q ss_pred cccceeeeecCCCCccccEEEEEEeC---CCCEEEEeeCCCeEEEEEcCCC--------eeeeeeeccCCCeEEEEecCC
Q 015438 212 IHDGLDFSAADDGGYSFGIFSLKFST---DGRELVAGSSDDCIYVYDLEAN--------KLSLRILAHTSDVNTVCFGDE 280 (407)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~i~i~d~~~~--------~~~~~~~~~~~~v~~i~~s~~ 280 (407)
....+.+. ....|..+..-+ ++.+++..+.+|.++...+... .....+.. .+.+..+... .
T Consensus 82 i~~~i~L~------~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~-~ 153 (323)
T 1wp5_A 82 IANIIPID------RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLT-D 153 (323)
T ss_dssp GGGTSCCC------TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEE-C
T ss_pred hhhccCCC------CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEe-C
Confidence 00001110 111355443333 2567889999999999887422 22223332 3556666555 3
Q ss_pred CCCEEEEEeCCCcEEEEeCcccCC-----CCceeeeeccccCCeEEEEecCCCC-EEEEEeCCCcEEEEECCCC
Q 015438 281 SGHLIYSGSDDNLCKVWDRRCLNV-----KGKPAGVLMGHLEGITFIDSRGDGR-YLISNGKDQAIKLWDIRKM 348 (407)
Q Consensus 281 ~~~~l~s~~~d~~i~vwd~~~~~~-----~~~~~~~~~~~~~~i~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~ 348 (407)
....++..+.+|.+..++...... .+.....+. ....|.++..-+++. .|++.+..|..+..++...
T Consensus 154 ~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~ 226 (323)
T 1wp5_A 154 GMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLK-EGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEF 226 (323)
T ss_dssp SCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGS
T ss_pred CCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeC-CCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHc
Confidence 455677888899888887653211 122222222 234566665444444 7888899999888887653
No 359
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=77.47 E-value=49 Score=31.25 Aligned_cols=77 Identities=12% Similarity=0.100 Sum_probs=51.0
Q ss_pred CCeEEEEecCCCCCEEEEEe-CCCcEEEEeCcccC---------CCCceeeeeccccCCeEEEEecCCCCEEEEEeCCCc
Q 015438 270 SDVNTVCFGDESGHLIYSGS-DDNLCKVWDRRCLN---------VKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQA 339 (407)
Q Consensus 270 ~~v~~i~~s~~~~~~l~s~~-~d~~i~vwd~~~~~---------~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~ 339 (407)
.....+.++ |+|++++.++ .+.++.++|++... .....+.... ...+....+|+++|.-..|---|..
T Consensus 323 ksPHGv~vs-PDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSq 400 (638)
T 3sbq_A 323 KNPHGCNTS-SDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQ 400 (638)
T ss_dssp SSCCCEEEC-TTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTE
T ss_pred CCCcceeeC-CCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecce
Confidence 344567887 7888877766 57899999987311 0111122222 3346788899999955555568999
Q ss_pred EEEEECCCC
Q 015438 340 IKLWDIRKM 348 (407)
Q Consensus 340 i~iwd~~~~ 348 (407)
|.-|++...
T Consensus 401 vvkWni~~a 409 (638)
T 3sbq_A 401 VVKWNMEEA 409 (638)
T ss_dssp EEEEEHHHH
T ss_pred EEEEeccHH
Confidence 999999753
No 360
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=75.09 E-value=41 Score=29.18 Aligned_cols=211 Identities=9% Similarity=0.012 Sum_probs=112.4
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEE---cCC------CeEEeEeeeccccceEEEEE-EECC--CCCeEEEEeCCCeEE
Q 015438 127 AYVSQFSADGSLFVAGFQASQIRIYD---VER------GWKIQKDILAKSLRWTVTDT-SLSP--DQRHLVYASMSPIVH 194 (407)
Q Consensus 127 v~~~~~s~~~~~l~~~~~dg~i~iwd---~~~------~~~~~~~~~~~~~~~~v~~~-~~sp--~~~~l~~~~~dg~i~ 194 (407)
+..+........|+.-+..|.++-.. +.. |..+........ ...|..+ .... +..+++..+.+|.++
T Consensus 44 ~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~e~~~v~~T~~G~iK 122 (327)
T 3uc1_A 44 VAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQP-EERIAQVIQIRGYTDAPYLVLATRNGLVK 122 (327)
T ss_dssp EEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCT-TCCEEEEEEESSTTSSSEEEEEETTSEEE
T ss_pred EEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCC-CCEEEEEEEeccCCCCCEEEEEcCCCEEE
Confidence 33333334445555555667655444 322 222222222222 2234444 4432 577899999999999
Q ss_pred EEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcC--CC---------eeee
Q 015438 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE--AN---------KLSL 263 (407)
Q Consensus 195 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~--~~---------~~~~ 263 (407)
...+..-...... ....+.+. ....+..+........|+..+..|.+..+... .- ....
T Consensus 123 r~~l~~~~~~~r~----G~~~i~lk------e~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i 192 (327)
T 3uc1_A 123 KSKLTDFDSNRSG----GIVAVNLR------DNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGM 192 (327)
T ss_dssp EEEGGGGCCCCSS----CEESCBCC------TTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESS
T ss_pred EeEHHHhhccccC----ceEEEEEC------CCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeee
Confidence 8877542211100 00000000 11245555555555678888899999888776 21 1122
Q ss_pred eeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCC---Cceeee--eccccCCeEEEEecCCCCEEEEEeCCC
Q 015438 264 RILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVK---GKPAGV--LMGHLEGITFIDSRGDGRYLISNGKDQ 338 (407)
Q Consensus 264 ~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~---~~~~~~--~~~~~~~i~~~~~s~~~~~l~s~~~dg 338 (407)
.+. ....|.++... ..+..++..+..|.++.-.+..+... ++-+.. +..-...+..+....+...++..+.+|
T Consensus 193 ~L~-~~d~Vv~~~~~-~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G 270 (327)
T 3uc1_A 193 RFN-IDDRLLSLNVV-REGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGG 270 (327)
T ss_dssp CCC-TTCCEEEEEEC-CTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGG
T ss_pred cCC-CCCEEEEEEEE-CCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCC
Confidence 232 34456666665 44567889999999999887543211 122222 222123455554444555677778888
Q ss_pred cEEEEECCCCCC
Q 015438 339 AIKLWDIRKMSS 350 (407)
Q Consensus 339 ~i~iwd~~~~~~ 350 (407)
.+.-++......
