Query 015439
Match_columns 406
No_of_seqs 264 out of 1461
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 06:19:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015439.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015439hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02580 trehalose-phosphatase 100.0 2.3E-83 4.9E-88 638.1 36.8 381 1-381 1-383 (384)
2 PLN03017 trehalose-phosphatase 100.0 5.3E-64 1.1E-68 495.3 33.5 325 41-381 35-365 (366)
3 PLN02151 trehalose-phosphatase 100.0 3.3E-61 7.1E-66 474.2 31.4 304 56-383 50-353 (354)
4 PLN02205 alpha,alpha-trehalose 100.0 4.5E-48 9.8E-53 421.3 26.6 316 26-378 478-848 (854)
5 PLN03064 alpha,alpha-trehalose 100.0 3.5E-45 7.5E-50 397.5 30.5 320 26-378 487-930 (934)
6 PLN03063 alpha,alpha-trehalose 100.0 3E-43 6.6E-48 383.0 30.4 322 27-379 404-788 (797)
7 PRK14501 putative bifunctional 100.0 8.9E-42 1.9E-46 370.6 27.3 310 26-376 389-725 (726)
8 PRK10187 trehalose-6-phosphate 100.0 5.6E-38 1.2E-42 302.6 28.8 232 117-379 14-248 (266)
9 PF02358 Trehalose_PPase: Treh 100.0 1.6E-38 3.4E-43 301.0 16.4 225 121-365 1-235 (235)
10 TIGR00685 T6PP trehalose-phosp 100.0 1.7E-36 3.7E-41 288.8 26.5 236 115-375 1-243 (244)
11 COG1877 OtsB Trehalose-6-phosp 100.0 2.3E-36 5E-41 288.0 25.4 242 111-379 12-256 (266)
12 KOG1050 Trehalose-6-phosphate 100.0 9.5E-34 2.1E-38 301.5 26.4 299 28-372 402-731 (732)
13 COG0561 Cof Predicted hydrolas 100.0 2.3E-29 5E-34 241.7 18.8 224 116-376 2-262 (264)
14 PRK10976 putative hydrolase; P 100.0 3.5E-29 7.6E-34 240.6 19.7 239 117-375 2-264 (266)
15 PRK10513 sugar phosphate phosp 100.0 1.5E-29 3.4E-34 243.5 16.4 239 116-375 2-268 (270)
16 PRK03669 mannosyl-3-phosphogly 100.0 2.5E-28 5.4E-33 235.9 22.1 224 116-377 6-270 (271)
17 PRK15126 thiamin pyrimidine py 100.0 8.1E-29 1.8E-33 239.1 16.5 237 117-376 2-263 (272)
18 PRK01158 phosphoglycolate phos 100.0 3.7E-28 8E-33 228.2 20.4 212 117-375 3-229 (230)
19 PLN02887 hydrolase family prot 100.0 1.5E-27 3.1E-32 250.7 18.7 246 111-375 302-579 (580)
20 TIGR01484 HAD-SF-IIB HAD-super 99.9 1.2E-27 2.7E-32 220.9 13.6 200 119-348 1-204 (204)
21 PF08282 Hydrolase_3: haloacid 99.9 7.6E-27 1.6E-31 219.3 15.6 211 120-371 1-254 (254)
22 PRK10530 pyridoxal phosphate ( 99.9 2.7E-26 5.8E-31 220.7 18.8 239 117-375 3-271 (272)
23 TIGR01485 SPP_plant-cyano sucr 99.9 4.7E-26 1E-30 217.4 17.9 228 117-374 1-246 (249)
24 TIGR01482 SPP-subfamily Sucros 99.9 5.3E-26 1.2E-30 212.6 17.4 211 120-374 1-224 (225)
25 TIGR01487 SPP-like sucrose-pho 99.9 8.6E-26 1.9E-30 210.6 17.1 207 118-371 2-215 (215)
26 TIGR02471 sucr_syn_bact_C sucr 99.9 1.2E-25 2.6E-30 212.7 16.9 217 119-374 1-234 (236)
27 TIGR00099 Cof-subfamily Cof su 99.9 1E-25 2.2E-30 215.5 16.5 231 119-371 1-256 (256)
28 TIGR01486 HAD-SF-IIB-MPGP mann 99.9 1.4E-25 3.1E-30 214.8 17.5 219 119-375 1-256 (256)
29 PRK00192 mannosyl-3-phosphogly 99.9 7.6E-24 1.7E-28 204.8 19.4 232 117-376 4-271 (273)
30 TIGR02463 MPGP_rel mannosyl-3- 99.9 1.2E-23 2.5E-28 196.8 16.4 195 119-348 1-220 (221)
31 PTZ00174 phosphomannomutase; P 99.9 4.5E-23 9.8E-28 196.8 18.4 204 114-352 2-234 (247)
32 PLN02382 probable sucrose-phos 99.9 3.2E-23 6.9E-28 211.3 18.3 238 114-383 6-268 (413)
33 PLN02423 phosphomannomutase 99.9 3.8E-22 8.3E-27 190.3 21.4 211 114-375 4-244 (245)
34 PF05116 S6PP: Sucrose-6F-phos 99.9 1E-22 2.2E-27 194.4 9.1 204 117-354 2-212 (247)
35 PRK14502 bifunctional mannosyl 99.9 1.2E-20 2.6E-25 198.5 21.2 211 114-352 413-660 (694)
36 TIGR02461 osmo_MPG_phos mannos 99.8 1.2E-20 2.6E-25 177.8 14.8 203 119-349 1-225 (225)
37 PRK12702 mannosyl-3-phosphogly 99.8 1.8E-19 4E-24 173.0 15.2 207 117-350 1-253 (302)
38 KOG1050 Trehalose-6-phosphate 99.8 1.2E-23 2.7E-28 224.4 -20.9 388 2-392 69-480 (732)
39 COG3769 Predicted hydrolase (H 99.6 3.8E-14 8.2E-19 129.3 15.2 210 116-352 6-238 (274)
40 KOG3189 Phosphomannomutase [Li 99.4 6E-12 1.3E-16 113.2 13.8 222 111-375 5-250 (252)
41 TIGR02468 sucrsPsyn_pln sucros 99.2 1.6E-10 3.5E-15 127.9 14.2 194 117-337 770-994 (1050)
42 PF03332 PMM: Eukaryotic phosp 99.1 1.7E-10 3.8E-15 106.5 9.7 194 144-375 1-219 (220)
43 TIGR01670 YrbI-phosphatas 3-de 99.1 3.2E-10 6.9E-15 100.6 8.5 71 299-377 76-151 (154)
44 PRK09484 3-deoxy-D-manno-octul 99.0 7.6E-10 1.6E-14 101.0 7.3 56 299-362 96-153 (183)
45 PRK11133 serB phosphoserine ph 99.0 5.6E-10 1.2E-14 110.6 5.3 67 297-372 246-316 (322)
46 cd01427 HAD_like Haloacid deha 98.8 1.4E-08 3.1E-13 85.3 8.4 56 119-174 1-60 (139)
47 PRK10117 trehalose-6-phosphate 98.6 7.7E-09 1.7E-13 106.7 -0.0 71 26-105 380-453 (474)
48 smart00775 LNS2 LNS2 domain. T 98.6 9.3E-08 2E-12 85.2 6.6 71 119-189 1-89 (157)
49 COG0560 SerB Phosphoserine pho 98.5 8.2E-07 1.8E-11 83.0 10.1 46 297-350 142-187 (212)
50 COG0380 OtsA Trehalose-6-phosp 98.4 5E-08 1.1E-12 100.5 -0.2 71 25-104 405-478 (486)
51 TIGR02398 gluc_glyc_Psyn gluco 98.4 5.3E-08 1.2E-12 101.3 -0.7 72 26-106 409-483 (487)
52 PF00982 Glyco_transf_20: Glyc 98.4 3.9E-08 8.4E-13 102.3 -2.0 70 25-103 399-472 (474)
53 TIGR02726 phenyl_P_delta pheny 98.3 4E-07 8.6E-12 82.1 3.6 70 299-376 82-156 (169)
54 COG1778 Low specificity phosph 98.2 1.1E-06 2.3E-11 77.0 2.8 73 298-378 82-159 (170)
55 TIGR01684 viral_ppase viral ph 98.1 5.3E-06 1.1E-10 80.4 7.0 71 114-189 123-201 (301)
56 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.1 6E-05 1.3E-09 72.1 13.0 64 118-187 2-74 (249)
57 TIGR01689 EcbF-BcbF capsule bi 98.1 6.5E-06 1.4E-10 70.6 5.6 52 118-169 2-55 (126)
58 PHA03398 viral phosphatase sup 97.8 3.9E-05 8.5E-10 74.5 6.6 72 114-190 125-204 (303)
59 TIGR01458 HAD-SF-IIA-hyp3 HAD- 97.3 0.00031 6.8E-09 67.5 4.6 65 300-371 181-254 (257)
60 TIGR01681 HAD-SF-IIIC HAD-supe 97.2 0.0005 1.1E-08 58.9 5.3 56 118-173 1-65 (128)
61 TIGR01662 HAD-SF-IIIA HAD-supe 97.2 0.00043 9.4E-09 59.1 4.3 47 118-164 1-51 (132)
62 TIGR01664 DNA-3'-Pase DNA 3'-p 97.1 0.00099 2.2E-08 59.8 6.3 51 115-165 11-69 (166)
63 PRK10444 UMP phosphatase; Prov 97.1 0.00061 1.3E-08 65.2 4.7 49 118-172 2-51 (248)
64 TIGR01525 ATPase-IB_hvy heavy 97.1 0.0031 6.7E-08 67.3 10.2 61 111-173 358-420 (556)
65 TIGR01672 AphA HAD superfamily 97.0 0.0022 4.7E-08 61.1 7.7 67 97-163 42-139 (237)
66 TIGR01452 PGP_euk phosphoglyco 96.9 0.0012 2.6E-08 64.2 5.0 44 118-167 3-47 (279)
67 TIGR02400 trehalose_OtsA alpha 96.9 0.0003 6.4E-09 73.3 0.5 72 24-104 379-455 (456)
68 PLN02645 phosphoglycolate phos 96.8 0.0012 2.6E-08 65.3 4.3 66 300-372 232-308 (311)
69 TIGR00338 serB phosphoserine p 96.8 0.00085 1.8E-08 62.3 3.1 64 299-370 152-218 (219)
70 TIGR00213 GmhB_yaeD D,D-heptos 96.5 0.0023 5E-08 57.7 3.4 61 300-368 108-175 (176)
71 TIGR01491 HAD-SF-IB-PSPlk HAD- 96.5 0.0033 7.1E-08 57.1 4.4 45 299-351 147-191 (201)
72 TIGR01488 HAD-SF-IB Haloacid D 96.3 0.0024 5.2E-08 56.9 2.5 40 293-336 137-176 (177)
73 PRK10671 copA copper exporting 96.2 0.0057 1.2E-07 68.4 5.1 68 290-372 694-765 (834)
74 TIGR01522 ATPase-IIA2_Ca golgi 96.1 0.053 1.1E-06 61.2 12.6 67 291-372 600-671 (884)
75 PRK13222 phosphoglycolate phos 96.1 0.013 2.8E-07 54.3 6.4 67 299-373 150-223 (226)
76 TIGR01656 Histidinol-ppas hist 96.1 0.0084 1.8E-07 52.4 4.6 47 119-165 2-54 (147)
77 PF06437 ISN1: IMP-specific 5' 96.1 0.25 5.4E-06 49.7 15.3 60 107-171 136-199 (408)
78 TIGR01490 HAD-SF-IB-hyp1 HAD-s 96.0 0.0077 1.7E-07 55.0 4.4 46 297-350 153-198 (202)
79 PRK11009 aphA acid phosphatase 96.0 0.015 3.3E-07 55.3 6.4 34 97-130 42-76 (237)
80 PF08645 PNK3P: Polynucleotide 96.0 0.0053 1.2E-07 54.8 3.0 44 118-161 1-52 (159)
81 COG4030 Uncharacterized protei 96.0 0.046 9.9E-07 51.2 9.0 76 297-377 189-267 (315)
82 TIGR01668 YqeG_hyp_ppase HAD s 95.9 0.018 3.9E-07 51.8 6.1 53 116-172 24-78 (170)
83 PHA02530 pseT polynucleotide k 95.9 0.02 4.4E-07 55.8 6.9 58 116-173 157-222 (300)
84 COG1778 Low specificity phosph 95.8 0.012 2.5E-07 52.0 4.3 59 115-173 6-70 (170)
85 TIGR01511 ATPase-IB1_Cu copper 95.8 0.017 3.6E-07 61.9 6.4 67 291-372 449-519 (562)
86 TIGR01512 ATPase-IB2_Cd heavy 95.8 0.014 3E-07 62.1 5.6 67 291-372 408-479 (536)
87 TIGR01533 lipo_e_P4 5'-nucleot 95.8 0.017 3.7E-07 55.9 5.6 67 102-168 60-148 (266)
88 TIGR01116 ATPase-IIA1_Ca sarco 95.8 0.023 5.1E-07 64.2 7.6 61 299-371 618-682 (917)
89 TIGR01460 HAD-SF-IIA Haloacid 95.7 0.015 3.3E-07 55.0 5.1 47 120-172 1-51 (236)
90 PF13344 Hydrolase_6: Haloacid 95.7 0.011 2.5E-07 48.5 3.6 45 120-170 1-46 (101)
91 PRK13582 thrH phosphoserine ph 95.6 0.013 2.8E-07 53.7 4.1 65 299-375 132-199 (205)
92 TIGR01647 ATPase-IIIA_H plasma 95.5 0.16 3.5E-06 56.3 13.0 68 289-371 515-586 (755)
93 TIGR01652 ATPase-Plipid phosph 95.5 0.061 1.3E-06 61.9 9.8 60 290-363 749-811 (1057)
94 TIGR02137 HSK-PSP phosphoserin 95.5 0.021 4.5E-07 53.0 4.9 65 297-373 130-197 (203)
95 smart00577 CPDc catalytic doma 95.5 0.028 6.1E-07 49.3 5.5 58 116-173 1-79 (148)
96 PLN02954 phosphoserine phospha 95.4 0.034 7.4E-07 51.6 6.4 67 297-371 153-223 (224)
97 PRK06769 hypothetical protein; 95.4 0.014 2.9E-07 52.7 3.5 49 116-164 3-54 (173)
98 TIGR01497 kdpB K+-transporting 95.4 0.018 3.9E-07 62.6 4.9 68 289-371 489-560 (675)
99 PRK08942 D,D-heptose 1,7-bisph 95.3 0.016 3.5E-07 52.3 3.6 64 301-372 106-177 (181)
100 COG2179 Predicted hydrolase of 95.3 0.062 1.3E-06 48.0 7.0 64 113-180 24-88 (175)
101 TIGR01261 hisB_Nterm histidino 95.2 0.017 3.8E-07 51.5 3.4 35 300-337 105-139 (161)
102 TIGR01663 PNK-3'Pase polynucle 95.2 0.037 7.9E-07 58.6 6.2 74 92-165 139-224 (526)
103 TIGR02726 phenyl_P_delta pheny 95.1 0.025 5.5E-07 51.0 4.1 58 117-174 7-70 (169)
104 PRK13582 thrH phosphoserine ph 95.1 0.035 7.5E-07 50.8 5.0 33 141-173 70-102 (205)
105 PRK13223 phosphoglycolate phos 95.0 0.036 7.8E-07 53.7 5.3 68 297-372 156-230 (272)
106 PRK13225 phosphoglycolate phos 95.0 0.062 1.4E-06 52.2 6.9 70 299-375 196-271 (273)
107 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.0 0.038 8.3E-07 52.4 5.2 45 117-167 8-53 (242)
108 PF06888 Put_Phosphatase: Puta 94.9 0.029 6.3E-07 53.2 4.2 79 292-374 144-233 (234)
109 PF09419 PGP_phosphatase: Mito 94.8 0.057 1.2E-06 48.6 5.7 47 112-162 36-85 (168)
110 PRK13288 pyrophosphatase PpaX; 94.8 0.053 1.2E-06 50.1 5.7 68 299-374 139-213 (214)
111 PRK05446 imidazole glycerol-ph 94.7 0.037 8.1E-07 55.7 4.6 48 116-163 1-55 (354)
112 PRK09552 mtnX 2-hydroxy-3-keto 94.6 0.067 1.5E-06 49.8 5.8 69 297-377 146-218 (219)
113 PRK11033 zntA zinc/cadmium/mer 94.6 0.037 8.1E-07 61.2 4.6 67 289-371 610-680 (741)
114 TIGR01675 plant-AP plant acid 94.5 0.11 2.3E-06 49.2 6.8 54 114-167 74-149 (229)
115 COG4087 Soluble P-type ATPase 94.5 0.051 1.1E-06 46.6 4.1 49 320-373 95-148 (152)
116 COG2217 ZntA Cation transport 94.5 0.055 1.2E-06 59.2 5.4 69 289-372 580-652 (713)
117 TIGR01449 PGP_bact 2-phosphogl 94.5 0.069 1.5E-06 48.9 5.4 63 300-370 143-212 (213)
118 TIGR01454 AHBA_synth_RP 3-amin 94.4 0.09 2E-06 48.2 6.2 66 299-372 132-204 (205)
119 TIGR00338 serB phosphoserine p 94.4 0.074 1.6E-06 49.2 5.7 33 140-172 86-119 (219)
120 cd03788 GT1_TPS Trehalose-6-Ph 94.4 0.013 2.7E-07 61.2 0.3 71 24-103 384-459 (460)
121 PF08235 LNS2: LNS2 (Lipin/Ned 94.3 0.067 1.5E-06 47.6 4.7 51 119-169 1-58 (157)
122 COG0546 Gph Predicted phosphat 94.3 0.095 2.1E-06 49.0 6.0 68 300-372 147-218 (220)
123 PLN02954 phosphoserine phospha 94.2 0.081 1.7E-06 49.1 5.4 34 140-173 85-119 (224)
124 PRK13226 phosphoglycolate phos 94.1 0.088 1.9E-06 49.4 5.5 64 300-371 153-224 (229)
125 PF03031 NIF: NLI interacting 94.1 0.057 1.2E-06 47.6 3.9 56 118-173 1-70 (159)
126 TIGR01685 MDP-1 magnesium-depe 94.0 0.11 2.4E-06 47.1 5.6 58 117-174 2-82 (174)
127 PLN03190 aminophospholipid tra 93.9 0.61 1.3E-05 54.2 12.6 69 290-376 852-923 (1178)
128 PRK09552 mtnX 2-hydroxy-3-keto 93.8 0.059 1.3E-06 50.2 3.7 14 117-130 3-16 (219)
129 TIGR01491 HAD-SF-IB-PSPlk HAD- 93.5 0.17 3.7E-06 45.7 6.0 32 142-173 83-115 (201)
130 PTZ00445 p36-lilke protein; Pr 93.3 0.22 4.8E-06 46.4 6.4 66 100-165 25-102 (219)
131 PF13242 Hydrolase_like: HAD-h 93.3 0.25 5.5E-06 37.8 5.8 58 302-366 8-74 (75)
132 TIGR01488 HAD-SF-IB Haloacid D 93.2 0.14 3E-06 45.4 4.9 34 140-173 74-108 (177)
133 KOG0210 P-type ATPase [Inorgan 93.0 0.087 1.9E-06 56.4 3.6 64 299-371 768-832 (1051)
134 TIGR02137 HSK-PSP phosphoserin 92.9 0.13 2.8E-06 47.7 4.3 35 139-173 68-102 (203)
135 TIGR01456 CECR5 HAD-superfamil 92.7 0.2 4.4E-06 49.7 5.7 49 319-371 264-320 (321)
136 TIGR03333 salvage_mtnX 2-hydro 92.7 0.17 3.6E-06 47.0 4.8 66 298-375 143-212 (214)
137 TIGR02245 HAD_IIID1 HAD-superf 92.7 0.23 4.9E-06 45.9 5.5 59 115-173 19-79 (195)
138 TIGR02250 FCP1_euk FCP1-like p 92.6 0.29 6.3E-06 43.5 6.0 60 114-173 3-92 (156)
139 PRK01122 potassium-transportin 92.6 0.16 3.5E-06 55.4 5.2 68 289-371 488-559 (679)
140 TIGR01523 ATPase-IID_K-Na pota 92.5 0.22 4.8E-06 57.3 6.3 67 290-371 727-798 (1053)
141 PRK10826 2-deoxyglucose-6-phos 92.5 0.2 4.3E-06 46.6 5.0 62 299-368 149-216 (222)
142 PF12710 HAD: haloacid dehalog 92.5 0.15 3.2E-06 45.8 4.0 33 299-335 157-192 (192)
143 TIGR02251 HIF-SF_euk Dullard-l 92.4 0.26 5.7E-06 43.9 5.5 57 117-173 1-76 (162)
144 TIGR01489 DKMTPPase-SF 2,3-dik 92.4 0.29 6.3E-06 43.6 5.8 37 294-337 145-181 (188)
145 PRK14010 potassium-transportin 92.3 0.16 3.4E-06 55.5 4.5 78 289-381 484-568 (673)
146 PF03767 Acid_phosphat_B: HAD 92.2 0.064 1.4E-06 50.7 1.3 53 115-167 70-144 (229)
147 TIGR01524 ATPase-IIIB_Mg magne 92.2 0.27 5.9E-06 55.4 6.5 68 289-371 583-654 (867)
148 COG0647 NagD Predicted sugar p 92.1 0.15 3.3E-06 49.4 3.8 44 116-165 7-51 (269)
149 TIGR01686 FkbH FkbH-like domai 92.0 0.41 8.8E-06 47.5 6.9 57 117-173 3-66 (320)
150 PF00702 Hydrolase: haloacid d 91.8 0.14 2.9E-06 46.7 3.0 33 302-337 182-214 (215)
151 PRK08942 D,D-heptose 1,7-bisph 91.6 0.59 1.3E-05 42.1 6.9 48 117-164 3-55 (181)
152 PRK13478 phosphonoacetaldehyde 91.6 0.5 1.1E-05 45.3 6.8 69 300-375 160-258 (267)
153 TIGR03333 salvage_mtnX 2-hydro 91.5 0.24 5.1E-06 46.0 4.3 35 139-173 70-105 (214)
154 PRK08238 hypothetical protein; 91.5 0.37 8E-06 50.6 6.1 47 139-185 72-121 (479)
155 PRK15122 magnesium-transportin 91.4 0.35 7.6E-06 54.8 6.3 60 288-362 617-678 (903)
156 TIGR01680 Veg_Stor_Prot vegeta 91.2 0.46 9.9E-06 46.0 6.0 51 117-167 101-174 (275)
157 PRK06769 hypothetical protein; 90.7 0.42 9E-06 43.0 4.9 65 300-371 95-171 (173)
158 PRK10517 magnesium-transportin 90.7 0.45 9.7E-06 53.9 6.2 59 289-362 618-678 (902)
159 PRK14988 GMP/IMP nucleotidase; 90.6 0.53 1.1E-05 44.1 5.7 68 300-375 151-222 (224)
160 TIGR01517 ATPase-IIB_Ca plasma 90.3 0.4 8.6E-06 54.6 5.4 68 289-371 649-721 (941)
161 PRK10725 fructose-1-P/6-phosph 90.2 0.17 3.7E-06 45.4 2.0 36 299-337 143-178 (188)
162 COG0241 HisB Histidinol phosph 90.1 0.29 6.2E-06 44.7 3.3 45 117-161 5-54 (181)
163 TIGR01106 ATPase-IIC_X-K sodiu 90.1 0.46 1E-05 54.4 5.7 58 291-363 666-726 (997)
164 TIGR03351 PhnX-like phosphonat 89.9 0.5 1.1E-05 43.6 4.9 65 299-371 146-219 (220)
165 COG4359 Uncharacterized conser 89.8 0.74 1.6E-05 42.0 5.6 36 293-336 142-177 (220)
166 TIGR01489 DKMTPPase-SF 2,3-dik 89.7 0.37 8.1E-06 42.9 3.7 15 117-131 1-15 (188)
167 TIGR01657 P-ATPase-V P-type AT 89.1 0.49 1.1E-05 54.5 5.1 69 289-372 782-852 (1054)
168 TIGR01422 phosphonatase phosph 89.1 0.95 2.1E-05 42.9 6.3 65 300-371 158-252 (253)
169 TIGR02254 YjjG/YfnB HAD superf 89.0 0.92 2E-05 41.6 5.9 65 299-371 153-224 (224)
170 PRK11587 putative phosphatase; 88.6 0.23 4.9E-06 46.1 1.6 60 300-367 140-203 (218)
171 PRK13288 pyrophosphatase PpaX; 88.5 0.26 5.6E-06 45.4 1.9 14 117-130 3-16 (214)
172 TIGR02253 CTE7 HAD superfamily 88.3 0.64 1.4E-05 42.8 4.4 60 300-367 152-220 (221)
173 TIGR02252 DREG-2 REG-2-like, H 88.2 0.29 6.3E-06 44.6 2.0 34 301-337 163-197 (203)
174 PLN02575 haloacid dehalogenase 88.1 1.5 3.3E-05 44.6 7.3 73 299-378 273-349 (381)
175 TIGR01548 HAD-SF-IA-hyp1 haloa 88.0 0.24 5.2E-06 45.1 1.3 32 300-334 163-194 (197)
176 PRK10748 flavin mononucleotide 87.4 0.37 8E-06 45.5 2.2 63 300-370 165-237 (238)
177 PRK11590 hypothetical protein; 87.4 0.7 1.5E-05 42.8 4.0 43 297-350 161-203 (211)
178 PLN02770 haloacid dehalogenase 87.2 0.32 7E-06 46.2 1.8 60 299-366 165-230 (248)
179 KOG3120 Predicted haloacid deh 87.2 1.1 2.5E-05 41.9 5.2 92 285-380 150-252 (256)
180 PRK11590 hypothetical protein; 87.0 0.35 7.6E-06 44.8 1.8 15 116-130 5-19 (211)
181 PRK09449 dUMP phosphatase; Pro 86.9 2 4.3E-05 39.7 6.9 65 301-372 153-223 (224)
182 PF12689 Acid_PPase: Acid Phos 86.9 1.1 2.5E-05 40.3 4.9 58 117-174 3-82 (169)
183 PRK11587 putative phosphatase; 86.6 1.8 3.8E-05 40.1 6.3 30 116-154 2-31 (218)
184 TIGR01545 YfhB_g-proteo haloac 86.4 0.79 1.7E-05 42.6 3.8 43 297-350 160-202 (210)
185 TIGR01993 Pyr-5-nucltdase pyri 86.3 0.62 1.3E-05 41.8 3.0 35 300-337 143-177 (184)
186 TIGR02009 PGMB-YQAB-SF beta-ph 86.2 0.36 7.7E-06 43.1 1.3 35 300-337 144-178 (185)
187 TIGR00213 GmhB_yaeD D,D-heptos 85.9 1.2 2.7E-05 39.8 4.7 48 118-165 2-53 (176)
188 KOG0202 Ca2+ transporting ATPa 85.5 1.6 3.5E-05 48.1 6.0 97 289-400 658-789 (972)
189 TIGR03351 PhnX-like phosphonat 85.4 0.5 1.1E-05 43.6 2.0 28 118-154 2-29 (220)
190 TIGR01422 phosphonatase phosph 85.3 0.75 1.6E-05 43.6 3.2 14 117-130 2-15 (253)
191 PRK10826 2-deoxyglucose-6-phos 85.2 0.44 9.6E-06 44.2 1.5 17 114-130 4-20 (222)
192 PLN03243 haloacid dehalogenase 84.6 2.5 5.4E-05 40.7 6.4 63 300-370 167-233 (260)
193 TIGR02253 CTE7 HAD superfamily 84.4 2.1 4.5E-05 39.4 5.6 33 117-154 2-34 (221)
194 TIGR02254 YjjG/YfnB HAD superf 84.2 0.58 1.3E-05 43.0 1.8 36 302-338 124-162 (224)
195 PLN02779 haloacid dehalogenase 83.8 0.54 1.2E-05 45.9 1.5 60 300-367 204-268 (286)
196 PRK13225 phosphoglycolate phos 83.7 0.44 9.6E-06 46.2 0.8 33 113-154 58-90 (273)
197 PRK13478 phosphonoacetaldehyde 83.1 1 2.2E-05 43.2 3.0 15 116-130 3-17 (267)
198 PLN02770 haloacid dehalogenase 83.0 2.3 4.9E-05 40.4 5.4 48 303-352 137-191 (248)
199 KOG0207 Cation transport ATPas 82.8 2.3 5E-05 47.3 5.8 69 289-372 766-838 (951)
200 COG0546 Gph Predicted phosphat 82.8 0.71 1.5E-05 43.0 1.8 48 301-351 116-171 (220)
201 PHA02597 30.2 hypothetical pro 82.7 0.61 1.3E-05 42.3 1.3 61 300-368 132-195 (197)
202 COG0474 MgtA Cation transport 82.7 1.2 2.5E-05 50.7 3.7 60 288-362 618-680 (917)
203 PRK13226 phosphoglycolate phos 82.1 0.57 1.2E-05 43.9 0.9 28 118-154 13-40 (229)
204 TIGR01454 AHBA_synth_RP 3-amin 81.9 0.57 1.2E-05 42.8 0.7 25 120-153 1-25 (205)
205 TIGR01549 HAD-SF-IA-v1 haloaci 81.8 0.62 1.3E-05 40.3 0.9 34 299-336 119-152 (154)
206 PRK10563 6-phosphogluconate ph 81.5 0.91 2E-05 41.9 2.0 41 299-347 143-183 (221)
207 PRK13223 phosphoglycolate phos 81.4 0.75 1.6E-05 44.5 1.4 29 117-154 13-41 (272)
208 PF05152 DUF705: Protein of un 81.3 6.4 0.00014 38.4 7.6 72 112-186 117-194 (297)
209 PLN02779 haloacid dehalogenase 81.2 2.8 6.2E-05 40.8 5.4 15 116-130 39-53 (286)
210 TIGR01545 YfhB_g-proteo haloac 81.2 1.3 2.8E-05 41.2 2.9 15 116-130 4-18 (210)
211 TIGR01990 bPGM beta-phosphoglu 81.0 0.69 1.5E-05 41.2 1.0 36 299-337 142-177 (185)
212 TIGR01458 HAD-SF-IIA-hyp3 HAD- 80.9 5.4 0.00012 38.1 7.2 48 118-170 2-53 (257)
213 PRK14988 GMP/IMP nucleotidase; 80.8 0.8 1.7E-05 42.9 1.4 14 117-130 10-23 (224)
214 COG4087 Soluble P-type ATPase 80.8 1.5 3.3E-05 37.8 2.8 49 120-174 17-65 (152)
215 TIGR01494 ATPase_P-type ATPase 80.7 1.8 4E-05 45.5 4.2 57 289-363 387-443 (499)
216 TIGR01544 HAD-SF-IE haloacid d 80.1 1.7 3.6E-05 42.4 3.3 55 117-171 22-89 (277)
217 TIGR01493 HAD-SF-IA-v2 Haloaci 80.0 0.7 1.5E-05 40.9 0.7 30 301-333 142-171 (175)
218 PRK13222 phosphoglycolate phos 79.7 0.94 2E-05 41.7 1.4 16 115-130 4-19 (226)
219 COG0637 Predicted phosphatase/ 79.6 1.1 2.3E-05 42.0 1.8 33 302-337 146-178 (221)
220 TIGR01449 PGP_bact 2-phosphogl 78.9 0.79 1.7E-05 41.9 0.6 26 120-154 1-26 (213)
221 PRK06698 bifunctional 5'-methy 78.6 5.5 0.00012 41.5 6.9 65 300-374 387-456 (459)
222 KOG1615 Phosphoserine phosphat 78.5 1.5 3.2E-05 40.4 2.3 39 293-337 154-192 (227)
223 PLN02645 phosphoglycolate phos 78.2 7.4 0.00016 38.3 7.4 50 117-172 28-78 (311)
224 PF06888 Put_Phosphatase: Puta 78.0 4.1 8.8E-05 38.7 5.2 36 138-173 70-108 (234)
225 PLN03243 haloacid dehalogenase 77.7 2.3 5.1E-05 40.9 3.5 49 302-352 137-192 (260)
226 KOG0206 P-type ATPase [General 77.2 2.2 4.8E-05 49.1 3.6 33 299-337 781-813 (1151)
227 PRK06698 bifunctional 5'-methy 75.9 1.3 2.9E-05 46.1 1.3 29 118-151 242-270 (459)
228 PRK09449 dUMP phosphatase; Pro 75.8 1.5 3.1E-05 40.6 1.5 35 302-338 122-160 (224)
229 TIGR01261 hisB_Nterm histidino 75.7 2.3 4.9E-05 37.9 2.6 47 117-163 1-54 (161)
230 TIGR01662 HAD-SF-IIIA HAD-supe 74.0 4.7 0.0001 33.9 4.1 36 299-337 86-123 (132)
231 TIGR01428 HAD_type_II 2-haloal 74.0 1.8 3.8E-05 39.3 1.5 35 300-337 150-184 (198)
232 KOG1615 Phosphoserine phosphat 73.1 6.1 0.00013 36.5 4.7 35 138-172 87-122 (227)
233 TIGR01990 bPGM beta-phosphoglu 73.0 3.6 7.7E-05 36.5 3.3 28 119-155 1-28 (185)
234 TIGR01452 PGP_euk phosphoglyco 72.4 4.8 0.0001 38.9 4.2 42 301-350 205-248 (279)
235 PLN02940 riboflavin kinase 72.1 1.9 4.1E-05 44.0 1.4 61 299-367 151-216 (382)
236 TIGR01681 HAD-SF-IIIC HAD-supe 71.3 5.2 0.00011 33.9 3.7 35 299-336 90-126 (128)
237 PF12710 HAD: haloacid dehalog 70.8 2.3 4.9E-05 37.9 1.5 11 120-130 1-11 (192)
238 PRK10748 flavin mononucleotide 70.8 11 0.00025 35.3 6.3 15 116-130 9-23 (238)
239 TIGR02247 HAD-1A3-hyp Epoxide 70.4 2.4 5.3E-05 38.7 1.6 34 301-337 155-188 (211)
240 KOG0203 Na+/K+ ATPase, alpha s 69.7 7.8 0.00017 43.0 5.4 37 320-361 707-746 (1019)
241 PRK10444 UMP phosphatase; Prov 69.6 13 0.00029 35.3 6.6 62 299-367 175-245 (248)
242 TIGR01656 Histidinol-ppas hist 69.5 4.1 8.9E-05 35.3 2.8 36 299-337 102-137 (147)
243 PF00702 Hydrolase: haloacid d 67.8 2.9 6.3E-05 37.8 1.5 49 299-351 152-204 (215)
244 COG1011 Predicted hydrolase (H 67.8 16 0.00035 33.4 6.6 65 301-373 157-228 (229)
245 PLN02940 riboflavin kinase 67.7 9.9 0.00021 38.7 5.5 30 116-154 10-39 (382)
246 KOG3120 Predicted haloacid deh 67.7 13 0.00028 35.1 5.6 60 113-172 9-119 (256)
247 COG3700 AphA Acid phosphatase 67.7 15 0.00032 33.6 5.8 81 92-172 37-148 (237)
248 TIGR02009 PGMB-YQAB-SF beta-ph 67.1 6.1 0.00013 35.0 3.4 28 118-154 2-29 (185)
249 COG1011 Predicted hydrolase (H 66.8 3.5 7.7E-05 37.9 1.9 36 303-339 127-165 (229)
250 KOG1618 Predicted phosphatase 65.9 7.7 0.00017 38.4 4.0 41 115-161 33-78 (389)
251 PF11019 DUF2608: Protein of u 65.6 24 0.00052 33.8 7.4 37 297-336 160-196 (252)
252 TIGR01509 HAD-SF-IA-v3 haloaci 65.1 2.9 6.2E-05 36.9 0.9 34 301-337 143-176 (183)
253 PF13419 HAD_2: Haloacid dehal 65.1 7.3 0.00016 33.5 3.5 36 299-337 134-169 (176)
254 PRK09456 ?-D-glucose-1-phospha 65.0 8.4 0.00018 35.0 4.0 35 300-337 143-177 (199)
255 PHA02597 30.2 hypothetical pro 64.3 10 0.00022 34.2 4.4 14 117-130 2-15 (197)
256 PRK08238 hypothetical protein; 64.2 6.2 0.00013 41.5 3.3 41 299-352 128-168 (479)
257 TIGR01509 HAD-SF-IA-v3 haloaci 64.2 12 0.00025 32.9 4.7 11 120-130 2-12 (183)
258 PRK10563 6-phosphogluconate ph 64.0 6.3 0.00014 36.2 3.0 49 303-352 114-169 (221)
259 TIGR01548 HAD-SF-IA-hyp1 haloa 63.4 5.7 0.00012 36.0 2.5 35 302-338 134-171 (197)
260 TIGR01549 HAD-SF-IA-v1 haloaci 63.2 6.7 0.00014 33.7 2.9 27 119-154 1-27 (154)
261 KOG3109 Haloacid dehalogenase- 63.0 7.6 0.00017 36.5 3.3 54 301-361 163-217 (244)
262 COG2503 Predicted secreted aci 63.0 14 0.00031 35.2 5.1 43 89-131 50-93 (274)
263 PLN02811 hydrolase 62.7 13 0.00028 34.3 4.9 44 300-350 139-185 (220)
264 TIGR01428 HAD_type_II 2-haloal 59.9 10 0.00022 34.2 3.5 36 302-338 120-158 (198)
265 PRK09456 ?-D-glucose-1-phospha 59.5 5.3 0.00012 36.3 1.6 13 119-131 2-14 (199)
266 COG4483 Uncharacterized protei 58.6 6.2 0.00013 29.6 1.5 27 303-336 6-32 (68)
267 COG3882 FkbH Predicted enzyme 57.7 31 0.00068 36.2 6.8 69 106-174 210-291 (574)
268 PF06941 NT5C: 5' nucleotidase 57.5 6 0.00013 35.9 1.6 14 117-130 1-15 (191)
269 PRK10725 fructose-1-P/6-phosph 57.1 12 0.00026 33.3 3.5 31 115-154 3-33 (188)
270 TIGR02399 salt_tol_Pase glucos 57.1 17 0.00036 36.4 4.6 49 113-163 4-52 (389)
271 TIGR01668 YqeG_hyp_ppase HAD s 56.8 16 0.00034 32.6 4.2 44 299-350 92-137 (170)
272 PLN02177 glycerol-3-phosphate 55.5 13 0.00028 39.4 3.9 41 298-350 175-215 (497)
273 TIGR02247 HAD-1A3-hyp Epoxide 54.9 23 0.0005 32.2 5.1 13 118-130 3-15 (211)
274 TIGR01686 FkbH FkbH-like domai 54.1 22 0.00049 35.1 5.2 36 299-337 87-122 (320)
275 PLN02919 haloacid dehalogenase 53.9 5.8 0.00013 45.9 1.1 60 300-367 220-285 (1057)
276 TIGR01493 HAD-SF-IA-v2 Haloaci 53.5 12 0.00025 32.9 2.8 27 119-154 1-27 (175)
277 TIGR02252 DREG-2 REG-2-like, H 52.7 15 0.00032 33.2 3.4 13 118-130 1-13 (203)
278 TIGR01993 Pyr-5-nucltdase pyri 51.9 18 0.00038 32.2 3.7 37 302-339 109-152 (184)
279 PF09949 DUF2183: Uncharacteri 50.0 54 0.0012 26.8 5.9 36 299-339 50-86 (100)
280 cd00218 GlcAT-I Beta1,3-glucur 49.8 31 0.00068 32.5 5.0 45 292-340 72-119 (223)
281 KOG2134 Polynucleotide kinase 49.4 13 0.00029 37.7 2.6 49 113-161 71-127 (422)
282 TIGR01511 ATPase-IB1_Cu copper 48.9 27 0.00058 37.5 5.1 57 116-174 384-441 (562)
283 PF04312 DUF460: Protein of un 46.9 20 0.00043 31.2 3.0 62 119-193 45-109 (138)
284 TIGR01691 enolase-ppase 2,3-di 46.6 19 0.00042 33.7 3.2 36 299-337 153-188 (220)
285 COG4359 Uncharacterized conser 46.6 12 0.00027 34.2 1.8 15 116-130 2-16 (220)
286 PF09506 Salt_tol_Pase: Glucos 46.0 31 0.00068 34.4 4.5 46 116-163 1-46 (381)
287 PLN02177 glycerol-3-phosphate 45.2 14 0.00031 39.1 2.2 15 117-131 22-36 (497)
288 KOG2467 Glycine/serine hydroxy 45.1 59 0.0013 33.1 6.3 87 280-383 341-432 (477)
289 PF03360 Glyco_transf_43: Glyc 44.9 30 0.00066 32.2 4.1 43 294-340 56-101 (207)
290 TIGR01456 CECR5 HAD-superfamil 44.6 65 0.0014 31.8 6.8 46 119-170 2-55 (321)
291 smart00577 CPDc catalytic doma 44.2 12 0.00025 32.6 1.2 30 304-336 104-133 (148)
292 PF06014 DUF910: Bacterial pro 43.2 8.6 0.00019 28.7 0.2 27 303-336 6-32 (62)
293 TIGR01685 MDP-1 magnesium-depe 42.7 41 0.00089 30.4 4.6 23 312-337 127-149 (174)
294 COG4996 Predicted phosphatase 42.1 30 0.00064 30.1 3.3 15 118-132 1-15 (164)
295 PHA02530 pseT polynucleotide k 41.9 27 0.00058 33.7 3.5 36 299-337 252-288 (300)
296 PRK05446 imidazole glycerol-ph 38.3 32 0.0007 34.7 3.5 36 299-337 105-140 (354)
297 KOG2116 Protein involved in pl 38.3 50 0.0011 35.9 4.9 79 115-193 528-617 (738)
298 PF11019 DUF2608: Protein of u 36.2 44 0.00096 32.0 3.9 28 104-131 5-34 (252)
299 cd04256 AAK_P5CS_ProBA AAK_P5C 36.1 1.1E+02 0.0024 29.8 6.7 24 112-135 190-213 (284)
300 PF13382 Adenine_deam_C: Adeni 35.1 1.7E+02 0.0037 26.3 7.3 56 320-380 67-133 (171)
301 PF06342 DUF1057: Alpha/beta h 34.3 68 0.0015 31.5 4.8 68 277-352 69-136 (297)
302 PRK11033 zntA zinc/cadmium/mer 34.2 70 0.0015 35.6 5.6 64 109-174 540-604 (741)
303 PLN02499 glycerol-3-phosphate 33.7 36 0.00077 36.0 3.0 24 117-145 8-31 (498)
304 PLN02919 haloacid dehalogenase 33.2 69 0.0015 37.3 5.5 29 117-154 75-103 (1057)
305 TIGR01664 DNA-3'-Pase DNA 3'-p 32.6 44 0.00096 29.7 3.1 33 301-336 111-153 (166)
306 KOG1359 Glycine C-acetyltransf 32.3 1.1E+02 0.0024 30.4 5.8 70 108-191 185-277 (417)
307 PRK04128 1-(5-phosphoribosyl)- 31.9 87 0.0019 29.4 5.1 48 116-173 43-93 (228)
308 TIGR00071 hisT_truA pseudourid 31.7 55 0.0012 30.8 3.7 55 117-171 2-57 (227)
309 KOG0208 Cation transport ATPas 31.1 46 0.001 37.9 3.4 62 299-372 840-903 (1140)
310 PLN02458 transferase, transfer 30.9 77 0.0017 31.7 4.6 35 300-340 190-226 (346)
311 TIGR00735 hisF imidazoleglycer 30.5 1.8E+02 0.0039 27.6 7.2 82 104-185 111-208 (254)
312 TIGR01497 kdpB K+-transporting 30.3 86 0.0019 34.6 5.4 61 111-173 420-481 (675)
313 PTZ00489 glutamate 5-kinase; P 30.2 1.9E+02 0.004 28.0 7.2 19 112-130 159-177 (264)
314 COG5083 SMP2 Uncharacterized p 30.0 28 0.0006 36.1 1.4 17 114-130 372-388 (580)
315 PRK10671 copA copper exporting 29.6 1.4E+02 0.0031 33.7 7.1 79 93-173 605-685 (834)
316 smart00775 LNS2 LNS2 domain. T 28.8 89 0.0019 27.5 4.3 37 299-337 102-138 (157)
317 KOG1476 Beta-1,3-glucuronyltra 28.4 1.2E+02 0.0027 30.0 5.5 47 301-350 165-215 (330)
318 COG0101 TruA Pseudouridylate s 27.6 87 0.0019 30.4 4.3 54 117-170 3-57 (266)
319 PF13419 HAD_2: Haloacid dehal 26.9 60 0.0013 27.6 2.9 35 139-173 77-112 (176)
320 cd04239 AAK_UMPK-like AAK_UMPK 26.5 1.5E+02 0.0032 27.6 5.7 63 111-173 143-220 (229)
321 TIGR01460 HAD-SF-IIA Haloacid 26.3 95 0.0021 29.1 4.3 36 299-337 189-226 (236)
322 PRK10886 DnaA initiator-associ 25.8 2.5E+02 0.0053 25.8 6.8 53 108-173 102-155 (196)
323 KOG3085 Predicted hydrolase (H 25.7 87 0.0019 29.8 3.9 44 302-352 172-216 (237)
324 PRK12314 gamma-glutamyl kinase 25.4 2.3E+02 0.0049 27.2 6.9 20 111-130 165-184 (266)
325 KOG0209 P-type ATPase [Inorgan 25.0 52 0.0011 36.9 2.5 29 320-353 808-836 (1160)
326 KOG4549 Magnesium-dependent ph 24.2 2E+02 0.0044 24.9 5.3 54 117-170 18-76 (144)
327 PRK14558 pyrH uridylate kinase 24.1 1.7E+02 0.0037 27.3 5.6 63 111-173 143-220 (231)
328 COG1608 Predicted archaeal kin 24.1 3E+02 0.0065 26.4 7.1 20 111-130 158-177 (252)
329 TIGR01512 ATPase-IB2_Cd heavy 23.7 1.1E+02 0.0023 32.7 4.6 55 117-173 342-398 (536)
330 KOG1605 TFIIF-interacting CTD 23.3 48 0.001 32.1 1.7 17 114-130 86-102 (262)
331 TIGR01490 HAD-SF-IB-hyp1 HAD-s 23.2 1.1E+02 0.0024 27.3 4.0 35 139-173 87-122 (202)
332 TIGR01106 ATPase-IIC_X-K sodiu 22.7 95 0.0021 35.9 4.2 35 139-173 568-603 (997)
333 KOG2882 p-Nitrophenyl phosphat 22.4 1.5E+02 0.0033 29.3 4.9 48 119-172 24-72 (306)
334 COG2179 Predicted hydrolase of 22.3 71 0.0015 28.8 2.4 43 301-350 96-139 (175)
335 cd04242 AAK_G5K_ProB AAK_G5K_P 22.2 1.3E+02 0.0029 28.5 4.5 20 111-130 153-172 (251)
336 PRK14556 pyrH uridylate kinase 21.7 2E+02 0.0044 27.6 5.6 63 111-173 161-238 (249)
337 TIGR01672 AphA HAD superfamily 21.7 67 0.0014 30.5 2.3 17 321-337 187-203 (237)
338 PF06189 5-nucleotidase: 5'-nu 21.7 1.7E+02 0.0036 28.4 4.9 58 115-172 119-204 (264)
339 CHL00202 argB acetylglutamate 21.6 2.4E+02 0.0051 27.4 6.2 56 111-171 191-246 (284)
340 TIGR01459 HAD-SF-IIA-hyp4 HAD- 21.5 1.4E+02 0.0031 27.8 4.6 36 300-337 197-233 (242)
341 PRK14557 pyrH uridylate kinase 21.1 3.4E+02 0.0073 25.8 7.0 73 112-190 151-239 (247)
342 TIGR01092 P5CS delta l-pyrroli 21.0 2.3E+02 0.005 31.5 6.7 62 111-173 178-265 (715)
343 cd02966 TlpA_like_family TlpA- 21.0 2.2E+02 0.0048 21.7 5.0 79 94-187 29-111 (116)
344 COG0647 NagD Predicted sugar p 20.9 1.8E+02 0.0039 28.3 5.1 42 302-351 194-237 (269)
345 PRK13587 1-(5-phosphoribosyl)- 20.3 2.9E+02 0.0062 26.0 6.3 60 101-172 146-211 (234)
346 PF11071 DUF2872: Protein of u 20.3 33 0.00072 29.6 -0.1 70 299-375 56-140 (141)
No 1
>PLN02580 trehalose-phosphatase
Probab=100.00 E-value=2.3e-83 Score=638.10 Aligned_cols=381 Identities=83% Similarity=1.291 Sum_probs=347.3
Q ss_pred CCCCCCCCCCcccCCcccccccccccCC-CccCCCCCCCC-CceeecCCCCCCCcchhhhccHHHHHhcCCchhhhhccc
Q 015439 1 MELKSNQASPVLTDPASLNKSKLGIHSR-LPYSQPGASFS-GKCIAIPRKKPGKLDDVRSNGWLDAMKSSSPPRKKLIKD 78 (406)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (406)
|||||||+|||||||+|++++|+|++++ |+||..+++|+ |.++.+||||++.+|++++++|+|+|+++||++++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (384)
T PLN02580 1 MDLKSNHSSPVLTDPAPINKSRLGIRSNLLPYSSAGASFSSNLFLTIPRKKTGKLDDVRSNGWLDAMKSSSPPRKKLNKD 80 (384)
T ss_pred CCcccCCCCcccCCCccccccccccccccccccCCcCcCCCCceeeccccCCCccccccccchhhhhhccCCCccccccc
Confidence 9999999999999999999999999999 99999999985 999999999999999999999999999999999876666
Q ss_pred cCCCCCcccchhhhhhHHhhCCccchhHHHHHHHhccCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcCCEE
Q 015439 79 FNADVGLDDFDIAYCSWMLKYPSALKYFEKIMSEAKKKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYFPTA 158 (406)
Q Consensus 79 ~~~~~~~~~~~~~~~~w~~~~p~~L~~f~~i~~~~~~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~~v~ 158 (406)
++..+.+...+.+|.+|+.+|||||.+|++|.+|+++++++|||||||||+|++++|+.+.++++++++|++|+++++|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~p~al~~~~~~~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~~~VA 160 (384)
T PLN02580 81 FNVELASPDTDFAYRTWMLKYPSALTSFEQIANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKYFPTA 160 (384)
T ss_pred cccccccccchHHHHHHHHhCcHHHHHHHHHHHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhCCCEE
Confidence 55555566778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCChhhHHHHhCCcCceEEccCCceEeCCCCCcccCCCCCCcccccccCCccccccccccccchHHHHHHHHHHHhh
Q 015439 159 IITGRSRDKVYELVGLTELYYAGSHGMDIMGPVDHTVSDDHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENTK 238 (406)
Q Consensus 159 I~SGR~~~~l~~~~~l~~~~li~~nGa~I~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~~ 238 (406)
|+|||+++.+.+++++++++|+|+||++++.+.+......|..+++..+..|++..+++++.+|+++++++++.+.++++
T Consensus 161 IVSGR~~~~L~~~l~~~~l~laGsHG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~ 240 (384)
T PLN02580 161 IISGRSRDKVYELVGLTELYYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTK 240 (384)
T ss_pred EEeCCCHHHHHHHhCCCCccEEEeCCceeecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhc
Confidence 99999999999999998999999999999987654433457666655555565555778888899999999999998889
Q ss_pred hccCceeeecceeEEEEeeecCCCCHHHHHHHHHHHHhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCC
Q 015439 239 SIKGAKVENHKFCVSVHYRNVDEKSWPTIAQCVHDVLKDYPRLRLTHGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDD 318 (406)
Q Consensus 239 ~~~g~~vE~~~~~l~~h~r~~d~~~~~~l~~~l~~~l~~~p~l~v~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~ 318 (406)
++||++||+|++|++||||+++++.++.+.+.+..+++++|+++++.|++++||+|.++||||.|+++|++.+|++..+.
T Consensus 241 ~~pGs~VE~K~~svavHYR~a~~~~~~~~~~~l~~~l~~~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~ 320 (384)
T PLN02580 241 DIKGAKVENHKFCVSVHYRNVDEKNWPLVAQCVHDVLKKYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDD 320 (384)
T ss_pred cCCCCEEEecCcEEEEEeCCCCchHHHHHHHHHHHHHHhCCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhcCCCcccc
Confidence 99999999999999999999988878888888888888888899999999999999339999999999999999886543
Q ss_pred ccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCCCccceEEeCCHHHHHHHHHHHHHhhhhh
Q 015439 319 VLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPKETKAFYSLRDPSEVQEFLLSLVRWKKLE 381 (406)
Q Consensus 319 ~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~~t~A~y~l~~~~eV~~fL~~L~~~~~~~ 381 (406)
..++||||+.|||+||++++..++|+||+|+|+++++.|+|+|+++++|.+||+.|+.|++.+
T Consensus 321 ~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~~~~ 383 (384)
T PLN02580 321 VLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWKKSE 383 (384)
T ss_pred eeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhhhcC
Confidence 457999999999999999987667999999999999999999999999999999999999764
No 2
>PLN03017 trehalose-phosphatase
Probab=100.00 E-value=5.3e-64 Score=495.29 Aligned_cols=325 Identities=57% Similarity=0.969 Sum_probs=283.9
Q ss_pred ceeecCCCCC-CC-----cchhhhccHHHHHhcCCchhhhhccccCCCCCcccchhhhhhHHhhCCccchhHHHHHHHhc
Q 015439 41 KCIAIPRKKP-GK-----LDDVRSNGWLDAMKSSSPPRKKLIKDFNADVGLDDFDIAYCSWMLKYPSALKYFEKIMSEAK 114 (406)
Q Consensus 41 ~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~p~~L~~f~~i~~~~~ 114 (406)
..+..|+|+. .+ ++++++++|+|+|++|||+++|.... ....+..|++|+.+|||||+.|++|+++++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~w~~~~psal~~~~~~~~~~~ 108 (366)
T PLN03017 35 GLISISKKKLLKNIDIINGGGQRINAWVDSMRASSPTHLKSLPS------SISSQQQLNSWIMQHPSALEMFEQIMEASR 108 (366)
T ss_pred ccCCcchhcchhhhccccccccccchHHHHHhccCCCccccccc------cccchhhhhHHHhhCChHHHHHHHHHHHhc
Confidence 3466788874 32 34578999999999999998764332 122467899999999999999999999999
Q ss_pred cCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcCCEEEEcCCChhhHHHHhCCcCceEEccCCceEeCCCCCc
Q 015439 115 KKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYFPTAIITGRSRDKVYELVGLTELYYAGSHGMDIMGPVDHT 194 (406)
Q Consensus 115 ~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~l~~~~li~~nGa~I~~~~~~~ 194 (406)
+++++||+||||||+|++++|+.+.++++++++|++|++.++|+|+|||++..+.+++++.+++|+|+||++|+.+.+..
T Consensus 109 ~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~l~~l~l~g~hGa~i~~p~~~~ 188 (366)
T PLN03017 109 GKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGF 188 (366)
T ss_pred CCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhhcccCceEEEcCCcEEecCCCcc
Confidence 99999999999999999999988899999999999999667999999999999999988888999999999999876432
Q ss_pred ccCCCCCCcccccccCCccccccccccccchHHHHHHHHHHHhhhccCceeeecceeEEEEeeecCCCCHHHHHHHHHHH
Q 015439 195 VSDDHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENTKSIKGAKVENHKFCVSVHYRNVDEKSWPTIAQCVHDV 274 (406)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~~~~~g~~vE~~~~~l~~h~r~~d~~~~~~l~~~l~~~ 274 (406)
. .+ ..+++..+++++.+|+++++++++.+.++++++||++||+|++|++||||++++..|.++.+.+..+
T Consensus 189 ~--~~--------~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~~~l~~~~~~v 258 (366)
T PLN03017 189 S--RH--------KRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSV 258 (366)
T ss_pred e--ec--------cccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence 0 11 1112223466777789999999999988899999999999999999999999888778888889999
Q ss_pred HhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCCC
Q 015439 275 LKDYPRLRLTHGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPKE 354 (406)
Q Consensus 275 l~~~p~l~v~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~~ 354 (406)
++++|+++++.|++++||+|.++||||+|+++|++.+|+...++++++|||||.+||+||+++++.+.|+||.||..+++
T Consensus 259 l~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k~ 338 (366)
T PLN03017 259 LKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPKD 338 (366)
T ss_pred HHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCCC
Confidence 99998899999999999999669999999999999999886656789999999999999999987767999999988888
Q ss_pred ccceEEeCCHHHHHHHHHHHHHhhhhh
Q 015439 355 TKAFYSLRDPSEVQEFLLSLVRWKKLE 381 (406)
Q Consensus 355 t~A~y~l~~~~eV~~fL~~L~~~~~~~ 381 (406)
|.|.|+|+++++|++||++|+.|++..
T Consensus 339 T~A~y~L~dp~eV~~fL~~L~~~~~~~ 365 (366)
T PLN03017 339 TDASYSLQDPSEVMDFLARLVEWKQMQ 365 (366)
T ss_pred CcceEeCCCHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999764
No 3
>PLN02151 trehalose-phosphatase
Probab=100.00 E-value=3.3e-61 Score=474.16 Aligned_cols=304 Identities=59% Similarity=0.969 Sum_probs=270.2
Q ss_pred hhhccHHHHHhcCCchhhhhccccCCCCCcccchhhhhhHHhhCCccchhHHHHHHHhccCCEEEEEecCCccCCCCCCC
Q 015439 56 VRSNGWLDAMKSSSPPRKKLIKDFNADVGLDDFDIAYCSWMLKYPSALKYFEKIMSEAKKKKIAIFSDYDGTLSPIVDDP 135 (406)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~p~~L~~f~~i~~~~~~k~~lI~lD~DGTL~~~~~~p 135 (406)
.++++|+|+|++|||++.+. ..+|.+|+.+|||||++|++|++.+++++++||+||||||+|++++|
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~w~~~~p~a~~~~~~~~~~~~~~~~ll~lDyDGTL~PIv~~P 116 (354)
T PLN02151 50 GLIRSWVDSMRACSPTRPKS-------------FNKQSCWIKEHPSALNMFEEILHKSEGKQIVMFLDYDGTLSPIVDDP 116 (354)
T ss_pred cccchHHHHHhccCCCcccc-------------hhhHHHHHHhCChHHHHHHHHHHhhcCCceEEEEecCccCCCCCCCc
Confidence 35789999999999998541 24789999999999999999999999999999999999999999999
Q ss_pred CccCCChhHHHHHHHHHhcCCEEEEcCCChhhHHHHhCCcCceEEccCCceEeCCCCCcccCCCCCCcccccccCCcccc
Q 015439 136 DRAIMSDGMRSAVRNVAKYFPTAIITGRSRDKVYELVGLTELYYAGSHGMDIMGPVDHTVSDDHPNSIKSTDQQGKEVNL 215 (406)
Q Consensus 136 ~~~~~s~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~l~~~~li~~nGa~I~~~~~~~~~~~~~~~~~~~~~~~~~~~l 215 (406)
+.+.++++++++|++|++.++|+|+|||+++.+.+++++++++|+|+||++++.+.+.. .|.. .++...
T Consensus 117 ~~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~~~~l~laGsHG~e~~~p~~g~---~~~~--------~~~~~~ 185 (354)
T PLN02151 117 DRAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVKLTELYYAGSHGMDIKGPEQGS---KYKK--------ENQSLL 185 (354)
T ss_pred ccccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcCCccceEEEeCCceeecCCCCc---cccc--------cccccc
Confidence 99999999999999999878999999999999999999989999999999998775321 2211 111234
Q ss_pred ccccccccchHHHHHHHHHHHhhhccCceeeecceeEEEEeeecCCCCHHHHHHHHHHHHhhCCCeEEEecCeEEEEEcC
Q 015439 216 FQPAREFLPMIDEVFRTLVENTKSIKGAKVENHKFCVSVHYRNVDEKSWPTIAQCVHDVLKDYPRLRLTHGRKVLEIRPV 295 (406)
Q Consensus 216 ~~~a~~~~~~i~~v~~~l~~~~~~~~g~~vE~~~~~l~~h~r~~d~~~~~~l~~~l~~~l~~~p~l~v~~g~~~lEI~P~ 295 (406)
++++.+|.+.++++++.+.+.++++||+++|+|++|++||||+++++.+.++.+.+.++++++|++++++|++++||+|.
T Consensus 186 ~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~ 265 (354)
T PLN02151 186 CQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPI 265 (354)
T ss_pred cccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCC
Confidence 56667788999999999988888999999999999999999999887777778888888989888999999999999996
Q ss_pred CCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCCCccceEEeCCHHHHHHHHHHHH
Q 015439 296 IDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPKETKAFYSLRDPSEVQEFLLSLV 375 (406)
Q Consensus 296 ~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~~t~A~y~l~~~~eV~~fL~~L~ 375 (406)
++||||+|+++|++.+++....+++++|||||.|||+||++++..++|+||.|+..+++|.|+|+|++|++|++||+.|+
T Consensus 266 ~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~ 345 (354)
T PLN02151 266 IKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAKETNASYSLQEPDEVMEFLERLV 345 (354)
T ss_pred CCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCCCCcceEeCCCHHHHHHHHHHHH
Confidence 59999999999999999876555789999999999999999987767999999988889999999999999999999999
Q ss_pred HhhhhhHh
Q 015439 376 RWKKLEKE 383 (406)
Q Consensus 376 ~~~~~~~~ 383 (406)
.|++...+
T Consensus 346 ~~~~~~~~ 353 (354)
T PLN02151 346 EWKQLRCG 353 (354)
T ss_pred HhhhcccC
Confidence 99987543
No 4
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=4.5e-48 Score=421.25 Aligned_cols=316 Identities=22% Similarity=0.294 Sum_probs=255.4
Q ss_pred cCCCccCCCCCCC---CCceeecCCCCCCCcchhhhccHHHHHhcCCchhhhhccccCCCCCcccchhhhhhHHhhCCcc
Q 015439 26 HSRLPYSQPGASF---SGKCIAIPRKKPGKLDDVRSNGWLDAMKSSSPPRKKLIKDFNADVGLDDFDIAYCSWMLKYPSA 102 (406)
Q Consensus 26 ~~~~~~s~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~p~~ 102 (406)
++.|++|||+||+ +||++||| ||++++ +.+|+.|++|++.||+.||+ .+.+|+.+|+...|+.++..+
T Consensus 478 ~gvLiLSEfaGaa~~L~~Ai~VNP----~d~~~~--a~ai~~AL~m~~~Er~~R~~---~~~~~v~~~d~~~W~~~fl~~ 548 (854)
T PLN02205 478 KSMLVVSEFIGCSPSLSGAIRVNP----WNIDAV--ADAMDSALEMAEPEKQLRHE---KHYRYVSTHDVGYWARSFLQD 548 (854)
T ss_pred CCceEeeeccchhHHhCcCeEECC----CCHHHH--HHHHHHHHcCCHHHHHHHHH---HHHHHHhhCCHHHHHHHHHHH
Confidence 4559999999986 59999999 889999 99999999999999999998 448999999999998875444
Q ss_pred chh---------------------------H-----HHHH-HHhccCCEEEEEecCCccCCCCCCCCccCCChhHHHHHH
Q 015439 103 LKY---------------------------F-----EKIM-SEAKKKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVR 149 (406)
Q Consensus 103 L~~---------------------------f-----~~i~-~~~~~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~ 149 (406)
|.. | +.|+ +|.++++++||+||||||+|... ....++++++++|+
T Consensus 549 l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~--~~~~p~~~~~~~L~ 626 (854)
T PLN02205 549 LERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQAS--IDKSPSSKSIDILN 626 (854)
T ss_pred HHHHHHHHhhhhhcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCcc--ccCCCCHHHHHHHH
Confidence 321 2 3444 69999999999999999998653 24578899999999
Q ss_pred HHHhc--CCEEEEcCCChhhHHHHhCC-cCceEEccCCceEeCCCCCcccCCCCCCcccccccCCccccccccccccchH
Q 015439 150 NVAKY--FPTAIITGRSRDKVYELVGL-TELYYAGSHGMDIMGPVDHTVSDDHPNSIKSTDQQGKEVNLFQPAREFLPMI 226 (406)
Q Consensus 150 ~L~~~--~~v~I~SGR~~~~l~~~~~l-~~~~li~~nGa~I~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i 226 (406)
+|+++ +.|+|+|||++..+.++|+. ++++++|+||++++.+++. .|..+... ....|...
