Query 015441
Match_columns 406
No_of_seqs 195 out of 1536
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 12:41:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015441.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015441hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vkn_A N-acetyl-gamma-glutamyl 100.0 4.2E-95 1.4E-99 725.5 33.1 340 61-406 11-351 (351)
2 3dr3_A N-acetyl-gamma-glutamyl 100.0 5.9E-90 2E-94 686.3 28.7 326 63-400 4-337 (337)
3 1xyg_A Putative N-acetyl-gamma 100.0 6.3E-88 2.2E-92 678.1 33.1 341 63-406 16-359 (359)
4 2nqt_A N-acetyl-gamma-glutamyl 100.0 3.8E-87 1.3E-91 670.2 36.7 334 63-406 9-352 (352)
5 2ozp_A N-acetyl-gamma-glutamyl 100.0 4.1E-86 1.4E-90 661.8 34.9 336 63-406 4-345 (345)
6 3hsk_A Aspartate-semialdehyde 100.0 3.2E-74 1.1E-78 581.1 25.9 322 56-392 11-377 (381)
7 4dpl_A Malonyl-COA/succinyl-CO 100.0 5.4E-74 1.9E-78 576.3 26.2 308 60-392 4-353 (359)
8 4dpk_A Malonyl-COA/succinyl-CO 100.0 5.4E-74 1.9E-78 576.3 25.2 308 60-392 4-353 (359)
9 2ep5_A 350AA long hypothetical 100.0 4.1E-73 1.4E-77 568.8 24.4 315 62-392 3-346 (350)
10 3pwk_A Aspartate-semialdehyde 100.0 5.3E-71 1.8E-75 555.0 25.4 301 62-393 1-344 (366)
11 1ys4_A Aspartate-semialdehyde 100.0 2E-70 6.8E-75 550.0 26.7 315 62-392 7-351 (354)
12 3tz6_A Aspartate-semialdehyde 100.0 3E-70 1E-74 545.7 25.8 294 64-392 2-342 (344)
13 3uw3_A Aspartate-semialdehyde 100.0 6.5E-70 2.2E-74 548.7 20.1 299 63-392 4-376 (377)
14 3pzr_A Aspartate-semialdehyde 100.0 1.3E-69 4.4E-74 545.3 21.0 297 64-391 1-367 (370)
15 2r00_A Aspartate-semialdehyde 100.0 1.3E-68 4.3E-73 533.5 26.1 300 62-392 2-333 (336)
16 2hjs_A USG-1 protein homolog; 100.0 1.6E-67 5.4E-72 526.3 24.8 299 62-393 5-336 (340)
17 2yv3_A Aspartate-semialdehyde 100.0 2.7E-67 9.2E-72 522.9 23.2 296 64-392 1-329 (331)
18 1t4b_A Aspartate-semialdehyde 100.0 1.5E-62 5.2E-67 494.7 18.0 298 63-390 1-366 (367)
19 1rm4_O Glyceraldehyde 3-phosph 100.0 4.6E-42 1.6E-46 341.0 24.5 289 63-391 1-332 (337)
20 1gad_O D-glyceraldehyde-3-phos 100.0 2.1E-42 7.1E-47 343.2 17.9 290 63-390 1-328 (330)
21 3cps_A Glyceraldehyde 3-phosph 100.0 7E-40 2.4E-44 327.2 25.2 291 61-390 15-349 (354)
22 1hdg_O Holo-D-glyceraldehyde-3 100.0 6.7E-40 2.3E-44 325.4 23.6 287 64-390 1-329 (332)
23 3cmc_O GAPDH, glyceraldehyde-3 100.0 1E-39 3.6E-44 324.2 23.1 290 63-391 1-330 (334)
24 1u8f_O GAPDH, glyceraldehyde-3 100.0 3.4E-39 1.2E-43 321.1 26.1 292 62-391 2-332 (335)
25 2x5j_O E4PDH, D-erythrose-4-ph 100.0 2.9E-38 1E-42 314.5 20.7 295 62-392 1-335 (339)
26 3e5r_O PP38, glyceraldehyde-3- 100.0 1.6E-37 5.5E-42 309.0 24.9 289 62-390 2-333 (337)
27 3b1j_A Glyceraldehyde 3-phosph 100.0 3.4E-37 1.2E-41 306.7 21.6 292 62-391 1-334 (339)
28 1cf2_P Protein (glyceraldehyde 100.0 4.3E-38 1.5E-42 313.5 14.1 272 63-375 1-301 (337)
29 2g82_O GAPDH, glyceraldehyde-3 100.0 2.1E-36 7.1E-41 299.9 24.7 286 64-390 1-326 (331)
30 2d2i_A Glyceraldehyde 3-phosph 100.0 1.8E-36 6E-41 304.6 24.4 290 62-393 1-336 (380)
31 3lvf_P GAPDH 1, glyceraldehyde 100.0 1.9E-32 6.4E-37 269.9 27.1 291 61-390 2-333 (338)
32 2b4r_O Glyceraldehyde-3-phosph 100.0 1.6E-32 5.5E-37 272.0 26.6 287 63-390 11-342 (345)
33 2yyy_A Glyceraldehyde-3-phosph 100.0 2.6E-33 8.9E-38 279.5 20.5 272 62-375 1-308 (343)
34 1b7g_O Protein (glyceraldehyde 100.0 9E-34 3.1E-38 282.6 15.8 271 63-374 1-300 (340)
35 1obf_O Glyceraldehyde 3-phosph 100.0 7E-32 2.4E-36 266.9 25.4 288 63-390 1-331 (335)
36 2ep7_A GAPDH, glyceraldehyde-3 100.0 1.9E-32 6.6E-37 271.4 20.5 287 62-390 1-337 (342)
37 3doc_A Glyceraldehyde 3-phosph 100.0 2.5E-32 8.7E-37 268.9 18.2 291 62-391 1-332 (335)
38 3hja_A GAPDH, glyceraldehyde-3 100.0 1.8E-31 6E-36 264.3 23.4 288 60-390 18-354 (356)
39 4dib_A GAPDH, glyceraldehyde 3 100.0 2.1E-32 7.2E-37 269.9 16.4 292 62-391 3-333 (345)
40 3h9e_O Glyceraldehyde-3-phosph 100.0 1.2E-31 4.2E-36 265.1 18.6 298 61-401 5-345 (346)
41 3pym_A GAPDH 3, glyceraldehyde 100.0 2.6E-31 9E-36 261.4 18.6 288 63-390 1-329 (332)
42 3v1y_O PP38, glyceraldehyde-3- 100.0 2.7E-31 9.2E-36 261.8 18.5 289 63-391 3-334 (337)
43 3ids_C GAPDH, glyceraldehyde-3 100.0 2E-31 6.9E-36 264.2 16.9 292 62-392 1-352 (359)
44 2czc_A Glyceraldehyde-3-phosph 99.9 5.4E-27 1.8E-31 233.1 19.3 226 62-327 1-242 (334)
45 1nvm_B Acetaldehyde dehydrogen 99.5 2.7E-14 9.2E-19 140.5 7.7 216 62-325 3-229 (312)
46 4ina_A Saccharopine dehydrogen 98.4 8.8E-08 3E-12 97.0 1.8 192 63-275 1-210 (405)
47 4f3y_A DHPR, dihydrodipicolina 98.3 2.8E-07 9.5E-12 88.8 4.6 92 63-157 7-102 (272)
48 3ic5_A Putative saccharopine d 98.3 5.4E-07 1.9E-11 73.5 5.0 96 62-162 4-103 (118)
49 3ijp_A DHPR, dihydrodipicolina 98.3 8.4E-07 2.9E-11 86.0 6.8 98 58-157 16-117 (288)
50 1dih_A Dihydrodipicolinate red 98.0 5.3E-06 1.8E-10 79.7 6.8 93 62-156 4-100 (273)
51 3bio_A Oxidoreductase, GFO/IDH 98.0 1.7E-05 5.9E-10 77.0 8.6 87 63-159 9-96 (304)
52 3abi_A Putative uncharacterize 97.9 6.4E-06 2.2E-10 81.8 3.7 94 61-161 14-110 (365)
53 1f06_A MESO-diaminopimelate D- 97.7 8.5E-05 2.9E-09 72.6 9.3 86 63-159 3-89 (320)
54 3qy9_A DHPR, dihydrodipicolina 97.7 8.5E-05 2.9E-09 70.2 8.9 78 63-156 3-80 (243)
55 3dhn_A NAD-dependent epimerase 97.6 7.6E-05 2.6E-09 67.8 6.9 74 62-140 3-78 (227)
56 3qvo_A NMRA family protein; st 97.6 7.8E-05 2.7E-09 68.7 6.8 99 60-161 20-126 (236)
57 3i23_A Oxidoreductase, GFO/IDH 97.5 7.1E-05 2.4E-09 73.7 5.4 89 62-156 1-93 (349)
58 3euw_A MYO-inositol dehydrogen 97.5 7.5E-05 2.6E-09 73.1 5.2 87 62-156 3-93 (344)
59 4hkt_A Inositol 2-dehydrogenas 97.5 5.6E-05 1.9E-09 73.7 3.7 86 62-156 2-91 (331)
60 3f4l_A Putative oxidoreductase 97.5 0.00011 3.7E-09 72.1 5.7 88 62-156 1-93 (345)
61 3e82_A Putative oxidoreductase 97.4 0.00013 4.6E-09 72.2 5.8 87 61-156 5-95 (364)
62 2dc1_A L-aspartate dehydrogena 97.4 0.00019 6.4E-09 66.7 6.5 82 64-162 1-84 (236)
63 3ezy_A Dehydrogenase; structur 97.4 6.6E-05 2.3E-09 73.6 3.4 88 62-156 1-92 (344)
64 3e48_A Putative nucleoside-dip 97.4 0.00016 5.6E-09 68.1 5.9 94 64-160 1-106 (289)
65 1p9l_A Dihydrodipicolinate red 97.4 0.00021 7.3E-09 67.5 6.6 72 64-156 1-73 (245)
66 3evn_A Oxidoreductase, GFO/IDH 97.4 0.00017 5.8E-09 70.3 5.9 87 62-156 4-95 (329)
67 3kux_A Putative oxidoreductase 97.4 0.00024 8.2E-09 69.9 6.8 87 61-156 5-95 (352)
68 3uuw_A Putative oxidoreductase 97.4 0.00011 3.7E-09 70.8 4.2 86 63-156 6-94 (308)
69 3fhl_A Putative oxidoreductase 97.3 0.00023 8E-09 70.3 6.6 86 62-156 4-93 (362)
70 3db2_A Putative NADPH-dependen 97.3 0.00016 5.6E-09 71.1 5.4 88 61-156 3-94 (354)
71 3r6d_A NAD-dependent epimerase 97.3 0.00016 5.4E-09 65.7 4.9 99 62-161 4-109 (221)
72 3mz0_A Inositol 2-dehydrogenas 97.3 0.00018 6.1E-09 70.5 5.2 89 62-156 1-94 (344)
73 3dqp_A Oxidoreductase YLBE; al 97.3 0.0006 2E-08 61.7 8.4 95 64-162 1-108 (219)
74 3gdo_A Uncharacterized oxidore 97.3 0.00024 8.1E-09 70.2 6.0 86 62-156 4-93 (358)
75 4had_A Probable oxidoreductase 97.3 0.00015 5.2E-09 70.9 4.4 91 58-156 18-114 (350)
76 3o9z_A Lipopolysaccaride biosy 97.3 0.00034 1.2E-08 68.0 6.7 92 62-156 2-100 (312)
77 3e18_A Oxidoreductase; dehydro 97.3 0.00019 6.5E-09 71.0 4.8 86 63-156 5-93 (359)
78 1lc0_A Biliverdin reductase A; 97.3 0.00032 1.1E-08 67.5 6.3 86 60-156 4-93 (294)
79 3c24_A Putative oxidoreductase 97.3 0.00035 1.2E-08 66.6 6.5 93 59-162 7-104 (286)
80 3rc1_A Sugar 3-ketoreductase; 97.2 0.00016 5.5E-09 71.2 4.0 87 62-156 26-117 (350)
81 3h2s_A Putative NADH-flavin re 97.2 0.00039 1.3E-08 62.8 6.3 90 64-160 1-105 (224)
82 3oa2_A WBPB; oxidoreductase, s 97.2 0.00036 1.2E-08 67.9 6.3 92 62-156 2-101 (318)
83 4ew6_A D-galactose-1-dehydroge 97.2 0.00039 1.3E-08 68.1 6.4 83 63-156 25-109 (330)
84 3ec7_A Putative dehydrogenase; 97.2 0.00035 1.2E-08 69.0 5.6 89 62-156 22-115 (357)
85 3e9m_A Oxidoreductase, GFO/IDH 97.2 0.00022 7.7E-09 69.5 4.0 88 62-156 4-95 (330)
86 4gmf_A Yersiniabactin biosynth 97.1 0.0003 1E-08 70.3 4.8 88 60-156 4-98 (372)
87 3ohs_X Trans-1,2-dihydrobenzen 97.1 0.00032 1.1E-08 68.4 4.7 88 62-156 1-94 (334)
88 1hdo_A Biliverdin IX beta redu 97.1 0.00075 2.6E-08 59.7 6.8 31 64-95 4-34 (206)
89 1ydw_A AX110P-like protein; st 97.1 0.00026 9E-09 69.8 4.2 93 60-156 3-99 (362)
90 1tlt_A Putative oxidoreductase 97.1 0.00047 1.6E-08 66.7 5.8 85 63-156 5-93 (319)
91 3c1a_A Putative oxidoreductase 97.1 0.00026 8.8E-09 68.5 3.9 86 61-156 8-97 (315)
92 3ew7_A LMO0794 protein; Q8Y8U8 97.1 0.0007 2.4E-08 60.7 6.4 91 64-161 1-104 (221)
93 3q2i_A Dehydrogenase; rossmann 97.1 0.0002 6.9E-09 70.4 2.9 88 61-156 11-103 (354)
94 2ho3_A Oxidoreductase, GFO/IDH 97.1 0.00046 1.6E-08 66.9 5.4 87 63-156 1-90 (325)
95 2ejw_A HDH, homoserine dehydro 97.1 0.001 3.4E-08 65.6 7.8 84 63-157 3-96 (332)
96 2i76_A Hypothetical protein; N 97.0 0.00027 9.1E-09 67.3 2.9 92 62-164 1-94 (276)
97 3cea_A MYO-inositol 2-dehydrog 97.0 0.00051 1.7E-08 67.0 4.9 89 61-156 6-99 (346)
98 3m2t_A Probable dehydrogenase; 97.0 0.00079 2.7E-08 66.5 6.1 87 63-156 5-96 (359)
99 1xea_A Oxidoreductase, GFO/IDH 97.0 0.00077 2.6E-08 65.3 5.7 87 62-156 1-91 (323)
100 2ixa_A Alpha-N-acetylgalactosa 96.9 0.00055 1.9E-08 69.6 4.7 93 62-156 19-119 (444)
101 1h6d_A Precursor form of gluco 96.9 0.00077 2.6E-08 68.5 5.6 93 61-156 81-178 (433)
102 3slg_A PBGP3 protein; structur 96.9 0.00062 2.1E-08 66.5 4.8 34 63-96 24-57 (372)
103 3do5_A HOM, homoserine dehydro 96.9 0.00061 2.1E-08 67.0 4.6 92 63-156 2-112 (327)
104 4ezb_A Uncharacterized conserv 96.9 0.002 7E-08 62.6 8.1 96 61-161 22-123 (317)
105 2ahr_A Putative pyrroline carb 96.9 0.00067 2.3E-08 63.4 4.3 90 63-162 3-93 (259)
106 4huj_A Uncharacterized protein 96.9 0.0013 4.3E-08 60.5 6.0 94 62-163 22-117 (220)
107 2nu8_A Succinyl-COA ligase [AD 96.9 0.00086 3E-08 64.6 5.1 91 61-162 5-99 (288)
108 1ebf_A Homoserine dehydrogenas 96.8 0.00064 2.2E-08 67.7 3.9 93 61-156 2-112 (358)
109 1zh8_A Oxidoreductase; TM0312, 96.8 0.00079 2.7E-08 65.9 4.5 91 59-156 14-110 (340)
110 2x4g_A Nucleoside-diphosphate- 96.8 0.0016 5.6E-08 62.4 6.4 72 64-139 14-87 (342)
111 2r6j_A Eugenol synthase 1; phe 96.8 0.00069 2.3E-08 64.8 3.5 95 60-156 8-112 (318)
112 3ip3_A Oxidoreductase, putativ 96.8 0.00032 1.1E-08 68.6 1.2 90 62-156 1-95 (337)
113 3m2p_A UDP-N-acetylglucosamine 96.7 0.0017 5.9E-08 61.8 6.1 72 62-139 1-72 (311)
114 4gqa_A NAD binding oxidoreduct 96.7 0.00058 2E-08 68.5 2.7 92 58-156 21-124 (412)
115 1r0k_A 1-deoxy-D-xylulose 5-ph 96.7 0.0014 4.8E-08 65.8 5.4 36 63-98 4-40 (388)
116 3moi_A Probable dehydrogenase; 96.7 0.00072 2.5E-08 67.4 3.0 87 62-156 1-92 (387)
117 3keo_A Redox-sensing transcrip 96.6 0.0017 5.8E-08 60.0 5.0 94 61-165 82-185 (212)
118 2zcu_A Uncharacterized oxidore 96.6 0.0013 4.5E-08 61.4 4.4 96 65-161 1-105 (286)
119 3doj_A AT3G25530, dehydrogenas 96.6 0.0018 6.3E-08 62.5 5.5 92 60-161 18-117 (310)
120 3ing_A Homoserine dehydrogenas 96.6 0.003 1E-07 62.0 7.0 93 63-157 4-115 (325)
121 2pv7_A T-protein [includes: ch 96.6 0.0047 1.6E-07 59.3 8.3 78 62-161 20-101 (298)
122 1j5p_A Aspartate dehydrogenase 96.6 0.0074 2.5E-07 57.2 9.4 81 62-160 11-92 (253)
123 3qha_A Putative oxidoreductase 96.6 0.0022 7.5E-08 61.6 5.8 89 61-161 13-107 (296)
124 1xq6_A Unknown protein; struct 96.6 0.0014 4.7E-08 59.8 4.1 34 62-95 3-37 (253)
125 2bka_A CC3, TAT-interacting pr 96.6 0.0053 1.8E-07 56.0 7.8 32 64-95 19-51 (242)
126 1oc2_A DTDP-glucose 4,6-dehydr 96.5 0.0027 9.2E-08 61.1 5.7 33 63-95 4-37 (348)
127 2c5a_A GDP-mannose-3', 5'-epim 96.5 0.0045 1.5E-07 60.9 7.3 33 62-95 28-60 (379)
128 3ggo_A Prephenate dehydrogenas 96.5 0.0046 1.6E-07 60.1 7.2 92 63-161 33-130 (314)
129 1jay_A Coenzyme F420H2:NADP+ o 96.5 0.00075 2.6E-08 61.0 1.4 96 64-163 1-101 (212)
130 3ius_A Uncharacterized conserv 96.5 0.0029 1E-07 59.2 5.6 90 62-161 4-104 (286)
131 3mtj_A Homoserine dehydrogenas 96.5 0.0033 1.1E-07 64.3 6.3 85 63-156 10-107 (444)
132 2z2v_A Hypothetical protein PH 96.5 0.0011 3.6E-08 66.1 2.6 92 63-160 16-109 (365)
133 3e8x_A Putative NAD-dependent 96.4 0.0036 1.2E-07 57.1 6.0 31 64-95 22-52 (236)