T Consensus 271 ~~ir~~~~~i~~ 282 (327)
T 3uc1_A 271 GVIRTAARQVRK 282 (327)
T ss_dssp CEEEEEGGGSCB
T ss_pred eEEEEehhhccc
Confidence 888888765433
No 361
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=70.00 E-value=58 Score=28.77 Aligned_cols=166 Identities=8% Similarity=-0.016 Sum_probs=76.8
Q ss_pred CCceEEEEECC--CCCEEEEEeCCC----eEEEEEcCCCeEEeEeeec---c-c-------cceEEEEEEECCC--CCeE
Q 015438 124 TSRAYVSQFSA--DGSLFVAGFQAS----QIRIYDVERGWKIQKDILA---K-S-------LRWTVTDTSLSPD--QRHL 184 (407)
Q Consensus 124 ~~~v~~~~~s~--~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~---~-~-------~~~~v~~~~~sp~--~~~l 184 (407)
...|.+|++.| .+.+++.+ ..| .|... .+.+......... . . ....|.++++.|. ...|
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~-~~g~~g~gl~~s-~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l 131 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAA-RTGHLGPTVFRS-DDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTW 131 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEE-EC--CCEEEEEE-SSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCE
T ss_pred CCceEEEEECCCCCCeEEEEe-cCCCCCccEEEe-CCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEE
Confidence 45799999998 55555544 344 34333 2333222221110 1 0 1125888999872 4566
Q ss_pred EEEeCCCeEEEEECCCCceeccccccccccceeeeec--CCCCccccEEEEEEeCC-CCEEEEeeCCCeEEEEEcCCCee
Q 015438 185 VYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAA--DDGGYSFGIFSLKFSTD-GRELVAGSSDDCIYVYDLEANKL 261 (407)
Q Consensus 185 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~ 261 (407)
.+++..+-|...+-...................+... ........+.+|.++|. ...|+++..++.|+..+- .++.
T Consensus 132 ~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~D-gG~t 210 (394)
T 3b7f_A 132 YAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTD-AGTD 210 (394)
T ss_dssp EEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESS-TTSS
T ss_pred EEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECC-CCCC
Confidence 6666666555443222222211110000000000000 00011235788999883 345566655555554432 2222
Q ss_pred eeeeec-----c--------CCCeEEEEecCCCCCEEEEEeCCC
Q 015438 262 SLRILA-----H--------TSDVNTVCFGDESGHLIYSGSDDN 292 (407)
Q Consensus 262 ~~~~~~-----~--------~~~v~~i~~s~~~~~~l~s~~~d~ 292 (407)
-..+.. + ...+.+|.+.|.++..|+.+...+
T Consensus 211 W~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 211 WKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp CEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred ceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 222110 0 124888999866667777777655
No 362
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=68.59 E-value=37 Score=32.99 Aligned_cols=37 Identities=19% Similarity=0.129 Sum_probs=29.8
Q ss_pred cEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeeec
Q 015438 229 GIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA 267 (407)
Q Consensus 229 ~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 267 (407)
.|.++.+ +..++++-+.|.++++|++++++++.....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4665555 467999999999999999999998876543
No 363
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=67.65 E-value=11 Score=36.64 Aligned_cols=35 Identities=23% Similarity=0.348 Sum_probs=28.1
Q ss_pred CeEEEEecCCCCEEEEEeCCCcEEEEECCCCCCcccc
Q 015438 318 GITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASC 354 (407)
Q Consensus 318 ~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 354 (407)
.|.++.+ +..++++-+.|.++|+|++++++.+.+.
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 3555544 5789999999999999999998876654
No 364
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=61.18 E-value=1.3e+02 Score=29.46 Aligned_cols=205 Identities=9% Similarity=-0.019 Sum_probs=99.4
Q ss_pred ceEEEE-ECCCCCEEEEEeC-C----CeEEEEEcCCCeEEeEeeeccccc-----eEEEEEEECCCCCeEEEE-------
Q 015438 126 RAYVSQ-FSADGSLFVAGFQ-A----SQIRIYDVERGWKIQKDILAKSLR-----WTVTDTSLSPDQRHLVYA------- 187 (407)
Q Consensus 126 ~v~~~~-~s~~~~~l~~~~~-d----g~i~iwd~~~~~~~~~~~~~~~~~-----~~v~~~~~sp~~~~l~~~------- 187 (407)
....+. ++|++++++.+-. . ..|+++|+.+++.+...+...... .....++|..++..+++.
T Consensus 130 ~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 130 AYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCB
T ss_pred EEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCc
Confidence 445555 8999998775422 2 359999999985553222200000 012334775333333321
Q ss_pred ---eCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCE-----EEEee---CCCeEEEEEc
Q 015438 188 ---SMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRE-----LVAGS---SDDCIYVYDL 256 (407)
Q Consensus 188 ---~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-----l~~~~---~dg~i~i~d~ 256 (407)
+....|+.|.+.+.......-..... .. --.....++++++ +++.+ ....+++.|.
T Consensus 210 ~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~------------~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 276 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESIEKAKKLFEVPK------------EY-IYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDT 276 (711)
T ss_dssp CTTSSBCEEEEEETTSCGGGCEEEEECCT------------TS-CEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEEC
T ss_pred CcCCCCCEEEEEECCCChHHCeEEeccCC------------Cc-eEEEEEEecCCCceEEEEEEEEecccCceeEEEEcC
Confidence 12246777877655322111111100 01 1223445566652 44333 2245677776
Q ss_pred CC--CeeeeeeeccCCCeEEEEecCCCCCEEEEE----------eCCCcEEEEeCcccCCC---Cceeee-ec-cccCCe
Q 015438 257 EA--NKLSLRILAHTSDVNTVCFGDESGHLIYSG----------SDDNLCKVWDRRCLNVK---GKPAGV-LM-GHLEGI 319 (407)
Q Consensus 257 ~~--~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~----------~~d~~i~vwd~~~~~~~---~~~~~~-~~-~~~~~i 319 (407)
.. ++ +..+..... . .+..+ ..+.+++.. ...+.|...|+...... ...... +. .....+
T Consensus 277 ~~~~~~-~~~l~~~~~-~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 352 (711)
T 4hvt_A 277 KYKNLK-LQKINMPSD-A-TLQGS-FKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVF 352 (711)
T ss_dssp SSSSCE-EEECCSCTT-C-EEEEE-ETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEE
T ss_pred CCCCCc-ceEeecCCc-c-eEeee-ECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeE
Confidence 53 33 223322222 1 12232 344454422 24677899998732110 111222 22 223457
Q ss_pred EEEEecCCCCEEEEEeCCCc--EEEEECCCC
Q 015438 320 TFIDSRGDGRYLISNGKDQA--IKLWDIRKM 348 (407)
Q Consensus 320 ~~~~~s~~~~~l~s~~~dg~--i~iwd~~~~ 348 (407)
..+.|..+ ..+++...++. |.++|+.++
T Consensus 353 ~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g 382 (711)
T 4hvt_A 353 NFISTTKD-RVFLATYDNVVAKVVTFTLENE 382 (711)
T ss_dssp EEEEECSS-CEEEEEEETTEEEEEEECEETT
T ss_pred EEEEEECC-EEEEEEEECCEEEEEEEECCCC
Confidence 78888865 56677777765 667776554
No 365
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=58.75 E-value=46 Score=31.63 Aligned_cols=60 Identities=25% Similarity=0.296 Sum_probs=40.1
Q ss_pred ceEEEEECCCCCEEEEEeCC------------CeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEE
Q 015438 126 RAYVSQFSADGSLFVAGFQA------------SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA 187 (407)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~ 187 (407)
..-.|+|+|.|++++.-..+ +.+.+.+..+++ +..+.. .....+++.++|+||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~-~~rf~~-~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGE-IRRFMV-GPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCC-EEEEEE-CCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCe-EEEEEe-CCCCccCcCeeECCCCCEEEEE
Confidence 45678999999977654322 235566666663 333322 2345689999999999888775
No 366
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=53.28 E-value=1e+02 Score=25.88 Aligned_cols=208 Identities=7% Similarity=-0.010 Sum_probs=114.1
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEE---EcCCCeEEeEeeeccccceEEEEEEECC-CCCeEEEEeCCCeEEEEECC
Q 015438 124 TSRAYVSQFSADGSLFVAGFQASQIRIY---DVERGWKIQKDILAKSLRWTVTDTSLSP-DQRHLVYASMSPIVHIVDVG 199 (407)
Q Consensus 124 ~~~v~~~~~s~~~~~l~~~~~dg~i~iw---d~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~dg~i~vwd~~ 199 (407)
.+.+..+.-.....+|+.-+..|.++-- ++..+.... . .. ....|..+.... +..+++..+.+|.++...+.