T Consensus 627 ~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~----~w~~~~~~------------~~~~w~~~- 689 (854)
T PLN02205 627 TLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDV----EWETCVPV------------ADCSWKQI- 689 (854)
T ss_pred HHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCc----eeeecchh------------hhHHHHHH-
Confidence 99876 47999999999999999975 5689999999999876542 23221110 01123333
Q ss_pred HHHHHHHHHHhhhccCceeeecceeEEEEeeecCCCCH----HHHHHHHHHHHhhCCCeEEEecCeEEEEEcCCCCCHHH
Q 015439 227 DEVFRTLVENTKSIKGAKVENHKFCVSVHYRNVDEKSW----PTIAQCVHDVLKDYPRLRLTHGRKVLEIRPVIDWNKGK 302 (406)
Q Consensus 227 ~~v~~~l~~~~~~~~g~~vE~~~~~l~~h~r~~d~~~~----~~l~~~l~~~l~~~p~l~v~~g~~~lEI~P~~gvsKG~ 302 (406)
+...+..+++++||+++|.+++++.||||.+++++. +++..++...+.+.+ +.+.+|++++||+|+ |+|||.
T Consensus 690 --v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~-~~v~~G~~vvEV~p~-gvnKG~ 765 (854)
T PLN02205 690 --AEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEP-VTVKSGQNIVEVKPQ-GVSKGL 765 (854)
T ss_pred --HHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCc-eEEEECCcEEEEEeC-CCCHHH
Confidence 333445557889999999999999999999987653 256666666676665 788899999999999 999999
Q ss_pred HHHHHHHH---cCCCCCCCccEEEEeCCcCCHHHHHHHHhCCC---------ceEEEecCCCCCccceEEeCCHHHHHHH
Q 015439 303 AVEFLLES---LGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNR---------GYGILVSSVPKETKAFYSLRDPSEVQEF 370 (406)
Q Consensus 303 Al~~Ll~~---lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~---------G~gVaVgna~~~t~A~y~l~~~~eV~~f 370 (406)
|+++|++. +|+..+ +++||||+.||++||+++..... +|+|.||. ++|.|.|+++++++|.+|
T Consensus 766 Al~~Ll~~~~~~g~~~d---~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~--~~S~A~y~L~d~~eV~~l 840 (854)
T PLN02205 766 VAKRLLSIMQERGMLPD---FVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQ--KPSKAKYYLDDTAEIVRL 840 (854)
T ss_pred HHHHHHHHHHhcCCCcc---cEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECC--CCccCeEecCCHHHHHHH
Confidence 99999864 576654 89999999999999999974212 48999984 679999999999999999
Q ss_pred HHHHHHhh
Q 015439 371 LLSLVRWK 378 (406)
Q Consensus 371 L~~L~~~~ 378 (406)
|+.|+...
T Consensus 841 L~~L~~~~ 848 (854)
T PLN02205 841 MQGLASVS 848 (854)
T ss_pred HHHHHhcc
Confidence 99998643
No 5
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=3.5e-45 Score=397.51 Aligned_cols=320 Identities=17% Similarity=0.215 Sum_probs=257.6
Q ss_pred cCCCccCCCCCCC----CCceeecCCCCCCCcchhhhccHHHHHhcCCchhhhhccccCCCCCcccchhhhhhHHhhCCc
Q 015439 26 HSRLPYSQPGASF----SGKCIAIPRKKPGKLDDVRSNGWLDAMKSSSPPRKKLIKDFNADVGLDDFDIAYCSWMLKYPS 101 (406)
Q Consensus 26 ~~~~~~s~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~p~ 101 (406)
++.|++|||+|++ .||++||| ||++++ +.+|+.|+.|++.+|+.++... ..++..++.+.|+..+..
T Consensus 487 ~GvLILSEfaGaa~~L~~~AllVNP----~D~~~v--A~AI~~AL~M~~~Er~~r~~~~---~~~V~~~d~~~Wa~~fl~ 557 (934)
T PLN03064 487 KGVLILSEFAGAAQSLGAGAILVNP----WNITEV--AASIAQALNMPEEEREKRHRHN---FMHVTTHTAQEWAETFVS 557 (934)
T ss_pred CCCeEEeCCCchHHHhCCceEEECC----CCHHHH--HHHHHHHHhCCHHHHHHHHHHH---HhhcccCCHHHHHHHHHH
Confidence 4569999999987 38999999 888999 9999999999999999998744 789999999999887544
Q ss_pred cch-----------------hHHHHH-HHhccCCEEEEEecCCccCCCCCCCC---------ccCCChhHHHHHHHHHhc
Q 015439 102 ALK-----------------YFEKIM-SEAKKKKIAIFSDYDGTLSPIVDDPD---------RAIMSDGMRSAVRNVAKY 154 (406)
Q Consensus 102 ~L~-----------------~f~~i~-~~~~~k~~lI~lD~DGTL~~~~~~p~---------~~~~s~~~~~aL~~L~~~ 154 (406)
+|. ..+.+. +|.++++++|||||||||+|++++|+ .+.++++++++|++|+++
T Consensus 558 ~L~~~~~~~~~~~~~~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~d 637 (934)
T PLN03064 558 ELNDTVVEAQLRTRQVPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSD 637 (934)
T ss_pred HHHHHHhhhhccccccCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhC
Confidence 442 123333 69999999999999999999998887 667899999999999998
Q ss_pred --CCEEEEcCCChhhHHHHhCCcCceEEccCCceEeCCCCCcccCCCCC-CcccccccCCccccccccccccchHHHHHH
Q 015439 155 --FPTAIITGRSRDKVYELVGLTELYYAGSHGMDIMGPVDHTVSDDHPN-SIKSTDQQGKEVNLFQPAREFLPMIDEVFR 231 (406)
Q Consensus 155 --~~v~I~SGR~~~~l~~~~~l~~~~li~~nGa~I~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~ 231 (406)
+.|+|+|||+++.+.++++..+++++|+||++++.+++. |.. +.+. ... .+.+.+..
T Consensus 638 p~n~VaIVSGR~~~~Le~~fg~~~L~LaAEHG~~~R~~~~~-----w~~~~~~~------------~~~---~W~~~v~~ 697 (934)
T PLN03064 638 PKTTIVVLSGSDRSVLDENFGEFDMWLAAENGMFLRHTKGE-----WMTTMPEH------------LNM---DWVDSVKH 697 (934)
T ss_pred CCCeEEEEeCCCHHHHHHHhCCCCceEEeeCCeEEecCCCc-----ceeccccc------------cch---HHHHHHHH
Confidence 479999999999999999977899999999999876543 421 1100 011 23455666
Q ss_pred HHHHHhhhccCceeeecceeEEEEeeecCCCCHHHHHHHHHHHH-----hhCCCeEEEecCeEEEEEcCCCCCHHHHHHH
Q 015439 232 TLVENTKSIKGAKVENHKFCVSVHYRNVDEKSWPTIAQCVHDVL-----KDYPRLRLTHGRKVLEIRPVIDWNKGKAVEF 306 (406)
Q Consensus 232 ~l~~~~~~~~g~~vE~~~~~l~~h~r~~d~~~~~~l~~~l~~~l-----~~~p~l~v~~g~~~lEI~P~~gvsKG~Al~~ 306 (406)
.++.+++++||+++|.|++++.||||.+|++++...+..+.+.+ ... .+++..|++++||+|. |+|||.|++.
T Consensus 698 ile~~~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~-~v~V~~Gk~VVEVrP~-gvnKG~Av~~ 775 (934)
T PLN03064 698 VFEYFTERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNA-AVDVVQGSRSVEVRPV-GVTKGAAIDR 775 (934)
T ss_pred HHHHHHhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCC-CcEEEeCCeEEEEEcC-CCCHHHHHHH
Confidence 66667899999999999999999999998776443333333222 233 5899999999999999 9999999999
Q ss_pred HHHHcCCCC---CCCccEEEEeCCcC-CHHHHHHHHhC------------------------------------------
Q 015439 307 LLESLGLSD---SDDVLPIYIGDDRT-DEDAFKVLRKG------------------------------------------ 340 (406)
Q Consensus 307 Ll~~lg~~~---~~~~~viaiGD~~N-DedMf~~~~~~------------------------------------------ 340 (406)
|++.+.-+. .+.+|++||||+.+ |||||+++..-
T Consensus 776 ll~~~~~~~~~~~~~DFvlc~GDd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 855 (934)
T PLN03064 776 ILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPSSRSNSKNSQGK 855 (934)
T ss_pred HHHhhhhccccCCCCCEEEEeCCCCCCcHHHHHHHhccCCcccccccccccCCcccCCccccccCCCccccccccccccc
Confidence 999864211 13469999999875 99999998540
Q ss_pred ---------------------------------------CCceEEEecCCCCCccceEEeCCHHHHHHHHHHHHHhh
Q 015439 341 ---------------------------------------NRGYGILVSSVPKETKAFYSLRDPSEVQEFLLSLVRWK 378 (406)
Q Consensus 341 ---------------------------------------~~G~gVaVgna~~~t~A~y~l~~~~eV~~fL~~L~~~~ 378 (406)
.+.|+|+|| .+.+.|.|.+++.+||..||+.|+...
T Consensus 856 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (934)
T PLN03064 856 KQRSLLSSAKSGVNHAASHGSDRRPSPEKIGWSVLDLKGENYFSCAVG--RKRSNARYLLGSSDDVVSFLKELANAS 930 (934)
T ss_pred cCCcccccccccccccccCCccccCCccccccccccccCcceEEEEec--cccccceeecCCHHHHHHHHHHHhccc
Confidence 134899999 478999999999999999999998643
No 6
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=3e-43 Score=383.02 Aligned_cols=322 Identities=15% Similarity=0.148 Sum_probs=252.9
Q ss_pred CCCccCCCCCCC----CCceeecCCCCCCCcchhhhccHHHHHhcCCchhhhhccccCCCCCcccchhhhhhHHhhCCcc
Q 015439 27 SRLPYSQPGASF----SGKCIAIPRKKPGKLDDVRSNGWLDAMKSSSPPRKKLIKDFNADVGLDDFDIAYCSWMLKYPSA 102 (406)
Q Consensus 27 ~~~~~s~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~p~~ 102 (406)
+.+++|||+|+. .|+++||| |+++++ +.+|..++.|++.+|+.|+... ..++..++...|+..+...
T Consensus 404 gvlVlSe~~G~~~~l~~~allVnP----~D~~~l--A~AI~~aL~m~~~er~~r~~~~---~~~v~~~~~~~Wa~~fl~~ 474 (797)
T PLN03063 404 GVLVLSEFAGAGQSLGAGALLVNP----WNITEV--SSAIKEALNMSDEERETRHRHN---FQYVKTHSAQKWADDFMSE 474 (797)
T ss_pred CCEEeeCCcCchhhhcCCeEEECC----CCHHHH--HHHHHHHHhCCHHHHHHHHHHH---HHhhhhCCHHHHHHHHHHH
Confidence 349999999974 38999999 888998 9999999999999999888744 7899999999998774443
Q ss_pred ch-----------------hHHHHH-HHhccCCEEEEEecCCccCCCCCC---CCccCCChhHHHHHHHHHhc--CCEEE
Q 015439 103 LK-----------------YFEKIM-SEAKKKKIAIFSDYDGTLSPIVDD---PDRAIMSDGMRSAVRNVAKY--FPTAI 159 (406)
Q Consensus 103 L~-----------------~f~~i~-~~~~~k~~lI~lD~DGTL~~~~~~---p~~~~~s~~~~~aL~~L~~~--~~v~I 159 (406)
|. ..+.+. +|.++++++|||||||||+++..+ |..+.++++++++|++|+++ +.|+|
T Consensus 475 l~~~~~~~~~~~~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~I 554 (797)
T PLN03063 475 LNDIIVEAELRTRNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVV 554 (797)
T ss_pred HHHHhhhhhhcccCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcCCCCEEEE
Confidence 31 123444 699999999999999999998663 46678999999999999998 47999
Q ss_pred EcCCChhhHHHHhCCcCceEEccCCceEeCCCCCcccCCCCCCcccccccCCccccccccccccchHHHHHHHHHHHhhh
Q 015439 160 ITGRSRDKVYELVGLTELYYAGSHGMDIMGPVDHTVSDDHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENTKS 239 (406)
Q Consensus 160 ~SGR~~~~l~~~~~l~~~~li~~nGa~I~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~~~ 239 (406)
+|||+.+.+.++++..+++++|+||++++.+++. |..+.. ..... .+.+.+...++.++++
T Consensus 555 vSGR~~~~L~~~~~~~~l~l~aeHG~~~r~~~~~-----w~~~~~-----------~~~~~---~w~~~v~~~l~~~~~r 615 (797)
T PLN03063 555 LSRSGKDILDKNFGEYNIWLAAENGMFLRHTSGE-----WVTTMP-----------EHMNL---DWVDGVKNVFKYFTDR 615 (797)
T ss_pred EeCCCHHHHHHHhCCCCCcEEEeCCEEEecCCCc-----eeeccc-----------cccCh---hHHHHHHHHHHHHHHh
Confidence 9999999999999977899999999999865432 321110 00011 2345566667777899
Q ss_pred ccCceeeecceeEEEEeeecCCCCHHHHHHHHHHHH-hh---CCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCC--
Q 015439 240 IKGAKVENHKFCVSVHYRNVDEKSWPTIAQCVHDVL-KD---YPRLRLTHGRKVLEIRPVIDWNKGKAVEFLLESLGL-- 313 (406)
Q Consensus 240 ~~g~~vE~~~~~l~~h~r~~d~~~~~~l~~~l~~~l-~~---~p~l~v~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~-- 313 (406)
+||+++|.|++++.||||.++++.....+..+...+ +. .+++++..|++++||+|. |+|||.|++.|++.+..
T Consensus 616 tpGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~-gvnKG~Av~~ll~~~~~~~ 694 (797)
T PLN03063 616 TPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAI-GVTKGAAIGRILGEIVHNK 694 (797)
T ss_pred CCCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcC-CCChHHHHHHHHHHhhhcc
Confidence 999999999999999999998765433333332222 21 235899999999999999 99999999999998721
Q ss_pred -CCCCCccEEEEeCCc-CCHHHHHHHHhCC----------------------------CceEEEecCCCCCccceEEeCC
Q 015439 314 -SDSDDVLPIYIGDDR-TDEDAFKVLRKGN----------------------------RGYGILVSSVPKETKAFYSLRD 363 (406)
Q Consensus 314 -~~~~~~~viaiGD~~-NDedMf~~~~~~~----------------------------~G~gVaVgna~~~t~A~y~l~~ 363 (406)
.....++++|+||+. +||+||+++.... .-|+|.||. ++|.|+|+|++
T Consensus 695 ~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~--~~s~A~y~l~~ 772 (797)
T PLN03063 695 SMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQ--ARTKARYVLDS 772 (797)
T ss_pred ccCCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceEEEEECC--CCccCeecCCC
Confidence 111235999999985 5999999986311 127899994 68999999999
Q ss_pred HHHHHHHHHHHHHhhh
Q 015439 364 PSEVQEFLLSLVRWKK 379 (406)
Q Consensus 364 ~~eV~~fL~~L~~~~~ 379 (406)
++||.++|+.|+....
T Consensus 773 ~~eV~~lL~~l~~~~~ 788 (797)
T PLN03063 773 SNDVVSLLHKLAVANT 788 (797)
T ss_pred HHHHHHHHHHHhccCc
Confidence 9999999999986443
No 7
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=8.9e-42 Score=370.59 Aligned_cols=310 Identities=26% Similarity=0.352 Sum_probs=247.1
Q ss_pred cCCCccCCCCCCC---CCceeecCCCCCCCcchhhhccHHHHHhcCCchhhhhccccCCCCCcccchhhhhhHHhhCCcc
Q 015439 26 HSRLPYSQPGASF---SGKCIAIPRKKPGKLDDVRSNGWLDAMKSSSPPRKKLIKDFNADVGLDDFDIAYCSWMLKYPSA 102 (406)
Q Consensus 26 ~~~~~~s~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~p~~ 102 (406)
|+.+++|||+|+. .|+++||| |+++++ +.+|..++.|++.+++.++.. ...++..++...|+.++...
T Consensus 389 ~g~~vls~~~G~~~~l~~~llv~P----~d~~~l--a~ai~~~l~~~~~e~~~r~~~---~~~~v~~~~~~~w~~~~l~~ 459 (726)
T PRK14501 389 DGVLILSEMAGAAAELAEALLVNP----NDIEGI--AAAIKRALEMPEEEQRERMQA---MQERLRRYDVHKWASDFLDE 459 (726)
T ss_pred CceEEEecccchhHHhCcCeEECC----CCHHHH--HHHHHHHHcCCHHHHHHHHHH---HHHHHHhCCHHHHHHHHHHH
Confidence 3559999999976 48899999 888988 999999999998887766652 25567778888998774433
Q ss_pred ch-----------------hHHHHH-HHhccCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhc--CCEEEEcC
Q 015439 103 LK-----------------YFEKIM-SEAKKKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKY--FPTAIITG 162 (406)
Q Consensus 103 L~-----------------~f~~i~-~~~~~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~--~~v~I~SG 162 (406)
|. .++.+. +|.++++++|+|||||||+++..+|+.+.++++++++|++|+++ ..|+|+||
T Consensus 460 l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSG 539 (726)
T PRK14501 460 LREAAEKNKAFASKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISG 539 (726)
T ss_pred HHHHHhhhhccccccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeC
Confidence 32 234555 68899999999999999999887788888999999999999995 48999999
Q ss_pred CChhhHHHHhCCcCceEEccCCceEeCCCCCcccCCCCCCcccccccCCccccccccccccchHHHHHHHHHHHhhhccC
Q 015439 163 RSRDKVYELVGLTELYYAGSHGMDIMGPVDHTVSDDHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENTKSIKG 242 (406)
Q Consensus 163 R~~~~l~~~~~l~~~~li~~nGa~I~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~~~~~g 242 (406)
|++..+.++++..++++|++||++++.+++. |.... .....|. +.+.+.+..+.++++|
T Consensus 540 R~~~~l~~~~~~~~l~liaenG~~i~~~~~~-----w~~~~-------------~~~~~w~---~~v~~il~~~~~~~~g 598 (726)
T PRK14501 540 RDRDTLERWFGDLPIHLVAEHGAWSRAPGGE-----WQLLE-------------PVATEWK---DAVRPILEEFVDRTPG 598 (726)
T ss_pred CCHHHHHHHhCCCCeEEEEeCCEEEeCCCCc-----eEECC-------------CcchhHH---HHHHHHHHHHHhcCCC
Confidence 9999999999866789999999999876543 21100 0112233 4444555555678899
Q ss_pred ceeeecceeEEEEeeecCCCCHHH----HHHHHHHHHhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCC
Q 015439 243 AKVENHKFCVSVHYRNVDEKSWPT----IAQCVHDVLKDYPRLRLTHGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDD 318 (406)
Q Consensus 243 ~~vE~~~~~l~~h~r~~d~~~~~~----l~~~l~~~l~~~p~l~v~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~ 318 (406)
+++|.++.+++|||+.++++.... +.+.+..++... .+.+.+|+.++||+|+ ++|||.|+++|++ +++.+
T Consensus 599 s~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~-~~~v~~g~~~veV~p~-~vnKG~al~~ll~--~~~~d-- 672 (726)
T PRK14501 599 SFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNA-PLEVLRGNKVVEVRPA-GVNKGRAVRRLLE--AGPYD-- 672 (726)
T ss_pred cEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCC-CeEEEECCeEEEEEEC-CCCHHHHHHHHHh--cCCCC--
Confidence 999999999999999887665433 334444444443 4788899999999999 9999999999999 44443
Q ss_pred ccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCCCccceEEeCCHHHHHHHHHHHHH
Q 015439 319 VLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPKETKAFYSLRDPSEVQEFLLSLVR 376 (406)
Q Consensus 319 ~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~~t~A~y~l~~~~eV~~fL~~L~~ 376 (406)
+++||||+.||++||+.++. .|++|+||| +++.|+|++++++||+++|++|++
T Consensus 673 -~vl~~GD~~nDe~Mf~~~~~--~~~~v~vG~--~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 673 -FVLAIGDDTTDEDMFRALPE--TAITVKVGP--GESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred -EEEEECCCCChHHHHHhccc--CceEEEECC--CCCcceEeCCCHHHHHHHHHHHhc
Confidence 89999999999999999843 379999998 468999999999999999999874
No 8
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=100.00 E-value=5.6e-38 Score=302.61 Aligned_cols=232 Identities=25% Similarity=0.401 Sum_probs=190.2
Q ss_pred CEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhc--CCEEEEcCCChhhHHHHhCCcCceEEccCCceEeCCCCCc
Q 015439 117 KIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKY--FPTAIITGRSRDKVYELVGLTELYYAGSHGMDIMGPVDHT 194 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~--~~v~I~SGR~~~~l~~~~~l~~~~li~~nGa~I~~~~~~~ 194 (406)
+++||+||||||+++..+|++..++++++++|++|+++ ..|+|+|||++..+.++++..+++++|+||++++..++..
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~ 93 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKT 93 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCe
Confidence 68999999999999998899999999999999999984 4899999999999999998666789999999998765431
Q ss_pred ccCCCCCCcccccccCCccccccccccccchHHHHHHHHHHHhhhccCceeeecceeEEEEeeecCCCCHHHHHHHH-HH
Q 015439 195 VSDDHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENTKSIKGAKVENHKFCVSVHYRNVDEKSWPTIAQCV-HD 273 (406)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~~~~~g~~vE~~~~~l~~h~r~~d~~~~~~l~~~l-~~ 273 (406)
+.. . ... +....+.+.+.++++++||.++|.++.++.+||+.++.. .+....+ ..
T Consensus 94 ----~~~-----~----------l~~---~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~--~~~~~~l~~~ 149 (266)
T PRK10187 94 ----HIV-----H----------LPD---AIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQH--EDALLALAQR 149 (266)
T ss_pred ----eec-----c----------CCh---hHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCcc--HHHHHHHHHH
Confidence 000 0 001 233556666666667889999999999999999887432 2333344 34
Q ss_pred HHhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCC
Q 015439 274 VLKDYPRLRLTHGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPK 353 (406)
Q Consensus 274 ~l~~~p~l~v~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~ 353 (406)
+.+.++.+.+.+|+.++||+|+ ++|||.||++|++.+|++.+ .++||||+.||++||+++++. .|+||+|||+
T Consensus 150 i~~~~~~~~~~~g~~~lEi~p~-g~~Kg~al~~ll~~~~~~~~---~v~~~GD~~nD~~mf~~~~~~-~g~~vavg~a-- 222 (266)
T PRK10187 150 ITQIWPQLALQPGKCVVEIKPR-GTNKGEAIAAFMQEAPFAGR---TPVFVGDDLTDEAGFAVVNRL-GGISVKVGTG-- 222 (266)
T ss_pred HHhhCCceEEeCCCEEEEeeCC-CCCHHHHHHHHHHhcCCCCC---eEEEEcCCccHHHHHHHHHhc-CCeEEEECCC--
Confidence 4445655778899999999999 99999999999999998875 799999999999999999643 3899999987
Q ss_pred CccceEEeCCHHHHHHHHHHHHHhhh
Q 015439 354 ETKAFYSLRDPSEVQEFLLSLVRWKK 379 (406)
Q Consensus 354 ~t~A~y~l~~~~eV~~fL~~L~~~~~ 379 (406)
.+.|.|++++|++|..||..|+..++
T Consensus 223 ~~~A~~~l~~~~~v~~~L~~l~~~~~ 248 (266)
T PRK10187 223 ATQASWRLAGVPDVWSWLEMITTAQQ 248 (266)
T ss_pred CCcCeEeCCCHHHHHHHHHHHHHhhh
Confidence 47799999999999999999997655
No 9
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=100.00 E-value=1.6e-38 Score=300.96 Aligned_cols=225 Identities=42% Similarity=0.630 Sum_probs=148.3
Q ss_pred EEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC--CEEEEcCCChhhHHHHhCCcCceEEccCCceEeCCCCCcccCC
Q 015439 121 FSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF--PTAIITGRSRDKVYELVGLTELYYAGSHGMDIMGPVDHTVSDD 198 (406)
Q Consensus 121 ~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~--~v~I~SGR~~~~l~~~~~l~~~~li~~nGa~I~~~~~~~~~~~ 198 (406)
||||||||.|+..+|+.+.++++++++|++|++++ .|+|+|||+.+.+..++++++++++|+||++++.+++..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~---- 76 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSE---- 76 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-E----
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCcccc----
Confidence 79999999999999999999999999999999986 599999999999888888999999999999999887642
Q ss_pred CCCCcccccccCCccccccccccccchHHHHHHHHHHHhhhccCceeeecceeEEEEeeecCCCC----HHHHHHHHHHH
Q 015439 199 HPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENTKSIKGAKVENHKFCVSVHYRNVDEKS----WPTIAQCVHDV 274 (406)
Q Consensus 199 ~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~~~~~g~~vE~~~~~l~~h~r~~d~~~----~~~l~~~l~~~ 274 (406)
|.. .......++.+.+.+.++.+.+++||+++|.++++++||||.+++++ ..++.+.+.+.
T Consensus 77 ~~~---------------~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~ 141 (235)
T PF02358_consen 77 WTN---------------LPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREI 141 (235)
T ss_dssp EE----------------TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHH
T ss_pred ccc---------------cccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHH
Confidence 110 01122235567777777777789999999999999999999998873 45677778887
Q ss_pred HhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhC-CCceEEEecCCC-
Q 015439 275 LKDYPRLRLTHGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKG-NRGYGILVSSVP- 352 (406)
Q Consensus 275 l~~~p~l~v~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~-~~G~gVaVgna~- 352 (406)
+..++++++..|++++||+|. +++||.|+++|++.++....+.++++|+|||.+||+||+++++. ..|++|.|+...
T Consensus 142 ~~~~~~~~v~~g~~~vEvrp~-~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~ 220 (235)
T PF02358_consen 142 LASHPGLEVVPGKKVVEVRPP-GVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSV 220 (235)
T ss_dssp HHHH-T-EEEE-SSEEEEE-T-T--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES----
T ss_pred HHhCCCEEEEECCCEEEEEeC-CCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecc
Confidence 777767999999999999999 99999999999999987633446899999999999999999864 248999999865
Q ss_pred --CCccceEEeCCHH
Q 015439 353 --KETKAFYSLRDPS 365 (406)
Q Consensus 353 --~~t~A~y~l~~~~ 365 (406)
+.|.|+|++++|+
T Consensus 221 ~~~~t~A~y~l~~p~ 235 (235)
T PF02358_consen 221 GEKPTAASYRLDDPS 235 (235)
T ss_dssp ---------------
T ss_pred cccccccccccccCC
Confidence 5699999999874
No 10
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=100.00 E-value=1.7e-36 Score=288.77 Aligned_cols=236 Identities=33% Similarity=0.404 Sum_probs=184.0
Q ss_pred cCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC--CEEEEcCCChhhHHHHhCCcCceEEccCCceEeCCCC
Q 015439 115 KKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF--PTAIITGRSRDKVYELVGLTELYYAGSHGMDIMGPVD 192 (406)
Q Consensus 115 ~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~--~v~I~SGR~~~~l~~~~~l~~~~li~~nGa~I~~~~~ 192 (406)
+|+++|||||||||+++..+|+...++++++++|++|+++. .|+|+|||+...+..++.+++++++|+||++++.++.
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l~g~hG~~~~~~g~ 80 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGEHGCEMKDNGS 80 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeEEeecCEEEecCCC
Confidence 57899999999999999999999999999999999999984 5789999999998888877889999999999986322
Q ss_pred CcccCCCCCCcccccccCCccccccccccccchHHHHHHHHHHHhhhccCceeeecceeEEEEeeec-CCCCHHHHH-HH
Q 015439 193 HTVSDDHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENTKSIKGAKVENHKFCVSVHYRNV-DEKSWPTIA-QC 270 (406)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~~~~~g~~vE~~~~~l~~h~r~~-d~~~~~~l~-~~ 270 (406)
. ..|.... .....|.+...++.+++ ...||+++|+++++++||||.+ +++...... +.
T Consensus 81 ~---~~~~~~~-------------~~~~~~~~~~~~l~~~~----~~~pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~ 140 (244)
T TIGR00685 81 C---QDWVNLT-------------EKIPSWKVRANELREEI----TTRPGVFIERKGVALAWHYRQAPVPELARFRAKEL 140 (244)
T ss_pred c---ceeeech-------------hhhhhHHHHHHHHHHHH----hcCCCcEEEecceEEEEEeccCCCcHHHHHHHHHH
Confidence 1 1121100 00012333344444444 3349999999999999999998 443332222 22
Q ss_pred HHHHHhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCC---CceEEE
Q 015439 271 VHDVLKDYPRLRLTHGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGN---RGYGIL 347 (406)
Q Consensus 271 l~~~l~~~p~l~v~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~---~G~gVa 347 (406)
+..+.... ++.+..|+.++||+|. ++|||.+++++++.+++... .++||||+.||++||+.++... .|++|.
T Consensus 141 ~~~~~~~~-~~~v~~g~~~~e~~p~-~~~Kg~a~~~~~~~~~~~~~---~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~ 215 (244)
T TIGR00685 141 KEKILSFT-DLEVMDGKAVVELKPR-FVNKGEIVKRLLWHQPGSGI---SPVYLGDDITDEDAFRVVNNQWGNYGFYPVP 215 (244)
T ss_pred HHHHhcCC-CEEEEECCeEEEEeeC-CCCHHHHHHHHHHhcccCCC---ceEEEcCCCcHHHHHHHHhcccCCCCeEEEE
Confidence 23333333 5889999999999999 99999999999999998764 7999999999999999994321 379999
Q ss_pred ecCCCCCccceEEeCCHHHHHHHHHHHH
Q 015439 348 VSSVPKETKAFYSLRDPSEVQEFLLSLV 375 (406)
Q Consensus 348 Vgna~~~t~A~y~l~~~~eV~~fL~~L~ 375 (406)
|+....++.|+|+++++++|.+||+.|+
T Consensus 216 v~~g~~~~~A~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 216 IGSGSKKTVAKFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred EecCCcCCCceEeCCCHHHHHHHHHHHh
Confidence 9755667899999999999999999875
No 11
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-36 Score=287.98 Aligned_cols=242 Identities=29% Similarity=0.419 Sum_probs=205.4
Q ss_pred HHhccCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcCC--EEEEcCCChhhHHHHhCCcCceEEccCCceEe
Q 015439 111 SEAKKKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYFP--TAIITGRSRDKVYELVGLTELYYAGSHGMDIM 188 (406)
Q Consensus 111 ~~~~~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~~--v~I~SGR~~~~l~~~~~l~~~~li~~nGa~I~ 188 (406)
.|.+.++++||+||||||+++..+|..+.++++++++|++|+++++ ++|+|||+...+..++++++++++|+||++++
T Consensus 12 ~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r 91 (266)
T COG1877 12 PYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVR 91 (266)
T ss_pred ccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEe
Confidence 5889999999999999999999999999999999999999999964 99999999999999999999999999999998
Q ss_pred CCCCCcccCCCCCCcccccccCCccccccccccccchHHHHHHHHHHHhhhccCceeeecceeEEEEeeecCCCCHHHHH
Q 015439 189 GPVDHTVSDDHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENTKSIKGAKVENHKFCVSVHYRNVDEKSWPTIA 268 (406)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~~~~~g~~vE~~~~~l~~h~r~~d~~~~~~l~ 268 (406)
.+++.+ |.+. ....++.+.+++.+.++.+++++||+++|.+++++.||||+++++......
T Consensus 92 ~~~g~~----~~~~---------------~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a 152 (266)
T COG1877 92 DPNGKW----WINL---------------AEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALA 152 (266)
T ss_pred cCCCCe----eEec---------------CHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHH
Confidence 887653 2221 233456777899999999999999999999999999999999876433222
Q ss_pred HHHHHHHhhCCC-eEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEE
Q 015439 269 QCVHDVLKDYPR-LRLTHGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGIL 347 (406)
Q Consensus 269 ~~l~~~l~~~p~-l~v~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVa 347 (406)
..... ....+. ++++.|+.+||++|. +++||.++.++++.++.... +++|.|||.+||+||++++... +++|-
T Consensus 153 ~~~~~-~~~~~~~~~v~~gk~vVEvrp~-~~~KG~a~~~i~~~~~~~~~---~~~~aGDD~TDE~~F~~v~~~~-~~~v~ 226 (266)
T COG1877 153 LAEAA-TLINELKLRVTPGKMVVELRPP-GVSKGAAIKYIMDELPFDGR---FPIFAGDDLTDEDAFAAVNKLD-SITVK 226 (266)
T ss_pred HHHHH-hccccccEEEEeCceEEEEeeC-CcchHHHHHHHHhcCCCCCC---cceecCCCCccHHHHHhhccCC-CceEE
Confidence 22222 122233 889999999999999 99999999999999988763 8999999999999999997653 67777
Q ss_pred ecCCCCCccceEEeCCHHHHHHHHHHHHHhhh
Q 015439 348 VSSVPKETKAFYSLRDPSEVQEFLLSLVRWKK 379 (406)
Q Consensus 348 Vgna~~~t~A~y~l~~~~eV~~fL~~L~~~~~ 379 (406)
|+. ..+.|++.+..+..+..++.++....+
T Consensus 227 v~~--~~t~a~~~~~~~~~~~~~l~~~~~~~~ 256 (266)
T COG1877 227 VGV--GSTQAKFRLAGVYGFLRSLYKLLEALG 256 (266)
T ss_pred ecC--CcccccccccccHHHHHHHHHHHHHhh
Confidence 774 478999999999999999999987665
No 12
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.5e-34 Score=301.49 Aligned_cols=299 Identities=24% Similarity=0.259 Sum_probs=244.1
Q ss_pred CCccCCCCCCC----CCceeecCCCCCCCcchhhhccHHHHHhcCCchhhhhccccCCCCCcccchhhhhhHHhhCCccc
Q 015439 28 RLPYSQPGASF----SGKCIAIPRKKPGKLDDVRSNGWLDAMKSSSPPRKKLIKDFNADVGLDDFDIAYCSWMLKYPSAL 103 (406)
Q Consensus 28 ~~~~s~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~p~~L 103 (406)
.+++|||+|+. .|++++|| |+.+++ +.+|..++.||..+++.++..+ ..++.++++..|..++..-|
T Consensus 402 ~lVlsef~G~~~tl~d~aivvnp----w~~~~~--~~~i~~al~~s~~e~~~r~~~~---~~~v~~~~~~~W~~~~~~~l 472 (732)
T KOG1050|consen 402 VLVLSEFIGDDTTLEDAAIVVNP----WDGDEF--AILISKALTMSDEERELREPKH---YKYVSTHDVVYWAKSFLQGL 472 (732)
T ss_pred ceEEeeeccccccccccCEEECC----cchHHH--HHHHHHHhhcCHHHHhhcchhh---hhhhcchhHHHHHHHHHHhh
Confidence 39999999975 49999999 777888 9999999999999999999855 78999999999987755533
Q ss_pred -----------------hhHHHHHHHhccCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC--CEEEEcCCC
Q 015439 104 -----------------KYFEKIMSEAKKKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF--PTAIITGRS 164 (406)
Q Consensus 104 -----------------~~f~~i~~~~~~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~--~v~I~SGR~ 164 (406)
..-.-+..|.++++++|++|||||+.+.. |..+...|+.|+.++ .|+|+|||+
T Consensus 473 ~~~~~~~~~~~~~~~~l~~~~~i~~y~~s~~rli~ldyd~t~~~~~--------~~~~~~~l~~L~~dp~n~v~i~s~~~ 544 (732)
T KOG1050|consen 473 KRIWKVGFLGFRVTPLLTAEHIVSDYKKSKKRLILLDYDLTLIPPR--------SIKAISILKDLCSDPKNIVYIVSGRG 544 (732)
T ss_pred hhhhhhcccccccccccChhHhhhhhhhccceEEEecccccccCCC--------CchHHHHHHHHhcCCCCeEEEEEccC
Confidence 21223346999999999999999988722 122999999999984 699999999
Q ss_pred hhhHHHHh-CCcCceEEccCCceEeCCCCCcccCCCCCCcccccccCCccccccccccccchHHHHHHHHHHHhhhccCc
Q 015439 165 RDKVYELV-GLTELYYAGSHGMDIMGPVDHTVSDDHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENTKSIKGA 243 (406)
Q Consensus 165 ~~~l~~~~-~l~~~~li~~nGa~I~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~~~~~g~ 243 (406)
+..+..++ +.++++++|+||++++.+++ |.++. .++ ++.+.+.+.++.+++++||+
T Consensus 545 r~~l~~~~~~~~~lgl~aEhG~f~r~~~~------w~~~~--~~~---------------~w~~~v~~i~~~~~ert~GS 601 (732)
T KOG1050|consen 545 RSVLEKWFFGCKNLGLAAEHGYFVRIPGK------WETCV--LDL---------------DWKDLVKDIFQYYTERTPGS 601 (732)
T ss_pred chhhhhhccccccceeecccCceeccCCc------eeeec--ccc---------------cHHHHHHHHHHHHHhcCCCc
Confidence 99998876 57899999999999998875 55443 222 33445555555668999999
Q ss_pred eeeecceeEEEEeeecCCCCHHHHHHHHHHHHhh-CCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEE
Q 015439 244 KVENHKFCVSVHYRNVDEKSWPTIAQCVHDVLKD-YPRLRLTHGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPI 322 (406)
Q Consensus 244 ~vE~~~~~l~~h~r~~d~~~~~~l~~~l~~~l~~-~p~l~v~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~vi 322 (406)
++|.++..+.|||++++++++..++..+.+.+.. .-.+.++.|+..+||+|. |++||.|++.++..+. .+.++++
T Consensus 602 ~ie~k~~~l~~hy~~ad~~~g~~qA~el~~~l~~~~~~~~v~~g~~~Vev~~~-gvsk~~~~~~~~~~~~---~~~df~~ 677 (732)
T KOG1050|consen 602 YIERKETALVWHYRNADPEFGELQAKELLEHLESKNEPVEVVRGKHIVEVRPQ-GVSKGLAAERILSEMV---KEPDFVL 677 (732)
T ss_pred eecccCceEEEeeeccCcchhHHHHHHHHHHhcccCCCeEEEecCceEEEccc-ccchHHHHHHHHHhcC---CCcceEE
Confidence 9999999999999999988876555555444443 224889999999999999 9999999999999998 2346999
Q ss_pred EEeCCcCCHHHHHHHHhCC------CceEEEecCCCCCccceEEeCCHHHHHHHHH
Q 015439 323 YIGDDRTDEDAFKVLRKGN------RGYGILVSSVPKETKAFYSLRDPSEVQEFLL 372 (406)
Q Consensus 323 aiGD~~NDedMf~~~~~~~------~G~gVaVgna~~~t~A~y~l~~~~eV~~fL~ 372 (406)
|+||+.+|++||.++.... .-|.|+||. +.+.|+|.+.++.+|.+.|+
T Consensus 678 c~g~d~tDed~~~~~~~~~~~~~~~~~F~~~~g~--~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 678 CIGDDRTDEDMFEFISKAKDPEKVEEIFACTVGQ--KPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred EecCCCChHHHHHHHhhccCCcccceEEEEEcCC--CCcccccccCChHHHHhhcc
Confidence 9999999999999986532 347888886 78999999999999998775
No 13
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.97 E-value=2.3e-29 Score=241.72 Aligned_cols=224 Identities=22% Similarity=0.242 Sum_probs=149.0
Q ss_pred CCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC-C-cCceEEccCCceEeCCCC
Q 015439 116 KKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG-L-TELYYAGSHGMDIMGPVD 192 (406)
Q Consensus 116 k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~-l-~~~~li~~nGa~I~~~~~ 192 (406)
..++||+|+||||+. ++..++++++++|+++++.+ +|+|+|||++..+.+++. + ...++|++||++|+.+ +
T Consensus 2 ~~kli~~DlDGTLl~-----~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~-~ 75 (264)
T COG0561 2 MIKLLAFDLDGTLLD-----SNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNG-G 75 (264)
T ss_pred CeeEEEEcCCCCccC-----CCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecC-C
Confidence 468999999999999 56679999999999999885 899999999999999884 2 2238999999999998 3
Q ss_pred CcccCCCCCCcccccccCCccccccccccccchHHHHHHHHHHHhhhccCceeeeccee-----------------EEEE
Q 015439 193 HTVSDDHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENTKSIKGAKVENHKFC-----------------VSVH 255 (406)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~~~~~g~~vE~~~~~-----------------l~~h 255 (406)
..+. ..+ .. ...+.++...+... ......+....... ....
T Consensus 76 ~~i~-~~~-----------------l~---~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (264)
T COG0561 76 ELLF-QKP-----------------LS---REDVEELLELLEDF-QGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPV 133 (264)
T ss_pred cEEe-eec-----------------CC---HHHHHHHHHHHHhc-cCceEEEEeccceeeccCCCccccccccccccccc
Confidence 3211 000 00 02233444333211 00111111100000 0000
Q ss_pred eeecCCC---------CHHHHHHHHHH-HHhhCC--CeEEEecCe-EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEE
Q 015439 256 YRNVDEK---------SWPTIAQCVHD-VLKDYP--RLRLTHGRK-VLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPI 322 (406)
Q Consensus 256 ~r~~d~~---------~~~~l~~~l~~-~l~~~p--~l~v~~g~~-~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~vi 322 (406)
....+.. ...+....+.. +.+.++ .+.++++.. ++||.|+ |+|||.|+++|++++|++.+ +++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~-g~~K~~al~~l~~~lgi~~~---~v~ 209 (264)
T COG0561 134 GREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPISLDITPK-GVSKGYALQRLAKLLGIKLE---EVI 209 (264)
T ss_pred ccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCceEEEecC-CCchHHHHHHHHHHhCCCHH---HeE
Confidence 0000000 00122233322 333344 245555544 4999999 99999999999999999865 799
Q ss_pred EEeCCcCCHHHHHHHHhCCCceEEEecCCCCC--ccceEEeC--CHHHHHHHHHHHHH
Q 015439 323 YIGDDRTDEDAFKVLRKGNRGYGILVSSVPKE--TKAFYSLR--DPSEVQEFLLSLVR 376 (406)
Q Consensus 323 aiGD~~NDedMf~~~~~~~~G~gVaVgna~~~--t~A~y~l~--~~~eV~~fL~~L~~ 376 (406)
+|||+.||++||+++ |+||+|+||+++ ..|+|++. +.++|+++|+++..
T Consensus 210 afGD~~ND~~Ml~~a-----g~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 210 AFGDSTNDIEMLEVA-----GLGVAMGNADEELKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred EeCCccccHHHHHhc-----CeeeeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence 999999999999997 999999999653 57887764 56789999998763
No 14
>PRK10976 putative hydrolase; Provisional
Probab=99.97 E-value=3.5e-29 Score=240.62 Aligned_cols=239 Identities=18% Similarity=0.183 Sum_probs=146.7
Q ss_pred CEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC-C-cCceEEccCCceEeCCCCC
Q 015439 117 KIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG-L-TELYYAGSHGMDIMGPVDH 193 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~-l-~~~~li~~nGa~I~~~~~~ 193 (406)
.++||+|+||||++ ++..++++++++|+++++++ .|+|+|||++..+..++. + ...++|++||+.|+..++.
T Consensus 2 ikli~~DlDGTLl~-----~~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 76 (266)
T PRK10976 2 YQVVASDLDGTLLS-----PDHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGN 76 (266)
T ss_pred ceEEEEeCCCCCcC-----CCCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCC
Confidence 47999999999998 45679999999999999995 899999999999988764 2 2357899999999975444
Q ss_pred cccCCCCCCccc----ccc--c--CCccccccccccccch-HHHHHHHHHHHhhhccC---ceeeecceeEEEEeeecCC
Q 015439 194 TVSDDHPNSIKS----TDQ--Q--GKEVNLFQPAREFLPM-IDEVFRTLVENTKSIKG---AKVENHKFCVSVHYRNVDE 261 (406)
Q Consensus 194 ~~~~~~~~~~~~----~~~--~--~~~~~l~~~a~~~~~~-i~~v~~~l~~~~~~~~g---~~vE~~~~~l~~h~r~~d~ 261 (406)
.+.. .+...+. ... . ...+.++.....+... .......+......... ..++...+ ..+.+...+.
T Consensus 77 ~i~~-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~ki~~~~~~~ 154 (266)
T PRK10976 77 LIFS-HNLDRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGV-SKVFFTCDSH 154 (266)
T ss_pred Eehh-hcCCHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCc-eEEEEEcCCH
Confidence 3211 1100000 000 0 0000111111111100 00101111000000000 00000000 0111110011
Q ss_pred CCHHHHHHHHHHHH-hhCC-CeEEE-ecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHH
Q 015439 262 KSWPTIAQCVHDVL-KDYP-RLRLT-HGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLR 338 (406)
Q Consensus 262 ~~~~~l~~~l~~~l-~~~p-~l~v~-~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~ 338 (406)
+..+.+.+.+ +.+. .+.++ ++..++||.|+ |+|||.||++|++++|++.+ ++++|||+.||++||+.+
T Consensus 155 ----~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~-gvsKg~al~~l~~~lgi~~~---~viafGD~~NDi~Ml~~a- 225 (266)
T PRK10976 155 ----EKLLPLEQAINARWGDRVNVSFSTLTCLEVMAG-GVSKGHALEAVAKKLGYSLK---DCIAFGDGMNDAEMLSMA- 225 (266)
T ss_pred ----HHHHHHHHHHHHHhCCcEEEEEeCCceEEEEcC-CCChHHHHHHHHHHcCCCHH---HeEEEcCCcccHHHHHHc-
Confidence 1122232222 2232 35553 56689999999 99999999999999999886 799999999999999997
Q ss_pred hCCCceEEEecCCCCC--ccce--EEeC--CHHHHHHHHHHHH
Q 015439 339 KGNRGYGILVSSVPKE--TKAF--YSLR--DPSEVQEFLLSLV 375 (406)
Q Consensus 339 ~~~~G~gVaVgna~~~--t~A~--y~l~--~~~eV~~fL~~L~ 375 (406)
|+||||+||.++ ..|+ +++. +.++|+++|++++
T Consensus 226 ----g~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 226 ----GKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred ----CCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 899999999864 4665 6764 5678999999876
No 15
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.96 E-value=1.5e-29 Score=243.45 Aligned_cols=239 Identities=18% Similarity=0.151 Sum_probs=146.1
Q ss_pred CCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC---Cc--CceEEccCCceEeC
Q 015439 116 KKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG---LT--ELYYAGSHGMDIMG 189 (406)
Q Consensus 116 k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~---l~--~~~li~~nGa~I~~ 189 (406)
+.++||+|+||||++ ++..++++++++|++|++++ .|+|+|||++..+..++. +. ..|+|++||+.|+.
T Consensus 2 ~~kli~~DlDGTLl~-----~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~ 76 (270)
T PRK10513 2 AIKLIAIDMDGTLLL-----PDHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQK 76 (270)
T ss_pred ceEEEEEecCCcCcC-----CCCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEE
Confidence 358999999999998 45689999999999999995 899999999999888764 32 24799999999986
Q ss_pred CC-CCcccCCCCCCcccc-------cccCCccccccccccccc--hHHHHHHHHHHHhhhccCce-----eeecceeEEE
Q 015439 190 PV-DHTVSDDHPNSIKST-------DQQGKEVNLFQPAREFLP--MIDEVFRTLVENTKSIKGAK-----VENHKFCVSV 254 (406)
Q Consensus 190 ~~-~~~~~~~~~~~~~~~-------~~~~~~~~l~~~a~~~~~--~i~~v~~~l~~~~~~~~g~~-----vE~~~~~l~~ 254 (406)
+. +..+. ..+...+.. ...+....++.....|.. ...... .........+... +........+
T Consensus 77 ~~~~~~i~-~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 154 (270)
T PRK10513 77 AADGETVA-QTALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYT-VHESFLTGIPLVFREVEKMDPNLQFPKV 154 (270)
T ss_pred CCCCCEEE-ecCCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhH-HHhhhhccCCccccchhhccccCCceEE
Confidence 42 33221 111000000 000000000000000000 000000 0000000000000 0000000000
Q ss_pred EeeecCCCCHHHHHHHH-HHHHhhC-CCeEE-EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCH
Q 015439 255 HYRNVDEKSWPTIAQCV-HDVLKDY-PRLRL-THGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDE 331 (406)
Q Consensus 255 h~r~~d~~~~~~l~~~l-~~~l~~~-p~l~v-~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDe 331 (406)
-.. .++ +..+.+ ..+.+.+ ..+.+ .++..++||.|+ |+|||+||++|++++|++.+ ++++|||+.||+
T Consensus 155 ~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~-gvsKg~al~~l~~~~gi~~~---~v~afGD~~NDi 225 (270)
T PRK10513 155 MMI-DEP----EILDAAIARIPAEVKERYTVLKSAPYFLEILDK-RVNKGTGVKSLAEHLGIKPE---EVMAIGDQENDI 225 (270)
T ss_pred EEe-CCH----HHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCC-CCChHHHHHHHHHHhCCCHH---HEEEECCchhhH
Confidence 000 011 111222 2222222 23554 356789999999 99999999999999999986 799999999999
Q ss_pred HHHHHHHhCCCceEEEecCCCCC--ccceEEeC--CHHHHHHHHHHHH
Q 015439 332 DAFKVLRKGNRGYGILVSSVPKE--TKAFYSLR--DPSEVQEFLLSLV 375 (406)
Q Consensus 332 dMf~~~~~~~~G~gVaVgna~~~--t~A~y~l~--~~~eV~~fL~~L~ 375 (406)
+||+.+ |+||||+||+++ ..|+|++. +.++|+++|++++
T Consensus 226 ~Ml~~a-----g~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 226 AMIEYA-----GVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HHHHhC-----CceEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 999997 899999999864 68999985 4578999999875
No 16
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.96 E-value=2.5e-28 Score=235.93 Aligned_cols=224 Identities=19% Similarity=0.269 Sum_probs=147.4
Q ss_pred CCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC---CcCceEEccCCceEeCCC
Q 015439 116 KKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG---LTELYYAGSHGMDIMGPV 191 (406)
Q Consensus 116 k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~---l~~~~li~~nGa~I~~~~ 191 (406)
.+++||+|+||||++ ++..+++.++++|++|.+++ +|+|+|||++..+..++. +...++|++||+.|+.+.
T Consensus 6 ~~~lI~~DlDGTLL~-----~~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~ 80 (271)
T PRK03669 6 DPLLIFTDLDGTLLD-----SHTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDE 80 (271)
T ss_pred CCeEEEEeCccCCcC-----CCCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecC
Confidence 478999999999998 45678899999999999985 899999999999988864 333589999999999764
Q ss_pred CCcccCCC---CCCcccccccCCccccccccccccchHHHHHHHHHHHh---------------hhccCce-----eee-
Q 015439 192 DHTVSDDH---PNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENT---------------KSIKGAK-----VEN- 247 (406)
Q Consensus 192 ~~~~~~~~---~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~---------------~~~~g~~-----vE~- 247 (406)
+......+ ...++ . +.+.++.+.+.... ....+.. ++.
T Consensus 81 ~~~~~~~~~~~~~~l~--------------~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (271)
T PRK03669 81 QWQDHPDFPRIISGIS--------------H----GEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARL 142 (271)
T ss_pred cccCCCCceEeecCCC--------------H----HHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhc
Confidence 31100000 00000 0 11111111111000 0000000 000
Q ss_pred cceeEEEEeeecCCCCHHHHHHHHHHHHhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCC---CCCCCccEEEE
Q 015439 248 HKFCVSVHYRNVDEKSWPTIAQCVHDVLKDYPRLRLTHGRKVLEIRPVIDWNKGKAVEFLLESLGL---SDSDDVLPIYI 324 (406)
Q Consensus 248 ~~~~l~~h~r~~d~~~~~~l~~~l~~~l~~~p~l~v~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~---~~~~~~~viai 324 (406)
......+.+. .. .+....+.+.+... ++.++++..++||.|+ |+|||+|+++|++++|+ +.+ .+++|
T Consensus 143 ~~~~~~~~~~--~~---~~~~~~~~~~l~~~-~~~~~~~~~~iEi~~~-g~sKg~al~~l~~~lgi~~~~~~---~viaf 212 (271)
T PRK03669 143 HEASVTLIWR--DS---DERMAQFTARLAEL-GLQFVQGARFWHVLDA-SAGKDQAANWLIATYQQLSGTRP---TTLGL 212 (271)
T ss_pred cccCceeEec--CC---HHHHHHHHHHHHHC-CCEEEecCeeEEEecC-CCCHHHHHHHHHHHHHhhcCCCc---eEEEE
Confidence 0001111111 11 12223343344332 4676666679999999 99999999999999999 765 79999
Q ss_pred eCCcCCHHHHHHHHhCCCceEEEecCCCCC--------ccceEEeC--CHHHHHHHHHHHHHh
Q 015439 325 GDDRTDEDAFKVLRKGNRGYGILVSSVPKE--------TKAFYSLR--DPSEVQEFLLSLVRW 377 (406)
Q Consensus 325 GD~~NDedMf~~~~~~~~G~gVaVgna~~~--------t~A~y~l~--~~~eV~~fL~~L~~~ 377 (406)
||+.||++||+.+ |+||||+|+..+ ..|.|+++ +++|+.+.|++++..
T Consensus 213 GDs~NDi~Ml~~a-----g~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~~ 270 (271)
T PRK03669 213 GDGPNDAPLLDVM-----DYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDHFFSA 270 (271)
T ss_pred cCCHHHHHHHHhC-----CEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHHHHhc
Confidence 9999999999997 899999986632 25889886 567999999988753
No 17
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.96 E-value=8.1e-29 Score=239.09 Aligned_cols=237 Identities=18% Similarity=0.228 Sum_probs=146.6
Q ss_pred CEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC-C-cCceEEccCCceEeCCCCC
Q 015439 117 KIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG-L-TELYYAGSHGMDIMGPVDH 193 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~-l-~~~~li~~nGa~I~~~~~~ 193 (406)
.++||+|+||||++ ++..++++++++|++|++++ .|+|+|||++..+.+++. + ...++|++||+.|+...+.
T Consensus 2 ~kli~~DlDGTLl~-----~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~ 76 (272)
T PRK15126 2 ARLAAFDMDGTLLM-----PDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGE 76 (272)
T ss_pred ccEEEEeCCCcCcC-----CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCC
Confidence 46999999999998 45679999999999999995 899999999999988864 2 2347899999999975443
Q ss_pred cccCCCCCCccc----ccc---cCCccccccccccccc-hHHHHHHHHHHHhhhccCce-----eeecceeEEEEeeecC
Q 015439 194 TVSDDHPNSIKS----TDQ---QGKEVNLFQPAREFLP-MIDEVFRTLVENTKSIKGAK-----VENHKFCVSVHYRNVD 260 (406)
Q Consensus 194 ~~~~~~~~~~~~----~~~---~~~~~~l~~~a~~~~~-~i~~v~~~l~~~~~~~~g~~-----vE~~~~~l~~h~r~~d 260 (406)
.+.. .....+. .+. .+....++.....+.. ....+..... ....+... +....+ ..+.+. .+
T Consensus 77 ~l~~-~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~ki~~~-~~ 151 (272)
T PRK15126 77 LLHR-QDLPADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHV--YSGFRYQLIDLKRLPAHGV-TKICFC-GD 151 (272)
T ss_pred EEEe-ecCCHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHH--hcCCceEEecHHHccccCc-eEEEEE-CC
Confidence 2211 1100000 000 0000011111110100 0011110000 00000000 000000 001111 11
Q ss_pred CCCHHHHHHHHHHHHhh-CC-CeEEE-ecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHH
Q 015439 261 EKSWPTIAQCVHDVLKD-YP-RLRLT-HGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 261 ~~~~~~l~~~l~~~l~~-~p-~l~v~-~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~ 337 (406)
+ +..+.+.+.+.+ ++ .+.+. ++..++||.|+ |+|||+||++|++.+|++.+ ++++|||+.||++||+.+
T Consensus 152 ~----~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~-g~sKg~al~~l~~~~gi~~~---~v~afGD~~NDi~Ml~~a 223 (272)
T PRK15126 152 H----DDLTRLQIQLNEALGERAHLCFSATDCLEVLPV-GCNKGAALAVLSQHLGLSLA---DCMAFGDAMNDREMLGSV 223 (272)
T ss_pred H----HHHHHHHHHHHHHhcCCEEEEEcCCcEEEeecC-CCChHHHHHHHHHHhCCCHH---HeEEecCCHHHHHHHHHc
Confidence 1 112233333322 22 35554 55679999999 99999999999999999886 799999999999999997
Q ss_pred HhCCCceEEEecCCCCC--ccceE--EeC--CHHHHHHHHHHHHH
Q 015439 338 RKGNRGYGILVSSVPKE--TKAFY--SLR--DPSEVQEFLLSLVR 376 (406)
Q Consensus 338 ~~~~~G~gVaVgna~~~--t~A~y--~l~--~~~eV~~fL~~L~~ 376 (406)
|+||||+||.++ ..|+| ++. +.++|+++|++++.
T Consensus 224 -----g~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~ 263 (272)
T PRK15126 224 -----GRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLD 263 (272)
T ss_pred -----CCceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence 899999999865 45665 554 56789999999873
No 18
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.96 E-value=3.7e-28 Score=228.19 Aligned_cols=212 Identities=21% Similarity=0.240 Sum_probs=146.1
Q ss_pred CEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC-C-cCceEEccCCceEeCCC-C
Q 015439 117 KIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG-L-TELYYAGSHGMDIMGPV-D 192 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~-l-~~~~li~~nGa~I~~~~-~ 192 (406)
.++||+|+||||++ ++..++++++++|++|++.+ +|+|+|||++..+.+++. + .+.++|++||+.|+.+. +
T Consensus 3 ~kli~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~ 77 (230)
T PRK01158 3 IKAIAIDIDGTITD-----KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDG 77 (230)
T ss_pred eeEEEEecCCCcCC-----CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCC
Confidence 57999999999998 45679999999999999985 899999999999887653 2 23579999999998753 2
Q ss_pred CcccCCCCCCcccccccCCccccccccccccchHHHHHHHHHHHhhhccCc--eeee--cceeE--EEEeeecCCCCHHH
Q 015439 193 HTVSDDHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENTKSIKGA--KVEN--HKFCV--SVHYRNVDEKSWPT 266 (406)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~~~~~g~--~vE~--~~~~l--~~h~r~~d~~~~~~ 266 (406)
..+. . .+ ++...++.+.+... .+.. .+.. ..... ...++ ...
T Consensus 78 ~~~~---~----------------~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---~~~--- 125 (230)
T PRK01158 78 KRIF---L----------------GD----IEECEKAYSELKKR---FPEASTSLTKLDPDYRKTEVALRR---TVP--- 125 (230)
T ss_pred CEEE---E----------------cc----hHHHHHHHHHHHHh---ccccceeeecCCcccccceeeecc---ccc---
Confidence 2110 0 00 01122222222111 1110 0000 00000 00111 111
Q ss_pred HHHHHHHHHhhCC-CeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceE
Q 015439 267 IAQCVHDVLKDYP-RLRLTHGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYG 345 (406)
Q Consensus 267 l~~~l~~~l~~~p-~l~v~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~g 345 (406)
.+.+.+.++++. .+.++.+...+||.|+ ++|||.|+++|++++|++.+ ++++|||+.||++||+.+ |+|
T Consensus 126 -~~~~~~~l~~~~~~~~~~~~~~~~ei~~~-~~~Kg~al~~l~~~~~i~~~---~~i~~GD~~NDi~m~~~a-----g~~ 195 (230)
T PRK01158 126 -VEEVRELLEELGLDLEIVDSGFAIHIKSP-GVNKGTGLKKLAELMGIDPE---EVAAIGDSENDLEMFEVA-----GFG 195 (230)
T ss_pred -HHHHHHHHHHcCCcEEEEecceEEEEeeC-CCChHHHHHHHHHHhCCCHH---HEEEECCchhhHHHHHhc-----Cce
Confidence 123344444442 3556656678999999 99999999999999999875 799999999999999997 899
Q ss_pred EEecCCCCC--ccceEEeC--CHHHHHHHHHHHH
Q 015439 346 ILVSSVPKE--TKAFYSLR--DPSEVQEFLLSLV 375 (406)
Q Consensus 346 VaVgna~~~--t~A~y~l~--~~~eV~~fL~~L~ 375 (406)
|+|+||.++ ..|+|++. +.++|+++|+++.
T Consensus 196 vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 196 VAVANADEELKEAADYVTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred EEecCccHHHHHhcceEecCCCcChHHHHHHHHh
Confidence 999999864 67999985 5578999998764
No 19
>PLN02887 hydrolase family protein
Probab=99.95 E-value=1.5e-27 Score=250.72 Aligned_cols=246 Identities=19% Similarity=0.210 Sum_probs=149.7
Q ss_pred HHhccCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC---Cc-C-------ce
Q 015439 111 SEAKKKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG---LT-E-------LY 178 (406)
Q Consensus 111 ~~~~~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~---l~-~-------~~ 178 (406)
.+-+.+.++||+|+||||++ ++..++++++++|+++++++ .|+|||||++..+..++. +. . .+
T Consensus 302 ~~~~~~iKLIa~DLDGTLLn-----~d~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p 376 (580)
T PLN02887 302 RFYKPKFSYIFCDMDGTLLN-----SKSQISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISESSP 376 (580)
T ss_pred hhhccCccEEEEeCCCCCCC-----CCCccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeeccc
Confidence 35566788999999999998 56789999999999999995 899999999999988763 22 1 25
Q ss_pred EEccCCceEeCCCCCcccCCCCC---Cccccc---ccCCccccccccccccchHHHHHHHHHHHhhhccCcee-------
Q 015439 179 YAGSHGMDIMGPVDHTVSDDHPN---SIKSTD---QQGKEVNLFQPAREFLPMIDEVFRTLVENTKSIKGAKV------- 245 (406)
Q Consensus 179 li~~nGa~I~~~~~~~~~~~~~~---~~~~~~---~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~~~~~g~~v------- 245 (406)
+|++||+.|+...+..+...... ..+..+ ..+....++.....|..........+...........+
T Consensus 377 ~I~~NGA~I~d~~g~~I~~~~L~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 456 (580)
T PLN02887 377 GVFLQGLLVYGRQGREIYRSNLDQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQLL 456 (580)
T ss_pred EEeecCeEEEECCCcEEEEEeCCHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHHHhh
Confidence 67789999986444322111000 000000 00000011111111100000000000000000000000
Q ss_pred eecceeEEEEeeecCCCCHHHHHHHHHHHHh-hCC-CeEEE-ecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEE
Q 015439 246 ENHKFCVSVHYRNVDEKSWPTIAQCVHDVLK-DYP-RLRLT-HGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPI 322 (406)
Q Consensus 246 E~~~~~l~~h~r~~d~~~~~~l~~~l~~~l~-~~p-~l~v~-~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~vi 322 (406)
....+. .+-+.. .+ +...+.+...+. .+. .+.++ ++..++||.|+ |+|||.||++|++++|++.+ +++
T Consensus 457 ~~~~i~-Ki~~~~-~~---e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~-gvSKG~ALk~L~e~lGI~~e---evi 527 (580)
T PLN02887 457 AAADIQ-KVIFLD-TA---EGVSSVLRPYWSEATGDRANVVQAQPDMLEIVPP-GTSKGNGVKMLLNHLGVSPD---EIM 527 (580)
T ss_pred cccCee-EEEEEc-Ch---HHHHHHHHHHHHHHhcCcEEEEEecCcEEEEecC-CCCHHHHHHHHHHHcCCCHH---HEE
Confidence 000110 011111 11 111122222222 222 35544 56789999999 99999999999999999986 799
Q ss_pred EEeCCcCCHHHHHHHHhCCCceEEEecCCCCC--ccceEEeC--CHHHHHHHHHHHH
Q 015439 323 YIGDDRTDEDAFKVLRKGNRGYGILVSSVPKE--TKAFYSLR--DPSEVQEFLLSLV 375 (406)
Q Consensus 323 aiGD~~NDedMf~~~~~~~~G~gVaVgna~~~--t~A~y~l~--~~~eV~~fL~~L~ 375 (406)
+|||+.||++||+.+ |+||||+||.++ ..|+|++. +.++|+++|++++
T Consensus 528 AFGDs~NDIeMLe~A-----G~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 528 AIGDGENDIEMLQLA-----SLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred EEecchhhHHHHHHC-----CCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhh
Confidence 999999999999997 899999999864 67999985 5678999999874
No 20
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.95 E-value=1.2e-27 Score=220.88 Aligned_cols=200 Identities=23% Similarity=0.308 Sum_probs=141.5
Q ss_pred EEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhCCcCceEEccCCceEeCCCCCcccC
Q 015439 119 AIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVGLTELYYAGSHGMDIMGPVDHTVSD 197 (406)
Q Consensus 119 lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~l~~~~li~~nGa~I~~~~~~~~~~ 197 (406)
+|++||||||++. +...++++++++|++|++++ .|+|+|||++..+.++++..+.+++++||+.|+.+++....