134 3sc6_A DTDP-4-dehydrorhamnose 96.4 0.002 6.9E-08 60.4 4.1 33 62-95 4-36 (287)
135 3ehe_A UDP-glucose 4-epimerase 96.4 0.0039 1.3E-07 59.3 6.0 32 63-96 1-32 (313)
136 3g0o_A 3-hydroxyisobutyrate de 96.4 0.0058 2E-07 58.7 7.2 89 62-161 6-104 (303)
137 2vt3_A REX, redox-sensing tran 96.4 0.0028 9.6E-08 58.6 4.7 93 62-163 84-180 (215)
138 4fb5_A Probable oxidoreductase 96.4 0.0043 1.5E-07 60.8 6.3 87 63-156 25-122 (393)
139 4b4o_A Epimerase family protei 96.3 0.0044 1.5E-07 58.6 6.1 61 64-139 1-61 (298)
140 2b69_A UDP-glucuronate decarbo 96.3 0.0096 3.3E-07 57.3 8.4 32 63-95 27-58 (343)
141 2wm3_A NMRA-like family domain 96.3 0.0024 8.2E-08 60.4 3.9 33 63-95 5-37 (299)
142 1oi7_A Succinyl-COA synthetase 96.3 0.0033 1.1E-07 60.6 4.8 90 62-162 6-99 (288)
143 1yb4_A Tartronic semialdehyde 96.3 0.0034 1.2E-07 59.5 4.9 89 62-161 2-98 (295)
144 3upl_A Oxidoreductase; rossman 96.3 0.0032 1.1E-07 64.4 5.0 94 61-156 21-136 (446)
145 3g79_A NDP-N-acetyl-D-galactos 96.3 0.0052 1.8E-07 63.4 6.5 98 62-162 17-150 (478)
146 2jl1_A Triphenylmethane reduct 96.2 0.0026 9E-08 59.5 3.9 96 65-161 2-108 (287)
147 1qyc_A Phenylcoumaran benzylic 96.2 0.0021 7.3E-08 60.7 3.2 32 63-95 4-35 (308)
148 2a35_A Hypothetical protein PA 96.2 0.0071 2.4E-07 53.8 6.5 34 62-95 4-38 (215)
149 3b1f_A Putative prephenate deh 96.2 0.0036 1.2E-07 59.4 4.8 91 63-161 6-103 (290)
150 3c8m_A Homoserine dehydrogenas 96.2 0.0029 9.9E-08 62.1 4.1 94 63-157 6-119 (331)
151 3ruf_A WBGU; rossmann fold, UD 96.2 0.0066 2.3E-07 58.5 6.6 33 62-95 24-56 (351)
152 4h3v_A Oxidoreductase domain p 96.2 0.0014 4.9E-08 64.2 1.8 87 63-156 6-103 (390)
153 3btv_A Galactose/lactose metab 96.2 0.00077 2.6E-08 68.5 -0.3 90 63-156 20-123 (438)
154 2p2s_A Putative oxidoreductase 96.1 0.0049 1.7E-07 59.9 5.3 86 63-156 4-94 (336)
155 1qyd_A Pinoresinol-lariciresin 96.1 0.0044 1.5E-07 58.7 4.9 32 63-95 4-35 (313)
156 2ph5_A Homospermidine synthase 96.1 0.0057 1.9E-07 63.0 5.8 98 61-160 11-115 (480)
157 2q1s_A Putative nucleotide sug 96.1 0.0087 3E-07 58.7 7.0 33 63-95 32-64 (377)
158 4egb_A DTDP-glucose 4,6-dehydr 96.1 0.0035 1.2E-07 60.4 4.0 36 61-96 22-58 (346)
159 3c1o_A Eugenol synthase; pheny 96.1 0.0038 1.3E-07 59.5 4.2 33 62-95 3-35 (321)
160 3oh8_A Nucleoside-diphosphate 96.1 0.013 4.4E-07 60.5 8.5 65 63-139 147-211 (516)
161 3d1l_A Putative NADP oxidoredu 96.1 0.0044 1.5E-07 58.0 4.5 91 64-163 11-106 (266)
162 2nvw_A Galactose/lactose metab 96.1 0.0027 9.3E-08 65.4 3.2 86 63-152 39-132 (479)
163 3pef_A 6-phosphogluconate dehy 96.1 0.0042 1.4E-07 59.0 4.3 87 64-161 2-97 (287)
164 4id9_A Short-chain dehydrogena 96.1 0.0057 1.9E-07 58.9 5.3 71 61-139 17-87 (347)
165 1vpd_A Tartronate semialdehyde 96.1 0.002 6.9E-08 61.3 2.1 90 62-162 4-102 (299)
166 4gbj_A 6-phosphogluconate dehy 96.0 0.013 4.4E-07 56.5 7.8 92 61-162 3-100 (297)
167 2ydy_A Methionine adenosyltran 96.0 0.004 1.4E-07 59.1 4.1 33 62-95 1-33 (315)
168 3i6i_A Putative leucoanthocyan 96.0 0.0043 1.5E-07 60.0 4.3 32 64-96 11-42 (346)
169 2dt5_A AT-rich DNA-binding pro 96.0 0.0052 1.8E-07 56.6 4.5 86 61-156 78-168 (211)
170 3oj0_A Glutr, glutamyl-tRNA re 96.0 0.0018 6.2E-08 55.1 1.2 91 63-161 21-112 (144)
171 1n2s_A DTDP-4-, DTDP-glucose o 95.9 0.0073 2.5E-07 56.8 5.3 29 65-95 2-30 (299)
172 2vns_A Metalloreductase steap3 95.9 0.0061 2.1E-07 55.7 4.6 91 62-163 27-119 (215)
173 2bll_A Protein YFBG; decarboxy 95.9 0.0068 2.3E-07 58.0 4.9 32 64-95 1-32 (345)
174 3gg2_A Sugar dehydrogenase, UD 95.9 0.007 2.4E-07 61.9 5.3 96 62-161 1-124 (450)
175 3qsg_A NAD-binding phosphogluc 95.9 0.0043 1.5E-07 60.0 3.5 92 63-162 24-120 (312)
176 2yy7_A L-threonine dehydrogena 95.9 0.0041 1.4E-07 58.8 3.2 34 62-95 1-35 (312)
177 3vps_A TUNA, NAD-dependent epi 95.8 0.0092 3.2E-07 56.3 5.7 33 62-95 6-38 (321)
178 4dll_A 2-hydroxy-3-oxopropiona 95.8 0.0064 2.2E-07 59.0 4.6 90 62-161 30-126 (320)
179 1y7t_A Malate dehydrogenase; N 95.8 0.0041 1.4E-07 60.5 3.1 33 62-94 3-41 (327)
180 2glx_A 1,5-anhydro-D-fructose 95.8 0.008 2.7E-07 58.0 5.2 85 64-156 1-90 (332)
181 3v5n_A Oxidoreductase; structu 95.8 0.0046 1.6E-07 62.3 3.6 92 63-156 37-138 (417)
182 2h78_A Hibadh, 3-hydroxyisobut 95.8 0.006 2E-07 58.3 4.1 90 62-161 2-99 (302)
183 1z82_A Glycerol-3-phosphate de 95.8 0.019 6.4E-07 55.8 7.7 99 61-162 12-114 (335)
184 3ko8_A NAD-dependent epimerase 95.8 0.024 8.2E-07 53.5 8.2 31 64-95 1-31 (312)
185 2axq_A Saccharopine dehydrogen 95.8 0.0039 1.3E-07 64.1 2.9 94 63-160 23-120 (467)
186 3oqb_A Oxidoreductase; structu 95.8 0.0027 9.3E-08 62.8 1.7 90 61-156 4-111 (383)
187 2gas_A Isoflavone reductase; N 95.8 0.0053 1.8E-07 57.9 3.6 32 63-95 2-33 (307)
188 3nkl_A UDP-D-quinovosamine 4-d 95.7 0.026 9E-07 47.3 7.5 92 62-160 3-100 (141)
189 3pid_A UDP-glucose 6-dehydroge 95.7 0.0083 2.8E-07 61.1 4.9 97 61-161 34-155 (432)
190 2raf_A Putative dinucleotide-b 95.7 0.022 7.5E-07 51.7 7.3 71 63-162 19-93 (209)
191 2g5c_A Prephenate dehydrogenas 95.7 0.013 4.6E-07 55.1 6.0 92 63-161 1-98 (281)
192 3pdu_A 3-hydroxyisobutyrate de 95.7 0.0043 1.5E-07 59.0 2.5 88 63-161 1-97 (287)
193 2yv1_A Succinyl-COA ligase [AD 95.6 0.0095 3.3E-07 57.5 5.0 91 62-163 12-106 (294)
194 3ay3_A NAD-dependent epimerase 95.6 0.0061 2.1E-07 56.6 3.5 33 62-95 1-33 (267)
195 3a06_A 1-deoxy-D-xylulose 5-ph 95.6 0.006 2.1E-07 60.7 3.4 93 64-156 4-113 (376)
196 3dty_A Oxidoreductase, GFO/IDH 95.6 0.0036 1.2E-07 62.6 1.8 93 62-156 11-113 (398)
197 4e21_A 6-phosphogluconate dehy 95.6 0.0089 3E-07 59.3 4.7 90 63-162 22-118 (358)
198 1e6u_A GDP-fucose synthetase; 95.6 0.016 5.3E-07 55.0 6.2 30 64-94 4-33 (321)
199 3hg7_A D-isomer specific 2-hyd 95.6 0.019 6.6E-07 56.2 6.9 85 64-160 141-231 (324)
200 3cky_A 2-hydroxymethyl glutara 95.6 0.0048 1.7E-07 58.7 2.6 91 62-162 3-101 (301)
201 3evt_A Phosphoglycerate dehydr 95.6 0.028 9.6E-07 55.0 8.1 85 64-160 138-228 (324)
202 1vl0_A DTDP-4-dehydrorhamnose 95.5 0.011 3.7E-07 55.4 4.9 31 64-95 13-43 (292)
203 1xgk_A Nitrogen metabolite rep 95.5 0.0084 2.9E-07 58.8 4.2 32 63-95 5-36 (352)
204 2d59_A Hypothetical protein PH 95.5 0.016 5.5E-07 49.8 5.5 78 63-154 22-103 (144)
205 2cvz_A Dehydrogenase, 3-hydrox 95.5 0.0086 2.9E-07 56.4 4.0 87 63-161 1-92 (289)
206 3sxp_A ADP-L-glycero-D-mannohe 95.5 0.015 5E-07 56.6 5.7 33 63-95 10-43 (362)
207 2f1k_A Prephenate dehydrogenas 95.5 0.018 6.3E-07 54.0 6.1 88 64-160 1-92 (279)
208 1yqg_A Pyrroline-5-carboxylate 95.5 0.014 4.8E-07 54.3 5.2 89 64-162 1-91 (263)
209 1y1p_A ARII, aldehyde reductas 95.4 0.033 1.1E-06 52.9 8.0 32 63-95 11-42 (342)
210 2rh8_A Anthocyanidin reductase 95.4 0.02 6.8E-07 54.8 6.4 34 61-95 7-40 (338)
211 2c20_A UDP-glucose 4-epimerase 95.4 0.011 3.9E-07 56.2 4.6 32 63-95 1-32 (330)
212 2yv2_A Succinyl-COA synthetase 95.4 0.017 5.8E-07 55.8 5.8 90 62-162 12-106 (297)
213 3hhp_A Malate dehydrogenase; M 95.4 0.0089 3E-07 58.3 3.8 72 64-139 1-79 (312)
214 3gt0_A Pyrroline-5-carboxylate 95.4 0.0058 2E-07 56.8 2.4 93 62-162 1-100 (247)
215 1lss_A TRK system potassium up 95.4 0.023 7.8E-07 46.9 5.9 76 64-142 5-82 (140)
216 4b8w_A GDP-L-fucose synthase; 95.4 0.0099 3.4E-07 55.7 4.0 27 62-88 5-31 (319)
217 3u3x_A Oxidoreductase; structu 95.4 0.0055 1.9E-07 60.5 2.3 86 63-156 26-116 (361)
218 3pp8_A Glyoxylate/hydroxypyruv 95.4 0.024 8.1E-07 55.3 6.6 85 64-160 140-230 (315)
219 3dtt_A NADP oxidoreductase; st 95.3 0.009 3.1E-07 55.6 3.5 93 63-162 19-127 (245)
220 2gn4_A FLAA1 protein, UDP-GLCN 95.3 0.024 8.2E-07 55.2 6.6 32 64-95 22-54 (344)
221 2uyy_A N-PAC protein; long-cha 95.3 0.012 4.1E-07 56.5 4.5 88 63-161 30-126 (316)
222 3hdj_A Probable ornithine cycl 95.3 0.0081 2.8E-07 58.5 3.2 92 63-161 121-215 (313)
223 2q1w_A Putative nucleotide sug 95.3 0.016 5.4E-07 55.7 5.2 32 63-95 21-52 (333)
224 2ew2_A 2-dehydropantoate 2-red 95.3 0.021 7.2E-07 54.1 6.0 97 62-162 2-111 (316)
225 2o3j_A UDP-glucose 6-dehydroge 95.3 0.011 3.6E-07 61.0 4.1 33 62-95 8-41 (481)
226 4dgs_A Dehydrogenase; structur 95.3 0.036 1.2E-06 54.7 7.7 82 64-160 172-259 (340)
227 2pzm_A Putative nucleotide sug 95.2 0.025 8.7E-07 54.2 6.5 31 64-95 21-51 (330)
228 2v6g_A Progesterone 5-beta-red 95.2 0.021 7.3E-07 55.0 5.9 33 64-96 2-38 (364)
229 1sb8_A WBPP; epimerase, 4-epim 95.2 0.018 6.2E-07 55.6 5.4 32 63-95 27-58 (352)
230 1y81_A Conserved hypothetical 95.2 0.033 1.1E-06 47.6 6.4 83 63-159 14-102 (138)
231 1smk_A Malate dehydrogenase, g 95.2 0.0069 2.4E-07 59.2 2.3 33 62-94 7-40 (326)
232 2q3e_A UDP-glucose 6-dehydroge 95.2 0.011 3.6E-07 60.6 3.8 32 62-94 4-36 (467)
233 1z7e_A Protein aRNA; rossmann 95.1 0.024 8.2E-07 60.2 6.3 34 62-95 314-347 (660)
234 1b8p_A Protein (malate dehydro 95.1 0.011 3.7E-07 57.8 3.3 32 63-94 5-42 (329)
235 1ek6_A UDP-galactose 4-epimera 95.1 0.015 5.3E-07 55.7 4.3 33 62-95 1-33 (348)
236 1ur5_A Malate dehydrogenase; o 95.0 0.024 8.1E-07 54.9 5.5 75 62-139 1-80 (309)
237 2duw_A Putative COA-binding pr 95.0 0.029 9.9E-07 48.3 5.5 82 64-157 14-101 (145)
238 1qp8_A Formate dehydrogenase; 95.0 0.076 2.6E-06 51.3 8.9 81 64-160 125-211 (303)
239 2izz_A Pyrroline-5-carboxylate 95.0 0.014 4.9E-07 56.5 3.7 93 63-162 22-121 (322)
240 3gvx_A Glycerate dehydrogenase 94.9 0.036 1.2E-06 53.4 6.4 82 64-160 123-210 (290)
241 3enk_A UDP-glucose 4-epimerase 94.9 0.031 1E-06 53.4 5.7 33 62-95 4-36 (341)
242 2hrz_A AGR_C_4963P, nucleoside 94.8 0.034 1.2E-06 53.2 6.1 32 64-95 15-52 (342)
243 4g2n_A D-isomer specific 2-hyd 94.8 0.036 1.2E-06 54.7 6.4 85 64-160 174-264 (345)
244 2hun_A 336AA long hypothetical 94.8 0.023 7.8E-07 54.2 4.7 32 64-95 4-36 (336)
245 2ggs_A 273AA long hypothetical 94.7 0.028 9.4E-07 51.9 4.9 29 65-95 2-30 (273)
246 2i99_A MU-crystallin homolog; 94.7 0.022 7.5E-07 55.1 4.3 92 62-161 134-228 (312)
247 2yq5_A D-isomer specific 2-hyd 94.7 0.055 1.9E-06 53.4 7.1 83 64-160 149-237 (343)
248 3l6d_A Putative oxidoreductase 94.7 0.013 4.3E-07 56.5 2.5 90 62-161 8-103 (306)
249 1np3_A Ketol-acid reductoisome 94.7 0.018 6.2E-07 56.3 3.6 87 64-160 17-108 (338)
250 4f6c_A AUSA reductase domain p 94.7 0.051 1.7E-06 54.1 7.0 33 62-95 68-100 (427)
251 1r6d_A TDP-glucose-4,6-dehydra 94.6 0.047 1.6E-06 52.1 6.5 32 64-95 1-37 (337)
252 1hye_A L-lactate/malate dehydr 94.6 0.026 8.8E-07 54.7 4.5 31 64-94 1-32 (313)
253 3jtm_A Formate dehydrogenase, 94.6 0.037 1.3E-06 54.7 5.7 86 64-160 165-257 (351)
254 1kew_A RMLB;, DTDP-D-glucose 4 94.6 0.024 8.3E-07 54.6 4.3 32 64-95 1-32 (361)
255 3i83_A 2-dehydropantoate 2-red 94.5 0.12 4.2E-06 49.7 9.2 108 62-176 1-120 (320)
256 2g1u_A Hypothetical protein TM 94.5 0.058 2E-06 46.1 6.2 79 63-144 19-99 (155)
257 1ks9_A KPA reductase;, 2-dehyd 94.5 0.058 2E-06 50.4 6.7 95 64-162 1-100 (291)
258 2hmt_A YUAA protein; RCK, KTN, 94.5 0.017 5.8E-07 47.9 2.6 31 63-95 6-36 (144)
259 1x7d_A Ornithine cyclodeaminas 94.5 0.015 5.1E-07 57.5 2.6 97 63-161 129-228 (350)
260 2p4q_A 6-phosphogluconate dehy 94.5 0.05 1.7E-06 56.2 6.6 94 61-162 8-112 (497)
261 2rcy_A Pyrroline carboxylate r 94.4 0.047 1.6E-06 50.6 5.7 83 64-161 5-93 (262)
262 1yj8_A Glycerol-3-phosphate de 94.4 0.022 7.4E-07 56.3 3.5 99 62-162 20-144 (375)
263 3llv_A Exopolyphosphatase-rela 94.4 0.021 7.2E-07 47.9 2.9 77 63-142 6-83 (141)
264 1omo_A Alanine dehydrogenase; 94.4 0.024 8.3E-07 55.2 3.8 93 62-161 124-219 (322)
265 1o6z_A MDH, malate dehydrogena 94.3 0.026 9E-07 54.4 3.9 31 64-94 1-32 (303)
266 1mld_A Malate dehydrogenase; o 94.3 0.02 7E-07 55.6 3.1 31 64-94 1-32 (314)
267 2cuk_A Glycerate dehydrogenase 94.3 0.088 3E-06 51.0 7.6 81 64-161 145-231 (311)
268 2c29_D Dihydroflavonol 4-reduc 94.3 0.027 9.2E-07 53.9 3.9 33 62-95 4-36 (337)
269 3obb_A Probable 3-hydroxyisobu 94.3 0.021 7.3E-07 55.1 3.1 88 63-161 3-99 (300)
270 3ktd_A Prephenate dehydrogenas 94.3 0.013 4.4E-07 57.8 1.6 91 61-161 6-103 (341)
271 4f6l_B AUSA reductase domain p 94.3 0.061 2.1E-06 55.0 6.7 34 61-95 148-181 (508)
272 4gwg_A 6-phosphogluconate dehy 94.2 0.058 2E-06 55.6 6.4 95 63-162 4-106 (484)
273 2g76_A 3-PGDH, D-3-phosphoglyc 94.2 0.06 2E-06 52.9 6.2 85 64-160 166-256 (335)