T Consensus 23 gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~--l-l~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~ 98 (276)
T 3no0_A 23 KAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVS--L-KS-REEKIVGAFIREKFGNRLLLATKKGYVKKIPLA 98 (276)
T ss_dssp CCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECC--C-SS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGG
T ss_pred CCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccc--c-CC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHH
Confidence 3445555444444556556677776643 333222111 2 22 233466554321 46789999999999998875
Q ss_pred CCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCC---------CeeeeeeeccCC
Q 015438 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA---------NKLSLRILAHTS 270 (407)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~---------~~~~~~~~~~~~ 270 (407)
.-. ... .....+.+. ....+..+........++..+..|.++.+.... |.....+.. ..
T Consensus 99 ~~~-~~~----~G~~~i~lk------egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~-~d 166 (276)
T 3no0_A 99 EFE-YKA----QGMPIIKLT------EGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEK-ND 166 (276)
T ss_dssp GTT-TCS----TTEECSCCC------TTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TC
T ss_pred Hhh-hhc----CCeEEEecC------CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCC-CC
Confidence 432 110 000001110 112455555555566788889999998887642 112222322 34
Q ss_pred CeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCC---CCceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEE--EEC
Q 015438 271 DVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNV---KGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKL--WDI 345 (407)
Q Consensus 271 ~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~---~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~i--wd~ 345 (407)
.|..+... .++..++..+..|.++...+..... .++-+..+ ...+.+..+....+...++..+.+|.+.. +++
T Consensus 167 ~vv~~~~~-~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~ 244 (276)
T 3no0_A 167 ETSGLRIW-NGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQ 244 (276)
T ss_dssp CEEEEEEE-SSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEG
T ss_pred EEEEEEEe-CCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCH
Confidence 56665554 3456788889999999988754321 22223333 23344555444334456777788888888 887
Q ss_pred CCCC
Q 015438 346 RKMS 349 (407)
Q Consensus 346 ~~~~ 349 (407)
....
T Consensus 245 ~~i~ 248 (276)
T 3no0_A 245 KDIP 248 (276)
T ss_dssp GGSC
T ss_pred HHCC
Confidence 6543
No 367
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=52.18 E-value=30 Score=36.03 Aligned_cols=38 Identities=11% Similarity=0.159 Sum_probs=30.0
Q ss_pred EEEEEECCCCCeEEEEeCCCeEEEEECCCCceeccccc
Q 015438 172 VTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANV 209 (407)
Q Consensus 172 v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 209 (407)
+.++...++..++++-+.|+++++|++.++++.....+
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 44455567788999999999999999999987665443
No 368
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=51.78 E-value=1e+02 Score=29.13 Aligned_cols=62 Identities=23% Similarity=0.249 Sum_probs=41.4
Q ss_pred CceEEEEECCCCCEEEEEeC------------CCeEEEEEcCCCeEEeEeeeccccceEEEEEEECCCCCeEEEEe
Q 015438 125 SRAYVSQFSADGSLFVAGFQ------------ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS 188 (407)
Q Consensus 125 ~~v~~~~~s~~~~~l~~~~~------------dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 188 (407)
.....|.|+++|.+.+.... ...|..++..+++. ..... ......++.++|+||++.|.++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel-~~fl~-~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI-RRFMV-GPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCE-EEEEE-CCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeE-EEEEe-CCCCccccCCEECCCCCEEEEEE
Confidence 45678999999998774322 12567777766643 33222 12234689999999999888763
No 369
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=49.47 E-value=1.4e+02 Score=26.37 Aligned_cols=215 Identities=10% Similarity=0.053 Sum_probs=106.9
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCC--------eEEeEeeeccc-cceEEEEEEECCCCCeEEEEeCCCeEEEE
Q 015438 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERG--------WKIQKDILAKS-LRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (407)
Q Consensus 126 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~dg~i~vw 196 (407)
.+..++.+.-....++-..||.|+.|-.... ........... ....|..++-. ....++-..+|.|+.|
T Consensus 106 ~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~w 183 (389)
T 3kci_A 106 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTW 183 (389)
T ss_dssp CEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEE
T ss_pred ceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEe
Confidence 4566777777777777778999999964321 00111111111 11245555543 3455556678999999
Q ss_pred ECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCC-e----------eeeee
Q 015438 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN-K----------LSLRI 265 (407)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-~----------~~~~~ 265 (407)
-....................+.. -....|..++........++-..||.|+.|-.... + ....+
T Consensus 184 G~n~~GqLG~~~~~~~~~p~~v~~----~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v 259 (389)
T 3kci_A 184 GKGRYGRLGHSDSEDQLKPKLVEA----LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 259 (389)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGG----GTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEEC
T ss_pred CCCCCCCcCCCCCcccccceEecc----cCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEe
Confidence 764311100000000000000000 01124666666543345666678999999964321 1 11111
Q ss_pred ec-cCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCC--------CceeeeeccccCCeEEEEecCCCCEEEEEeC
Q 015438 266 LA-HTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVK--------GKPAGVLMGHLEGITFIDSRGDGRYLISNGK 336 (407)
Q Consensus 266 ~~-~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~--------~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~ 336 (407)
.. ....|..|+.. ....+.-..||.|..|-......- ..+.....-....|..++.. ....+.-..