T Consensus 1 li~~D~DgTL~~~----~~~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~- 75 (204)
T TIGR01484 1 LLFFDLDGTLLDP----NAHELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYI- 75 (204)
T ss_pred CEEEeCcCCCcCC----CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEE-
Confidence 5899999999982 22679999999999999994 89999999999999998754578999999999876533210
Q ss_pred CCCCCcccccccCCccccccccccccchHHHHHHHHHHHhhhccCceeeecceeEEEEeeec--CCCCHHHHHHHHHHHH
Q 015439 198 DHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENTKSIKGAKVENHKFCVSVHYRNV--DEKSWPTIAQCVHDVL 275 (406)
Q Consensus 198 ~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~~~~~g~~vE~~~~~l~~h~r~~--d~~~~~~l~~~l~~~l 275 (406)
.+. +....++...+.+...+..+....++..+|.+..+++++++.. .+.....+...++...
T Consensus 76 ~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (204)
T TIGR01484 76 EPS----------------DVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIG 139 (204)
T ss_pred ccc----------------ccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhc
Confidence 000 0000011100111111111123456677788888999998864 1111122223333222
Q ss_pred hhCCCeEEE-ecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEe
Q 015439 276 KDYPRLRLT-HGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILV 348 (406)
Q Consensus 276 ~~~p~l~v~-~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaV 348 (406)
...+++.++ ++..++||+|+ |++||.|+++++++++++.+ ++++|||+.||++||+.+ |++|+|
T Consensus 140 ~~~~~~~~~~s~~~~~ev~p~-~~~K~~~~~~~~~~~~~~~~---~~~~~GD~~nD~~~~~~~-----~~~vam 204 (204)
T TIGR01484 140 RNDLELEAIYVGKTDLEVLPA-GVDKGSALQALLKELNGKRD---EILAFGDSGNDEEMFEVA-----GLAVAV 204 (204)
T ss_pred cccCcEEEEEecCCEEEEecC-CCChHHHHHHHHHHhCCCHH---HEEEEcCCHHHHHHHHHc-----CCceEC
Confidence 113457777 68999999999 99999999999999998765 899999999999999997 899987
No 21
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.94 E-value=7.6e-27 Score=219.28 Aligned_cols=211 Identities=25% Similarity=0.367 Sum_probs=140.2
Q ss_pred EEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhCCc--CceEEccCCceEeCCCCCccc
Q 015439 120 IFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVGLT--ELYYAGSHGMDIMGPVDHTVS 196 (406)
Q Consensus 120 I~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~l~--~~~li~~nGa~I~~~~~~~~~ 196 (406)
||+|+||||++ ++..++++++++|++|++.+ .++|+|||++..+.++++.. ..++|++||+.|..+.+..+.
T Consensus 1 i~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~ 75 (254)
T PF08282_consen 1 IFSDLDGTLLN-----SDGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILY 75 (254)
T ss_dssp EEEECCTTTCS-----TTSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEE
T ss_pred cEEEECCceec-----CCCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccch
Confidence 68999999999 55679999999999999885 89999999999999998632 369999999999444443221
Q ss_pred CCCCCCcccccccCCccccccccccccchHHHHHHHHHHHh-----hhccCceeeec-----------------------
Q 015439 197 DDHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENT-----KSIKGAKVENH----------------------- 248 (406)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~-----~~~~g~~vE~~----------------------- 248 (406)
.+. +. ...+..+.+.+...- ....+.++...
T Consensus 76 -~~~--i~------------------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (254)
T PF08282_consen 76 -EKP--ID------------------SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSED 134 (254)
T ss_dssp -EES--B-------------------HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHH
T ss_pred -hhh--ee------------------ccchhheeehhhhcccccccccceeeecccccccchhhhhhccccccccccccc
Confidence 000 00 011122222221100 00000000000
Q ss_pred ------ceeEEEEeeecCCCCHHHHHHHHHHHHhhCCC-eE-EEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCcc
Q 015439 249 ------KFCVSVHYRNVDEKSWPTIAQCVHDVLKDYPR-LR-LTHGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVL 320 (406)
Q Consensus 249 ------~~~l~~h~r~~d~~~~~~l~~~l~~~l~~~p~-l~-v~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~ 320 (406)
-..+.++. +.+....+.+.+. +.+++ +. +.++..++||.|+ ++|||.|+++|++.+|++.+ .
T Consensus 135 ~~~~~~i~ki~~~~---~~~~~~~l~~~l~---~~~~~~~~~~~~~~~~lei~~~-~vsK~~ai~~l~~~~~i~~~---~ 204 (254)
T PF08282_consen 135 DLEDEEIFKILFFP---DPEDLEQLREELK---KKFPNLIDVVRSSPYFLEITPK-GVSKGSAIKYLLEYLGISPE---D 204 (254)
T ss_dssp HHHCSSESEEEEES---CHHHHHHHHHHHH---HHHTTTEEEEEEETTEEEEEET-TSSHHHHHHHHHHHHTTSGG---G
T ss_pred ccccccceeeeccc---cchhhhhhhhhhc---cccCcceeEEEecccceEEeeC-CCCHHHHHHHHhhhcccccc---e
Confidence 01111111 1111122222222 33333 23 4567899999999 99999999999999999886 7
Q ss_pred EEEEeCCcCCHHHHHHHHhCCCceEEEecCCCCC--ccceEEeCC--HHHHHHHH
Q 015439 321 PIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPKE--TKAFYSLRD--PSEVQEFL 371 (406)
Q Consensus 321 viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~~--t~A~y~l~~--~~eV~~fL 371 (406)
+++|||+.||++||+.+ |+||+|+||.++ ..|+|++.+ .++|+++|
T Consensus 205 ~~~~GD~~ND~~Ml~~~-----~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 205 IIAFGDSENDIEMLELA-----GYSVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp EEEEESSGGGHHHHHHS-----SEEEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred eEEeecccccHhHHhhc-----CeEEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 99999999999999997 899999999865 689999863 36888875
No 22
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.94 E-value=2.7e-26 Score=220.71 Aligned_cols=239 Identities=16% Similarity=0.190 Sum_probs=144.9
Q ss_pred CEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC-C-cCceEEccCCceEeCCC-C
Q 015439 117 KIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG-L-TELYYAGSHGMDIMGPV-D 192 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~-l-~~~~li~~nGa~I~~~~-~ 192 (406)
.++||+|+||||++ ++..++++++++|+++++++ .|+|||||++..+..++. + ...++|++||+.|+... +
T Consensus 3 ~kli~~DlDGTLl~-----~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~ 77 (272)
T PRK10530 3 YRVIALDLDGTLLT-----PKKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAK 77 (272)
T ss_pred ccEEEEeCCCceEC-----CCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCC
Confidence 57999999999998 55679999999999999995 899999999999888764 2 23479999999999743 3
Q ss_pred CcccCCCCCCccc----cc---ccCCccccccccccccc-hHHHHHHHHHHHhhhccC----ceee---------eccee
Q 015439 193 HTVSDDHPNSIKS----TD---QQGKEVNLFQPAREFLP-MIDEVFRTLVENTKSIKG----AKVE---------NHKFC 251 (406)
Q Consensus 193 ~~~~~~~~~~~~~----~~---~~~~~~~l~~~a~~~~~-~i~~v~~~l~~~~~~~~g----~~vE---------~~~~~ 251 (406)
..+.. +....+. .+ ..+....++.....+.. ....+... ..+....+. .+.. .....
T Consensus 78 ~~l~~-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
T PRK10530 78 KVLEA-DPLPVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRT-LNWAQTLPPEQRPTFTQVDSLAQAARQVNAI 155 (272)
T ss_pred EEEEe-cCCCHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHH-hhhhhccchhcccceEEcccHHHHHhhcCCc
Confidence 32211 1100000 00 00000000000000000 00000000 000000000 0000 00000
Q ss_pred EEEEeeecCCCCHHHHHHHHHHHHhhCCCeEEE-ecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCC
Q 015439 252 VSVHYRNVDEKSWPTIAQCVHDVLKDYPRLRLT-HGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTD 330 (406)
Q Consensus 252 l~~h~r~~d~~~~~~l~~~l~~~l~~~p~l~v~-~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~ND 330 (406)
+.+-.. .+. ...+.+..+.+.+.+ ++.++ ++..++||.|+ +++||.|++++++++|++.+ ++++|||+.||
T Consensus 156 ~~i~~~--~~~-~~~~~~~~~~~~~~~-~~~~~~s~~~~~ei~~~-~~~K~~~l~~l~~~~gi~~~---e~i~~GD~~ND 227 (272)
T PRK10530 156 WKFALT--HED-LPQLQHFAKHVEHEL-GLECEWSWHDQVDIARK-GNSKGKRLTQWVEAQGWSMK---NVVAFGDNFND 227 (272)
T ss_pred EEEEEe--cCC-HHHHHHHHHHHhhhc-CceEEEecCceEEEecC-CCChHHHHHHHHHHcCCCHH---HeEEeCCChhh
Confidence 001000 110 011222222333333 34433 45568999999 99999999999999999876 79999999999
Q ss_pred HHHHHHHHhCCCceEEEecCCCCC--ccceEEeC--CHHHHHHHHHHHH
Q 015439 331 EDAFKVLRKGNRGYGILVSSVPKE--TKAFYSLR--DPSEVQEFLLSLV 375 (406)
Q Consensus 331 edMf~~~~~~~~G~gVaVgna~~~--t~A~y~l~--~~~eV~~fL~~L~ 375 (406)
++||+.+ |+||+|+|+.++ ..|+|++. +.++|.++|++++
T Consensus 228 i~m~~~a-----g~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 228 ISMLEAA-----GLGVAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred HHHHHhc-----CceEEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 9999997 899999998754 57999885 4578999999874
No 23
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.94 E-value=4.7e-26 Score=217.36 Aligned_cols=228 Identities=21% Similarity=0.240 Sum_probs=151.9
Q ss_pred CEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHh---CC-cCceEEccCCceEeCCC
Q 015439 117 KIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELV---GL-TELYYAGSHGMDIMGPV 191 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~---~l-~~~~li~~nGa~I~~~~ 191 (406)
+.+|++||||||+++.+ .+..++++++++++++.+++ .|+++|||++..+.++. ++ .+.++|++||+.|+.++
T Consensus 1 ~~li~tDlDGTLl~~~~--~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~ 78 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTD--GDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGG 78 (249)
T ss_pred CeEEEEcCCCcCcCCCC--CChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCC
Confidence 46899999999998543 23668899999999999986 99999999999999884 43 23468999999998754
Q ss_pred CCcccCCCCCCcccccccCCccccccccccccchHHHHHHHHHHHhhhccCceeeecceeEEEEeeecCCCCHHHHHHHH
Q 015439 192 DHTVSDDHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENTKSIKGAKVENHKFCVSVHYRNVDEKSWPTIAQCV 271 (406)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~~~~~g~~vE~~~~~l~~h~r~~d~~~~~~l~~~l 271 (406)
.......|.. + ....|. .+.+......+....+....+.+.+.+.+... .+....+.+.+
T Consensus 79 ~~~~~~~~~~--------------~-~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~---~~~~~~~~~~l 138 (249)
T TIGR01485 79 AEVPDQHWAE--------------Y-LSEKWQ--RDIVVAITDKFEELKPQPDLEQRPHKVSFFLD---PEAAPEVIKQL 138 (249)
T ss_pred CCcCCHHHHH--------------H-HhcccC--HHHHHHHHhcCcccccCCccccCCeeEEEEec---hhhhhHHHHHH
Confidence 2210000100 0 001111 12222222111111222223333444554432 22223345556
Q ss_pred HHHHhhCC-CeEE-EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEec
Q 015439 272 HDVLKDYP-RLRL-THGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVS 349 (406)
Q Consensus 272 ~~~l~~~p-~l~v-~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVg 349 (406)
.+.+..+. .+.+ .++..++||.|+ +++||.|+++|++.+|++.+ .+++|||+.||++||+.+ .+++|+|+
T Consensus 139 ~~~l~~~~~~~~~~~~~~~~ldi~~~-~~~K~~al~~l~~~~~i~~~---~~i~~GD~~ND~~ml~~~----~~~~va~~ 210 (249)
T TIGR01485 139 TEMLKETGLDVKLIYSSGKDLDILPQ-GSGKGQALQYLLQKLAMEPS---QTLVCGDSGNDIELFEIG----SVRGVIVS 210 (249)
T ss_pred HHHHHhcCCCEEEEEECCceEEEEeC-CCChHHHHHHHHHHcCCCcc---CEEEEECChhHHHHHHcc----CCcEEEEC
Confidence 66665543 2443 567789999999 99999999999999999875 799999999999999984 26899999
Q ss_pred CCCCCcc---------ceEEeC--CHHHHHHHHHHH
Q 015439 350 SVPKETK---------AFYSLR--DPSEVQEFLLSL 374 (406)
Q Consensus 350 na~~~t~---------A~y~l~--~~~eV~~fL~~L 374 (406)
|+.++-. ..|+.+ .++|+++.|+++
T Consensus 211 na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~~ 246 (249)
T TIGR01485 211 NAQEELLQWYDENAKDKIYHASERCAGGIIEAIAHF 246 (249)
T ss_pred CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHHc
Confidence 9975422 226665 468888888765
No 24
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.94 E-value=5.3e-26 Score=212.64 Aligned_cols=211 Identities=22% Similarity=0.256 Sum_probs=138.9
Q ss_pred EEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC-C-cCceEEccCCceEeCCCCCccc
Q 015439 120 IFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG-L-TELYYAGSHGMDIMGPVDHTVS 196 (406)
Q Consensus 120 I~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~-l-~~~~li~~nGa~I~~~~~~~~~ 196 (406)
|++|+||||++ +...++++++++|++|++.+ +|+|+|||++..+..++. + ...++|++||+.|+...+...
T Consensus 1 i~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~- 74 (225)
T TIGR01482 1 IASDIDGTLTD-----PNRAINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDD- 74 (225)
T ss_pred CeEeccCccCC-----CCcccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCce-
Confidence 58999999998 45679999999999999995 899999999999888764 2 246899999999987543210
Q ss_pred CCCCCCcccccccCCccccccccccccc-hHHHHHHHHHHHhhhccCceeeecceeEEEEeeecCCCCHHHHHHHHHHHH
Q 015439 197 DDHPNSIKSTDQQGKEVNLFQPAREFLP-MIDEVFRTLVENTKSIKGAKVENHKFCVSVHYRNVDEKSWPTIAQCVHDVL 275 (406)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~l~~~a~~~~~-~i~~v~~~l~~~~~~~~g~~vE~~~~~l~~h~r~~d~~~~~~l~~~l~~~l 275 (406)
.|.... ...|.. .+......+.......+ .. ..+.......+ .+.+..++
T Consensus 75 -~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~-------~~~~~~~~ 125 (225)
T TIGR01482 75 -IFLAYL---------------EEEWFLDIVIAKTFPFSRLKVQYP----RR--ASLVKMRYGID-------VDTVREII 125 (225)
T ss_pred -EEeccc---------------CHHHHHHHHHhcccchhhhccccc----cc--cceEEEeecCC-------HHHHHHHH
Confidence 011000 000100 00000000000000000 00 00000010011 11223333
Q ss_pred hhCC-CeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCCC
Q 015439 276 KDYP-RLRLTHGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPKE 354 (406)
Q Consensus 276 ~~~p-~l~v~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~~ 354 (406)
+.+. .+.+.++..++||.|+ +++||.|+++|++++|++.+ .+++|||+.||++||+.+ |+||+|+||.++
T Consensus 126 ~~~~~~~~~~~~~~~~ei~~~-~~~K~~~i~~l~~~~~i~~~---~~i~~GD~~NDi~m~~~a-----g~~vam~Na~~~ 196 (225)
T TIGR01482 126 KELGLNLVAVDSGFDIHILPQ-GVNKGVAVKKLKEKLGIKPG---ETLVCGDSENDIDLFEVP-----GFGVAVANAQPE 196 (225)
T ss_pred HhcCceEEEecCCcEEEEeeC-CCCHHHHHHHHHHHhCCCHH---HEEEECCCHhhHHHHHhc-----CceEEcCChhHH
Confidence 3332 2333455679999999 99999999999999999875 799999999999999997 899999999864
Q ss_pred --ccceEEeC--CHHH----HHHHHHHH
Q 015439 355 --TKAFYSLR--DPSE----VQEFLLSL 374 (406)
Q Consensus 355 --t~A~y~l~--~~~e----V~~fL~~L 374 (406)
..|+|++. +.++ |.++|+++
T Consensus 197 ~k~~A~~vt~~~~~~G~~~~v~~~l~~~ 224 (225)
T TIGR01482 197 LKEWADYVTESPYGEGGAEAIGEILQAI 224 (225)
T ss_pred HHHhcCeecCCCCCCcHHHHHHHHHHhh
Confidence 67999985 4467 88888765
No 25
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.94 E-value=8.6e-26 Score=210.65 Aligned_cols=207 Identities=23% Similarity=0.254 Sum_probs=139.8
Q ss_pred EEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC-Cc-CceEEccCCceEeCCCCCc
Q 015439 118 IAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG-LT-ELYYAGSHGMDIMGPVDHT 194 (406)
Q Consensus 118 ~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~-l~-~~~li~~nGa~I~~~~~~~ 194 (406)
++||+|+||||++ ++..++++++++|++|++.+ +|+|+|||++..+..++. +. ..++|++||+.|+......
T Consensus 2 k~v~~DlDGTLl~-----~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~ 76 (215)
T TIGR01487 2 KLVAIDIDGTLTE-----PNRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDI 76 (215)
T ss_pred cEEEEecCCCcCC-----CCcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcE
Confidence 5899999999998 55679999999999999985 899999999999988764 22 3479999999999765321
Q ss_pred ccCCCCCCcccccccCCccccccccccccchHHHHHHHHHHHhhhccCceeeecceeEEEEeeecCCCCHHHHHHHHHHH
Q 015439 195 VSDDHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENTKSIKGAKVENHKFCVSVHYRNVDEKSWPTIAQCVHDV 274 (406)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~~~~~g~~vE~~~~~l~~h~r~~d~~~~~~l~~~l~~~ 274 (406)
.. .+ . ....+....... .... ... .. ........+. ..... .+.+...
T Consensus 77 ~~--~~-------~---------~~~~~~~~~~~~-~~~~---~~~-~~--~~~~~~~~~~---~~~~~----~~~~~~~ 124 (215)
T TIGR01487 77 FL--AN-------M---------EEEWFLDEEKKK-RFPR---DRL-SN--EYPRASLVIM---REGKD----VDEVREI 124 (215)
T ss_pred EE--ec-------c---------cchhhHHHhhhh-hhhh---hhc-cc--ccceeEEEEe---cCCcc----HHHHHHH
Confidence 10 00 0 000000000000 0000 000 00 0000111111 11111 1233334
Q ss_pred HhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCCC
Q 015439 275 LKDYPRLRLTHGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPKE 354 (406)
Q Consensus 275 l~~~p~l~v~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~~ 354 (406)
++.. ++.+..+...+||.|. +++||+|++++++.+|++.+ .+++|||+.||++||+.+ |+||+|+|+.++
T Consensus 125 l~~~-~~~~~~~~~~~ei~~~-~~~K~~~i~~l~~~~~i~~~---~~i~iGDs~ND~~ml~~a-----g~~vam~na~~~ 194 (215)
T TIGR01487 125 IKER-GLNLVDSGFAIHIMKK-GVDKGVGVEKLKELLGIKPE---EVAAIGDSENDIDLFRVV-----GFKVAVANADDQ 194 (215)
T ss_pred HHhC-CeEEEecCceEEEecC-CCChHHHHHHHHHHhCCCHH---HEEEECCCHHHHHHHHhC-----CCeEEcCCccHH
Confidence 4443 4666655678999999 99999999999999999875 799999999999999997 899999999764
Q ss_pred --ccceEEeC--CHHHHHHHH
Q 015439 355 --TKAFYSLR--DPSEVQEFL 371 (406)
Q Consensus 355 --t~A~y~l~--~~~eV~~fL 371 (406)
..|+|++. +.++|.++|
T Consensus 195 ~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 195 LKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHhCCEEcCCCCCchhhhhC
Confidence 57999985 456787764
No 26
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.94 E-value=1.2e-25 Score=212.70 Aligned_cols=217 Identities=18% Similarity=0.187 Sum_probs=146.0
Q ss_pred EEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhc-CCEEEEcCCChhhHHHHhC---Cc-CceEEccCCceEeCCCCC
Q 015439 119 AIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKY-FPTAIITGRSRDKVYELVG---LT-ELYYAGSHGMDIMGPVDH 193 (406)
Q Consensus 119 lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~-~~v~I~SGR~~~~l~~~~~---l~-~~~li~~nGa~I~~~~~~ 193 (406)
||++||||||++ ++..+++.. ++++ +.++ ..++|+|||++..+.++++ +. +.++|++||+.|+.+...
T Consensus 1 li~~DlDgTLl~-----~~~~~~~~~-~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~ 73 (236)
T TIGR02471 1 LIITDLDNTLLG-----DDEGLASFV-ELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPEL 73 (236)
T ss_pred CeEEeccccccC-----CHHHHHHHH-HHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCC
Confidence 589999999998 445677766 7776 5555 4899999999999999974 32 346999999999765422
Q ss_pred cccCCCCCCcccccccCCccccccccccccchHHHHHHHHHHHhhhccCceeeecc--eeEEEEeeecCCCCHHHHHHHH
Q 015439 194 TVSDDHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENTKSIKGAKVENHK--FCVSVHYRNVDEKSWPTIAQCV 271 (406)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~~~~~g~~vE~~~--~~l~~h~r~~d~~~~~~l~~~l 271 (406)
.....|.. .....|. ..++.+. ....++..++... ....++|+..+... ...+.+
T Consensus 74 ~~~~~~~~---------------~~~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~ 130 (236)
T TIGR02471 74 QPDRFWQK---------------HIDHDWR--RQAVVEA----LADIPGLTLQDDQEQGPFKISYLLDPEGE--PILPQI 130 (236)
T ss_pred CCChhHHH---------------HHhcCCC--HHHHHHH----HhcCCCcEeCChhcCCCeeEEEEECcccc--hHHHHH
Confidence 10000100 0000111 1122222 2345665555543 24566776533221 122334
Q ss_pred HHHHhhCC-CeEE-EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEec
Q 015439 272 HDVLKDYP-RLRL-THGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVS 349 (406)
Q Consensus 272 ~~~l~~~p-~l~v-~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVg 349 (406)
.+.++... .+.+ .++..++||.|+ +++||.|+++|++++|++.+ .+++|||+.||++||+.+ |+||+|+
T Consensus 131 ~~~l~~~~~~~~~~~~~~~~~ei~~~-~~~K~~al~~l~~~~g~~~~---~~i~~GD~~nD~~ml~~~-----~~~iav~ 201 (236)
T TIGR02471 131 RQRLRQQSQAAKVILSCGWFLDVLPL-RASKGLALRYLSYRWGLPLE---QILVAGDSGNDEEMLRGL-----TLGVVVG 201 (236)
T ss_pred HHHHHhccCCEEEEEECCceEEEeeC-CCChHHHHHHHHHHhCCCHH---HEEEEcCCccHHHHHcCC-----CcEEEEc
Confidence 44444332 2343 456678999999 99999999999999999875 799999999999999986 8999999
Q ss_pred CCCCC--ccce----EEeC--CHHHHHHHHHHH
Q 015439 350 SVPKE--TKAF----YSLR--DPSEVQEFLLSL 374 (406)
Q Consensus 350 na~~~--t~A~----y~l~--~~~eV~~fL~~L 374 (406)
|+.++ ..|+ |+++ +.++|.++|+++
T Consensus 202 na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~~ 234 (236)
T TIGR02471 202 NHDPELEGLRHQQRIYFANNPHAFGILEGINHY 234 (236)
T ss_pred CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHhh
Confidence 98864 4577 7775 457899999864
No 27
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.94 E-value=1e-25 Score=215.49 Aligned_cols=231 Identities=21% Similarity=0.291 Sum_probs=140.4
Q ss_pred EEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC-C-cCceEEccCCceEeCCCCCcc
Q 015439 119 AIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG-L-TELYYAGSHGMDIMGPVDHTV 195 (406)
Q Consensus 119 lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~-l-~~~~li~~nGa~I~~~~~~~~ 195 (406)
+||+|+||||++ ++..++++++++|++|++.+ .|+|+|||++..+..++. + ...++|++||+.|+..++..+
T Consensus 1 li~~DlDGTLl~-----~~~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i 75 (256)
T TIGR00099 1 LIFIDLDGTLLN-----DDHTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEIL 75 (256)
T ss_pred CEEEeCCCCCCC-----CCCccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEE
Confidence 589999999998 45679999999999999995 899999999999988774 2 234899999999998643322
Q ss_pred cCCCCCCccc-------ccccCCccccccccccccch-HHHHHHHHHHHhhhccCceee------ecceeEEEEeeecCC
Q 015439 196 SDDHPNSIKS-------TDQQGKEVNLFQPAREFLPM-IDEVFRTLVENTKSIKGAKVE------NHKFCVSVHYRNVDE 261 (406)
Q Consensus 196 ~~~~~~~~~~-------~~~~~~~~~l~~~a~~~~~~-i~~v~~~l~~~~~~~~g~~vE------~~~~~l~~h~r~~d~ 261 (406)
. ..+...+. ....+..+.++.....+... ............ ..+...+. ...+.... +. .++
T Consensus 76 ~-~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~-~~~ 151 (256)
T TIGR00099 76 Y-KKPLDLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFL-GEPKLEVVDIQYLPDDILKILL-LF-LDP 151 (256)
T ss_pred e-ecCCCHHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhc-cCCcceeccchhhhcccceEEE-EE-CCH
Confidence 1 11100000 00000000000000000000 000000000000 00000000 00010000 00 011
Q ss_pred CCHHHHHHHHHHHHh--hC-CCeEE-EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHH
Q 015439 262 KSWPTIAQCVHDVLK--DY-PRLRL-THGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 262 ~~~~~l~~~l~~~l~--~~-p~l~v-~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~ 337 (406)
+..+.+.+.+. .+ +.+.+ .++..++||.|+ |+|||.|++++++.+|++.+ .+++|||+.||++||+.+
T Consensus 152 ----~~~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~-~~~K~~~i~~~~~~~~~~~~---~~~~~GD~~nD~~m~~~~ 223 (256)
T TIGR00099 152 ----EDLDLLIEALNKLELEENVSVVSSGPYSIEITAK-GVSKGSALQSLAEALGISLE---DVIAFGDGMNDIEMLEAA 223 (256)
T ss_pred ----HHHHHHHHHhhhhhhcCCEEEEEecCceEEecCC-CCChHHHHHHHHHHcCCCHH---HEEEeCCcHHhHHHHHhC
Confidence 11223333333 12 34655 467789999999 99999999999999999875 799999999999999997
Q ss_pred HhCCCceEEEecCCCCC--ccceEEeC--CHHHHHHHH
Q 015439 338 RKGNRGYGILVSSVPKE--TKAFYSLR--DPSEVQEFL 371 (406)
Q Consensus 338 ~~~~~G~gVaVgna~~~--t~A~y~l~--~~~eV~~fL 371 (406)
|++|+|+|++++ ..|+|++. +.++|+++|
T Consensus 224 -----~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 224 -----GYGVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred -----CceeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 899999998754 57999986 446787764
No 28
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.93 E-value=1.4e-25 Score=214.77 Aligned_cols=219 Identities=19% Similarity=0.239 Sum_probs=140.2
Q ss_pred EEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC-Cc-CceEEccCCceEeCCCCCcc
Q 015439 119 AIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG-LT-ELYYAGSHGMDIMGPVDHTV 195 (406)
Q Consensus 119 lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~-l~-~~~li~~nGa~I~~~~~~~~ 195 (406)
+||+|+||||+. +.....+.++++|++|++.+ +|+|+|||++..+..++. +. ..++|++||+.|+.+.+...
T Consensus 1 li~~DlDGTll~-----~~~~~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~ 75 (256)
T TIGR01486 1 WIFTDLDGTLLD-----PHGYDWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFT 75 (256)
T ss_pred CEEEcCCCCCcC-----CCCcCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCccc
Confidence 589999999998 33324446999999999985 899999999999988874 21 35899999999998654321
Q ss_pred cCC-CCCCcccccccCCccccccccccccchHHHHHHHHHHHh---------------hhccCce------eeecceeEE
Q 015439 196 SDD-HPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENT---------------KSIKGAK------VENHKFCVS 253 (406)
Q Consensus 196 ~~~-~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~---------------~~~~g~~------vE~~~~~l~ 253 (406)
... |. . .... . ...+.++.+.+.... ....+.. .....+...
T Consensus 76 ~~~~~~--~-~~~i--------~-----~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (256)
T TIGR01486 76 EPEYPV--I-ALGI--------P-----YEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSET 139 (256)
T ss_pred CCCeEE--E-EcCC--------C-----HHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCc
Confidence 000 00 0 0000 0 011122222111000 0000000 000001000
Q ss_pred EEeeecCCCCHHHHHHHHHHHHhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCC--CCCCccEEEEeCCcCCH
Q 015439 254 VHYRNVDEKSWPTIAQCVHDVLKDYPRLRLTHGRKVLEIRPVIDWNKGKAVEFLLESLGLS--DSDDVLPIYIGDDRTDE 331 (406)
Q Consensus 254 ~h~r~~d~~~~~~l~~~l~~~l~~~p~l~v~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~--~~~~~~viaiGD~~NDe 331 (406)
. +. + .+..+.+.+.+.+. ++.++.+..++||.|+ +++||.|+++|++.+|++ .+ .+++|||+.||+
T Consensus 140 ~-~~--~----~~~~~~~~~~~~~~-~~~~~~s~~~~ei~~~-~~~Kg~ai~~l~~~~~i~~~~~---~~~a~GD~~ND~ 207 (256)
T TIGR01486 140 I-LW--S----EERRERFTEALVEL-GLEVTHGNRFYHVLGA-GSDKGKAANALKQFYNQPGGAI---KVVGLGDSPNDL 207 (256)
T ss_pred e-ec--C----hHHHHHHHHHHHHc-CCEEEeCCceEEEecC-CCCHHHHHHHHHHHHhhcCCCc---eEEEEcCCHhhH
Confidence 1 11 1 12233444445443 4666666679999999 999999999999999998 54 799999999999
Q ss_pred HHHHHHHhCCCceEEEecCCCC---C--cc--c-eEEeC--CHHHHHHHHHHHH
Q 015439 332 DAFKVLRKGNRGYGILVSSVPK---E--TK--A-FYSLR--DPSEVQEFLLSLV 375 (406)
Q Consensus 332 dMf~~~~~~~~G~gVaVgna~~---~--t~--A-~y~l~--~~~eV~~fL~~L~ 375 (406)
+||+.+ |+||+|+||++ + .. | .|++. +.+||++.|++++
T Consensus 208 ~Ml~~a-----g~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~~~ 256 (256)
T TIGR01486 208 PLLEVV-----DLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEHLL 256 (256)
T ss_pred HHHHHC-----CEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHHhC
Confidence 999997 99999999973 2 33 3 48874 5689999998763
No 29
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.92 E-value=7.6e-24 Score=204.84 Aligned_cols=232 Identities=19% Similarity=0.241 Sum_probs=145.0
Q ss_pred CEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhCC--cCceEEccCCceEeCCCCC
Q 015439 117 KIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVGL--TELYYAGSHGMDIMGPVDH 193 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~l--~~~~li~~nGa~I~~~~~~ 193 (406)
.++||+|+||||++ +...+++.++++|++|.+.+ .++|+|||++..+..++.. ...+++++||+.|+.+.+.
T Consensus 4 ~kli~~DlDGTLl~-----~~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~ 78 (273)
T PRK00192 4 KLLVFTDLDGTLLD-----HHTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNY 78 (273)
T ss_pred ceEEEEcCcccCcC-----CCCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccc
Confidence 67999999999998 34567889999999999985 8999999999998887742 1347999999999875432
Q ss_pred cccCCCCCCcccccccCCccccccccccccchHHHHHHHHHHHhh------------------hccCceee---ecceeE
Q 015439 194 TVSDDHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENTK------------------SIKGAKVE---NHKFCV 252 (406)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~~------------------~~~g~~vE---~~~~~l 252 (406)
.. ..... .....+..+....... +.+.++...+..... ..+...++ ......
T Consensus 79 ~~--~~~~~--~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (273)
T PRK00192 79 FP--FQPDG--ERLKGDYWVIELGPPY---EELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSE 151 (273)
T ss_pred cc--cCCcc--ccccCCceEEEcCCCH---HHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCC
Confidence 10 00000 0000000000000000 111222221111000 00000000 000000
Q ss_pred EEEeeecCCCCHHHHHHHHHHHHhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCC-CCCccEEEEeCCcCCH
Q 015439 253 SVHYRNVDEKSWPTIAQCVHDVLKDYPRLRLTHGRKVLEIRPVIDWNKGKAVEFLLESLGLSD-SDDVLPIYIGDDRTDE 331 (406)
Q Consensus 253 ~~h~r~~d~~~~~~l~~~l~~~l~~~p~l~v~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~-~~~~~viaiGD~~NDe 331 (406)
.+-. .+. .+..+.+...++.. ++.+.++..++||.|. + +||+|+++|++.+|++. + .+++|||+.||+
T Consensus 152 ~~~~--~~~---~~~~~~~~~~l~~~-~~~~~~~~~~~ei~~~-~-~Kg~al~~l~~~~~i~~~~---~v~~~GDs~NDi 220 (273)
T PRK00192 152 PFLW--NGS---EAAKERFEEALKRL-GLKVTRGGRFLHLLGG-G-DKGKAVRWLKELYRRQDGV---ETIALGDSPNDL 220 (273)
T ss_pred ceee--cCc---hHHHHHHHHHHHHc-CCEEEECCeEEEEeCC-C-CHHHHHHHHHHHHhccCCc---eEEEEcCChhhH
Confidence 0000 001 12334444445444 4676667789999999 9 99999999999999988 6 799999999999
Q ss_pred HHHHHHHhCCCceEEEecCCCCCc------cc-eEEe--C--CHHHHHHHHHHHHH
Q 015439 332 DAFKVLRKGNRGYGILVSSVPKET------KA-FYSL--R--DPSEVQEFLLSLVR 376 (406)
Q Consensus 332 dMf~~~~~~~~G~gVaVgna~~~t------~A-~y~l--~--~~~eV~~fL~~L~~ 376 (406)
+||+.+ |++|+|+||+++. .| ++++ . +.+||++.|++++.
T Consensus 221 ~m~~~a-----g~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~~~ 271 (273)
T PRK00192 221 PMLEAA-----DIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKLLS 271 (273)
T ss_pred HHHHhC-----CeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHHHh
Confidence 999997 8999999998652 33 4665 3 46799999998864
No 30
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.91 E-value=1.2e-23 Score=196.82 Aligned_cols=195 Identities=21% Similarity=0.246 Sum_probs=123.2
Q ss_pred EEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC---CcCceEEccCCceEeCCCCCc
Q 015439 119 AIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG---LTELYYAGSHGMDIMGPVDHT 194 (406)
Q Consensus 119 lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~---l~~~~li~~nGa~I~~~~~~~ 194 (406)
+||+|+||||++ ++...++.++++|++|.+.+ +|+|+|||++..+..++. +...++||+||+.|+.+....
T Consensus 1 ~i~~DlDGTLL~-----~~~~~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~ 75 (221)
T TIGR02463 1 WVFSDLDGTLLD-----SHSYDWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWR 75 (221)
T ss_pred CEEEeCCCCCcC-----CCCCCcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCcccc
Confidence 589999999998 34445666999999999985 899999999999988874 332689999999998754321
Q ss_pred ccCCCCCCcccccccCCccccccccccccchHHHHHHHHHHHhh----hc-----------cCce------eeecceeEE
Q 015439 195 VSDDHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENTK----SI-----------KGAK------VENHKFCVS 253 (406)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~~----~~-----------~g~~------vE~~~~~l~ 253 (406)
+...+... ..... . ..+.++++.+..... .. .+.. .+.......
T Consensus 76 ~~~~~~~~--~~~~~---------~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (221)
T TIGR02463 76 EEPGYPRI--ILGIS---------Y----GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVP 140 (221)
T ss_pred cCCCceEE--ecCCC---------H----HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcc
Confidence 00000000 00000 0 111122221111000 00 0000 000001111
Q ss_pred EEeeecCCCCHHHHHHHHHHHHhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHH
Q 015439 254 VHYRNVDEKSWPTIAQCVHDVLKDYPRLRLTHGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDA 333 (406)
Q Consensus 254 ~h~r~~d~~~~~~l~~~l~~~l~~~p~l~v~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedM 333 (406)
+... .+ ....+.+.+.+++. ++.++++..++||.|+ +++||.|++++++.+|++.+ ++++|||+.||++|
T Consensus 141 ~~~~-~~----~~~~~~~~~~l~~~-~~~~~~~~~~~ei~~~-~~~Kg~al~~l~~~lgi~~~---~vi~~GD~~NDi~m 210 (221)
T TIGR02463 141 LLWR-DS----DSRMPRFTALLADL-GLAIVQGNRFSHVLGA-SSSKGKAANWLKATYNQPDV---KTLGLGDGPNDLPL 210 (221)
T ss_pred EEec-Cc----hhHHHHHHHHHHHc-CCeEEecCCeeEEecC-CCCHHHHHHHHHHHhCCCCC---cEEEECCCHHHHHH
Confidence 1110 11 12333444555554 4777667789999999 99999999999999999876 79999999999999
Q ss_pred HHHHHhCCCceEEEe
Q 015439 334 FKVLRKGNRGYGILV 348 (406)
Q Consensus 334 f~~~~~~~~G~gVaV 348 (406)
|+.+ |+||||
T Consensus 211 l~~a-----g~~va~ 220 (221)
T TIGR02463 211 LEVA-----DYAVVI 220 (221)
T ss_pred HHhC-----CceEEe
Confidence 9996 899987
No 31
>PTZ00174 phosphomannomutase; Provisional
Probab=99.91 E-value=4.5e-23 Score=196.78 Aligned_cols=204 Identities=17% Similarity=0.225 Sum_probs=122.4
Q ss_pred ccCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhCCc---C-ceEEccCCceEe
Q 015439 114 KKKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVGLT---E-LYYAGSHGMDIM 188 (406)
Q Consensus 114 ~~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~l~---~-~~li~~nGa~I~ 188 (406)
.++.++|++|+||||++ ++..++++++++|+++.+.+ .|+|||||++..+.+.++.. . .++|++||+.|+
T Consensus 2 ~~~~klia~DlDGTLL~-----~~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~ 76 (247)
T PTZ00174 2 EMKKTILLFDVDGTLTK-----PRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAY 76 (247)
T ss_pred CCCCeEEEEECcCCCcC-----CCCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEE
Confidence 35689999999999998 66789999999999999995 89999999999999988632 2 368999999998
Q ss_pred CCCCCcccCCCCCCcccccccCCccccccccccccchHHHHHHHHHHH-----hhhccCceeeecceeEEEEe-eecCC-
Q 015439 189 GPVDHTVSDDHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVEN-----TKSIKGAKVENHKFCVSVHY-RNVDE- 261 (406)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~-----~~~~~g~~vE~~~~~l~~h~-r~~d~- 261 (406)
..+ ..+.. ..+.. .. . ...+.++.+.+... .....+.+.+.........+ .....
T Consensus 77 ~~~-~~i~~---~~i~~-~l----------~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (247)
T PTZ00174 77 KDG-ELFHS---QSILK-FL----------G---EEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQ 138 (247)
T ss_pred ECC-eEEEE---Ecchh-cC----------C---HHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCH
Confidence 633 22110 00000 00 0 01223333332211 00111222222110011111 00000
Q ss_pred ----C----CH-HHHHHHHHHHH-hhCCCeE--EEe-cCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeC--
Q 015439 262 ----K----SW-PTIAQCVHDVL-KDYPRLR--LTH-GRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGD-- 326 (406)
Q Consensus 262 ----~----~~-~~l~~~l~~~l-~~~p~l~--v~~-g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD-- 326 (406)
. .. ....+.+.+.+ +.++++. ..+ +..++||.|+ |+|||.||++|++++ + ++++|||
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~~leI~~~-gvsKg~al~~L~~~~----~---eviafGD~~ 210 (247)
T PTZ00174 139 EERDEFEKYDKEHHIREKFIQDLKKEFSDLGLKFSIGGQISFDVFPK-GWDKTYCLRHLENDF----K---EIHFFGDKT 210 (247)
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHhcCCCCeEEEecCceEEEeeeC-CCcHHHHHHHHHhhh----h---hEEEEcccC
Confidence 0 00 01112222222 3344433 333 3579999999 999999999999992 2 7999999
Q ss_pred --CcCCHHHHHHHHhCCCceEEEecCCC
Q 015439 327 --DRTDEDAFKVLRKGNRGYGILVSSVP 352 (406)
Q Consensus 327 --~~NDedMf~~~~~~~~G~gVaVgna~ 352 (406)
+.||++||+.++. .|+ +|+|++
T Consensus 211 ~~~~NDieMl~~~~~--~g~--~v~n~~ 234 (247)
T PTZ00174 211 FEGGNDYEIYNDPRT--IGH--SVKNPE 234 (247)
T ss_pred CCCCCcHhhhhcCCC--ceE--EeCCHH
Confidence 8999999998532 244 454654
No 32
>PLN02382 probable sucrose-phosphatase
Probab=99.90 E-value=3.2e-23 Score=211.28 Aligned_cols=238 Identities=19% Similarity=0.153 Sum_probs=149.0
Q ss_pred ccCCEEEEEecCCccCCCCCCCCccCCChhHHHHH-HHHHhcC-CEEEEcCCChhhHHHHh---CC-cCceEEccCCceE
Q 015439 114 KKKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAV-RNVAKYF-PTAIITGRSRDKVYELV---GL-TELYYAGSHGMDI 187 (406)
Q Consensus 114 ~~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL-~~L~~~~-~v~I~SGR~~~~l~~~~---~l-~~~~li~~nGa~I 187 (406)
.+.+.+|++|+||||++.. +...++.....++ +++.+++ .++++|||+...+.++. ++ .+.++|++||+.|
T Consensus 6 ~~~~~lI~sDLDGTLL~~~---~~~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I 82 (413)
T PLN02382 6 GSPRLMIVSDLDHTMVDHH---DPENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEI 82 (413)
T ss_pred CCCCEEEEEcCCCcCcCCC---CccchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEE
Confidence 4567899999999999842 1336776666666 8877775 89999999977776664 33 3456899999999
Q ss_pred eCCCCCcccCCCCCCcccccccCCccccccccccccchHHHHHHHHHHHhhhccCceeeecceeEEEEeeecCCCCHHHH
Q 015439 188 MGPVDHTVSDDHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENTKSIKGAKVENHKFCVSVHYRNVDEKSWPTI 267 (406)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~~~~~g~~vE~~~~~l~~h~r~~d~~~~~~l 267 (406)
+..........|... ....|.. ..+.+.+..+-........+.....+.++.. .+....+
T Consensus 83 ~~~~~~~~d~~w~~~---------------l~~~w~~--~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~---~~~~~~~ 142 (413)
T PLN02382 83 AYGESMVPDHGWVEY---------------LNKKWDR--EIVVEETSKFPELKLQPETEQRPHKVSFYVD---KKKAQEV 142 (413)
T ss_pred EeCCCCccChhHHHH---------------HhccCCh--hhHHHHHhcCCCcccCCcccCCCeEEEEEec---hHHhHHH
Confidence 864422111111100 0011211 1122221111000111222333344445433 2122233
Q ss_pred HHHHHHHHhhCC-CeEE-EecCeEEEEEcCCCCCHHHHHHHHHHHc---CCCCCCCccEEEEeCCcCCHHHHHHHHhCCC
Q 015439 268 AQCVHDVLKDYP-RLRL-THGRKVLEIRPVIDWNKGKAVEFLLESL---GLSDSDDVLPIYIGDDRTDEDAFKVLRKGNR 342 (406)
Q Consensus 268 ~~~l~~~l~~~p-~l~v-~~g~~~lEI~P~~gvsKG~Al~~Ll~~l---g~~~~~~~~viaiGD~~NDedMf~~~~~~~~ 342 (406)
.+.+.+.+.... .+.+ .++..++||.|+ ++|||.||++|++++ |++.+ .+++|||+.||++||+.+
T Consensus 143 ~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~-g~sKg~Al~~L~~~~~~~gi~~~---~~iafGDs~NDleMl~~a----- 213 (413)
T PLN02382 143 IKELSERLEKRGLDVKIIYSGGIDLDVLPQ-GAGKGQALAYLLKKLKAEGKAPV---NTLVCGDSGNDAELFSVP----- 213 (413)
T ss_pred HHHHHHHHHhcCCcEEEEEECCcEEEEEeC-CCCHHHHHHHHHHHhhhcCCChh---cEEEEeCCHHHHHHHhcC-----
Confidence 444444444321 3443 577789999999 999999999999999 88775 799999999999999996
Q ss_pred c-eEEEecCCCCCc----------cceEEeC---CHHHHHHHHHHHHHhhhhhHh
Q 015439 343 G-YGILVSSVPKET----------KAFYSLR---DPSEVQEFLLSLVRWKKLEKE 383 (406)
Q Consensus 343 G-~gVaVgna~~~t----------~A~y~l~---~~~eV~~fL~~L~~~~~~~~~ 383 (406)
| +||+|+||.++- .|++++. +.+|+.+.|+++.-....+.+
T Consensus 214 g~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~f~l~~~~~~~ 268 (413)
T PLN02382 214 DVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGHFNLGPNVSPR 268 (413)
T ss_pred CCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHHhCCCCCCChh
Confidence 7 899999998542 2345532 568899999888755444433
No 33
>PLN02423 phosphomannomutase
Probab=99.90 E-value=3.8e-22 Score=190.26 Aligned_cols=211 Identities=20% Similarity=0.329 Sum_probs=132.5
Q ss_pred ccCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcCCEEEEcCCChhhHHHHhCCc---C-ceEEccCCceEeC
Q 015439 114 KKKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYFPTAIITGRSRDKVYELVGLT---E-LYYAGSHGMDIMG 189 (406)
Q Consensus 114 ~~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~l~---~-~~li~~nGa~I~~ 189 (406)
+..++++|+|+||||++ ++..++++++++|++|+++..|+|+|||++..+...++.. . .++|++||+.+..
T Consensus 4 ~~~~~i~~~D~DGTLl~-----~~~~i~~~~~~ai~~l~~~i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~ 78 (245)
T PLN02423 4 RKPGVIALFDVDGTLTA-----PRKEATPEMLEFMKELRKVVTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHK 78 (245)
T ss_pred CccceEEEEeccCCCcC-----CCCcCCHHHHHHHHHHHhCCEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEe
Confidence 34456777999999998 5678999999999999988889999999999998887642 1 4799999999985
Q ss_pred CCCCcccCCCCCCcccccccCCcccccccccccc--chHHHHHHHHHHHh-----hhccCceeeecceeEEEE--eeecC
Q 015439 190 PVDHTVSDDHPNSIKSTDQQGKEVNLFQPAREFL--PMIDEVFRTLVENT-----KSIKGAKVENHKFCVSVH--YRNVD 260 (406)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~--~~i~~v~~~l~~~~-----~~~~g~~vE~~~~~l~~h--~r~~d 260 (406)
.+ ..+.... . ..++ ..+.++.+.+.... ....+.+++.....+.+. +..+.
T Consensus 79 ~g-~~i~~~~---l----------------~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~ 138 (245)
T PLN02423 79 DG-KLIGTQS---L----------------KSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCS 138 (245)
T ss_pred CC-EEEEEec---c----------------cccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCC
Confidence 43 2211000 0 0000 22333333332211 112234444332222111 11111
Q ss_pred CC------CH----HHHHHHHHHHHhhCCCeEE--E-ecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeC-
Q 015439 261 EK------SW----PTIAQCVHDVLKDYPRLRL--T-HGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGD- 326 (406)
Q Consensus 261 ~~------~~----~~l~~~l~~~l~~~p~l~v--~-~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD- 326 (406)
.. .+ ....+....+.++++++.+ + +|..++||.|+ |+|||.||+.|+ +.+ ++++|||
T Consensus 139 ~~~~~~~~~i~~i~~~~~~~~~~l~~~~~~~~~~~s~~g~~~iDi~~~-gvnKg~al~~L~-----~~~---e~~aFGD~ 209 (245)
T PLN02423 139 QEERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTYSIGGQISFDVFPQ-GWDKTYCLQFLE-----DFD---EIHFFGDK 209 (245)
T ss_pred HhHHhhHHhhCccchHHHHHHHHHHHhCCCCcEEEecCCcEEEEEeeC-CCCHHHHHHHhc-----CcC---eEEEEecc
Confidence 11 01 1112222333455665444 3 45589999999 999999999999 443 7999999
Q ss_pred ---CcCCHHHHHHHHhCCCceEEEecCCCCCccceEEeCCHHHHHHHHHHHH
Q 015439 327 ---DRTDEDAFKVLRKGNRGYGILVSSVPKETKAFYSLRDPSEVQEFLLSLV 375 (406)
Q Consensus 327 ---~~NDedMf~~~~~~~~G~gVaVgna~~~t~A~y~l~~~~eV~~fL~~L~ 375 (406)
+.||++||+.- +-.+++ +.+|+++.+.|+.|+
T Consensus 210 ~~~~~ND~eMl~~~----~~~~~~-------------~~~~~~~~~~~~~~~ 244 (245)
T PLN02423 210 TYEGGNDHEIFESE----RTIGHT-------------VTSPDDTREQCTALF 244 (245)
T ss_pred CCCCCCcHHHHhCC----CcceEE-------------eCCHHHHHHHHHHhc
Confidence 89999999972 123444 457888888887764
No 34
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.88 E-value=1e-22 Score=194.40 Aligned_cols=204 Identities=21% Similarity=0.241 Sum_probs=123.4
Q ss_pred CEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhc-CCEEEEcCCChhhHHHHhC---C-cCceEEccCCceEeCCC
Q 015439 117 KIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKY-FPTAIITGRSRDKVYELVG---L-TELYYAGSHGMDIMGPV 191 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~-~~v~I~SGR~~~~l~~~~~---l-~~~~li~~nGa~I~~~~ 191 (406)
+++|++|+||||++ .......++.+.++...+. ..++++|||+...+.+++. + .+.++|+++|+.|+...
T Consensus 2 ~~ll~sDlD~Tl~~-----~~~~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~ 76 (247)
T PF05116_consen 2 PRLLASDLDGTLID-----GDDEALARLEELLEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGE 76 (247)
T ss_dssp SEEEEEETBTTTBH-----CHHHHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESS
T ss_pred CEEEEEECCCCCcC-----CCHHHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcC
Confidence 68999999999992 1222234444444411122 4799999999999998874 3 35789999999999843
Q ss_pred CCcccCCCCCCcccccccCCccccccccccccchHHHHHHHHHHHhhhccCceeeecceeEEEEeeecCCCCHHHHHHHH
Q 015439 192 DHTVSDDHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENTKSIKGAKVENHKFCVSVHYRNVDEKSWPTIAQCV 271 (406)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~~~~~g~~vE~~~~~l~~h~r~~d~~~~~~l~~~l 271 (406)
.......|... ....|.. +.+.+.+..+..-.+....+.+.+.+++.++... .....+.+
T Consensus 77 ~~~~d~~w~~~---------------i~~~w~~--~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~---~~~~~~~i 136 (247)
T PF05116_consen 77 NWQPDEEWQAH---------------IDERWDR--ERVEEILAELPGLRPQPESEQRPFKISYYVDPDD---SADILEEI 136 (247)
T ss_dssp TTEE-HHHHHH---------------HHTT--H--HHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTS---HCHHHHHH
T ss_pred CCcChHHHHHH---------------HHhcCCh--HHHHHHHHHhhCcccCCccccCCeeEEEEEeccc---chhHHHHH
Confidence 22111112110 0111211 3333333222111112222334556666655322 23445667
Q ss_pred HHHHhhCC-CeEE-EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEec
Q 015439 272 HDVLKDYP-RLRL-THGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVS 349 (406)
Q Consensus 272 ~~~l~~~p-~l~v-~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVg 349 (406)
++.++... .+.+ .++...++|.|. +++||.||++|+++++++.+ .++++|||.||++||... ..||+|+
T Consensus 137 ~~~l~~~~l~~~~i~s~~~~ldilP~-~a~K~~Al~~L~~~~~~~~~---~vl~aGDSgND~~mL~~~-----~~~vvV~ 207 (247)
T PF05116_consen 137 RARLRQRGLRVNVIYSNGRDLDILPK-GASKGAALRYLMERWGIPPE---QVLVAGDSGNDLEMLEGG-----DHGVVVG 207 (247)
T ss_dssp HHHHHCCTCEEEEEECTCCEEEEEET-T-SHHHHHHHHHHHHT--GG---GEEEEESSGGGHHHHCCS-----SEEEE-T
T ss_pred HHHHHHcCCCeeEEEccceeEEEccC-CCCHHHHHHHHHHHhCCCHH---HEEEEeCCCCcHHHHcCc-----CCEEEEc
Confidence 77776553 2333 457788999999 99999999999999999875 799999999999999663 6899999
Q ss_pred CCCCC
Q 015439 350 SVPKE 354 (406)
Q Consensus 350 na~~~ 354 (406)
|+.++
T Consensus 208 Na~~e 212 (247)
T PF05116_consen 208 NAQPE 212 (247)
T ss_dssp TS-HH
T ss_pred CCCHH
Confidence 98765
No 35
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.86 E-value=1.2e-20 Score=198.51 Aligned_cols=211 Identities=17% Similarity=0.165 Sum_probs=130.9
Q ss_pred ccCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC-C-cCceEEccCCceEeCC
Q 015439 114 KKKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG-L-TELYYAGSHGMDIMGP 190 (406)
Q Consensus 114 ~~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~-l-~~~~li~~nGa~I~~~ 190 (406)
-.++++||+|+||||++ .+..+++.++++|++|++++ +|+|||||++..+..++. + ...++|++||+.|+.+
T Consensus 413 ~~~~KLIfsDLDGTLLd-----~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~ 487 (694)
T PRK14502 413 GQFKKIVYTDLDGTLLN-----PLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIP 487 (694)
T ss_pred CceeeEEEEECcCCCcC-----CCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEEC
Confidence 34578999999999998 34567788999999999985 899999999999888764 2 2358999999999987
Q ss_pred CCCcccCCCCCCcccccccCCccccccccccccchHHHHHHHHHHHhh-------hccCceeeec---------------
Q 015439 191 VDHTVSDDHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENTK-------SIKGAKVENH--------------- 248 (406)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~~-------~~~g~~vE~~--------------- 248 (406)
.+... .+..... ..+.. .++...-. .+.+.++.+.+..... ...+.++...
T Consensus 488 ~~~~~--~~~~~~~---~~~~~-iI~~~~l~-~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~TgL~ 560 (694)
T PRK14502 488 KDYFR--LPFAYDR---VAGNY-LVIELGMA-YKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRLTDLN 560 (694)
T ss_pred CCccc--ccccccc---cCCCe-EEEEcCCC-HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHhhCCC
Confidence 64210 0000000 00000 01100000 0122233332221000 0000011000
Q ss_pred ----------ceeEEEEeeecCCCCHHHHHHHHHHHHhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCC
Q 015439 249 ----------KFCVSVHYRNVDEKSWPTIAQCVHDVLKDYPRLRLTHGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDD 318 (406)
Q Consensus 249 ----------~~~l~~h~r~~d~~~~~~l~~~l~~~l~~~p~l~v~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~ 318 (406)
.+...+.+. ++ .+..+.+.+.+++. ++.+..|+.++||. . ++|||+||++|++.+|++.+
T Consensus 561 ~~~a~~a~~Re~seKIl~~--gd---~e~Leel~~~L~~~-~l~v~~g~rfleI~-~-gvdKG~AL~~L~e~~gI~~~-- 630 (694)
T PRK14502 561 LKQAELAKQREYSETVHIE--GD---KRSTNIVLNHIQQS-GLEYSFGGRFYEVT-G-GNDKGKAIKILNELFRLNFG-- 630 (694)
T ss_pred HHHHHHHhhccCceeEEEc--CC---HHHHHHHHHHHHHc-CcEEEECCEEEEeC-C-CCCHHHHHHHHHHHhCCCcc--
Confidence 000000000 00 23344455555554 57777799999998 7 99999999999999998864
Q ss_pred ccEEEE--eCCcCCHHHHHHHHhCCCceEEEecCCC
Q 015439 319 VLPIYI--GDDRTDEDAFKVLRKGNRGYGILVSSVP 352 (406)
Q Consensus 319 ~~viai--GD~~NDedMf~~~~~~~~G~gVaVgna~ 352 (406)
.+++| ||+.||++||+++ |+||+|++..
T Consensus 631 -eViafalGDs~NDisMLe~A-----g~gVAM~~~~ 660 (694)
T PRK14502 631 -NIHTFGLGDSENDYSMLETV-----DSPILVQRPG 660 (694)
T ss_pred -ceEEEEcCCcHhhHHHHHhC-----CceEEEcCCC
Confidence 56666 9999999999997 8999998754
No 36
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.85 E-value=1.2e-20 Score=177.78 Aligned_cols=203 Identities=19% Similarity=0.271 Sum_probs=117.7
Q ss_pred EEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhCCc--CceEEccCCceEeCCCCCcc
Q 015439 119 AIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVGLT--ELYYAGSHGMDIMGPVDHTV 195 (406)
Q Consensus 119 lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~l~--~~~li~~nGa~I~~~~~~~~ 195 (406)
+||+|+||||+. ++ .++++++++|++|++.+ +++++|||++..+..++... ..++|++||+.|+.+....
T Consensus 1 li~~DlDGTLl~-----~~-~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~- 73 (225)
T TIGR02461 1 VIFTDLDGTLLP-----PG-YEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYF- 73 (225)
T ss_pred CEEEeCCCCCcC-----CC-CCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccc-
Confidence 589999999998 22 35668999999999985 89999999999988876421 2379999999999865321
Q ss_pred cCCCCCCcccccccCCccccccccccccchHHHHHHHHHHHh--hhccCceee-----------------ecceeEEEEe
Q 015439 196 SDDHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENT--KSIKGAKVE-----------------NHKFCVSVHY 256 (406)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~--~~~~g~~vE-----------------~~~~~l~~h~ 256 (406)
.+..... ...+... ++...-. .+.+.++.+.+.+.. ....+.... ...+.-.+ +
T Consensus 74 --~~~~~~~--~~~~~~~-i~~~~l~-~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~-~ 146 (225)
T TIGR02461 74 --PFPVGAG--REVGNYE-VIELGKP-VAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETI-F 146 (225)
T ss_pred --ccccccc--ccCCCeE-EEEcCCC-HHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcc-c
Confidence 0000000 0000000 0000000 012223332222100 000000000 00000000 0
Q ss_pred eecCCCCHHHHHHHHHHHHhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHH
Q 015439 257 RNVDEKSWPTIAQCVHDVLKDYPRLRLTHGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKV 336 (406)
Q Consensus 257 r~~d~~~~~~l~~~l~~~l~~~p~l~v~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~ 336 (406)
.. + .+....+.+.++. .++.+.++..+++| +. ++|||.|+++|++.+++... ...+++|||+.||++||+.
T Consensus 147 ~~-~----~e~~~~~~~~~~~-~~~~~~~s~~~~~i-~~-~~sK~~al~~l~~~~~~~~~-~~~~i~~GD~~nD~~ml~~ 217 (225)
T TIGR02461 147 LW-S----REGWEAILVTARA-RGLKYTHGGRFYTV-HG-GSDKGKAIKRLLDLYKLRPG-AIESVGLGDSENDFPMFEV 217 (225)
T ss_pred CC-C----HHHHHHHHHHHHH-cCCcEEECCEEEEE-CC-CCCHHHHHHHHHHHhccccC-cccEEEEcCCHHHHHHHHh
Confidence 00 1 1122222222333 35777777777875 78 99999999999999977431 1379999999999999999
Q ss_pred HHhCCCceEEEec
Q 015439 337 LRKGNRGYGILVS 349 (406)
Q Consensus 337 ~~~~~~G~gVaVg 349 (406)
+ |+||+||
T Consensus 218 a-----g~~v~v~ 225 (225)
T TIGR02461 218 V-----DLAFLVG 225 (225)
T ss_pred C-----CCcEecC
Confidence 7 8999986
No 37
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.82 E-value=1.8e-19 Score=173.03 Aligned_cols=207 Identities=15% Similarity=0.149 Sum_probs=128.1
Q ss_pred CEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhc-CCEEEEcCCChhhHHHHhC-C-cCceEEccCCceEeCCCCC
Q 015439 117 KIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKY-FPTAIITGRSRDKVYELVG-L-TELYYAGSHGMDIMGPVDH 193 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~-~~v~I~SGR~~~~l~~~~~-l-~~~~li~~nGa~I~~~~~~ 193 (406)
.++||+|+||||++ ....+++.++++|++|+++ .+|+++|||++..+..++. + ...++|++||+.|+.+...
T Consensus 1 ~KLIftDLDGTLLd-----~~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~~~ 75 (302)
T PRK12702 1 MRLVLSSLDGSLLD-----LEFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPEHY 75 (302)
T ss_pred CcEEEEeCCCCCcC-----CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEcccc
Confidence 36899999999998 3456788999999999998 4999999999999888764 2 1348999999999988653
Q ss_pred cc----cCCCCCCcccccccCCccccc-cccccccchHHHHHHHHH-------HH----hhhccCceee------eccee
Q 015439 194 TV----SDDHPNSIKSTDQQGKEVNLF-QPAREFLPMIDEVFRTLV-------EN----TKSIKGAKVE------NHKFC 251 (406)
Q Consensus 194 ~~----~~~~~~~~~~~~~~~~~~~l~-~~a~~~~~~i~~v~~~l~-------~~----~~~~~g~~vE------~~~~~ 251 (406)
.. ...+. ...+-.+..+ .+-..+...++++...+. +. +....|.-.+ .++++
T Consensus 76 ~~~~~~~~~~~------~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~S 149 (302)
T PRK12702 76 FPAGILDEQWQ------HRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYS 149 (302)
T ss_pred ccccccccccc------cCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCC
Confidence 20 00000 0000000001 111112222222222210 00 0111121111 12233
Q ss_pred EEEEeeecCCCCHHHHHHHHHHHHhhCCCeEEEecCeEEEEEc---------------------CCCCCHHHHHHHHHHH
Q 015439 252 VSVHYRNVDEKSWPTIAQCVHDVLKDYPRLRLTHGRKVLEIRP---------------------VIDWNKGKAVEFLLES 310 (406)
Q Consensus 252 l~~h~r~~d~~~~~~l~~~l~~~l~~~p~l~v~~g~~~lEI~P---------------------~~gvsKG~Al~~Ll~~ 310 (406)
-.+.+...+ +...+.+++. ++.+++|..++.+.. . +.+||.|+++|.+.