274 4hy3_A Phosphoglycerate oxidor 94.2 0.054 1.9E-06 53.9 6.0 85 64-160 177-267 (365)
275 3dfu_A Uncharacterized protein 94.2 0.032 1.1E-06 52.1 4.1 69 63-162 6-78 (232)
276 1vm6_A DHPR, dihydrodipicolina 94.2 0.058 2E-06 50.2 5.7 69 63-156 12-81 (228)
277 3k96_A Glycerol-3-phosphate de 94.2 0.036 1.2E-06 54.8 4.7 98 62-162 28-136 (356)
278 1bg6_A N-(1-D-carboxylethyl)-L 94.1 0.046 1.6E-06 52.9 5.2 94 64-160 5-110 (359)
279 3d4o_A Dipicolinate synthase s 94.1 0.066 2.3E-06 51.1 6.1 89 64-160 156-245 (293)
280 3tri_A Pyrroline-5-carboxylate 94.1 0.043 1.5E-06 52.1 4.8 103 63-176 3-112 (280)
281 4h7p_A Malate dehydrogenase; s 94.1 0.029 1E-06 55.4 3.7 32 63-94 24-61 (345)
282 1y6j_A L-lactate dehydrogenase 94.1 0.074 2.5E-06 51.7 6.5 74 62-140 6-85 (318)
283 3gpi_A NAD-dependent epimerase 94.0 0.091 3.1E-06 49.0 6.9 32 63-96 3-34 (286)
284 2pk3_A GDP-6-deoxy-D-LYXO-4-he 94.0 0.038 1.3E-06 52.3 4.3 34 61-95 10-43 (321)
285 1mx3_A CTBP1, C-terminal bindi 94.0 0.065 2.2E-06 52.8 6.0 86 64-160 169-260 (347)
286 3ba1_A HPPR, hydroxyphenylpyru 94.0 0.095 3.3E-06 51.3 7.2 83 64-161 165-253 (333)
287 2y0c_A BCEC, UDP-glucose dehyd 93.9 0.033 1.1E-06 57.3 3.9 30 63-94 8-37 (478)
288 2rir_A Dipicolinate synthase, 93.9 0.073 2.5E-06 50.9 6.1 89 64-160 158-247 (300)
289 1iuk_A Hypothetical protein TT 93.9 0.039 1.3E-06 47.2 3.7 79 63-153 13-95 (140)
290 3gg9_A D-3-phosphoglycerate de 93.9 0.034 1.2E-06 55.0 3.7 86 64-160 161-252 (352)
291 1x0v_A GPD-C, GPDH-C, glycerol 93.9 0.047 1.6E-06 53.0 4.7 98 64-163 9-128 (354)
292 3ajr_A NDP-sugar epimerase; L- 93.8 0.028 9.7E-07 53.1 3.0 31 65-95 1-32 (317)
293 1gdh_A D-glycerate dehydrogena 93.8 0.052 1.8E-06 52.9 4.8 87 64-160 147-239 (320)
294 2qyt_A 2-dehydropantoate 2-red 93.8 0.018 6E-07 54.9 1.5 97 59-162 4-120 (317)
295 4a7p_A UDP-glucose dehydrogena 93.8 0.13 4.6E-06 52.4 8.1 97 63-161 8-131 (446)
296 2gcg_A Glyoxylate reductase/hy 93.8 0.071 2.4E-06 52.0 5.8 85 64-160 156-247 (330)
297 2y1e_A 1-deoxy-D-xylulose 5-ph 93.8 0.065 2.2E-06 53.4 5.4 38 63-100 21-60 (398)
298 3oet_A Erythronate-4-phosphate 93.7 0.064 2.2E-06 53.6 5.5 82 64-160 120-211 (381)
299 3hn2_A 2-dehydropantoate 2-red 93.7 0.12 4E-06 49.7 7.1 96 62-162 1-106 (312)
300 1mv8_A GMD, GDP-mannose 6-dehy 93.7 0.042 1.5E-06 55.5 4.1 29 64-94 1-29 (436)
301 2pi1_A D-lactate dehydrogenase 93.6 0.061 2.1E-06 52.8 5.0 84 64-160 142-231 (334)
302 1dxy_A D-2-hydroxyisocaproate 93.6 0.12 4.1E-06 50.6 7.1 83 64-160 146-234 (333)
303 2eez_A Alanine dehydrogenase; 93.6 0.036 1.2E-06 54.8 3.4 93 64-161 167-268 (369)
304 3c7a_A Octopine dehydrogenase; 93.6 0.063 2.1E-06 53.4 5.2 97 62-160 1-117 (404)
305 1xdw_A NAD+-dependent (R)-2-hy 93.6 0.12 4E-06 50.6 7.0 82 64-159 147-234 (331)
306 1ff9_A Saccharopine reductase; 93.6 0.044 1.5E-06 55.9 4.0 92 64-159 4-99 (450)
307 4dqv_A Probable peptide synthe 93.6 0.041 1.4E-06 56.1 3.8 35 61-95 71-107 (478)
308 1rkx_A CDP-glucose-4,6-dehydra 93.6 0.056 1.9E-06 52.1 4.6 31 64-95 10-40 (357)
309 2x6t_A ADP-L-glycero-D-manno-h 93.5 0.052 1.8E-06 52.4 4.3 32 64-95 47-78 (357)
310 3fi9_A Malate dehydrogenase; s 93.5 0.022 7.4E-07 56.3 1.5 74 63-138 8-85 (343)
311 2iz1_A 6-phosphogluconate dehy 93.5 0.046 1.6E-06 56.0 4.1 91 64-162 6-106 (474)
312 1wwk_A Phosphoglycerate dehydr 93.4 0.09 3.1E-06 50.8 5.8 85 64-160 143-233 (307)
313 2nac_A NAD-dependent formate d 93.4 0.084 2.9E-06 53.0 5.6 87 64-160 192-284 (393)
314 3rft_A Uronate dehydrogenase; 93.4 0.069 2.4E-06 49.7 4.7 32 63-95 3-34 (267)
315 5mdh_A Malate dehydrogenase; o 93.3 0.02 6.9E-07 56.2 1.0 25 63-87 3-27 (333)
316 2gf2_A Hibadh, 3-hydroxyisobut 93.3 0.038 1.3E-06 52.2 2.9 87 64-160 1-95 (296)
317 1q0q_A 1-deoxy-D-xylulose 5-ph 93.3 0.081 2.8E-06 52.9 5.3 37 63-99 9-46 (406)
318 1lld_A L-lactate dehydrogenase 93.3 0.16 5.6E-06 48.5 7.3 74 63-140 7-86 (319)
319 2hk9_A Shikimate dehydrogenase 93.2 0.081 2.8E-06 50.0 5.0 87 64-160 130-222 (275)
320 4e12_A Diketoreductase; oxidor 93.2 0.11 3.8E-06 49.2 5.9 98 63-163 4-125 (283)
321 1f0y_A HCDH, L-3-hydroxyacyl-C 93.2 0.081 2.8E-06 50.4 5.0 30 63-94 15-44 (302)
322 2pgd_A 6-phosphogluconate dehy 93.2 0.096 3.3E-06 53.8 5.9 91 64-162 3-104 (482)
323 3pqe_A L-LDH, L-lactate dehydr 93.2 0.067 2.3E-06 52.3 4.5 73 63-139 5-83 (326)
324 1db3_A GDP-mannose 4,6-dehydra 93.1 0.062 2.1E-06 51.9 4.1 32 63-95 1-32 (372)
325 2vhw_A Alanine dehydrogenase; 93.1 0.051 1.7E-06 54.0 3.6 90 64-161 169-270 (377)
326 1ldn_A L-lactate dehydrogenase 93.1 0.078 2.7E-06 51.4 4.7 75 62-140 5-85 (316)
327 3ff4_A Uncharacterized protein 93.1 0.092 3.1E-06 44.0 4.5 84 63-162 4-92 (122)
328 2p4h_X Vestitone reductase; NA 93.0 0.12 4.2E-06 48.7 6.0 31 64-95 2-32 (322)
329 3k5p_A D-3-phosphoglycerate de 93.0 0.17 5.9E-06 51.1 7.3 84 64-161 157-246 (416)
330 2dbq_A Glyoxylate reductase; D 93.0 0.11 3.7E-06 50.8 5.6 85 64-160 151-241 (334)
331 2w2k_A D-mandelate dehydrogena 92.8 0.1 3.5E-06 51.4 5.2 88 64-161 164-258 (348)
332 1dlj_A UDP-glucose dehydrogena 92.8 0.042 1.4E-06 55.1 2.4 29 64-95 1-29 (402)
333 2x0j_A Malate dehydrogenase; o 92.7 0.067 2.3E-06 51.6 3.7 72 64-138 1-78 (294)
334 2d5c_A AROE, shikimate 5-dehyd 92.7 0.073 2.5E-06 49.8 3.8 84 65-160 118-207 (263)
335 4e5n_A Thermostable phosphite 92.7 0.082 2.8E-06 51.7 4.3 86 64-160 146-237 (330)
336 2p5y_A UDP-glucose 4-epimerase 92.6 0.15 5.2E-06 48.0 6.0 31 64-95 1-31 (311)
337 2o4c_A Erythronate-4-phosphate 92.6 0.11 3.7E-06 52.0 5.1 82 64-160 117-208 (380)
338 1pjc_A Protein (L-alanine dehy 92.6 0.08 2.7E-06 52.2 4.1 90 64-161 168-269 (361)
339 2zyd_A 6-phosphogluconate dehy 92.6 0.085 2.9E-06 54.2 4.4 91 64-162 16-116 (480)
340 1t2d_A LDH-P, L-lactate dehydr 92.6 0.13 4.5E-06 50.0 5.6 72 63-138 4-81 (322)
341 7mdh_A Protein (malate dehydro 92.5 0.064 2.2E-06 53.5 3.4 29 60-88 29-57 (375)
342 3d0o_A L-LDH 1, L-lactate dehy 92.5 0.094 3.2E-06 50.8 4.5 74 63-140 6-85 (317)
343 3k6j_A Protein F01G10.3, confi 92.5 0.24 8.3E-06 50.7 7.7 101 61-163 52-170 (460)
344 1sc6_A PGDH, D-3-phosphoglycer 92.5 0.22 7.4E-06 50.1 7.2 83 64-160 146-234 (404)
345 1ez4_A Lactate dehydrogenase; 92.5 0.084 2.9E-06 51.3 4.1 73 62-139 4-82 (318)
346 1n7h_A GDP-D-mannose-4,6-dehyd 92.5 0.12 4.1E-06 50.3 5.2 33 62-95 27-59 (381)
347 1t2a_A GDP-mannose 4,6 dehydra 92.5 0.12 4.1E-06 50.1 5.2 35 61-96 22-56 (375)
348 2j6i_A Formate dehydrogenase; 92.4 0.13 4.5E-06 50.9 5.5 87 64-160 165-258 (364)
349 1sny_A Sniffer CG10964-PA; alp 92.4 0.11 3.7E-06 47.9 4.5 33 63-95 21-55 (267)
350 2dpo_A L-gulonate 3-dehydrogen 92.3 0.1 3.5E-06 50.7 4.4 98 63-163 6-127 (319)
351 1oju_A MDH, malate dehydrogena 92.3 0.085 2.9E-06 50.8 3.7 72 64-139 1-79 (294)
352 1ygy_A PGDH, D-3-phosphoglycer 92.2 0.11 3.7E-06 54.1 4.7 85 64-160 143-233 (529)
353 3st7_A Capsular polysaccharide 92.2 0.083 2.8E-06 51.3 3.6 31 64-94 1-31 (369)
354 1i36_A Conserved hypothetical 92.2 0.11 3.6E-06 48.3 4.1 87 64-161 1-90 (264)
355 4fgw_A Glycerol-3-phosphate de 92.1 0.25 8.6E-06 49.5 7.1 105 57-162 28-154 (391)
356 3nep_X Malate dehydrogenase; h 92.1 0.091 3.1E-06 51.1 3.7 74 64-139 1-79 (314)
357 2ekl_A D-3-phosphoglycerate de 92.0 0.14 4.8E-06 49.6 5.0 85 64-160 143-233 (313)
358 3hwr_A 2-dehydropantoate 2-red 92.0 0.25 8.4E-06 47.6 6.7 93 63-162 19-123 (318)
359 1pgj_A 6PGDH, 6-PGDH, 6-phosph 92.0 0.11 3.7E-06 53.4 4.4 94 64-162 2-106 (478)
360 1txg_A Glycerol-3-phosphate de 92.0 0.15 5.2E-06 48.7 5.2 94 64-161 1-106 (335)
361 3gvi_A Malate dehydrogenase; N 91.8 0.12 4.2E-06 50.4 4.4 74 63-138 7-84 (324)
362 3ldh_A Lactate dehydrogenase; 91.8 0.14 4.9E-06 50.1 4.8 74 63-139 21-99 (330)
363 2d0i_A Dehydrogenase; structur 91.8 0.15 5.1E-06 49.9 4.9 84 64-160 147-236 (333)
364 3fwz_A Inner membrane protein 91.8 0.11 3.6E-06 43.8 3.4 92 62-156 6-102 (140)
365 3ego_A Probable 2-dehydropanto 91.7 0.12 4.1E-06 49.6 4.1 92 62-162 1-102 (307)
366 1j4a_A D-LDH, D-lactate dehydr 91.7 0.16 5.6E-06 49.5 5.1 84 64-160 147-236 (333)
367 4dio_A NAD(P) transhydrogenase 91.7 0.18 6.2E-06 50.8 5.5 94 64-161 191-314 (405)
368 1evy_A Glycerol-3-phosphate de 91.7 0.056 1.9E-06 52.9 1.7 95 65-162 17-127 (366)
369 2fp4_A Succinyl-COA ligase [GD 91.7 0.11 3.7E-06 50.4 3.7 88 64-162 14-106 (305)
370 3p2y_A Alanine dehydrogenase/p 91.7 0.18 6.1E-06 50.4 5.4 94 64-161 185-304 (381)
371 2yjz_A Metalloreductase steap4 90.9 0.033 1.1E-06 50.5 0.0 90 61-162 17-108 (201)
372 3au8_A 1-deoxy-D-xylulose 5-ph 91.6 0.14 4.8E-06 52.0 4.5 38 62-99 76-117 (488)
373 3p7m_A Malate dehydrogenase; p 91.6 0.18 6.1E-06 49.1 5.2 74 64-139 6-83 (321)
374 3ghy_A Ketopantoate reductase 91.5 0.22 7.5E-06 48.2 5.8 92 64-161 4-106 (335)
375 1yo6_A Putative carbonyl reduc 91.5 0.14 4.8E-06 46.3 4.1 32 64-95 4-36 (250)
376 1rpn_A GDP-mannose 4,6-dehydra 91.4 0.19 6.6E-06 47.6 5.1 34 62-96 13-46 (335)
377 3vku_A L-LDH, L-lactate dehydr 91.3 0.16 5.6E-06 49.6 4.7 72 63-139 9-86 (326)
378 1orr_A CDP-tyvelose-2-epimeras 91.3 0.17 5.9E-06 48.0 4.8 32 63-95 1-32 (347)
379 2zqz_A L-LDH, L-lactate dehydr 91.3 0.11 3.9E-06 50.6 3.5 72 63-139 9-86 (326)
380 3tl2_A Malate dehydrogenase; c 91.2 0.15 5.1E-06 49.6 4.2 73 63-138 8-87 (315)
381 2egg_A AROE, shikimate 5-dehyd 91.2 0.15 5.1E-06 48.9 4.1 93 64-160 142-241 (297)
382 1z45_A GAL10 bifunctional prot 91.1 0.2 7E-06 53.2 5.5 32 63-95 11-42 (699)
383 2c2x_A Methylenetetrahydrofola 90.9 0.34 1.2E-05 46.4 6.2 73 64-161 159-234 (281)
384 1id1_A Putative potassium chan 90.7 0.16 5.6E-06 43.1 3.5 76 64-142 4-84 (153)
385 2hjr_A Malate dehydrogenase; m 90.7 0.22 7.5E-06 48.5 4.8 73 62-138 13-91 (328)
386 1i24_A Sulfolipid biosynthesis 90.7 0.2 6.7E-06 48.9 4.5 35 60-95 8-42 (404)
387 1uay_A Type II 3-hydroxyacyl-C 90.6 0.16 5.5E-06 45.8 3.6 32 63-95 2-33 (242)
388 2ewd_A Lactate dehydrogenase,; 90.6 0.22 7.5E-06 48.0 4.7 32 62-94 3-34 (317)
389 2qrj_A Saccharopine dehydrogen 90.6 0.33 1.1E-05 48.7 6.1 80 63-161 214-302 (394)
390 4aj2_A L-lactate dehydrogenase 90.4 0.2 6.8E-06 49.1 4.2 75 62-139 18-97 (331)
391 2v6b_A L-LDH, L-lactate dehydr 90.4 0.27 9.2E-06 47.2 5.1 71 64-139 1-77 (304)
392 1eq2_A ADP-L-glycero-D-mannohe 90.3 0.27 9.1E-06 45.9 5.0 31 65-95 1-31 (310)
393 3d7l_A LIN1944 protein; APC893 89.9 0.4 1.4E-05 42.0 5.5 30 64-95 4-33 (202)
394 1edz_A 5,10-methylenetetrahydr 89.8 0.32 1.1E-05 47.5 5.1 89 64-161 178-277 (320)
395 3c85_A Putative glutathione-re 89.8 0.25 8.7E-06 43.0 4.1 77 64-142 40-118 (183)
396 3l4b_C TRKA K+ channel protien 89.8 0.15 5.1E-06 46.0 2.6 78 64-144 1-80 (218)
397 3ojo_A CAP5O; rossmann fold, c 89.6 0.39 1.3E-05 48.7 5.8 94 64-162 12-132 (431)
398 1guz_A Malate dehydrogenase; o 89.6 0.36 1.2E-05 46.5 5.3 31 64-95 1-32 (310)
399 1zcj_A Peroxisomal bifunctiona 89.3 1.1 3.7E-05 45.6 8.9 96 63-162 37-153 (463)
400 3don_A Shikimate dehydrogenase 89.1 0.39 1.3E-05 45.8 5.1 88 64-160 118-211 (277)
401 1fjh_A 3alpha-hydroxysteroid d 89.1 0.68 2.3E-05 42.2 6.6 31 64-95 2-32 (257)
402 2xxj_A L-LDH, L-lactate dehydr 89.1 0.29 1E-05 47.2 4.2 71 64-139 1-77 (310)
403 3phh_A Shikimate dehydrogenase 89.0 0.62 2.1E-05 44.2 6.3 84 64-160 119-210 (269)
404 1nyt_A Shikimate 5-dehydrogena 88.8 0.48 1.7E-05 44.5 5.5 89 64-160 120-215 (271)
405 3l07_A Bifunctional protein fo 88.8 0.46 1.6E-05 45.6 5.3 72 64-161 162-235 (285)
406 2z1m_A GDP-D-mannose dehydrata 88.7 0.4 1.4E-05 45.3 4.9 31 64-95 4-34 (345)
407 3g17_A Similar to 2-dehydropan 88.6 0.22 7.5E-06 47.3 2.9 94 62-162 1-99 (294)
408 3orf_A Dihydropteridine reduct 88.4 0.34 1.2E-05 44.5 4.1 35 60-95 19-53 (251)
409 3nzo_A UDP-N-acetylglucosamine 88.2 0.45 1.6E-05 47.1 5.1 32 64-95 36-67 (399)
410 3p2o_A Bifunctional protein fo 88.2 0.45 1.5E-05 45.6 4.8 75 64-165 161-237 (285)
411 3o8q_A Shikimate 5-dehydrogena 88.2 0.32 1.1E-05 46.4 3.7 90 64-160 127-222 (281)
412 3ngx_A Bifunctional protein fo 88.0 0.44 1.5E-05 45.5 4.6 73 64-162 151-225 (276)
413 3pwz_A Shikimate dehydrogenase 88.0 0.56 1.9E-05 44.5 5.3 91 64-160 121-216 (272)