T Consensus 260 ~~~~~~~v~~v~~G---~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G--~~h~~al~~ 334 (389)
T 3kci_A 260 DSLTGLGVVKVECG---SQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG--SLHCVCCTE 334 (389)
T ss_dssp GGGTTSCEEEEEEE---TTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEET
T ss_pred cccCCCcEEEEeCC---CCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEec--cCeEEEECC
Confidence 11 12246666653 334445578899999976421100 01111111112346666653 344555678
Q ss_pred CCcEEEEECCCCCCc
Q 015438 337 DQAIKLWDIRKMSSN 351 (407)
Q Consensus 337 dg~i~iwd~~~~~~~ 351 (407)
||.|..|=.+..-++
T Consensus 335 ~G~v~~wG~n~~GqL 349 (389)
T 3kci_A 335 DGEVYTWGDNDEGQL 349 (389)
T ss_dssp TCCEEEEECCTTSTT
T ss_pred CCCEEEeeCCCCCcC
Confidence 999999987765443
No 370
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=48.27 E-value=19 Score=37.56 Aligned_cols=39 Identities=31% Similarity=0.178 Sum_probs=32.5
Q ss_pred ccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCeeeeeee
Q 015438 228 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL 266 (407)
Q Consensus 228 ~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 266 (407)
..+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus 238 ~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 238 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp TCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred ceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 345566777888899999999999999999999887643
No 371
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=46.82 E-value=1.4e+02 Score=25.52 Aligned_cols=205 Identities=9% Similarity=0.002 Sum_probs=106.2
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCeEEeE------eeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCceecc-
Q 015438 134 ADGSLFVAGFQASQIRIYDVERGWKIQK------DILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESL- 206 (407)
Q Consensus 134 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~------~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~- 206 (407)
|+...+++.+.+|.|+--.+..-..... -...... ..+..+........|+..+..|.++-+....-.....
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~-D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE-DFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 4566788899999998777654211110 0011122 2233444444455666667778766665432100000
Q ss_pred ccccccccceeeeecCCCCccccEEEEEEe---CCCCEEEEeeCCCeEEEEEcCCC-------eeeeeeeccCCCeEEEE
Q 015438 207 ANVTEIHDGLDFSAADDGGYSFGIFSLKFS---TDGRELVAGSSDDCIYVYDLEAN-------KLSLRILAHTSDVNTVC 276 (407)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s---~~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~v~~i~ 276 (407)
..-......+.+ .....|..+..- .++.+++..+.+|.++...+... .....+..+ +.+..+.
T Consensus 80 a~G~~i~~~l~l------~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~ 152 (307)
T 1zi0_A 80 ARGRPIVNLLPL------EQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVD 152 (307)
T ss_dssp SCCEEGGGTSCC------CTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEE
T ss_pred CCCeEhhhccCC------CCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEE
Confidence 000000000000 011145554332 24567889999999999877422 122233333 5566655
Q ss_pred ecCCCCCEEEEEeCCCcEEEEeCcccCCC-----CceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 015438 277 FGDESGHLIYSGSDDNLCKVWDRRCLNVK-----GKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKM 348 (407)
Q Consensus 277 ~s~~~~~~l~s~~~d~~i~vwd~~~~~~~-----~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 348 (407)
.. .....++..+.+|.+..++....... +.....+. ....|.++...+++..|++.+..|.++-.++...
T Consensus 153 ~~-~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~ 227 (307)
T 1zi0_A 153 LT-SGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEY 227 (307)
T ss_dssp EE-CTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECGGGS
T ss_pred Ee-CCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHh
Confidence 54 34456777788888888776432111 22222222 2345666665555677899999999999887543
No 372
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=45.91 E-value=84 Score=29.84 Aligned_cols=58 Identities=21% Similarity=0.190 Sum_probs=38.0
Q ss_pred eEEEEecCCCCCEEEEEeCC------------CcEEEEeCcccCCCCceeeeeccc-cCCeEEEEecCCCCEEEEE
Q 015438 272 VNTVCFGDESGHLIYSGSDD------------NLCKVWDRRCLNVKGKPAGVLMGH-LEGITFIDSRGDGRYLISN 334 (407)
Q Consensus 272 v~~i~~s~~~~~~l~s~~~d------------~~i~vwd~~~~~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~s~ 334 (407)
.-.|+|+ +.|+++++-..+ +.+.+.+.. .++....+.++ ...++.++|+||++.|+..
T Consensus 478 PDNL~fd-~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~----~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFD-KAGRLWILTDGDSSNAGDFAGMGNNQMLCADPA----TGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEEC-TTCCEEEEECCCCCCSGGGTTTCSCEEEEECTT----TCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEEC-CCCCEEEEecCCCcccccccccccceEEEEeCC----CCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4678997 778876654322 234455554 45555545544 3569999999999988766
No 373
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=43.06 E-value=1.3e+02 Score=28.52 Aligned_cols=60 Identities=18% Similarity=0.148 Sum_probs=38.8
Q ss_pred CeEEEEecCCCCCEEEEEeC------------CCcEEEEeCcccCCCCceeeeeccc-cCCeEEEEecCCCCEEEEEe
Q 015438 271 DVNTVCFGDESGHLIYSGSD------------DNLCKVWDRRCLNVKGKPAGVLMGH-LEGITFIDSRGDGRYLISNG 335 (407)
Q Consensus 271 ~v~~i~~s~~~~~~l~s~~~------------d~~i~vwd~~~~~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~s~~ 335 (407)
....|.|. ++|.+.++... .+.+..++.. .++....+.+. ...++.++|+||++.|+++-
T Consensus 477 sPDnL~fd-~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~----tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFD-KAGRLWILTDGDSSNAGDFAGMGNNQMLCADPA----TGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEEC-TTCCEEEEECCCCCCSGGGTTCCSCEEEEECTT----TCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEEC-CCCCEEEEeCCCcCccccccccCCceEEEEeCC----CCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 45678996 77887774321 1245566654 45554444433 34689999999999887764
No 374
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=41.78 E-value=1.9e+02 Score=25.67 Aligned_cols=145 Identities=8% Similarity=0.066 Sum_probs=80.7
Q ss_pred CeEEEEECCCC--ceeccccccccccceeeeecCCCCccccEEEEEEe---CC----CCEEEEee-CCCeEEEEEcCCCe
Q 015438 191 PIVHIVDVGSG--TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFS---TD----GRELVAGS-SDDCIYVYDLEANK 260 (407)
Q Consensus 191 g~i~vwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s---~~----~~~l~~~~-~dg~i~i~d~~~~~ 260 (407)
.+|.+||+.++ +......+....- .....+..+.+. |. +.+++.+. ..+-|.++|+.+++
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~----------~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~ 192 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLV----------EKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQD 192 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGC----------CCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTE
T ss_pred ceEEEEECCCCCceeEEEEECCHHhc----------ccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCc
Confidence 36888999888 7665554432110 012357788887 22 23444443 46779999999887
Q ss_pred eeeeee----cc--------------CCCeEEEEecCCC---CCEEEEEeCCC-cEEEEeC---cccCCCCceeeeeccc
Q 015438 261 LSLRIL----AH--------------TSDVNTVCFGDES---GHLIYSGSDDN-LCKVWDR---RCLNVKGKPAGVLMGH 315 (407)
Q Consensus 261 ~~~~~~----~~--------------~~~v~~i~~s~~~---~~~l~s~~~d~-~i~vwd~---~~~~~~~~~~~~~~~~ 315 (407)
..+.+. .. ...+..|+.+|.. ++.|+-....+ .+.--.. +... ....+..+ +.