T Consensus 150 Ep~~w~~~~--------~~~~~~~~~~-g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~-~~dKg~A~~~L~~~ 219 (302)
T PRK12702 150 EIFSYSGDP--------ARLREAFAQQ-EANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPN-SLPGEQAVQLLLDC 219 (302)
T ss_pred cceEecCCH--------HHHHHHHHHc-CCeEEecCceEEecccccccccccccccccccccccC-CCCHHHHHHHHHHH
Confidence 333332211 1114455555 588888887777764 4 67999999999999
Q ss_pred cCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecC
Q 015439 311 LGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSS 350 (406)
Q Consensus 311 lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgn 350 (406)
+.-.. ....++++|||.||++|++++ .++|.|-+
T Consensus 220 y~~~~-~~~~tiaLGDspND~~mLe~~-----D~~vvi~~ 253 (302)
T PRK12702 220 YQRHL-GPIKALGIGCSPPDLAFLRWS-----EQKVVLPS 253 (302)
T ss_pred HHhcc-CCceEEEecCChhhHHHHHhC-----CeeEEecC
Confidence 87542 235899999999999999998 58999854
No 38
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=99.79 E-value=1.2e-23 Score=224.36 Aligned_cols=388 Identities=28% Similarity=0.263 Sum_probs=281.4
Q ss_pred CCCCCCCCCcccCCcccccccccccCC--CccCCCC-CCCC---CceeecCCCCCCCcchhhhccHHHHHhcCCchhhhh
Q 015439 2 ELKSNQASPVLTDPASLNKSKLGIHSR--LPYSQPG-ASFS---GKCIAIPRKKPGKLDDVRSNGWLDAMKSSSPPRKKL 75 (406)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~-~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (406)
.+...+..||++|+..-.+.-.|-..+ .|+.... +... +......|+..-......+..|++.|. ++|+.-
T Consensus 69 ~~~~~~~~pv~~~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~~~~~~~w~~y~~~n~~f~d~ive~~~-~~d~vw-- 145 (732)
T KOG1050|consen 69 LLEEFDSVPVFLDDELFDSYYNGYCKSILWPLFHYMLIPSEPAFKLFDLELWKAYVKVNQAFADKIVEVYE-EGDIVW-- 145 (732)
T ss_pred hhhhcCceeeecCCchhhhhhhhhhhhcccceeecccCCCchhhhhhHHHHHHHHHHHhHHHHHHHHHhcc-CCCcEE--
Confidence 345567899999974433333333222 4433333 3221 222234444423344667788999999 777754
Q ss_pred ccccCCCC-CcccchhhhhhHH-hhCCccchhHHHHHHHhccCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHh
Q 015439 76 IKDFNADV-GLDDFDIAYCSWM-LKYPSALKYFEKIMSEAKKKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAK 153 (406)
Q Consensus 76 ~~~~~~~~-~~~~~~~~~~~w~-~~~p~~L~~f~~i~~~~~~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~ 153 (406)
.|+++--+ ...+.....++|+ -.+|+++.+||.+......+++|.++|+||||-++..++++++++-.++.+..+.++
T Consensus 146 ihdyhlmllp~~lr~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s 225 (732)
T KOG1050|consen 146 IHDYHLMLLPQMLRERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVAS 225 (732)
T ss_pred EEcchhhccchhhhcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhc
Confidence 45433111 2233445589999 789999999999999999999999999999999999999999999999999999999
Q ss_pred cCCEEEEcCCChhh----------HHHHhCCcCceEEccCCceEeCCCC-CcccCCCCCCcccccccCCccccccccccc
Q 015439 154 YFPTAIITGRSRDK----------VYELVGLTELYYAGSHGMDIMGPVD-HTVSDDHPNSIKSTDQQGKEVNLFQPAREF 222 (406)
Q Consensus 154 ~~~v~I~SGR~~~~----------l~~~~~l~~~~li~~nGa~I~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~ 222 (406)
+++.++++||++.. +.+++++.++++++++|+.|..+.+ ..+.-....+....+...+...++++..++
T Consensus 226 ~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~ 305 (732)
T KOG1050|consen 226 KFPTAGVSGRGRDVSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEY 305 (732)
T ss_pred cCCcceEEeccceeeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhC
Confidence 99999999999988 8888888899999999999998762 211111111111111111112233334444
Q ss_pred cchHHHHHHHHHHHhhhccCceeeecceeEEEEeeecCCCCHHHHHHHHHHHHhhCCCeEEEecCeEEEEEcCCCCCHHH
Q 015439 223 LPMIDEVFRTLVENTKSIKGAKVENHKFCVSVHYRNVDEKSWPTIAQCVHDVLKDYPRLRLTHGRKVLEIRPVIDWNKGK 302 (406)
Q Consensus 223 ~~~i~~v~~~l~~~~~~~~g~~vE~~~~~l~~h~r~~d~~~~~~l~~~l~~~l~~~p~l~v~~g~~~lEI~P~~gvsKG~ 302 (406)
.++++++.........++++..+++.++|++.||+++++++|....+.+..+...+|..+.+.+..+.|++|.+.|.||.
T Consensus 306 pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGm 385 (732)
T KOG1050|consen 306 PEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGM 385 (732)
T ss_pred hhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeeccccccc
Confidence 44444443222222345666667888899999999999988876556666666777777888999999999999999999
Q ss_pred HHHHHHHHcCCCC--CCCccEEEEeCCcCCHHHHHHHHhC-CCceEEEecCCCCCccceEEeCCHHHHHH-HHHHHHHhh
Q 015439 303 AVEFLLESLGLSD--SDDVLPIYIGDDRTDEDAFKVLRKG-NRGYGILVSSVPKETKAFYSLRDPSEVQE-FLLSLVRWK 378 (406)
Q Consensus 303 Al~~Ll~~lg~~~--~~~~~viaiGD~~NDedMf~~~~~~-~~G~gVaVgna~~~t~A~y~l~~~~eV~~-fL~~L~~~~ 378 (406)
++..+...++... ..+....++||+.+|++.+..++.- ..+++++|+.+.+.+.+.+.++++..+.. +...+..|.
T Consensus 386 nl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~ 465 (732)
T KOG1050|consen 386 NLVFLEYILCQENKKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWA 465 (732)
T ss_pred chhhhHHHHhhcccCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHH
Confidence 9999999998876 6778999999999999999998765 45789999999888999999999999888 889999998
Q ss_pred hhhHh-hhhcccccc
Q 015439 379 KLEKE-FESATSSLF 392 (406)
Q Consensus 379 ~~~~~-~~~~~~~~~ 392 (406)
+.+.+ ....|+.=+
T Consensus 466 ~~~~~~l~~~~~~~~ 480 (732)
T KOG1050|consen 466 KSFLQGLKRIWKVGF 480 (732)
T ss_pred HHHHHhhhhhhhhcc
Confidence 88755 444454443
No 39
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.58 E-value=3.8e-14 Score=129.26 Aligned_cols=210 Identities=21% Similarity=0.328 Sum_probs=125.6
Q ss_pred CCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhc-CCEEEEcCCChhhHHHH---hCCcCceEEccCCceEeCCC
Q 015439 116 KKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKY-FPTAIITGRSRDKVYEL---VGLTELYYAGSHGMDIMGPV 191 (406)
Q Consensus 116 k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~-~~v~I~SGR~~~~l~~~---~~l~~~~li~~nGa~I~~~~ 191 (406)
...+||+|+||||+++.-+|. .....+.+|.+. ++|++||..++..+..+ +++++.++|++||+.|+.|.
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~~------pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~ 79 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEWQ------PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPK 79 (274)
T ss_pred cceEEEEcccCcccCCCCCCC------ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEecc
Confidence 357999999999999655442 345678888887 59999999999887665 56778899999999999987
Q ss_pred CCcccCCCCCCcccccccCCccccccccccccchHHHHHHHHHHHhh-------------hccCceee------ecceeE
Q 015439 192 DHTVSDDHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENTK-------------SIKGAKVE------NHKFCV 252 (406)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~~-------------~~~g~~vE------~~~~~l 252 (406)
+.......++.+ .|.. ... ...-+..+++..+.+++... .+.|.--| .++++.
T Consensus 80 ~~~~~~~~~r~~-----~g~~--~~e-lg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyse 151 (274)
T COG3769 80 GWFPFDGKPREI-----SGIS--HIE-LGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSE 151 (274)
T ss_pred cccccCCCCcee-----cceE--eee-hhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhh
Confidence 653111111110 0100 000 00001223333333322110 00010000 011111
Q ss_pred EEEeeecCCCCHHHHHHHHHHHHhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHH
Q 015439 253 SVHYRNVDEKSWPTIAQCVHDVLKDYPRLRLTHGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDED 332 (406)
Q Consensus 253 ~~h~r~~d~~~~~~l~~~l~~~l~~~p~l~v~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDed 332 (406)
++..|..+ ....+....|... ++++++|..+..|.-. .-.||.|+.+|++.+-.-..- ..+++.||+.||.+
T Consensus 152 ti~~rs~d-----~~~~~~~~~L~e~-glt~v~garf~~v~~a-s~gKg~Aa~~ll~~y~rl~~~-r~t~~~GDg~nD~P 223 (274)
T COG3769 152 TIIWRSSD-----ERMAQFTARLNER-GLTFVHGARFWHVLDA-SAGKGQAANWLLETYRRLGGA-RTTLGLGDGPNDAP 223 (274)
T ss_pred heeecccc-----hHHHHHHHHHHhc-CceEEeccceEEEecc-ccCccHHHHHHHHHHHhcCce-eEEEecCCCCCccc
Confidence 22222111 1222333344443 6899998888888766 667999999999966432221 25999999999999
Q ss_pred HHHHHHhCCCceEEEecCCC
Q 015439 333 AFKVLRKGNRGYGILVSSVP 352 (406)
Q Consensus 333 Mf~~~~~~~~G~gVaVgna~ 352 (406)
||++. .+++.|++-.
T Consensus 224 l~ev~-----d~AfiV~~ln 238 (274)
T COG3769 224 LLEVM-----DYAFIVKGLN 238 (274)
T ss_pred HHHhh-----hhheeecccc
Confidence 99998 5899998643
No 40
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=99.39 E-value=6e-12 Score=113.21 Aligned_cols=222 Identities=18% Similarity=0.272 Sum_probs=141.1
Q ss_pred HHhccCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcCCEEEEcCCChhhHHHHhCC----cCceEEccCCce
Q 015439 111 SEAKKKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYFPTAIITGRSRDKVYELVGL----TELYYAGSHGMD 186 (406)
Q Consensus 111 ~~~~~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~l----~~~~li~~nGa~ 186 (406)
++++..+.|+.+|.||||++ .+..+++++.+.|++|++...+.++-|..+.++.+.+|. .-.|...+||..
T Consensus 5 a~~r~~~~l~lfdvdgtLt~-----~r~~~~~e~~~~l~~lr~~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~ 79 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTP-----PRQKVTPEMLEFLQKLRKKVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLV 79 (252)
T ss_pred hhhcCCceEEEEecCCcccc-----ccccCCHHHHHHHHHHhhheEEEEeecHHHHHHHHHhchhHHhhhcccccCCCee
Confidence 35566778999999999999 578899999999999999899999999999999999863 235888999997
Q ss_pred EeCCCCCcccCCCCCCcccccccCCccccccccccccchHHHHHHHHHHH-hhhccCceeeecceeEEEEe--eecCCCC
Q 015439 187 IMGPVDHTVSDDHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVEN-TKSIKGAKVENHKFCVSVHY--RNVDEKS 263 (406)
Q Consensus 187 I~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~-~~~~~g~~vE~~~~~l~~h~--r~~d~~~ 263 (406)
-+..+...-. .+. .+.-| .+.+.+.++-+++++.+. +-.-.|.++|.+.-.+.+.. |++..+.
T Consensus 80 ~yk~gk~~~~---Qsi---~~~LG--------ee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EE 145 (252)
T KOG3189|consen 80 AYKGGKLLSK---QSI---INHLG--------EEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEE 145 (252)
T ss_pred EeeCCcchhH---HHH---HHHHh--------HHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHH
Confidence 7665433200 000 00000 111123344455555432 11124788887665554442 4443221
Q ss_pred ---------HHHHHHHH-HHHHhhCC--CeEEE-ecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeC----
Q 015439 264 ---------WPTIAQCV-HDVLKDYP--RLRLT-HGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGD---- 326 (406)
Q Consensus 264 ---------~~~l~~~l-~~~l~~~p--~l~v~-~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD---- 326 (406)
.+.+.+.+ +++-++++ ++.+. .|.-++||-|. ||+|...|++|-.. |++ .+-+|||
T Consensus 146 R~eF~e~Dkk~~iR~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~-GWDKtyCLqhle~d-gf~-----~IhFFGDkT~~ 218 (252)
T KOG3189|consen 146 RNEFEELDKKHKIREKFVEALREEFADYGLTFSIGGQISFDVFPK-GWDKTYCLQHLEKD-GFD-----TIHFFGDKTMP 218 (252)
T ss_pred HHHHHHhhhhhhhHHHHHHHHHHHhcccCeeEEECCeEEEeecCC-CcchhHHHHHhhhc-CCc-----eEEEeccccCC
Confidence 01222222 22223343 46664 46789999999 99999999998765 554 6999999
Q ss_pred CcCCHHHHHHHHhCCCceEEEecCCCCCccceEEeCCHHHHHHHHHHHH
Q 015439 327 DRTDEDAFKVLRKGNRGYGILVSSVPKETKAFYSLRDPSEVQEFLLSLV 375 (406)
Q Consensus 327 ~~NDedMf~~~~~~~~G~gVaVgna~~~t~A~y~l~~~~eV~~fL~~L~ 375 (406)
+.||-+.|.-=+ | -.+++.+|++..+-++.++
T Consensus 219 GGNDyEIf~dpr----------------t-iGhsV~~PdDT~~~~~~if 250 (252)
T KOG3189|consen 219 GGNDYEIFADPR----------------T-IGHSVTSPDDTVRICEEIF 250 (252)
T ss_pred CCCcceeeeCCc----------------c-ccccccCchHHHHHHHHHh
Confidence 567877665422 1 2234556666666665554
No 41
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=99.20 E-value=1.6e-10 Score=127.90 Aligned_cols=194 Identities=15% Similarity=0.180 Sum_probs=108.3
Q ss_pred CEEEE--EecCCccCCCCCCCCccCCChhHHHHHHHHHh--c---CCEEEEcCCChhhHHHHh---CCc---CceEEccC
Q 015439 117 KIAIF--SDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAK--Y---FPTAIITGRSRDKVYELV---GLT---ELYYAGSH 183 (406)
Q Consensus 117 ~~lI~--lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~--~---~~v~I~SGR~~~~l~~~~---~l~---~~~li~~n 183 (406)
+++|+ +|+|.| +. +.+.+++.++.+.+ . ..|+++|||+...+.+++ +++ +..+||+-
T Consensus 770 ~~~~via~D~d~~-~~---------~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~v 839 (1050)
T TIGR02468 770 KRLFVIAVDCYDD-KD---------LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICNS 839 (1050)
T ss_pred ceEEEEEeccCCC-CC---------hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCC
Confidence 45555 999999 22 12333444444432 1 368999999999999987 343 56899999
Q ss_pred CceEeCCCCCcccCCCCCCcccccccCCccccccccccccchHHHHHHHHHHHhhh--------ccCceeee----ccee
Q 015439 184 GMDIMGPVDHTVSDDHPNSIKSTDQQGKEVNLFQPAREFLPMIDEVFRTLVENTKS--------IKGAKVEN----HKFC 251 (406)
Q Consensus 184 Ga~I~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~v~~~l~~~~~~--------~~g~~vE~----~~~~ 251 (406)
|..|+++...- .+.... ..|..|.. +-...|-. +.+.+.+..+... -++...+. ..+|
T Consensus 840 GTeIyy~~~~~--~~~~~~--~~D~~w~~----hI~~rW~g--e~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k 909 (1050)
T TIGR02468 840 GSELYYPSLNG--SEEGKL--VADQDYHS----HIEYRWGG--EGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHC 909 (1050)
T ss_pred CcceeccCcCC--CCCCCc--eECHHHHH----HHHccCCc--HHHHHHHHHHhhhcccccccccccceecChhhCCCce
Confidence 99999873110 000000 01111100 00111211 1222222221111 12333333 3356
Q ss_pred EEEEeeecCCCCHHHHHHHHHHHHhhCC-CeEE--EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccE-EEEeCC
Q 015439 252 VSVHYRNVDEKSWPTIAQCVHDVLKDYP-RLRL--THGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLP-IYIGDD 327 (406)
Q Consensus 252 l~~h~r~~d~~~~~~l~~~l~~~l~~~p-~l~v--~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~v-iaiGD~ 327 (406)
+++... ++.. ....+.+++.|.... ...+ .++..+|+|.|. +.|||.||++|+.++|++.+ .+ ++.||+
T Consensus 910 ~SY~v~--d~~~-~~~v~elr~~Lr~~gLr~~~iys~~~~~LDVlP~-~ASKgqAlRyL~~rwgi~l~---~v~VfaGdS 982 (1050)
T TIGR02468 910 YAFKVK--DPSK-VPPVKELRKLLRIQGLRCHAVYCRNGTRLNVIPL-LASRSQALRYLFVRWGIELA---NMAVFVGES 982 (1050)
T ss_pred EEEEec--Cccc-CccHHHHHHHHHhCCCceEEEeecCCcEeeeeeC-CCCHHHHHHHHHHHcCCChH---HeEEEeccC
Confidence 665422 2211 122344555554432 2333 345689999999 99999999999999999986 45 669999
Q ss_pred cC-C-HHHHHHH
Q 015439 328 RT-D-EDAFKVL 337 (406)
Q Consensus 328 ~N-D-edMf~~~ 337 (406)
.| | ++|+.-+
T Consensus 983 GntD~e~Ll~G~ 994 (1050)
T TIGR02468 983 GDTDYEGLLGGL 994 (1050)
T ss_pred CCCCHHHHhCCc
Confidence 99 9 5565444
No 42
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=99.15 E-value=1.7e-10 Score=106.51 Aligned_cols=194 Identities=18% Similarity=0.292 Sum_probs=120.3
Q ss_pred HHHHHHHHHhcCCEEEEcCCChhhHHHHhC-C----cCceEEccCCceEeCCCCCcccCCCCCCcccccccCCccccccc
Q 015439 144 MRSAVRNVAKYFPTAIITGRSRDKVYELVG-L----TELYYAGSHGMDIMGPVDHTVSDDHPNSIKSTDQQGKEVNLFQP 218 (406)
Q Consensus 144 ~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~-l----~~~~li~~nGa~I~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 218 (406)
|.+.|++|.+...|+||||-.+.++.+.+. . .-.|+.++||...+..+... |...+ .+. -.
T Consensus 1 M~~~L~~L~~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~----~~~~~--~~~--------lg 66 (220)
T PF03332_consen 1 MAELLQKLRKKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELI----WSQSI--AEF--------LG 66 (220)
T ss_dssp HHHHHHHHHTTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEE----EE--H--HHH--------HH
T ss_pred CHHHHHHHHhcCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCch----hhHhH--HHH--------cC
Confidence 678999999999999999999999999883 2 12489999999888765432 11000 000 00
Q ss_pred cccccchHHHHHHHHHHH-hhhccCceeeecceeEEEEe--eecCCCC---HH------HHHHHH-HHHHhhCCC--eEE
Q 015439 219 AREFLPMIDEVFRTLVEN-TKSIKGAKVENHKFCVSVHY--RNVDEKS---WP------TIAQCV-HDVLKDYPR--LRL 283 (406)
Q Consensus 219 a~~~~~~i~~v~~~l~~~-~~~~~g~~vE~~~~~l~~h~--r~~d~~~---~~------~l~~~l-~~~l~~~p~--l~v 283 (406)
.+.....++.+.+++.+. +....|.+||.+...+++.. |++..+. |. .+.+.+ +.+-+++|+ +.+
T Consensus 67 ee~~~~~in~~l~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~ 146 (220)
T PF03332_consen 67 EEKLQKLINFCLRYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTF 146 (220)
T ss_dssp HHHHHHHHHHHHHHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEE
Confidence 111123334444444321 11234889999888877763 3333221 21 122333 333456775 666
Q ss_pred E-ecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeC----CcCCHHHHHHHHhCCCceEEEecCCCCCccce
Q 015439 284 T-HGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGD----DRTDEDAFKVLRKGNRGYGILVSSVPKETKAF 358 (406)
Q Consensus 284 ~-~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD----~~NDedMf~~~~~~~~G~gVaVgna~~~t~A~ 358 (406)
. .|..++||.|+ ||||..+|++|.+.. + +.+++||| +.||-++|..-+ -.|+
T Consensus 147 siGGqiSiDvfp~-GwDKty~Lr~l~~~~-~-----~~I~FfGDkt~pGGNDyei~~~~r----t~g~------------ 203 (220)
T PF03332_consen 147 SIGGQISIDVFPK-GWDKTYCLRHLEDEG-F-----DEIHFFGDKTFPGGNDYEIFEDPR----TIGH------------ 203 (220)
T ss_dssp EEETTTEEEEEET-T-SGGGGGGGTTTTT-------SEEEEEESS-STTSTTHHHHHSTT----SEEE------------
T ss_pred ecCCceEEccccC-CccHHHHHHHHHhcc-c-----ceEEEEehhccCCCCCceeeecCC----ccEE------------
Confidence 4 57899999999 999999999987643 2 37999999 679999988742 1233
Q ss_pred EEeCCHHHHHHHHHHHH
Q 015439 359 YSLRDPSEVQEFLLSLV 375 (406)
Q Consensus 359 y~l~~~~eV~~fL~~L~ 375 (406)
.+.+|++.++.|+.|+
T Consensus 204 -~V~~p~DT~~~l~~l~ 219 (220)
T PF03332_consen 204 -TVTSPEDTIKQLKELF 219 (220)
T ss_dssp -E-SSHHHHHHHHHHHH
T ss_pred -EeCCHHHHHHHHHHHh
Confidence 3567899999888876
No 43
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.09 E-value=3.2e-10 Score=100.63 Aligned_cols=71 Identities=30% Similarity=0.276 Sum_probs=60.4
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCCC--ccceEEeCCH--HH-HHHHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPKE--TKAFYSLRDP--SE-VQEFLLS 373 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~~--t~A~y~l~~~--~e-V~~fL~~ 373 (406)
+|..+++.+++++|++++ .+++|||+.||.+|++.+ |++++|.++... ..|+|++..+ ++ +.++++.
T Consensus 76 ~k~~~~~~~~~~~~~~~~---~~~~vGDs~~D~~~~~~a-----g~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~ 147 (154)
T TIGR01670 76 NKLIAFSDILEKLALAPE---NVAYIGDDLIDWPVMEKV-----GLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCEL 147 (154)
T ss_pred chHHHHHHHHHHcCCCHH---HEEEECCCHHHHHHHHHC-----CCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHHH
Confidence 578899999999999875 799999999999999996 889999987643 5789999765 33 9999999
Q ss_pred HHHh
Q 015439 374 LVRW 377 (406)
Q Consensus 374 L~~~ 377 (406)
++..
T Consensus 148 ~~~~ 151 (154)
T TIGR01670 148 LLLA 151 (154)
T ss_pred HHHh
Confidence 8864
No 44
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.00 E-value=7.6e-10 Score=101.02 Aligned_cols=56 Identities=32% Similarity=0.372 Sum_probs=47.6
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEeC
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPK--ETKAFYSLR 362 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~--~t~A~y~l~ 362 (406)
+|..+++.+++.+|++++ ++++|||+.||.+|++.+ |++++|+++.+ +..|+|++.
T Consensus 96 ~k~~~l~~~~~~~gl~~~---ev~~VGDs~~D~~~a~~a-----G~~~~v~~~~~~~~~~a~~v~~ 153 (183)
T PRK09484 96 NKLIAFSDLLEKLAIAPE---QVAYIGDDLIDWPVMEKV-----GLSVAVADAHPLLLPRADYVTR 153 (183)
T ss_pred cHHHHHHHHHHHhCCCHH---HEEEECCCHHHHHHHHHC-----CCeEecCChhHHHHHhCCEEec
Confidence 467889999999999875 799999999999999997 89999987653 246899986
No 45
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.96 E-value=5.6e-10 Score=110.61 Aligned_cols=67 Identities=22% Similarity=0.237 Sum_probs=57.4
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCCC--ccceEEeC--CHHHHHHHHH
Q 015439 297 DWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPKE--TKAFYSLR--DPSEVQEFLL 372 (406)
Q Consensus 297 gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~~--t~A~y~l~--~~~eV~~fL~ 372 (406)
+-.|+.+++.+++++|++.+ ++++|||+.||++|++.+ |+||+| ||.++ ..|+++++ +-++|+-+|-
T Consensus 246 ~k~K~~~L~~la~~lgi~~~---qtIaVGDg~NDl~m~~~A-----GlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 246 AQYKADTLTRLAQEYEIPLA---QTVAIGDGANDLPMIKAA-----GLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred cccHHHHHHHHHHHcCCChh---hEEEEECCHHHHHHHHHC-----CCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 34899999999999999876 799999999999999996 899999 87654 58999997 4567777664
No 46
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.82 E-value=1.4e-08 Score=85.33 Aligned_cols=56 Identities=27% Similarity=0.373 Sum_probs=44.4
Q ss_pred EEEEecCCccCCCCCC---CCccCCChhHHHHHHHHHhc-CCEEEEcCCChhhHHHHhCC
Q 015439 119 AIFSDYDGTLSPIVDD---PDRAIMSDGMRSAVRNVAKY-FPTAIITGRSRDKVYELVGL 174 (406)
Q Consensus 119 lI~lD~DGTL~~~~~~---p~~~~~s~~~~~aL~~L~~~-~~v~I~SGR~~~~l~~~~~l 174 (406)
+++||+||||.+.... .....+.+.+.+.|++|+++ .+++|+|||....+..++..
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~ 60 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEE 60 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHH
Confidence 4789999999984211 01236789999999999998 48999999999998887753
No 47
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=98.60 E-value=7.7e-09 Score=106.74 Aligned_cols=71 Identities=18% Similarity=0.064 Sum_probs=63.6
Q ss_pred cCCCccCCCCCCC---CCceeecCCCCCCCcchhhhccHHHHHhcCCchhhhhccccCCCCCcccchhhhhhHHhhCCcc
Q 015439 26 HSRLPYSQPGASF---SGKCIAIPRKKPGKLDDVRSNGWLDAMKSSSPPRKKLIKDFNADVGLDDFDIAYCSWMLKYPSA 102 (406)
Q Consensus 26 ~~~~~~s~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~p~~ 102 (406)
|+.|++|||+|++ +||++||| |+++++ +.+|+.|++||+.||+.|+. .+..++.+++...|+..+..+
T Consensus 380 ~GvLILSefAGaA~~L~~AllVNP----~d~~~~--A~Ai~~AL~Mp~~Er~~R~~---~l~~~v~~~dv~~W~~~fL~~ 450 (474)
T PRK10117 380 PGVLVLSQFAGAANELTSALIVNP----YDRDEV--AAALDRALTMPLAERISRHA---EMLDVIVKNDINHWQECFISD 450 (474)
T ss_pred CccEEEecccchHHHhCCCeEECC----CCHHHH--HHHHHHHHcCCHHHHHHHHH---HHHHHhhhCCHHHHHHHHHHH
Confidence 5669999999986 49999999 889999 99999999999999999997 457899999999999998877
Q ss_pred chh
Q 015439 103 LKY 105 (406)
Q Consensus 103 L~~ 105 (406)
|..
T Consensus 451 L~~ 453 (474)
T PRK10117 451 LKQ 453 (474)
T ss_pred HHH
Confidence 753
No 48
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.59 E-value=9.3e-08 Score=85.20 Aligned_cols=71 Identities=15% Similarity=0.065 Sum_probs=53.6
Q ss_pred EEEEecCCccCCCCCC------CCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHH---HHh-C-------CcCceEE
Q 015439 119 AIFSDYDGTLSPIVDD------PDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVY---ELV-G-------LTELYYA 180 (406)
Q Consensus 119 lI~lD~DGTL~~~~~~------p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~---~~~-~-------l~~~~li 180 (406)
+|++|+||||+..... -....+++.+.++++++++++ +|+++|||+...+. +++ . ++..+++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li 80 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVL 80 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEE
Confidence 4899999999983200 001578999999999999986 89999999988774 444 1 3445788
Q ss_pred ccCCceEeC
Q 015439 181 GSHGMDIMG 189 (406)
Q Consensus 181 ~~nGa~I~~ 189 (406)
++||+.+..
T Consensus 81 ~~~g~~~~~ 89 (157)
T smart00775 81 LSPDRLFAA 89 (157)
T ss_pred EcCCcchhh
Confidence 999988754
No 49
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.48 E-value=8.2e-07 Score=83.04 Aligned_cols=46 Identities=26% Similarity=0.299 Sum_probs=42.0
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecC
Q 015439 297 DWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSS 350 (406)
Q Consensus 297 gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgn 350 (406)
+-.|..+++.+++.+|++.+ .++++|||.||.+||+.+ |++|++..
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~---~~~a~gDs~nDlpml~~a-----g~~ia~n~ 187 (212)
T COG0560 142 GEGKAKALRELAAELGIPLE---ETVAYGDSANDLPMLEAA-----GLPIAVNP 187 (212)
T ss_pred cchHHHHHHHHHHHcCCCHH---HeEEEcCchhhHHHHHhC-----CCCeEeCc
Confidence 45899999999999999875 799999999999999997 89999974
No 50
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=98.40 E-value=5e-08 Score=100.54 Aligned_cols=71 Identities=14% Similarity=0.083 Sum_probs=62.5
Q ss_pred ccCCCccCCCCCCCC---CceeecCCCCCCCcchhhhccHHHHHhcCCchhhhhccccCCCCCcccchhhhhhHHhhCCc
Q 015439 25 IHSRLPYSQPGASFS---GKCIAIPRKKPGKLDDVRSNGWLDAMKSSSPPRKKLIKDFNADVGLDDFDIAYCSWMLKYPS 101 (406)
Q Consensus 25 ~~~~~~~s~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~p~ 101 (406)
-++.|++|||+||++ +|++||| |+.++| +.+|..|++||++||+.|++ .+...+.+++.+.|+.++-.
T Consensus 405 ~~G~LiLSeFaGaa~~L~~AliVNP----~d~~~v--a~ai~~AL~m~~eEr~~r~~---~~~~~v~~~d~~~W~~~fl~ 475 (486)
T COG0380 405 KPGVLILSEFAGAASELRDALIVNP----WDTKEV--ADAIKRALTMSLEERKERHE---KLLKQVLTHDVARWANSFLD 475 (486)
T ss_pred CCCcEEEeccccchhhhccCEeECC----CChHHH--HHHHHHHhcCCHHHHHHHHH---HHHHHHHhhhHHHHHHHHHH
Confidence 356699999999874 9999999 888999 99999999999999999998 55889999999999988765
Q ss_pred cch
Q 015439 102 ALK 104 (406)
Q Consensus 102 ~L~ 104 (406)
.|.
T Consensus 476 ~la 478 (486)
T COG0380 476 DLA 478 (486)
T ss_pred HHH
Confidence 554
No 51
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=98.38 E-value=5.3e-08 Score=101.29 Aligned_cols=72 Identities=8% Similarity=-0.025 Sum_probs=64.0
Q ss_pred cCCCccCCCCCCC---CCceeecCCCCCCCcchhhhccHHHHHhcCCchhhhhccccCCCCCcccchhhhhhHHhhCCcc
Q 015439 26 HSRLPYSQPGASF---SGKCIAIPRKKPGKLDDVRSNGWLDAMKSSSPPRKKLIKDFNADVGLDDFDIAYCSWMLKYPSA 102 (406)
Q Consensus 26 ~~~~~~s~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~p~~ 102 (406)
++.|++|||+|++ .||++||| |+++++ +.+|+.|++||+.||+.|+. .+..++..++.+.|+..+..+
T Consensus 409 ~GvLILSefaGaa~~l~~AllVNP----~d~~~~--A~ai~~AL~m~~~Er~~R~~---~l~~~v~~~d~~~W~~~fl~~ 479 (487)
T TIGR02398 409 DGVLVLSEFAGAAVELKGALLTNP----YDPVRM--DETIYVALAMPKAEQQARMR---EMFDAVNYYDVQRWADEFLAA 479 (487)
T ss_pred CCCEEEeccccchhhcCCCEEECC----CCHHHH--HHHHHHHHcCCHHHHHHHHH---HHHHHHhhCCHHHHHHHHHHH
Confidence 5569999999986 49999999 888999 99999999999999999997 458899999999999998877
Q ss_pred chhH
Q 015439 103 LKYF 106 (406)
Q Consensus 103 L~~f 106 (406)
|...
T Consensus 480 l~~~ 483 (487)
T TIGR02398 480 VSPQ 483 (487)
T ss_pred hhhc
Confidence 7643
No 52
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=98.37 E-value=3.9e-08 Score=102.28 Aligned_cols=70 Identities=13% Similarity=0.085 Sum_probs=54.4
Q ss_pred ccCCCccCCCCCCC---C-CceeecCCCCCCCcchhhhccHHHHHhcCCchhhhhccccCCCCCcccchhhhhhHHhhCC
Q 015439 25 IHSRLPYSQPGASF---S-GKCIAIPRKKPGKLDDVRSNGWLDAMKSSSPPRKKLIKDFNADVGLDDFDIAYCSWMLKYP 100 (406)
Q Consensus 25 ~~~~~~~s~~~~~~---~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~p 100 (406)
-|+.|++|||+|++ + ||++||| |+++++ +.+|+.|++||+.||+.||. .+..++.+++...|+.++-
T Consensus 399 ~~GvLiLSefaGaa~~L~~~al~VNP----~d~~~~--A~ai~~AL~M~~~Er~~r~~---~~~~~v~~~~~~~W~~~~l 469 (474)
T PF00982_consen 399 NPGVLILSEFAGAAEQLSEAALLVNP----WDIEEV--ADAIHEALTMPPEERKERHA---RLREYVREHDVQWWAESFL 469 (474)
T ss_dssp S--EEEEETTBGGGGT-TTS-EEE-T----T-HHHH--HHHHHHHHT--HHHHHHHHH---HHHHHHHHT-HHHHHHHHH
T ss_pred CCCceEeeccCCHHHHcCCccEEECC----CChHHH--HHHHHHHHcCCHHHHHHHHH---HHHHHhHhCCHHHHHHHHH
Confidence 45669999999986 3 7899999 899999 99999999999999999997 4478999999999998876
Q ss_pred ccc
Q 015439 101 SAL 103 (406)
Q Consensus 101 ~~L 103 (406)
..|
T Consensus 470 ~~L 472 (474)
T PF00982_consen 470 RDL 472 (474)
T ss_dssp HHH
T ss_pred HHh
Confidence 555
No 53
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.32 E-value=4e-07 Score=82.13 Aligned_cols=70 Identities=24% Similarity=0.372 Sum_probs=57.4
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCCC--ccceEEeCCH--H-HHHHHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPKE--TKAFYSLRDP--S-EVQEFLLS 373 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~~--t~A~y~l~~~--~-eV~~fL~~ 373 (406)
.|-..++.++++++++++ ++++|||+.||++|++.+ |++++|+||... ..|+|++..+ + .|.++++.
T Consensus 82 pkp~~~~~~~~~l~~~~~---ev~~iGD~~nDi~~~~~a-----g~~~am~nA~~~lk~~A~~I~~~~~~~g~v~e~~e~ 153 (169)
T TIGR02726 82 KKTEPYAQMLEEMNISDA---EVCYVGDDLVDLSMMKRV-----GLAVAVGDAVADVKEAAAYVTTARGGHGAVREVAEL 153 (169)
T ss_pred CCHHHHHHHHHHcCcCHH---HEEEECCCHHHHHHHHHC-----CCeEECcCchHHHHHhCCEEcCCCCCCCHHHHHHHH
Confidence 456789999999999875 799999999999999996 899999999754 6799988533 3 35777777
Q ss_pred HHH
Q 015439 374 LVR 376 (406)
Q Consensus 374 L~~ 376 (406)
++.
T Consensus 154 il~ 156 (169)
T TIGR02726 154 ILK 156 (169)
T ss_pred HHH
Confidence 764
No 54
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.16 E-value=1.1e-06 Score=76.96 Aligned_cols=73 Identities=25% Similarity=0.281 Sum_probs=61.4
Q ss_pred CCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCCC--ccceEEeC---CHHHHHHHHH
Q 015439 298 WNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPKE--TKAFYSLR---DPSEVQEFLL 372 (406)
Q Consensus 298 vsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~~--t~A~y~l~---~~~eV~~fL~ 372 (406)
-+|-.+.+.|++.+++..+ ++.|+||+.||+++|+.+ |+++++.+|++. ..|+|++. ..-.|.++++
T Consensus 82 ~dK~~a~~~L~~~~~l~~e---~~ayiGDD~~Dlpvm~~v-----Gls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~d 153 (170)
T COG1778 82 SDKLAAFEELLKKLNLDPE---EVAYVGDDLVDLPVMEKV-----GLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCD 153 (170)
T ss_pred HhHHHHHHHHHHHhCCCHH---HhhhhcCccccHHHHHHc-----CCcccccccCHHHHHhhHhhhhccCcchHHHHHHH
Confidence 3899999999999999986 899999999999999997 999999999875 57999985 3345777777
Q ss_pred HHHHhh
Q 015439 373 SLVRWK 378 (406)
Q Consensus 373 ~L~~~~ 378 (406)
-++...
T Consensus 154 lil~aq 159 (170)
T COG1778 154 LILQAQ 159 (170)
T ss_pred HHHHcc
Confidence 666443
No 55
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.13 E-value=5.3e-06 Score=80.41 Aligned_cols=71 Identities=18% Similarity=0.119 Sum_probs=55.2
Q ss_pred ccCCEEEEEecCCccCCCCCCCCccC--C-ChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHh---CCcC-ceEEccCCc
Q 015439 114 KKKKIAIFSDYDGTLSPIVDDPDRAI--M-SDGMRSAVRNVAKYF-PTAIITGRSRDKVYELV---GLTE-LYYAGSHGM 185 (406)
Q Consensus 114 ~~k~~lI~lD~DGTL~~~~~~p~~~~--~-s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~---~l~~-~~li~~nGa 185 (406)
=.-.++|+|||||||++ +... + +|.+.++|++|++.+ +++|+|++++..+...+ |+.. ...|.++|.
T Consensus 123 ~~~~kvIvFDLDgTLi~-----~~~~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gd 197 (301)
T TIGR01684 123 FEPPHVVVFDLDSTLIT-----DEEPVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGH 197 (301)
T ss_pred cccceEEEEecCCCCcC-----CCCccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCc
Confidence 34467999999999999 3333 4 499999999999995 89999999999887765 4543 247788887
Q ss_pred eEeC
Q 015439 186 DIMG 189 (406)
Q Consensus 186 ~I~~ 189 (406)
....
T Consensus 198 v~~~ 201 (301)
T TIGR01684 198 KAEE 201 (301)
T ss_pred cccC
Confidence 7654
No 56
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.07 E-value=6e-05 Score=72.11 Aligned_cols=64 Identities=19% Similarity=0.211 Sum_probs=48.5
Q ss_pred EEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcC---CChhhHHHHhC---C--cCceEEccCCceE
Q 015439 118 IAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITG---RSRDKVYELVG---L--TELYYAGSHGMDI 187 (406)
Q Consensus 118 ~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SG---R~~~~l~~~~~---l--~~~~li~~nGa~I 187 (406)
++|+||+||||+. ....++ ...++|++|.+.+ +|+++|| |++..+.+.+. + ....+++++|+.+
T Consensus 2 ~~~~~D~DGtl~~-----~~~~i~-~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~ 74 (249)
T TIGR01457 2 KGYLIDLDGTMYK-----GKERIP-EAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATA 74 (249)
T ss_pred CEEEEeCCCceEc-----CCeeCc-CHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHH
Confidence 4789999999998 344454 7899999999985 8999995 88988877653 3 2234777777753
No 57
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.06 E-value=6.5e-06 Score=70.57 Aligned_cols=52 Identities=12% Similarity=0.043 Sum_probs=39.7
Q ss_pred EEEEEecCCccCCCCCCC-CccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHH
Q 015439 118 IAIFSDYDGTLSPIVDDP-DRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVY 169 (406)
Q Consensus 118 ~lI~lD~DGTL~~~~~~p-~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~ 169 (406)
++|++|+||||+.....+ ....+.++++++|+++.+.+ .++++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 479999999998732111 12346789999999998774 79999999987655
No 58
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.81 E-value=3.9e-05 Score=74.51 Aligned_cols=72 Identities=14% Similarity=0.020 Sum_probs=54.4
Q ss_pred ccCCEEEEEecCCccCCCCCCCCccCC---ChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHh---CCcC-ceEEccCCc
Q 015439 114 KKKKIAIFSDYDGTLSPIVDDPDRAIM---SDGMRSAVRNVAKYF-PTAIITGRSRDKVYELV---GLTE-LYYAGSHGM 185 (406)
Q Consensus 114 ~~k~~lI~lD~DGTL~~~~~~p~~~~~---s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~---~l~~-~~li~~nGa 185 (406)
-.-.++|+||+||||++ +...+ +|.+.++|++|++.+ .++|+|+.++..+...+ ++.. ...+.++|.
T Consensus 125 ~~~~~~i~~D~D~TL~~-----~~~~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~ 199 (303)
T PHA03398 125 WEIPHVIVFDLDSTLIT-----DEEPVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGR 199 (303)
T ss_pred eeeccEEEEecCCCccC-----CCCccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCC
Confidence 34467999999999999 34445 689999999999986 89999988888777765 4433 236777777
Q ss_pred eEeCC
Q 015439 186 DIMGP 190 (406)
Q Consensus 186 ~I~~~ 190 (406)
.....
T Consensus 200 i~~k~ 204 (303)
T PHA03398 200 KAGEY 204 (303)
T ss_pred ccccc
Confidence 65544
No 59
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=97.25 E-value=0.00031 Score=67.52 Aligned_cols=65 Identities=15% Similarity=0.105 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeCCc-CCHHHHHHHHhCCCceEEEecCCC-----C---CccceEEeCCHHHHHHH
Q 015439 300 KGKAVEFLLESLGLSDSDDVLPIYIGDDR-TDEDAFKVLRKGNRGYGILVSSVP-----K---ETKAFYSLRDPSEVQEF 370 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~~~~~~~viaiGD~~-NDedMf~~~~~~~~G~gVaVgna~-----~---~t~A~y~l~~~~eV~~f 370 (406)
+-..++.+++++|++++ .+++|||+. +|+.+=+.+. -.+|.|..+. . +..++|++++..++.++
T Consensus 181 ~p~~~~~~~~~~~~~~~---~~~~vGD~~~~Di~~a~~~G----~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~ 253 (257)
T TIGR01458 181 SKTFFLEALRATGCEPE---EAVMIGDDCRDDVGGAQDCG----MRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDL 253 (257)
T ss_pred CHHHHHHHHHHhCCChh---hEEEECCCcHHHHHHHHHcC----CeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHH
Confidence 45678888999998876 799999995 8988766651 2466674431 1 13478899999998876
Q ss_pred H
Q 015439 371 L 371 (406)
Q Consensus 371 L 371 (406)
|
T Consensus 254 l 254 (257)
T TIGR01458 254 I 254 (257)
T ss_pred H
Confidence 5
No 60
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=97.24 E-value=0.0005 Score=58.95 Aligned_cols=56 Identities=20% Similarity=0.129 Sum_probs=41.1
Q ss_pred EEEEEecCCccCCCCCCCCcc-------CCChhHHHHHHHHHhcC-CEEEEcCC-ChhhHHHHhC
Q 015439 118 IAIFSDYDGTLSPIVDDPDRA-------IMSDGMRSAVRNVAKYF-PTAIITGR-SRDKVYELVG 173 (406)
Q Consensus 118 ~lI~lD~DGTL~~~~~~p~~~-------~~s~~~~~aL~~L~~~~-~v~I~SGR-~~~~l~~~~~ 173 (406)
++|++|+||||++........ .+-+.+.+.|+.|.+++ +++|+|++ ....+..++.
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~ 65 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLK 65 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHH
Confidence 478999999999842100011 24679999999999885 89999999 6766666554
No 61
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.18 E-value=0.00043 Score=59.10 Aligned_cols=47 Identities=28% Similarity=0.324 Sum_probs=36.7
Q ss_pred EEEEEecCCccCCCC--CCC-CccCCChhHHHHHHHHHhcC-CEEEEcCCC
Q 015439 118 IAIFSDYDGTLSPIV--DDP-DRAIMSDGMRSAVRNVAKYF-PTAIITGRS 164 (406)
Q Consensus 118 ~lI~lD~DGTL~~~~--~~p-~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~ 164 (406)
++++||+||||++.. .++ ....+.+.++++|+.|.+.+ +++|+|+++
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~ 51 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQS 51 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCc
Confidence 478999999999521 111 23467789999999999884 899999998
No 62
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.13 E-value=0.00099 Score=59.84 Aligned_cols=51 Identities=16% Similarity=0.109 Sum_probs=36.3
Q ss_pred cCCEEEEEecCCccCCCCC------CCCccC-CChhHHHHHHHHHhcC-CEEEEcCCCh
Q 015439 115 KKKIAIFSDYDGTLSPIVD------DPDRAI-MSDGMRSAVRNVAKYF-PTAIITGRSR 165 (406)
Q Consensus 115 ~k~~lI~lD~DGTL~~~~~------~p~~~~-~s~~~~~aL~~L~~~~-~v~I~SGR~~ 165 (406)
.+.+++++|+||||+...+ +|++-. +-+.+.++|++|.+.+ +++|+|..+.
T Consensus 11 ~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 11 PQSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred CcCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 3567899999999997321 111111 3478999999998885 8999996554
No 63
>PRK10444 UMP phosphatase; Provisional
Probab=97.08 E-value=0.00061 Score=65.24 Aligned_cols=49 Identities=18% Similarity=0.283 Sum_probs=41.2
Q ss_pred EEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHh
Q 015439 118 IAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELV 172 (406)
Q Consensus 118 ~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~ 172 (406)
++++||+||||.. .. .+.|...++|++|++.+ +++++|+|+.....++.
T Consensus 2 ~~v~~DlDGtL~~-----~~-~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~ 51 (248)
T PRK10444 2 KNVICDIDGVLMH-----DN-VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLA 51 (248)
T ss_pred cEEEEeCCCceEe-----CC-eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHH
Confidence 5789999999998 33 56789999999999985 89999999997765554
No 64
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=97.05 E-value=0.0031 Score=67.33 Aligned_cols=61 Identities=16% Similarity=0.267 Sum_probs=46.9
Q ss_pred HHhccCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC--CEEEEcCCChhhHHHHhC
Q 015439 111 SEAKKKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF--PTAIITGRSRDKVYELVG 173 (406)
Q Consensus 111 ~~~~~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~--~v~I~SGR~~~~l~~~~~ 173 (406)
.+.....+.+++..||+++.... -...+-++++++|+.|.+.+ +++|+||.+...+..+.+
T Consensus 358 ~~~~~g~~~~~v~~~~~~~g~i~--~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~ 420 (556)
T TIGR01525 358 EGESQGKTVVFVAVDGELLGVIA--LRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAA 420 (556)
T ss_pred HHhhCCcEEEEEEECCEEEEEEE--ecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHH
Confidence 44555567888899999887432 13457789999999998875 799999999988877664
No 65
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.01 E-value=0.0022 Score=61.07 Aligned_cols=67 Identities=16% Similarity=0.067 Sum_probs=46.9
Q ss_pred hhCCccchhHHHHHHHhccCCE-EEEEecCCccCCCCCC-------CCc--------------------c--CCChhHHH
Q 015439 97 LKYPSALKYFEKIMSEAKKKKI-AIFSDYDGTLSPIVDD-------PDR--------------------A--IMSDGMRS 146 (406)
Q Consensus 97 ~~~p~~L~~f~~i~~~~~~k~~-lI~lD~DGTL~~~~~~-------p~~--------------------~--~~s~~~~~ 146 (406)
.+.|-..=+-++|..-.++++. .|+||+||||++.... ++. . .+-+.+++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~e 121 (237)
T TIGR01672 42 EQAPIHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQ 121 (237)
T ss_pred ccCCeeEEEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHH
Confidence 4455455578999977777765 9999999999984320 110 0 11112788
Q ss_pred HHHHHHhcC-CEEEEcCC
Q 015439 147 AVRNVAKYF-PTAIITGR 163 (406)
Q Consensus 147 aL~~L~~~~-~v~I~SGR 163 (406)
.|+.+.+++ +++|||+|
T Consensus 122 lL~~l~~~G~~i~iVTnr 139 (237)
T TIGR01672 122 LIDMHQRRGDAIFFVTGR 139 (237)
T ss_pred HHHHHHHCCCEEEEEeCC
Confidence 899998885 89999999
No 66
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=96.90 E-value=0.0012 Score=64.17 Aligned_cols=44 Identities=18% Similarity=0.202 Sum_probs=35.3
Q ss_pred EEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhh
Q 015439 118 IAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDK 167 (406)
Q Consensus 118 ~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~ 167 (406)
++|+||+||||.. +.. .-+.+.++|++|.+.+ +++++|+|+...
T Consensus 3 ~~~~~D~DGtl~~-----~~~-~~~ga~e~l~~L~~~g~~~~~~Tnns~~~ 47 (279)
T TIGR01452 3 QGFIFDCDGVLWL-----GER-VVPGAPELLDRLARAGKAALFVTNNSTKS 47 (279)
T ss_pred cEEEEeCCCceEc-----CCe-eCcCHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 5789999999988 333 3455999999999885 899999987543
No 67
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=96.87 E-value=0.0003 Score=73.27 Aligned_cols=72 Identities=11% Similarity=0.020 Sum_probs=59.8
Q ss_pred ccc--CCCccCCCCCCC---CCceeecCCCCCCCcchhhhccHHHHHhcCCchhhhhccccCCCCCcccchhhhhhHHhh
Q 015439 24 GIH--SRLPYSQPGASF---SGKCIAIPRKKPGKLDDVRSNGWLDAMKSSSPPRKKLIKDFNADVGLDDFDIAYCSWMLK 98 (406)
Q Consensus 24 ~~~--~~~~~s~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 98 (406)
|.| +.+++|+++|+. .++++||| |+.+++ +.+|..++.|++.+|+.++.. +..++..++...|+.+
T Consensus 379 g~P~~g~vVlS~~~G~~~~l~~gllVnP----~d~~~l--A~aI~~aL~~~~~er~~r~~~---~~~~v~~~~~~~W~~~ 449 (456)
T TIGR02400 379 QDPKDGVLILSEFAGAAQELNGALLVNP----YDIDGM--ADAIARALTMPLEEREERHRA---MMDKLRKNDVQRWRED 449 (456)
T ss_pred cCCCCceEEEeCCCCChHHhCCcEEECC----CCHHHH--HHHHHHHHcCCHHHHHHHHHH---HHHHHhhCCHHHHHHH
Confidence 555 338999999975 38999999 888988 999999999999999988863 3667888999999988
Q ss_pred CCccch
Q 015439 99 YPSALK 104 (406)
Q Consensus 99 ~p~~L~ 104 (406)
+-.+|.
T Consensus 450 ~l~~l~ 455 (456)
T TIGR02400 450 FLSDLN 455 (456)
T ss_pred HHHHhh
Confidence 776654
No 68
>PLN02645 phosphoglycolate phosphatase
Probab=96.82 E-value=0.0012 Score=65.30 Aligned_cols=66 Identities=17% Similarity=0.086 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeCCc-CCHHHHHHHHhCCCceEEEecCCC--C--------CccceEEeCCHHHHH
Q 015439 300 KGKAVEFLLESLGLSDSDDVLPIYIGDDR-TDEDAFKVLRKGNRGYGILVSSVP--K--------ETKAFYSLRDPSEVQ 368 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~~~~~~~viaiGD~~-NDedMf~~~~~~~~G~gVaVgna~--~--------~t~A~y~l~~~~eV~ 368 (406)
+-..++.++++++++.+ .+++|||+. +|+.+=+.+. -.+|.|..+. . .-.++|++++..++.
T Consensus 232 ~p~~~~~a~~~~~~~~~---~~~~VGD~~~~Di~~A~~aG----~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~ 304 (311)
T PLN02645 232 STFMMDYLANKFGIEKS---QICMVGDRLDTDILFGQNGG----CKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFL 304 (311)
T ss_pred hHHHHHHHHHHcCCCcc---cEEEEcCCcHHHHHHHHHcC----CCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHH
Confidence 34577888888998876 799999996 9998766651 2466664332 1 124789999999887
Q ss_pred HHHH
Q 015439 369 EFLL 372 (406)
Q Consensus 369 ~fL~ 372 (406)
++++
T Consensus 305 ~~~~ 308 (311)
T PLN02645 305 TLKA 308 (311)
T ss_pred HHhh
Confidence 7665
No 69
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=96.81 E-value=0.00085 Score=62.26 Aligned_cols=64 Identities=28% Similarity=0.448 Sum_probs=50.7
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCC-CccceEEeCCH--HHHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPK-ETKAFYSLRDP--SEVQEF 370 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~-~t~A~y~l~~~--~eV~~f 370 (406)
.|+..++.++++++++++ .+++|||+.+|.+|.+.+ |++|+++..+. ...|+|++.+. .++..+
T Consensus 152 ~k~~~~~~~~~~~~~~~~---~~i~iGDs~~Di~aa~~a-----g~~i~~~~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPE---NTVAVGDGANDLSMIKAA-----GLGIAFNAKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccHHHHHHHHHHcCCCHH---HEEEEECCHHHHHHHHhC-----CCeEEeCCCHHHHHhchhccCCCCHHHHHhh
Confidence 489999999999999875 799999999999999996 88898864322 25789998754 455443
No 70
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.48 E-value=0.0023 Score=57.69 Aligned_cols=61 Identities=18% Similarity=0.120 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceE--EEecCCCC-----CccceEEeCCHHHHH
Q 015439 300 KGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYG--ILVSSVPK-----ETKAFYSLRDPSEVQ 368 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~g--VaVgna~~-----~t~A~y~l~~~~eV~ 368 (406)
+-..+...++++|++++ .+++|||+.+|+.+=+.+ |+. |.+.-... +..|+++++++.++.
T Consensus 108 ~p~~~~~a~~~~~~~~~---~~v~VGDs~~Di~aA~~a-----G~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 108 KPGMLLQARKELHIDMA---QSYMVGDKLEDMQAGVAA-----KVKTNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred CHHHHHHHHHHcCcChh---hEEEEcCCHHHHHHHHHC-----CCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence 35567888899999876 799999999998877665 553 34433221 124889999888764
No 71
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=96.47 E-value=0.0033 Score=57.14 Aligned_cols=45 Identities=33% Similarity=0.409 Sum_probs=40.3
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCC
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSV 351 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna 351 (406)
.|+.+++.+++.+|++++ .+++|||+.+|.+|++.+ |.++++...
T Consensus 147 ~k~~~~~~~~~~~~~~~~---~~i~iGDs~~D~~~a~~a-----g~~~a~~~~ 191 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLT---ETVAVGDSKNDLPMFEVA-----DISISLGDE 191 (201)
T ss_pred cHHHHHHHHHHHhCCCHH---HEEEEcCCHhHHHHHHhc-----CCeEEECCC
Confidence 799999999999999775 799999999999999997 899999653
No 72
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=96.32 E-value=0.0024 Score=56.89 Aligned_cols=40 Identities=30% Similarity=0.328 Sum_probs=35.3
Q ss_pred EcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHH
Q 015439 293 RPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKV 336 (406)
Q Consensus 293 ~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~ 336 (406)
.+. +.+|+.+++.+++.+|++.+ .+++|||+.||.+|++.
T Consensus 137 ~~~-~~~K~~~l~~~~~~~~~~~~---~~~~iGDs~~D~~~~~~ 176 (177)
T TIGR01488 137 NPE-GECKGKVLKELLEESKITLK---KIIAVGDSVNDLPMLKL 176 (177)
T ss_pred cCC-cchHHHHHHHHHHHhCCCHH---HEEEEeCCHHHHHHHhc
Confidence 355 88999999999999988765 79999999999999875
No 73
>PRK10671 copA copper exporting ATPase; Provisional
Probab=96.17 E-value=0.0057 Score=68.43 Aligned_cols=68 Identities=21% Similarity=0.213 Sum_probs=52.2
Q ss_pred EEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCCC--ccceEEe--CCHH
Q 015439 290 LEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPKE--TKAFYSL--RDPS 365 (406)
Q Consensus 290 lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~~--t~A~y~l--~~~~ 365 (406)
-++.|. +|..+++.+... .+ .+++|||+.||.+|++.+ |.||+||++... ..|++++ ++.+
T Consensus 694 ~~~~p~---~K~~~i~~l~~~----~~---~v~~vGDg~nD~~al~~A-----gvgia~g~g~~~a~~~ad~vl~~~~~~ 758 (834)
T PRK10671 694 AGVLPD---GKAEAIKRLQSQ----GR---QVAMVGDGINDAPALAQA-----DVGIAMGGGSDVAIETAAITLMRHSLM 758 (834)
T ss_pred eCCCHH---HHHHHHHHHhhc----CC---EEEEEeCCHHHHHHHHhC-----CeeEEecCCCHHHHHhCCEEEecCCHH
Confidence 345555 688888776542 22 699999999999999996 899999997653 4577766 5778
Q ss_pred HHHHHHH
Q 015439 366 EVQEFLL 372 (406)
Q Consensus 366 eV~~fL~ 372 (406)
++..+++
T Consensus 759 ~i~~~i~ 765 (834)
T PRK10671 759 GVADALA 765 (834)
T ss_pred HHHHHHH
Confidence 8888876
No 74
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=96.14 E-value=0.053 Score=61.18 Aligned_cols=67 Identities=22% Similarity=0.239 Sum_probs=48.4
Q ss_pred EEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecC-CCC--CccceEEe--CCHH
Q 015439 291 EIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSS-VPK--ETKAFYSL--RDPS 365 (406)
Q Consensus 291 EI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgn-a~~--~t~A~y~l--~~~~ 365 (406)
.+.|. +|...++.|- ..| + .++++||+.||.+|++.+ +.||+||. +.. +..|++++ ++..
T Consensus 600 r~~P~---~K~~iv~~lq-~~g---~---~v~mvGDGvND~pAl~~A-----dVGia~g~~g~~va~~aaDivl~dd~~~ 664 (884)
T TIGR01522 600 RASPE---HKMKIVKALQ-KRG---D---VVAMTGDGVNDAPALKLA-----DIGVAMGQTGTDVAKEAADMILTDDDFA 664 (884)
T ss_pred ECCHH---HHHHHHHHHH-HCC---C---EEEEECCCcccHHHHHhC-----CeeEecCCCcCHHHHHhcCEEEcCCCHH
Confidence 45566 7877666654 334 2 699999999999999997 79999985 332 24789999 4566
Q ss_pred HHHHHHH
Q 015439 366 EVQEFLL 372 (406)
Q Consensus 366 eV~~fL~ 372 (406)
.+.+.++
T Consensus 665 ~i~~~i~ 671 (884)
T TIGR01522 665 TILSAIE 671 (884)
T ss_pred HHHHHHH
Confidence 7666554
No 75
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=96.11 E-value=0.013 Score=54.30 Aligned_cols=67 Identities=19% Similarity=0.197 Sum_probs=52.7
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCce-EEEecCCC--C----CccceEEeCCHHHHHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGY-GILVSSVP--K----ETKAFYSLRDPSEVQEFL 371 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~-gVaVgna~--~----~t~A~y~l~~~~eV~~fL 371 (406)
.|..+++.+++.++++++ .+++|||+.+|.++.+.+ |+ +|.|..+. . ...+.|++++..++..+|
T Consensus 150 p~~~~~~~~~~~~~~~~~---~~i~igD~~~Di~~a~~~-----g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l 221 (226)
T PRK13222 150 PDPAPLLLACEKLGLDPE---EMLFVGDSRNDIQAARAA-----GCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLL 221 (226)
T ss_pred cChHHHHHHHHHcCCChh---heEEECCCHHHHHHHHHC-----CCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHH
Confidence 357889999999999875 799999999999999997 44 56664321 1 236889999999998887
Q ss_pred HH
Q 015439 372 LS 373 (406)
Q Consensus 372 ~~ 373 (406)
..
T Consensus 222 ~~ 223 (226)
T PRK13222 222 GL 223 (226)
T ss_pred HH
Confidence 53
No 76
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.07 E-value=0.0084 Score=52.41 Aligned_cols=47 Identities=21% Similarity=0.229 Sum_probs=35.7
Q ss_pred EEEEecCCccCCCCC-----CCCccCCChhHHHHHHHHHhcC-CEEEEcCCCh
Q 015439 119 AIFSDYDGTLSPIVD-----DPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSR 165 (406)
Q Consensus 119 lI~lD~DGTL~~~~~-----~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~ 165 (406)
+++||+||||..... .+....+-+.+.++|+.|.+.+ .++|+|..+.
T Consensus 2 ~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~ 54 (147)
T TIGR01656 2 ALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSG 54 (147)
T ss_pred eEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCc
Confidence 688999999998432 1112245688999999999885 8999998763
No 77
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=96.06 E-value=0.25 Score=49.66 Aligned_cols=60 Identities=20% Similarity=0.138 Sum_probs=41.6
Q ss_pred HHHHHHhc-cCCEEEEEecCCccCCCCCCCCccCC--ChhHHHHHHHHHhc-CCEEEEcCCChhhHHHH
Q 015439 107 EKIMSEAK-KKKIAIFSDYDGTLSPIVDDPDRAIM--SDGMRSAVRNVAKY-FPTAIITGRSRDKVYEL 171 (406)
Q Consensus 107 ~~i~~~~~-~k~~lI~lD~DGTL~~~~~~p~~~~~--s~~~~~aL~~L~~~-~~v~I~SGR~~~~l~~~ 171 (406)
.||++..+ ++-+|+-||=|+||.. |.+.+ +..+..-|-+|-+. ..|+|+|.=.|....++
T Consensus 136 AQi~al~~~~~L~LvTFDgDvTLY~-----DG~sl~~d~pvi~~ii~LL~~gv~VgIVTAAGY~~a~kY 199 (408)
T PF06437_consen 136 AQIMALAKNYGLKLVTFDGDVTLYE-----DGASLEPDNPVIPRIIKLLRRGVKVGIVTAAGYPGAEKY 199 (408)
T ss_pred HHHHHhcccCCceEEEEcCCccccc-----CCCCCCCCchHHHHHHHHHhcCCeEEEEeCCCCCChHHH
Confidence 35665555 3678999999999998 33333 44555555555555 69999999988775544
No 78
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=96.02 E-value=0.0077 Score=55.01 Aligned_cols=46 Identities=20% Similarity=0.138 Sum_probs=40.1
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecC
Q 015439 297 DWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSS 350 (406)
Q Consensus 297 gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgn 350 (406)
|-.|..+++.+++..+++.+ .++++||+.+|.+|++.+ |.+++|..
T Consensus 153 g~~K~~~l~~~~~~~~~~~~---~~~~~gDs~~D~~~~~~a-----~~~~~v~~ 198 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLK---DSYAYGDSISDLPLLSLV-----GHPYVVNP 198 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHH---HcEeeeCCcccHHHHHhC-----CCcEEeCC
Confidence 56788899999999998765 799999999999999997 78888864
No 79
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=95.99 E-value=0.015 Score=55.27 Aligned_cols=34 Identities=18% Similarity=0.101 Sum_probs=26.9
Q ss_pred hhCCccchhHHHHHHHhccCC-EEEEEecCCccCC
Q 015439 97 LKYPSALKYFEKIMSEAKKKK-IAIFSDYDGTLSP 130 (406)
Q Consensus 97 ~~~p~~L~~f~~i~~~~~~k~-~lI~lD~DGTL~~ 130 (406)
.+.|-..=++++|.+-.++|+ ..|.+|+|||++.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~p~av~~DIDeTvld 76 (237)
T PRK11009 42 EQAPVHWVSVAQIEKSLEGRPPMAVGFDIDDTVLF 76 (237)
T ss_pred ccCCeeEEEHHHhhhhccCCCCcEEEEECcCcccc
Confidence 455555557899998778884 4899999999995
No 80
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=95.98 E-value=0.0053 Score=54.75 Aligned_cols=44 Identities=34% Similarity=0.456 Sum_probs=31.0
Q ss_pred EEEEEecCCccCCCC------CCCCc-cCCChhHHHHHHHHHhcC-CEEEEc
Q 015439 118 IAIFSDYDGTLSPIV------DDPDR-AIMSDGMRSAVRNVAKYF-PTAIIT 161 (406)
Q Consensus 118 ~lI~lD~DGTL~~~~------~~p~~-~~~s~~~~~aL~~L~~~~-~v~I~S 161 (406)
++.|||+||||.... .+|++ ..+.+.+.++|++|.+.+ .++|+|
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvT 52 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKKGYKIVIVT 52 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEe
Confidence 368999999998632 23444 346678999999998886 688877
No 81
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.96 E-value=0.046 Score=51.17 Aligned_cols=76 Identities=16% Similarity=0.117 Sum_probs=48.9
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEe-cCCCCCccceEEeC--CHHHHHHHHHH
Q 015439 297 DWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILV-SSVPKETKAFYSLR--DPSEVQEFLLS 373 (406)
Q Consensus 297 gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaV-gna~~~t~A~y~l~--~~~eV~~fL~~ 373 (406)
|--|.+.++-+|+.-+++. -++|+|||.+|.+||+.++.+| |..|+- ||--.-..|+.-+- +-..+.-.|+-
T Consensus 189 gg~ka~i~e~~~ele~~d~----sa~~VGDSItDv~ml~~~rgrG-glAvaFNGNeYal~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 189 GGEKAKIMEGYCELEGIDF----SAVVVGDSITDVKMLEAARGRG-GLAVAFNGNEYALKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred CcchhHHHHHHHhhcCCCc----ceeEecCcccchHHHHHhhccC-ceEEEecCCcccccccceEEeccchhhhhHHHHH
Confidence 4467788888888877764 3899999999999999998663 566654 44211123444332 33345555554
Q ss_pred HHHh
Q 015439 374 LVRW 377 (406)
Q Consensus 374 L~~~ 377 (406)
..+-
T Consensus 264 f~e~ 267 (315)
T COG4030 264 FMER 267 (315)
T ss_pred HHHH
Confidence 4443
No 82
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=95.90 E-value=0.018 Score=51.76 Aligned_cols=53 Identities=13% Similarity=0.096 Sum_probs=41.6
Q ss_pred CCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCC-hhhHHHHh
Q 015439 116 KKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRS-RDKVYELV 172 (406)
Q Consensus 116 k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~-~~~l~~~~ 172 (406)
.-+++++|+||||+.. ....+-+.+.++|+.|.+.+ .++|+|+.+ ...+..++
T Consensus 24 ~v~~vv~D~Dgtl~~~----~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~ 78 (170)
T TIGR01668 24 GIKGVVLDKDNTLVYP----DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVE 78 (170)
T ss_pred CCCEEEEecCCccccC----CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHH
Confidence 4578999999999983 23367789999999999884 899999998 45444443
No 83
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.89 E-value=0.02 Score=55.84 Aligned_cols=58 Identities=19% Similarity=0.094 Sum_probs=45.9
Q ss_pred CCEEEEEecCCccCCCCC----CCC---ccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC
Q 015439 116 KKIAIFSDYDGTLSPIVD----DPD---RAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG 173 (406)
Q Consensus 116 k~~lI~lD~DGTL~~~~~----~p~---~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 173 (406)
+.+++++|+||||..... ++. ...+.+.+.++|++|.+.+ .++|+|||+.......+.