414 3d64_A Adenosylhomocysteinase; 87.9 0.79 2.7E-05 47.3 6.8 86 64-160 278-365 (494)
415 2nm0_A Probable 3-oxacyl-(acyl 87.8 0.46 1.6E-05 43.9 4.5 31 64-95 22-52 (253)
416 1zej_A HBD-9, 3-hydroxyacyl-CO 87.7 0.7 2.4E-05 44.3 5.8 91 63-162 12-110 (293)
417 2aef_A Calcium-gated potassium 87.7 0.29 1E-05 44.5 3.1 75 63-142 9-84 (234)
418 2dkn_A 3-alpha-hydroxysteroid 87.6 0.6 2E-05 42.1 5.1 32 63-95 1-32 (255)
419 4e4y_A Short chain dehydrogena 87.4 0.52 1.8E-05 42.9 4.6 33 62-94 3-35 (244)
420 3mwd_B ATP-citrate synthase; A 87.4 0.97 3.3E-05 44.3 6.7 100 61-163 8-116 (334)
421 2dtx_A Glucose 1-dehydrogenase 87.2 0.49 1.7E-05 43.9 4.4 31 64-95 9-39 (264)
422 1x13_A NAD(P) transhydrogenase 87.1 0.61 2.1E-05 46.7 5.2 94 64-161 173-294 (401)
423 3kb6_A D-lactate dehydrogenase 87.0 0.55 1.9E-05 45.9 4.7 83 64-160 142-230 (334)
424 4a26_A Putative C-1-tetrahydro 86.9 0.54 1.8E-05 45.4 4.5 74 64-161 166-241 (300)
425 2csu_A 457AA long hypothetical 86.8 0.79 2.7E-05 46.7 6.0 87 64-163 9-100 (457)
426 4a5o_A Bifunctional protein fo 86.8 0.84 2.9E-05 43.8 5.8 75 64-165 162-238 (286)
427 1b0a_A Protein (fold bifunctio 86.8 0.47 1.6E-05 45.6 4.0 75 64-165 160-236 (288)
428 1a4i_A Methylenetetrahydrofola 86.7 1 3.4E-05 43.5 6.3 72 64-161 166-239 (301)
429 1gy8_A UDP-galactose 4-epimera 86.4 0.66 2.3E-05 45.0 5.0 31 64-95 3-34 (397)
430 1v8b_A Adenosylhomocysteinase; 86.3 0.74 2.5E-05 47.3 5.4 86 64-160 258-345 (479)
431 1hyh_A L-hicdh, L-2-hydroxyiso 86.0 0.91 3.1E-05 43.3 5.7 75 63-141 1-81 (309)
432 1l7d_A Nicotinamide nucleotide 85.7 1.3 4.5E-05 43.7 6.9 94 64-161 173-296 (384)
433 1a5z_A L-lactate dehydrogenase 85.5 0.55 1.9E-05 45.3 3.8 73 64-141 1-79 (319)
434 2i6t_A Ubiquitin-conjugating e 85.4 0.81 2.8E-05 44.0 5.0 71 63-139 14-87 (303)
435 3u62_A Shikimate dehydrogenase 85.3 0.38 1.3E-05 45.2 2.5 88 65-161 110-202 (253)
436 3vtf_A UDP-glucose 6-dehydroge 85.1 0.43 1.5E-05 48.6 3.0 34 59-94 17-50 (444)
437 1udb_A Epimerase, UDP-galactos 85.0 0.75 2.6E-05 43.6 4.5 30 65-95 2-31 (338)
438 3fr7_A Putative ketol-acid red 84.8 0.81 2.8E-05 47.3 4.8 93 64-160 55-156 (525)
439 3afn_B Carbonyl reductase; alp 84.6 0.86 2.9E-05 41.3 4.6 31 64-95 8-38 (258)
440 3mog_A Probable 3-hydroxybutyr 84.5 0.84 2.9E-05 46.9 4.9 96 64-162 6-123 (483)
441 1gpj_A Glutamyl-tRNA reductase 84.5 0.43 1.5E-05 47.7 2.6 91 64-161 168-268 (404)
442 1p77_A Shikimate 5-dehydrogena 84.4 0.41 1.4E-05 45.1 2.3 89 64-160 120-215 (272)
443 3h9u_A Adenosylhomocysteinase; 84.3 0.88 3E-05 46.2 4.8 85 64-159 212-298 (436)
444 3tnl_A Shikimate dehydrogenase 84.2 0.41 1.4E-05 46.5 2.2 93 64-159 155-263 (315)
445 2o23_A HADH2 protein; HSD17B10 84.1 1.3 4.3E-05 40.4 5.5 31 64-95 13-43 (265)
446 2wtb_A MFP2, fatty acid multif 83.8 1.2 4.2E-05 47.9 6.0 98 63-163 312-431 (725)
447 3gvp_A Adenosylhomocysteinase 83.3 1.5 5E-05 44.5 5.9 85 64-159 221-307 (435)
448 4ea9_A Perosamine N-acetyltran 82.8 1.9 6.5E-05 38.8 6.1 36 62-99 11-46 (220)
449 2yut_A Putative short-chain ox 82.8 0.93 3.2E-05 39.6 3.9 27 65-94 2-28 (207)
450 1pzg_A LDH, lactate dehydrogen 82.4 1.2 4.2E-05 43.2 4.8 35 61-97 7-41 (331)
451 2ehd_A Oxidoreductase, oxidore 81.9 1.3 4.6E-05 39.6 4.6 33 62-95 4-36 (234)
452 3l9w_A Glutathione-regulated p 81.8 1.1 3.6E-05 45.1 4.3 77 64-143 5-82 (413)
453 2d4a_B Malate dehydrogenase; a 81.7 0.37 1.2E-05 46.5 0.8 73 65-140 1-78 (308)
454 4a27_A Synaptic vesicle membra 81.7 0.54 1.8E-05 45.5 2.0 95 64-159 144-238 (349)
455 3fbt_A Chorismate mutase and s 81.6 1.1 3.9E-05 42.7 4.2 85 64-159 123-214 (282)
456 1wdk_A Fatty oxidation complex 81.2 0.95 3.3E-05 48.7 3.9 98 63-163 314-433 (715)
457 1uzm_A 3-oxoacyl-[acyl-carrier 80.6 0.99 3.4E-05 41.2 3.3 31 64-95 16-46 (247)
458 3dfz_A SIRC, precorrin-2 dehyd 80.3 2.6 8.9E-05 38.8 6.0 84 64-154 32-117 (223)
459 3dii_A Short-chain dehydrogena 79.7 0.97 3.3E-05 41.3 2.9 31 63-94 2-32 (247)
460 2cfc_A 2-(R)-hydroxypropyl-COM 79.5 2.1 7.1E-05 38.6 5.1 32 63-95 2-33 (250)
461 3un1_A Probable oxidoreductase 79.5 2 7E-05 39.6 5.1 31 64-95 29-59 (260)
462 2vn8_A Reticulon-4-interacting 79.5 2.9 9.8E-05 40.7 6.4 88 64-160 185-281 (375)
463 1wma_A Carbonyl reductase [NAD 79.3 1.4 4.8E-05 40.0 3.9 32 63-95 4-36 (276)
464 3rui_A Ubiquitin-like modifier 79.3 1.3 4.4E-05 43.5 3.8 99 64-165 35-175 (340)
465 2ag5_A DHRS6, dehydrogenase/re 79.1 1.2 4.2E-05 40.4 3.4 31 64-95 7-37 (246)
466 3a28_C L-2.3-butanediol dehydr 79.1 0.92 3.1E-05 41.6 2.5 30 64-94 3-32 (258)
467 3ce6_A Adenosylhomocysteinase; 79.1 2 6.9E-05 44.2 5.4 86 64-160 275-362 (494)
468 2ph3_A 3-oxoacyl-[acyl carrier 78.9 2 6.7E-05 38.6 4.7 33 64-97 2-34 (245)
469 3h5n_A MCCB protein; ubiquitin 78.3 2.2 7.6E-05 41.8 5.2 93 63-158 118-240 (353)
470 3n58_A Adenosylhomocysteinase; 77.9 2.3 8E-05 43.3 5.3 84 64-158 248-333 (464)
471 1zud_1 Adenylyltransferase THI 77.8 0.82 2.8E-05 42.6 1.8 30 64-94 29-58 (251)
472 2obn_A Hypothetical protein; s 77.7 0.67 2.3E-05 45.7 1.2 103 64-170 8-120 (349)
473 1pqw_A Polyketide synthase; ro 77.5 1.3 4.4E-05 38.8 2.9 96 64-160 40-138 (198)
474 1x1t_A D(-)-3-hydroxybutyrate 76.6 1.1 3.9E-05 41.1 2.4 30 64-94 5-34 (260)
475 4e3z_A Putative oxidoreductase 76.4 2.4 8.1E-05 39.1 4.6 33 63-96 26-58 (272)
476 3p19_A BFPVVD8, putative blue 76.3 0.93 3.2E-05 42.1 1.7 31 64-95 17-47 (266)
477 4b7c_A Probable oxidoreductase 76.2 0.89 3.1E-05 43.5 1.6 96 64-160 151-249 (336)
478 1zsy_A Mitochondrial 2-enoyl t 76.0 1.6 5.6E-05 42.2 3.5 94 64-160 169-271 (357)
479 1iz0_A Quinone oxidoreductase; 75.9 1.7 5.9E-05 40.9 3.5 87 64-159 127-218 (302)
480 1cyd_A Carbonyl reductase; sho 75.5 3.3 0.00011 37.0 5.2 31 64-95 8-38 (244)
481 3bfp_A Acetyltransferase; LEFT 75.4 2 6.8E-05 38.0 3.6 35 62-98 2-36 (194)
482 3two_A Mannitol dehydrogenase; 75.2 3.4 0.00012 39.7 5.5 86 64-159 178-265 (348)
483 1jw9_B Molybdopterin biosynthe 75.2 0.66 2.2E-05 43.2 0.3 92 64-158 32-152 (249)
484 3vtz_A Glucose 1-dehydrogenase 75.2 3.4 0.00012 38.3 5.3 32 63-95 14-45 (269)
485 4dvj_A Putative zinc-dependent 75.1 2.2 7.6E-05 41.5 4.2 94 64-158 173-269 (363)
486 3jyo_A Quinate/shikimate dehyd 75.0 1.2 4E-05 42.5 2.1 94 64-160 128-230 (283)
487 4eye_A Probable oxidoreductase 75.0 1.4 4.9E-05 42.4 2.7 95 64-159 161-257 (342)
488 3vh1_A Ubiquitin-like modifier 74.5 2.3 8E-05 44.7 4.3 30 64-94 328-357 (598)
489 2bd0_A Sepiapterin reductase; 74.5 2.6 9E-05 37.8 4.2 23 64-86 3-25 (244)
490 1xg5_A ARPG836; short chain de 74.4 3.7 0.00013 37.9 5.4 31 64-95 33-63 (279)
491 3o26_A Salutaridine reductase; 74.4 2.4 8E-05 39.4 4.0 31 64-95 13-43 (311)
492 3tqh_A Quinone oxidoreductase; 74.3 1.3 4.4E-05 42.2 2.2 87 64-158 154-244 (321)
493 1dhr_A Dihydropteridine reduct 73.9 4.6 0.00016 36.4 5.8 32 63-95 7-38 (241)
494 1lu9_A Methylene tetrahydromet 73.9 3 0.0001 39.1 4.6 33 64-98 120-152 (287)
495 3nrc_A Enoyl-[acyl-carrier-pro 73.7 2 6.7E-05 40.0 3.3 31 64-95 27-59 (280)
496 1fmc_A 7 alpha-hydroxysteroid 73.7 3.1 0.00011 37.4 4.5 31 64-95 12-42 (255)
497 1xa0_A Putative NADPH dependen 73.6 3.2 0.00011 39.4 4.8 93 65-159 152-246 (328)
498 2g0t_A Conserved hypothetical 73.5 1.8 6.3E-05 42.6 3.1 102 64-169 23-135 (350)
499 1h5q_A NADP-dependent mannitol 73.4 4 0.00014 36.9 5.3 31 64-95 15-45 (265)
500 1nvt_A Shikimate 5'-dehydrogen 73.2 2 7E-05 40.4 3.3 90 64-159 129-230 (287)
No 1
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=4.2e-95 Score=725.47 Aligned_cols=340 Identities=44% Similarity=0.786 Sum_probs=320.4
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccC-CCCCEEEEcCCC
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADF-SNVDAVFCCLPH 139 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~-~~vDvVF~al~~ 139 (406)
+.|+||||+|||||+|++|+|+|++||++|++.++|++++|+++.++||+|. .++. +++.+++++ .++|+||+|+|+
T Consensus 11 ~~~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~-~~l~-~~~~~~~~~~~~~Dvvf~alp~ 88 (351)
T 1vkn_A 11 HHMIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTL-ENSI-LSEFDPEKVSKNCDVLFTALPA 88 (351)
T ss_dssp -CCEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGC-CCCB-CBCCCHHHHHHHCSEEEECCST
T ss_pred cceeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhc-cCce-EEeCCHHHhhcCCCEEEECCCc
Confidence 4589999999999999999999999999999999999999999999999986 4543 444555555 689999999999
Q ss_pred cchHHHHhhCCCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchhhccCCcEEecCCChHHHHHHHH
Q 015441 140 GTTQEIIKGLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPL 219 (406)
Q Consensus 140 ~~s~~~~~~l~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~~i~~~~iVanPgC~tta~~l~L 219 (406)
++|+++++.+ +|++|||+|+||||++.+.|++||+.+|.+|+++++ +||+||+||++|+++++|||||||||+++|+|
T Consensus 89 ~~s~~~~~~~-~g~~VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~-~yglPE~n~e~i~~a~iIANPgC~~t~~~laL 166 (351)
T 1vkn_A 89 GASYDLVREL-KGVKIIDLGADFRFDDPGVYREWYGKELSGYENIKR-VYGLPELHREEIKNAQVVGNPGCYPTSVILAL 166 (351)
T ss_dssp THHHHHHTTC-CSCEEEESSSTTTCSSHHHHHHHHCCCCTTGGGCCE-EECCHHHHHHHHTTCSEEECCCHHHHHHHHHH
T ss_pred HHHHHHHHHh-CCCEEEECChhhhCCchhhhhhhcCCCCCchhhcCC-ceECCccCHHHhccCCEEeCCChHHHHHHHHH
Confidence 9999999999 999999999999999889999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHccCCCcceEEEEEeeccCccCcchhhcccHHHHhcCcccccCCcccchhhhhhhhccccCCCceEEEEEEEeeec
Q 015441 220 VPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLYSEIAEGIYSYGVTRHRHVPEIEQGLTGFASSKVTVSFTPHLMPMI 299 (406)
Q Consensus 220 ~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~~e~~~ni~py~~~~h~h~pEi~~~l~~i~~~~~~v~~t~~rVPv~ 299 (406)
+||+++++++.++|+|+|+||+||||+++++++|+.++.+|++||+++.|||+|||++++++++++.++|+||||||||+
T Consensus 167 ~PL~~~~~i~~~~iiv~t~sgvSGAG~~~~~~~~~~e~~~n~~~y~~~~h~h~pEi~~el~~i~~~~~~v~ftp~rvPv~ 246 (351)
T 1vkn_A 167 APALKHNLVDPETILVDAKSGVSGAGRKEKVDYLFSEVNESLRPYNVAKHRHVPEMEQELGKISGKKVNVVFTPHLVPMT 246 (351)
T ss_dssp HHHHHTTCSCCSEEEEEEEEEGGGGCSCCSGGGBHHHHTTCCEECSCSCCTHHHHHHHHHHHHHTSCCEEEEEEEEESSS
T ss_pred HHHHHcCCCCCCEEEEEEEeeccccCcccccccchhHHhcccccCCccccccHHHHHHHHHHhhCCCCCEEEEEEEeccc
Confidence 99999987766699999999999999999999899999999999999999999999999999988888999999999999
Q ss_pred ceeEEEEEEEeCCCCCHHHHHHHHHHHcCCCCcEEecCCCCccccccccCCCcEEEEEEEeCcCCeEEEEEEehhhhHhH
Q 015441 300 RGMQSTIYVEMAPGVTIEDLYQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGA 379 (406)
Q Consensus 300 rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~~fV~v~~~~~~P~~~~v~g~n~~~v~~~~~~~~~~~~~~~v~DNL~KGA 379 (406)
|||++|+|++++ ++.+|++++|+++|+++|||+|.+++.+|+|++++|+|+|+||+..+..++++++|+++|||+|||
T Consensus 247 rG~~~tv~v~l~--~~~eei~~~l~~~Y~~~pfV~v~~~~~~P~~~~v~gtn~~~Ig~~~d~~~~~l~~~s~~DNL~KGA 324 (351)
T 1vkn_A 247 RGILSTIYVKTD--KSLEEIHEAYLEFYKNEPFVHVLPMGIYPSTKWCYGSNHVFIGMQMEERTNTLILMSAIDNLVKGA 324 (351)
T ss_dssp SCEEEEEEEECS--SCHHHHHHHHHHHHTTCTTEEECCTTCCCCGGGGTTSSCEEEEEEEETTTTEEEEEEEECTTTTTT
T ss_pred cEEEEEEEEEEc--CCHHHHHHHHHHhhCCCCCEEEeCCCCCcChHHhcCCceEEEEEEEcCCCCEEEEEEEcccHHHhH
Confidence 999999999998 899999999999999999999999888999999999999999976666678999999999999999
Q ss_pred HHHHHHHHHHHhCCCcccCCCCCCCCC
Q 015441 380 SGQALQNLNIMLGFPENTGLLYQPLFP 406 (406)
Q Consensus 380 AgqAVQ~~nl~~g~~e~~gl~~~~~~p 406 (406)
|||||||||+|+|||||+||.+.|+||
T Consensus 325 AgqAVQn~nlm~G~~E~~GL~~~~~~p 351 (351)
T 1vkn_A 325 SGQAVQNMNIMFGLDETKGLEFTPIYP 351 (351)
T ss_dssp HHHHHHHHHHHTTCCTTTTCCCCCCCC
T ss_pred HHHHHHHHHHHhCCCcccCCCcCCCCC
Confidence 999999999999999999999999998
No 2
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=100.00 E-value=5.9e-90 Score=686.33 Aligned_cols=326 Identities=39% Similarity=0.672 Sum_probs=305.9
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccC---cCCccccccccCcccc-CCCccccc-CcccC-CCCCEEEEc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADR---KAGQSIGSVFPHLISQ-DLPTMVAV-KDADF-SNVDAVFCC 136 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~---~~G~~i~~v~p~l~~~-~~~~~~~~-~~~~~-~~vDvVF~a 136 (406)
|+||+|+|||||+|++|+++|.+||+++++.+.+++ ++|+++.++||+|.+. ++. ++++ +.+++ .++|+||+|