T Consensus 193 swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~-~~~~v~~~-G~ 270 (381)
T 3q6k_A 193 SWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKG-GKLNPELL-GN 270 (381)
T ss_dssp EEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTT-CCCCCEEE-EE
T ss_pred EEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcc-hhhceEEe-ee
Confidence 544431 00 2357778887431 45565555443 2332221 2111 11122222 22
Q ss_pred c---CCeEEEEec-CCCCEEEEEeCCCcEEEEECCC
Q 015438 316 L---EGITFIDSR-GDGRYLISNGKDQAIKLWDIRK 347 (407)
Q Consensus 316 ~---~~i~~~~~s-~~~~~l~s~~~dg~i~iwd~~~ 347 (407)
. ..-..++.+ .+|..+++--....|..|+..+
T Consensus 271 kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 271 RGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp CCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred cCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 2 223456675 6788788888899999999875
No 375
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=38.05 E-value=2.3e+02 Score=27.27 Aligned_cols=72 Identities=15% Similarity=0.080 Sum_probs=44.4
Q ss_pred CCceEEEEEC----CCCC---EEEEEeCCCeEEEE-EcCCCeEEeEeeeccccceEEEEEEECCCC--CeEEEEeCCCeE
Q 015438 124 TSRAYVSQFS----ADGS---LFVAGFQASQIRIY-DVERGWKIQKDILAKSLRWTVTDTSLSPDQ--RHLVYASMSPIV 193 (407)
Q Consensus 124 ~~~v~~~~~s----~~~~---~l~~~~~dg~i~iw-d~~~~~~~~~~~~~~~~~~~v~~~~~sp~~--~~l~~~~~dg~i 193 (407)
....+.|+.. .+++ .++.|..+|.|.-. ....+..+......-....+|..|.++++. .+|.+++..+.+
T Consensus 396 ~~~~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~ 475 (663)
T 1olz_A 396 DVNYTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVV 475 (663)
T ss_dssp SCCEEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEE
T ss_pred CCceEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEE
Confidence 3346677653 4443 57788899987443 444332222222222334578899999987 889888887755
Q ss_pred EE
Q 015438 194 HI 195 (407)
Q Consensus 194 ~v 195 (407)
+|
T Consensus 476 ~v 477 (663)
T 1olz_A 476 QA 477 (663)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 376
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=32.36 E-value=2.6e+02 Score=24.55 Aligned_cols=204 Identities=9% Similarity=0.062 Sum_probs=98.3
Q ss_pred CCEEEEEeCCCeEEEEEcCCC--------eEEeEeeecc-ccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCceecc
Q 015438 136 GSLFVAGFQASQIRIYDVERG--------WKIQKDILAK-SLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESL 206 (407)
Q Consensus 136 ~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~ 206 (407)
....++-..||.|..|-.... .......... .....+..++.+......++-..+|.|+.|-.........
T Consensus 62 ~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~ 141 (389)
T 3kci_A 62 EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 141 (389)
T ss_dssp TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCS
T ss_pred CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCC
Confidence 344555567788888854321 1111111111 1122345566666667777778899999997543211100
Q ss_pred ccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCC-e----------eeeeee-ccCCCeEE
Q 015438 207 ANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN-K----------LSLRIL-AHTSDVNT 274 (407)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-~----------~~~~~~-~~~~~v~~ 274 (407)
-..........+.. . ....|..++.. ....++-..+|.|+.|-.... + ....+. .....|..
T Consensus 142 g~~~~~~~p~~v~~--l--~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ 215 (389)
T 3kci_A 142 GNRSPCDRPRVIES--L--RGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD 215 (389)
T ss_dssp SSCCCEEEEEECGG--G--TTSCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEE
T ss_pred CCCccCcCCeEecc--c--CCCeEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEE
Confidence 00000000000000 0 01145555554 335555667899999965321 1 001111 12335667
Q ss_pred EEecCCCCCEEEEEeCCCcEEEEeCcccCCC------Ccee-eeecc-ccCCeEEEEecCCCCEEEEEeCCCcEEEEECC
Q 015438 275 VCFGDESGHLIYSGSDDNLCKVWDRRCLNVK------GKPA-GVLMG-HLEGITFIDSRGDGRYLISNGKDQAIKLWDIR 346 (407)
Q Consensus 275 i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~------~~~~-~~~~~-~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~ 346 (407)
++.. ......+.-..||.|..|-......- .... ..+.. ....|..++.. ..+.+.-..||.|..|=..
T Consensus 216 ia~G-~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G--~~hs~alt~~G~v~~wG~n 292 (389)
T 3kci_A 216 IACG-SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG--SQFSVALTKSGAVYTWGKG 292 (389)
T ss_dssp EEEC-CSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEE--TTEEEEEETTSCEEEEECC
T ss_pred EEEc-CCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCC--CCEEEEEeCCCeEEEEeCC
Confidence 7663 22345666678999999975421100 0011 11111 12246666653 3344555789999999866
Q ss_pred CC
Q 015438 347 KM 348 (407)
Q Consensus 347 ~~ 348 (407)
..
T Consensus 293 ~~ 294 (389)
T 3kci_A 293 DY 294 (389)
T ss_dssp GG
T ss_pred CC
Confidence 53
No 377
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=30.66 E-value=2.8e+02 Score=24.39 Aligned_cols=251 Identities=11% Similarity=0.013 Sum_probs=0.0
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCeEEe-----EeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECCCCceecccc
Q 015438 134 ADGSLFVAGFQASQIRIYDVERGWKIQ-----KDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLAN 208 (407)
Q Consensus 134 ~~~~~l~~~~~dg~i~iwd~~~~~~~~-----~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 208 (407)
|+..++++.+.+|.|+--.+..-.... ...........+..+........|+..+..|.++-+.... +..
T Consensus 5 ~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~e-----ip~ 79 (370)
T 3l6v_A 5 APEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQ-----LPE 79 (370)
T ss_dssp CCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGG-----SCB
T ss_pred cCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHH-----CcC
Q ss_pred ccccccceeeeecCCCCccccEEEEEEeC---CCCEEEEeeCCCeEEEEEc-------CCCeeeeeeeccCCCeEEEEec
Q 015438 209 VTEIHDGLDFSAADDGGYSFGIFSLKFST---DGRELVAGSSDDCIYVYDL-------EANKLSLRILAHTSDVNTVCFG 278 (407)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~i~i~d~-------~~~~~~~~~~~~~~~v~~i~~s 278 (407)
......+......-.-.....|.++..-. ++.+|+.++..|.++...+ +.+.....+.. .+.+..+...