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~ 222 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVE 222 (300)
T ss_pred CCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHH
Confidence 457888999999998543 111 3467889999999999885 899999999988776654
No 84
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=95.82 E-value=0.012 Score=52.01 Aligned_cols=59 Identities=24% Similarity=0.192 Sum_probs=40.5
Q ss_pred cCCEEEEEecCCccCCCC---CCC--CccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC
Q 015439 115 KKKIAIFSDYDGTLSPIV---DDP--DRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG 173 (406)
Q Consensus 115 ~k~~lI~lD~DGTL~~~~---~~p--~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 173 (406)
.+.+|+++|+||||++-. ++. .-....-.-=..|+.|.+.+ .++|+|||.-.-+....+
T Consensus 6 ~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~~Gi~vAIITGr~s~ive~Ra~ 70 (170)
T COG1778 6 KNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLKSGIKVAIITGRDSPIVEKRAK 70 (170)
T ss_pred hhceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHHcCCeEEEEeCCCCHHHHHHHH
Confidence 346899999999999821 110 11112222335788888875 899999999999988764
No 85
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=95.81 E-value=0.017 Score=61.90 Aligned_cols=67 Identities=22% Similarity=0.243 Sum_probs=50.6
Q ss_pred EEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCCC--ccceEEeC--CHHH
Q 015439 291 EIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPKE--TKAFYSLR--DPSE 366 (406)
Q Consensus 291 EI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~~--t~A~y~l~--~~~e 366 (406)
++.|. +|...++.+.+. .+ .++++||+.||.+|++.+ |.||+||++.+. ..|++++. +..+
T Consensus 449 ~~~p~---~K~~~v~~l~~~----~~---~v~~VGDg~nD~~al~~A-----~vgia~g~g~~~a~~~Advvl~~~~l~~ 513 (562)
T TIGR01511 449 EVLPD---DKAALIKELQEK----GR---VVAMVGDGINDAPALAQA-----DVGIAIGAGTDVAIEAADVVLMRNDLND 513 (562)
T ss_pred cCChH---HHHHHHHHHHHc----CC---EEEEEeCCCccHHHHhhC-----CEEEEeCCcCHHHHhhCCEEEeCCCHHH
Confidence 44455 788888887652 22 699999999999999996 899999976532 46899884 6777
Q ss_pred HHHHHH
Q 015439 367 VQEFLL 372 (406)
Q Consensus 367 V~~fL~ 372 (406)
+.++++
T Consensus 514 l~~~i~ 519 (562)
T TIGR01511 514 VATAID 519 (562)
T ss_pred HHHHHH
Confidence 766654
No 86
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=95.76 E-value=0.014 Score=62.09 Aligned_cols=67 Identities=25% Similarity=0.234 Sum_probs=50.6
Q ss_pred EEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEec-CCCCC--ccceEEe--CCHH
Q 015439 291 EIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVS-SVPKE--TKAFYSL--RDPS 365 (406)
Q Consensus 291 EI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVg-na~~~--t~A~y~l--~~~~ 365 (406)
++.|. +|...++.+.+.. + .++++||+.||.+|++.+ |.||+|| ++... ..|++++ ++..
T Consensus 408 ~~~p~---~K~~~i~~l~~~~----~---~v~~vGDg~nD~~al~~A-----~vgia~g~~~~~~~~~~ad~vl~~~~l~ 472 (536)
T TIGR01512 408 ELLPE---DKLEIVKELREKY----G---PVAMVGDGINDAPALAAA-----DVGIAMGASGSDVAIETADVVLLNDDLS 472 (536)
T ss_pred ccCcH---HHHHHHHHHHhcC----C---EEEEEeCCHHHHHHHHhC-----CEEEEeCCCccHHHHHhCCEEEECCCHH
Confidence 44454 7877777765432 2 699999999999999996 8999999 54332 4789988 6888
Q ss_pred HHHHHHH
Q 015439 366 EVQEFLL 372 (406)
Q Consensus 366 eV~~fL~ 372 (406)
++.+++.
T Consensus 473 ~l~~~i~ 479 (536)
T TIGR01512 473 RLPQAIR 479 (536)
T ss_pred HHHHHHH
Confidence 8877654
No 87
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.76 E-value=0.017 Score=55.90 Aligned_cols=67 Identities=21% Similarity=0.187 Sum_probs=48.9
Q ss_pred cchhHHHHHHHhccCCEEEEEecCCccCCCC--------CC-C------------CccCCChhHHHHHHHHHhcC-CEEE
Q 015439 102 ALKYFEKIMSEAKKKKIAIFSDYDGTLSPIV--------DD-P------------DRAIMSDGMRSAVRNVAKYF-PTAI 159 (406)
Q Consensus 102 ~L~~f~~i~~~~~~k~~lI~lD~DGTL~~~~--------~~-p------------~~~~~s~~~~~aL~~L~~~~-~v~I 159 (406)
|-..|+++.+..++++.+|+||+|+|++... .. | ....+-+.+.+.|+.|.+.+ +++|
T Consensus 60 A~~~~~~~~~~~~~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~i 139 (266)
T TIGR01533 60 AKMRLDNNLKKVKDKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFY 139 (266)
T ss_pred HHHHHHHHHhccCCCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEE
Confidence 3446677776557888999999999998532 11 1 13345578899999998885 8999
Q ss_pred EcCCChhhH
Q 015439 160 ITGRSRDKV 168 (406)
Q Consensus 160 ~SGR~~~~l 168 (406)
+|+|+....
T Consensus 140 VTnR~~~~~ 148 (266)
T TIGR01533 140 VSNRSEKEK 148 (266)
T ss_pred EeCCCcchH
Confidence 999985543
No 88
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=95.75 E-value=0.023 Score=64.24 Aligned_cols=61 Identities=25% Similarity=0.275 Sum_probs=45.2
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCCC--ccceEEeCC--HHHHHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPKE--TKAFYSLRD--PSEVQEFL 371 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~~--t~A~y~l~~--~~eV~~fL 371 (406)
+|...++.+- ..| + .+.++||+.||.+|++.+ +.||+|+++... ..|+|++.+ ...+.+.+
T Consensus 618 ~K~~iV~~lq-~~g---~---~va~iGDG~ND~~alk~A-----dVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i 682 (917)
T TIGR01116 618 HKSELVELLQ-EQG---E---IVAMTGDGVNDAPALKKA-----DIGIAMGSGTEVAKEASDMVLADDNFATIVAAV 682 (917)
T ss_pred HHHHHHHHHH-hcC---C---eEEEecCCcchHHHHHhC-----CeeEECCCCcHHHHHhcCeEEccCCHHHHHHHH
Confidence 6877777543 333 2 578899999999999997 799999987543 479999976 55555544
No 89
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=95.71 E-value=0.015 Score=55.04 Aligned_cols=47 Identities=23% Similarity=0.283 Sum_probs=37.3
Q ss_pred EEEecCCccCCCCCCCCccCCChhHHHHHHHHHhc-CCEEEEc---CCChhhHHHHh
Q 015439 120 IFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKY-FPTAIIT---GRSRDKVYELV 172 (406)
Q Consensus 120 I~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~-~~v~I~S---GR~~~~l~~~~ 172 (406)
++||+||||.. .... -+...++|+.+.++ .+++++| ||+...+.+.+
T Consensus 1 ~lfD~DGvL~~-----~~~~-~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l 51 (236)
T TIGR01460 1 FLFDIDGVLWL-----GHKP-IPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKL 51 (236)
T ss_pred CEEeCcCccCc-----CCcc-CcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH
Confidence 47899999998 3333 44889999999988 4899998 99998776544
No 90
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.68 E-value=0.011 Score=48.50 Aligned_cols=45 Identities=22% Similarity=0.210 Sum_probs=33.0
Q ss_pred EEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHH
Q 015439 120 IFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYE 170 (406)
Q Consensus 120 I~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~ 170 (406)
++||+||||.. . ..+-|...++|+.|++.+ +++++|-.+...-.+
T Consensus 1 ~l~D~dGvl~~-----g-~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~ 46 (101)
T PF13344_consen 1 FLFDLDGVLYN-----G-NEPIPGAVEALDALRERGKPVVFLTNNSSRSREE 46 (101)
T ss_dssp EEEESTTTSEE-----T-TEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHH
T ss_pred CEEeCccEeEe-----C-CCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHH
Confidence 68999999997 2 345568899999999985 899998766544333
No 91
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=95.62 E-value=0.013 Score=53.68 Aligned_cols=65 Identities=18% Similarity=0.128 Sum_probs=44.4
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceE-EeCCHHHHHHHHHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPK--ETKAFY-SLRDPSEVQEFLLSLV 375 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~--~t~A~y-~l~~~~eV~~fL~~L~ 375 (406)
.|..+++.+. .... .+++|||+.||.+|.+.+ |.||.++.... ...+.+ .+++..++.++|....
T Consensus 132 ~k~~~l~~~~----~~~~---~~v~iGDs~~D~~~~~aa-----~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 199 (205)
T PRK13582 132 GKRQAVKALK----SLGY---RVIAAGDSYNDTTMLGEA-----DAGILFRPPANVIAEFPQFPAVHTYDELLAAIDKAS 199 (205)
T ss_pred hHHHHHHHHH----HhCC---eEEEEeCCHHHHHHHHhC-----CCCEEECCCHHHHHhCCcccccCCHHHHHHHHHHHH
Confidence 5655555443 2223 699999999999999886 67777754321 124455 7899999988877654
No 92
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=95.52 E-value=0.16 Score=56.32 Aligned_cols=68 Identities=28% Similarity=0.281 Sum_probs=50.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEeC--CH
Q 015439 289 VLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPK--ETKAFYSLR--DP 364 (406)
Q Consensus 289 ~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~--~t~A~y~l~--~~ 364 (406)
+-++.|. +|-.-++.|-+ .|. .|.++||+.||.++++.+ ..||+|+++.+ +..|+.++- +-
T Consensus 515 fAr~~Pe---~K~~iV~~lq~-~G~------~VamvGDGvNDapAL~~A-----dVGIAm~~gtdvAkeaADivLl~d~l 579 (755)
T TIGR01647 515 FAEVFPE---HKYEIVEILQK-RGH------LVGMTGDGVNDAPALKKA-----DVGIAVAGATDAARSAADIVLTEPGL 579 (755)
T ss_pred EEecCHH---HHHHHHHHHHh-cCC------EEEEEcCCcccHHHHHhC-----CeeEEecCCcHHHHHhCCEEEEcCCh
Confidence 4567788 89998888654 342 599999999999999997 69999998654 357888884 33
Q ss_pred HHHHHHH
Q 015439 365 SEVQEFL 371 (406)
Q Consensus 365 ~eV~~fL 371 (406)
..+...+
T Consensus 580 ~~I~~ai 586 (755)
T TIGR01647 580 SVIVDAI 586 (755)
T ss_pred HHHHHHH
Confidence 4444433
No 93
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=95.48 E-value=0.061 Score=61.86 Aligned_cols=60 Identities=18% Similarity=0.292 Sum_probs=45.7
Q ss_pred EEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCC---CCccceEEeCC
Q 015439 290 LEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVP---KETKAFYSLRD 363 (406)
Q Consensus 290 lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~---~~t~A~y~l~~ 363 (406)
-.+.|. .|+.-++.+-+..|. .++++||+.||.+|++.+ ..||.+.... ....|+|++.+
T Consensus 749 aR~sP~---qK~~IV~~lk~~~~~------~vl~iGDG~ND~~mlk~A-----dVGIgi~g~eg~qA~~aaD~~i~~ 811 (1057)
T TIGR01652 749 CRVSPS---QKADVVRLVKKSTGK------TTLAIGDGANDVSMIQEA-----DVGVGISGKEGMQAVMASDFAIGQ 811 (1057)
T ss_pred eCCCHH---HHHHHHHHHHhcCCC------eEEEEeCCCccHHHHhhc-----CeeeEecChHHHHHHHhhhhhhhh
Confidence 456788 999999888766442 599999999999999997 4777764322 12468888876
No 94
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=95.47 E-value=0.021 Score=53.02 Aligned_cols=65 Identities=18% Similarity=0.127 Sum_probs=45.2
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCCC-ccceE--EeCCHHHHHHHHHH
Q 015439 297 DWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPKE-TKAFY--SLRDPSEVQEFLLS 373 (406)
Q Consensus 297 gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~~-t~A~y--~l~~~~eV~~fL~~ 373 (406)
+..|...++.+ +..|. .++++||+.||.+|++.+ |++|++...+.- ..|.- ++.+.+|+.+.|..
T Consensus 130 ~~~K~~~l~~l-~~~~~------~~v~vGDs~nDl~ml~~A-----g~~ia~~ak~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (203)
T TIGR02137 130 KDPKRQSVIAF-KSLYY------RVIAAGDSYNDTTMLSEA-----HAGILFHAPENVIREFPQFPAVHTYEDLKREFLK 197 (203)
T ss_pred cchHHHHHHHH-HhhCC------CEEEEeCCHHHHHHHHhC-----CCCEEecCCHHHHHhCCCCCcccCHHHHHHHHHH
Confidence 44899999988 45553 599999999999999997 899999743211 12221 23566777665543
No 95
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=95.46 E-value=0.028 Score=49.26 Aligned_cols=58 Identities=17% Similarity=0.182 Sum_probs=43.9
Q ss_pred CCEEEEEecCCccCCCCC--CCCc-------------------cCCChhHHHHHHHHHhcCCEEEEcCCChhhHHHHhC
Q 015439 116 KKIAIFSDYDGTLSPIVD--DPDR-------------------AIMSDGMRSAVRNVAKYFPTAIITGRSRDKVYELVG 173 (406)
Q Consensus 116 k~~lI~lD~DGTL~~~~~--~p~~-------------------~~~s~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~ 173 (406)
++.++++|+||||+.... .+.. ..+-|.+.+.|+.|.+...++|+|+.+...+..+++
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~ 79 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLD 79 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHH
Confidence 467889999999998421 1110 123578999999998667999999999999888764
No 96
>PLN02954 phosphoserine phosphatase
Probab=95.45 E-value=0.034 Score=51.61 Aligned_cols=67 Identities=27% Similarity=0.240 Sum_probs=48.0
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCC-C---CccceEEeCCHHHHHHHH
Q 015439 297 DWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVP-K---ETKAFYSLRDPSEVQEFL 371 (406)
Q Consensus 297 gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~-~---~t~A~y~l~~~~eV~~fL 371 (406)
+-.|..+++.+++.+|.. .+++|||+.||..|.+... ..+.++.+... . ...|+|++.+..++.++|
T Consensus 153 ~~~K~~~i~~~~~~~~~~-----~~i~iGDs~~Di~aa~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 153 SGGKAEAVQHIKKKHGYK-----TMVMIGDGATDLEARKPGG---ADLFIGYGGVQVREAVAAKADWFVTDFQDLIEVL 223 (224)
T ss_pred CccHHHHHHHHHHHcCCC-----ceEEEeCCHHHHHhhhcCC---CCEEEecCCCccCHHHHhcCCEEECCHHHHHHhh
Confidence 457999999999998863 5999999999999955421 13344444322 1 135899999999988765
No 97
>PRK06769 hypothetical protein; Validated
Probab=95.44 E-value=0.014 Score=52.69 Aligned_cols=49 Identities=18% Similarity=0.187 Sum_probs=37.3
Q ss_pred CCEEEEEecCCccCCCCC--CCCccCCChhHHHHHHHHHhcC-CEEEEcCCC
Q 015439 116 KKIAIFSDYDGTLSPIVD--DPDRAIMSDGMRSAVRNVAKYF-PTAIITGRS 164 (406)
Q Consensus 116 k~~lI~lD~DGTL~~~~~--~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~ 164 (406)
..++|++|.||||.++.. .++.-.+-|.++++|++|.+.+ +++|+|+.+
T Consensus 3 ~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~ 54 (173)
T PRK06769 3 NIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQP 54 (173)
T ss_pred CCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCc
Confidence 357899999999977532 1223445689999999999885 899999764
No 98
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=95.40 E-value=0.018 Score=62.64 Aligned_cols=68 Identities=21% Similarity=0.207 Sum_probs=51.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEeC--CH
Q 015439 289 VLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPK--ETKAFYSLR--DP 364 (406)
Q Consensus 289 ~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~--~t~A~y~l~--~~ 364 (406)
+-++.|. +|...++.+.+.-+ .+.++||+.||.++++.+ +.||+|+++.+ +..|++++- ++
T Consensus 489 ~a~~~Pe---dK~~~v~~lq~~g~-------~VamvGDG~NDapAL~~A-----dvGiAm~~gt~~akeaadivLldd~~ 553 (675)
T TIGR01497 489 IAEATPE---DKIALIRQEQAEGK-------LVAMTGDGTNDAPALAQA-----DVGVAMNSGTQAAKEAANMVDLDSDP 553 (675)
T ss_pred EcCCCHH---HHHHHHHHHHHcCC-------eEEEECCCcchHHHHHhC-----CEeEEeCCCCHHHHHhCCEEECCCCH
Confidence 3455666 89999999876421 599999999999999996 89999998654 357888873 55
Q ss_pred HHHHHHH
Q 015439 365 SEVQEFL 371 (406)
Q Consensus 365 ~eV~~fL 371 (406)
..+.+.+
T Consensus 554 s~Iv~av 560 (675)
T TIGR01497 554 TKLIEVV 560 (675)
T ss_pred HHHHHHH
Confidence 6555544
No 99
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.31 E-value=0.016 Score=52.34 Aligned_cols=64 Identities=20% Similarity=0.183 Sum_probs=45.8
Q ss_pred HHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCc-eEEEecCCC--C---Cccc--eEEeCCHHHHHHHHH
Q 015439 301 GKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRG-YGILVSSVP--K---ETKA--FYSLRDPSEVQEFLL 372 (406)
Q Consensus 301 G~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G-~gVaVgna~--~---~t~A--~y~l~~~~eV~~fL~ 372 (406)
-..+..+++.+|++++ ++++|||+.+|+.+-+.+ | ..|.+.... . ...+ ++++.+..++.++|.
T Consensus 106 p~~~~~~~~~l~~~~~---~~~~VgDs~~Di~~A~~a-----G~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l~ 177 (181)
T PRK08942 106 PGMLLSIAERLNIDLA---GSPMVGDSLRDLQAAAAA-----GVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQALK 177 (181)
T ss_pred HHHHHHHHHHcCCChh---hEEEEeCCHHHHHHHHHC-----CCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHHH
Confidence 4567788889998875 799999999999887776 4 345554322 1 1235 788888888877654
No 100
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.27 E-value=0.062 Score=48.00 Aligned_cols=64 Identities=13% Similarity=0.165 Sum_probs=50.5
Q ss_pred hccCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhCCcCceEE
Q 015439 113 AKKKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVGLTELYYA 180 (406)
Q Consensus 113 ~~~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~l~~~~li 180 (406)
.+-..+-|++|+|.||++. +....+|++++=+.++.+.+ .++|+|--....+..+..-.++.+|
T Consensus 24 ~~~Gikgvi~DlDNTLv~w----d~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~fi 88 (175)
T COG2179 24 KAHGIKGVILDLDNTLVPW----DNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPFI 88 (175)
T ss_pred HHcCCcEEEEeccCceecc----cCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCcee
Confidence 3444667889999999997 34567999999999999995 8999999999999888753333333
No 101
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=95.21 E-value=0.017 Score=51.53 Aligned_cols=35 Identities=29% Similarity=0.216 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHH
Q 015439 300 KGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~ 337 (406)
|-..++.+++.++++++ ++++|||+.+|+++-+.+
T Consensus 105 ~~~~~~~~~~~~~~~~~---e~l~IGD~~~Di~~A~~a 139 (161)
T TIGR01261 105 KIKLLEPYLKKNLIDKA---RSYVIGDRETDMQLAENL 139 (161)
T ss_pred CHHHHHHHHHHcCCCHH---HeEEEeCCHHHHHHHHHC
Confidence 45678888899998775 799999999999987775
No 102
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=95.19 E-value=0.037 Score=58.60 Aligned_cols=74 Identities=16% Similarity=0.109 Sum_probs=49.7
Q ss_pred hhhHHhhCCccchhHHHHH----HHhccCCEEEEEecCCccCCCC------CCCCccC-CChhHHHHHHHHHhcC-CEEE
Q 015439 92 YCSWMLKYPSALKYFEKIM----SEAKKKKIAIFSDYDGTLSPIV------DDPDRAI-MSDGMRSAVRNVAKYF-PTAI 159 (406)
Q Consensus 92 ~~~w~~~~p~~L~~f~~i~----~~~~~k~~lI~lD~DGTL~~~~------~~p~~~~-~s~~~~~aL~~L~~~~-~v~I 159 (406)
...|...-+..-..|+.++ .-.+.+.+++|||+||||.... .+|++-. +-+.+.++|++|.+.+ .++|
T Consensus 139 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvI 218 (526)
T TIGR01663 139 PEKRDRKGNPGWENLEKLLIFTAAGVKGQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICI 218 (526)
T ss_pred hhhhcccCCccccccCceEEEecCCcCccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEE
Confidence 4567766554444444433 1235667899999999999632 1222222 4688999999999985 8999
Q ss_pred EcCCCh
Q 015439 160 ITGRSR 165 (406)
Q Consensus 160 ~SGR~~ 165 (406)
+|..+.
T Consensus 219 vTNQ~g 224 (526)
T TIGR01663 219 FTNQGG 224 (526)
T ss_pred EECCcc
Confidence 998655
No 103
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=95.10 E-value=0.025 Score=50.97 Aligned_cols=58 Identities=16% Similarity=0.067 Sum_probs=44.6
Q ss_pred CEEEEEecCCccCCC---CC-C-CCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhCC
Q 015439 117 KIAIFSDYDGTLSPI---VD-D-PDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVGL 174 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~---~~-~-p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~l 174 (406)
-++++||+||+|++. .. + ......+..--.+++.|++.+ +++|+|+++...+..++..
T Consensus 7 i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~ 70 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVLQLCGIDVAIITSKKSGAVRHRAEE 70 (169)
T ss_pred CeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHHHHCCCEEEEEECCCcHHHHHHHHH
Confidence 579999999999983 11 1 012345666778999999885 8999999999998888753
No 104
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=95.05 E-value=0.035 Score=50.77 Aligned_cols=33 Identities=12% Similarity=0.079 Sum_probs=26.7
Q ss_pred ChhHHHHHHHHHhcCCEEEEcCCChhhHHHHhC
Q 015439 141 SDGMRSAVRNVAKYFPTAIITGRSRDKVYELVG 173 (406)
Q Consensus 141 s~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~ 173 (406)
-|.+.+.|+.|.+..+++|+|+.....+..++.
T Consensus 70 ~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~ 102 (205)
T PRK13582 70 LPGAVEFLDWLRERFQVVILSDTFYEFAGPLMR 102 (205)
T ss_pred CCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHH
Confidence 355778888887777899999999998888753
No 105
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=95.03 E-value=0.036 Score=53.67 Aligned_cols=68 Identities=21% Similarity=0.219 Sum_probs=52.1
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCce-EEEecCC--CC----CccceEEeCCHHHHHH
Q 015439 297 DWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGY-GILVSSV--PK----ETKAFYSLRDPSEVQE 369 (406)
Q Consensus 297 gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~-gVaVgna--~~----~t~A~y~l~~~~eV~~ 369 (406)
+-.+...++.+++++|++++ .+++|||+.+|+++-+.+ |+ +|.|..+ .. ...++|+++++.++.+
T Consensus 156 ~Kp~p~~~~~~~~~~g~~~~---~~l~IGD~~~Di~aA~~a-----Gi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~ 227 (272)
T PRK13223 156 KKPDPAALLFVMKMAGVPPS---QSLFVGDSRSDVLAAKAA-----GVQCVALSYGYNHGRPIAEESPALVIDDLRALLP 227 (272)
T ss_pred CCCCcHHHHHHHHHhCCChh---HEEEECCCHHHHHHHHHC-----CCeEEEEecCCCCchhhhhcCCCEEECCHHHHHH
Confidence 44677899999999999876 799999999999998886 44 4555443 11 2468999999998876
Q ss_pred HHH
Q 015439 370 FLL 372 (406)
Q Consensus 370 fL~ 372 (406)
++.
T Consensus 228 ~~~ 230 (272)
T PRK13223 228 GCA 230 (272)
T ss_pred HHh
Confidence 544
No 106
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=95.01 E-value=0.062 Score=52.16 Aligned_cols=70 Identities=20% Similarity=0.309 Sum_probs=54.2
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCC--CC----CccceEEeCCHHHHHHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSV--PK----ETKAFYSLRDPSEVQEFLL 372 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna--~~----~t~A~y~l~~~~eV~~fL~ 372 (406)
.|..++..++++++++++ .+++|||+.+|+.+-+.+. -.+|.+... .. ...|+|+++++.++..++.
T Consensus 196 ~k~~~~~~~l~~~~~~p~---~~l~IGDs~~Di~aA~~AG----~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~~ 268 (273)
T PRK13225 196 SKRRALSQLVAREGWQPA---AVMYVGDETRDVEAARQVG----LIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAVT 268 (273)
T ss_pred CCHHHHHHHHHHhCcChh---HEEEECCCHHHHHHHHHCC----CeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHHH
Confidence 467899999999999875 7999999999998877752 234455433 22 2358999999999999988
Q ss_pred HHH
Q 015439 373 SLV 375 (406)
Q Consensus 373 ~L~ 375 (406)
.|.
T Consensus 269 ~~~ 271 (273)
T PRK13225 269 QLM 271 (273)
T ss_pred HHh
Confidence 775
No 107
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=94.96 E-value=0.038 Score=52.38 Aligned_cols=45 Identities=11% Similarity=0.098 Sum_probs=36.4
Q ss_pred CEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhh
Q 015439 117 KIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDK 167 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~ 167 (406)
.++++||+||||.. ...+-|.+.++|++|.+.+ +++|+|..++..
T Consensus 8 ~~~~~~D~dG~l~~------~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~ 53 (242)
T TIGR01459 8 YDVFLLDLWGVIID------GNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNI 53 (242)
T ss_pred CCEEEEeccccccc------CCccCccHHHHHHHHHHCCCEEEEEeCCCCCh
Confidence 45788999999997 2345789999999999885 899988766654
No 108
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=94.92 E-value=0.029 Score=53.24 Aligned_cols=79 Identities=35% Similarity=0.443 Sum_probs=51.7
Q ss_pred EEcCCCCCHHHHHHHHHHHc---CCCCCCCccEEEEeCCcCCHHHHHHHHhC-----CCceEEE--ecCCCCCccceEEe
Q 015439 292 IRPVIDWNKGKAVEFLLESL---GLSDSDDVLPIYIGDDRTDEDAFKVLRKG-----NRGYGIL--VSSVPKETKAFYSL 361 (406)
Q Consensus 292 I~P~~gvsKG~Al~~Ll~~l---g~~~~~~~~viaiGD~~NDedMf~~~~~~-----~~G~gVa--Vgna~~~t~A~y~l 361 (406)
--|+ +.-||..++.+++.. |... ..++||||+.||.-.-..++.. ..||+.. +.+-+....|..+.
T Consensus 144 ~C~~-NmCK~~il~~~~~~~~~~g~~~---~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~l~~~i~~~~~~~~a~v~~ 219 (234)
T PF06888_consen 144 LCPP-NMCKGKILERLLQEQAQRGVPY---DRVIYIGDGRNDFCPALRLRPRDVVFPRKGYPLHKLIQKNPGEVKAEVVP 219 (234)
T ss_pred cCCC-ccchHHHHHHHHHHHhhcCCCc---ceEEEECCCCCCcCcccccCCCCEEecCCCChHHHHHhcCCCcceeEEEe
Confidence 3466 889999999999984 4333 3799999999999877666431 1233321 22111223555444
Q ss_pred -CCHHHHHHHHHHH
Q 015439 362 -RDPSEVQEFLLSL 374 (406)
Q Consensus 362 -~~~~eV~~fL~~L 374 (406)
.+-.++.+.|..|
T Consensus 220 W~~g~~i~~~l~~~ 233 (234)
T PF06888_consen 220 WSSGEEILEILLQL 233 (234)
T ss_pred cCCHHHHHHHHHhh
Confidence 6888898888776
No 109
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=94.85 E-value=0.057 Score=48.61 Aligned_cols=47 Identities=26% Similarity=0.314 Sum_probs=37.6
Q ss_pred HhccCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-C--EEEEcC
Q 015439 112 EAKKKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-P--TAIITG 162 (406)
Q Consensus 112 ~~~~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~--v~I~SG 162 (406)
..+...+.++||.|.||++ |....++++..+.++++.+.+ . |+|+|-
T Consensus 36 Lk~~Gik~li~DkDNTL~~----~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSN 85 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTP----PYEDEIPPEYAEWLNELKKQFGKDRVLIVSN 85 (168)
T ss_pred hhhcCceEEEEcCCCCCCC----CCcCcCCHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 3456678999999999998 466789999999999999774 2 666653
No 110
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=94.83 E-value=0.053 Score=50.06 Aligned_cols=68 Identities=22% Similarity=0.163 Sum_probs=52.6
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCce-EEEecCCC--C----CccceEEeCCHHHHHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGY-GILVSSVP--K----ETKAFYSLRDPSEVQEFL 371 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~-gVaVgna~--~----~t~A~y~l~~~~eV~~fL 371 (406)
-|...+++++++++++++ .+++|||+.+|+.+-+.+ |. .|.+..+. . +..|+|++++..++.+++
T Consensus 139 p~p~~~~~~~~~~~~~~~---~~~~iGDs~~Di~aa~~a-----G~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i 210 (214)
T PRK13288 139 PDPEPVLKALELLGAKPE---EALMVGDNHHDILAGKNA-----GTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIV 210 (214)
T ss_pred CCcHHHHHHHHHcCCCHH---HEEEECCCHHHHHHHHHC-----CCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHH
Confidence 567899999999998875 799999999999998886 43 44554332 1 135889999999998887
Q ss_pred HHH
Q 015439 372 LSL 374 (406)
Q Consensus 372 ~~L 374 (406)
.++
T Consensus 211 ~~~ 213 (214)
T PRK13288 211 GDM 213 (214)
T ss_pred hhc
Confidence 653
No 111
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=94.74 E-value=0.037 Score=55.71 Aligned_cols=48 Identities=25% Similarity=0.301 Sum_probs=39.0
Q ss_pred CCEEEEEecCCccCCCC------CCCCccCCChhHHHHHHHHHhcC-CEEEEcCC
Q 015439 116 KKIAIFSDYDGTLSPIV------DDPDRAIMSDGMRSAVRNVAKYF-PTAIITGR 163 (406)
Q Consensus 116 k~~lI~lD~DGTL~~~~------~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR 163 (406)
+++++|+|.||||.... ..++...+-|.+.++|..|.+.+ +++|+|..
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 47889999999999842 23345677889999999998874 89999984
No 112
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=94.60 E-value=0.067 Score=49.81 Aligned_cols=69 Identities=20% Similarity=0.131 Sum_probs=47.4
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCC----CCCccceEEeCCHHHHHHHHH
Q 015439 297 DWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSV----PKETKAFYSLRDPSEVQEFLL 372 (406)
Q Consensus 297 gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna----~~~t~A~y~l~~~~eV~~fL~ 372 (406)
|..|..+++. ++.... .+++|||+.+|+.|.+.+ |..++-+.. .....+.+...+-.+|.+.|+
T Consensus 146 ~~~K~~~l~~----~~~~~~---~~i~iGDs~~Di~aa~~A-----g~~~a~~~l~~~~~~~~~~~~~~~~f~ei~~~l~ 213 (219)
T PRK09552 146 GCCKPSLIRK----LSDTND---FHIVIGDSITDLEAAKQA-----DKVFARDFLITKCEELGIPYTPFETFHDVQTELK 213 (219)
T ss_pred CCchHHHHHH----hccCCC---CEEEEeCCHHHHHHHHHC-----CcceeHHHHHHHHHHcCCCccccCCHHHHHHHHH
Confidence 3458876654 455543 699999999999998875 665542210 022457777789999999998
Q ss_pred HHHHh
Q 015439 373 SLVRW 377 (406)
Q Consensus 373 ~L~~~ 377 (406)
.+.+.
T Consensus 214 ~~~~~ 218 (219)
T PRK09552 214 HLLEV 218 (219)
T ss_pred HHhcc
Confidence 87653
No 113
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=94.58 E-value=0.037 Score=61.17 Aligned_cols=67 Identities=24% Similarity=0.221 Sum_probs=49.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCCC--ccceEEe--CCH
Q 015439 289 VLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPKE--TKAFYSL--RDP 364 (406)
Q Consensus 289 ~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~~--t~A~y~l--~~~ 364 (406)
+.++.|. +|...++.+.+. . .++++||+.||.+|++.+ +.||+||++... ..|++++ ++.
T Consensus 610 ~~~~~p~---~K~~~v~~l~~~-----~---~v~mvGDgiNDapAl~~A-----~vgia~g~~~~~a~~~adivl~~~~l 673 (741)
T PRK11033 610 RAGLLPE---DKVKAVTELNQH-----A---PLAMVGDGINDAPAMKAA-----SIGIAMGSGTDVALETADAALTHNRL 673 (741)
T ss_pred ecCCCHH---HHHHHHHHHhcC-----C---CEEEEECCHHhHHHHHhC-----CeeEEecCCCHHHHHhCCEEEecCCH
Confidence 3445566 799988887531 2 599999999999999996 799999987642 4578877 355
Q ss_pred HHHHHHH
Q 015439 365 SEVQEFL 371 (406)
Q Consensus 365 ~eV~~fL 371 (406)
.++..++
T Consensus 674 ~~l~~~i 680 (741)
T PRK11033 674 RGLAQMI 680 (741)
T ss_pred HHHHHHH
Confidence 6666444
No 114
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=94.50 E-value=0.11 Score=49.22 Aligned_cols=54 Identities=17% Similarity=0.063 Sum_probs=41.2
Q ss_pred ccCCEEEEEecCCccCCCC---------C---C---------CCccCCChhHHHHHHHHHhcC-CEEEEcCCChhh
Q 015439 114 KKKKIAIFSDYDGTLSPIV---------D---D---------PDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDK 167 (406)
Q Consensus 114 ~~k~~lI~lD~DGTL~~~~---------~---~---------p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~ 167 (406)
..++-+++||+|.|++... . + ...+..-+.++++++.|.+.+ .|+++|||+...
T Consensus 74 ~dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 74 GDGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 3466788999999999721 0 0 124556688999999999985 899999999765
No 115
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=94.47 E-value=0.051 Score=46.63 Aligned_cols=49 Identities=22% Similarity=0.340 Sum_probs=38.8
Q ss_pred cEEEEeCCcCCHHHHHHHHhCCCceEEEe-cC--CCCC--ccceEEeCCHHHHHHHHHH
Q 015439 320 LPIYIGDDRTDEDAFKVLRKGNRGYGILV-SS--VPKE--TKAFYSLRDPSEVQEFLLS 373 (406)
Q Consensus 320 ~viaiGD~~NDedMf~~~~~~~~G~gVaV-gn--a~~~--t~A~y~l~~~~eV~~fL~~ 373 (406)
.++++||+-||+.|++.+ ..||.+ ++ ++.+ ..|++++.+..++.+.+..
T Consensus 95 k~vmVGnGaND~laLr~A-----DlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~ 148 (152)
T COG4087 95 KVVMVGNGANDILALREA-----DLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKD 148 (152)
T ss_pred EEEEecCCcchHHHhhhc-----ccceEEeccCCcchHHHhhchhhhhhHHHHHHHhhc
Confidence 799999999999999997 578754 33 3333 4699999999998887654
No 116
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=94.46 E-value=0.055 Score=59.24 Aligned_cols=69 Identities=26% Similarity=0.193 Sum_probs=54.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEe--CCH
Q 015439 289 VLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPK--ETKAFYSL--RDP 364 (406)
Q Consensus 289 ~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~--~t~A~y~l--~~~ 364 (406)
+=|+.|. +|...++.|-+.- . .++++||+.||-+++..+ ..||+||.+.+ ...|+.++ ++.
T Consensus 580 ~AellPe---dK~~~V~~l~~~g----~---~VamVGDGINDAPALA~A-----dVGiAmG~GtDvA~eaADvvL~~~dL 644 (713)
T COG2217 580 RAELLPE---DKAEIVRELQAEG----R---KVAMVGDGINDAPALAAA-----DVGIAMGSGTDVAIEAADVVLMRDDL 644 (713)
T ss_pred eccCCcH---HHHHHHHHHHhcC----C---EEEEEeCCchhHHHHhhc-----CeeEeecCCcHHHHHhCCEEEecCCH
Confidence 5578888 8999999887432 1 699999999999999997 69999998654 25688887 467
Q ss_pred HHHHHHHH
Q 015439 365 SEVQEFLL 372 (406)
Q Consensus 365 ~eV~~fL~ 372 (406)
..|.+.++
T Consensus 645 ~~v~~ai~ 652 (713)
T COG2217 645 SAVPEAID 652 (713)
T ss_pred HHHHHHHH
Confidence 77777654
No 117
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=94.45 E-value=0.069 Score=48.94 Aligned_cols=63 Identities=19% Similarity=0.256 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCce-EEEec--CCCC----CccceEEeCCHHHHHHH
Q 015439 300 KGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGY-GILVS--SVPK----ETKAFYSLRDPSEVQEF 370 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~-gVaVg--na~~----~t~A~y~l~~~~eV~~f 370 (406)
+...+..+++.+|++++ .+++|||+.+|+.+-+.+ |+ .|.|. .... ...|+|++++..++..+
T Consensus 143 ~p~~~~~~~~~~~~~~~---~~~~igDs~~d~~aa~~a-----G~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~~ 212 (213)
T TIGR01449 143 HPDPLLLAAERLGVAPQ---QMVYVGDSRVDIQAARAA-----GCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPPL 212 (213)
T ss_pred ChHHHHHHHHHcCCChh---HeEEeCCCHHHHHHHHHC-----CCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHhh
Confidence 46789999999999876 799999999999999886 43 44452 2111 24689999999988764
No 118
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=94.45 E-value=0.09 Score=48.17 Aligned_cols=66 Identities=17% Similarity=0.194 Sum_probs=50.1
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceE-EEec--CCCC----CccceEEeCCHHHHHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYG-ILVS--SVPK----ETKAFYSLRDPSEVQEFL 371 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~g-VaVg--na~~----~t~A~y~l~~~~eV~~fL 371 (406)
-|...+..+++.+|++++ .+++|||+.+|+.+-+.+ |.. |.+. .... +..|+|+++++.++..++
T Consensus 132 P~~~~~~~~~~~~~~~~~---~~l~igD~~~Di~aA~~~-----Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~ 203 (205)
T TIGR01454 132 PAPDIVREALRLLDVPPE---DAVMVGDAVTDLASARAA-----GTATVAALWGEGDAGELLAARPDFLLRKPQSLLALC 203 (205)
T ss_pred CChHHHHHHHHHcCCChh---heEEEcCCHHHHHHHHHc-----CCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHh
Confidence 457888999999999876 799999999999887776 443 3332 2121 346899999999998876
Q ss_pred H
Q 015439 372 L 372 (406)
Q Consensus 372 ~ 372 (406)
+
T Consensus 204 ~ 204 (205)
T TIGR01454 204 R 204 (205)
T ss_pred h
Confidence 5
No 119
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=94.44 E-value=0.074 Score=49.15 Aligned_cols=33 Identities=15% Similarity=0.181 Sum_probs=23.3
Q ss_pred CChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHh
Q 015439 140 MSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELV 172 (406)
Q Consensus 140 ~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~ 172 (406)
+.+.+.+.|+.|.+.+ +++|+||.....+..++
T Consensus 86 ~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l 119 (219)
T TIGR00338 86 LTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVK 119 (219)
T ss_pred cCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHH
Confidence 4456667777777764 78888888777666655
No 120
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=94.38 E-value=0.013 Score=61.23 Aligned_cols=71 Identities=13% Similarity=0.041 Sum_probs=55.9
Q ss_pred ccc--CCCccCCCCCCC---CCceeecCCCCCCCcchhhhccHHHHHhcCCchhhhhccccCCCCCcccchhhhhhHHhh
Q 015439 24 GIH--SRLPYSQPGASF---SGKCIAIPRKKPGKLDDVRSNGWLDAMKSSSPPRKKLIKDFNADVGLDDFDIAYCSWMLK 98 (406)
Q Consensus 24 ~~~--~~~~~s~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 98 (406)
|.| +.++.|+++|+. .++++++| |+.++. +.+|..++.|++++++.++... ..++..++...|+.+
T Consensus 384 g~p~~g~vV~S~~~G~~~~~~~g~lv~p----~d~~~l--a~ai~~~l~~~~~e~~~~~~~~---~~~v~~~~~~~w~~~ 454 (460)
T cd03788 384 QDDDPGVLILSEFAGAAEELSGALLVNP----YDIDEV--ADAIHRALTMPLEERRERHRKL---REYVRTHDVQAWANS 454 (460)
T ss_pred ecCCCceEEEeccccchhhcCCCEEECC----CCHHHH--HHHHHHHHcCCHHHHHHHHHHH---HHHHHhCCHHHHHHH
Confidence 555 238999999875 37899999 788888 9999999999998887776532 556778889999988
Q ss_pred CCccc
Q 015439 99 YPSAL 103 (406)
Q Consensus 99 ~p~~L 103 (406)
+...|
T Consensus 455 ~l~~l 459 (460)
T cd03788 455 FLDDL 459 (460)
T ss_pred HHHhh
Confidence 76554
No 121
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=94.29 E-value=0.067 Score=47.58 Aligned_cols=51 Identities=20% Similarity=0.188 Sum_probs=37.7
Q ss_pred EEEEecCCccCCCC------CCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHH
Q 015439 119 AIFSDYDGTLSPIV------DDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVY 169 (406)
Q Consensus 119 lI~lD~DGTL~~~~------~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~ 169 (406)
+|++|+||||+... .--......+...+.++++++++ .++-+|+|+.....
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~ 58 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNGYKILYLTARPIGQAN 58 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHH
Confidence 47899999999731 00012246678889999999996 79999999986543
No 122
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=94.26 E-value=0.095 Score=48.95 Aligned_cols=68 Identities=22% Similarity=0.238 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCC-C---CccceEEeCCHHHHHHHHH
Q 015439 300 KGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVP-K---ETKAFYSLRDPSEVQEFLL 372 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~-~---~t~A~y~l~~~~eV~~fL~ 372 (406)
.-..+..+++.+|++++ .+++|||+.+|+.|=+.++- ...+|..|... . ...|++++.++.++..+|.
T Consensus 147 ~P~~l~~~~~~~~~~~~---~~l~VGDs~~Di~aA~~Ag~--~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 147 DPEPLLLLLEKLGLDPE---EALMVGDSLNDILAAKAAGV--PAVGVTWGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred CHHHHHHHHHHhCCChh---heEEECCCHHHHHHHHHcCC--CEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 35788899999999853 79999999999999888731 12455555422 1 2469999999999988775
No 123
>PLN02954 phosphoserine phosphatase
Probab=94.24 E-value=0.081 Score=49.10 Aligned_cols=34 Identities=15% Similarity=0.261 Sum_probs=26.3
Q ss_pred CChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC
Q 015439 140 MSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG 173 (406)
Q Consensus 140 ~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 173 (406)
+-|.+.+.|+.|.+.+ +++|+||.....+..++.
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~ 119 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAA 119 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHH
Confidence 3467777888887774 799999999888877653
No 124
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=94.14 E-value=0.088 Score=49.41 Aligned_cols=64 Identities=17% Similarity=0.140 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCce-EEEecCCC---C----CccceEEeCCHHHHHHHH
Q 015439 300 KGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGY-GILVSSVP---K----ETKAFYSLRDPSEVQEFL 371 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~-gVaVgna~---~----~t~A~y~l~~~~eV~~fL 371 (406)
+...+..+++.+|++++ .+++|||+.+|+.+-+.+ |+ .|++.-+. . ...|+|+++++.++.+.|
T Consensus 153 ~p~~~~~~~~~l~~~p~---~~l~IGDs~~Di~aA~~a-----G~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~~ 224 (229)
T PRK13226 153 HPLPLLVAAERIGVAPT---DCVYVGDDERDILAARAA-----GMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNPA 224 (229)
T ss_pred CHHHHHHHHHHhCCChh---hEEEeCCCHHHHHHHHHC-----CCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHHh
Confidence 45678999999999876 799999999999998886 43 34443221 1 125899999999987754
No 125
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=94.12 E-value=0.057 Score=47.57 Aligned_cols=56 Identities=18% Similarity=0.253 Sum_probs=40.4
Q ss_pred EEEEEecCCccCCCCCCCCc--------------cCCChhHHHHHHHHHhcCCEEEEcCCChhhHHHHhC
Q 015439 118 IAIFSDYDGTLSPIVDDPDR--------------AIMSDGMRSAVRNVAKYFPTAIITGRSRDKVYELVG 173 (406)
Q Consensus 118 ~lI~lD~DGTL~~~~~~p~~--------------~~~s~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~ 173 (406)
+++++|+||||+.....+.. -..-|.+.+-|+.+++.+.++|.|..+...+..++.
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~ 70 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLD 70 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHH
Confidence 57899999999975432211 125688999999998889999999999998888774
No 126
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=93.98 E-value=0.11 Score=47.09 Aligned_cols=58 Identities=19% Similarity=0.173 Sum_probs=43.5
Q ss_pred CEEEEEecCCccCCCCC-----------CC----------CccCCChhHHHHHHHHHhcC-CEEEEcCC-ChhhHHHHhC
Q 015439 117 KIAIFSDYDGTLSPIVD-----------DP----------DRAIMSDGMRSAVRNVAKYF-PTAIITGR-SRDKVYELVG 173 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~~~-----------~p----------~~~~~s~~~~~aL~~L~~~~-~v~I~SGR-~~~~l~~~~~ 173 (406)
.+|++||+|+||-.+.. ++ ....+-+.+.+.|+.|.+.+ +++|+|+. ....+..+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~ 81 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILG 81 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHH
Confidence 47899999999986321 11 12345688999999999885 89999988 7777777665
Q ss_pred C
Q 015439 174 L 174 (406)
Q Consensus 174 l 174 (406)
.
T Consensus 82 ~ 82 (174)
T TIGR01685 82 T 82 (174)
T ss_pred h
Confidence 3
No 127
>PLN03190 aminophospholipid translocase; Provisional
Probab=93.90 E-value=0.61 Score=54.25 Aligned_cols=69 Identities=17% Similarity=0.332 Sum_probs=47.3
Q ss_pred EEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCC--C-CccceEEeCCHHH
Q 015439 290 LEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVP--K-ETKAFYSLRDPSE 366 (406)
Q Consensus 290 lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~--~-~t~A~y~l~~~~e 366 (406)
--+.|. .|+.-++.+-+..+ . .++++||+.||.+|++.+ ..||.+.... . ...|+|.+..-
T Consensus 852 cR~sP~---QKa~IV~~vk~~~~---~---vtlaIGDGaNDv~mIq~A-----dVGIGIsG~EG~qA~~aSDfaI~~F-- 915 (1178)
T PLN03190 852 CRVAPL---QKAGIVALVKNRTS---D---MTLAIGDGANDVSMIQMA-----DVGVGISGQEGRQAVMASDFAMGQF-- 915 (1178)
T ss_pred ecCCHH---HHHHHHHHHHhcCC---c---EEEEECCCcchHHHHHhc-----CeeeeecCchhHHHHHhhccchhhh--
Confidence 356688 89988887766543 1 589999999999999997 4676543321 1 24688887654
Q ss_pred HHHHHHHHHH
Q 015439 367 VQEFLLSLVR 376 (406)
Q Consensus 367 V~~fL~~L~~ 376 (406)
++|++|+-
T Consensus 916 --r~L~rLLl 923 (1178)
T PLN03190 916 --RFLVPLLL 923 (1178)
T ss_pred --HHHHHHHH
Confidence 45555553
No 128
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=93.83 E-value=0.059 Score=50.17 Aligned_cols=14 Identities=50% Similarity=0.999 Sum_probs=12.7
Q ss_pred CEEEEEecCCccCC
Q 015439 117 KIAIFSDYDGTLSP 130 (406)
Q Consensus 117 ~~lI~lD~DGTL~~ 130 (406)
+++++||+||||+.
T Consensus 3 ~~~vifDfDgTi~~ 16 (219)
T PRK09552 3 SIQIFCDFDGTITN 16 (219)
T ss_pred CcEEEEcCCCCCCc
Confidence 56899999999998
No 129
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=93.47 E-value=0.17 Score=45.72 Aligned_cols=32 Identities=22% Similarity=0.098 Sum_probs=23.3
Q ss_pred hhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC
Q 015439 142 DGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG 173 (406)
Q Consensus 142 ~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 173 (406)
+.+.+.|+.|.+.+ +++|+||.....+..+++
T Consensus 83 ~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~ 115 (201)
T TIGR01491 83 DYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAE 115 (201)
T ss_pred ccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHH
Confidence 34456677777664 789999998887777764
No 130
>PTZ00445 p36-lilke protein; Provisional
Probab=93.30 E-value=0.22 Score=46.39 Aligned_cols=66 Identities=15% Similarity=0.141 Sum_probs=45.7
Q ss_pred CccchhHHHHHH-HhccCCEEEEEecCCccCCCC----CCCC------ccCCChhHHHHHHHHHhc-CCEEEEcCCCh
Q 015439 100 PSALKYFEKIMS-EAKKKKIAIFSDYDGTLSPIV----DDPD------RAIMSDGMRSAVRNVAKY-FPTAIITGRSR 165 (406)
Q Consensus 100 p~~L~~f~~i~~-~~~~k~~lI~lD~DGTL~~~~----~~p~------~~~~s~~~~~aL~~L~~~-~~v~I~SGR~~ 165 (406)
-+..++-+.++. +.+-..++|++|+|-||++.. .+|. -..++|+.+..+.+|.+. ++|+|+|=.+.
T Consensus 25 ~~~~~~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~ 102 (219)
T PTZ00445 25 LNPHESADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDK 102 (219)
T ss_pred CCHHHHHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccch
Confidence 344444445553 567778999999999999821 1221 123789999999999887 59999995543
No 131
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=93.27 E-value=0.25 Score=37.85 Aligned_cols=58 Identities=33% Similarity=0.311 Sum_probs=43.5
Q ss_pred HHHHHHHHHcCCCCCCCccEEEEeCC-cCCHHHHHHHHhCCCceEEEecCCC--CC------ccceEEeCCHHH
Q 015439 302 KAVEFLLESLGLSDSDDVLPIYIGDD-RTDEDAFKVLRKGNRGYGILVSSVP--KE------TKAFYSLRDPSE 366 (406)
Q Consensus 302 ~Al~~Ll~~lg~~~~~~~~viaiGD~-~NDedMf~~~~~~~~G~gVaVgna~--~~------t~A~y~l~~~~e 366 (406)
..++.+++.++++++ .+++|||+ .+|+.+=+.+. -.+|.|..+. .+ ..++|++++..|
T Consensus 8 ~~~~~a~~~~~~~~~---~~~~VGD~~~~Di~~a~~~G----~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e 74 (75)
T PF13242_consen 8 GMLEQALKRLGVDPS---RCVMVGDSLETDIEAAKAAG----IDTILVLTGVYSPEDLEKAEHKPDYVVDDLKE 74 (75)
T ss_dssp HHHHHHHHHHTSGGG---GEEEEESSTTTHHHHHHHTT----SEEEEESSSSSCCCGHHHSSSTTSEEESSGGG
T ss_pred HHHHHHHHHcCCCHH---HEEEEcCCcHhHHHHHHHcC----CcEEEECCCCCCHHHHhccCCCCCEEECCHHh
Confidence 457788889998876 79999999 99999888762 3577786643 21 368888877654
No 132
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=93.24 E-value=0.14 Score=45.42 Aligned_cols=34 Identities=18% Similarity=0.129 Sum_probs=25.4
Q ss_pred CChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC
Q 015439 140 MSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG 173 (406)
Q Consensus 140 ~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 173 (406)
+.+.+.+.|+.+.+.+ +++|+||.....+..++.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~ 108 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAE 108 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHH
Confidence 3466777778877774 789999998887777653
No 133
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=93.03 E-value=0.087 Score=56.43 Aligned_cols=64 Identities=25% Similarity=0.311 Sum_probs=47.6
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCCCc-cceEEeCCHHHHHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPKET-KAFYSLRDPSEVQEFL 371 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~~t-~A~y~l~~~~eV~~fL 371 (406)
.|+..++.|-++-|. .+.||||+.||..|++.++ .|.||.=..+...+ .|+|++..-.-|.+.|
T Consensus 768 QKA~v~~llq~~t~k------rvc~IGDGGNDVsMIq~A~---~GiGI~gkEGkQASLAADfSItqF~Hv~rLL 832 (1051)
T KOG0210|consen 768 QKAQVVRLLQKKTGK------RVCAIGDGGNDVSMIQAAD---VGIGIVGKEGKQASLAADFSITQFSHVSRLL 832 (1051)
T ss_pred HHHHHHHHHHHhhCc------eEEEEcCCCccchheeecc---cceeeecccccccchhccccHHHHHHHHHHh
Confidence 899888888888773 5999999999999999985 57777544344443 7888887655555533
No 134
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=92.94 E-value=0.13 Score=47.72 Aligned_cols=35 Identities=14% Similarity=0.091 Sum_probs=28.7
Q ss_pred CCChhHHHHHHHHHhcCCEEEEcCCChhhHHHHhC
Q 015439 139 IMSDGMRSAVRNVAKYFPTAIITGRSRDKVYELVG 173 (406)
Q Consensus 139 ~~s~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~ 173 (406)
.+.|...+.|+.+.+.++++|+||-....+..++.
T Consensus 68 ~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~ 102 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMR 102 (203)
T ss_pred CCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHH
Confidence 56677788888888777899999999988887764
No 135
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=92.72 E-value=0.2 Score=49.69 Aligned_cols=49 Identities=16% Similarity=0.099 Sum_probs=34.8
Q ss_pred ccEEEEeCCc-CCHHHHHHHHhCCCceEEEecCCC--C-----CccceEEeCCHHHHHHHH
Q 015439 319 VLPIYIGDDR-TDEDAFKVLRKGNRGYGILVSSVP--K-----ETKAFYSLRDPSEVQEFL 371 (406)
Q Consensus 319 ~~viaiGD~~-NDedMf~~~~~~~~G~gVaVgna~--~-----~t~A~y~l~~~~eV~~fL 371 (406)
..+++|||+. +|+.+=+.+ .-.+|.|..+. . .-.++|++++..|+..+|
T Consensus 264 ~~~~mIGD~~~tDI~ga~~~----G~~silV~tG~~~~~~~~~~~~p~~vv~~l~e~~~~i 320 (321)
T TIGR01456 264 HALYMVGDNPASDIIGAQNY----GWFSCLVKTGVYNGGDDLKECKPTLIVNDVFDAVTKI 320 (321)
T ss_pred heEEEEcCChhhhhhhHHhC----CceEEEecccccCCCCCCCCCCCCEEECCHHHHHHHh
Confidence 3799999996 999866554 13577786541 1 124688999998888776
No 136
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=92.70 E-value=0.17 Score=47.01 Aligned_cols=66 Identities=21% Similarity=0.142 Sum_probs=44.5
Q ss_pred CCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCC-C---CCccceEEeCCHHHHHHHHHH
Q 015439 298 WNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSV-P---KETKAFYSLRDPSEVQEFLLS 373 (406)
Q Consensus 298 vsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna-~---~~t~A~y~l~~~~eV~~fL~~ 373 (406)
..|..+++.+.. ..+ .+++|||+.||..|.+.+ |+.++=+.- . +...+.+..++-.+|.++|+.
T Consensus 143 ~~K~~~l~~~~~----~~~---~~i~iGDg~~D~~~a~~A-----d~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~~ 210 (214)
T TIGR03333 143 CCKPSLIRKLSE----PND---YHIVIGDSVTDVEAAKQS-----DLCFARDYLLNECEELGLNHAPFQDFYDVRKELEN 210 (214)
T ss_pred CCHHHHHHHHhh----cCC---cEEEEeCCHHHHHHHHhC-----CeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHHH
Confidence 468888887643 232 689999999999998885 675554321 1 122344456788899888875
Q ss_pred HH
Q 015439 374 LV 375 (406)
Q Consensus 374 L~ 375 (406)
..
T Consensus 211 ~~ 212 (214)
T TIGR03333 211 VK 212 (214)
T ss_pred Hh
Confidence 53
No 137
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=92.68 E-value=0.23 Score=45.88 Aligned_cols=59 Identities=14% Similarity=0.049 Sum_probs=45.0
Q ss_pred cCCEEEEEecCCccCCCCC-CC-CccCCChhHHHHHHHHHhcCCEEEEcCCChhhHHHHhC
Q 015439 115 KKKIAIFSDYDGTLSPIVD-DP-DRAIMSDGMRSAVRNVAKYFPTAIITGRSRDKVYELVG 173 (406)
Q Consensus 115 ~k~~lI~lD~DGTL~~~~~-~p-~~~~~s~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~ 173 (406)
..++++++|+|+||+.... .+ ..-..-|.+.+-|+.+.+.+.|+|-|..+...+...+.
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~ 79 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMT 79 (195)
T ss_pred CCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHH
Confidence 3457789999999997521 11 12245688999999999999999999999888877653
No 138
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=92.63 E-value=0.29 Score=43.48 Aligned_cols=60 Identities=18% Similarity=0.274 Sum_probs=45.9
Q ss_pred ccCCEEEEEecCCccCCCCCCCC------------------------------ccCCChhHHHHHHHHHhcCCEEEEcCC
Q 015439 114 KKKKIAIFSDYDGTLSPIVDDPD------------------------------RAIMSDGMRSAVRNVAKYFPTAIITGR 163 (406)
Q Consensus 114 ~~k~~lI~lD~DGTL~~~~~~p~------------------------------~~~~s~~~~~aL~~L~~~~~v~I~SGR 163 (406)
+.++..+++|+|.||+.-...|. ...+-|.+.+.|++|++...++|+|..
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~ 82 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMG 82 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCC
Confidence 45788899999999997433221 011246889999999977899999999
Q ss_pred ChhhHHHHhC
Q 015439 164 SRDKVYELVG 173 (406)
Q Consensus 164 ~~~~l~~~~~ 173 (406)
+...+..++.
T Consensus 83 ~~~yA~~vl~ 92 (156)
T TIGR02250 83 TRAYAQAIAK 92 (156)
T ss_pred cHHHHHHHHH
Confidence 9998888775
No 139
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=92.62 E-value=0.16 Score=55.43 Aligned_cols=68 Identities=19% Similarity=0.238 Sum_probs=51.2
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEeC--CH
Q 015439 289 VLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPK--ETKAFYSLR--DP 364 (406)
Q Consensus 289 ~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~--~t~A~y~l~--~~ 364 (406)
+-+..|. +|-.-++.+-+. | + .|.++||+.||-++++.+ ..||+|+++.+ +..|+.++- ++
T Consensus 488 ~A~~~Pe---dK~~iV~~lQ~~-G---~---~VaMtGDGvNDAPALa~A-----DVGIAMgsGTdvAkeAADiVLldd~~ 552 (679)
T PRK01122 488 LAEATPE---DKLALIRQEQAE-G---R---LVAMTGDGTNDAPALAQA-----DVGVAMNSGTQAAKEAGNMVDLDSNP 552 (679)
T ss_pred EccCCHH---HHHHHHHHHHHc-C---C---eEEEECCCcchHHHHHhC-----CEeEEeCCCCHHHHHhCCEEEeCCCH
Confidence 3456777 899888887643 2 1 599999999999999997 69999997654 357888873 56
Q ss_pred HHHHHHH
Q 015439 365 SEVQEFL 371 (406)
Q Consensus 365 ~eV~~fL 371 (406)
..+.+.+
T Consensus 553 s~Iv~av 559 (679)
T PRK01122 553 TKLIEVV 559 (679)
T ss_pred HHHHHHH
Confidence 6555544
No 140
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=92.53 E-value=0.22 Score=57.25 Aligned_cols=67 Identities=19% Similarity=0.215 Sum_probs=48.5
Q ss_pred EEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEec-CCCC--CccceEEeCC--H
Q 015439 290 LEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVS-SVPK--ETKAFYSLRD--P 364 (406)
Q Consensus 290 lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVg-na~~--~t~A~y~l~~--~ 364 (406)
-.+.|. +|..-++.|-+. |. .+.++||+.||.+|++.+ ..||+|| ++.. +..|++++.+ -
T Consensus 727 ar~sP~---~K~~iV~~lq~~-g~------~Vam~GDGvNDapaLk~A-----dVGIAmg~~gt~vak~aADivl~dd~f 791 (1053)
T TIGR01523 727 ARCAPQ---TKVKMIEALHRR-KA------FCAMTGDGVNDSPSLKMA-----NVGIAMGINGSDVAKDASDIVLSDDNF 791 (1053)
T ss_pred EecCHH---HHHHHHHHHHhc-CC------eeEEeCCCcchHHHHHhC-----CccEecCCCccHHHHHhcCEEEecCCH
Confidence 345566 888888887654 32 588999999999999997 6999998 4443 3578998854 3
Q ss_pred HHHHHHH
Q 015439 365 SEVQEFL 371 (406)
Q Consensus 365 ~eV~~fL 371 (406)
..+.+.+
T Consensus 792 ~~I~~~i 798 (1053)
T TIGR01523 792 ASILNAI 798 (1053)
T ss_pred HHHHHHH
Confidence 4444433
No 141
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=92.49 E-value=0.2 Score=46.57 Aligned_cols=62 Identities=16% Similarity=0.041 Sum_probs=45.8
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCce-EEEecCCCC-----CccceEEeCCHHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGY-GILVSSVPK-----ETKAFYSLRDPSEVQ 368 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~-gVaVgna~~-----~t~A~y~l~~~~eV~ 368 (406)
-+...++.+++.+|++++ .+++|||+.+|+++-+.+ |. .|.+..... ...|++++.+.+++.
T Consensus 149 p~~~~~~~~~~~~~~~~~---~~~~igDs~~Di~aA~~a-----G~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~ 216 (222)
T PRK10826 149 PHPEVYLNCAAKLGVDPL---TCVALEDSFNGMIAAKAA-----RMRSIVVPAPEQQNDPRWALADVKLESLTELT 216 (222)
T ss_pred CCHHHHHHHHHHcCCCHH---HeEEEcCChhhHHHHHHc-----CCEEEEecCCccCchhhhhhhheeccCHHHHh
Confidence 456789999999999876 799999999999998887 54 455543221 125777777777653
No 142
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=92.48 E-value=0.15 Score=45.76 Aligned_cols=33 Identities=27% Similarity=0.312 Sum_probs=27.0
Q ss_pred CHHHHHHHH---HHHcCCCCCCCccEEEEeCCcCCHHHHH
Q 015439 299 NKGKAVEFL---LESLGLSDSDDVLPIYIGDDRTDEDAFK 335 (406)
Q Consensus 299 sKG~Al~~L---l~~lg~~~~~~~~viaiGD~~NDedMf~ 335 (406)
+|..+++.+ ... +.... .++++||+.||.+||+
T Consensus 157 ~K~~~l~~~~~~~~~-~~~~~---~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-DIDPD---RVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHH-THTCC---EEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhc-CCCCC---eEEEEECCHHHHHHhC
Confidence 499999999 444 55443 7999999999999986
No 143
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=92.41 E-value=0.26 Score=43.91 Aligned_cols=57 Identities=16% Similarity=0.182 Sum_probs=43.4
Q ss_pred CEEEEEecCCccCCCCCCCCc-------------------cCCChhHHHHHHHHHhcCCEEEEcCCChhhHHHHhC
Q 015439 117 KIAIFSDYDGTLSPIVDDPDR-------------------AIMSDGMRSAVRNVAKYFPTAIITGRSRDKVYELVG 173 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~~~~p~~-------------------~~~s~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~ 173 (406)
+..+++|+|+||+.-...|.. -..-|.+.+.|+.|.+...++|.|.-+...+..++.