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~-v~~~~~~~~~~~~~Dvvf~a 82 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELP-LQPMSDISEFSPGVDVVFLA 82 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCB-EEEESSGGGTCTTCSEEEEC
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCcccee-EeccCCHHHHhcCCCEEEEC
Confidence 589999999999999999999999999999999888 9999999999998764 443 4444 55567 799999999
Q ss_pred CCCcchHHHHhhC-CCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchhhccCCcEEecCCChHHHH
Q 015441 137 LPHGTTQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSI 215 (406)
Q Consensus 137 l~~~~s~~~~~~l-~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~~i~~~~iVanPgC~tta~ 215 (406)
+|++.++++++.+ ++|++|||+|++|||++.+.|++||+.+|..|+++.+++||+||+|+++|+++++|||||||||++
T Consensus 83 ~p~~~s~~~~~~~~~~g~~vIDlSa~fR~~d~~v~~~wy~~~~~~p~l~~~~vyglPEvn~~~i~~~~iIanPgC~tt~~ 162 (337)
T 3dr3_A 83 TAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAA 162 (337)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEECSSTTSSSCHHHHHHHTSSCCSCHHHHHHCEECCTTTCCHHHHTCSEEECCCHHHHHH
T ss_pred CChHHHHHHHHHHHHCCCEEEEcCCccccCCcccchhhccccccChhhhcceEEEccccCHHHhCCCCEEecCChHHHHH
Confidence 9999999999875 889999999999999988999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCcceE-EEEEeeccCccCcchhhcccHHHHhcCcccccCCcccchhhhhhhhccccCCCceEEEEEE
Q 015441 216 QLPLVPLIQANLIQYRNI-IIDAKSGVSGAGRGAKEANLYSEIAEGIYSYGVTRHRHVPEIEQGLTGFASSKVTVSFTPH 294 (406)
Q Consensus 216 ~l~L~PL~~~~l~~i~~i-~v~t~~gvSGaG~~~~~~~~~~e~~~ni~py~~~~h~h~pEi~~~l~~i~~~~~~v~~t~~ 294 (406)
+++|+||+++++++++++ +|+|+||+||+||++++..|+.++ |++||+++.|||+|||++.+++ +|+||||
T Consensus 163 ~l~L~PL~~~g~~~~~~i~~v~t~~g~SGaG~~~~~~~~~~~~--n~~py~~~~h~h~Pei~~~l~~------~v~ft~~ 234 (337)
T 3dr3_A 163 QLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNSFCEV--SLQPYGVFTHRHQPEIATHLGA------DVIFTPH 234 (337)
T ss_dssp HHHHHHHHHTTCBCTTSCCEEEEEECGGGGCSCCCSTTSGGGC--SEEECSTTTCTHHHHHHHHHTS------CCEEEEE
T ss_pred HHHHHHHHHcCccCCCceEEEEEeeccccCCcccccccccccc--ceEccCcccceechhHHhhhcC------CEEEEEE
Confidence 999999999888999999 999999999999999997788776 9999999999999999998754 6999999
Q ss_pred EeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCCCcEEecCCCCccccccccCCCcEEEEEEEeCcCCeEEEEEEehh
Q 015441 295 LMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDN 374 (406)
Q Consensus 295 rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~~fV~v~~~~~~P~~~~v~g~n~~~v~~~~~~~~~~~~~~~v~DN 374 (406)
||||+|||++++|++++++++.+|++++|+++|+++|||++.+++. |+|+++.|+|+|+||+.++ ++++++|+++||
T Consensus 235 rvPv~rG~~~ti~~~l~~~~t~eev~~~l~~~Y~~~p~V~v~~~~~-P~~~~v~gtn~~~ig~~~~--~~~l~~~~~~DN 311 (337)
T 3dr3_A 235 LGNFPRGILETITCRLKSGVTQAQVAQALQQAYAHKPLVRLYDKGV-PALKNVVGLPFCDIGFAVQ--GEHLIIVATEDN 311 (337)
T ss_dssp EESSSSCEEEEEEEEBCTTCCHHHHHHHHHHHHTTCTTEEECSSSC-CCGGGTTTSSCEEEEEEEE--TTEEEEEEEECT
T ss_pred EecccccEEEEEEEEECCCCCHHHHHHHHHHHhCCCCCEEECCCCC-CCHHHhCCCCcEEEEEEEe--CCEEEEEEEech
Confidence 9999999999999999999999999999999999999999998776 9999999999999999988 789999999999
Q ss_pred hhHhHHHHHHHHHHHHhCCCcccCCC
Q 015441 375 LVKGASGQALQNLNIMLGFPENTGLL 400 (406)
Q Consensus 375 L~KGAAgqAVQ~~nl~~g~~e~~gl~ 400 (406)
|+||||||||||||+|+|||||+||.
T Consensus 312 L~KGAAgqAVQ~~nlm~g~~e~~gl~ 337 (337)
T 3dr3_A 312 LLKGAAAQAVQCANIRFGYAETQSLI 337 (337)
T ss_dssp TTTTTHHHHHHHHHHHHTCCTTTTTC
T ss_pred HHHHHHHHHHHHHHHHhCCchhhcCC
Confidence 99999999999999999999999983
No 3
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=100.00 E-value=6.3e-88 Score=678.05 Aligned_cols=341 Identities=85% Similarity=1.288 Sum_probs=316.9
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCcccc---CCCcccccCcccCCCCCEEEEcCCC
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQ---DLPTMVAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~---~~~~~~~~~~~~~~~vDvVF~al~~ 139 (406)
++||+|+||||++|++++|+|.+||+++++++++++++|++++++||+|.+. ++. +.+ ++.|.++|+||+|+|+
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~-~~~--~~~~~~vDvVf~atp~ 92 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLV-SVK--DADFSTVDAVFCCLPH 92 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCB-CGG--GCCGGGCSEEEECCCT
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccce-ecc--hhHhcCCCEEEEcCCc
Confidence 3799999999999999999999999999999999999999999999988752 332 222 3356789999999999
Q ss_pred cchHHHHhhCCCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchhhccCCcEEecCCChHHHHHHHH
Q 015441 140 GTTQEIIKGLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPL 219 (406)
Q Consensus 140 ~~s~~~~~~l~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~~i~~~~iVanPgC~tta~~l~L 219 (406)
+.++++++.+++|++|||+|++||+++.+.|++||+.+|..||++++++||+||+|+++++++++|||||||||+++++|
T Consensus 93 ~~s~~~a~~~~aG~~VId~sa~~R~~~~~~y~~~y~~~~~~~~~l~~~vygvpE~n~~~i~~~~iIanpgC~tt~~~~~l 172 (359)
T 1xyg_A 93 GTTQEIIKELPTALKIVDLSADFRLRNIAEYEEWYGQPHKAVELQKEVVYGLTEILREDIKKARLVANPGCYPTTIQLPL 172 (359)
T ss_dssp TTHHHHHHTSCTTCEEEECSSTTTCSCHHHHHHHHSSCCSCHHHHTTCEECCHHHHHHHHHTCSEEECCCHHHHHHHHHH
T ss_pred hhHHHHHHHHhCCCEEEECCccccCCchhhhhhhhcCCcCChhhcCCceEECCccCHHHhccCCEEECCCcHHHHHHHHH
Confidence 99999998666699999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHccCCCcceEEEEEeeccCccCcchhhcccHHHHhcCcccccCCcccchhhhhhhhccccCCCceEEEEEEEeeec
Q 015441 220 VPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLYSEIAEGIYSYGVTRHRHVPEIEQGLTGFASSKVTVSFTPHLMPMI 299 (406)
Q Consensus 220 ~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~~e~~~ni~py~~~~h~h~pEi~~~l~~i~~~~~~v~~t~~rVPv~ 299 (406)
+||+++++++.++++|+|+||+||+|+++.+++|+.++.+|++||+++.|+|+|||++.+++++++.++|+|||+|||++
T Consensus 173 ~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~~~~~~~ni~py~~~~h~h~pEi~~~l~~~~~~~~~v~~t~~rvP~~ 252 (359)
T 1xyg_A 173 VPLLKANLIKHENIIIDAKSGVSGAGRGAKEANLYSEIAEGISSYGVTRHRHVPEIEQGLSDVAQSKVTVSFTPHLMPMI 252 (359)
T ss_dssp HHHHHTTCBCSSSCEEEEEEEGGGGCSCCCGGGBHHHHTTCCEECSCSCCTHHHHHHHHHHHHHTSCCCCEEECEEESSS
T ss_pred HHHHHcCCCCCCeEEEEEEEEccccCcccchhhhhHHHhcCeecccccccccHHHHHHHHHHhcCCCCCEEEEEEEeccc
Confidence 99999965544499999999999999999998889999999999999999999999999998888788999999999999
Q ss_pred ceeEEEEEEEeCCCCCHHHHHHHHHHHcCCCCcEEecCCCCccccccccCCCcEEEEEEEeCcCCeEEEEEEehhhhHhH
Q 015441 300 RGMQSTIYVEMAPGVTIEDLYQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGA 379 (406)
Q Consensus 300 rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~~fV~v~~~~~~P~~~~v~g~n~~~v~~~~~~~~~~~~~~~v~DNL~KGA 379 (406)
|||++++|++++++++.|||+++|+++|+++|||++.+++.+|+|++++|+|+|+||+..+..++++++|+++|||+|||
T Consensus 253 ~G~~~~i~~~l~~~~t~eei~~~~~~~y~~~~~V~v~~~~~~p~~~~v~g~n~~~ig~~~d~~~~~l~~~~~~DNl~kGA 332 (359)
T 1xyg_A 253 RGMQSTIYVEMAPGVRTEDLHQQLKTSYEDEEFVKVLDEGVVPRTHNVRGSNYCHMSVFPDRIPGRAIIISVIDNLVKGA 332 (359)
T ss_dssp SCEEEEEEEEBCTTCCHHHHHHHHHHHHTTCSSEEECCTTCCCBGGGTTTSSCEEEEEEECSSTTEEEEEEEECTTTTTT
T ss_pred ceEEEEEEEEeCCCCCHHHHHHHHHHhhCCCCCEEEcCCCCCCCHHHhcCCCeEEEEEEEeCCCCEEEEEEEehhhhHhH
Confidence 99999999999999999999999999999999999999888999999999999999965565668999999999999999
Q ss_pred HHHHHHHHHHHhCCCcccCCCCCCCCC
Q 015441 380 SGQALQNLNIMLGFPENTGLLYQPLFP 406 (406)
Q Consensus 380 AgqAVQ~~nl~~g~~e~~gl~~~~~~p 406 (406)
|||||||||+|+||+||+||.+.|+||
T Consensus 333 Ag~Avq~~nl~~g~~e~~gl~~~~~~p 359 (359)
T 1xyg_A 333 SGQALQNLNIMLGYPETTGLLHQPLFP 359 (359)
T ss_dssp HHHHHHHHHHHTTSCTTTTCCCCCCCC
T ss_pred HHHHHHHHHHHhCCCcccCCCcCCCCC
Confidence 999999999999999999999999998
No 4
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=100.00 E-value=3.8e-87 Score=670.19 Aligned_cols=334 Identities=38% Similarity=0.643 Sum_probs=311.1
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCC-----CceEEEEeccCcCCccccccccCccc-cCCCcccccCcccCCCCCEEEEc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHP-----YFGIKLMTADRKAGQSIGSVFPHLIS-QDLPTMVAVKDADFSNVDAVFCC 136 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp-----~~elv~l~s~~~~G~~i~~v~p~l~~-~~~~~~~~~~~~~~~~vDvVF~a 136 (406)
|+||+|+||||++|++|+|+|.+|| ++|++++++++++|+++.++||+|.+ .++. +.+.++++|.++|+||+|
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~-~~~~~~~~~~~~DvVf~a 87 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRV-VEPTEAAVLGGHDAVFLA 87 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCB-CEECCHHHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceee-eccCCHHHhcCCCEEEEC
Confidence 5799999999999999999999999 99999999999999999999999875 3443 344444557799999999
Q ss_pred CCCcchHHHHhhCCCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhcccccc--chhhccCCcEEecCCChHHH
Q 015441 137 LPHGTTQEIIKGLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEI--SREDIKNARLVANPGCYPTS 214 (406)
Q Consensus 137 l~~~~s~~~~~~l~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~--~~~~i~~~~iVanPgC~tta 214 (406)
+|++.++++++.+++|++|||+|++||+++++.|++||+.+|..| ++||+||+ |+++|+++++|||||||||+
T Consensus 88 lg~~~s~~~~~~~~~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~-----~vyglPEv~~n~~~i~~~~iIanPgC~tt~ 162 (352)
T 2nqt_A 88 LPHGHSAVLAQQLSPETLIIDCGADFRLTDAAVWERFYGSSHAGS-----WPYGLPELPGARDQLRGTRRIAVPGCYPTA 162 (352)
T ss_dssp CTTSCCHHHHHHSCTTSEEEECSSTTTCSCHHHHHHHHSSCCCCC-----CCBSCTTSTTHHHHHTTCSEEECCCHHHHH
T ss_pred CCCcchHHHHHHHhCCCEEEEECCCccCCcchhhhhhccccCCCC-----eeEEecccccCHHHHhcCCEEEcCCHHHHH
Confidence 999999999987766999999999999998899999999999988 78999999 99999999999999999999
Q ss_pred HHHHHHHHHHccCCCcc-eEEEEEeeccCccCcchhhcccHHHHhcCcccccCCc-ccchhhhhhhhccccCCCceEEEE
Q 015441 215 IQLPLVPLIQANLIQYR-NIIIDAKSGVSGAGRGAKEANLYSEIAEGIYSYGVTR-HRHVPEIEQGLTGFASSKVTVSFT 292 (406)
Q Consensus 215 ~~l~L~PL~~~~l~~i~-~i~v~t~~gvSGaG~~~~~~~~~~e~~~ni~py~~~~-h~h~pEi~~~l~~i~~~~~~v~~t 292 (406)
++++|+||+++++ ++ +++|+|+||+||+|+++++..|+.++.+++.+|++.. |||+|||+++++++++..++|+||
T Consensus 163 ~~lal~PL~~~~~--i~~~i~v~t~~g~SGaG~~~~~~~~~~~~~~~~~ay~~~~~h~h~pEi~~e~~ki~~~~~~v~ft 240 (352)
T 2nqt_A 163 ALLALFPALAADL--IEPAVTVVAVSGTSGAGRAATTDLLGAEVIGSARAYNIAGVHRHTPEIAQGLRAVTDRDVSVSFT 240 (352)
T ss_dssp HHHHHHHHHHTTC--SCSEEEEEEEECGGGGCSSCCGGGSHHHHTTCCEECSTTTTSTTHHHHHHHHHTTCSSCCEEEEE
T ss_pred HHHHHHHHHHcCC--CcceEEEEEEeccccCCccccccccHHHHhhhcccccCCCcceecHHHHHHHHHHhCCCCCEEEE
Confidence 9999999999864 55 6999999999999999999889999999999999988 999999999999999888999999
Q ss_pred EEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCCCcEEecCCCCccccccccCCCcEEEEEEEeCcCCeEEEEEEe
Q 015441 293 PHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVI 372 (406)
Q Consensus 293 ~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~~fV~v~~~~~~P~~~~v~g~n~~~v~~~~~~~~~~~~~~~v~ 372 (406)
||||||+|||++++|++++++ .+|++++|+++|+++|||+|.+++.+|+|+++.|+|+|+||+..+..++++++|+++
T Consensus 241 ~~rvP~~rG~~~ti~~~l~~~--~~ei~~~~~~~y~~~~~V~v~~~~~~p~~~~v~g~n~~~ig~~~d~~~~~l~~~~~~ 318 (352)
T 2nqt_A 241 PVLIPASRGILATCTARTRSP--LSQLRAAYEKAYHAEPFIYLMPEGQLPRTGAVIGSNAAHIAVAVDEDAQTFVAIAAI 318 (352)
T ss_dssp EEECSCSSCEEEEEEEECCSC--HHHHHHHHHHHHTTCTTEEECCTTCCCCGGGTTTSSCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEccccEEEEEEEEEECCC--HHHHHHHHHHhhCCCCCEEEeCCCCCcChHHhcCCcEEEEEEEEeCCCCEEEEEEEE
Confidence 999999999999999999877 899999999999999999999988899999999999999997667677899999999
Q ss_pred hhhhHhHHHHHHHHHHHHhCCCcccCCCCCCCCC
Q 015441 373 DNLVKGASGQALQNLNIMLGFPENTGLLYQPLFP 406 (406)
Q Consensus 373 DNL~KGAAgqAVQ~~nl~~g~~e~~gl~~~~~~p 406 (406)
|||+||||||||||||+|+|||||+||.+.|+||
T Consensus 319 DNL~KGAAg~AVQ~~nl~~g~~e~~gl~~~~~~p 352 (352)
T 2nqt_A 319 DNLVKGTAGAAVQSMNLALGWPETDGLSVVGVAP 352 (352)
T ss_dssp CTTTTTTHHHHHHHHHHHHTCCTTTTCCCCCCCC
T ss_pred cchhHhHHHHHHHHHHHHhCCCcccCCCcCCCCC
Confidence 9999999999999999999999999999999998
No 5
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=100.00 E-value=4.1e-86 Score=661.76 Aligned_cols=336 Identities=34% Similarity=0.556 Sum_probs=309.8
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccc-cCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLIS-QDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~-~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