T Consensus 80 ~~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~ 158 (370)
T 3l6v_A 80 AGSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALT 158 (370)
T ss_dssp CCTTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEE
T ss_pred CCcccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEe
Q ss_pred CCCCCEEEEEeCCCcEEEEeCcccCCCCceeeeec----cccCCeEEEEecC----------------------------
Q 015438 279 DESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLM----GHLEGITFIDSRG---------------------------- 326 (407)
Q Consensus 279 ~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~----~~~~~i~~~~~s~---------------------------- 326 (407)
.....++..+.+|.+..++.......+....-.. .....|.++...+
T Consensus 159 -~~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~ 237 (370)
T 3l6v_A 159 -DGDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAV 237 (370)
T ss_dssp -CSCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC--------------------------
T ss_pred -CCCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEeccccccccccccccccccccccccccccc
Q ss_pred -------CCCEEEEEeCCCcEEEEECCCCCCcccccCCCccccccceeeeCCCCCCccC----CCCCcceEEEeCCccce
Q 015438 327 -------DGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLK----HPCDQSVATYKGHSVLR 395 (407)
Q Consensus 327 -------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~----~~~~~~v~~~~gh~~~~ 395 (407)
++..+++.+..|..+...+..... .......+..+.+......+. +..++.+.+.....
T Consensus 238 ~~~~~~~~~~~il~vTe~G~gKrt~~~e~~~-------~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G--- 307 (370)
T 3l6v_A 238 IDVADNGDVAYILTATENGYGKRTPLAEYPR-------KGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGG--- 307 (370)
T ss_dssp ---------CEEEEEETTSEEEEEEGGGSCC-------BCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTC---
T ss_pred cccccccCCceEEEeeCCCCEEEEEHHHhcc-------cccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCC---
Q ss_pred eeEEEe
Q 015438 396 TLIRCH 401 (407)
Q Consensus 396 ~~~~~~ 401 (407)
.++|+.
T Consensus 308 ~~iR~~ 313 (370)
T 3l6v_A 308 TLVRTR 313 (370)
T ss_dssp CEEEEE
T ss_pred eEEEee
No 378
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=28.30 E-value=98 Score=29.02 Aligned_cols=71 Identities=10% Similarity=0.009 Sum_probs=42.9
Q ss_pred CceEEEEECCCCC--EEEEEeCCCeEEEEEcCCCe---EEeEeeeccccceEEE-EEEECCCCCeEEEEeCCCeEEE
Q 015438 125 SRAYVSQFSADGS--LFVAGFQASQIRIYDVERGW---KIQKDILAKSLRWTVT-DTSLSPDQRHLVYASMSPIVHI 195 (407)
Q Consensus 125 ~~v~~~~~s~~~~--~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~v~-~~~~sp~~~~l~~~~~dg~i~v 195 (407)
...++|+....+. .++.|..+|.|.-..+..+. .+...........+|. .|.++++..+|.+++.++.++|
T Consensus 400 ~~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 400 DRLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp SCEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred cceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 3466666655443 46678889987665554321 1222222222244675 8999999999999887664443
No 379
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=28.05 E-value=2.8e+02 Score=23.54 Aligned_cols=207 Identities=8% Similarity=-0.034 Sum_probs=107.9
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEc---CC------CeEEeEeeeccccceEEEEEEE-C--CCCCeEEEEeCCCeEEEE
Q 015438 129 VSQFSADGSLFVAGFQASQIRIYDV---ER------GWKIQKDILAKSLRWTVTDTSL-S--PDQRHLVYASMSPIVHIV 196 (407)
Q Consensus 129 ~~~~s~~~~~l~~~~~dg~i~iwd~---~~------~~~~~~~~~~~~~~~~v~~~~~-s--p~~~~l~~~~~dg~i~vw 196 (407)
.+........|+..+..|.++-+.. .. |..+....... ....|.++.. . .++.+++..+..|.++..
T Consensus 46 ~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt 124 (307)
T 1zi0_A 46 RLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKT 124 (307)
T ss_dssp EEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEE
T ss_pred EEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEE
Confidence 3333334455666667787665553 22 22111111222 2223555433 2 345678888999999988
Q ss_pred ECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCe---------eeeeeec
Q 015438 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK---------LSLRILA 267 (407)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~---------~~~~~~~ 267 (407)
.+..-..... .+.... ..... ..+..+........++..+.+|.+..++...-. ....+.
T Consensus 125 ~l~e~~~~~r-------~G~~~i--~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~- 193 (307)
T 1zi0_A 125 VLTEFNRLRT-------AGKVAI--KLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG- 193 (307)
T ss_dssp EGGGGTTCCT-------TCEESS--CCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-
T ss_pred EHHHhhcccc-------CCeEEE--EECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-
Confidence 7642211110 000000 00011 245555554455578888889998888764321 112232
Q ss_pred cCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCC-----CceeeeeccccCCeEEEEecCCCCEEEEEeCCCcEEE
Q 015438 268 HTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVK-----GKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKL 342 (407)
Q Consensus 268 ~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~-----~~~~~~~~~~~~~i~~~~~s~~~~~l~s~~~dg~i~i 342 (407)
....|.++... .++..+++.+..|.++-.++..+... +.....+..-.+.+-.+....+...++..+.+|.+.-
T Consensus 194 ~~d~Vv~~~~~-~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir 272 (307)
T 1zi0_A 194 EGDKVVSLIVP-RGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVR 272 (307)
T ss_dssp TTCCEEEEECC-CSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEE
T ss_pred CCCEEEEEEEe-cCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEE
Confidence 34556666654 44567888899999999888543211 1122223222345545444334455667777888777
Q ss_pred EECCCC
Q 015438 343 WDIRKM 348 (407)
Q Consensus 343 wd~~~~ 348 (407)
+++...
T Consensus 273 ~~~~~i 278 (307)
T 1zi0_A 273 TRVSEI 278 (307)
T ss_dssp EEGGGS
T ss_pred Eecccc
Confidence 776653
No 380
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=27.97 E-value=2.6e+02 Score=23.25 Aligned_cols=166 Identities=8% Similarity=-0.056 Sum_probs=92.3
Q ss_pred CCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCCe--E-EeEeeeccccceEEEEEEECCCCCeEEEEeCCCeEEEEECC
Q 015438 124 TSRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGW--K-IQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVG 199 (407)
Q Consensus 124 ~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~--~-~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~i~vwd~~ 199 (407)
...|..+-... +..+++..+.+|.|+-..+..-. . -........ ...+..+........++..+..|.+..+...
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~ 145 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVR 145 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhh
Confidence 45566654421 46789999999999999875421 0 001111222 2345555555566678888889998888764
Q ss_pred CCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCC-------eeeeeeeccCCCe
Q 015438 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN-------KLSLRILAHTSDV 272 (407)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~v 272 (407)
.-.... ........+.+. ....|..+...+++..++..+..|.++...+..- +-+..+ ...+.+
T Consensus 146 eip~~g--R~a~Gv~~i~L~------~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~l 216 (276)
T 3no0_A 146 EVPPST--PGARGVQGIKLE------KNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTL 216 (276)
T ss_dssp GSCBCC--TTCCCEECCCCC------TTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCE
T ss_pred hCCCcC--CCCCCEEEEccC------CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcE
Confidence 211100 000000011110 1135666655566678889999999998887532 222333 234455
Q ss_pred EEEEecCCCCCEEEEEeCCCcEEE--EeCc
Q 015438 273 NTVCFGDESGHLIYSGSDDNLCKV--WDRR 300 (407)
Q Consensus 273 ~~i~~s~~~~~~l~s~~~d~~i~v--wd~~ 300 (407)
..+... .....++..+.+|.+.. ++..