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~ 76 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLD 76 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHH
Confidence 356889999999975433311 024578899999998888899999999888887764
No 144
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=92.39 E-value=0.29 Score=43.65 Aligned_cols=37 Identities=38% Similarity=0.389 Sum_probs=30.7
Q ss_pred cCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHH
Q 015439 294 PVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 294 P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~ 337 (406)
+. |..|+..++.+++.. ++ .+++|||+.||..|.+.+
T Consensus 145 ~~-g~~K~~~~~~~~~~~---~~---~~i~iGD~~~D~~aa~~~ 181 (188)
T TIGR01489 145 PC-GCCKGKVIHKLSEPK---YQ---HIIYIGDGVTDVCPAKLS 181 (188)
T ss_pred CC-CCCHHHHHHHHHhhc---Cc---eEEEECCCcchhchHhcC
Confidence 55 889999999998875 22 699999999999987764
No 145
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=92.27 E-value=0.16 Score=55.50 Aligned_cols=78 Identities=19% Similarity=0.200 Sum_probs=55.2
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEeC--CH
Q 015439 289 VLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPK--ETKAFYSLR--DP 364 (406)
Q Consensus 289 ~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~--~t~A~y~l~--~~ 364 (406)
+-++.|. +|-..++.+-+. | + .|.+.||+.||-++++.+ ..||+||++.. +..|+.++- +.
T Consensus 484 ~A~~~Pe---dK~~iV~~lQ~~-G---~---~VaMtGDGvNDAPALa~A-----DVGIAMgsGTdvAkeAADiVLldd~l 548 (673)
T PRK14010 484 VAECKPE---DKINVIREEQAK-G---H---IVAMTGDGTNDAPALAEA-----NVGLAMNSGTMSAKEAANLIDLDSNP 548 (673)
T ss_pred EcCCCHH---HHHHHHHHHHhC-C---C---EEEEECCChhhHHHHHhC-----CEEEEeCCCCHHHHHhCCEEEcCCCH
Confidence 4466777 888888886543 3 1 588999999999999997 69999998764 357888883 45
Q ss_pred HHHHHHH---HHHHHhhhhh
Q 015439 365 SEVQEFL---LSLVRWKKLE 381 (406)
Q Consensus 365 ~eV~~fL---~~L~~~~~~~ 381 (406)
..+.+.+ ++++...+..
T Consensus 549 s~Iv~av~~gR~i~~n~~~~ 568 (673)
T PRK14010 549 TKLMEVVLIGKQLLMTRGSL 568 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 5555544 3444444443
No 146
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=92.20 E-value=0.064 Score=50.74 Aligned_cols=53 Identities=23% Similarity=0.182 Sum_probs=39.4
Q ss_pred cCCEEEEEecCCccCCCCC------------CC---------CccCCChhHHHHHHHHHhcC-CEEEEcCCChhh
Q 015439 115 KKKIAIFSDYDGTLSPIVD------------DP---------DRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDK 167 (406)
Q Consensus 115 ~k~~lI~lD~DGTL~~~~~------------~p---------~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~ 167 (406)
.++..|+||+|+|++.... +| ..+..-|.+++.++.+.+.+ .|+++|||+...
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~ 144 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQ 144 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTC
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchh
Confidence 6788999999999875110 11 12344466889999999986 899999999874
No 147
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=92.17 E-value=0.27 Score=55.38 Aligned_cols=68 Identities=19% Similarity=0.272 Sum_probs=49.9
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEeC--CH
Q 015439 289 VLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPK--ETKAFYSLR--DP 364 (406)
Q Consensus 289 ~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~--~t~A~y~l~--~~ 364 (406)
+-.+.|. +|..-++.|-+ .|. .|.++||+.||.++++.+ ..||+||++.+ +..|+.++- +-
T Consensus 583 fAr~~Pe---~K~~iV~~lq~-~G~------vVam~GDGvNDapALk~A-----dVGIAmg~gtdvAk~aADiVLldd~~ 647 (867)
T TIGR01524 583 FARLTPM---QKSRIIGLLKK-AGH------TVGFLGDGINDAPALRKA-----DVGISVDTAADIAKEASDIILLEKSL 647 (867)
T ss_pred EEECCHH---HHHHHHHHHHh-CCC------EEEEECCCcccHHHHHhC-----CEEEEeCCccHHHHHhCCEEEecCCh
Confidence 3446677 89888888654 342 589999999999999997 69999997654 357888884 33
Q ss_pred HHHHHHH
Q 015439 365 SEVQEFL 371 (406)
Q Consensus 365 ~eV~~fL 371 (406)
..+...+
T Consensus 648 ~~I~~ai 654 (867)
T TIGR01524 648 MVLEEGV 654 (867)
T ss_pred HHHHHHH
Confidence 4444433
No 148
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=92.13 E-value=0.15 Score=49.36 Aligned_cols=44 Identities=23% Similarity=0.238 Sum_probs=34.1
Q ss_pred CCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCCh
Q 015439 116 KKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSR 165 (406)
Q Consensus 116 k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~ 165 (406)
+...++||+||||.. . ...=|...++|++|++++ +++++|-.+.
T Consensus 7 ~y~~~l~DlDGvl~~-----G-~~~ipga~e~l~~L~~~g~~~iflTNn~~ 51 (269)
T COG0647 7 KYDGFLFDLDGVLYR-----G-NEAIPGAAEALKRLKAAGKPVIFLTNNST 51 (269)
T ss_pred hcCEEEEcCcCceEe-----C-CccCchHHHHHHHHHHcCCeEEEEeCCCC
Confidence 345688999999997 2 345578999999999995 8888875443
No 149
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=92.03 E-value=0.41 Score=47.48 Aligned_cols=57 Identities=18% Similarity=0.182 Sum_probs=44.3
Q ss_pred CEEEEEecCCccCCCC--CC-CC---ccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC
Q 015439 117 KIAIFSDYDGTLSPIV--DD-PD---RAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG 173 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~~--~~-p~---~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 173 (406)
.++|++|+|+||...+ ++ +. -...-+.+.++|+.|.+.+ .++|||..+...+...+.
T Consensus 3 ~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~ 66 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFE 66 (320)
T ss_pred eEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH
Confidence 5789999999999854 21 11 1123478999999999885 899999999998888774
No 150
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=91.82 E-value=0.14 Score=46.66 Aligned_cols=33 Identities=21% Similarity=0.264 Sum_probs=28.6
Q ss_pred HHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHH
Q 015439 302 KAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 302 ~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~ 337 (406)
+.+..+++.+++.+. .++++||+.||..|++.+
T Consensus 182 k~~~~~i~~l~~~~~---~v~~vGDg~nD~~al~~A 214 (215)
T PF00702_consen 182 KIFLRIIKELQVKPG---EVAMVGDGVNDAPALKAA 214 (215)
T ss_dssp HHHHHHHHHHTCTGG---GEEEEESSGGHHHHHHHS
T ss_pred hhHHHHHHHHhcCCC---EEEEEccCHHHHHHHHhC
Confidence 367888999998765 799999999999999875
No 151
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=91.59 E-value=0.59 Score=42.05 Aligned_cols=48 Identities=29% Similarity=0.309 Sum_probs=35.6
Q ss_pred CEEEEEecCCccCCCCC----CCCccCCChhHHHHHHHHHhcC-CEEEEcCCC
Q 015439 117 KIAIFSDYDGTLSPIVD----DPDRAIMSDGMRSAVRNVAKYF-PTAIITGRS 164 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~~~----~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~ 164 (406)
.++++||.||||..... .+....+-+.+.++|++|.+.+ +++|+|..+
T Consensus 3 ~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 47899999999976431 1223345678899999999884 888888765
No 152
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=91.58 E-value=0.5 Score=45.34 Aligned_cols=69 Identities=9% Similarity=-0.035 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHcCCC-CCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCC-------------------------
Q 015439 300 KGKAVEFLLESLGLS-DSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPK------------------------- 353 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~-~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~------------------------- 353 (406)
+...+...++++|+. ++ .+++|||+.+|+.+=+.++ -.+|.|..+..
T Consensus 160 ~p~~~~~a~~~l~~~~~~---e~l~IGDs~~Di~aA~~aG----~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (267)
T PRK13478 160 YPWMALKNAIELGVYDVA---ACVKVDDTVPGIEEGLNAG----MWTVGVILSGNELGLSEEEYQALSAAELAARRERAR 232 (267)
T ss_pred ChHHHHHHHHHcCCCCCc---ceEEEcCcHHHHHHHHHCC----CEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHH
Confidence 356788999999985 34 6999999999998877652 23455543311
Q ss_pred ----CccceEEeCCHHHHHHHHHHHH
Q 015439 354 ----ETKAFYSLRDPSEVQEFLLSLV 375 (406)
Q Consensus 354 ----~t~A~y~l~~~~eV~~fL~~L~ 375 (406)
+..|+++++++.++..+|+.+.
T Consensus 233 ~~l~~~~a~~vi~~~~~l~~~l~~~~ 258 (267)
T PRK13478 233 ARLRAAGAHYVIDTIADLPAVIADIE 258 (267)
T ss_pred HHHHHcCCCeehhhHHHHHHHHHHHH
Confidence 2358899999999998886443
No 153
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=91.53 E-value=0.24 Score=45.96 Aligned_cols=35 Identities=26% Similarity=0.316 Sum_probs=26.1
Q ss_pred CCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC
Q 015439 139 IMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG 173 (406)
Q Consensus 139 ~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 173 (406)
.+.+.+.+.|+.|.+.+ +++|+||.....+..++.
T Consensus 70 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~ 105 (214)
T TIGR03333 70 EIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLE 105 (214)
T ss_pred cccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHH
Confidence 34566667777787764 899999998887777663
No 154
>PRK08238 hypothetical protein; Validated
Probab=91.51 E-value=0.37 Score=50.64 Aligned_cols=47 Identities=9% Similarity=-0.071 Sum_probs=35.5
Q ss_pred CCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhCCcC--ceEEccCCc
Q 015439 139 IMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVGLTE--LYYAGSHGM 185 (406)
Q Consensus 139 ~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~l~~--~~li~~nGa 185 (406)
.+.+++++.|+++++.+ +++|+|+.+...++.+....+ ..++|+++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~Vigsd~~ 121 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDGVFASDGT 121 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCEEEeCCCc
Confidence 35588999999999886 899999999998887764222 246666654
No 155
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=91.41 E-value=0.35 Score=54.76 Aligned_cols=60 Identities=23% Similarity=0.293 Sum_probs=47.6
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEeC
Q 015439 288 KVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPK--ETKAFYSLR 362 (406)
Q Consensus 288 ~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~--~t~A~y~l~ 362 (406)
-+-.+.|. +|-.-++.|-+. |. .|.++||+.||.++++.+ ..||+||++.. +..|+.++-
T Consensus 617 VfAr~sPe---~K~~iV~~Lq~~-G~------vVamtGDGvNDaPALk~A-----DVGIAmg~gtdvAkeaADiVLl 678 (903)
T PRK15122 617 VFAKLTPL---QKSRVLKALQAN-GH------TVGFLGDGINDAPALRDA-----DVGISVDSGADIAKESADIILL 678 (903)
T ss_pred EEEEeCHH---HHHHHHHHHHhC-CC------EEEEECCCchhHHHHHhC-----CEEEEeCcccHHHHHhcCEEEe
Confidence 45567787 899998887653 32 589999999999999997 69999997654 357888884
No 156
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=91.24 E-value=0.46 Score=46.03 Aligned_cols=51 Identities=20% Similarity=0.176 Sum_probs=37.1
Q ss_pred CEEEEEecCCccCCC-------C--CCC------C-------ccCCChhHHHHHHHHHhcC-CEEEEcCCChhh
Q 015439 117 KIAIFSDYDGTLSPI-------V--DDP------D-------RAIMSDGMRSAVRNVAKYF-PTAIITGRSRDK 167 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~-------~--~~p------~-------~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~ 167 (406)
+-+++||+|+|++.. . ..+ + .+..-|.+++..+.+.+.+ .|+++|||+-..
T Consensus 101 ~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~ 174 (275)
T TIGR01680 101 KDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDK 174 (275)
T ss_pred CCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence 467889999999931 1 011 1 3445678899999998885 899999998643
No 157
>PRK06769 hypothetical protein; Validated
Probab=90.69 E-value=0.42 Score=42.98 Aligned_cols=65 Identities=20% Similarity=0.134 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCC-C-----------CccceEEeCCHHHH
Q 015439 300 KGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVP-K-----------ETKAFYSLRDPSEV 367 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~-~-----------~t~A~y~l~~~~eV 367 (406)
+-..+..++++++++++ .+++|||+.+|+.+=+.+. -.+|.+..+. . +-.++|++.++.++
T Consensus 95 ~p~~~~~~~~~l~~~p~---~~i~IGD~~~Di~aA~~aG----i~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el 167 (173)
T PRK06769 95 STGMLLQAAEKHGLDLT---QCAVIGDRWTDIVAAAKVN----ATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDA 167 (173)
T ss_pred CHHHHHHHHHHcCCCHH---HeEEEcCCHHHHHHHHHCC----CeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHH
Confidence 35577888899998776 7999999999888766651 2355564432 1 12477888888888
Q ss_pred HHHH
Q 015439 368 QEFL 371 (406)
Q Consensus 368 ~~fL 371 (406)
.++|
T Consensus 168 ~~~l 171 (173)
T PRK06769 168 VNWI 171 (173)
T ss_pred HHHH
Confidence 7765
No 158
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=90.69 E-value=0.45 Score=53.90 Aligned_cols=59 Identities=24% Similarity=0.322 Sum_probs=46.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEeC
Q 015439 289 VLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPK--ETKAFYSLR 362 (406)
Q Consensus 289 ~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~--~t~A~y~l~ 362 (406)
+-.+.|. +|-.-++.|-+ .|. -|.++||+.||.++++.+ ..||+||++.+ +..|+.++-
T Consensus 618 fAr~sPe---~K~~IV~~Lq~-~G~------vVam~GDGvNDaPALk~A-----DVGIAmg~gtdvAkeaADiVLl 678 (902)
T PRK10517 618 FARLTPM---HKERIVTLLKR-EGH------VVGFMGDGINDAPALRAA-----DIGISVDGAVDIAREAADIILL 678 (902)
T ss_pred EEEcCHH---HHHHHHHHHHH-CCC------EEEEECCCcchHHHHHhC-----CEEEEeCCcCHHHHHhCCEEEe
Confidence 4456777 89888888654 342 589999999999999997 69999998754 357888884
No 159
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=90.59 E-value=0.53 Score=44.10 Aligned_cols=68 Identities=18% Similarity=0.232 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCce--EEEecCCCC--CccceEEeCCHHHHHHHHHHHH
Q 015439 300 KGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGY--GILVSSVPK--ETKAFYSLRDPSEVQEFLLSLV 375 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~--gVaVgna~~--~t~A~y~l~~~~eV~~fL~~L~ 375 (406)
+....+.+++++|++++ .+++|||+.+|+.+=+.+ |. .+.|.+... ...+...+.+.+++.++|+.|.
T Consensus 151 ~p~~~~~~~~~~~~~p~---~~l~igDs~~di~aA~~a-----G~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 222 (224)
T PRK14988 151 DQRLWQAVAEHTGLKAE---RTLFIDDSEPILDAAAQF-----GIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM 222 (224)
T ss_pred CHHHHHHHHHHcCCChH---HEEEEcCCHHHHHHHHHc-----CCeEEEEEeCCCCCccchhccCCCcHHHHHHHhhhhc
Confidence 36788999999999886 799999999886654443 55 355665332 2345555677778888777664
No 160
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=90.31 E-value=0.4 Score=54.61 Aligned_cols=68 Identities=21% Similarity=0.253 Sum_probs=49.9
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEec-CCCC--CccceEEeCC--
Q 015439 289 VLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVS-SVPK--ETKAFYSLRD-- 363 (406)
Q Consensus 289 ~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVg-na~~--~t~A~y~l~~-- 363 (406)
+-.+.|. +|..-++.|-+ .|. .|.++||+.||.+|++.+ ..||+|| ++.+ +..|++++.+
T Consensus 649 far~sPe---~K~~iV~~lq~-~g~------vVam~GDGvNDapALk~A-----dVGIAmg~~gtdvAk~aADivL~dd~ 713 (941)
T TIGR01517 649 LARSSPL---DKQLLVLMLKD-MGE------VVAVTGDGTNDAPALKLA-----DVGFSMGISGTEVAKEASDIILLDDN 713 (941)
T ss_pred EEECCHH---HHHHHHHHHHH-CCC------EEEEECCCCchHHHHHhC-----CcceecCCCccHHHHHhCCEEEecCC
Confidence 3466777 89999888765 332 599999999999999997 5999999 5543 3578998853
Q ss_pred HHHHHHHH
Q 015439 364 PSEVQEFL 371 (406)
Q Consensus 364 ~~eV~~fL 371 (406)
-..+.+.+
T Consensus 714 f~~I~~~i 721 (941)
T TIGR01517 714 FASIVRAV 721 (941)
T ss_pred HHHHHHHH
Confidence 34444433
No 161
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=90.20 E-value=0.17 Score=45.42 Aligned_cols=36 Identities=8% Similarity=0.010 Sum_probs=30.1
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~ 337 (406)
-+-..++.+++++|++++ .+++|||+.+|.++=+.+
T Consensus 143 P~p~~~~~~~~~~~~~~~---~~l~igDs~~di~aA~~a 178 (188)
T PRK10725 143 PAPDTFLRCAQLMGVQPT---QCVVFEDADFGIQAARAA 178 (188)
T ss_pred CChHHHHHHHHHcCCCHH---HeEEEeccHhhHHHHHHC
Confidence 456789999999999765 799999999999876664
No 162
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=90.12 E-value=0.29 Score=44.65 Aligned_cols=45 Identities=24% Similarity=0.274 Sum_probs=34.2
Q ss_pred CEEEEEecCCccCCCC----CCCCccCCChhHHHHHHHHHhcC-CEEEEc
Q 015439 117 KIAIFSDYDGTLSPIV----DDPDRAIMSDGMRSAVRNVAKYF-PTAIIT 161 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~~----~~p~~~~~s~~~~~aL~~L~~~~-~v~I~S 161 (406)
.++||+|-||||--.. ..+++-..-+.++++|++|.+.+ .++|+|
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~~gy~lVvvT 54 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQRAGYKLVVVT 54 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHhCCCeEEEEE
Confidence 6789999999998622 23344556788999999998875 677777
No 163
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=90.07 E-value=0.46 Score=54.42 Aligned_cols=58 Identities=24% Similarity=0.198 Sum_probs=43.6
Q ss_pred EEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCC-CC--CccceEEeCC
Q 015439 291 EIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSV-PK--ETKAFYSLRD 363 (406)
Q Consensus 291 EI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna-~~--~t~A~y~l~~ 363 (406)
.+.|. +|..-++.|- +.|. .+.++||+.||.+|++.+ ..||+||+. .. +..|++++.+
T Consensus 666 R~sPe---qK~~IV~~lq-~~g~------vv~~~GDG~ND~paLk~A-----dVGiamg~~G~~vak~aADivL~d 726 (997)
T TIGR01106 666 RTSPQ---QKLIIVEGCQ-RQGA------IVAVTGDGVNDSPALKKA-----DIGVAMGIAGSDVSKQAADMILLD 726 (997)
T ss_pred ECCHH---HHHHHHHHHH-HCCC------EEEEECCCcccHHHHhhC-----CcceecCCcccHHHHHhhceEEec
Confidence 44455 7887777664 3442 589999999999999997 699999963 32 3578999865
No 164
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=89.95 E-value=0.5 Score=43.62 Aligned_cols=65 Identities=17% Similarity=0.094 Sum_probs=47.2
Q ss_pred CHHHHHHHHHHHcCCC-CCCCccEEEEeCCcCCHHHHHHHHhCCCceE--EEecCCC--C----CccceEEeCCHHHHHH
Q 015439 299 NKGKAVEFLLESLGLS-DSDDVLPIYIGDDRTDEDAFKVLRKGNRGYG--ILVSSVP--K----ETKAFYSLRDPSEVQE 369 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~-~~~~~~viaiGD~~NDedMf~~~~~~~~G~g--VaVgna~--~----~t~A~y~l~~~~eV~~ 369 (406)
-+...+..+++++|+. ++ .+++|||+.+|+.+=+.+ |+. |.+.... . ...+.+++.+..++..
T Consensus 146 P~p~~~~~a~~~~~~~~~~---~~~~igD~~~Di~aa~~a-----G~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~ 217 (220)
T TIGR03351 146 PAPDLILRAMELTGVQDVQ---SVAVAGDTPNDLEAGINA-----GAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPA 217 (220)
T ss_pred CCHHHHHHHHHHcCCCChh---HeEEeCCCHHHHHHHHHC-----CCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHH
Confidence 3568899999999986 44 799999999999887776 554 3443321 1 2357888888888766
Q ss_pred HH
Q 015439 370 FL 371 (406)
Q Consensus 370 fL 371 (406)
.+
T Consensus 218 ~~ 219 (220)
T TIGR03351 218 LL 219 (220)
T ss_pred hh
Confidence 44
No 165
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=89.80 E-value=0.74 Score=41.95 Aligned_cols=36 Identities=25% Similarity=0.275 Sum_probs=28.6
Q ss_pred EcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHH
Q 015439 293 RPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKV 336 (406)
Q Consensus 293 ~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~ 336 (406)
.+- |.+|++.+..+.+.. + -++|+||+..|+.+-+.
T Consensus 142 s~f-G~dK~~vI~~l~e~~----e---~~fy~GDsvsDlsaakl 177 (220)
T COG4359 142 SQF-GHDKSSVIHELSEPN----E---SIFYCGDSVSDLSAAKL 177 (220)
T ss_pred ccc-CCCcchhHHHhhcCC----c---eEEEecCCcccccHhhh
Confidence 355 999999999987643 2 59999999999987555
No 166
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=89.66 E-value=0.37 Score=42.92 Aligned_cols=15 Identities=40% Similarity=0.769 Sum_probs=12.1
Q ss_pred CEEEEEecCCccCCC
Q 015439 117 KIAIFSDYDGTLSPI 131 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~ 131 (406)
+.+++||+||||++.
T Consensus 1 ~~~iiFD~dgTL~~~ 15 (188)
T TIGR01489 1 KVVVVSDFDGTITLN 15 (188)
T ss_pred CeEEEEeCCCcccCC
Confidence 467889999999873
No 167
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=89.14 E-value=0.49 Score=54.51 Aligned_cols=69 Identities=25% Similarity=0.253 Sum_probs=50.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCCCccceEEeC--CHHH
Q 015439 289 VLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPKETKAFYSLR--DPSE 366 (406)
Q Consensus 289 ~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~~t~A~y~l~--~~~e 366 (406)
+=-+.|. +|..-++.|-+ .|. .|.+.||+-||.+|++.+ ..||+|+++.....|++++. +-..
T Consensus 782 fAR~sP~---qK~~iV~~lq~-~g~------~V~m~GDG~ND~~ALK~A-----dVGIam~~~das~AA~f~l~~~~~~~ 846 (1054)
T TIGR01657 782 FARMAPD---QKETLVELLQK-LDY------TVGMCGDGANDCGALKQA-----DVGISLSEAEASVAAPFTSKLASISC 846 (1054)
T ss_pred EEecCHH---HHHHHHHHHHh-CCC------eEEEEeCChHHHHHHHhc-----CcceeeccccceeecccccCCCcHHH
Confidence 3456677 88888887654 443 699999999999999997 58999998644456888874 3445
Q ss_pred HHHHHH
Q 015439 367 VQEFLL 372 (406)
Q Consensus 367 V~~fL~ 372 (406)
|.+.++
T Consensus 847 I~~~I~ 852 (1054)
T TIGR01657 847 VPNVIR 852 (1054)
T ss_pred HHHHHH
Confidence 555443
No 168
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=89.09 E-value=0.95 Score=42.88 Aligned_cols=65 Identities=12% Similarity=0.059 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHcCCC-CCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCC-------------------------
Q 015439 300 KGKAVEFLLESLGLS-DSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPK------------------------- 353 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~-~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~------------------------- 353 (406)
+-..+...++++|+. ++ .+++|||+.+|+.+=+.++ -.+|.|..+..
T Consensus 158 ~p~~~~~a~~~l~~~~~~---~~l~IGDs~~Di~aA~~aG----i~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (253)
T TIGR01422 158 APWMALKNAIELGVYDVA---ACVKVGDTVPDIEEGRNAG----MWTVGLILSSNELGLSEEEYRALDPAELEARRAEAT 230 (253)
T ss_pred CHHHHHHHHHHcCCCCch---heEEECCcHHHHHHHHHCC----CeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHH
Confidence 356788899999984 54 7999999999998876652 24555543321
Q ss_pred ----CccceEEeCCHHHHHHHH
Q 015439 354 ----ETKAFYSLRDPSEVQEFL 371 (406)
Q Consensus 354 ----~t~A~y~l~~~~eV~~fL 371 (406)
+..|+++++++.++..+|
T Consensus 231 ~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 231 ARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHHHhcCCCEehhcHHHHHHhh
Confidence 135888899988877654
No 169
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=88.96 E-value=0.92 Score=41.65 Aligned_cols=65 Identities=22% Similarity=0.319 Sum_probs=46.7
Q ss_pred CHHHHHHHHHHHc-CCCCCCCccEEEEeCCc-CCHHHHHHHHhCCCce-EEEecCC--C--CCccceEEeCCHHHHHHHH
Q 015439 299 NKGKAVEFLLESL-GLSDSDDVLPIYIGDDR-TDEDAFKVLRKGNRGY-GILVSSV--P--KETKAFYSLRDPSEVQEFL 371 (406)
Q Consensus 299 sKG~Al~~Ll~~l-g~~~~~~~~viaiGD~~-NDedMf~~~~~~~~G~-gVaVgna--~--~~t~A~y~l~~~~eV~~fL 371 (406)
-+....+.+++++ |++++ .+++|||+. +|+.+=+.+ |. +|.+... + ....+.|.+.+..++..+|
T Consensus 153 P~~~~~~~~~~~~~~~~~~---~~v~igD~~~~di~~A~~~-----G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~~ 224 (224)
T TIGR02254 153 PDKEIFNYALERMPKFSKE---EVLMIGDSLTADIKGGQNA-----GLDTCWMNPDMHPNPDDIIPTYEIRSLEELYEIL 224 (224)
T ss_pred CCHHHHHHHHHHhcCCCch---heEEECCCcHHHHHHHHHC-----CCcEEEECCCCCCCCCCCCCceEECCHHHHHhhC
Confidence 3456788999999 98876 799999997 799887765 43 3444321 1 1235778899999887764
No 170
>PRK11587 putative phosphatase; Provisional
Probab=88.56 E-value=0.23 Score=46.09 Aligned_cols=60 Identities=15% Similarity=0.041 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCc-eEEEecCCCC---CccceEEeCCHHHH
Q 015439 300 KGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRG-YGILVSSVPK---ETKAFYSLRDPSEV 367 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G-~gVaVgna~~---~t~A~y~l~~~~eV 367 (406)
+.......++.+|++++ ++++|||+.+|+.+=+.+ | .+|.|.+... ...+++++++..++
T Consensus 140 ~p~~~~~~~~~~g~~p~---~~l~igDs~~di~aA~~a-----G~~~i~v~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 140 EPDAYLLGAQLLGLAPQ---ECVVVEDAPAGVLSGLAA-----GCHVIAVNAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred CcHHHHHHHHHcCCCcc---cEEEEecchhhhHHHHHC-----CCEEEEECCCCchhhhccCCEEecchhhe
Confidence 35778888999999876 799999999998765554 4 4677765432 13577888777764
No 171
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=88.47 E-value=0.26 Score=45.44 Aligned_cols=14 Identities=36% Similarity=0.425 Sum_probs=12.6
Q ss_pred CEEEEEecCCccCC
Q 015439 117 KIAIFSDYDGTLSP 130 (406)
Q Consensus 117 ~~lI~lD~DGTL~~ 130 (406)
.++|+||+||||++
T Consensus 3 ~~~viFD~DGTL~d 16 (214)
T PRK13288 3 INTVLFDLDGTLIN 16 (214)
T ss_pred ccEEEEeCCCcCcc
Confidence 46889999999998
No 172
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=88.31 E-value=0.64 Score=42.80 Aligned_cols=60 Identities=20% Similarity=0.244 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeCCc-CCHHHHHHHHhCCCce-EEEecCCCC-------CccceEEeCCHHHH
Q 015439 300 KGKAVEFLLESLGLSDSDDVLPIYIGDDR-TDEDAFKVLRKGNRGY-GILVSSVPK-------ETKAFYSLRDPSEV 367 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~~~~~~~viaiGD~~-NDedMf~~~~~~~~G~-gVaVgna~~-------~t~A~y~l~~~~eV 367 (406)
+......+++.+|++++ .+++|||+. +|+.+=+.+ |+ +|.+..... ...+.|++.+..++
T Consensus 152 ~~~~~~~~~~~~~~~~~---~~~~igDs~~~di~~A~~a-----G~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 152 HPKIFYAALKRLGVKPE---EAVMVGDRLDKDIKGAKNL-----GMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred CHHHHHHHHHHcCCChh---hEEEECCChHHHHHHHHHC-----CCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 45678999999999876 799999997 999887775 43 566654321 12466777776654
No 173
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=88.25 E-value=0.29 Score=44.57 Aligned_cols=34 Identities=26% Similarity=0.293 Sum_probs=28.2
Q ss_pred HHHHHHHHHHcCCCCCCCccEEEEeCCc-CCHHHHHHH
Q 015439 301 GKAVEFLLESLGLSDSDDVLPIYIGDDR-TDEDAFKVL 337 (406)
Q Consensus 301 G~Al~~Ll~~lg~~~~~~~~viaiGD~~-NDedMf~~~ 337 (406)
....+.+++.+|++++ .+++|||+. +|+.+=+.+
T Consensus 163 ~~~~~~~~~~~~~~~~---~~~~IgD~~~~Di~~A~~a 197 (203)
T TIGR02252 163 PKIFQEALERAGISPE---EALHIGDSLRNDYQGARAA 197 (203)
T ss_pred HHHHHHHHHHcCCChh---HEEEECCCchHHHHHHHHc
Confidence 4578999999999876 799999997 898776664
No 174
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=88.13 E-value=1.5 Score=44.61 Aligned_cols=73 Identities=16% Similarity=0.049 Sum_probs=53.1
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCC---CccceEEeCCHHHH-HHHHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPK---ETKAFYSLRDPSEV-QEFLLSL 374 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~---~t~A~y~l~~~~eV-~~fL~~L 374 (406)
-+.......++.+|+.++ .+++|||+.+|+.+=+.++ -..|.|..... ...|+|++++.+++ ...|+.|
T Consensus 273 P~Peifl~A~~~lgl~Pe---ecl~IGDS~~DIeAAk~AG----m~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~~~l~~l 345 (381)
T PLN02575 273 PDPEMFIYAAQLLNFIPE---RCIVFGNSNQTVEAAHDAR----MKCVAVASKHPIYELGAADLVVRRLDELSIVDLKNL 345 (381)
T ss_pred CCHHHHHHHHHHcCCCcc---cEEEEcCCHHHHHHHHHcC----CEEEEECCCCChhHhcCCCEEECCHHHHHHHHHhhh
Confidence 356788999999999886 7999999999987766652 24556655322 13588999999997 5566666
Q ss_pred HHhh
Q 015439 375 VRWK 378 (406)
Q Consensus 375 ~~~~ 378 (406)
+...
T Consensus 346 ~~~~ 349 (381)
T PLN02575 346 ADIE 349 (381)
T ss_pred hhcC
Confidence 6543
No 175
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=87.98 E-value=0.24 Score=45.13 Aligned_cols=32 Identities=16% Similarity=0.184 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHH
Q 015439 300 KGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAF 334 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf 334 (406)
+-..+..+++.+|++++ .+++|||+.+|+.+=
T Consensus 163 ~p~~~~~~~~~~~~~~~---~~i~vGD~~~Di~aA 194 (197)
T TIGR01548 163 NPEPLILAAKALGVEAC---HAAMVGDTVDDIITG 194 (197)
T ss_pred CHHHHHHHHHHhCcCcc---cEEEEeCCHHHHHHH
Confidence 35668889999999876 799999999998763
No 176
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=87.44 E-value=0.37 Score=45.51 Aligned_cols=63 Identities=13% Similarity=0.123 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeCC-cCCHHHHHHHHhCCCc-eEEEecCCCCC--------ccceEEeCCHHHHHH
Q 015439 300 KGKAVEFLLESLGLSDSDDVLPIYIGDD-RTDEDAFKVLRKGNRG-YGILVSSVPKE--------TKAFYSLRDPSEVQE 369 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~~~~~~~viaiGD~-~NDedMf~~~~~~~~G-~gVaVgna~~~--------t~A~y~l~~~~eV~~ 369 (406)
+.......++++|++++ .+++|||+ ..|+.+=+.+ | .+|.+...... ..+++.+.+-.++.+
T Consensus 165 ~p~~~~~a~~~~~~~~~---~~~~VGD~~~~Di~~A~~a-----G~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~ 236 (238)
T PRK10748 165 FSDMYHLAAEKLNVPIG---EILHVGDDLTTDVAGAIRC-----GMQACWINPENGDLMQTWDSRLLPHIEISRLASLTS 236 (238)
T ss_pred cHHHHHHHHHHcCCChh---HEEEEcCCcHHHHHHHHHC-----CCeEEEEcCCCccccccccccCCCCEEECCHHHHHh
Confidence 46678888999999876 79999999 5999876654 4 35555432111 235566666666665
Q ss_pred H
Q 015439 370 F 370 (406)
Q Consensus 370 f 370 (406)
+
T Consensus 237 ~ 237 (238)
T PRK10748 237 L 237 (238)
T ss_pred h
Confidence 4
No 177
>PRK11590 hypothetical protein; Provisional
Probab=87.36 E-value=0.7 Score=42.79 Aligned_cols=43 Identities=16% Similarity=0.034 Sum_probs=30.5
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecC
Q 015439 297 DWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSS 350 (406)
Q Consensus 297 gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgn 350 (406)
|-.|-..++.. +|.+. ....+-|||.||.+||+.+ +.+++|..
T Consensus 161 g~~K~~~l~~~---~~~~~---~~~~aY~Ds~~D~pmL~~a-----~~~~~vnp 203 (211)
T PRK11590 161 GHEKVAQLERK---IGTPL---RLYSGYSDSKQDNPLLYFC-----QHRWRVTP 203 (211)
T ss_pred ChHHHHHHHHH---hCCCc---ceEEEecCCcccHHHHHhC-----CCCEEECc
Confidence 44455444444 45333 2578999999999999998 78888864
No 178
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=87.25 E-value=0.32 Score=46.22 Aligned_cols=60 Identities=18% Similarity=0.181 Sum_probs=44.2
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCce-EEEecCC-CC----CccceEEeCCHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGY-GILVSSV-PK----ETKAFYSLRDPSE 366 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~-gVaVgna-~~----~t~A~y~l~~~~e 366 (406)
-+...+...++++|++++ .+++|||+..|+.+=+.+ |. .|.+... +. ...|+|++.+..+
T Consensus 165 P~p~~~~~a~~~~~~~~~---~~l~vgDs~~Di~aA~~a-----Gi~~i~v~~g~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 165 PHPDPYLKALEVLKVSKD---HTFVFEDSVSGIKAGVAA-----GMPVVGLTTRNPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred CChHHHHHHHHHhCCChh---HEEEEcCCHHHHHHHHHC-----CCEEEEEeCCCCHHHHhhcCCCEEeccchh
Confidence 345788999999999876 799999999999876665 43 4455322 11 2368899998887
No 179
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=87.22 E-value=1.1 Score=41.92 Aligned_cols=92 Identities=23% Similarity=0.317 Sum_probs=58.0
Q ss_pred ecCeEEEEEcCCCCCHHHHHHHHHHHc---CCCCCCCccEEEEeCCcCCHHHHHHHHhC-----CCceEEE--ecCCCCC
Q 015439 285 HGRKVLEIRPVIDWNKGKAVEFLLESL---GLSDSDDVLPIYIGDDRTDEDAFKVLRKG-----NRGYGIL--VSSVPKE 354 (406)
Q Consensus 285 ~g~~~lEI~P~~gvsKG~Al~~Ll~~l---g~~~~~~~~viaiGD~~NDedMf~~~~~~-----~~G~gVa--Vgna~~~ 354 (406)
+..+.-..-|+ +.-||..++.+..+. |+.- +.++|+||+-||.--...+++- ..||.+- +..-+..
T Consensus 150 H~~hsC~~CPs-NmCKg~Vl~~~~~s~~~~gv~y---er~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl~k~~~~~p~~ 225 (256)
T KOG3120|consen 150 HTQHSCNLCPS-NMCKGLVLDELVASQLKDGVRY---ERLIYVGDGANDFCPVLRLRACDVAMPRKGFPLWKLISANPML 225 (256)
T ss_pred CCCCccCcCch-hhhhhHHHHHHHHHHhhcCCce---eeEEEEcCCCCCcCcchhcccCceecccCCCchHhhhhcCcce
Confidence 44456667899 999999999998876 3332 3799999999999766666431 0133221 1100111
Q ss_pred ccceEEe-CCHHHHHHHHHHHHHhhhh
Q 015439 355 TKAFYSL-RDPSEVQEFLLSLVRWKKL 380 (406)
Q Consensus 355 t~A~y~l-~~~~eV~~fL~~L~~~~~~ 380 (406)
-.|.... .+-.++.+.|..++...+.
T Consensus 226 ~kasV~~W~sg~d~~~~L~~lik~~~~ 252 (256)
T KOG3120|consen 226 LKASVLEWSSGEDLERILQQLIKTIQV 252 (256)
T ss_pred eeeeEEecccHHHHHHHHHHHHHHhhh
Confidence 2344333 5778888888888765543
No 180
>PRK11590 hypothetical protein; Provisional
Probab=86.98 E-value=0.35 Score=44.78 Aligned_cols=15 Identities=40% Similarity=0.689 Sum_probs=13.4
Q ss_pred CCEEEEEecCCccCC
Q 015439 116 KKIAIFSDYDGTLSP 130 (406)
Q Consensus 116 k~~lI~lD~DGTL~~ 130 (406)
++++++||+||||+.
T Consensus 5 ~~k~~iFD~DGTL~~ 19 (211)
T PRK11590 5 ERRVVFFDLDGTLHQ 19 (211)
T ss_pred cceEEEEecCCCCcc
Confidence 577999999999995
No 181
>PRK09449 dUMP phosphatase; Provisional
Probab=86.91 E-value=2 Score=39.67 Aligned_cols=65 Identities=18% Similarity=0.238 Sum_probs=46.3
Q ss_pred HHHHHHHHHHcCCCCCCCccEEEEeCCc-CCHHHHHHHHhCCCce-EEEecC-CC---CCccceEEeCCHHHHHHHHH
Q 015439 301 GKAVEFLLESLGLSDSDDVLPIYIGDDR-TDEDAFKVLRKGNRGY-GILVSS-VP---KETKAFYSLRDPSEVQEFLL 372 (406)
Q Consensus 301 G~Al~~Ll~~lg~~~~~~~~viaiGD~~-NDedMf~~~~~~~~G~-gVaVgn-a~---~~t~A~y~l~~~~eV~~fL~ 372 (406)
-...+.+++++|+.+. ..+++|||+. +|+.+=+.+ |. +|.+.. .. ....++|.+.+..++.++|.
T Consensus 153 p~~~~~~~~~~~~~~~--~~~~~vgD~~~~Di~~A~~a-----G~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 153 VAIFDYALEQMGNPDR--SRVLMVGDNLHSDILGGINA-----GIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred HHHHHHHHHHcCCCCc--ccEEEEcCCcHHHHHHHHHC-----CCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHHh
Confidence 4678899999997532 2699999997 698876664 54 455542 11 12358899999999988764
No 182
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=86.86 E-value=1.1 Score=40.33 Aligned_cols=58 Identities=21% Similarity=0.220 Sum_probs=34.9
Q ss_pred CEEEEEecCCccCCC-----CCCC---------------CccCCChhHHHHHHHHHhcC-CEEEEcCCCh-hhHHHHhCC
Q 015439 117 KIAIFSDYDGTLSPI-----VDDP---------------DRAIMSDGMRSAVRNVAKYF-PTAIITGRSR-DKVYELVGL 174 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~-----~~~p---------------~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~-~~l~~~~~l 174 (406)
.+||+||+|+||-+. ...| ..-.+-+...++|+.|.+.+ .+++||--+. +.+++.++.
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~ 82 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKL 82 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHh
Confidence 468999999999972 1111 11234578999999999985 8999996543 456666654
No 183
>PRK11587 putative phosphatase; Provisional
Probab=86.59 E-value=1.8 Score=40.07 Aligned_cols=30 Identities=27% Similarity=0.236 Sum_probs=20.3
Q ss_pred CCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhc
Q 015439 116 KKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKY 154 (406)
Q Consensus 116 k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~ 154 (406)
+.+.|+||+||||++ +. +...++++++.+.
T Consensus 2 ~~k~viFDlDGTL~D-----s~----~~~~~a~~~~~~~ 31 (218)
T PRK11587 2 RCKGFLFDLDGTLVD-----SL----PAVERAWSNWADR 31 (218)
T ss_pred CCCEEEEcCCCCcCc-----CH----HHHHHHHHHHHHH
Confidence 356789999999998 22 2345566665554
No 184
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=86.40 E-value=0.79 Score=42.63 Aligned_cols=43 Identities=19% Similarity=0.053 Sum_probs=30.9
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecC
Q 015439 297 DWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSS 350 (406)
Q Consensus 297 gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgn 350 (406)
|--|-..++..+ |.+. ....+.|||.||.+||+.+ |.+++|..
T Consensus 160 g~~Kv~rl~~~~---~~~~---~~~~aYsDS~~D~pmL~~a-----~~~~~Vnp 202 (210)
T TIGR01545 160 GHEKVAQLEQKI---GSPL---KLYSGYSDSKQDNPLLAFC-----EHRWRVSK 202 (210)
T ss_pred ChHHHHHHHHHh---CCCh---hheEEecCCcccHHHHHhC-----CCcEEECc
Confidence 445555555444 4322 2578999999999999998 78888863
No 185
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=86.34 E-value=0.62 Score=41.80 Aligned_cols=35 Identities=26% Similarity=0.302 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHH
Q 015439 300 KGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~ 337 (406)
+-...+++++++|++++ .+++|||+..|+.+=+.+
T Consensus 143 ~p~~~~~~~~~~~~~~~---~~l~vgD~~~di~aA~~~ 177 (184)
T TIGR01993 143 SPQAYEKALREAGVDPE---RAIFFDDSARNIAAAKAL 177 (184)
T ss_pred CHHHHHHHHHHhCCCcc---ceEEEeCCHHHHHHHHHc
Confidence 35688999999999876 799999998887665554
No 186
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=86.15 E-value=0.36 Score=43.07 Aligned_cols=35 Identities=17% Similarity=0.134 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHH
Q 015439 300 KGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~ 337 (406)
+...++.+++.+|++++ .+++|||+.+|+.+=+.+
T Consensus 144 ~~~~~~~~~~~~~~~~~---~~v~IgD~~~di~aA~~~ 178 (185)
T TIGR02009 144 HPETFLLAAELLGVSPN---ECVVFEDALAGVQAARAA 178 (185)
T ss_pred ChHHHHHHHHHcCCCHH---HeEEEeCcHhhHHHHHHC
Confidence 35577899999998875 799999999999887765
No 187
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=85.94 E-value=1.2 Score=39.83 Aligned_cols=48 Identities=33% Similarity=0.401 Sum_probs=37.1
Q ss_pred EEEEEecCCccCCC---CCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCCh
Q 015439 118 IAIFSDYDGTLSPI---VDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSR 165 (406)
Q Consensus 118 ~lI~lD~DGTL~~~---~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~ 165 (406)
+++|+|.||||... ...+++..+-|.+.++|++|.+.+ +++|+|.-+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 68999999999942 223345556789999999999884 8999997654
No 188
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=85.54 E-value=1.6 Score=48.13 Aligned_cols=97 Identities=26% Similarity=0.263 Sum_probs=66.1
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEec-CCCC--CccceEEeCC-H
Q 015439 289 VLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVS-SVPK--ETKAFYSLRD-P 364 (406)
Q Consensus 289 ~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVg-na~~--~t~A~y~l~~-~ 364 (406)
+--+.|. +|-+-++.|-++ | + .+..-||+.||-++++.+ -.||||| ++.. ++.|+-+|.| .
T Consensus 658 FaR~~P~---HK~kIVeaLq~~-g---e---ivAMTGDGVNDApALK~A-----dIGIAMG~~GTdVaKeAsDMVL~DDn 722 (972)
T KOG0202|consen 658 FARAEPQ---HKLKIVEALQSR-G---E---VVAMTGDGVNDAPALKKA-----DIGIAMGISGTDVAKEASDMVLADDN 722 (972)
T ss_pred EEecCch---hHHHHHHHHHhc-C---C---EEEecCCCccchhhhhhc-----ccceeecCCccHhhHhhhhcEEecCc
Confidence 3445566 898888876553 2 2 677889999999999998 5999999 5543 4667777743 1
Q ss_pred ---------------HHHHHHHHHHHHhhhhhHh----------------hhhccccccccCCCCCc
Q 015439 365 ---------------SEVQEFLLSLVRWKKLEKE----------------FESATSSLFTKGAQATS 400 (406)
Q Consensus 365 ---------------~eV~~fL~~L~~~~~~~~~----------------~~~~~~~~~~~~~~~~~ 400 (406)
+-..+|++-++...--... -.=+|=|+.|.||.|++
T Consensus 723 FstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~a 789 (972)
T KOG0202|consen 723 FSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATA 789 (972)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhh
Confidence 1256677766643322111 23479999999998875
No 189
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=85.37 E-value=0.5 Score=43.58 Aligned_cols=28 Identities=18% Similarity=0.166 Sum_probs=19.4
Q ss_pred EEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhc
Q 015439 118 IAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKY 154 (406)
Q Consensus 118 ~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~ 154 (406)
++|+||+||||++ +. +...++++++.+.
T Consensus 2 k~iiFD~DGTL~d-----s~----~~~~~~~~~~~~~ 29 (220)
T TIGR03351 2 SLVVLDMAGTTVD-----ED----GLVYRALRQAVTA 29 (220)
T ss_pred cEEEEecCCCeec-----cC----chHHHHHHHHHHH
Confidence 5788999999998 22 3455666666554
No 190
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=85.33 E-value=0.75 Score=43.59 Aligned_cols=14 Identities=29% Similarity=0.323 Sum_probs=12.7
Q ss_pred CEEEEEecCCccCC
Q 015439 117 KIAIFSDYDGTLSP 130 (406)
Q Consensus 117 ~~lI~lD~DGTL~~ 130 (406)
.+.|+||+||||++
T Consensus 2 ~k~viFD~DGTLiD 15 (253)
T TIGR01422 2 IEAVIFDWAGTTVD 15 (253)
T ss_pred ceEEEEeCCCCeec
Confidence 46899999999998
No 191
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=85.25 E-value=0.44 Score=44.18 Aligned_cols=17 Identities=29% Similarity=0.395 Sum_probs=14.7
Q ss_pred ccCCEEEEEecCCccCC
Q 015439 114 KKKKIAIFSDYDGTLSP 130 (406)
Q Consensus 114 ~~k~~lI~lD~DGTL~~ 130 (406)
+++.+.|+||+||||++
T Consensus 4 ~~~~k~iiFD~DGTL~d 20 (222)
T PRK10826 4 PRQILAAIFDMDGLLID 20 (222)
T ss_pred cccCcEEEEcCCCCCCc
Confidence 45678899999999998
No 192
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=84.60 E-value=2.5 Score=40.69 Aligned_cols=63 Identities=13% Similarity=0.092 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCce-EEEecCCC-C--CccceEEeCCHHHHHHH
Q 015439 300 KGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGY-GILVSSVP-K--ETKAFYSLRDPSEVQEF 370 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~-gVaVgna~-~--~t~A~y~l~~~~eV~~f 370 (406)
+...+..+++++|++++ .+++|||+.+|+.+=+.+ |. .|++.... . -..|+|++.++.++...
T Consensus 167 ~Pe~~~~a~~~l~~~p~---~~l~IgDs~~Di~aA~~a-----G~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~ 233 (260)
T PLN03243 167 DPEMFMYAAERLGFIPE---RCIVFGNSNSSVEAAHDG-----CMKCVAVAGKHPVYELSAGDLVVRRLDDLSVV 233 (260)
T ss_pred CHHHHHHHHHHhCCChH---HeEEEcCCHHHHHHHHHc-----CCEEEEEecCCchhhhccCCEEeCCHHHHHHH
Confidence 45688899999999876 799999999998876665 43 44554221 1 13588899998886543
No 193
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=84.38 E-value=2.1 Score=39.36 Aligned_cols=33 Identities=27% Similarity=0.316 Sum_probs=21.2
Q ss_pred CEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhc
Q 015439 117 KIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKY 154 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~ 154 (406)
.++++||+||||++ ...........+.+.+.+.
T Consensus 2 ~~~viFDlDGTL~d-----s~~~~~~~~~~~~~~~~~~ 34 (221)
T TIGR02253 2 IKAIFFDLDDTLID-----TSGLAEKARRNAIEVLIEA 34 (221)
T ss_pred ceEEEEeCCCCCcC-----CCCccCHHHHHHHHHHHHC
Confidence 46789999999998 3333444444455555554
No 194
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=84.24 E-value=0.58 Score=42.99 Aligned_cols=36 Identities=17% Similarity=0.017 Sum_probs=21.9
Q ss_pred HHHHHHHHHcCCCCCCCccEEEEeC---CcCCHHHHHHHH
Q 015439 302 KAVEFLLESLGLSDSDDVLPIYIGD---DRTDEDAFKVLR 338 (406)
Q Consensus 302 ~Al~~Ll~~lg~~~~~~~~viaiGD---~~NDedMf~~~~ 338 (406)
..++.+++.+|+... ++.+++.+| .-.|-++|+.+-
T Consensus 124 ~~~~~~l~~~~l~~~-fd~i~~~~~~~~~KP~~~~~~~~~ 162 (224)
T TIGR02254 124 ETQYKRLRKSGLFPF-FDDIFVSEDAGIQKPDKEIFNYAL 162 (224)
T ss_pred HHHHHHHHHCCcHhh-cCEEEEcCccCCCCCCHHHHHHHH
Confidence 345677888888642 335555555 236777777653
No 195
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=83.80 E-value=0.54 Score=45.85 Aligned_cols=60 Identities=22% Similarity=0.168 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCce-EEEecCCC--CC--ccceEEeCCHHHH
Q 015439 300 KGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGY-GILVSSVP--KE--TKAFYSLRDPSEV 367 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~-gVaVgna~--~~--t~A~y~l~~~~eV 367 (406)
+...+..+++.+|++++ .+++|||+.+|+.+=+.+ |+ .|.|.... .+ ..|++++++..++
T Consensus 204 ~p~~~~~a~~~~~~~p~---~~l~IGDs~~Di~aA~~a-----G~~~i~v~~g~~~~~~l~~ad~vi~~~~~l 268 (286)
T PLN02779 204 DPDIYNLAAETLGVDPS---RCVVVEDSVIGLQAAKAA-----GMRCIVTKSSYTADEDFSGADAVFDCLGDV 268 (286)
T ss_pred CHHHHHHHHHHhCcChH---HEEEEeCCHHhHHHHHHc-----CCEEEEEccCCccccccCCCcEEECChhhc
Confidence 35688999999999875 799999999999987775 54 44553321 11 3588899888764
No 196
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=83.74 E-value=0.44 Score=46.22 Aligned_cols=33 Identities=24% Similarity=0.192 Sum_probs=21.5
Q ss_pred hccCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhc
Q 015439 113 AKKKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKY 154 (406)
Q Consensus 113 ~~~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~ 154 (406)
.+...+.++||+||||++ +. +....+++++.+.
T Consensus 58 ~~~~~k~vIFDlDGTLiD-----S~----~~~~~a~~~~~~~ 90 (273)
T PRK13225 58 YPQTLQAIIFDFDGTLVD-----SL----PTVVAIANAHAPD 90 (273)
T ss_pred hhhhcCEEEECCcCcccc-----CH----HHHHHHHHHHHHH
Confidence 333466789999999998 22 2345566666554
No 197
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=83.12 E-value=1 Score=43.20 Aligned_cols=15 Identities=33% Similarity=0.390 Sum_probs=13.3
Q ss_pred CCEEEEEecCCccCC
Q 015439 116 KKIAIFSDYDGTLSP 130 (406)
Q Consensus 116 k~~lI~lD~DGTL~~ 130 (406)
+.++|+||+||||++
T Consensus 3 ~~k~vIFDlDGTLiD 17 (267)
T PRK13478 3 KIQAVIFDWAGTTVD 17 (267)
T ss_pred ceEEEEEcCCCCeec
Confidence 357899999999998
No 198
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=83.00 E-value=2.3 Score=40.41 Aligned_cols=48 Identities=19% Similarity=0.291 Sum_probs=27.1
Q ss_pred HHHHHHHHcCCCCCCCccEEEEeCC----cCCHHHHHHHHh-CC--CceEEEecCCC
Q 015439 303 AVEFLLESLGLSDSDDVLPIYIGDD----RTDEDAFKVLRK-GN--RGYGILVSSVP 352 (406)
Q Consensus 303 Al~~Ll~~lg~~~~~~~~viaiGD~----~NDedMf~~~~~-~~--~G~gVaVgna~ 352 (406)
.++.+++.+|+... + ..++.+|+ --|-++|..+-+ .+ ..-.+.||..+
T Consensus 137 ~~~~~l~~~gl~~~-F-d~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~ 191 (248)
T PLN02770 137 NAELMISLLGLSDF-F-QAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSV 191 (248)
T ss_pred HHHHHHHHcCChhh-C-cEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEEcCCH
Confidence 45778888998642 2 24455554 356667666533 21 12256777654
No 199
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=82.76 E-value=2.3 Score=47.29 Aligned_cols=69 Identities=20% Similarity=0.197 Sum_probs=51.9
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEe--CCH
Q 015439 289 VLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPK--ETKAFYSL--RDP 364 (406)
Q Consensus 289 ~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~--~t~A~y~l--~~~ 364 (406)
+-|+.|. +|..-++.|-+.-+ -+..+||+.||-++|..+ -.||+||.+.. ...|++++ ++-
T Consensus 766 ~aev~P~---~K~~~Ik~lq~~~~-------~VaMVGDGINDaPALA~A-----dVGIaig~gs~vAieaADIVLmrn~L 830 (951)
T KOG0207|consen 766 YAEVLPE---QKAEKIKEIQKNGG-------PVAMVGDGINDAPALAQA-----DVGIAIGAGSDVAIEAADIVLMRNDL 830 (951)
T ss_pred EeccCch---hhHHHHHHHHhcCC-------cEEEEeCCCCccHHHHhh-----ccceeeccccHHHHhhCCEEEEccch
Confidence 5688888 88888888776532 599999999999999997 58999988643 25788887 344
Q ss_pred HHHHHHHH
Q 015439 365 SEVQEFLL 372 (406)
Q Consensus 365 ~eV~~fL~ 372 (406)
.+|...++
T Consensus 831 ~~v~~ai~ 838 (951)
T KOG0207|consen 831 RDVPFAID 838 (951)
T ss_pred hhhHHHHH
Confidence 55555443
No 200
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=82.76 E-value=0.71 Score=43.02 Aligned_cols=48 Identities=27% Similarity=0.516 Sum_probs=26.3
Q ss_pred HHHHHHHHHHcCCCCCCCccEEEEe-CCc-C---CHHH-HHHHHhCCCc--eEEEecCC
Q 015439 301 GKAVEFLLESLGLSDSDDVLPIYIG-DDR-T---DEDA-FKVLRKGNRG--YGILVSSV 351 (406)
Q Consensus 301 G~Al~~Ll~~lg~~~~~~~~viaiG-D~~-N---DedM-f~~~~~~~~G--~gVaVgna 351 (406)
...++.+++.+|+... +...+| |+. . |-.+ +..++..+.. -.+.||..
T Consensus 116 ~~~~~~~l~~~gl~~~---F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs 171 (220)
T COG0546 116 ERELDILLKALGLADY---FDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDS 171 (220)
T ss_pred HHHHHHHHHHhCCccc---cceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheEEECCC
Confidence 3567888999999864 444555 532 1 3344 4444443222 23666654
No 201
>PHA02597 30.2 hypothetical protein; Provisional
Probab=82.71 E-value=0.61 Score=42.31 Aligned_cols=61 Identities=15% Similarity=0.064 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCce-EEEecCCCC--CccceEEeCCHHHHH
Q 015439 300 KGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGY-GILVSSVPK--ETKAFYSLRDPSEVQ 368 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~-gVaVgna~~--~t~A~y~l~~~~eV~ 368 (406)
|-..+..+++.+| + + .+++|||+.+|..+=+.+- .|+ .|.|..... ...+.|.+.+.+|+.
T Consensus 132 kp~~~~~a~~~~~-~-~---~~v~vgDs~~di~aA~~a~---~Gi~~i~~~~~~~~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 132 KEKLFIKAKEKYG-D-R---VVCFVDDLAHNLDAAHEAL---SQLPVIHMLRGERDHIPKLAHRVKSWNDIE 195 (197)
T ss_pred cHHHHHHHHHHhC-C-C---cEEEeCCCHHHHHHHHHHH---cCCcEEEecchhhccccchhhhhccHHHHh
Confidence 5678999999999 3 3 6999999999977655530 033 445543321 224456666666543
No 202
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=82.66 E-value=1.2 Score=50.73 Aligned_cols=60 Identities=27% Similarity=0.298 Sum_probs=45.6
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecC-CCC--CccceEEeC
Q 015439 288 KVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSS-VPK--ETKAFYSLR 362 (406)
Q Consensus 288 ~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgn-a~~--~t~A~y~l~ 362 (406)
-+-.+.|. +|..-++.|-++ |. .+.+.||+-||.+|++.+ ..||+|+. +.+ +..|+.++-
T Consensus 618 VfARvsP~---qK~~IV~~lq~~-g~------vVamtGDGvNDapALk~A-----DVGIamg~~Gtdaak~Aadivl~ 680 (917)
T COG0474 618 VFARVSPE---QKARIVEALQKS-GH------VVAMTGDGVNDAPALKAA-----DVGIAMGGEGTDAAKEAADIVLL 680 (917)
T ss_pred EEEEcCHH---HHHHHHHHHHhC-CC------EEEEeCCCchhHHHHHhc-----CccEEecccHHHHHHhhcceEee
Confidence 35667788 899888887765 53 699999999999999997 59999985 332 245666653
No 203
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=82.06 E-value=0.57 Score=43.87 Aligned_cols=28 Identities=29% Similarity=0.315 Sum_probs=19.6
Q ss_pred EEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhc
Q 015439 118 IAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKY 154 (406)
Q Consensus 118 ~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~ 154 (406)
+.|+||+||||++ +. +...++++.+.+.
T Consensus 13 k~viFD~DGTL~D-----s~----~~~~~a~~~~~~~ 40 (229)
T PRK13226 13 RAVLFDLDGTLLD-----SA----PDMLATVNAMLAA 40 (229)
T ss_pred CEEEEcCcCcccc-----CH----HHHHHHHHHHHHH
Confidence 4788999999998 32 3455666666554
No 204
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=81.86 E-value=0.57 Score=42.82 Aligned_cols=25 Identities=28% Similarity=0.286 Sum_probs=16.9
Q ss_pred EEEecCCccCCCCCCCCccCCChhHHHHHHHHHh
Q 015439 120 IFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAK 153 (406)
Q Consensus 120 I~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~ 153 (406)
|+||+||||++ +. +-..++++++.+
T Consensus 1 iiFDlDGTL~D-----s~----~~~~~~~~~~~~ 25 (205)
T TIGR01454 1 VVFDLDGVLVD-----SF----AVMREAFAIAYR 25 (205)
T ss_pred CeecCcCcccc-----CH----HHHHHHHHHHHH
Confidence 57999999998 22 345556665544
No 205
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=81.85 E-value=0.62 Score=40.33 Aligned_cols=34 Identities=26% Similarity=0.308 Sum_probs=28.0
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKV 336 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~ 336 (406)
.+...+.++++++|+++ .+++|||+..|+.+=+.
T Consensus 119 p~~~~~~~~~~~~~~~~----~~l~iGDs~~Di~aa~~ 152 (154)
T TIGR01549 119 PEPEIFLAALESLGLPP----EVLHVGDNLNDIEGARN 152 (154)
T ss_pred cCHHHHHHHHHHcCCCC----CEEEEeCCHHHHHHHHH
Confidence 45788999999999874 49999999999876544
No 206
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=81.49 E-value=0.91 Score=41.93 Aligned_cols=41 Identities=10% Similarity=0.088 Sum_probs=33.2
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEE
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGIL 347 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVa 347 (406)
-+.......++++|++++ .+++|||+.+|+.+=+.+ |+.+.
T Consensus 143 P~p~~~~~a~~~~~~~p~---~~l~igDs~~di~aA~~a-----G~~~i 183 (221)
T PRK10563 143 PDPALMFHAAEAMNVNVE---NCILVDDSSAGAQSGIAA-----GMEVF 183 (221)
T ss_pred CChHHHHHHHHHcCCCHH---HeEEEeCcHhhHHHHHHC-----CCEEE
Confidence 457899999999999875 799999999998876664 65543
No 207
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=81.37 E-value=0.75 Score=44.48 Aligned_cols=29 Identities=24% Similarity=0.244 Sum_probs=20.6
Q ss_pred CEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhc
Q 015439 117 KIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKY 154 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~ 154 (406)
.++|+||+||||++ +. +...+++..+.+.
T Consensus 13 ~k~viFDlDGTL~D-----s~----~~~~~a~~~~~~~ 41 (272)
T PRK13223 13 PRLVMFDLDGTLVD-----SV----PDLAAAVDRMLLE 41 (272)
T ss_pred CCEEEEcCCCcccc-----CH----HHHHHHHHHHHHH
Confidence 34899999999998 21 3456677766655
No 208
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=81.28 E-value=6.4 Score=38.36 Aligned_cols=72 Identities=14% Similarity=0.032 Sum_probs=49.1
Q ss_pred HhccCCEEEEEecCCccCCCCCCCCccC-CChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHh---CCcC-ceEEccCCc
Q 015439 112 EAKKKKIAIFSDYDGTLSPIVDDPDRAI-MSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELV---GLTE-LYYAGSHGM 185 (406)
Q Consensus 112 ~~~~k~~lI~lD~DGTL~~~~~~p~~~~-~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~---~l~~-~~li~~nGa 185 (406)
+.-..+.+|+||+|.||.... +... ..+...+.|++|.+.+ .+++=|--+.+-+..-+ ++.+ ..++-+.|.
T Consensus 117 ~~~~~phVIVfDlD~TLItd~---~~v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~ 193 (297)
T PF05152_consen 117 LVWEPPHVIVFDLDSTLITDE---GDVRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGN 193 (297)
T ss_pred ccCCCCcEEEEECCCcccccC---CccccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCc
Confidence 444556789999999999832 2223 3578899999999997 67888877887776654 4433 234444444
Q ss_pred e
Q 015439 186 D 186 (406)
Q Consensus 186 ~ 186 (406)
.
T Consensus 194 ~ 194 (297)
T PF05152_consen 194 K 194 (297)
T ss_pred c
Confidence 3
No 209
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=81.22 E-value=2.8 Score=40.79 Aligned_cols=15 Identities=33% Similarity=0.379 Sum_probs=13.1
Q ss_pred CCEEEEEecCCccCC
Q 015439 116 KKIAIFSDYDGTLSP 130 (406)
Q Consensus 116 k~~lI~lD~DGTL~~ 130 (406)
+.++|+||+||||++
T Consensus 39 ~~k~VIFDlDGTLvD 53 (286)
T PLN02779 39 LPEALLFDCDGVLVE 53 (286)
T ss_pred CCcEEEEeCceeEEc
Confidence 356899999999998
No 210
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=81.20 E-value=1.3 Score=41.19 Aligned_cols=15 Identities=53% Similarity=0.665 Sum_probs=13.3
Q ss_pred CCEEEEEecCCccCC
Q 015439 116 KKIAIFSDYDGTLSP 130 (406)
Q Consensus 116 k~~lI~lD~DGTL~~ 130 (406)
.+++.+||+||||+.