|+||+|+||||++|++++|+|.+||++|++++++++++|+++.++|++|.+ .++. +.+.+ +|.++|+||+|+|++.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~-~~~~~--~~~~vDvV~~a~g~~~ 80 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLK-FVPPE--KLEPADILVLALPHGV 80 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCB-CBCGG--GCCCCSEEEECCCTTH
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCccccc-ccchh--HhcCCCEEEEcCCcHH
Confidence 589999999999999999999999999999999988999999999998866 3433 33332 4678999999999999
Q ss_pred hHHHHhhC-CCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchhhccCCcEEecCCChHHHHHHHHH
Q 015441 142 TQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLV 220 (406)
Q Consensus 142 s~~~~~~l-~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~~i~~~~iVanPgC~tta~~l~L~ 220 (406)
++++++++ ++|++|||+|++||+++.+.|++||+ +|..||++++++||+||+|+++++++++|||||||||+++++|+
T Consensus 81 s~~~a~~~~~aG~~VId~Sa~~r~~~~~~y~~~y~-~h~~~e~l~~~vygvpE~n~~~i~~~~iIanp~C~tt~~~~~l~ 159 (345)
T 2ozp_A 81 FAREFDRYSALAPVLVDLSADFRLKDPELYRRYYG-EHPRPDLLGRFVYAVPELYREALKGADWIAGAGCNATATLLGLY 159 (345)
T ss_dssp HHHTHHHHHTTCSEEEECSSTTSCSCHHHHHHHHC-CCSSGGGTTSSEECCHHHHHHHHHTCSEEECCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEcCccccCCChHHHHhhhc-cccchhhhccCcEeccccCHHHhhcCCEEeCCCcHHHHHHHHHH
Confidence 99999865 88999999999999998899999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHccCCCcceEEEEEeeccCccCcchhhcccHHHHhcCcccccCCcccchhhhhhhhccccCCCceEEEEEEEeeecc
Q 015441 221 PLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLYSEIAEGIYSYGVTRHRHVPEIEQGLTGFASSKVTVSFTPHLMPMIR 300 (406)
Q Consensus 221 PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~~e~~~ni~py~~~~h~h~pEi~~~l~~i~~~~~~v~~t~~rVPv~r 300 (406)
||+++++++.++++|+|+||+||+|+++++++|+.++.+|++||+++.|+|+|||++.++ +.+ +|+|||||||++|
T Consensus 160 pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~~~~~~~n~~py~~~~h~~~pei~~~l~---~~~-~v~~~~~rvP~~~ 235 (345)
T 2ozp_A 160 PLLKAGVLKPTPIFVTLLISTSAGGAEASPASHHPERAGSIRVYKPTGHRHTAEVVENLP---GRP-EVHLTAIATDRVR 235 (345)
T ss_dssp HHHHTTCBCSSCEEEEEEECSGGGCSSCCGGGCHHHHTTCCEEEECSCCTHHHHHHHTSS---SCC-CEEEEEEECSCSS
T ss_pred HHHHhcCCCCCeEEEEEEEEccccCccccccccchhhccccccCCCCCccChHhHHHHhC---CCC-CeEEEEEEecccc
Confidence 999996555459999999999999999999888899999999999999999999998876 233 7999999999999
Q ss_pred eeEEEEEEEeCCCCCHHHHHHHHHHHcCCCCcEEec----CCCCccccccccCCCcEEEEEEEeCcCCeEEEEEEehhhh
Q 015441 301 GMQSTIYVEMAPGVTIEDLYQQLKISYEHEEFVKLL----EKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLV 376 (406)
Q Consensus 301 G~~~ti~v~l~~~~s~eev~~~l~~~y~~~~fV~v~----~~~~~P~~~~v~g~n~~~v~~~~~~~~~~~~~~~v~DNL~ 376 (406)
||++++|++++++++.|||+++|+++|+++|||+|. +++.+|+|++++|+|+|+||+..+..++++++|+++|||+
T Consensus 236 g~~~~i~~~l~~~~t~eei~~~~~~~y~~~~~v~v~~~~~~~~~~p~~~~~~g~~~~~ig~~~d~~~~~~~~~~~~DNl~ 315 (345)
T 2ozp_A 236 GILMTAQCFVQDGWSERDVWQAYREAYAGEPFIRLVKQKKGVHRYPDPRFVQGTNYADIGFELEEDTGRLVVMTAIDNLV 315 (345)
T ss_dssp CEEEEEEEEBCTTCCHHHHHHHHHHHHTTCTTEEECCCSSSSCCSCCHHHHTTSCCEEEEEEEETTTTEEEEEEEECTTT
T ss_pred EEEEEEEEEeCCCCCHHHHHHHHHHHhCCCCCEEEEeCCCCcCCCCCHHHhcCCceEEEEEEEeCCCCEEEEEEEeccHH
Confidence 999999999999999999999999999999999998 4556999999999999999965666678999999999999
Q ss_pred HhHHHHHHHHHHHHhCCCcccCCCCCCCCC
Q 015441 377 KGASGQALQNLNIMLGFPENTGLLYQPLFP 406 (406)
Q Consensus 377 KGAAgqAVQ~~nl~~g~~e~~gl~~~~~~p 406 (406)
||||||||||||+|+|||||+||.+.|+||
T Consensus 316 kGAAg~Avq~~nl~~g~~e~~gl~~~~~~p 345 (345)
T 2ozp_A 316 KGTAGHALQALNVRMGWPETLGLDFPGLHP 345 (345)
T ss_dssp TTTHHHHHHHHHHHTTCCTTTTCCCCCCCC
T ss_pred HHHHHHHHHHHHHHhCcchhcCCCcCCCCC
Confidence 999999999999999999999999999998
No 6
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=100.00 E-value=3.2e-74 Score=581.14 Aligned_cols=322 Identities=21% Similarity=0.310 Sum_probs=274.2
Q ss_pred cccccCC-ccEEEEECcccHHHHHHHHHHHcCCCceEEEEe-ccCcCCccccccccCccc-------cCCCcccccCcc-
Q 015441 56 KTQKSEK-QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT-ADRKAGQSIGSVFPHLIS-------QDLPTMVAVKDA- 125 (406)
Q Consensus 56 ~~~~~~~-~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~-s~~~~G~~i~~v~p~l~~-------~~~~~~~~~~~~- 125 (406)
..|.++| |+||||+|||||+|++|+|+|++||++|+..+. |++++|+++.+++|++.+ .++ .+++.+++
T Consensus 11 ~~~~~~M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~-~v~~~~~~~ 89 (381)
T 3hsk_A 11 VPRGSHMSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDI-VVQECKPEG 89 (381)
T ss_dssp -------CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTC-BCEESSSCT
T ss_pred ccccccCCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccc-eEEeCchhh
Confidence 3444444 479999999999999999999999999998875 788999999999988753 233 24445555
Q ss_pred cCCCCCEEEEcCCCcchHHHHhhC-CCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchhh------
Q 015441 126 DFSNVDAVFCCLPHGTTQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISRED------ 198 (406)
Q Consensus 126 ~~~~vDvVF~al~~~~s~~~~~~l-~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~~------ 198 (406)
++.++|+||+|+|+++++++++.+ ++|++|||+|++|||++ ++|+.+|++|.+ .||+||++|++
T Consensus 90 ~~~~~Dvvf~alp~~~s~~~~~~~~~~G~~VIDlSa~fR~~~--------~vplvv~~vn~~-~~~l~E~~r~~~~~~~~ 160 (381)
T 3hsk_A 90 NFLECDVVFSGLDADVAGDIEKSFVEAGLAVVSNAKNYRREK--------DVPLVVPIVNPE-HIDVVENKVKQAVSKGG 160 (381)
T ss_dssp TGGGCSEEEECCCHHHHHHHHHHHHHTTCEEEECCSTTTTCT--------TSCEECTTTCGG-GGHHHHHHHHHHHHTTC
T ss_pred hcccCCEEEECCChhHHHHHHHHHHhCCCEEEEcCCcccCCC--------CCcEEecccCHH-HcCCHhhhhhhhccccc
Confidence 678999999999999999999876 78999999999999986 467778888876 47999999987
Q ss_pred ccCCcEEecCCChHHHHHHHHHHHHHc-cCCCcceEEEEEeeccCccCcc-hhhcccHHHHhcCcccccCCc-ccchhhh
Q 015441 199 IKNARLVANPGCYPTSIQLPLVPLIQA-NLIQYRNIIIDAKSGVSGAGRG-AKEANLYSEIAEGIYSYGVTR-HRHVPEI 275 (406)
Q Consensus 199 i~~~~iVanPgC~tta~~l~L~PL~~~-~l~~i~~i~v~t~~gvSGaG~~-~~~~~~~~e~~~ni~py~~~~-h~h~pEi 275 (406)
++++++|||||||||+++++|+||+++ |+ +++++|+|+||+||||++ +.+. .++++|++||+.+. |+|+||+
T Consensus 161 i~~~~iIaNPgC~tt~~~laL~PL~~~~gl--I~~v~v~t~~gvSGAG~~~~~~~---~~~~~N~~Py~~~~e~k~~~Ei 235 (381)
T 3hsk_A 161 KKPGFIICISNCSTAGLVAPLKPLVEKFGP--IDALTTTTLQAISGAGFSPGVSG---MDILDNIVPYISGEEDKLEWET 235 (381)
T ss_dssp CCCCEEEEECCHHHHHHHHHHHHHHHHHCC--EEEEEEEEEBCCCC------CCH---HHHTTCCBCCCTTHHHHHHHHH
T ss_pred ccCCcEEECCCcHHHHHHHHHHHHHHhcCC--ceEEEEEEeeccCCCCccCCcch---hhhhcChhhcccchHHHHHHHH
Confidence 577889999999999999999999997 43 579999999999999994 4443 38999999999887 8999999
Q ss_pred hhhhccccC----------CCceEEEEEEEeeecceeEEEEEEEeCC--CCCHHHHHHHHHHHcCC----------CCcE
Q 015441 276 EQGLTGFAS----------SKVTVSFTPHLMPMIRGMQSTIYVEMAP--GVTIEDLYQQLKISYEH----------EEFV 333 (406)
Q Consensus 276 ~~~l~~i~~----------~~~~v~~t~~rVPv~rG~~~ti~v~l~~--~~s~eev~~~l~~~y~~----------~~fV 333 (406)
++.|..+.+ +.++|+|||+||||+|||++++|+++++ +++.||++++|+++|++ ++||
T Consensus 236 ~kiL~~l~~~~~~~~~~~~~~~~v~ft~~rVPv~rG~~~tv~v~l~~~~~~t~eei~~~l~~~y~~~~~~~l~~~p~~~V 315 (381)
T 3hsk_A 236 KKILGGVNAEGTEFVPIPESEMKVSAQCNRVPVIDGHTECISLRFANRPAPSVEDVKQCLREYECAASKLGCHSAPKQTI 315 (381)
T ss_dssp HHHTCEECTTSSSEECCCTTTCEEEEECCBCSCSSCCEEEEEEEESSSSCCCHHHHHHHHHHCBCHHHHTTCTTCCSBSE
T ss_pred HHHhhhcccccccccccccCCCceEEEEEEeceeccEEEEEEEEeCCCCCCCHHHHHHHHHHhhccccccccccCCCCcE
Confidence 998876543 4579999999999999999999999998 89999999999999987 8999
Q ss_pred EecCCCCccccc---cccCCCcEEEEEEEeCcCCeEEEEEEehhhhHhHHHHHHHHHHHHhC
Q 015441 334 KLLEKGVVPRTH---NVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLG 392 (406)
Q Consensus 334 ~v~~~~~~P~~~---~v~g~n~~~v~~~~~~~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~~g 392 (406)
+|.+++++|+|+ ++.|++.|+|||+|.+....+.+|+++|||+||||||||||||+|+.
T Consensus 316 ~v~~~~~~P~p~~~~~~~~~~~v~Vgrir~d~~~~~~~~~v~DNl~kGAAg~AVq~aell~~ 377 (381)
T 3hsk_A 316 HVLDQPDRPQPRLDRDRDSGYGVSVGRIREDSLLDFKMVVLSHNTIIGAAGAGILIAEILKA 377 (381)
T ss_dssp EEECSTTCCCHHHHTTTTTTSSEEEEEEEECSSSSEEEEEEECHHHHSHHHHHHHHHHHHHT
T ss_pred EEeCCCCCCceeecccccCCceEEEEEEEeCCCCCeEEEEEeCcHHHhHHHHHHHHHHHHHH
Confidence 999988899999 67899999999998765557999999999999999999999999974
No 7
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=100.00 E-value=5.4e-74 Score=576.29 Aligned_cols=308 Identities=20% Similarity=0.352 Sum_probs=269.7
Q ss_pred cCCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccc-------cCCCcccccCcccCCCCCE
Q 015441 60 SEKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLIS-------QDLPTMVAVKDADFSNVDA 132 (406)
Q Consensus 60 ~~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~-------~~~~~~~~~~~~~~~~vDv 132 (406)
+.+++||||+|||||+|++|+|+|++||++|++.++|++++|+++.+++||... .++. +++.+++++.++|+
T Consensus 4 M~~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~-v~~~~~~~~~~vDv 82 (359)
T 4dpl_A 4 MRRTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADME-IKPTDPKLMDDVDI 82 (359)
T ss_dssp --CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCB-CEECCGGGCTTCCE
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccce-EEeCCHHHhcCCCE
Confidence 345689999999999999999999999999999999999999999998886321 2332 34455566789999
Q ss_pred EEEcCCCcchHHHHhhC-CCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchhhcc---C-------
Q 015441 133 VFCCLPHGTTQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIK---N------- 201 (406)
Q Consensus 133 VF~al~~~~s~~~~~~l-~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~~i~---~------- 201 (406)
||+|+|++.++++++.+ ++|++|||+|++||+++ ++| ||+||+|++++. +
T Consensus 83 vf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~--------~~p-----------~~vpEvN~~~i~~i~~~~~~~~~ 143 (359)
T 4dpl_A 83 IFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDP--------DVP-----------LLVPELNPHTISLIDEQRKRREW 143 (359)
T ss_dssp EEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCT--------TSC-----------BCCTTTCGGGGGHHHHHHHHHTC
T ss_pred EEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCC--------Ccc-----------EEEcCCCHHHHhhHhhccccccc
Confidence 99999999999999875 88999999999999976 233 677777777753 2
Q ss_pred -CcEEecCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhcccHHHHhcCcccccCCc-ccchhhhhhhh
Q 015441 202 -ARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLYSEIAEGIYSYGVTR-HRHVPEIEQGL 279 (406)
Q Consensus 202 -~~iVanPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~~e~~~ni~py~~~~-h~h~pEi~~~l 279 (406)
+++|||||||||+++++|+||+++ +++++++|+|+||+||||+.+. ++.++++|++||..+. |+|+||+++.|
T Consensus 144 ~~~iIanPgC~tt~~~l~L~PL~~~--~gi~~v~v~t~~g~SGaG~~~~---~~~~~~~N~ipy~~~~e~k~~~Ei~kil 218 (359)
T 4dpl_A 144 KGFIVTTPLCTAQGAAIPLGAIFKD--YKMDGAFITTIQSLSGAGYPGI---PSLDVVDNILPLGDGYDAKTIKEIFRIL 218 (359)
T ss_dssp SSEEEECCCHHHHHHHHHHHHHHHH--SCEEEEEEEEEBCGGGGCSSCS---BHHHHTTCCEECCHHHHHHHHHHHHHHH
T ss_pred CccEEECCCcHHHHHHHHHHHHHHh--cCCcEEEEEEEeccccCCCcCc---cChHHhCCeEeecCcHHHHHHHHHHHHH
Confidence 469999999999999999999998 6788999999999999999853 4679999999999887 89999999988
Q ss_pred ccccC-------CCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCC----------CCcEEecCCCCcc
Q 015441 280 TGFAS-------SKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEH----------EEFVKLLEKGVVP 342 (406)
Q Consensus 280 ~~i~~-------~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~----------~~fV~v~~~~~~P 342 (406)
..+.+ +.++|+||||||||+|||++++|++++++++.+|++++|+++|.. ++||+|.+++.+|
T Consensus 219 ~~l~g~~~~~~~~~~~v~~t~~rVPv~rG~~~tv~v~l~~~~t~eei~~~l~~~~~~~~~~~l~~~p~~fV~v~~~~~~P 298 (359)
T 4dpl_A 219 SEVKRNVDEPKLEDVSLAATTHRIATIHGHYEVLYVSFKEETAAEKVKETLENFRGEPQDLKLPTAPSKPIIVMNEDTRP 298 (359)
T ss_dssp TTSCCSSCCSCGGGCEEEEECEECSCSSCEEEEEEEEESSCCCHHHHHHHHHTCCCHHHHTTCTTCCSCSEEEECSTTCC
T ss_pred hhcccccccccccCCceEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHHHhhcccccccccCCCCccEEEcCCCCCC
Confidence 76544 457899999999999999999999999999999999999999988 9999999988899
Q ss_pred ccccccCCC-----cEEEEEEEeCcCCeEEEEEEehhhhHhHHHHHHHHHHHHhC
Q 015441 343 RTHNVRGSN-----YCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLG 392 (406)
Q Consensus 343 ~~~~v~g~n-----~~~v~~~~~~~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~~g 392 (406)
+|+.++|+| .|+|||+++.+.+++.+|+++|||+||||||||||||+|+.