T Consensus 217 v~~~~~-~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 217 VDLIPI-KEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp EEEEEE-SSEEEEEEEETTSCEEEEEEEGG
T ss_pred EEEEEe-CCCCEEEEEcCCCeEEEeeeCHH
Confidence 555443 33345666777787777 7764
No 381
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=27.34 E-value=4.6e+02 Score=25.82 Aligned_cols=159 Identities=13% Similarity=0.029 Sum_probs=74.0
Q ss_pred CCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCCeEEeEeeeccc----cceEEEEEEECCCC-CeEEEEeCCCe----E
Q 015438 124 TSRAYVSQFSAD-GSLFVAGFQASQIRIYDVERGWKIQKDILAKS----LRWTVTDTSLSPDQ-RHLVYASMSPI----V 193 (407)
Q Consensus 124 ~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~~v~~~~~sp~~-~~l~~~~~dg~----i 193 (407)
.+.|.+|+++|. ...++++...+.|...+ +.+........... ....|.++++.|.. ..++++..... -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 468999999996 34556666666665554 34433333221111 12358999998843 34444432211 2
Q ss_pred EEEEC-CCCceeccccccccccceeeeecCCCCccccEEEEEEeCC-CCEEEEeeCCCeEEEEEcCCCeeeeeee-----
Q 015438 194 HIVDV-GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-GRELVAGSSDDCIYVYDLEANKLSLRIL----- 266 (407)
Q Consensus 194 ~vwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~----- 266 (407)
.||.- ..++.=...... +...........+..++++|. ...++++...+.|+. ....++.-..+.
T Consensus 93 ~v~~S~DgG~TW~~~~~~-------~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~~~~ 164 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESP-------FPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIPDA 164 (789)
T ss_dssp EEEEESSTTSEEEEEECS-------SCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTSCCC
T ss_pred EEEEECCCCCcceeccCC-------cccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccCccc
Confidence 23332 223211111000 000000000012455777774 345666664443332 222222212211
Q ss_pred -ccCCCeEEEEecCCCCCEEEEEeCC
Q 015438 267 -AHTSDVNTVCFGDESGHLIYSGSDD 291 (407)
Q Consensus 267 -~~~~~v~~i~~s~~~~~~l~s~~~d 291 (407)
.....+..+.+.|.++..++.+..+
T Consensus 165 ~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 165 FTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp CSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred cCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 1124578899986666666666654
No 382
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=23.34 E-value=3.1e+02 Score=22.50 Aligned_cols=106 Identities=10% Similarity=-0.002 Sum_probs=57.9
Q ss_pred EEEEeeCCCeEEEEEcCCCee-eeeeeccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCccc---CCCCceeeeec--c
Q 015438 241 ELVAGSSDDCIYVYDLEANKL-SLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCL---NVKGKPAGVLM--G 314 (407)
Q Consensus 241 ~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~---~~~~~~~~~~~--~ 314 (407)
.+++.+.+|.|+--....... ...+... ..+..+... ...+.|+..+..|.+.-+..... ...+.++..+. .
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~-D~l~~~~~~-~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~ 81 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAG-DSFKAAVKG-KSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP 81 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTT-CCEEEEEEE-ETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCC-CEEEEEEEe-CCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC
Confidence 455667788777665543211 1123333 344444443 23334556677887666554322 22333322111 1
Q ss_pred ccCCeEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 015438 315 HLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKM 348 (407)
Q Consensus 315 ~~~~i~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 348 (407)
....|.++....++.+|+.++..|.++...+...
T Consensus 82 ~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~ 115 (256)
T 1zvt_A 82 PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDL 115 (256)
T ss_dssp TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGG
T ss_pred CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHh
Confidence 2345766654345677889999999999998664
No 383
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=22.06 E-value=5.5e+02 Score=24.92 Aligned_cols=110 Identities=7% Similarity=0.018 Sum_probs=55.2
Q ss_pred EEEEEEECCCC-CeEEEEeCCCeEEEEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCC-CCEEEEeeCC
Q 015438 171 TVTDTSLSPDQ-RHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-GRELVAGSSD 248 (407)
Q Consensus 171 ~v~~~~~sp~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d 248 (407)
.|..++++|.. ..+.++...+.|...+-.......+....... .-....|.+|+++|. .+.++++...
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~----------~~~~~~i~~i~~dp~~~~~v~v~~~~ 93 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMD----------EYSYYGVESIATDPVDPNRVYIVAGM 93 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGG----------GGGGGCEEEEEECSSSTTCEEEEECS
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcc----------cccCCCcceEEeCCCCCCEEEEEecc
Confidence 68999999964 45666665666655543333222221100000 001236899999983 3444444321
Q ss_pred -------CeEEEEEc-CCCeeeeeeec-c--------CCCeEEEEecCCCCCEEEEEeC
Q 015438 249 -------DCIYVYDL-EANKLSLRILA-H--------TSDVNTVCFGDESGHLIYSGSD 290 (407)
Q Consensus 249 -------g~i~i~d~-~~~~~~~~~~~-~--------~~~v~~i~~s~~~~~~l~s~~~ 290 (407)
+...||-. ..++.-..+.. . ...+..|+++|.+++.++.+..
T Consensus 94 ~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~ 152 (737)
T 2cn3_A 94 YTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR 152 (737)
T ss_dssp CSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS
T ss_pred cccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec
Confidence 12344443 22332221111 1 1124678998777777777763
No 384
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=21.73 E-value=3.7e+02 Score=22.79 Aligned_cols=208 Identities=7% Similarity=-0.036 Sum_probs=104.7
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEcCC---C------eEEeEeeeccccceEEEEEEECC---CCCeEEEEeCCCeEE
Q 015438 127 AYVSQFSADGSLFVAGFQASQIRIYDVER---G------WKIQKDILAKSLRWTVTDTSLSP---DQRHLVYASMSPIVH 194 (407)
Q Consensus 127 v~~~~~s~~~~~l~~~~~dg~i~iwd~~~---~------~~~~~~~~~~~~~~~v~~~~~sp---~~~~l~~~~~dg~i~ 194 (407)
+..+........++..+..|.++-..... . ..+......... ..|..+...+ +..+|+..+..|.++
T Consensus 49 l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~i~~~l~l~~~-e~i~~~~~~~~~~~~~~ll~~T~~G~~k 127 (312)
T 1suu_A 49 IVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKGQNISELINLGDQ-EEILTIKNSKDLTDDAYLLLTTASGKIA 127 (312)
T ss_dssp EEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-------CBGGGTSCCCTT-CCEEEEEEESCCCTTCEEEEEETTSEEE
T ss_pred EEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCCCcChhhccCCCCC-CEEEEEEEeccCCCCCEEEEEeCCCeEE
Confidence 33444444455666677888877666431 1 111111112222 2344443322 456788889999998
Q ss_pred EEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCC---------eeeeee
Q 015438 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN---------KLSLRI 265 (407)
Q Consensus 195 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~---------~~~~~~ 265 (407)
...+..-.... ..+.... ... ....+..+........++..+.+|.+..+....- .....+
T Consensus 128 r~~l~~~~~~r-------~~G~~~i--~L~-~~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L 197 (312)
T 1suu_A 128 RFESTDFKAVK-------SRGVIVI--KLN-DKDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKL 197 (312)
T ss_dssp EEEGGGGCC-----------CEECB--CCC-TTCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCC
T ss_pred EEEHHHhhccC-------CCcEEEE--ecC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEe
Confidence 88775321110 0000000 000 1224555555555567888899999999987531 122223
Q ss_pred eccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCC-----CCceeeeec-cccCCeEEEEecCCCCEEEEEeCCCc
Q 015438 266 LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNV-----KGKPAGVLM-GHLEGITFIDSRGDGRYLISNGKDQA 339 (407)
Q Consensus 266 ~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~-----~~~~~~~~~-~~~~~i~~~~~s~~~~~l~s~~~dg~ 339 (407)
. ....|..+..- ..+..+++.+..|..+..++..... .+..+..+. .....+.++....+...++..+..|.