T Consensus 4 ~~~la~FDfDgTLt~ 18 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQ 18 (210)
T ss_pred cCcEEEEcCCCCCcc
Confidence 467888999999998
No 211
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=81.02 E-value=0.69 Score=41.19 Aligned_cols=36 Identities=28% Similarity=0.192 Sum_probs=30.5
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~ 337 (406)
-+-...+..+++++++++ .+++|||+.+|..+=+.+
T Consensus 142 p~p~~~~~~~~~~~~~~~---~~v~vgD~~~di~aA~~a 177 (185)
T TIGR01990 142 PDPEIFLAAAEGLGVSPS---ECIGIEDAQAGIEAIKAA 177 (185)
T ss_pred CChHHHHHHHHHcCCCHH---HeEEEecCHHHHHHHHHc
Confidence 457788999999999875 799999999998887775
No 212
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=80.85 E-value=5.4 Score=38.14 Aligned_cols=48 Identities=17% Similarity=0.266 Sum_probs=39.3
Q ss_pred EEEEEecCCccCCCCCCCCcc---CCChhHHHHHHHHHhcC-CEEEEcCCChhhHHH
Q 015439 118 IAIFSDYDGTLSPIVDDPDRA---IMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYE 170 (406)
Q Consensus 118 ~lI~lD~DGTL~~~~~~p~~~---~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~ 170 (406)
++|+||+||||.. ... .+.+...++|++|++.+ +++++|||+......
T Consensus 2 k~i~~D~DGtl~~-----~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~ 53 (257)
T TIGR01458 2 KGVLLDISGVLYI-----SDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQD 53 (257)
T ss_pred CEEEEeCCCeEEe-----CCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHH
Confidence 4789999999998 223 26789999999999985 899999988876443
No 213
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=80.80 E-value=0.8 Score=42.86 Aligned_cols=14 Identities=36% Similarity=0.420 Sum_probs=12.4
Q ss_pred CEEEEEecCCccCC
Q 015439 117 KIAIFSDYDGTLSP 130 (406)
Q Consensus 117 ~~lI~lD~DGTL~~ 130 (406)
.++|+||+||||++
T Consensus 10 ~k~vIFDlDGTL~d 23 (224)
T PRK14988 10 VDTVLLDMDGTLLD 23 (224)
T ss_pred CCEEEEcCCCCccc
Confidence 45799999999998
No 214
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=80.78 E-value=1.5 Score=37.82 Aligned_cols=49 Identities=8% Similarity=0.125 Sum_probs=41.5
Q ss_pred EEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcCCEEEEcCCChhhHHHHhCC
Q 015439 120 IFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYFPTAIITGRSRDKVYELVGL 174 (406)
Q Consensus 120 I~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~l 174 (406)
.+.++++|+.. .+.+=+++.+.|++|.+-..++|+||-.+.++.+...+
T Consensus 17 ~~~~v~~tiat------gGklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae~ 65 (152)
T COG4087 17 KAGKVLYTIAT------GGKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAEF 65 (152)
T ss_pred ecceEEEEEcc------CcEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHHH
Confidence 35789999997 45677889999999999889999999999998887643
No 215
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=80.68 E-value=1.8 Score=45.51 Aligned_cols=57 Identities=28% Similarity=0.336 Sum_probs=42.8
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCCCccceEEeCC
Q 015439 289 VLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPKETKAFYSLRD 363 (406)
Q Consensus 289 ~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~~t~A~y~l~~ 363 (406)
+-++.|. +|...++.+.+. | . .++++||+.||.+|++.+ ..||+|+ + ...|++++-+
T Consensus 387 ~~~~~p~---~K~~~v~~l~~~-g---~---~v~~vGDg~nD~~al~~A-----dvgia~~-a--~~~adivl~~ 443 (499)
T TIGR01494 387 FARVTPE---EKAALVEALQKK-G---R---VVAMTGDGVNDAPALKKA-----DVGIAMG-A--KAAADIVLLD 443 (499)
T ss_pred eeccCHH---HHHHHHHHHHHC-C---C---EEEEECCChhhHHHHHhC-----CCccccc-h--HHhCCeEEec
Confidence 4456666 888888877432 3 2 699999999999999986 6899997 2 4458888753
No 216
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=80.14 E-value=1.7 Score=42.42 Aligned_cols=55 Identities=25% Similarity=0.430 Sum_probs=38.6
Q ss_pred CEEEEEecCCccCCCCC-C----C-------CccCCChhHHHHHHHHHhc-CCEEEEcCCChhhHHHH
Q 015439 117 KIAIFSDYDGTLSPIVD-D----P-------DRAIMSDGMRSAVRNVAKY-FPTAIITGRSRDKVYEL 171 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~~~-~----p-------~~~~~s~~~~~aL~~L~~~-~~v~I~SGR~~~~l~~~ 171 (406)
+..|++|+|-||+.... + | ....++++.++..++|-++ .|+=|-+..+.++-.++
T Consensus 22 ~lqvisDFD~Tlt~~~~~~g~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~Y~PiE~d~~~~~~eK~~~ 89 (277)
T TIGR01544 22 KLQIISDFDYTLSRFSYEDGKRCPTCHGIFDNCKLLTDECRKKLLQLKEKYYPIEVDPVLTVEEKYPY 89 (277)
T ss_pred heEEeeccCccceeeecCCCCCCcchHhHHhhCCCCCHHHHHHHHHHHhhccceecCCCCChHHhhhH
Confidence 45688999999998542 1 1 1345788888888888887 47777767776654443
No 217
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=80.00 E-value=0.7 Score=40.91 Aligned_cols=30 Identities=13% Similarity=0.233 Sum_probs=25.3
Q ss_pred HHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHH
Q 015439 301 GKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDA 333 (406)
Q Consensus 301 G~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedM 333 (406)
-.....+++.+|++++ .+++|||+..|+.+
T Consensus 142 p~~f~~~~~~~~~~p~---~~l~vgD~~~Di~~ 171 (175)
T TIGR01493 142 PVVYELVFDTVGLPPD---RVLMVAAHQWDLIG 171 (175)
T ss_pred HHHHHHHHHHHCCCHH---HeEeEecChhhHHH
Confidence 5567888899999876 79999999998865
No 218
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=79.67 E-value=0.94 Score=41.70 Aligned_cols=16 Identities=38% Similarity=0.331 Sum_probs=13.5
Q ss_pred cCCEEEEEecCCccCC
Q 015439 115 KKKIAIFSDYDGTLSP 130 (406)
Q Consensus 115 ~k~~lI~lD~DGTL~~ 130 (406)
+..++++||+||||++
T Consensus 4 ~~~~~iiFD~DGTL~d 19 (226)
T PRK13222 4 MDIRAVAFDLDGTLVD 19 (226)
T ss_pred CcCcEEEEcCCccccc
Confidence 3456899999999997
No 219
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=79.59 E-value=1.1 Score=41.99 Aligned_cols=33 Identities=18% Similarity=0.154 Sum_probs=26.4
Q ss_pred HHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHH
Q 015439 302 KAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 302 ~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~ 337 (406)
..-..-+++||++++ .+++|.|+.+.+.+-+.+
T Consensus 146 d~yL~Aa~~Lgv~P~---~CvviEDs~~Gi~Aa~aA 178 (221)
T COG0637 146 DIYLLAAERLGVDPE---ECVVVEDSPAGIQAAKAA 178 (221)
T ss_pred HHHHHHHHHcCCChH---HeEEEecchhHHHHHHHC
Confidence 344555678898886 899999999999888776
No 220
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=78.86 E-value=0.79 Score=41.87 Aligned_cols=26 Identities=27% Similarity=0.330 Sum_probs=17.4
Q ss_pred EEEecCCccCCCCCCCCccCCChhHHHHHHHHHhc
Q 015439 120 IFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKY 154 (406)
Q Consensus 120 I~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~ 154 (406)
|+||+||||++ +. +...++++.+.+.
T Consensus 1 viFD~DGTL~D-----s~----~~~~~~~~~~~~~ 26 (213)
T TIGR01449 1 VLFDLDGTLVD-----SA----PDIAAAVNMALAA 26 (213)
T ss_pred CeecCCCcccc-----CH----HHHHHHHHHHHHH
Confidence 57999999998 21 2345566666554
No 221
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=78.63 E-value=5.5 Score=41.47 Aligned_cols=65 Identities=22% Similarity=0.187 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCce-EEEecCCC----CCccceEEeCCHHHHHHHHHHH
Q 015439 300 KGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGY-GILVSSVP----KETKAFYSLRDPSEVQEFLLSL 374 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~-gVaVgna~----~~t~A~y~l~~~~eV~~fL~~L 374 (406)
|-..+...++.++. + .+++|||+.+|+.+-+.+ |+ .|.+.... ....++|++.+..++.++|..+
T Consensus 387 kP~~~~~al~~l~~--~---~~v~VGDs~~Di~aAk~A-----G~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~~ 456 (459)
T PRK06698 387 KSDLVKSILNKYDI--K---EAAVVGDRLSDINAAKDN-----GLIAIGCNFDFAQEDELAQADIVIDDLLELKGILSTV 456 (459)
T ss_pred CcHHHHHHHHhcCc--c---eEEEEeCCHHHHHHHHHC-----CCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHHHH
Confidence 45677888887764 3 699999999999988886 54 56664322 1135899999999998877543
No 222
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=78.49 E-value=1.5 Score=40.37 Aligned_cols=39 Identities=18% Similarity=0.250 Sum_probs=30.3
Q ss_pred EcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHH
Q 015439 293 RPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 293 ~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~ 337 (406)
+.. +-.|+.+|..|++.+.. . .+++|||+-||++|..-+
T Consensus 154 tsd-sggKa~~i~~lrk~~~~--~---~~~mvGDGatDlea~~pa 192 (227)
T KOG1615|consen 154 TSD-SGGKAEVIALLRKNYNY--K---TIVMVGDGATDLEAMPPA 192 (227)
T ss_pred ccc-CCccHHHHHHHHhCCCh--h---eeEEecCCccccccCCch
Confidence 334 56899999999994333 3 699999999999986653
No 223
>PLN02645 phosphoglycolate phosphatase
Probab=78.22 E-value=7.4 Score=38.32 Aligned_cols=50 Identities=12% Similarity=0.114 Sum_probs=39.8
Q ss_pred CEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHh
Q 015439 117 KIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELV 172 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~ 172 (406)
.++++||+||||.. .. .+-+...++|++|++.+ +++++|+|+......++
T Consensus 28 ~~~~~~D~DGtl~~-----~~-~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~ 78 (311)
T PLN02645 28 VETFIFDCDGVIWK-----GD-KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYG 78 (311)
T ss_pred CCEEEEeCcCCeEe-----CC-ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHH
Confidence 56899999999998 33 34578899999999985 89999999955544443
No 224
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=78.00 E-value=4.1 Score=38.74 Aligned_cols=36 Identities=22% Similarity=0.286 Sum_probs=25.6
Q ss_pred cCCChhHHHHHHHHHh--c-CCEEEEcCCChhhHHHHhC
Q 015439 138 AIMSDGMRSAVRNVAK--Y-FPTAIITGRSRDKVYELVG 173 (406)
Q Consensus 138 ~~~s~~~~~aL~~L~~--~-~~v~I~SGR~~~~l~~~~~ 173 (406)
..+.+.|+++|+.+++ . ..++|+|--.--.+..++.
T Consensus 70 ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~ 108 (234)
T PF06888_consen 70 IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILE 108 (234)
T ss_pred CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHH
Confidence 4566777778888854 2 3788888888777777763
No 225
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=77.68 E-value=2.3 Score=40.85 Aligned_cols=49 Identities=14% Similarity=0.216 Sum_probs=28.3
Q ss_pred HHHHHHHHHcCCCCCCCccEEEEeCCc----CCHHHHHHHHhC-C--CceEEEecCCC
Q 015439 302 KAVEFLLESLGLSDSDDVLPIYIGDDR----TDEDAFKVLRKG-N--RGYGILVSSVP 352 (406)
Q Consensus 302 ~Al~~Ll~~lg~~~~~~~~viaiGD~~----NDedMf~~~~~~-~--~G~gVaVgna~ 352 (406)
..++.+++++|+... ...+..||+. -|-++|..+-++ + ..-.+.||...
T Consensus 137 ~~~~~~l~~~gl~~~--Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~ 192 (260)
T PLN03243 137 RYLERAIEAVGMEGF--FSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSN 192 (260)
T ss_pred HHHHHHHHHcCCHhh--CcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEEEcCCH
Confidence 556778888888642 1244545543 377787765432 1 12356777653
No 226
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=77.23 E-value=2.2 Score=49.10 Aligned_cols=33 Identities=21% Similarity=0.323 Sum_probs=28.3
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~ 337 (406)
.|+..++.+.+..+. .+++|||+-||..|++.+
T Consensus 781 QKA~Vv~lVk~~~~~------~TLAIGDGANDVsMIQ~A 813 (1151)
T KOG0206|consen 781 QKALVVKLVKKGLKA------VTLAIGDGANDVSMIQEA 813 (1151)
T ss_pred HHHHHHHHHHhcCCc------eEEEeeCCCccchheeeC
Confidence 899999888655553 699999999999999986
No 227
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=75.87 E-value=1.3 Score=46.11 Aligned_cols=29 Identities=24% Similarity=0.345 Sum_probs=19.9
Q ss_pred EEEEEecCCccCCCCCCCCccCCChhHHHHHHHH
Q 015439 118 IAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNV 151 (406)
Q Consensus 118 ~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L 151 (406)
+.++||+||||++ +.........++++++
T Consensus 242 k~vIFDlDGTLiD-----s~~~~~~a~~~~~~~~ 270 (459)
T PRK06698 242 QALIFDMDGTLFQ-----TDKILELSLDDTFDHL 270 (459)
T ss_pred hheeEccCCceec-----chhHHHHHHHHHHHHH
Confidence 5789999999998 3334445555555554
No 228
>PRK09449 dUMP phosphatase; Provisional
Probab=75.82 E-value=1.5 Score=40.60 Aligned_cols=35 Identities=26% Similarity=0.250 Sum_probs=20.8
Q ss_pred HHHHHHHHHcCCCCCCCccEEEEeCC----cCCHHHHHHHH
Q 015439 302 KAVEFLLESLGLSDSDDVLPIYIGDD----RTDEDAFKVLR 338 (406)
Q Consensus 302 ~Al~~Ll~~lg~~~~~~~~viaiGD~----~NDedMf~~~~ 338 (406)
..++..++++|+... ++.+ +.+++ --|-++|..+-
T Consensus 122 ~~~~~~l~~~~l~~~-fd~v-~~~~~~~~~KP~p~~~~~~~ 160 (224)
T PRK09449 122 ELQQVRLERTGLRDY-FDLL-VISEQVGVAKPDVAIFDYAL 160 (224)
T ss_pred HHHHHHHHhCChHHH-cCEE-EEECccCCCCCCHHHHHHHH
Confidence 345667888887642 2234 44543 35888888753
No 229
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=75.70 E-value=2.3 Score=37.89 Aligned_cols=47 Identities=21% Similarity=0.248 Sum_probs=34.0
Q ss_pred CEEEEEecCCccCCCCC------CCCccCCChhHHHHHHHHHhcC-CEEEEcCC
Q 015439 117 KIAIFSDYDGTLSPIVD------DPDRAIMSDGMRSAVRNVAKYF-PTAIITGR 163 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~~~------~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR 163 (406)
++++|||.||||..... .++.-.+-+.+.++|+.|.+++ +++|+|-.
T Consensus 1 ~~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred CCEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 36789999999987211 1122345578999999999884 88888864
No 230
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=73.99 E-value=4.7 Score=33.91 Aligned_cols=36 Identities=28% Similarity=0.288 Sum_probs=30.8
Q ss_pred CHHHHHHHHHHHc-CCCCCCCccEEEEeC-CcCCHHHHHHH
Q 015439 299 NKGKAVEFLLESL-GLSDSDDVLPIYIGD-DRTDEDAFKVL 337 (406)
Q Consensus 299 sKG~Al~~Ll~~l-g~~~~~~~~viaiGD-~~NDedMf~~~ 337 (406)
-|...++.+++.+ +++++ ++++||| ..+|+.+-+.+
T Consensus 86 P~~~~~~~~~~~~~~~~~~---~~v~IGD~~~~Di~~A~~~ 123 (132)
T TIGR01662 86 PKPGMFLEALKRFNEIDPE---ESVYVGDQDLTDLQAAKRA 123 (132)
T ss_pred CChHHHHHHHHHcCCCChh---heEEEcCCCcccHHHHHHC
Confidence 4678999999999 59876 7999999 79998887775
No 231
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=73.97 E-value=1.8 Score=39.25 Aligned_cols=35 Identities=17% Similarity=0.299 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHH
Q 015439 300 KGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~ 337 (406)
+....+.+++.+|++++ .+++|||+.+|+.+-+.+
T Consensus 150 ~~~~~~~~~~~~~~~p~---~~~~vgD~~~Di~~A~~~ 184 (198)
T TIGR01428 150 APQVYQLALEALGVPPD---EVLFVASNPWDLGGAKKF 184 (198)
T ss_pred CHHHHHHHHHHhCCChh---hEEEEeCCHHHHHHHHHC
Confidence 35678999999999876 799999999998886665
No 232
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=73.07 E-value=6.1 Score=36.46 Aligned_cols=35 Identities=17% Similarity=0.261 Sum_probs=29.3
Q ss_pred cCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHh
Q 015439 138 AIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELV 172 (406)
Q Consensus 138 ~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~ 172 (406)
..+++..++.+..|++.+ .|+++||-=+..+....
T Consensus 87 ~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va 122 (227)
T KOG1615|consen 87 PTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVA 122 (227)
T ss_pred CccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHH
Confidence 568899999999999985 89999998887766554
No 233
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=73.03 E-value=3.6 Score=36.50 Aligned_cols=28 Identities=21% Similarity=0.288 Sum_probs=20.0
Q ss_pred EEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC
Q 015439 119 AIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF 155 (406)
Q Consensus 119 lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~ 155 (406)
+|+||+||||++ . .+....+++++.+..
T Consensus 1 ~iiFD~DGTL~d-----s----~~~~~~~~~~~~~~~ 28 (185)
T TIGR01990 1 AVIFDLDGVITD-----T----AEYHYLAWKALADEL 28 (185)
T ss_pred CeEEcCCCcccc-----C----hHHHHHHHHHHHHHc
Confidence 378999999998 2 235666777776653
No 234
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=72.37 E-value=4.8 Score=38.92 Aligned_cols=42 Identities=24% Similarity=0.252 Sum_probs=31.6
Q ss_pred HHHHHHHHHHcCCCCCCCccEEEEeCC-cCCHHHHHHHHhCCCce-EEEecC
Q 015439 301 GKAVEFLLESLGLSDSDDVLPIYIGDD-RTDEDAFKVLRKGNRGY-GILVSS 350 (406)
Q Consensus 301 G~Al~~Ll~~lg~~~~~~~~viaiGD~-~NDedMf~~~~~~~~G~-gVaVgn 350 (406)
...++.+++++|++++ .+++|||+ .+|+.+=+.+ |+ +|.|..
T Consensus 205 p~~~~~~~~~~~~~~~---~~lmIGD~~~tDI~~A~~a-----Gi~si~V~~ 248 (279)
T TIGR01452 205 PYMFECITENFSIDPA---RTLMVGDRLETDILFGHRC-----GMTTVLVLS 248 (279)
T ss_pred HHHHHHHHHHhCCChh---hEEEECCChHHHHHHHHHc-----CCcEEEECC
Confidence 4467888899998876 79999999 5999876654 43 566643
No 235
>PLN02940 riboflavin kinase
Probab=72.09 E-value=1.9 Score=43.97 Aligned_cols=61 Identities=21% Similarity=0.091 Sum_probs=45.0
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCce-EEEecCCCC----CccceEEeCCHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGY-GILVSSVPK----ETKAFYSLRDPSEV 367 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~-gVaVgna~~----~t~A~y~l~~~~eV 367 (406)
-+...+..+++.+|++++ .+++|||+.+|+.+=+.+ |+ .|.|..... ...|++.+++..++
T Consensus 151 P~p~~~~~a~~~lgv~p~---~~l~VGDs~~Di~aA~~a-----Gi~~I~v~~g~~~~~~~~~ad~~i~sl~el 216 (382)
T PLN02940 151 PSPDIFLEAAKRLNVEPS---NCLVIEDSLPGVMAGKAA-----GMEVIAVPSIPKQTHLYSSADEVINSLLDL 216 (382)
T ss_pred CCHHHHHHHHHHcCCChh---HEEEEeCCHHHHHHHHHc-----CCEEEEECCCCcchhhccCccEEeCCHhHc
Confidence 456789999999999876 799999999998876665 54 455654321 24577788877764
No 236
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=71.25 E-value=5.2 Score=33.92 Aligned_cols=35 Identities=11% Similarity=0.188 Sum_probs=30.0
Q ss_pred CHHHHHHHHHHHcC--CCCCCCccEEEEeCCcCCHHHHHH
Q 015439 299 NKGKAVEFLLESLG--LSDSDDVLPIYIGDDRTDEDAFKV 336 (406)
Q Consensus 299 sKG~Al~~Ll~~lg--~~~~~~~~viaiGD~~NDedMf~~ 336 (406)
.|...+..+++++| +.++ .+++|||+..|.+-++.
T Consensus 90 pkp~~~~~a~~~lg~~~~p~---~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 90 PKSPRLVEIALKLNGVLKPK---SILFVDDRPDNNEEVDY 126 (128)
T ss_pred cHHHHHHHHHHHhcCCCCcc---eEEEECCCHhHHHHHHh
Confidence 57889999999999 8876 79999999999776654
No 237
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=70.84 E-value=2.3 Score=37.93 Aligned_cols=11 Identities=45% Similarity=0.899 Sum_probs=10.2
Q ss_pred EEEecCCccCC
Q 015439 120 IFSDYDGTLSP 130 (406)
Q Consensus 120 I~lD~DGTL~~ 130 (406)
++||+||||+.
T Consensus 1 v~fD~DGTL~~ 11 (192)
T PF12710_consen 1 VIFDFDGTLTD 11 (192)
T ss_dssp EEEESBTTTBS
T ss_pred eEEecCcCeec
Confidence 58999999998
No 238
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=70.79 E-value=11 Score=35.29 Aligned_cols=15 Identities=33% Similarity=0.277 Sum_probs=13.2
Q ss_pred CCEEEEEecCCccCC
Q 015439 116 KKIAIFSDYDGTLSP 130 (406)
Q Consensus 116 k~~lI~lD~DGTL~~ 130 (406)
+.++|+||+||||++
T Consensus 9 ~~k~iiFDlDGTL~D 23 (238)
T PRK10748 9 RISALTFDLDDTLYD 23 (238)
T ss_pred CceeEEEcCcccccC
Confidence 357899999999998
No 239
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=70.40 E-value=2.4 Score=38.72 Aligned_cols=34 Identities=18% Similarity=0.336 Sum_probs=28.6
Q ss_pred HHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHH
Q 015439 301 GKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 301 G~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~ 337 (406)
....+.+++.+|++++ .+++|||...|+.+=+.+
T Consensus 155 p~~~~~~~~~~g~~~~---~~l~i~D~~~di~aA~~a 188 (211)
T TIGR02247 155 PRIYQLMLERLGVAPE---ECVFLDDLGSNLKPAAAL 188 (211)
T ss_pred HHHHHHHHHHcCCCHH---HeEEEcCCHHHHHHHHHc
Confidence 5578899999999876 799999999998876665
No 240
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=69.74 E-value=7.8 Score=43.05 Aligned_cols=37 Identities=22% Similarity=0.224 Sum_probs=28.4
Q ss_pred cEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCC---CccceEEe
Q 015439 320 LPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPK---ETKAFYSL 361 (406)
Q Consensus 320 ~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~---~t~A~y~l 361 (406)
-|...||+.||-++++.+ ..|||||=+-- +..|+-+|
T Consensus 707 iVaVTGDGVNDsPALKKA-----DIGVAMGiaGSDvsKqAADmIL 746 (1019)
T KOG0203|consen 707 IVAVTGDGVNDSPALKKA-----DIGVAMGIAGSDVSKQAADMIL 746 (1019)
T ss_pred EEEEeCCCcCCChhhccc-----ccceeeccccchHHHhhcceEE
Confidence 467789999999999997 69999975432 34566665
No 241
>PRK10444 UMP phosphatase; Provisional
Probab=69.63 E-value=13 Score=35.34 Aligned_cols=62 Identities=16% Similarity=0.040 Sum_probs=44.5
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCc-CCHHHHHHHHhCCCceEEEecCCCC--------CccceEEeCCHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDR-TDEDAFKVLRKGNRGYGILVSSVPK--------ETKAFYSLRDPSEV 367 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~-NDedMf~~~~~~~~G~gVaVgna~~--------~t~A~y~l~~~~eV 367 (406)
-+...++.++++++++.+ .+++|||+. +|+.+=+.++ -.+|.|..+.- +..++|++++..++
T Consensus 175 P~~~~~~~~~~~~~~~~~---~~v~IGD~~~tDi~~A~~~G----~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 175 PSPWIIRAALNKMQAHSE---ETVIVGDNLRTDILAGFQAG----LETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred CCHHHHHHHHHHcCCCcc---cEEEECCCcHHHHHHHHHcC----CCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 456778899999998776 799999996 8998877752 24667754321 13477888887664
No 242
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=69.45 E-value=4.1 Score=35.27 Aligned_cols=36 Identities=25% Similarity=0.254 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~ 337 (406)
-|...++.+++.+|++++ .+++|||+..|+.+=+.+
T Consensus 102 P~~~~~~~~~~~~~~~~~---e~i~IGDs~~Di~~A~~~ 137 (147)
T TIGR01656 102 PKPGLILEALKRLGVDAS---RSLVVGDRLRDLQAARNA 137 (147)
T ss_pred CCHHHHHHHHHHcCCChH---HEEEEcCCHHHHHHHHHC
Confidence 467789999999999876 799999998887665554
No 243
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=67.81 E-value=2.9 Score=37.78 Aligned_cols=49 Identities=10% Similarity=0.175 Sum_probs=27.5
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeC--CcCCHHHHHHHHhCC--CceEEEecCC
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGD--DRTDEDAFKVLRKGN--RGYGILVSSV 351 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD--~~NDedMf~~~~~~~--~G~gVaVgna 351 (406)
+.-..+..+++.+|+.. ..++-+. ...+.-+++.++..+ .+..+.||.+
T Consensus 152 D~~~~a~~~~~~lgi~~----~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg 204 (215)
T PF00702_consen 152 DNESTASAIAKQLGIFD----SIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDG 204 (215)
T ss_dssp SEHHHHHHHHHHTTSCS----EEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESS
T ss_pred ccccccccccccccccc----ccccccccccccchhHHHHHHHHhcCCCEEEEEccC
Confidence 34456688899999953 3444444 555653344444433 2445566654
No 244
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=67.80 E-value=16 Score=33.37 Aligned_cols=65 Identities=22% Similarity=0.374 Sum_probs=44.9
Q ss_pred HHHHHHHHHHcCCCCCCCccEEEEeCC-cCCHHHHHHHHhCCCc-eEEEecCCCCC-----ccceEEeCCHHHHHHHHHH
Q 015439 301 GKAVEFLLESLGLSDSDDVLPIYIGDD-RTDEDAFKVLRKGNRG-YGILVSSVPKE-----TKAFYSLRDPSEVQEFLLS 373 (406)
Q Consensus 301 G~Al~~Ll~~lg~~~~~~~~viaiGD~-~NDedMf~~~~~~~~G-~gVaVgna~~~-----t~A~y~l~~~~eV~~fL~~ 373 (406)
-..-+..++.+|++++ .+++|||+ .||+..-+.+ | .+|.+...... ....+.+.+-.++.+.+..
T Consensus 157 ~~~f~~~~~~~g~~p~---~~l~VgD~~~~di~gA~~~-----G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~~~ 228 (229)
T COG1011 157 PEIFEYALEKLGVPPE---EALFVGDSLENDILGARAL-----GMKTVWINRGGKPLPDALEAPDYEISSLAELLDLLER 228 (229)
T ss_pred cHHHHHHHHHcCCCcc---eEEEECCChhhhhHHHHhc-----CcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHHhh
Confidence 3577899999999876 79999997 5775555554 4 35566543221 3577777888888777653
No 245
>PLN02940 riboflavin kinase
Probab=67.69 E-value=9.9 Score=38.71 Aligned_cols=30 Identities=17% Similarity=0.132 Sum_probs=20.6
Q ss_pred CCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhc
Q 015439 116 KKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKY 154 (406)
Q Consensus 116 k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~ 154 (406)
+-++|+||+||||++ .. +...++++.+.+.
T Consensus 10 ~ik~VIFDlDGTLvD-----t~----~~~~~a~~~~~~~ 39 (382)
T PLN02940 10 LVSHVILDLDGTLLN-----TD----GIVSDVLKAFLVK 39 (382)
T ss_pred cCCEEEECCcCcCCc-----CH----HHHHHHHHHHHHH
Confidence 356789999999998 22 3455666666554
No 246
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=67.68 E-value=13 Score=35.11 Aligned_cols=60 Identities=18% Similarity=0.230 Sum_probs=40.1
Q ss_pred hccCCEEEEEecCCccCCCCCCC-------C------------------------------------------ccCCChh
Q 015439 113 AKKKKIAIFSDYDGTLSPIVDDP-------D------------------------------------------RAIMSDG 143 (406)
Q Consensus 113 ~~~k~~lI~lD~DGTL~~~~~~p-------~------------------------------------------~~~~s~~ 143 (406)
..+.++|++||+|-|++...+|. . .-.+.|.
T Consensus 9 ~~~~ril~~FDFD~TIid~dSD~wVv~~lp~~~l~~qL~~t~p~~~Wne~M~rv~k~Lheqgv~~~~ik~~~r~iP~~Pg 88 (256)
T KOG3120|consen 9 SSSPRILLVFDFDRTIIDQDSDNWVVDELPTTDLFNQLRDTYPKGFWNELMDRVFKELHEQGVRIAEIKQVLRSIPIVPG 88 (256)
T ss_pred ccCCcEEEEEecCceeecCCcchHHHHhcccchhHHHHHHhcccchHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCCCcc
Confidence 45578999999999999744321 0 1345566
Q ss_pred HHHHHHHHHhcC--CEEEEcCCChhhHHHHh
Q 015439 144 MRSAVRNVAKYF--PTAIITGRSRDKVYELV 172 (406)
Q Consensus 144 ~~~aL~~L~~~~--~v~I~SGR~~~~l~~~~ 172 (406)
|.++++.+++.+ .++|+|--.--.+..++
T Consensus 89 mv~lik~~ak~g~~eliIVSDaNsfFIe~~L 119 (256)
T KOG3120|consen 89 MVRLIKSAAKLGCFELIIVSDANSFFIEEIL 119 (256)
T ss_pred HHHHHHHHHhCCCceEEEEecCchhHHHHHH
Confidence 777777777663 57777776666666655
No 247
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=67.66 E-value=15 Score=33.55 Aligned_cols=81 Identities=16% Similarity=0.139 Sum_probs=53.7
Q ss_pred hhhHHhhCCccchhHHHHHHHhccC-CEEEEEecCCccCCCCC---------CC-------------------CccCCCh
Q 015439 92 YCSWMLKYPSALKYFEKIMSEAKKK-KIAIFSDYDGTLSPIVD---------DP-------------------DRAIMSD 142 (406)
Q Consensus 92 ~~~w~~~~p~~L~~f~~i~~~~~~k-~~lI~lD~DGTL~~~~~---------~p-------------------~~~~~s~ 142 (406)
...-..+-|-.+=+.++|..-..|+ .+.+-||+|.|++-... .| ++-.++.
T Consensus 37 a~~l~~qa~ihwiSvaqI~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPK 116 (237)
T COG3700 37 AARLAEQAPIHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPK 116 (237)
T ss_pred HHHHhhhCCeeEEEHHHHHhhhcCCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchH
Confidence 3445566777777889998755555 56788999999984210 01 2344666
Q ss_pred hHHHHHHHHHhc-C-CEEEEcCCChhhHHHHh
Q 015439 143 GMRSAVRNVAKY-F-PTAIITGRSRDKVYELV 172 (406)
Q Consensus 143 ~~~~aL~~L~~~-~-~v~I~SGR~~~~l~~~~ 172 (406)
+....|-.+..+ + .++++|||+..++...-
T Consensus 117 evA~qLI~MHq~RGD~i~FvTGRt~gk~d~vs 148 (237)
T COG3700 117 EVARQLIDMHQRRGDAIYFVTGRTPGKTDTVS 148 (237)
T ss_pred HHHHHHHHHHHhcCCeEEEEecCCCCcccccc
Confidence 655555555554 5 79999999998665443
No 248
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=67.05 E-value=6.1 Score=34.98 Aligned_cols=28 Identities=21% Similarity=0.209 Sum_probs=19.8
Q ss_pred EEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhc
Q 015439 118 IAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKY 154 (406)
Q Consensus 118 ~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~ 154 (406)
++|+||+||||++ .. +....+++++.+.
T Consensus 2 ~~iiFD~DGTL~d-----s~----~~~~~~~~~~~~~ 29 (185)
T TIGR02009 2 KAVIFDMDGVIVD-----TA----PLHAQAWKHLADK 29 (185)
T ss_pred CeEEEcCCCcccC-----Ch----HHHHHHHHHHHHH
Confidence 5789999999998 22 3455666666655
No 249
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=66.81 E-value=3.5 Score=37.85 Aligned_cols=36 Identities=25% Similarity=0.134 Sum_probs=24.7
Q ss_pred HHHHHHHHcCCCCCCCccEEEEeCCc---CCHHHHHHHHh
Q 015439 303 AVEFLLESLGLSDSDDVLPIYIGDDR---TDEDAFKVLRK 339 (406)
Q Consensus 303 Al~~Ll~~lg~~~~~~~~viaiGD~~---NDedMf~~~~~ 339 (406)
..+..++.+|+.. -++.+++.++-. =|-.+|+.+-+
T Consensus 127 ~~~~~l~~~gl~~-~Fd~v~~s~~~g~~KP~~~~f~~~~~ 165 (229)
T COG1011 127 HQERKLRQLGLLD-YFDAVFISEDVGVAKPDPEIFEYALE 165 (229)
T ss_pred HHHHHHHHcCChh-hhheEEEecccccCCCCcHHHHHHHH
Confidence 3467778888654 245677777732 39999999854
No 250
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=65.94 E-value=7.7 Score=38.43 Aligned_cols=41 Identities=22% Similarity=0.242 Sum_probs=32.1
Q ss_pred cCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhc-----CCEEEEc
Q 015439 115 KKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKY-----FPTAIIT 161 (406)
Q Consensus 115 ~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~-----~~v~I~S 161 (406)
.+..-|+||+||.|+. ...+-++..+||+.|.++ +|+++.|
T Consensus 33 ~~~fgfafDIDGVL~R------G~~~i~~~~~Alr~L~~~~g~lkIP~vfLT 78 (389)
T KOG1618|consen 33 PPTFGFAFDIDGVLFR------GHRPIPGALKALRRLVDNQGQLKIPFVFLT 78 (389)
T ss_pred CCceeEEEecccEEEe------cCCCCcchHHHHHHHHhcCCCeeccEEEEe
Confidence 3456799999999997 345667889999999987 2677666
No 251
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=65.58 E-value=24 Score=33.84 Aligned_cols=37 Identities=19% Similarity=0.446 Sum_probs=30.3
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHH
Q 015439 297 DWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKV 336 (406)
Q Consensus 297 gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~ 336 (406)
|.+||.++..+++.+|..++ .+|+|-|+.-.+.-++.
T Consensus 160 ~~~KG~~L~~fL~~~~~~pk---~IIfIDD~~~nl~sv~~ 196 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQSPK---KIIFIDDNKENLKSVEK 196 (252)
T ss_pred CCccHHHHHHHHHHcCCCCC---eEEEEeCCHHHHHHHHH
Confidence 78999999999999998876 79999998655444333
No 252
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=65.08 E-value=2.9 Score=36.87 Aligned_cols=34 Identities=21% Similarity=0.265 Sum_probs=28.8
Q ss_pred HHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHH
Q 015439 301 GKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 301 G~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~ 337 (406)
....+.+++.+|++++ .+++|||+..|+.+=+.+
T Consensus 143 ~~~~~~~~~~~~~~~~---~~~~vgD~~~di~aA~~~ 176 (183)
T TIGR01509 143 PDIYLLALKKLGLKPE---ECLFVDDSPAGIEAAKAA 176 (183)
T ss_pred HHHHHHHHHHcCCCcc---eEEEEcCCHHHHHHHHHc
Confidence 6778999999999875 799999999988776665
No 253
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=65.07 E-value=7.3 Score=33.46 Aligned_cols=36 Identities=28% Similarity=0.376 Sum_probs=31.2
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~ 337 (406)
.+..+.+.+++.+|++++ .+++|||+..|+.+-+.+
T Consensus 134 p~~~~~~~~~~~~~~~p~---~~~~vgD~~~d~~~A~~~ 169 (176)
T PF13419_consen 134 PDPDAYRRALEKLGIPPE---EILFVGDSPSDVEAAKEA 169 (176)
T ss_dssp TSHHHHHHHHHHHTSSGG---GEEEEESSHHHHHHHHHT
T ss_pred hHHHHHHHHHHHcCCCcc---eEEEEeCCHHHHHHHHHc
Confidence 456889999999999876 799999999998887775
No 254
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=65.00 E-value=8.4 Score=34.96 Aligned_cols=35 Identities=17% Similarity=0.388 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHH
Q 015439 300 KGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~ 337 (406)
+....+.+++.+|++++ .+++|||+..|+.+=+.+
T Consensus 143 ~p~~~~~~~~~~~~~p~---~~l~vgD~~~di~aA~~a 177 (199)
T PRK09456 143 EARIYQHVLQAEGFSAA---DAVFFDDNADNIEAANAL 177 (199)
T ss_pred CHHHHHHHHHHcCCChh---HeEEeCCCHHHHHHHHHc
Confidence 46778899999999886 799999998886554443
No 255
>PHA02597 30.2 hypothetical protein; Provisional
Probab=64.33 E-value=10 Score=34.22 Aligned_cols=14 Identities=43% Similarity=0.617 Sum_probs=12.3
Q ss_pred CEEEEEecCCccCC
Q 015439 117 KIAIFSDYDGTLSP 130 (406)
Q Consensus 117 ~~lI~lD~DGTL~~ 130 (406)
.++|+||+||||++
T Consensus 2 ~k~viFDlDGTLiD 15 (197)
T PHA02597 2 KPTILTDVDGVLLS 15 (197)
T ss_pred CcEEEEecCCceEc
Confidence 46788999999998
No 256
>PRK08238 hypothetical protein; Validated
Probab=64.22 E-value=6.2 Score=41.53 Aligned_cols=41 Identities=24% Similarity=0.323 Sum_probs=30.4
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCC
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVP 352 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~ 352 (406)
.|.. .+.+.++.. .++++||+.+|.+|++.+ |.+|+|+..+
T Consensus 128 ~K~~---~l~~~l~~~-----~~~yvGDS~~Dlp~~~~A-----~~av~Vn~~~ 168 (479)
T PRK08238 128 AKAA---ALVEAFGER-----GFDYAGNSAADLPVWAAA-----RRAIVVGASP 168 (479)
T ss_pred hHHH---HHHHHhCcc-----CeeEecCCHHHHHHHHhC-----CCeEEECCCH
Confidence 4644 444666532 368899999999999997 6899998654
No 257
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=64.19 E-value=12 Score=32.89 Aligned_cols=11 Identities=45% Similarity=0.652 Sum_probs=10.3
Q ss_pred EEEecCCccCC
Q 015439 120 IFSDYDGTLSP 130 (406)
Q Consensus 120 I~lD~DGTL~~ 130 (406)
++||+||||++
T Consensus 2 vlFDlDgtLv~ 12 (183)
T TIGR01509 2 ILFDLDGVLVD 12 (183)
T ss_pred eeeccCCceec
Confidence 78999999998
No 258
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=64.03 E-value=6.3 Score=36.24 Aligned_cols=49 Identities=18% Similarity=0.126 Sum_probs=26.9
Q ss_pred HHHHHHHHcCCCCCCCccEEEEeCCc----CCHHHHHHHHhC-CC--ceEEEecCCC
Q 015439 303 AVEFLLESLGLSDSDDVLPIYIGDDR----TDEDAFKVLRKG-NR--GYGILVSSVP 352 (406)
Q Consensus 303 Al~~Ll~~lg~~~~~~~~viaiGD~~----NDedMf~~~~~~-~~--G~gVaVgna~ 352 (406)
.++.+++.+|+... ++..++.|++. .+-++|..+-+. +. .=.+.||..+
T Consensus 114 ~~~~~l~~~~l~~~-F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~igDs~ 169 (221)
T PRK10563 114 KMQHSLGKTGMLHY-FPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCILVDDSS 169 (221)
T ss_pred HHHHHHHhcChHHh-CcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEEEeCcH
Confidence 46778888888642 11245555432 466777665332 11 1246677644
No 259
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=63.35 E-value=5.7 Score=35.98 Aligned_cols=35 Identities=14% Similarity=0.082 Sum_probs=20.6
Q ss_pred HHHHHHHHHcCCCCCCCccEEEEeCC---cCCHHHHHHHH
Q 015439 302 KAVEFLLESLGLSDSDDVLPIYIGDD---RTDEDAFKVLR 338 (406)
Q Consensus 302 ~Al~~Ll~~lg~~~~~~~~viaiGD~---~NDedMf~~~~ 338 (406)
..++.+++.+|+... + ..++.+|+ --|-++|..+-
T Consensus 134 ~~~~~~l~~~gl~~~-f-~~~~~~~~~~~KP~p~~~~~~~ 171 (197)
T TIGR01548 134 KDAAKFLTTHGLEIL-F-PVQIWMEDCPPKPNPEPLILAA 171 (197)
T ss_pred HHHHHHHHHcCchhh-C-CEEEeecCCCCCcCHHHHHHHH
Confidence 456788899998642 2 23444443 24566666653
No 260
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=63.21 E-value=6.7 Score=33.73 Aligned_cols=27 Identities=33% Similarity=0.373 Sum_probs=18.6
Q ss_pred EEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhc
Q 015439 119 AIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKY 154 (406)
Q Consensus 119 lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~ 154 (406)
+|+||+||||++ +. +....+++++.+.
T Consensus 1 ~iifD~DGTL~d-----~~----~~~~~~~~~~~~~ 27 (154)
T TIGR01549 1 AILFDIDGTLVD-----SS----FAIRRAFEETLEE 27 (154)
T ss_pred CeEecCCCcccc-----cH----HHHHHHHHHHHHH
Confidence 378999999998 22 3455666666554
No 261
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=63.03 E-value=7.6 Score=36.49 Aligned_cols=54 Identities=19% Similarity=0.185 Sum_probs=37.8
Q ss_pred HHHHHHHHHHcCCC-CCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCCCccceEEe
Q 015439 301 GKAVEFLLESLGLS-DSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPKETKAFYSL 361 (406)
Q Consensus 301 G~Al~~Ll~~lg~~-~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~~t~A~y~l 361 (406)
-.|.++.++..|++ +. .+++|-||.+-+..=+.+ .-.+|.|+...+..-++|.+
T Consensus 163 ~~afE~a~k~agi~~p~---~t~FfDDS~~NI~~ak~v----Gl~tvlv~~~~~~~~~d~~l 217 (244)
T KOG3109|consen 163 EEAFEKAMKVAGIDSPR---NTYFFDDSERNIQTAKEV----GLKTVLVGREHKIKGVDYAL 217 (244)
T ss_pred HHHHHHHHHHhCCCCcC---ceEEEcCchhhHHHHHhc----cceeEEEEeeecccchHHHH
Confidence 46889999999998 44 799999998877655554 13578888654443444444
No 262
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=62.98 E-value=14 Score=35.22 Aligned_cols=43 Identities=26% Similarity=0.224 Sum_probs=31.0
Q ss_pred hhhhhhHH-hhCCccchhHHHHHHHhccCCEEEEEecCCccCCC
Q 015439 89 DIAYCSWM-LKYPSALKYFEKIMSEAKKKKIAIFSDYDGTLSPI 131 (406)
Q Consensus 89 ~~~~~~w~-~~~p~~L~~f~~i~~~~~~k~~lI~lD~DGTL~~~ 131 (406)
+.+|++.. ..+-+|=..|+.-....++|++.|++|+|-|.++-
T Consensus 50 s~E~~AL~~Q~yn~Ak~~~d~~~k~~k~K~~aVvlDlDETvLdN 93 (274)
T COG2503 50 SAEYQALYLQAYNSAKIALDTQAKKKKGKKKAVVLDLDETVLDN 93 (274)
T ss_pred hHHHHHHHHHHhhhHHHHHHhhhccccCCCceEEEecchHhhcC
Confidence 34444432 33555666777666788999999999999999983
No 263
>PLN02811 hydrolase
Probab=62.70 E-value=13 Score=34.34 Aligned_cols=44 Identities=9% Similarity=-0.013 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHcC---CCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecC
Q 015439 300 KGKAVEFLLESLG---LSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSS 350 (406)
Q Consensus 300 KG~Al~~Ll~~lg---~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgn 350 (406)
+-......++++| +.++ .+++|||+..|+.+=+.+. -..|.|..
T Consensus 139 ~p~~~~~a~~~~~~~~~~~~---~~v~IgDs~~di~aA~~aG----~~~i~v~~ 185 (220)
T PLN02811 139 APDIFLAAARRFEDGPVDPG---KVLVFEDAPSGVEAAKNAG----MSVVMVPD 185 (220)
T ss_pred CcHHHHHHHHHhCCCCCCcc---ceEEEeccHhhHHHHHHCC----CeEEEEeC
Confidence 4557788888886 7765 7999999999988877751 23555644
No 264
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=59.85 E-value=10 Score=34.21 Aligned_cols=36 Identities=11% Similarity=0.146 Sum_probs=21.1
Q ss_pred HHHHHHHHHcCCCCCCCccEEEEeC---CcCCHHHHHHHH
Q 015439 302 KAVEFLLESLGLSDSDDVLPIYIGD---DRTDEDAFKVLR 338 (406)
Q Consensus 302 ~Al~~Ll~~lg~~~~~~~~viaiGD---~~NDedMf~~~~ 338 (406)
..++.+++.+|+... ++.+++.++ .--|-++|+.+-
T Consensus 120 ~~~~~~l~~~gl~~~-fd~i~~s~~~~~~KP~~~~~~~~~ 158 (198)
T TIGR01428 120 AMLKSLVKHAGLDDP-FDAVLSADAVRAYKPAPQVYQLAL 158 (198)
T ss_pred HHHHHHHHHCCChhh-hheeEehhhcCCCCCCHHHHHHHH
Confidence 346677888887532 223444333 234888888764
No 265
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=59.48 E-value=5.3 Score=36.26 Aligned_cols=13 Identities=15% Similarity=0.171 Sum_probs=11.6
Q ss_pred EEEEecCCccCCC
Q 015439 119 AIFSDYDGTLSPI 131 (406)
Q Consensus 119 lI~lD~DGTL~~~ 131 (406)
+|+||+||||++.
T Consensus 2 ~viFDldgvL~d~ 14 (199)
T PRK09456 2 LYIFDLGNVIVDI 14 (199)
T ss_pred EEEEeCCCccccC
Confidence 6899999999983
No 266
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=58.59 E-value=6.2 Score=29.63 Aligned_cols=27 Identities=26% Similarity=0.557 Sum_probs=23.7
Q ss_pred HHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHH
Q 015439 303 AVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKV 336 (406)
Q Consensus 303 Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~ 336 (406)
-|+.|++.+|+ +++|||-.-|++|++.
T Consensus 6 DVqQlLK~~G~-------ivyfg~r~~~iemm~~ 32 (68)
T COG4483 6 DVQQLLKKFGI-------IVYFGKRLYDIEMMQI 32 (68)
T ss_pred HHHHHHHHCCe-------eeecCCHHHHHHHHHH
Confidence 47889999994 8999999999999876
No 267
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=57.72 E-value=31 Score=36.20 Aligned_cols=69 Identities=19% Similarity=0.204 Sum_probs=46.3
Q ss_pred HHHHHHHhcc-CCEEEEEecCCccCCCC--CCC-CccCCC--------hhHHHHHHHHHhcC-CEEEEcCCChhhHHHHh
Q 015439 106 FEKIMSEAKK-KKIAIFSDYDGTLSPIV--DDP-DRAIMS--------DGMRSAVRNVAKYF-PTAIITGRSRDKVYELV 172 (406)
Q Consensus 106 f~~i~~~~~~-k~~lI~lD~DGTL~~~~--~~p-~~~~~s--------~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~ 172 (406)
-..+++...| .++.+++|+|+||...+ ++- +.-.++ .+..+-+..|.+.+ -++|||=.....+.+.|
T Consensus 210 i~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF 289 (574)
T COG3882 210 IASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVF 289 (574)
T ss_pred HHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHH
Confidence 3455544444 45789999999999732 111 112233 45666777777775 68999999999999988
Q ss_pred CC
Q 015439 173 GL 174 (406)
Q Consensus 173 ~l 174 (406)
..
T Consensus 290 ~k 291 (574)
T COG3882 290 RK 291 (574)
T ss_pred hh
Confidence 54
No 268
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=57.49 E-value=6 Score=35.87 Aligned_cols=14 Identities=36% Similarity=0.463 Sum_probs=10.4
Q ss_pred CEE-EEEecCCccCC
Q 015439 117 KIA-IFSDYDGTLSP 130 (406)
Q Consensus 117 ~~l-I~lD~DGTL~~ 130 (406)
+++ |++|+||||.+
T Consensus 1 ~~i~I~iDiDgVLad 15 (191)
T PF06941_consen 1 RKIRIAIDIDGVLAD 15 (191)
T ss_dssp --EEEEEESBTTTB-
T ss_pred CCcEEEEECCCCCcc
Confidence 356 99999999998
No 269
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=57.11 E-value=12 Score=33.26 Aligned_cols=31 Identities=26% Similarity=0.291 Sum_probs=21.1
Q ss_pred cCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhc
Q 015439 115 KKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKY 154 (406)
Q Consensus 115 ~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~ 154 (406)
++.++++||+||||++ +. +...++++++.+.
T Consensus 3 ~~~~~viFD~DGTLiD-----s~----~~~~~a~~~~~~~ 33 (188)
T PRK10725 3 DRYAGLIFDMDGTILD-----TE----PTHRKAWREVLGR 33 (188)
T ss_pred CcceEEEEcCCCcCcc-----CH----HHHHHHHHHHHHH
Confidence 3457899999999998 22 2455566666554
No 270
>TIGR02399 salt_tol_Pase glucosylglycerol 3-phosphatase. Proteins in this family are glucosylglycerol-phosphate phosphatase, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=57.06 E-value=17 Score=36.42 Aligned_cols=49 Identities=27% Similarity=0.398 Sum_probs=41.8
Q ss_pred hccCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcCCEEEEcCC
Q 015439 113 AKKKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYFPTAIITGR 163 (406)
Q Consensus 113 ~~~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~~v~I~SGR 163 (406)
.++++.||+=|+||.=++-++||-...|.+.-..|.+.|.. .|++.|--
T Consensus 4 ~~~~nlLiVQDLDGVCmpLVkDPltR~ld~~Yv~A~~~l~~--~F~VLTnG 52 (389)
T TIGR02399 4 INTENLLIVQDLDGVCIPLVKDPLTRKLDSKYVFAVKNLEK--EFYVLTNG 52 (389)
T ss_pred cCCCCeEEEecCCccchhhccCcccccCCHHHHHHHHHhcC--cEEEEeCC
Confidence 46789999999999999999999988999999999988875 56666643
No 271
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=56.84 E-value=16 Score=32.57 Aligned_cols=44 Identities=30% Similarity=0.301 Sum_probs=34.0
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCc-CCHHHHHHHHhCCCc-eEEEecC
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDR-TDEDAFKVLRKGNRG-YGILVSS 350 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~-NDedMf~~~~~~~~G-~gVaVgn 350 (406)
-+...+..+++.+|++++ .+++|||+. +|+.+=+.+ | .+|.|..
T Consensus 92 P~p~~~~~~l~~~~~~~~---~~l~IGDs~~~Di~aA~~a-----Gi~~i~v~~ 137 (170)
T TIGR01668 92 PPGCAFRRAHPEMGLTSE---QVAVVGDRLFTDVMGGNRN-----GSYTILVEP 137 (170)
T ss_pred CChHHHHHHHHHcCCCHH---HEEEECCcchHHHHHHHHc-----CCeEEEEcc
Confidence 457789999999999875 799999997 798776664 4 3566643
No 272
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=55.48 E-value=13 Score=39.37 Aligned_cols=41 Identities=27% Similarity=0.321 Sum_probs=30.5
Q ss_pred CCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecC
Q 015439 298 WNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSS 350 (406)
Q Consensus 298 vsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgn 350 (406)
-.|-.+++ +.+|.+.. -++.||+.+|.+||+.+ +.+++|..
T Consensus 175 e~Kv~rl~---~~~g~~~~----~~aYgDS~sD~plL~~a-----~e~y~V~~ 215 (497)
T PLN02177 175 DHKRDAVL---KEFGDALP----DLGLGDRETDHDFMSIC-----KEGYMVPR 215 (497)
T ss_pred HHHHHHHH---HHhCCCCc----eEEEECCccHHHHHHhC-----CccEEeCC
Confidence 34666665 55664432 38999999999999997 67888876
No 273
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=54.85 E-value=23 Score=32.16 Aligned_cols=13 Identities=38% Similarity=0.708 Sum_probs=11.8
Q ss_pred EEEEEecCCccCC
Q 015439 118 IAIFSDYDGTLSP 130 (406)
Q Consensus 118 ~lI~lD~DGTL~~ 130 (406)
+.|+||+||||++
T Consensus 3 k~viFDldGtL~d 15 (211)
T TIGR02247 3 KAVIFDFGGVLLP 15 (211)
T ss_pred eEEEEecCCceec
Confidence 4789999999998
No 274
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=54.09 E-value=22 Score=35.05 Aligned_cols=36 Identities=17% Similarity=0.338 Sum_probs=32.2
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~ 337 (406)
.|...+..+++.+|+..+ .+++|||+..|..+-+..
T Consensus 87 pk~~~i~~~~~~l~i~~~---~~vfidD~~~d~~~~~~~ 122 (320)
T TIGR01686 87 PKSESLRKIAKKLNLGTD---SFLFIDDNPAERANVKIT 122 (320)
T ss_pred chHHHHHHHHHHhCCCcC---cEEEECCCHHHHHHHHHH
Confidence 799999999999999875 799999999998887774
No 275
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=53.91 E-value=5.8 Score=45.90 Aligned_cols=60 Identities=17% Similarity=0.135 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCce-EEEecCCCC-----CccceEEeCCHHHH
Q 015439 300 KGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGY-GILVSSVPK-----ETKAFYSLRDPSEV 367 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~-gVaVgna~~-----~t~A~y~l~~~~eV 367 (406)
+......+++++|++++ .+++|||+.+|+.+=+.+ |+ .|.|..... ...|.+++++..++
T Consensus 220 ~Pe~~~~a~~~lgv~p~---e~v~IgDs~~Di~AA~~a-----Gm~~I~v~~~~~~~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 220 APDIFLAAAKILGVPTS---ECVVIEDALAGVQAARAA-----GMRCIAVTTTLSEEILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred CHHHHHHHHHHcCcCcc---cEEEEcCCHHHHHHHHHc-----CCEEEEECCCCCHHHHhhCCCCEEECChHHC
Confidence 46788899999999876 799999999987776665 43 556654321 23678889998885
No 276
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=53.51 E-value=12 Score=32.94 Aligned_cols=27 Identities=30% Similarity=0.443 Sum_probs=18.1
Q ss_pred EEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhc
Q 015439 119 AIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKY 154 (406)
Q Consensus 119 lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~ 154 (406)
+|+||+||||++. . +...++++.+.+.
T Consensus 1 ~viFD~DGTL~D~-----~----~~~~~~~~~~~~~ 27 (175)
T TIGR01493 1 AMVFDVYGTLVDV-----H----GGVRACLAAIAPE 27 (175)
T ss_pred CeEEecCCcCccc-----H----HHHHHHHHHhhhh
Confidence 3789999999982 1 2455566665543
No 277
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=52.69 E-value=15 Score=33.21 Aligned_cols=13 Identities=38% Similarity=0.171 Sum_probs=11.6
Q ss_pred EEEEEecCCccCC
Q 015439 118 IAIFSDYDGTLSP 130 (406)
Q Consensus 118 ~lI~lD~DGTL~~ 130 (406)
++|+||+||||++
T Consensus 1 k~viFDlDGTL~d 13 (203)
T TIGR02252 1 KLITFDAVGTLLA 13 (203)
T ss_pred CeEEEecCCceee
Confidence 3689999999998
No 278
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=51.87 E-value=18 Score=32.20 Aligned_cols=37 Identities=14% Similarity=0.115 Sum_probs=23.3
Q ss_pred HHHHHHHHHcCCCCCCCccEEEEeCCc-------CCHHHHHHHHh
Q 015439 302 KAVEFLLESLGLSDSDDVLPIYIGDDR-------TDEDAFKVLRK 339 (406)
Q Consensus 302 ~Al~~Ll~~lg~~~~~~~~viaiGD~~-------NDedMf~~~~~ 339 (406)
..+..+++.+|+... ++.+++..|.. -|-++|+.+-+
T Consensus 109 ~~~~~~l~~~gl~~~-fd~i~~~~~~~~~~~~~KP~p~~~~~~~~ 152 (184)
T TIGR01993 109 AHARRALNRLGIEDC-FDGIFCFDTANPDYLLPKPSPQAYEKALR 152 (184)
T ss_pred HHHHHHHHHcCcHhh-hCeEEEeecccCccCCCCCCHHHHHHHHH
Confidence 356788888998642 33566655532 37788887643
No 279
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=50.03 E-value=54 Score=26.84 Aligned_cols=36 Identities=22% Similarity=0.378 Sum_probs=30.0
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeC-CcCCHHHHHHHHh
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGD-DRTDEDAFKVLRK 339 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD-~~NDedMf~~~~~ 339 (406)
.|-..|++|++.++-. ..|.||| ++-|.+....+-.
T Consensus 50 ~K~~~i~~i~~~fP~~-----kfiLIGDsgq~DpeiY~~ia~ 86 (100)
T PF09949_consen 50 HKRDNIERILRDFPER-----KFILIGDSGQHDPEIYAEIAR 86 (100)
T ss_pred HHHHHHHHHHHHCCCC-----cEEEEeeCCCcCHHHHHHHHH
Confidence 7999999999998643 5899999 5789999887643
No 280
>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43).
Probab=49.79 E-value=31 Score=32.49 Aligned_cols=45 Identities=24% Similarity=0.376 Sum_probs=30.9
Q ss_pred EEcCCCC-CHHHHHHHHHHHcCCCCCCCccEEEEeCCcC--CHHHHHHHHhC
Q 015439 292 IRPVIDW-NKGKAVEFLLESLGLSDSDDVLPIYIGDDRT--DEDAFKVLRKG 340 (406)
Q Consensus 292 I~P~~gv-sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~N--DedMf~~~~~~ 340 (406)
..|. |+ ..-.||++|-+.+.-.. +-|+||+|+.| |.+.|+.++.-
T Consensus 72 ~~~r-g~~qRn~AL~~ir~~~~~~~---~GVVyFADDdN~Ysl~lF~emR~i 119 (223)
T cd00218 72 LKPR-GVEQRNLALRWIREHLSAKL---DGVVYFADDDNTYDLELFEEMRKI 119 (223)
T ss_pred CCcc-cHHHHHHHHHHHHhccccCc---ceEEEEccCCCcccHHHHHHHhcc
Confidence 3444 33 33467888877764222 36999999887 88899999863
No 281
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=49.44 E-value=13 Score=37.73 Aligned_cols=49 Identities=22% Similarity=0.170 Sum_probs=34.1
Q ss_pred hccCCEEEEEecCCccCCCCC------CCCcc-CCChhHHHHHHHHHhcC-CEEEEc
Q 015439 113 AKKKKIAIFSDYDGTLSPIVD------DPDRA-IMSDGMRSAVRNVAKYF-PTAIIT 161 (406)
Q Consensus 113 ~~~k~~lI~lD~DGTL~~~~~------~p~~~-~~s~~~~~aL~~L~~~~-~v~I~S 161 (406)
.++..+++.|||||||..... +|.+- .+.++.-.-|+.|.+++ .++|.|
T Consensus 71 v~~~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~ift 127 (422)
T KOG2134|consen 71 VNGGSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFT 127 (422)
T ss_pred cCCCcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhhccCCeEEEEEe
Confidence 466778899999999997432 23333 35577778888888875 566655
No 282
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=48.93 E-value=27 Score=37.49 Aligned_cols=57 Identities=9% Similarity=0.191 Sum_probs=44.7
Q ss_pred CCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhCC
Q 015439 116 KKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVGL 174 (406)
Q Consensus 116 k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~l 174 (406)
..+.++++.||+++.... -...+-++..++|++|.+.+ .++++||.....+..+.+.
T Consensus 384 g~~~~~~~~~~~~~g~~~--~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~ 441 (562)
T TIGR01511 384 GSTSVLVAVNGELAGVFA--LEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKE 441 (562)
T ss_pred CCEEEEEEECCEEEEEEE--ecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH
Confidence 357788899999876321 12346789999999999885 8999999999988887754
No 283
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=46.87 E-value=20 Score=31.18 Aligned_cols=62 Identities=21% Similarity=0.268 Sum_probs=39.6
Q ss_pred EEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCCh--hhHHHHhCCcCceEEccCCceEeCCCCC
Q 015439 119 AIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSR--DKVYELVGLTELYYAGSHGMDIMGPVDH 193 (406)
Q Consensus 119 lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~--~~l~~~~~l~~~~li~~nGa~I~~~~~~ 193 (406)
+-++|+||.|+.-.+ ...++ .-+.++.+.+.+ +++|+|--.. +.+.++- ..-|+.++.|...
T Consensus 45 iAildL~G~~l~l~S---~R~~~--~~evi~~I~~~G~PviVAtDV~p~P~~V~Kia--------~~f~A~ly~P~~d 109 (138)
T PF04312_consen 45 IAILDLDGELLDLKS---SRNMS--RSEVIEWISEYGKPVIVATDVSPPPETVKKIA--------RSFNAVLYTPERD 109 (138)
T ss_pred EEEEecCCcEEEEEe---ecCCC--HHHHHHHHHHcCCEEEEEecCCCCcHHHHHHH--------HHhCCcccCCCCc
Confidence 346899999997322 22333 567888888887 8999986443 4555533 3346666777643
No 284
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=46.65 E-value=19 Score=33.69 Aligned_cols=36 Identities=14% Similarity=0.157 Sum_probs=29.8
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~ 337 (406)
.+......+++++|++++ .+++|||+..|+++=+.+
T Consensus 153 P~p~~y~~i~~~lgv~p~---e~lfVgDs~~Di~AA~~A 188 (220)
T TIGR01691 153 TEAQSYVKIAGQLGSPPR---EILFLSDIINELDAARKA 188 (220)
T ss_pred CCHHHHHHHHHHhCcChh---HEEEEeCCHHHHHHHHHc
Confidence 456788999999999876 799999999888776554
No 285
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=46.56 E-value=12 Score=34.20 Aligned_cols=15 Identities=60% Similarity=0.948 Sum_probs=12.9
Q ss_pred CCEEEEEecCCccCC
Q 015439 116 KKIAIFSDYDGTLSP 130 (406)
Q Consensus 116 k~~lI~lD~DGTL~~ 130 (406)
++.+||+|+|||++-
T Consensus 2 kk~vi~sDFDGTITl 16 (220)
T COG4359 2 KKPVIFSDFDGTITL 16 (220)
T ss_pred CceEEEecCCCceEe
Confidence 567899999999986
No 286
>PF09506 Salt_tol_Pase: Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase); InterPro: IPR012765 Proteins in this family are glucosylglycerol-phosphate phosphatases, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=45.95 E-value=31 Score=34.43 Aligned_cols=46 Identities=24% Similarity=0.375 Sum_probs=38.7
Q ss_pred CCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcCCEEEEcCC
Q 015439 116 KKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYFPTAIITGR 163 (406)
Q Consensus 116 k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~~v~I~SGR 163 (406)
++.||+=|+||.=++-++||-...|.+.-..|.++|.. .|++.|--
T Consensus 1 enlLivQDLDGVCm~LVkDPltR~ld~~Yv~A~~~l~~--~F~VLTnG 46 (381)
T PF09506_consen 1 ENLLIVQDLDGVCMPLVKDPLTRRLDPDYVRAARQLEG--HFYVLTNG 46 (381)
T ss_pred CCeeEEecCCccchhhccCccccccCHHHHHHHHHhcC--cEEEEeCC
Confidence 46789999999999999999888999999999888875 56666643
No 287
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=45.15 E-value=14 Score=39.05 Aligned_cols=15 Identities=33% Similarity=0.388 Sum_probs=12.6
Q ss_pred CEEEEEecCCccCCC
Q 015439 117 KIAIFSDYDGTLSPI 131 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~ 131 (406)
+..++||+||||+..