T Consensus 299 ~~~~~~g~~~~~~~~~~Vgr~r~~~~~~l~~~~~~DNL~KGAAg~AVQn~nl~~~ 353 (359)
T 4dpl_A 299 QVYFDRWAGDIPGMSVVVGRLKQVNKRMIRLVSLIHNTVRGAAGGGILAAELLVE 353 (359)
T ss_dssp CHHHHTTCTTTTTCSEEEEEEEEEETTEEEEEEEECTTTTTTHHHHHHHHHHHHH
T ss_pred CHHHhhccCCCcCCeEEEEEEEEcCCCEEEEEEEEhhhhHhHHHHHHHHHHHHHH
Confidence 999998776 49999988545779999999999999999999999999975
No 8
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=100.00 E-value=5.4e-74 Score=576.29 Aligned_cols=308 Identities=20% Similarity=0.354 Sum_probs=269.4
Q ss_pred cCCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccc-------cCCCcccccCcccCCCCCE
Q 015441 60 SEKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLIS-------QDLPTMVAVKDADFSNVDA 132 (406)
Q Consensus 60 ~~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~-------~~~~~~~~~~~~~~~~vDv 132 (406)
+.+++||||+|||||+|++|+|+|++||++|++.++|++++|+++.+++||... .++. +++.+++++.++|+
T Consensus 4 M~~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~-v~~~~~~~~~~vDv 82 (359)
T 4dpk_A 4 MRRTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADME-IKPTDPKLMDDVDI 82 (359)
T ss_dssp --CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCB-CEECCGGGCTTCCE
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccce-EEeCCHHHhcCCCE
Confidence 345689999999999999999999999999999999999999999998886321 2332 34455566789999
Q ss_pred EEEcCCCcchHHHHhhC-CCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchhhcc---C-------
Q 015441 133 VFCCLPHGTTQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIK---N------- 201 (406)
Q Consensus 133 VF~al~~~~s~~~~~~l-~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~~i~---~------- 201 (406)
||+|+|++.++++++.+ ++|++|||+|++||+++ ++| ||+||+|++++. +
T Consensus 83 vf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~--------~~p-----------~~vpEvN~~~i~~i~~~~~~~~~ 143 (359)
T 4dpk_A 83 IFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDP--------DVP-----------LLVPELNPHTISLIDEQRKRREW 143 (359)
T ss_dssp EEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCT--------TSC-----------BCCTTTCGGGGGHHHHHHHHHTC
T ss_pred EEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCC--------Ccc-----------EEEcCCCHHHHhhHhhccccccc
Confidence 99999999999999875 88999999999999976 233 677777777753 2
Q ss_pred -CcEEecCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhcccHHHHhcCcccccCCc-ccchhhhhhhh
Q 015441 202 -ARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLYSEIAEGIYSYGVTR-HRHVPEIEQGL 279 (406)
Q Consensus 202 -~~iVanPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~~e~~~ni~py~~~~-h~h~pEi~~~l 279 (406)
+++|||||||||+++++|+||+++ +++++++|+|+||+||||+.+.. +.++++|++||..+. |+|+||+++.|
T Consensus 144 ~~~iIanPgC~tt~~~l~L~PL~~~--~gi~~v~v~t~~g~SGaG~~~~~---~~~~~~N~ipy~~~~e~k~~~Ei~kil 218 (359)
T 4dpk_A 144 KGFIVTTPLCTAQGAAIPLGAIFKD--YKMDGAFITTIQSLSGAGYPGIP---SLDVVDNILPLGDGYDAKTIKEIFRIL 218 (359)
T ss_dssp SSEEEECCCHHHHHHHHHHHHHHHH--SCEEEEEEEEEECSGGGCSSCSB---GGGTTTCCEECCHHHHHHHHHHHHHHH
T ss_pred CccEEECCCcHHHHHHHHHHHHHHh--cCCcEEEEEEEeccccCCCcCcc---ChHHhCCeEeecCcHHHHHHHHHHHHH
Confidence 469999999999999999999998 67889999999999999999644 468899999999887 89999999988
Q ss_pred ccccC-------CCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCC----------CCcEEecCCCCcc
Q 015441 280 TGFAS-------SKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEH----------EEFVKLLEKGVVP 342 (406)
Q Consensus 280 ~~i~~-------~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~----------~~fV~v~~~~~~P 342 (406)
..+.+ +.++|+||||||||+|||++++|++++++++.+|++++|+++|.. ++||+|.+++.+|
T Consensus 219 ~~l~g~~~~~~~~~~~v~~t~~rVPv~rG~~~tv~v~l~~~~t~eei~~~l~~~~~~~~~~~l~~~p~~fV~v~~~~~~P 298 (359)
T 4dpk_A 219 SEVKRNVDEPKLEDVSLAATTHRIATIHGHYEVLYVSFKEETAAEKVKETLENFRGEPQDLKLPTAPSKPIIVMNEDTRP 298 (359)
T ss_dssp HTSCCSCCCSCGGGCEEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHHTCCCHHHHTTCTTCCSCSEEECCSTTCC
T ss_pred hhcccccccccccCCceEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHHHhhcccccccccCCCCccEEEcCCCCCC
Confidence 76554 457899999999999999999999999999999999999999988 9999999988899
Q ss_pred ccccccCCC-----cEEEEEEEeCcCCeEEEEEEehhhhHhHHHHHHHHHHHHhC
Q 015441 343 RTHNVRGSN-----YCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLG 392 (406)
Q Consensus 343 ~~~~v~g~n-----~~~v~~~~~~~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~~g 392 (406)
+|+.++|+| .|+|||+++.+.+++.+|+++|||+||||||||||||+|+.
T Consensus 299 ~~~~~~g~~~~~~~~~~Vgr~r~~~~~~l~~~~~~DNL~KGAAg~AVQn~nl~~~ 353 (359)
T 4dpk_A 299 QVYFDRWAGDIPGMSVVVGRLKQVNKRMIRLVSLIHNTVRGAAGGGILAAELLVE 353 (359)
T ss_dssp CHHHHTTCTTTTTCSEEEEEEEEEETTEEEEEEEECTTTTTTHHHHHHHHHHHHH
T ss_pred CHHHhhccCCCcCCeEEEEEEEEcCCCEEEEEEEEhhhhHhHHHHHHHHHHHHHH
Confidence 999998776 49999988545779999999999999999999999999975
No 9
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=100.00 E-value=4.1e-73 Score=568.79 Aligned_cols=315 Identities=23% Similarity=0.376 Sum_probs=280.9
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEe-ccCcCCccccccccCcc-------ccCCCcccccCcccCCCCCEE
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT-ADRKAGQSIGSVFPHLI-------SQDLPTMVAVKDADFSNVDAV 133 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~-s~~~~G~~i~~v~p~l~-------~~~~~~~~~~~~~~~~~vDvV 133 (406)
+|+||+|+||||++|++++|+|.+||++|+++++ +++++|+.+.++||++. +.++. +.+.++++|.++|+|
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~vDvV 81 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLP-IVSTNYEDHKDVDVV 81 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCB-EECSSGGGGTTCSEE
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeE-EeeCCHHHhcCCCEE
Confidence 4689999999999999999999999999999997 67789999999888762 22332 333444556789999
Q ss_pred EEcCCCcchHHHHhhC-CCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchhhcc-CCcEEecCCCh
Q 015441 134 FCCLPHGTTQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIK-NARLVANPGCY 211 (406)
Q Consensus 134 F~al~~~~s~~~~~~l-~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~~i~-~~~iVanPgC~ 211 (406)
|+|+|++.++++++.+ ++|++|||+|++|||++ +.|+.+||+|.+ .||+||++|++++ ++++|||||||
T Consensus 82 f~atp~~~s~~~a~~~~~aG~~VId~s~~~R~~~--------~~~~~vpevn~~-~~~~~e~~r~~~~~~~~iIanpgC~ 152 (350)
T 2ep5_A 82 LSALPNELAESIELELVKNGKIVVSNASPFRMDP--------DVPLINPEINWE-HLELLKFQKERKGWKGILVKNPNCT 152 (350)
T ss_dssp EECCCHHHHHHHHHHHHHTTCEEEECSSTTTTCT--------TSCBCCHHHHGG-GGGGHHHHHHHHTCSSEEEECCCHH
T ss_pred EECCChHHHHHHHHHHHHCCCEEEECCccccCCC--------CCCeeCCccCHH-HhcChHhhhhhcccCceEEEcCchH
Confidence 9999999999999875 78999999999999996 478999999876 6999999999887 78999999999
Q ss_pred HHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhcccHHHHhcCcccccCCc-ccchhhhhhhhccccC-----C
Q 015441 212 PTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLYSEIAEGIYSYGVTR-HRHVPEIEQGLTGFAS-----S 285 (406)
Q Consensus 212 tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~~e~~~ni~py~~~~-h~h~pEi~~~l~~i~~-----~ 285 (406)
||+++++|+||+++ +++++++|+|+||+||+|+.+. ++.++++|++||+.+. |+|+||+++.|..+.+ +
T Consensus 153 tt~~~l~l~pL~~~--~gi~~i~v~t~~~~SGaG~~~~---~~~~~~~ni~py~~~~e~k~~~E~~~~l~~~~g~~~~~~ 227 (350)
T 2ep5_A 153 AAIMSMPIKPLIEI--ATKSKIIITTLQAVSGAGYNGI---SFMAIEGNIIPYIKGEEDKIAKELTKLNGKLENNQIIPA 227 (350)
T ss_dssp HHHHHHHHGGGHHH--HHTSEEEEEEEECGGGGCSSSS---BHHHHTTCCBCCCTTHHHHHHHHHHHHTCEECSSSEECC
T ss_pred HHHHHHHHHHHHHh--cCCcEEEEEEEEecCcCCCCCC---CChHHhCCEEeccCCcchHHHHHHHHHHhhccccccccc
Confidence 99999999999997 6788999999999999999953 5679999999999995 9999999998877655 3
Q ss_pred CceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcC----------CCCcEEecCCCCccccccccCCCc---
Q 015441 286 KVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYE----------HEEFVKLLEKGVVPRTHNVRGSNY--- 352 (406)
Q Consensus 286 ~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~----------~~~fV~v~~~~~~P~~~~v~g~n~--- 352 (406)
.++|+|||||||++|||++++|++++++++.+||+++|+++|. +++||++.+++.+|+|+.++|+|.
T Consensus 228 ~~~v~~t~~rvP~~~g~~~~i~~~l~~~~t~eei~~~~~~~~~~~~~~~~~~~~~~fv~v~~~~~~P~~~~~~~~~~~~~ 307 (350)
T 2ep5_A 228 NLDSTVTSIRVPTRVGHMGVINIVTNERINIEEIKKTLKNFKSLPQQKNLPTAPKQPIIVRDEEDRPQPIIDVNAESGMA 307 (350)
T ss_dssp CCEEEEEEEECSCSSCEEEEEEEECCSCCCHHHHHHHHHTCCCHHHHTTCTTCCSCSEEECCSTTCCCHHHHTTHHHHTS
T ss_pred cccEEEEeEEecccceEEEEEEEEECCCCCHHHHHHHHHHhhccccccccCCCCCCcEEECCCCCCCceEEecccCCCce
Confidence 6799999999999999999999999999999999999999998 999999999888999998887765
Q ss_pred EEEEEEEeCcCCeEEEEEEehhhhHhHHHHHHHHHHHHhC
Q 015441 353 CLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLG 392 (406)
Q Consensus 353 ~~v~~~~~~~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~~g 392 (406)
|+|||++.+. +++.+|+++|||+||||||||||||+|++
T Consensus 308 ~~vgr~~~d~-~~l~~~~~~DNl~kGAAg~Avqn~nl~~~ 346 (350)
T 2ep5_A 308 VTVGRIRHEN-NVLRLVVLGDNLVRGAAGITILTVEVMKE 346 (350)
T ss_dssp EEEEEEEEET-TEEEEEEEECTTTTTTHHHHHHHHHHHHH
T ss_pred EEEEEEEecC-CEEEEEEEeccHHHhHHHHHHHHHHHHHh
Confidence 9999876544 57999999999999999999999999986
No 10
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=100.00 E-value=5.3e-71 Score=554.98 Aligned_cols=301 Identities=21% Similarity=0.302 Sum_probs=259.2
Q ss_pred CccEEEEECcccHHHHHHHHHHHcC--CCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANH--PYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~h--p~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~ 139 (406)
|++||+|+|||||+|++|+|+|++| |..+++.+++++++|+++.. .+.++. +++.+++++.++|+||+|+|+
T Consensus 1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~-----~~~~~~-~~~~~~~~~~~~Dvvf~a~~~ 74 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKF-----KDQDIT-IEETTETAFEGVDIALFSAGS 74 (366)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEE-----TTEEEE-EEECCTTTTTTCSEEEECSCH
T ss_pred CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCccee-----cCCCce-EeeCCHHHhcCCCEEEECCCh
Confidence 5789999999999999999999986 99999999999999999873 333332 445555667899999999999
Q ss_pred cchHHHHhhC-CCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchhhccC-CcEEecCCChHHHHHH
Q 015441 140 GTTQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKN-ARLVANPGCYPTSIQL 217 (406)
Q Consensus 140 ~~s~~~~~~l-~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~~i~~-~~iVanPgC~tta~~l 217 (406)
+.++++++.+ ++|++|||+|++|||+++ . .|++||+|++.++. +++|||||||||++++
T Consensus 75 ~~s~~~a~~~~~~G~~vIDlSa~~R~~~~--------~-----------p~~vpevN~~~i~~~~~iIanpgC~tt~~~l 135 (366)
T 3pwk_A 75 STSAKYAPYAVKAGVVVVDNTSYFRQNPD--------V-----------PLVVPEVNAHALDAHNGIIACPNCSTIQMMV 135 (366)
T ss_dssp HHHHHHHHHHHHTTCEEEECSSTTTTCTT--------S-----------CBCCHHHHGGGGTTCCSEEECCCHHHHHHHH
T ss_pred HhHHHHHHHHHHCCCEEEEcCCccccCCC--------c-----------eEEEccCCHHHHcCCCCeEECCCcHHHHHHH
Confidence 9999999875 789999999999999762 2 37888899988887 8999999999999999
Q ss_pred HHHHHHHccCCCcceEEEEEeeccCccCcchhhcccHH--H-Hhc-------CcccccCC-cccc-------hhhhhhhh
Q 015441 218 PLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLYS--E-IAE-------GIYSYGVT-RHRH-------VPEIEQGL 279 (406)
Q Consensus 218 ~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~~--e-~~~-------ni~py~~~-~h~h-------~pEi~~~l 279 (406)
+|+||++. +++++++|+|+||+||||+++++++++. + .++ +.++|+++ .||| +|||++.+
T Consensus 136 ~l~pL~~~--~~i~~i~v~t~~~vSGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~y~~~~~HrH~~ia~NviP~I~~~~ 213 (366)
T 3pwk_A 136 ALEPVRQK--WGLDRIIVSTYQAVSGAGMGAILETQRELREVLNDGVKPCDLHAEILPSGGDKKHYPIAFNALPQIDVFT 213 (366)
T ss_dssp HHHHHHHH--HCCSEEEEEEEBCGGGGCHHHHHHHHHHHHHHHHHCCCGGGCCCSSSSCTTSSCCCCCTTCCBCCSSCBC
T ss_pred HHHHHHHh--CCCcEEEEEEEEeccccCcchhhHHHHHHHHHhcccccccccCcccCCcccccccchhhccccceecccc
Confidence 99999998 4678999999999999999999975432 1 232 56778764 5999 99997533
Q ss_pred ---------------cccc-CCCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCCCcEEecCCC---C
Q 015441 280 ---------------TGFA-SSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHEEFVKLLEKG---V 340 (406)
Q Consensus 280 ---------------~~i~-~~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~~fV~v~~~~---~ 340 (406)
.+++ +..++|+||||||||+|||++|+|++++++++.+|++++|+++ |||++.+++ .
T Consensus 214 ~~g~t~EE~k~~~E~~kil~~~~~~v~ftp~rVPv~rG~~~tv~v~l~~~~s~eei~~~l~~~----~~V~v~~~~~~~~ 289 (366)
T 3pwk_A 214 DNDYTYEEMKMTKETKKIMEDDSIAVSATCVRIPVLSAHSESVYIETKEVAPIEEVKAAIAAF----PGAVLEDDVAHQI 289 (366)
T ss_dssp TTSSBHHHHHHHHHHHHHTTCTTSEEEEECCBCSCSSCEEEEEEEECSSCCCHHHHHHHHHHS----TTEEECCBGGGTB
T ss_pred cCCCcHHHHHHHHHHHHHhcCCCCCeEEEEEEechhccEEEEEEEEECCCCCHHHHHHHHHhC----CCcEEecCcccCC
Confidence 2444 4678999999999999999999999999999999999999997 899998753 5
Q ss_pred ccccccccCCCcEEEEEEEeC--cCCeEEEEEEehhhhHhHHHHHHHHHHHHhCC
Q 015441 341 VPRTHNVRGSNYCLMNVFPDR--IPGRAIIISVIDNLVKGASGQALQNLNIMLGF 393 (406)
Q Consensus 341 ~P~~~~v~g~n~~~v~~~~~~--~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~~g~ 393 (406)
+|+|+++.|+|.|+|||++.+ .++++++|+++|||+||||||||||||+|++.
T Consensus 290 ~P~~~~v~gtn~~~Vgr~r~d~~~~~~l~~~~~~DNL~KGAAg~AVQn~nlm~~~ 344 (366)
T 3pwk_A 290 YPQAINAVGSRDTFVGRIRKDLDAEKGIHMWVVSDNLLKGAAWNSVQIAETLHER 344 (366)
T ss_dssp CCCHHHHTTCSSEEEEEEEECSSCTTEEEEEEEECTTTTTTHHHHHHHHHHHHHT
T ss_pred CCchhHcCCCCEEEEEEEEecCCCCCEEEEEEEEccHHHhHHHHHHHHHHHHHHc
Confidence 899999999999999998754 35789999999999999999999999999875
No 11
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=2e-70 Score=549.99 Aligned_cols=315 Identities=19% Similarity=0.339 Sum_probs=277.5
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEe-ccCcCCccccccccCcc-------ccCCCcccccCcccC-C-CCC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT-ADRKAGQSIGSVFPHLI-------SQDLPTMVAVKDADF-S-NVD 131 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~-s~~~~G~~i~~v~p~l~-------~~~~~~~~~~~~~~~-~-~vD 131 (406)
||+||+|+||||++|++++|+|.+||++++++++ +++++|+.++++|+++. +.++. +...+.++| . ++|
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~D 85 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMV-VIPTDPKHEEFEDVD 85 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCB-CEESCTTSGGGTTCC
T ss_pred ccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeE-EEeCCHHHHhcCCCC
Confidence 4589999999999999999999999999999997 56788999988888762 12332 222344456 5 899
Q ss_pred EEEEcCCCcchHHHHhhC-CCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchhhcc-CCcEEecCC
Q 015441 132 AVFCCLPHGTTQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIK-NARLVANPG 209 (406)
Q Consensus 132 vVF~al~~~~s~~~~~~l-~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~~i~-~~~iVanPg 209 (406)
+||+|+|++.++++++.+ ++|++|||+|++|||++ +.|+.+||+|.+ .|+++|++|++++ ++++|+|||
T Consensus 86 vV~~atp~~~~~~~a~~~~~aG~~VId~s~~~R~~~--------~~~~~vpevn~~-~~~~~e~~r~~~~~~~~iIanpg 156 (354)
T 1ys4_A 86 IVFSALPSDLAKKFEPEFAKEGKLIFSNASAYRMEE--------DVPLVIPEVNAD-HLELIEIQREKRGWDGAIITNPN 156 (354)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTCEEEECCSTTTTCT--------TSCBCCHHHHGG-GGGHHHHHHHHHCCSSEEEECCC
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEECCchhcCCC--------CCCccCcccCHH-HhcChhhhhhhcccCCeEEECCC
Confidence 999999999999999875 78999999999999986 468999999876 6999999998887 788999999
Q ss_pred ChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhcccHHHHhcCcccccCCc-ccchhhhhhhhccccC----
Q 015441 210 CYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLYSEIAEGIYSYGVTR-HRHVPEIEQGLTGFAS---- 284 (406)
Q Consensus 210 C~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~~e~~~ni~py~~~~-h~h~pEi~~~l~~i~~---- 284 (406)
||||+++++|+||+++ +++++++++|+||+||+|+.+. ++.++++|++||+.+. |+|+||+++.|..+.+
T Consensus 157 C~tt~~~l~l~pL~~~--~gi~~~~v~t~~~~SGaG~~~~---~~~~~~~ni~py~~~~~~k~~~Ei~~~l~~~~g~~~~ 231 (354)
T 1ys4_A 157 CSTICAVITLKPIMDK--FGLEAVFIATMQAVSGAGYNGV---PSMAILDNLIPFIKNEEEKMQTESLKLLGTLKDGKVE 231 (354)
T ss_dssp HHHHHHHHHHHHHHHH--HCCSEEEEEEEBCSGGGCTTTS---CHHHHTTCCBSCCTTHHHHHHHHHHHHTSEEETTEEE
T ss_pred HHHHHHHHHHHHHHHh--cCCcEEEEEEEEEcCcCCcccc---cchHHhCCEEeccCchhhHHHHHHHHHHhcccccccc
Confidence 9999999999999996 3568999999999999999853 5679999999999995 9999999998876544
Q ss_pred -CCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcC---------CCCcEEecCCCCccccccccCCCc--
Q 015441 285 -SKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYE---------HEEFVKLLEKGVVPRTHNVRGSNY-- 352 (406)
Q Consensus 285 -~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~---------~~~fV~v~~~~~~P~~~~v~g~n~-- 352 (406)
..++|+|+||||||+|||++++|++++++++.|||+++|+++|. + |||+|.+++.+|+|+.+.|+|.