T Consensus 198 ~-~~d~vv~~~~v-~~~~~l~~vt~~G~~kr~~~~e~~~~~R~~kGv~~~~~~k~~~~~lv~~~~~~~~~~l~~~t~~g~ 275 (312)
T 1suu_A 198 K-EGDLFVKVLSV-KENPYLLIVSENGYGKRLNMSKISELKRGATGYTSYKKSDKKAGSVVDAIAVSEDDEILLVSKRSK 275 (312)
T ss_dssp C-TTCCEEEEEEC-TTCSEEEEEETTSEEEEEEGGGSCBCCTTCCCEECSCTTCTTTCSEEEEEEECTTCEEEEEETTCE
T ss_pred C-CCCEEEEEEEE-CCCCeEEEEECCCceEEEEHHHhcccCCCCCCEEeeEccCCCCCeEEEEEEeCCCCEEEEEeCCCe
Confidence 2 24456666554 3455677888999999998864311 111222222 22234433322234445555566675
Q ss_pred EEEEECCC
Q 015438 340 IKLWDIRK 347 (407)
Q Consensus 340 i~iwd~~~ 347 (407)
+.-..+..
T Consensus 276 ~~r~~~~~ 283 (312)
T 1suu_A 276 ALRTVAGK 283 (312)
T ss_dssp EEEEEGGG
T ss_pred EEEEEccc
Confidence 54444443
No 385
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=21.61 E-value=2.7e+02 Score=25.65 Aligned_cols=59 Identities=8% Similarity=-0.001 Sum_probs=0.0
Q ss_pred EEEEEeCCCcEEEEeCcccCC----CCceeeeecc--ccCCeEEEEecCCCCEEEEEeCCCcEEE
Q 015438 284 LIYSGSDDNLCKVWDRRCLNV----KGKPAGVLMG--HLEGITFIDSRGDGRYLISNGKDQAIKL 342 (407)
Q Consensus 284 ~l~s~~~d~~i~vwd~~~~~~----~~~~~~~~~~--~~~~i~~~~~s~~~~~l~s~~~dg~i~i 342 (407)
.+..|+.+|.|.-.-+..... ....+..+.- ...+|..+.++++..+|..++.++.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
No 386
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=20.05 E-value=4.1e+02 Score=22.69 Aligned_cols=211 Identities=7% Similarity=0.034 Sum_probs=106.7
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEcC---------CCeEEeEeeeccccceEEEEE-EECC--CCCeEEEEeCCCeEE
Q 015438 127 AYVSQFSADGSLFVAGFQASQIRIYDVE---------RGWKIQKDILAKSLRWTVTDT-SLSP--DQRHLVYASMSPIVH 194 (407)
Q Consensus 127 v~~~~~s~~~~~l~~~~~dg~i~iwd~~---------~~~~~~~~~~~~~~~~~v~~~-~~sp--~~~~l~~~~~dg~i~ 194 (407)
+..+........|+..+..|.+.-+... .|..+........ ...|.++ ...+ ++.+++..+.+|.++
T Consensus 41 l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~~~i~L~~-~e~Iv~~~~~~~~~~~~~ll~~T~~G~iK 119 (323)
T 1wp5_A 41 LLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANIIPIDR-DEEIIKAIPINDFELNGYFLFVTRNGMVK 119 (323)
T ss_dssp EEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCCT-TCCEEEEEEESCTTSSCEEEEEETTSEEE
T ss_pred EEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcChhhccCCCC-CCEEEEEEEecccCCCceEEEEeCCCeEE
Confidence 3333333344556666677876655542 1222212222222 2235543 3432 256788899999999
Q ss_pred EEECCCCceeccccccccccceeeeecCCCCccccEEEEEEeCCCCEEEEeeCCCeEEEEEcCCCe---------eeeee
Q 015438 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK---------LSLRI 265 (407)
Q Consensus 195 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~---------~~~~~ 265 (407)
...+..-..... ......+.+. .+ ..+..+........|+..+.+|.+..+....-. ....+
T Consensus 120 rt~l~e~~~~~r---~~G~~ai~l~----e~--d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L 190 (323)
T 1wp5_A 120 KTELKHYKAQRY---SKPLTGINLK----ND--DQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNL 190 (323)
T ss_dssp EEEGGGGCCSCC---SSCEECSCCC----TT--CCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCC
T ss_pred EeEHHHhhhccc---cCceEEEEeC----CC--CEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEe
Confidence 888752211110 0000000000 01 244455554455678888899999888874321 11222
Q ss_pred eccCCCeEEEEecCCCCCEEEEEeCCCcEEEEeCcccCCC---Cceeeeec---cccCCeEEEEecCCCCEEEEEeCCCc
Q 015438 266 LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVK---GKPAGVLM---GHLEGITFIDSRGDGRYLISNGKDQA 339 (407)
Q Consensus 266 ~~~~~~v~~i~~s~~~~~~l~s~~~d~~i~vwd~~~~~~~---~~~~~~~~---~~~~~i~~~~~s~~~~~l~s~~~dg~ 339 (407)
. ....|.++...+++...+++.+..|..+..++..+... ++-+..+. .....+..+....++..++..+..|.
T Consensus 191 ~-~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~ 269 (323)
T 1wp5_A 191 K-EGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILRELKANPHRISGFVVAQDSDTIYLQTEKSF 269 (323)
T ss_dssp C-TTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSCCCSSSCCCEEEEEEECTTCEEEEEETTSC
T ss_pred C-CCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECeeecCCCCceEEEEEEeCCCCeEEEEeCCCe
Confidence 2 23456666554333326778888999888887642211 22222222 11224543333333455667777888
Q ss_pred EEEEECCCC
Q 015438 340 IKLWDIRKM 348 (407)
Q Consensus 340 i~iwd~~~~ 348 (407)
+.-..+...
T Consensus 270 ~ir~~~~~i 278 (323)
T 1wp5_A 270 IETIKVGDI 278 (323)
T ss_dssp EEEEEGGGS
T ss_pred EEEEEhhhc
Confidence 777776653
Done!