T Consensus 22 ~~~~~FDfDGTLt~~ 36 (497)
T PLN02177 22 NQTVAADLDGTLLIS 36 (497)
T ss_pred ccEEEEecCCcccCC
Confidence 456899999999983
No 288
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=45.09 E-value=59 Score=33.11 Aligned_cols=87 Identities=22% Similarity=0.256 Sum_probs=57.3
Q ss_pred CeEEEecC-----eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCCC
Q 015439 280 RLRLTHGR-----KVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPKE 354 (406)
Q Consensus 280 ~l~v~~g~-----~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~~ 354 (406)
++.+.+|. -.+|++|+ |++ |..+|++|+..++... .--++||.- ++. .=||-+|.. .-
T Consensus 341 Gy~lvtgGTDnHlvLvDLr~~-G~d-GarvE~vle~~~I~~N---KNtvpGD~S-------al~----PgGiRiGtP-Am 403 (477)
T KOG2467|consen 341 GYKLVTGGTDNHLVLVDLRPK-GVD-GARVEKVLELCHIALN---KNTVPGDKS-------ALS----PGGIRIGTP-AM 403 (477)
T ss_pred CceEecCCccceEEEEecccc-CCc-hHHHHHHHHHhhhhhc---CCcCCCCcc-------ccC----CCceeccch-hh
Confidence 47776553 26799999 977 7778999999999865 456789853 121 236777741 11
Q ss_pred ccceEEeCCHHHHHHHHHHHHHhhhhhHh
Q 015439 355 TKAFYSLRDPSEVQEFLLSLVRWKKLEKE 383 (406)
Q Consensus 355 t~A~y~l~~~~eV~~fL~~L~~~~~~~~~ 383 (406)
|.--+.=.|-+.|.+||.+-+....+-++
T Consensus 404 TsRG~~e~df~~v~~fi~~av~i~~~~~~ 432 (477)
T KOG2467|consen 404 TSRGFGEEDFEKVADFIDRAVKIALEIQK 432 (477)
T ss_pred cccCccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22222224567899999998877766553
No 289
>PF03360 Glyco_transf_43: Glycosyltransferase family 43; InterPro: IPR005027 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 43 GT43 from CAZY comprises enzymes with only one known activities; beta-glucuronyltransferase(2.4.1 from EC);.; GO: 0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity, 0016020 membrane; PDB: 2D0J_B 3CU0_A 1FGG_B 1KWS_B 1V84_B 1V83_B 1V82_A.
Probab=44.88 E-value=30 Score=32.23 Aligned_cols=43 Identities=21% Similarity=0.305 Sum_probs=23.7
Q ss_pred cCCCCC-HHHHHHHHHHHcCCCCCCCccEEEEeCCcC--CHHHHHHHHhC
Q 015439 294 PVIDWN-KGKAVEFLLESLGLSDSDDVLPIYIGDDRT--DEDAFKVLRKG 340 (406)
Q Consensus 294 P~~gvs-KG~Al~~Ll~~lg~~~~~~~~viaiGD~~N--DedMf~~~~~~ 340 (406)
|. |+. .-.||++|-...... ..-|+||+|+.| |++.|+.++.-
T Consensus 56 ~r-g~~qRn~AL~~ir~~~~~~---~~GVVyFaDDdNtYdl~LF~emR~~ 101 (207)
T PF03360_consen 56 PR-GVHQRNAALRWIRNNANHR---LDGVVYFADDDNTYDLRLFDEMRKT 101 (207)
T ss_dssp -T-SHHHHHHHHHHHHSTTTSS---S-EEEEE--TTSEE-HHHHHHHCT-
T ss_pred cc-cHHHHHHHHHHHHhcccCC---CCcEEEECCCCCeeeHHHHHHHHhh
Confidence 44 443 334666665222222 237999999988 99999998763
No 290
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=44.65 E-value=65 Score=31.82 Aligned_cols=46 Identities=26% Similarity=0.262 Sum_probs=34.2
Q ss_pred EEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhc----C-CEEEEc---CCChhhHHH
Q 015439 119 AIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKY----F-PTAIIT---GRSRDKVYE 170 (406)
Q Consensus 119 lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~----~-~v~I~S---GR~~~~l~~ 170 (406)
.++||+||||.. . ..+-+...++|+.|.+. + ++.++| |++...+.+
T Consensus 2 ~~ifD~DGvL~~-----g-~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~ 55 (321)
T TIGR01456 2 GFAFDIDGVLFR-----G-KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAE 55 (321)
T ss_pred EEEEeCcCceEC-----C-ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHH
Confidence 578999999997 2 34478899999999985 4 676665 666665444
No 291
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=44.19 E-value=12 Score=32.59 Aligned_cols=30 Identities=23% Similarity=-0.037 Sum_probs=24.1
Q ss_pred HHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHH
Q 015439 304 VEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKV 336 (406)
Q Consensus 304 l~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~ 336 (406)
..+.++.+|.+++ .+++|||+.+|..+...
T Consensus 104 ~~k~l~~l~~~p~---~~i~i~Ds~~~~~aa~~ 133 (148)
T smart00577 104 YVKDLSLLGRDLS---NVIIIDDSPDSWPFHPE 133 (148)
T ss_pred EeecHHHcCCChh---cEEEEECCHHHhhcCcc
Confidence 5666788898876 79999999999887544
No 292
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=43.24 E-value=8.6 Score=28.72 Aligned_cols=27 Identities=33% Similarity=0.617 Sum_probs=17.6
Q ss_pred HHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHH
Q 015439 303 AVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKV 336 (406)
Q Consensus 303 Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~ 336 (406)
=|+.|++++|+ ++|+||-.-|++|++.
T Consensus 6 DVqQLLK~fG~-------~IY~gdr~~DielM~~ 32 (62)
T PF06014_consen 6 DVQQLLKKFGI-------IIYVGDRLWDIELMEI 32 (62)
T ss_dssp HHHHHHHTTS------------S-HHHHHHHHHH
T ss_pred HHHHHHHHCCE-------EEEeCChHHHHHHHHH
Confidence 36789999984 8999999999999765
No 293
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=42.72 E-value=41 Score=30.36 Aligned_cols=23 Identities=9% Similarity=0.053 Sum_probs=18.3
Q ss_pred CCCCCCCccEEEEeCCcCCHHHHHHH
Q 015439 312 GLSDSDDVLPIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 312 g~~~~~~~~viaiGD~~NDedMf~~~ 337 (406)
|++++ .+++|||+..|+.+-+.+
T Consensus 127 gl~p~---e~l~VgDs~~di~aA~~a 149 (174)
T TIGR01685 127 VLKPA---QILFFDDRTDNVREVWGY 149 (174)
T ss_pred CCCHH---HeEEEcChhHhHHHHHHh
Confidence 57765 899999999998775554
No 294
>COG4996 Predicted phosphatase [General function prediction only]
Probab=42.08 E-value=30 Score=30.08 Aligned_cols=15 Identities=40% Similarity=0.129 Sum_probs=12.5
Q ss_pred EEEEEecCCccCCCC
Q 015439 118 IAIFSDYDGTLSPIV 132 (406)
Q Consensus 118 ~lI~lD~DGTL~~~~ 132 (406)
++|+||.||||-++.
T Consensus 1 ~~i~~d~d~t~wdhh 15 (164)
T COG4996 1 RAIVFDADKTLWDHH 15 (164)
T ss_pred CcEEEeCCCcccccc
Confidence 368999999999853
No 295
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=41.86 E-value=27 Score=33.75 Aligned_cols=36 Identities=8% Similarity=0.010 Sum_probs=27.7
Q ss_pred CHHHHHHHHHHHcCCC-CCCCccEEEEeCCcCCHHHHHHH
Q 015439 299 NKGKAVEFLLESLGLS-DSDDVLPIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~-~~~~~~viaiGD~~NDedMf~~~ 337 (406)
.+...++..++.++.+ .+ .+++|||+.+|..+-+.+
T Consensus 252 p~p~~~~~~l~~~~~~~~~---~~~~vgD~~~d~~~a~~~ 288 (300)
T PHA02530 252 PDDVVKEEIFWEKIAPKYD---VLLAVDDRDQVVDMWRRI 288 (300)
T ss_pred CcHHHHHHHHHHHhccCce---EEEEEcCcHHHHHHHHHh
Confidence 3445677777777763 33 799999999999998886
No 296
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=38.28 E-value=32 Score=34.74 Aligned_cols=36 Identities=25% Similarity=0.170 Sum_probs=29.5
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~ 337 (406)
-|-..+..+++.++++++ .+++|||+.+|+.+=+.+
T Consensus 105 P~p~~l~~a~~~l~v~~~---~svmIGDs~sDi~aAk~a 140 (354)
T PRK05446 105 PKTGLVEEYLAEGAIDLA---NSYVIGDRETDVQLAENM 140 (354)
T ss_pred CCHHHHHHHHHHcCCCcc---cEEEEcCCHHHHHHHHHC
Confidence 456688888999998876 799999999998776664
No 297
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=38.27 E-value=50 Score=35.90 Aligned_cols=79 Identities=14% Similarity=0.099 Sum_probs=46.8
Q ss_pred cCCEEEEEecCCccCCCCC----CCCcc--CCChhHHHHHHHHHhcC-CEEEEcCCChhhH---HHHhC-CcCceEEccC
Q 015439 115 KKKIAIFSDYDGTLSPIVD----DPDRA--IMSDGMRSAVRNVAKYF-PTAIITGRSRDKV---YELVG-LTELYYAGSH 183 (406)
Q Consensus 115 ~k~~lI~lD~DGTL~~~~~----~p~~~--~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l---~~~~~-l~~~~li~~n 183 (406)
-..++|+.|+|||++.-+- -|.-+ --...+.+...++.+++ .++.+|.|..... +.++. +...+.+--.
T Consensus 528 Wn~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPd 607 (738)
T KOG2116|consen 528 WNDKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPD 607 (738)
T ss_pred cCCcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCC
Confidence 3456899999999996210 00000 00123444555556665 7999999998654 33443 3344566667
Q ss_pred CceEeCCCCC
Q 015439 184 GMDIMGPVDH 193 (406)
Q Consensus 184 Ga~I~~~~~~ 193 (406)
|=.|..|++.
T Consensus 608 GPViLSPd~l 617 (738)
T KOG2116|consen 608 GPVILSPDSL 617 (738)
T ss_pred CCEEeCCCcc
Confidence 7777777654
No 298
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=36.22 E-value=44 Score=31.98 Aligned_cols=28 Identities=18% Similarity=0.199 Sum_probs=21.0
Q ss_pred hhHHHHHHHhc--cCCEEEEEecCCccCCC
Q 015439 104 KYFEKIMSEAK--KKKIAIFSDYDGTLSPI 131 (406)
Q Consensus 104 ~~f~~i~~~~~--~k~~lI~lD~DGTL~~~ 131 (406)
.+|..|..+.. .+..||+||+|.||+..
T Consensus 5 ~s~~eV~~~~~~~~~~tLvvfDiDdTLi~~ 34 (252)
T PF11019_consen 5 YSFHEVQDYLENADQDTLVVFDIDDTLITP 34 (252)
T ss_pred cCHHHHHHHHHcCCCCeEEEEEcchhhhcC
Confidence 45777765443 26889999999999974
No 299
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=36.15 E-value=1.1e+02 Score=29.85 Aligned_cols=24 Identities=25% Similarity=0.288 Sum_probs=17.2
Q ss_pred HhccCCEEEEEecCCccCCCCCCC
Q 015439 112 EAKKKKIAIFSDYDGTLSPIVDDP 135 (406)
Q Consensus 112 ~~~~k~~lI~lD~DGTL~~~~~~p 135 (406)
.......++++|.||-+.....+|
T Consensus 190 ~l~Ad~Li~lTDVdGVy~~dP~~~ 213 (284)
T cd04256 190 ELKADLLILLSDVDGLYDGPPGSD 213 (284)
T ss_pred HcCCCEEEEEeCCCeeecCCCCCC
Confidence 556667788899999998643333
No 300
>PF13382 Adenine_deam_C: Adenine deaminase C-terminal domain; PDB: 3T8L_B 3T81_A 3NQB_A.
Probab=35.05 E-value=1.7e+02 Score=26.35 Aligned_cols=56 Identities=25% Similarity=0.138 Sum_probs=35.3
Q ss_pred cEEEEeCCcCCHHHHHHHHh---CCCceEEEecCCCCCccceEEe--------CCHHHHHHHHHHHHHhhhh
Q 015439 320 LPIYIGDDRTDEDAFKVLRK---GNRGYGILVSSVPKETKAFYSL--------RDPSEVQEFLLSLVRWKKL 380 (406)
Q Consensus 320 ~viaiGD~~NDedMf~~~~~---~~~G~gVaVgna~~~t~A~y~l--------~~~~eV~~fL~~L~~~~~~ 380 (406)
.++++|+ ||++|..++++ .+.|+.++-. .+..|..-| .+.++|++.++.|.+..++
T Consensus 67 niiviG~--~~~dm~~A~n~l~~~gGG~vvv~~---g~v~a~lpLpi~GlmS~~~~eev~~~~~~l~~~~~~ 133 (171)
T PF13382_consen 67 NIIVIGT--NDEDMALAANRLIEMGGGIVVVDD---GEVLAELPLPIAGLMSDLPAEEVARQLEELEEALRE 133 (171)
T ss_dssp -EEEEES--SHHHHHHHHHHHHHTTSEEEEEET---TEEEEEEE-TBTTTBBSS-HHHHHHHHHHHHHHHHT
T ss_pred CEEEEEC--CHHHHHHHHHHHHHhCCCEEEEEC---CEEEEEEeccccceecCCCHHHHHHHHHHHHHHHHH
Confidence 7999998 68888877755 4455554432 123444443 2568899998888765554
No 301
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=34.31 E-value=68 Score=31.51 Aligned_cols=68 Identities=24% Similarity=0.411 Sum_probs=52.7
Q ss_pred hCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCC
Q 015439 277 DYPRLRLTHGRKVLEIRPVIDWNKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVP 352 (406)
Q Consensus 277 ~~p~l~v~~g~~~lEI~P~~gvsKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~ 352 (406)
+||++..+.+ .-+.... +..+..=+..|++.+++.. .++++|-|+-=|-+++.+-.+ ...|++|-|.+
T Consensus 69 N~PGf~~t~~--~~~~~~~-n~er~~~~~~ll~~l~i~~----~~i~~gHSrGcenal~la~~~-~~~g~~lin~~ 136 (297)
T PF06342_consen 69 NYPGFGFTPG--YPDQQYT-NEERQNFVNALLDELGIKG----KLIFLGHSRGCENALQLAVTH-PLHGLVLINPP 136 (297)
T ss_pred CCCCCCCCCC--CcccccC-hHHHHHHHHHHHHHcCCCC----ceEEEEeccchHHHHHHHhcC-ccceEEEecCC
Confidence 4565555544 4455566 7799999999999999985 599999999999999998655 35788887754
No 302
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=34.17 E-value=70 Score=35.62 Aligned_cols=64 Identities=11% Similarity=0.140 Sum_probs=47.3
Q ss_pred HHHHhccCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhCC
Q 015439 109 IMSEAKKKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVGL 174 (406)
Q Consensus 109 i~~~~~~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~l 174 (406)
+..+.....+++++=+||+++-... -...+-++.+++|++|++.+ .++++||.....+..+.+.
T Consensus 540 ~~~~~~~g~~~v~va~~~~~~g~i~--l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~ 604 (741)
T PRK11033 540 INELESAGKTVVLVLRNDDVLGLIA--LQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGE 604 (741)
T ss_pred HHHHHhCCCEEEEEEECCEEEEEEE--EecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 3345555567777888998875321 12246689999999999885 8999999999998888653
No 303
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=33.65 E-value=36 Score=35.95 Aligned_cols=24 Identities=29% Similarity=0.290 Sum_probs=16.8
Q ss_pred CEEEEEecCCccCCCCCCCCccCCChhHH
Q 015439 117 KIAIFSDYDGTLSPIVDDPDRAIMSDGMR 145 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~~~~p~~~~~s~~~~ 145 (406)
+.-+++|+||||+. +....+.-|+
T Consensus 8 ~~~~~fD~DGTLlr-----s~ssFpyFml 31 (498)
T PLN02499 8 SYSVVSELEGTLLK-----DADPFSYFML 31 (498)
T ss_pred cceEEEecccceec-----CCCccHHHHH
Confidence 34588999999998 3344555555
No 304
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=33.17 E-value=69 Score=37.28 Aligned_cols=29 Identities=28% Similarity=0.300 Sum_probs=19.8
Q ss_pred CEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhc
Q 015439 117 KIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKY 154 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~ 154 (406)
.+.++||+||||++ +. +...++++++.+.
T Consensus 75 ikaVIFDlDGTLiD-----S~----~~~~~a~~~~~~~ 103 (1057)
T PLN02919 75 VSAVLFDMDGVLCN-----SE----EPSRRAAVDVFAE 103 (1057)
T ss_pred CCEEEECCCCCeEe-----Ch----HHHHHHHHHHHHH
Confidence 56789999999998 22 3445566655554
No 305
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=32.59 E-value=44 Score=29.66 Aligned_cols=33 Identities=21% Similarity=0.282 Sum_probs=25.5
Q ss_pred HHHHHHHHHHcC--CCCCCCccEEEEeCCc--------CCHHHHHH
Q 015439 301 GKAVEFLLESLG--LSDSDDVLPIYIGDDR--------TDEDAFKV 336 (406)
Q Consensus 301 G~Al~~Ll~~lg--~~~~~~~~viaiGD~~--------NDedMf~~ 336 (406)
...++.+++.+| ++++ ++++|||+. +|+.+=+.
T Consensus 111 p~~~~~~~~~~~~~~~~~---~~v~VGD~~~~~~~~~~~Di~aA~~ 153 (166)
T TIGR01664 111 TGMWEYLQSQYNSPIKMT---RSFYVGDAAGRKLDFSDADIKFAKN 153 (166)
T ss_pred cHHHHHHHHHcCCCCCch---hcEEEECCCCCCCCCchhHHHHHHH
Confidence 568889999998 7765 799999985 47665444
No 306
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=32.34 E-value=1.1e+02 Score=30.37 Aligned_cols=70 Identities=23% Similarity=0.308 Sum_probs=44.9
Q ss_pred HHHHHhccCCEEEEEe----cCCccCCCCCCCCccCCChhHHHHHHHHHhc-CC-----------EEEEcCCChhhHHHH
Q 015439 108 KIMSEAKKKKIAIFSD----YDGTLSPIVDDPDRAIMSDGMRSAVRNVAKY-FP-----------TAIITGRSRDKVYEL 171 (406)
Q Consensus 108 ~i~~~~~~k~~lI~lD----~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~-~~-----------v~I~SGR~~~~l~~~ 171 (406)
+.....+.+.+|+++| |||-+.| .+-|.+|+++ +. |+=-|||..++....
T Consensus 185 ~l~~a~k~r~klv~TDg~FSMDGdiaP--------------l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~v 250 (417)
T KOG1359|consen 185 CLISACKMRLKLVVTDGVFSMDGDIAP--------------LEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGV 250 (417)
T ss_pred HHHHhhhheEEEEEecceeccCCCccc--------------HHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCC
Confidence 5556777888898866 7777766 4456677765 32 233588888777665
Q ss_pred hCCc-------CceEEccCCceEeCCC
Q 015439 172 VGLT-------ELYYAGSHGMDIMGPV 191 (406)
Q Consensus 172 ~~l~-------~~~li~~nGa~I~~~~ 191 (406)
.+.. .-.+.+++|.++..|.
T Consensus 251 m~~vdiinsTLgKAlGga~GGyttgp~ 277 (417)
T KOG1359|consen 251 MGDVDIINSTLGKALGGASGGYTTGPK 277 (417)
T ss_pred CCcceehhhhhhhhhcCCCCCCccCCh
Confidence 5421 1135667888777664
No 307
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=31.95 E-value=87 Score=29.44 Aligned_cols=48 Identities=15% Similarity=0.174 Sum_probs=32.9
Q ss_pred CCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcC--CChhhHHHHhC
Q 015439 116 KKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITG--RSRDKVYELVG 173 (406)
Q Consensus 116 k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SG--R~~~~l~~~~~ 173 (406)
-+.+++.|+|||+... +.+.+.++++++.. .-+.++| |+.+.+.+++.
T Consensus 43 ~~~l~ivDldga~~g~----------~~n~~~i~~i~~~~~~pv~~gGGIrs~edv~~l~~ 93 (228)
T PRK04128 43 VDKIHVVDLDGAFEGK----------PKNLDVVKNIIRETGLKVQVGGGLRTYESIKDAYE 93 (228)
T ss_pred CCEEEEEECcchhcCC----------cchHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHH
Confidence 4668889999999762 23577888888764 3355555 56677777664
No 308
>TIGR00071 hisT_truA pseudouridylate synthase I. universal so far, single copy in all prokaryotes, 3 in yeast. Trusted cutoff for orthology is about 100 based on 1 match only in complete prokaryote with length 200.
Probab=31.70 E-value=55 Score=30.81 Aligned_cols=55 Identities=24% Similarity=0.344 Sum_probs=39.6
Q ss_pred CEEEEEecCCccCC-CCCCCCccCCChhHHHHHHHHHhcCCEEEEcCCChhhHHHH
Q 015439 117 KIAIFSDYDGTLSP-IVDDPDRAIMSDGMRSAVRNVAKYFPTAIITGRSRDKVYEL 171 (406)
Q Consensus 117 ~~lI~lD~DGTL~~-~~~~p~~~~~s~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~ 171 (406)
+.++.+-||||=.. ....|+...+..++.++|.++.....-++.+||.-..|-..
T Consensus 2 ~~~l~i~YdGt~f~G~Q~Q~~~~TVq~~le~aL~~~~~~~i~~~~agRTD~GVHA~ 57 (227)
T TIGR00071 2 KIALKIAYDGSNYHGWQRQPNKRTVQGELEKALEAIGKKKITIMSAGRTDKGVHAM 57 (227)
T ss_pred eEEEEEEEcCCCeeEEeECcCCCCHHHHHHHHHHHHhCCCeeEEeeccCcCCcccc
Confidence 45678899999664 44455556777888889888875444578899987776553
No 309
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=31.10 E-value=46 Score=37.90 Aligned_cols=62 Identities=26% Similarity=0.327 Sum_probs=43.5
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCCCccceEEeC--CHHHHHHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPKETKAFYSLR--DPSEVQEFLL 372 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~~t~A~y~l~--~~~eV~~fL~ 372 (406)
.|..-++. ++.+|. .+-+.||+-||--+++++ ..||..+.+.....|.|.-. +-..|...|+
T Consensus 840 qK~~Lie~-lQkl~y------~VgfCGDGANDCgALKaA-----dvGISLSeaEASvAApFTSk~~~I~cVp~vIr 903 (1140)
T KOG0208|consen 840 QKAELIEA-LQKLGY------KVGFCGDGANDCGALKAA-----DVGISLSEAEASVAAPFTSKTPSISCVPDVIR 903 (1140)
T ss_pred hHHHHHHH-HHhcCc------EEEecCCCcchhhhhhhc-----ccCcchhhhhHhhcCccccCCCchhhHhHHHh
Confidence 67665554 455665 588999999999999997 57888887543345666433 5566666665
No 310
>PLN02458 transferase, transferring glycosyl groups
Probab=30.95 E-value=77 Score=31.68 Aligned_cols=35 Identities=20% Similarity=0.145 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeCCcC--CHHHHHHHHhC
Q 015439 300 KGKAVEFLLESLGLSDSDDVLPIYIGDDRT--DEDAFKVLRKG 340 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~~~~~~~viaiGD~~N--DedMf~~~~~~ 340 (406)
.-.||++|-+.. ++ -|+||+|+.| |++.|+.++.-
T Consensus 190 RN~AL~~IR~h~-l~-----GVVyFADDdNtYsl~LFeEmR~i 226 (346)
T PLN02458 190 RNLALRHIEHHK-LS-----GIVHFAGLSNVYDLDFFDEIRDI 226 (346)
T ss_pred HHHHHHHHHhcC-cC-----ceEEEccCCCcccHHHHHHHhcC
Confidence 446777776542 22 5999999887 88999998763
No 311
>TIGR00735 hisF imidazoleglycerol phosphate synthase, cyclase subunit.
Probab=30.49 E-value=1.8e+02 Score=27.56 Aligned_cols=82 Identities=12% Similarity=0.038 Sum_probs=46.1
Q ss_pred hhHHHHHHHhccCCEEEEEec-CCccCCC----CC-CCCccCCChhHHHHHHHHHhcC-CEEEEcCCChh---------h
Q 015439 104 KYFEKIMSEAKKKKIAIFSDY-DGTLSPI----VD-DPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRD---------K 167 (406)
Q Consensus 104 ~~f~~i~~~~~~k~~lI~lD~-DGTL~~~----~~-~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~---------~ 167 (406)
+.++++...-.+++.++.+|+ ||.++.. +. +--...-.....+.++++.+.+ ..+++|++..+ .
T Consensus 111 ~~~~~~~~~~~~~~iv~slD~~~g~~~~~~~~~v~i~gw~~~~~~~~~~~~~~l~~~G~~~iivt~i~~~g~~~g~~~~~ 190 (254)
T TIGR00735 111 ELIYELADRFGSQCIVVAIDAKRVYVNSYCWYEVYIYGGRESTGLDAVEWAKEVEKLGAGEILLTSMDKDGTKSGYDLEL 190 (254)
T ss_pred HHHHHHHHHcCCCCEEEEEEeccCCCCCCccEEEEEeCCcccCCCCHHHHHHHHHHcCCCEEEEeCcCcccCCCCCCHHH
Confidence 345566544444677888995 5654420 00 0001122445677888887775 78888998873 2
Q ss_pred HHHHhCCcCceEEccCCc
Q 015439 168 VYELVGLTELYYAGSHGM 185 (406)
Q Consensus 168 l~~~~~l~~~~li~~nGa 185 (406)
+.++....+++++++.|.
T Consensus 191 ~~~i~~~~~ipvia~GGi 208 (254)
T TIGR00735 191 TKAVSEAVKIPVIASGGA 208 (254)
T ss_pred HHHHHHhCCCCEEEeCCC
Confidence 333333345567766664
No 312
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=30.33 E-value=86 Score=34.61 Aligned_cols=61 Identities=16% Similarity=0.221 Sum_probs=45.4
Q ss_pred HHhccCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC
Q 015439 111 SEAKKKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG 173 (406)
Q Consensus 111 ~~~~~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 173 (406)
.+++...+.+++-+|++++-... -.-.+-++.++++++|++.+ .++++||.....+..+.+
T Consensus 420 ~~a~~G~r~l~va~~~~~lG~i~--l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~ 481 (675)
T TIGR01497 420 QVARQGGTPLVVCEDNRIYGVIY--LKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAA 481 (675)
T ss_pred HHHhCCCeEEEEEECCEEEEEEE--ecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence 45555566677778888876321 11236689999999999985 899999999988887753
No 313
>PTZ00489 glutamate 5-kinase; Provisional
Probab=30.19 E-value=1.9e+02 Score=27.98 Aligned_cols=19 Identities=32% Similarity=0.436 Sum_probs=15.3
Q ss_pred HhccCCEEEEEecCCccCC
Q 015439 112 EAKKKKIAIFSDYDGTLSP 130 (406)
Q Consensus 112 ~~~~k~~lI~lD~DGTL~~ 130 (406)
..+....++++|.||-+..
T Consensus 159 ~l~Ad~LiilTDVdGVy~~ 177 (264)
T PTZ00489 159 HFKADLLVILSDIDGYYTE 177 (264)
T ss_pred HhCCCEEEEeeccCeeEcC
Confidence 5566678889999999975
No 314
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=29.97 E-value=28 Score=36.08 Aligned_cols=17 Identities=35% Similarity=0.618 Sum_probs=13.8
Q ss_pred ccCCEEEEEecCCccCC
Q 015439 114 KKKKIAIFSDYDGTLSP 130 (406)
Q Consensus 114 ~~k~~lI~lD~DGTL~~ 130 (406)
+...++|++|+|||++.
T Consensus 372 r~n~kiVVsDiDGTITk 388 (580)
T COG5083 372 RNNKKIVVSDIDGTITK 388 (580)
T ss_pred eCCCcEEEEecCCcEEe
Confidence 44556788999999998
No 315
>PRK10671 copA copper exporting ATPase; Provisional
Probab=29.61 E-value=1.4e+02 Score=33.68 Aligned_cols=79 Identities=13% Similarity=0.159 Sum_probs=51.4
Q ss_pred hhHHhhCCccchhHHHHH-HHhccCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHH
Q 015439 93 CSWMLKYPSALKYFEKIM-SEAKKKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYE 170 (406)
Q Consensus 93 ~~w~~~~p~~L~~f~~i~-~~~~~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~ 170 (406)
..|+.+++-....++... .+.....+++++-+||+++....- ...+-+...++|++|.+.+ .++++||.....+..
T Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~va~~~~~~g~~~l--~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ 682 (834)
T PRK10671 605 QALLNEQQVDTKALEAEITAQASQGATPVLLAVDGKAAALLAI--RDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANA 682 (834)
T ss_pred HHHHHHcCCChHHHHHHHHHHHhCCCeEEEEEECCEEEEEEEc--cCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHH
Confidence 346655543323333333 344444566777889987742211 2245677899999998885 899999999988877
Q ss_pred HhC
Q 015439 171 LVG 173 (406)
Q Consensus 171 ~~~ 173 (406)
+.+
T Consensus 683 ia~ 685 (834)
T PRK10671 683 IAK 685 (834)
T ss_pred HHH
Confidence 664
No 316
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=28.76 E-value=89 Score=27.48 Aligned_cols=37 Identities=11% Similarity=0.020 Sum_probs=29.0
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHHHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedMf~~~ 337 (406)
-|...++.|++.+.-.. ..++++|||..+|..+++.+
T Consensus 102 ~K~~~l~~i~~~~~~~~--~~f~~~~gn~~~D~~~y~~~ 138 (157)
T smart00775 102 FKIACLRDIKSLFPPQG--NPFYAGFGNRITDVISYSAV 138 (157)
T ss_pred HHHHHHHHHHHhcCCCC--CCEEEEeCCCchhHHHHHHc
Confidence 48889999998775322 23677899999999999996
No 317
>KOG1476 consensus Beta-1,3-glucuronyltransferase B3GAT1/SQV-8 [Posttranslational modification, protein turnover, chaperones]
Probab=28.39 E-value=1.2e+02 Score=30.05 Aligned_cols=47 Identities=19% Similarity=0.331 Sum_probs=30.6
Q ss_pred HHHHHHHHHHc-CCCCCCCccEEEEeCCcC--CHHHHHHHHhCCCceEE-EecC
Q 015439 301 GKAVEFLLESL-GLSDSDDVLPIYIGDDRT--DEDAFKVLRKGNRGYGI-LVSS 350 (406)
Q Consensus 301 G~Al~~Ll~~l-g~~~~~~~~viaiGD~~N--DedMf~~~~~~~~G~gV-aVgn 350 (406)
-.|+++|-.++ +.. ..+-|+||+||.| |++.|+-++.-. .+|+ .||.
T Consensus 165 n~aL~~ir~~~~~~~--~~~GVVyFADDdN~YdleLF~eiR~v~-~~gvWpVg~ 215 (330)
T KOG1476|consen 165 NMALRWIRSRILRHH--KLEGVVYFADDDNTYDLELFEEIRNVK-KFGVWPVGL 215 (330)
T ss_pred HHHHHHHHHhccccc--ccceEEEEccCCcchhHHHHHHHhccc-eeeeEeeee
Confidence 45677776443 221 2347999999988 888899987642 4555 4554
No 318
>COG0101 TruA Pseudouridylate synthase [Translation, ribosomal structure and biogenesis]
Probab=27.57 E-value=87 Score=30.37 Aligned_cols=54 Identities=22% Similarity=0.265 Sum_probs=39.9
Q ss_pred CEEEEEecCCccCC-CCCCCCccCCChhHHHHHHHHHhcCCEEEEcCCChhhHHH
Q 015439 117 KIAIFSDYDGTLSP-IVDDPDRAIMSDGMRSAVRNVAKYFPTAIITGRSRDKVYE 170 (406)
Q Consensus 117 ~~lI~lD~DGTL~~-~~~~p~~~~~s~~~~~aL~~L~~~~~v~I~SGR~~~~l~~ 170 (406)
+..+-+-||||-.. ....|+...+-.+..+||.++.....-++++||.-..|-.
T Consensus 3 ri~l~iaYdGt~f~G~Q~Qp~~~TVQ~~le~aL~~i~~~~~~i~~AGRTD~GVHA 57 (266)
T COG0101 3 RIALKIAYDGTRFHGWQRQPNVRTVQGELEKALSKIGGESVRVIGAGRTDAGVHA 57 (266)
T ss_pred eEEEEEEEcCCceeeeccCCCCCCHHHHHHHHHHHhcCCcceeEEecCCCcCccc
Confidence 66788999999885 3344555667778888888887654468999998776644
No 319
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=26.90 E-value=60 Score=27.57 Aligned_cols=35 Identities=17% Similarity=0.360 Sum_probs=28.8
Q ss_pred CCChhHHHHHHHHHhc-CCEEEEcCCChhhHHHHhC
Q 015439 139 IMSDGMRSAVRNVAKY-FPTAIITGRSRDKVYELVG 173 (406)
Q Consensus 139 ~~s~~~~~aL~~L~~~-~~v~I~SGR~~~~l~~~~~ 173 (406)
.+-+.+.+.|++|++. .+++|+|+.+...+...+.
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~ 112 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLE 112 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHH
T ss_pred chhhhhhhhhhhcccccceeEEeecCCccccccccc
Confidence 4556899999999976 5999999999988777653
No 320
>cd04239 AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-like, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis. Regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinases of E. coli (Ec) and Pyrococcus furiosus (Pf) are known to function as homohexamers, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Als
Probab=26.52 E-value=1.5e+02 Score=27.64 Aligned_cols=63 Identities=16% Similarity=0.269 Sum_probs=38.2
Q ss_pred HHhccCCEEEEEecCCccCCCCC-CCCccC---CC-hhH---------HHHHHHHHhc-CCEEEEcCCChhhHHHHhC
Q 015439 111 SEAKKKKIAIFSDYDGTLSPIVD-DPDRAI---MS-DGM---------RSAVRNVAKY-FPTAIITGRSRDKVYELVG 173 (406)
Q Consensus 111 ~~~~~k~~lI~lD~DGTL~~~~~-~p~~~~---~s-~~~---------~~aL~~L~~~-~~v~I~SGR~~~~l~~~~~ 173 (406)
...+.+..++++|.||-+..... .|+... ++ +++ ..+++.+.+. .+++|+.|+....+.+++.
T Consensus 143 ~~l~a~~li~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~~~~~~a~~~~~~~~i~v~I~~g~~~~~l~~~l~ 220 (229)
T cd04239 143 EEIGADVLLKATNVDGVYDADPKKNPDAKKYDRISYDELLKKGLKVMDATALTLCRRNKIPIIVFNGLKPGNLLRALK 220 (229)
T ss_pred HHcCCCEEEEEECCCcccCCCCCCCCCCeEEeEEcHHHHHHHhcCCccHHHHHHHHHCCCeEEEECCCChhHHHHHHc
Confidence 35667778889999999975211 122111 22 122 1333334444 4899999998888888774
No 321
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=26.33 E-value=95 Score=29.08 Aligned_cols=36 Identities=19% Similarity=0.084 Sum_probs=27.9
Q ss_pred CHHHHHHHHHHHcCCCCCCCccE-EEEeCCc-CCHHHHHHH
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLP-IYIGDDR-TDEDAFKVL 337 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~v-iaiGD~~-NDedMf~~~ 337 (406)
-+-.-.+.++++++++.+ .+ ++|||+. +|+.+=+.+
T Consensus 189 P~~~~~~~~~~~~~~~~~---~~~~~IGD~~~~Di~~A~~~ 226 (236)
T TIGR01460 189 PSPAIYRAALNLLQARPE---RRDVMVGDNLRTDILGAKNA 226 (236)
T ss_pred CCHHHHHHHHHHhCCCCc---cceEEECCCcHHHHHHHHHC
Confidence 356678889999998764 45 9999997 899875554
No 322
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=25.85 E-value=2.5e+02 Score=25.83 Aligned_cols=53 Identities=15% Similarity=0.195 Sum_probs=42.6
Q ss_pred HHHHHhccCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC
Q 015439 108 KIMSEAKKKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG 173 (406)
Q Consensus 108 ~i~~~~~~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 173 (406)
++.+..+....+|++.+.|. ++.+.++++.+.+.+ +++.+||.+...+.++++
T Consensus 102 ql~~~~~~gDvli~iS~SG~-------------s~~v~~a~~~Ak~~G~~vI~IT~~~~s~l~~l~~ 155 (196)
T PRK10886 102 QVRALGHAGDVLLAISTRGN-------------SRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLG 155 (196)
T ss_pred HHHHcCCCCCEEEEEeCCCC-------------CHHHHHHHHHHHHCCCEEEEEeCCCCChhhhccc
Confidence 45567777888888887775 467899999998885 899999999988888764
No 323
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=25.67 E-value=87 Score=29.83 Aligned_cols=44 Identities=27% Similarity=0.312 Sum_probs=33.8
Q ss_pred HHHHHHHHHcCCCCCCCccEEEEeCC-cCCHHHHHHHHhCCCceEEEecCCC
Q 015439 302 KAVEFLLESLGLSDSDDVLPIYIGDD-RTDEDAFKVLRKGNRGYGILVSSVP 352 (406)
Q Consensus 302 ~Al~~Ll~~lg~~~~~~~~viaiGD~-~NDedMf~~~~~~~~G~gVaVgna~ 352 (406)
.--+..|+++|..++ +++.|||+ .||...=+.+ +-.++.|.|..
T Consensus 172 ~If~~al~~l~v~Pe---e~vhIgD~l~nD~~gA~~~----G~~ailv~~~~ 216 (237)
T KOG3085|consen 172 RIFQLALERLGVKPE---ECVHIGDLLENDYEGARNL----GWHAILVDNSI 216 (237)
T ss_pred HHHHHHHHHhCCChH---HeEEecCccccccHhHHHc----CCEEEEEcccc
Confidence 455778889999887 79999995 6998776665 13688888753
No 324
>PRK12314 gamma-glutamyl kinase; Provisional
Probab=25.38 E-value=2.3e+02 Score=27.24 Aligned_cols=20 Identities=30% Similarity=0.380 Sum_probs=16.0
Q ss_pred HHhccCCEEEEEecCCccCC
Q 015439 111 SEAKKKKIAIFSDYDGTLSP 130 (406)
Q Consensus 111 ~~~~~k~~lI~lD~DGTL~~ 130 (406)
...+.+..+|++|.||-+..
T Consensus 165 ~~l~Ad~liilTDVdGVy~~ 184 (266)
T PRK12314 165 KLVKADLLIILSDIDGLYDK 184 (266)
T ss_pred HHhCCCEEEEEeCCCcccCC
Confidence 35567778889999999975
No 325
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=24.98 E-value=52 Score=36.90 Aligned_cols=29 Identities=24% Similarity=0.416 Sum_probs=24.3
Q ss_pred cEEEEeCCcCCHHHHHHHHhCCCceEEEecCCCC
Q 015439 320 LPIYIGDDRTDEDAFKVLRKGNRGYGILVSSVPK 353 (406)
Q Consensus 320 ~viaiGD~~NDedMf~~~~~~~~G~gVaVgna~~ 353 (406)
.++..||+-||.-+++.+ ..|||.-|++.
T Consensus 808 ~TLMCGDGTNDVGALK~A-----hVGVALL~~~~ 836 (1160)
T KOG0209|consen 808 VTLMCGDGTNDVGALKQA-----HVGVALLNNPE 836 (1160)
T ss_pred EEEEecCCCcchhhhhhc-----ccceehhcCCh
Confidence 589999999999999997 58998766553
No 326
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=24.21 E-value=2e+02 Score=24.87 Aligned_cols=54 Identities=11% Similarity=0.086 Sum_probs=38.3
Q ss_pred CEEEEEecCCccCCCCCCCC----ccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHH
Q 015439 117 KIAIFSDYDGTLSPIVDDPD----RAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYE 170 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~~~~p~----~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~ 170 (406)
.+++.+|+|+|+-|.-.++. .-.+-+..+..|..|.+.+ ..+++|--+...+..
T Consensus 18 P~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~ 76 (144)
T KOG4549|consen 18 PRLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIAS 76 (144)
T ss_pred eEEEEecccccccccccCcccCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHH
Confidence 57888999999998554432 1224577889999999985 777887666655443
No 327
>PRK14558 pyrH uridylate kinase; Provisional
Probab=24.14 E-value=1.7e+02 Score=27.29 Aligned_cols=63 Identities=16% Similarity=0.130 Sum_probs=38.4
Q ss_pred HHhccCCEEEEEecCCccCCCC-CCCCccC---CC-hhHH---------HHHHHHHhc-CCEEEEcCCChhhHHHHhC
Q 015439 111 SEAKKKKIAIFSDYDGTLSPIV-DDPDRAI---MS-DGMR---------SAVRNVAKY-FPTAIITGRSRDKVYELVG 173 (406)
Q Consensus 111 ~~~~~k~~lI~lD~DGTL~~~~-~~p~~~~---~s-~~~~---------~aL~~L~~~-~~v~I~SGR~~~~l~~~~~ 173 (406)
...+.+..++++|.||-..... .+|+... ++ .++. ++++-+.+. .++.|++|+....+..++.
T Consensus 143 ~~l~a~~l~~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~g~~~~d~~a~~~a~~~gi~v~I~ng~~~~~l~~~l~ 220 (231)
T PRK14558 143 VEMKADILIKATKVDGIYDKDPKKFPDAKKIDHLTFSEAIKMGLKVMDTEAFSICKKYGITILVINFFEPGNLLKALK 220 (231)
T ss_pred HHcCCCEEEEEecCCeeEccCCCCCCCCeEcccccHHHHHHcCcccccHHHHHHHHHCCCCEEEEeCCCCCHHHHHHC
Confidence 3567778888999999998532 1232222 22 1111 333333344 4899999998888877763
No 328
>COG1608 Predicted archaeal kinase [General function prediction only]
Probab=24.11 E-value=3e+02 Score=26.42 Aligned_cols=20 Identities=25% Similarity=0.494 Sum_probs=16.3
Q ss_pred HHhccCCEEEEEecCCccCC
Q 015439 111 SEAKKKKIAIFSDYDGTLSP 130 (406)
Q Consensus 111 ~~~~~k~~lI~lD~DGTL~~ 130 (406)
...+-.+.++++|.||-+..
T Consensus 158 ~~l~pd~v~f~tdVdGVy~~ 177 (252)
T COG1608 158 KELKPDRVIFLTDVDGVYDR 177 (252)
T ss_pred HHhCCCEEEEEecCCceecC
Confidence 35577788899999999876
No 329
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=23.71 E-value=1.1e+02 Score=32.66 Aligned_cols=55 Identities=15% Similarity=0.131 Sum_probs=42.5
Q ss_pred CEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhc-C-CEEEEcCCChhhHHHHhC
Q 015439 117 KIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKY-F-PTAIITGRSRDKVYELVG 173 (406)
Q Consensus 117 ~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~-~-~v~I~SGR~~~~l~~~~~ 173 (406)
...++.-.||++..... ....+-++..++|++|.+. . +++++||.+...+..+.+
T Consensus 342 ~~~~~v~~~~~~~g~i~--~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~ 398 (536)
T TIGR01512 342 KTIVHVARDGTYLGYIL--LSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVAR 398 (536)
T ss_pred CeEEEEEECCEEEEEEE--EeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHH
Confidence 45566677888876332 1235678999999999998 6 799999999998888775
No 330
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=23.27 E-value=48 Score=32.07 Aligned_cols=17 Identities=24% Similarity=0.243 Sum_probs=14.4
Q ss_pred ccCCEEEEEecCCccCC
Q 015439 114 KKKKIAIFSDYDGTLSP 130 (406)
Q Consensus 114 ~~k~~lI~lD~DGTL~~ 130 (406)
..+++.+++|+|+||..
T Consensus 86 ~~~kk~lVLDLDeTLvH 102 (262)
T KOG1605|consen 86 TVGRKTLVLDLDETLVH 102 (262)
T ss_pred cCCCceEEEeCCCcccc
Confidence 56678889999999886
No 331
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=23.20 E-value=1.1e+02 Score=27.34 Aligned_cols=35 Identities=14% Similarity=0.033 Sum_probs=29.5
Q ss_pred CCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC
Q 015439 139 IMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG 173 (406)
Q Consensus 139 ~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 173 (406)
.+-+.+.+.|+.+.+.+ +++|+||.....+..+..
T Consensus 87 ~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~ 122 (202)
T TIGR01490 87 ILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLAR 122 (202)
T ss_pred hccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHH
Confidence 35678999999998885 899999999988887764
No 332
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=22.66 E-value=95 Score=35.89 Aligned_cols=35 Identities=11% Similarity=0.021 Sum_probs=30.7
Q ss_pred CCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHhC
Q 015439 139 IMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELVG 173 (406)
Q Consensus 139 ~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 173 (406)
.+-+++.++|+++++.+ .|+++|||+...+..+.+
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~ 603 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAK 603 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHH
Confidence 45689999999999995 899999999999888764
No 333
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=22.44 E-value=1.5e+02 Score=29.28 Aligned_cols=48 Identities=17% Similarity=0.081 Sum_probs=34.0
Q ss_pred EEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcC-CEEEEcCCChhhHHHHh
Q 015439 119 AIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYF-PTAIITGRSRDKVYELV 172 (406)
Q Consensus 119 lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~ 172 (406)
.++||-||.|-.. ...-|...+++..|++.+ .++++|--+.....+..
T Consensus 24 tfifDcDGVlW~g------~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~ 72 (306)
T KOG2882|consen 24 TFIFDCDGVLWLG------EKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYM 72 (306)
T ss_pred EEEEcCCcceeec------CCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHH
Confidence 4778999999972 223456778888888887 68888776666555443
No 334
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=22.34 E-value=71 Score=28.84 Aligned_cols=43 Identities=26% Similarity=0.245 Sum_probs=31.8
Q ss_pred HHHHHHHHHHcCCCCCCCccEEEEeCC-cCCHHHHHHHHhCCCceEEEecC
Q 015439 301 GKAVEFLLESLGLSDSDDVLPIYIGDD-RTDEDAFKVLRKGNRGYGILVSS 350 (406)
Q Consensus 301 G~Al~~Ll~~lg~~~~~~~~viaiGD~-~NDedMf~~~~~~~~G~gVaVgn 350 (406)
+.|+++-++.++++.+ +++.|||. .||+=.=. +..-++|.|..
T Consensus 96 ~~~fr~Al~~m~l~~~---~vvmVGDqL~TDVlggn----r~G~~tIlV~P 139 (175)
T COG2179 96 GRAFRRALKEMNLPPE---EVVMVGDQLFTDVLGGN----RAGMRTILVEP 139 (175)
T ss_pred HHHHHHHHHHcCCChh---HEEEEcchhhhhhhccc----ccCcEEEEEEE
Confidence 7899999999999987 89999996 46662211 11246888864
No 335
>cd04242 AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes glutamate-dependent ATP cleavage; G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, in the first and controlling step of proline (and, in mammals, ornithine) biosynthesis. G5K is subject to feedback allosteric inhibition by proline or ornithine. In microorganisms and plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. Microbial G5K generally consists of two domains: a catalytic G5K domain and one PUA (pseudo uridine synthases and archaeosine-specific transglycosylases) domain, and some lack the PUA domain. G5K requires free Mg for activity, it is tetrameric, and it aggregates to higher forms in a proline-dependent way. G5K lacking the PUA domain remains tetrameric, active, and proline-inhibitable, but the Mg requir
Probab=22.24 E-value=1.3e+02 Score=28.48 Aligned_cols=20 Identities=20% Similarity=0.318 Sum_probs=16.2
Q ss_pred HHhccCCEEEEEecCCccCC
Q 015439 111 SEAKKKKIAIFSDYDGTLSP 130 (406)
Q Consensus 111 ~~~~~k~~lI~lD~DGTL~~ 130 (406)
...+.+..++++|.||-+..
T Consensus 153 ~~l~Ad~liilTDVdGvy~~ 172 (251)
T cd04242 153 GLVNADLLILLSDVDGLYDK 172 (251)
T ss_pred HHcCCCEEEEecCcCEEEeC
Confidence 45677778889999999976
No 336
>PRK14556 pyrH uridylate kinase; Provisional
Probab=21.74 E-value=2e+02 Score=27.59 Aligned_cols=63 Identities=10% Similarity=0.077 Sum_probs=41.1
Q ss_pred HHhccCCEEEEEecCCccCCCC-CCCCccC---CC------hh----HHHHHHHHHhc-CCEEEEcCCChhhHHHHhC
Q 015439 111 SEAKKKKIAIFSDYDGTLSPIV-DDPDRAI---MS------DG----MRSAVRNVAKY-FPTAIITGRSRDKVYELVG 173 (406)
Q Consensus 111 ~~~~~k~~lI~lD~DGTL~~~~-~~p~~~~---~s------~~----~~~aL~~L~~~-~~v~I~SGR~~~~l~~~~~ 173 (406)
...+....++++|.||-..... .+|+-.. ++ .. -..+++.+.+. .+++|+.|+....+.+++.
T Consensus 161 ~~l~Ad~Lii~TdVDGVYd~DP~~~p~A~~i~~I~~~e~~~~~l~vmd~~A~~~a~~~gIpi~I~ng~~~~~L~~~l~ 238 (249)
T PRK14556 161 VEIGADALLKATTVNGVYDKDPNKYSDAKRFDKVTFSEVVSKELNVMDLGAFTQCRDFGIPIYVFDLTQPNALVDAVL 238 (249)
T ss_pred HHcCCCEEEEEeCCCccCCCCCCCCCCceEeeEEchhhhcccchHhHHHHHHHHHHHCCCcEEEECCCCchHHHHHHc
Confidence 3567777888899999987422 2232111 11 11 12456666665 4899999999999999884
No 337
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=21.72 E-value=67 Score=30.52 Aligned_cols=17 Identities=35% Similarity=0.284 Sum_probs=14.8
Q ss_pred EEEEeCCcCCHHHHHHH
Q 015439 321 PIYIGDDRTDEDAFKVL 337 (406)
Q Consensus 321 viaiGD~~NDedMf~~~ 337 (406)
++++||+.+|+.+-+.+
T Consensus 187 ~i~vGDs~~DI~aAk~A 203 (237)
T TIGR01672 187 RIHYGDSDNDITAAKEA 203 (237)
T ss_pred eEEEeCCHHHHHHHHHC
Confidence 79999999999877775
No 338
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=21.72 E-value=1.7e+02 Score=28.39 Aligned_cols=58 Identities=21% Similarity=0.186 Sum_probs=37.8
Q ss_pred cCCEEEEEecCCccCCCCCC---------------------CCccCCChhHHHHHHHHHhcC-------CEEEEcCCChh
Q 015439 115 KKKIAIFSDYDGTLSPIVDD---------------------PDRAIMSDGMRSAVRNVAKYF-------PTAIITGRSRD 166 (406)
Q Consensus 115 ~k~~lI~lD~DGTL~~~~~~---------------------p~~~~~s~~~~~aL~~L~~~~-------~v~I~SGR~~~ 166 (406)
.++.=|+||-|++|.....+ |-..-+-.....+|.+|++.+ .++|+|.|+..
T Consensus 119 ~~qlRIAFDgDaVLfsDesE~vy~~~GL~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~ap 198 (264)
T PF06189_consen 119 DDQLRIAFDGDAVLFSDESERVYQEQGLEAFHEHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAP 198 (264)
T ss_pred CCceEEEEcCCeEeecCcchHhHHhccHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCc
Confidence 45566899999999973211 111112245667777777652 48999999987
Q ss_pred hHHHHh
Q 015439 167 KVYELV 172 (406)
Q Consensus 167 ~l~~~~ 172 (406)
.-.+.+
T Consensus 199 ah~RvI 204 (264)
T PF06189_consen 199 AHERVI 204 (264)
T ss_pred hhHHHH
Confidence 765554
No 339
>CHL00202 argB acetylglutamate kinase; Provisional
Probab=21.62 E-value=2.4e+02 Score=27.42 Aligned_cols=56 Identities=29% Similarity=0.383 Sum_probs=30.1
Q ss_pred HHhccCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcCCEEEEcCCChhhHHHH
Q 015439 111 SEAKKKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYFPTAIITGRSRDKVYEL 171 (406)
Q Consensus 111 ~~~~~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~ 171 (406)
...+..+.++++|.||-+.+. .+|+ ..++.-..+.++++.... .+||....+++..
T Consensus 191 ~~l~Ad~li~lTdv~Gv~~~~-~d~~-~~i~~i~~~e~~~l~~~g---~~tGGM~~Kl~aa 246 (284)
T CHL00202 191 AKLNAEKLILLTDTPGILADI-NDPN-SLISTLNIKEARNLASTG---IISGGMIPKVNCC 246 (284)
T ss_pred HHhCCCEEEEEeCChhhcCCC-CCCC-CccccccHHHHHHHHhcC---CCCCCHHHHHHHH
Confidence 455667888999999999753 2232 222222222333333322 3466666666553
No 340
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=21.46 E-value=1.4e+02 Score=27.83 Aligned_cols=36 Identities=17% Similarity=0.006 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHcCCCCCCCccEEEEeCC-cCCHHHHHHH
Q 015439 300 KGKAVEFLLESLGLSDSDDVLPIYIGDD-RTDEDAFKVL 337 (406)
Q Consensus 300 KG~Al~~Ll~~lg~~~~~~~~viaiGD~-~NDedMf~~~ 337 (406)
+...++.+++++|.... ..+++|||+ .+|+.+=+.+
T Consensus 197 ~~~~~~~~~~~~~~~~~--~~~~~vGD~~~~Di~~a~~~ 233 (242)
T TIGR01459 197 YPAIFHKALKECSNIPK--NRMLMVGDSFYTDILGANRL 233 (242)
T ss_pred CHHHHHHHHHHcCCCCc--ccEEEECCCcHHHHHHHHHC
Confidence 35577888889986432 269999999 6999875554
No 341
>PRK14557 pyrH uridylate kinase; Provisional
Probab=21.06 E-value=3.4e+02 Score=25.85 Aligned_cols=73 Identities=12% Similarity=0.160 Sum_probs=41.5
Q ss_pred HhccCCEEEE-EecCCccCCCC-CCCCccCCCh---------hH----HHHHHHHHhc-CCEEEEcCCChhhHHHHhCCc
Q 015439 112 EAKKKKIAIF-SDYDGTLSPIV-DDPDRAIMSD---------GM----RSAVRNVAKY-FPTAIITGRSRDKVYELVGLT 175 (406)
Q Consensus 112 ~~~~k~~lI~-lD~DGTL~~~~-~~p~~~~~s~---------~~----~~aL~~L~~~-~~v~I~SGR~~~~l~~~~~l~ 175 (406)
..+....+++ .|.||-..... .+|+...++. .. ..+++-..+. .+++|++|+....+.+++.-.
T Consensus 151 ~l~Ad~li~~ttdVdGvY~~DP~~~~~Ak~i~~i~~~e~~~~~~~~~~~~A~~~a~~~gi~v~I~ng~~~~~l~~~l~g~ 230 (247)
T PRK14557 151 EMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVVRQNIQVMDQAALLLARDYNLPAHVFNFDEPGVMRRICLGE 230 (247)
T ss_pred HhCCCEEEEecCCcCEeECCCCCCCCCCEEeeEEChhhhcccCHHHHHHHHHHHHHHCCCcEEEEeCCCChHHHHHHcCC
Confidence 4555566666 49999988522 2232222111 11 1222333333 489999999999999988532
Q ss_pred CceEEccCCceEeCC
Q 015439 176 ELYYAGSHGMDIMGP 190 (406)
Q Consensus 176 ~~~li~~nGa~I~~~ 190 (406)
. .|..|...
T Consensus 231 ~------~GT~i~~~ 239 (247)
T PRK14557 231 H------VGTLINDD 239 (247)
T ss_pred C------CcEEEecC
Confidence 1 46666433
No 342
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=21.02 E-value=2.3e+02 Score=31.46 Aligned_cols=62 Identities=23% Similarity=0.292 Sum_probs=38.0
Q ss_pred HHhccCCEEEEEecCCccCCCCCCCCccC-------------------------CChhHHHHHHHHHhc-CCEEEEcCCC
Q 015439 111 SEAKKKKIAIFSDYDGTLSPIVDDPDRAI-------------------------MSDGMRSAVRNVAKY-FPTAIITGRS 164 (406)
Q Consensus 111 ~~~~~k~~lI~lD~DGTL~~~~~~p~~~~-------------------------~s~~~~~aL~~L~~~-~~v~I~SGR~ 164 (406)
...+....++++|.||-+.....+|+... |-+... +...+.+. .+++|++|+.
T Consensus 178 ~~l~Ad~LiilTDVdGVy~~dP~~~~a~~I~~i~~~~~~~~i~~~~~~~~~tGGM~~Kl~-aa~~a~~~gi~v~I~~g~~ 256 (715)
T TIGR01092 178 LELKADLLILLSDVEGLYDGPPSDDDSKLIDTFYKEKHQGEITFGTKSRLGRGGMTAKVK-AAVWAAYGGTPVIIASGTA 256 (715)
T ss_pred HHcCCCEEEEEeCCCeeeCCCCCCCCCeEeeeecccchhhhhccCcccccCCCCchHHHH-HHHHHHHCCCeEEEeCCCC
Confidence 35566778888999999875322222111 222222 23333334 4799999998
Q ss_pred hhhHHHHhC
Q 015439 165 RDKVYELVG 173 (406)
Q Consensus 165 ~~~l~~~~~ 173 (406)
...+.+++.
T Consensus 257 ~~~l~~~l~ 265 (715)
T TIGR01092 257 PKNITKVVE 265 (715)
T ss_pred cchHHHHhc
Confidence 888888874
No 343
>cd02966 TlpA_like_family TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.
Probab=20.99 E-value=2.2e+02 Score=21.74 Aligned_cols=79 Identities=10% Similarity=0.193 Sum_probs=38.2
Q ss_pred hHHhhCCccchhHHHHHH-HhccCCEEEEEecCCccCCCCCCCCccCCChhHHHHHHHHHhcCCEEEEcCCChhhHHHHh
Q 015439 94 SWMLKYPSALKYFEKIMS-EAKKKKIAIFSDYDGTLSPIVDDPDRAIMSDGMRSAVRNVAKYFPTAIITGRSRDKVYELV 172 (406)
Q Consensus 94 ~w~~~~p~~L~~f~~i~~-~~~~k~~lI~lD~DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~ 172 (406)
.|-..+...+..+..+.. +....-.++++++|+. .+ ++.++.+++.. .++.+.++... .+.+.+
T Consensus 29 ~~C~~C~~~~~~l~~~~~~~~~~~~~~~~v~~d~~-~~-----------~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~ 93 (116)
T cd02966 29 SWCPPCRAEMPELEALAKEYKDDGVEVVGVNVDDD-DP-----------AAVKAFLKKYG--ITFPVLLDPDG-ELAKAY 93 (116)
T ss_pred ccChhHHHHhHHHHHHHHHhCCCCeEEEEEECCCC-CH-----------HHHHHHHHHcC--CCcceEEcCcc-hHHHhc
Confidence 344445555666666653 3334456777777755 11 23444444432 24444444432 344444
Q ss_pred C---CcCceEEccCCceE
Q 015439 173 G---LTELYYAGSHGMDI 187 (406)
Q Consensus 173 ~---l~~~~li~~nGa~I 187 (406)
+ .|.++++-.+|-.+
T Consensus 94 ~~~~~P~~~l~d~~g~v~ 111 (116)
T cd02966 94 GVRGLPTTFLIDRDGRIR 111 (116)
T ss_pred CcCccceEEEECCCCcEE
Confidence 3 34455555556444
No 344
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=20.86 E-value=1.8e+02 Score=28.27 Aligned_cols=42 Identities=36% Similarity=0.373 Sum_probs=30.2
Q ss_pred HHHHHHHHHcCCCCCCCccEEEEeCC-cCCHHHHHHHHhCCCce-EEEecCC
Q 015439 302 KAVEFLLESLGLSDSDDVLPIYIGDD-RTDEDAFKVLRKGNRGY-GILVSSV 351 (406)
Q Consensus 302 ~Al~~Ll~~lg~~~~~~~~viaiGD~-~NDedMf~~~~~~~~G~-gVaVgna 351 (406)
...+..++.++...+ .+++|||+ .+|+.+=+.+ |+ ++.|..+
T Consensus 194 ~i~~~al~~~~~~~~---~~~mVGD~~~TDI~~a~~~-----G~~t~LV~TG 237 (269)
T COG0647 194 AIYEAALEKLGLDRS---EVLMVGDRLDTDILGAKAA-----GLDTLLVLTG 237 (269)
T ss_pred HHHHHHHHHhCCCcc---cEEEEcCCchhhHHHHHHc-----CCCEEEEccC
Confidence 456788889998776 79999997 5788765543 44 5666543
No 345
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=20.29 E-value=2.9e+02 Score=26.02 Aligned_cols=60 Identities=20% Similarity=0.254 Sum_probs=0.0
Q ss_pred ccchhHHHHHHHhccC-CEEEEEec--CCccCCCCCCCCccCCChhHHHHHHHHHhc-CCEEEEcC--CChhhHHHHh
Q 015439 101 SALKYFEKIMSEAKKK-KIAIFSDY--DGTLSPIVDDPDRAIMSDGMRSAVRNVAKY-FPTAIITG--RSRDKVYELV 172 (406)
Q Consensus 101 ~~L~~f~~i~~~~~~k-~~lI~lD~--DGTL~~~~~~p~~~~~s~~~~~aL~~L~~~-~~v~I~SG--R~~~~l~~~~ 172 (406)
+.++-++-+..+..-. ..+|++|+ |||+.. -..+.++++++. ..-+|++| |+.+.+...+
T Consensus 146 ~~~~~~~~~~~~~~~g~~~ii~tdi~~dGt~~G------------~~~~li~~l~~~~~ipvi~~GGi~s~edi~~l~ 211 (234)
T PRK13587 146 TELNLFSFVRQLSDIPLGGIIYTDIAKDGKMSG------------PNFELTGQLVKATTIPVIASGGIRHQQDIQRLA 211 (234)
T ss_pred CCCCHHHHHHHHHHcCCCEEEEecccCcCCCCc------------cCHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHH
No 346
>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=20.28 E-value=33 Score=29.58 Aligned_cols=70 Identities=23% Similarity=0.365 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHHcCCCCCCCccEEEEeCCcCCHHH-HHHHHhCCCceEEEecCCC------------CC--ccceEEeCC
Q 015439 299 NKGKAVEFLLESLGLSDSDDVLPIYIGDDRTDEDA-FKVLRKGNRGYGILVSSVP------------KE--TKAFYSLRD 363 (406)
Q Consensus 299 sKG~Al~~Ll~~lg~~~~~~~~viaiGD~~NDedM-f~~~~~~~~G~gVaVgna~------------~~--t~A~y~l~~ 363 (406)
.||.-+..|..+..+... |.-++-|||-+--... |.+ ||.+++|..- |+ ..|.-++.+
T Consensus 56 ~k~a~iN~iRT~~li~~a-DvVVvrFGekYKQWNaAfDA------g~a~AlgKplI~lh~~~~~HpLKEvda~A~a~~et 128 (141)
T PF11071_consen 56 HKGAKINAIRTRTLIEKA-DVVVVRFGEKYKQWNAAFDA------GYAAALGKPLITLHPEELHHPLKEVDAAALAVAET 128 (141)
T ss_pred chhhhhhHHHHHHHHhhC-CEEEEEechHHHHHHHHhhH------HHHHHcCCCeEEecchhccccHHHHhHhhHhhhCC
Confidence 566666666667666654 3568899997743321 333 6777776531 12 357777889
Q ss_pred HHHHHHHHHHHH
Q 015439 364 PSEVQEFLLSLV 375 (406)
Q Consensus 364 ~~eV~~fL~~L~ 375 (406)
|+.|.+.|+-++
T Consensus 129 ~~Qvv~iL~Yv~ 140 (141)
T PF11071_consen 129 PEQVVEILRYVL 140 (141)
T ss_pred HHHHHHHHHHHh
Confidence 999999887654
Done!