T Consensus 232 ~~~~~v~~~~~rvP~~~G~~~~i~~~l~~~~t~eei~~~~~~~~~~~~~~~~~~~-~fv~v~~~~~~p~~~~~~~~~~~~ 310 (354)
T 1ys4_A 232 LANFKISASCNRVAVIDGHTESIFVKTKEGAEPEEIKEVMDKFDPLKDLNLPTYA-KPIVIREEIDRPQPRLDRNEGNGM 310 (354)
T ss_dssp CCCCEEEEECCBCSCSSCEEEEEEEECSSCCCHHHHHHHHHHCCTTTTSCCTTCC-CSEEECCSTTCCCHHHHTTGGGGT
T ss_pred CCCceEEEEEEEecccceEEEEEEEEECCCCCHHHHHHHHHHhhccccccccCCC-CcEEEecCCCCCCceeecccCCCc
Confidence 35789999999999999999999999999999999999999997 8 9999999888999999888876
Q ss_pred -EEEEEEEeCcCCeEEEEEEehhhhHhHHHHHHHHHHHHhC
Q 015441 353 -CLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLG 392 (406)
Q Consensus 353 -~~v~~~~~~~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~~g 392 (406)
|+||+++.+..+++.+|+++|||+||||||||||||+|++
T Consensus 311 ~~~vgr~~~~~~~~~~~~~~~DNl~kGAAg~Avqn~nl~~~ 351 (354)
T 1ys4_A 311 SIVVGRIRKDPIFDVKYTALEHNTIRGAAGASVLNAEYFVK 351 (354)
T ss_dssp SEEEEEEEECSSSSEEEEEEECTTTTTTHHHHHHHHHHHHH
T ss_pred eEEEeeEeeCCCCeEEEEEEehhhHHhHHHHHHHHHHHHHH
Confidence 9999887655468999999999999999999999999984
No 12
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=100.00 E-value=3e-70 Score=545.65 Aligned_cols=294 Identities=19% Similarity=0.276 Sum_probs=254.6
Q ss_pred cEEEEECcccHHHHHHHHHHHcC--CCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANH--PYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~h--p~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
+||||+|||||+|++|+|+|++| |.++++.++|++++|+++. |.+.++. +++.++++|.++|+||+|+|++.
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~-----~~~~~~~-~~~~~~~~~~~~Dvvf~a~~~~~ 75 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLA-----FRGQEIE-VEDAETADPSGLDIALFSAGSAM 75 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEE-----ETTEEEE-EEETTTSCCTTCSEEEECSCHHH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCcee-----ecCCceE-EEeCCHHHhccCCEEEECCChHH
Confidence 68999999999999999999987 9999999999999999987 3343432 44555667789999999999999
Q ss_pred hHHHHhhC-CCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccch-hhccC--CcEEecCCChHHHHHH
Q 015441 142 TQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISR-EDIKN--ARLVANPGCYPTSIQL 217 (406)
Q Consensus 142 s~~~~~~l-~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~-~~i~~--~~iVanPgC~tta~~l 217 (406)
++++++.+ ++|++|||+|++|||+++ .| |++||+|+ +.++. .++|||||||||++++
T Consensus 76 s~~~a~~~~~~G~~vID~Sa~~R~~~~--------~p-----------~~vpevN~~~~i~~~~~~iIanpgC~tt~~~l 136 (344)
T 3tz6_A 76 SKVQAPRFAAAGVTVIDNSSAWRKDPD--------VP-----------LVVSEVNFERDAHRRPKGIIANPNCTTMAAMP 136 (344)
T ss_dssp HHHHHHHHHHTTCEEEECSSTTTTCTT--------SC-----------BCCTTTSHHHHTTCCTTSEEECCCHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEECCCccccCCC--------cc-----------EEEccCCCHHHhhhcCCCEEECCCcHHHHHHH
Confidence 99999875 789999999999999762 33 67888888 77876 4899999999999999
Q ss_pred HHHHHHHccCCCcceEEEEEeeccCccCcchhhcccHHHHh------------------------cCcccccCCc-----
Q 015441 218 PLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLYSEIA------------------------EGIYSYGVTR----- 268 (406)
Q Consensus 218 ~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~~e~~------------------------~ni~py~~~~----- 268 (406)
+|+||++++ ++++++|+|+||+||||++++++++ .++. .+..+|++..
T Consensus 137 ~l~pL~~~~--~i~~i~v~t~~~~SGAG~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aynv~p~i~~~ 213 (344)
T 3tz6_A 137 VLKVLHDEA--RLVRLVVSSYQAVSGSGLAGVAELA-EQARAVIGGAEQLVYDGGALEFPPPNTYVAPIAFNVVPLAGSL 213 (344)
T ss_dssp HHHHHHHHH--CEEEEEEEEEBCGGGGCHHHHHHHH-HHHHHHGGGGGGGGTCTTSSCCCCCSSSSSCCTTCCBCCCSCB
T ss_pred HHHHHHHhC--CCceEEEEeccCCCccChhhhHHHH-HHHHhhhcccccccccccccccccccccccccccccccccccc
Confidence 999999984 6789999999999999999998854 3332 2335566554
Q ss_pred ----ccchhh---hhhhhccccC-CCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCCCcEEecCCCC
Q 015441 269 ----HRHVPE---IEQGLTGFAS-SKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHEEFVKLLEKGV 340 (406)
Q Consensus 269 ----h~h~pE---i~~~l~~i~~-~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~~fV~v~~~~~ 340 (406)
|||+|| |.+++.++++ +.++|+||||||||+|||++++|++++++++.+|++++|+++ |||++.+
T Consensus 214 ~~~ghrHt~EE~k~~~e~~kilg~~~~~v~ft~vrvPv~rGh~~tv~v~l~~~~s~eei~~~l~~~----p~V~v~~--- 286 (344)
T 3tz6_A 214 VDDGSGETDEDQKLRFESRKILGIPDLLVSGTCVRVPVFTGHSLSINAEFAQPLSPERARELLDGA----TGVQLVD--- 286 (344)
T ss_dssp CSSSSCCBHHHHHHHHHHHHHHTCTTCEEEEECCBCSCSSCEEEEEEEEESSCCCHHHHHHHHHHC----TTEEECS---
T ss_pred ccCCCcCCHHHHHHHHHHHHhcCCCCCceEEEEEEeceeceEEEEEEEEECCCCCHHHHHHHHhcC----CCeEEEC---
Confidence 599999 7777778887 678999999999999999999999999999999999999964 9999986
Q ss_pred ccccccccCCCcEEEEEEEeCc----CCeEEEEEEehhhhHhHHHHHHHHHHHHhC
Q 015441 341 VPRTHNVRGSNYCLMNVFPDRI----PGRAIIISVIDNLVKGASGQALQNLNIMLG 392 (406)
Q Consensus 341 ~P~~~~v~g~n~~~v~~~~~~~----~~~~~~~~v~DNL~KGAAgqAVQ~~nl~~g 392 (406)
+|+|+++.|+|.|+|||++.+. .+++.+|+++|||+||||||||||||+|+.
T Consensus 287 ~P~p~~v~gtn~~~Vgrir~d~~~~~~~~l~~~~~~DNL~KGAAg~AVQ~anll~~ 342 (344)
T 3tz6_A 287 VPTPLAAAGVDESLVGRIRRDPGVPDGRGLALFVSGDNLRKGAALNTIQIAELLTA 342 (344)
T ss_dssp SCCHHHHTTCSSEEEEEEEECTTSGGGCEEEEEEEECTTTTTTHHHHHHHHHHHTC
T ss_pred CCChHHhCCCceEEEEEEEecCCCCCCCEEEEEEEEcchhHhHHHHHHHHHHHHHh
Confidence 8999999999999999887653 348999999999999999999999999974
No 13
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=100.00 E-value=6.5e-70 Score=548.70 Aligned_cols=299 Identities=16% Similarity=0.201 Sum_probs=252.6
Q ss_pred ccEEEEECcccHHHHHHHH-HHHcCC--CceEEEEeccCcCCccccccccCccccCCCccccc-CcccCCCCCEEEEcCC
Q 015441 63 QVRIGLLGASGYTGAEIVR-LLANHP--YFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAV-KDADFSNVDAVFCCLP 138 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlr-lL~~hp--~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~-~~~~~~~vDvVF~al~ 138 (406)
++||||+|||||+|++|+| +|++|| ..+++.++++ ++|+++.. |.+.++. +++. ++++|.++|+||+|+|
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~aG~~~~~----~~~~~~~-v~~~~~~~~~~~vDvvf~a~~ 77 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-NAGGKAPS----FAKNETT-LKDATSIDDLKKCDVIITCQG 77 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-CTTSBCCT----TCCSCCB-CEETTCHHHHHTCSEEEECSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-hcCCCHHH----cCCCceE-EEeCCChhHhcCCCEEEECCC
Confidence 3799999999999999999 999998 6889888876 89998765 2333332 3333 2345679999999999
Q ss_pred CcchHHHHhhC-CCCC--EEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchhhccC---C--cEEecCCC
Q 015441 139 HGTTQEIIKGL-PKSL--KIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKN---A--RLVANPGC 210 (406)
Q Consensus 139 ~~~s~~~~~~l-~~G~--~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~~i~~---~--~iVanPgC 210 (406)
++.++++++.+ ++|+ +|||+|++||++++ . .|++||+|++.++. . ++||||||
T Consensus 78 ~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~--------~-----------p~~vpevN~~~i~~~~~~~i~~Ianp~C 138 (377)
T 3uw3_A 78 GDYTNDVFPKLRAAGWNGYWIDAASSLRMKDD--------A-----------VIILDPVNLNVIKDALVNGTKNFIGGNC 138 (377)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEECSSTTTTCTT--------E-----------EEECHHHHHHHHHHHHHTTCCEEEECCH
T ss_pred hHHHHHHHHHHHHCCCCEEEEeCCcccccCCC--------C-----------ceECCcCCHHHHhhhhhcCCcEEEcCCH
Confidence 99999999875 7886 89999999999762 2 36777777777753 2 45999999
Q ss_pred hHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhcccHHH----------------------------------
Q 015441 211 YPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLYSE---------------------------------- 256 (406)
Q Consensus 211 ~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~~e---------------------------------- 256 (406)
|||+++++|+||+++ +++++++|+|+||+||||++++++++ .|
T Consensus 139 ~tt~~~l~L~pL~~~--~~I~~i~v~t~~avSGAG~~~~~el~-~q~~~l~~~~~~~~~~p~~~ild~~~~~~~~~~~~~ 215 (377)
T 3uw3_A 139 TVSLMLMALGGLFRE--NLVDWMTAMTYQAASGAGAQNMRELL-AQMGTLNGAVAAQLADPASAILDIDRRVLAAMNGDA 215 (377)
T ss_dssp HHHHHHHHHHHHHHT--TCEEEEEEEEEBCGGGTCHHHHHHHH-HHHHHHHHTTHHHHTCTTSCHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHh--CCCCEEEEeeeecccccchhhHHHHH-HHHHHhhccccccccccccccccccccccccccccc
Confidence 999999999999998 46789999999999999999988643 22
Q ss_pred ---------HhcCcccccCC--cccchhh---hhhhhccccCC-------CceEEEEEEEeeecceeEEEEEEEeCCCCC
Q 015441 257 ---------IAEGIYSYGVT--RHRHVPE---IEQGLTGFASS-------KVTVSFTPHLMPMIRGMQSTIYVEMAPGVT 315 (406)
Q Consensus 257 ---------~~~ni~py~~~--~h~h~pE---i~~~l~~i~~~-------~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s 315 (406)
++.|+.||... .|+|.+| |++++.++++. .++|+||||||||+|||++++|++|+++++
T Consensus 216 ~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~~~~~i~Vs~t~vrVPv~rGh~~tv~v~~~~~~~ 295 (377)
T 3uw3_A 216 MPTSQFGVPLAGSLIPWIDKDLGNGMSREEWKGGAETNKILGKPAMGEPGSVPVDGLCVRIGAMRCHSQALTIKLKKDVP 295 (377)
T ss_dssp SCCTTTSSCCTBSCBSCCSCBCSSSCBHHHHHHHHHHHHHHTCCCTTSTTCCCEEEECCBCSBSSEEEEEEEEEESSCCC
T ss_pred cccccccccccCceEEeecccccCCCCHHHHHHHHHHHHHhcccccccCCCceEEEEeEEecccceEEEEEEEEeCCCCC
Confidence 34688888653 5665554 88888888875 789999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCcEEecCCC-----CccccccccCCCcEEEEEEEeC--cCCeEEEEEEehhhhHhHHHHHHHHHH
Q 015441 316 IEDLYQQLKISYEHEEFVKLLEKG-----VVPRTHNVRGSNYCLMNVFPDR--IPGRAIIISVIDNLVKGASGQALQNLN 388 (406)
Q Consensus 316 ~eev~~~l~~~y~~~~fV~v~~~~-----~~P~~~~v~g~n~~~v~~~~~~--~~~~~~~~~v~DNL~KGAAgqAVQ~~n 388 (406)
.+|++++|+++ +|||++++++ .+|+|+++.|+|.|+|||+|.+ .++++.+|+++|||+||||||||||||
T Consensus 296 ~eei~~~l~~~---~p~V~v~~~~~~~~~~~P~p~~v~G~n~v~VGrir~d~~~~~~l~~~~v~DNL~KGAAgqAvqn~n 372 (377)
T 3uw3_A 296 LDEINGILASA---NDWVKVVPNEREASMRDLSPAKVTGTLSVPVGRLRKLAMGGEYLSAFTVGDQLLWGAAEPLRRMLR 372 (377)
T ss_dssp HHHHHHHHHTS---CSSEEECCSSHHHHHHHSSHHHHTTSSCEEEEEEEECTTCTTEEEEEEEEETTCCCCCHHHHHHHH
T ss_pred HHHHHHHHHhC---CCCEEEecCCcccccCCCCHHHhcCCCcEEEEEEEECCCCCCEEEEEEEehhhhHhHHHHHHHHHH
Confidence 99999999987 5899999875 4899999999999999998854 357999999999999999999999999
Q ss_pred HHhC
Q 015441 389 IMLG 392 (406)
Q Consensus 389 l~~g 392 (406)
+|+.
T Consensus 373 l~~~ 376 (377)
T 3uw3_A 373 ILLD 376 (377)
T ss_dssp HHHC
T ss_pred HHhh
Confidence 9983
No 14
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=100.00 E-value=1.3e-69 Score=545.28 Aligned_cols=297 Identities=14% Similarity=0.197 Sum_probs=250.5
Q ss_pred cEEEEECcccHHHHHHHH-HHHcCC--CceEEEEeccCcCCccccccccCccccCCCccccc-CcccCCCCCEEEEcCCC
Q 015441 64 VRIGLLGASGYTGAEIVR-LLANHP--YFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAV-KDADFSNVDAVFCCLPH 139 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlr-lL~~hp--~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~-~~~~~~~vDvVF~al~~ 139 (406)
+||||+|||||+|++|+| +|++|| ..+++++++++ +|+++.+. .+.++. +++. ++++|.++|+||+|+|+
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~~~----~~~~~~-~~~~~~~~~~~~~Dvvf~a~~~ 74 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAPNF----GKDAGM-LHDAFDIESLKQLDAVITCQGG 74 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCCS----SSCCCB-CEETTCHHHHTTCSEEEECSCH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHHHh----CCCceE-EEecCChhHhccCCEEEECCCh
Confidence 589999999999999999 999998 68898898876 99987652 333332 3333 23457899999999999
Q ss_pred cchHHHHhhC-CCCC--EEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchhhccC---C--cEEecCCCh
Q 015441 140 GTTQEIIKGL-PKSL--KIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKN---A--RLVANPGCY 211 (406)
Q Consensus 140 ~~s~~~~~~l-~~G~--~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~~i~~---~--~iVanPgC~ 211 (406)
+.++++++.+ ++|+ +|||+|++||++++ . .|++||+|+++++. . ++|||||||
T Consensus 75 ~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~--------~-----------p~~vpevN~~~i~~~~~~~i~~Ianp~C~ 135 (370)
T 3pzr_A 75 SYTEKVYPALRQAGWKGYWIDAASTLRMDKE--------A-----------IITLDPVNLKQILHGIHHGTKTFVGGNCT 135 (370)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECSSTTTTCTT--------E-----------EEECHHHHHHHHHHHHHTTCCEEEECCHH
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCchhccCCC--------C-----------cEEcccCCHHHHhhhhhcCCcEEEcCChH
Confidence 9999999875 7785 89999999999762 2 37778888777753 2 469999999
Q ss_pred HHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhcccHHH-----------------------------------
Q 015441 212 PTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLYSE----------------------------------- 256 (406)
Q Consensus 212 tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~~e----------------------------------- 256 (406)
||+++++|+||+++ +++++++|+|+||+||||+++++++ +.|
T Consensus 136 tt~~~l~L~pL~~~--~~I~~i~v~t~~avSGAG~~~~~el-~~q~~~~~~~~~~~l~~p~~~ild~~~~~~~~~~~~~~ 212 (370)
T 3pzr_A 136 VSLMLMALGGLYER--GLVEWMSAMTYQAASGAGAQNMREL-ISQMGVINDAVSSELANPASSILDIDKKVAETMRSGSF 212 (370)
T ss_dssp HHHHHHHHHHHHHT--TCEEEEEEEEEBCGGGTCHHHHHHH-HHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHHHHHHHHh--CCCcEEEEEeEEeccccChhhHHHH-HHHHHHhhcccccccccccccccccccccccccccccc
Confidence 99999999999998 4678999999999999999998864 322
Q ss_pred --------HhcCcccccCC--cccc---hhhhhhhhccccC---CCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHH
Q 015441 257 --------IAEGIYSYGVT--RHRH---VPEIEQGLTGFAS---SKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLY 320 (406)
Q Consensus 257 --------~~~ni~py~~~--~h~h---~pEi~~~l~~i~~---~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~ 320 (406)
++.|+.||... .|+| .++|++++.++++ +.++|+||||||||+|||++++|++|+++++.+|++
T Consensus 213 ~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~i~V~~t~vrVPv~rGh~~tv~v~~~~~~~~~ei~ 292 (370)
T 3pzr_A 213 PTDNFGVPLAGSLIPWIDVKRDNGQSKEEWKAGVEANKILGLQDSPVPIDGTCVRIGAMRCHSQALTIKLKQNIPLDEIE 292 (370)
T ss_dssp CCTTTSSCCTTSEESCCSCBCTTSCBHHHHHHHHHHHHHTTCTTSCCCEECCCCEESCSSEEEEEEEEEESSCCCHHHHH
T ss_pred ccccccccccCceeeeccccccCCCCHHHHHHHHHHHHHhCccCCCceEEEEeEEecccceEEEEEEEEeCCCCCHHHHH
Confidence 23577788643 4544 5559999999988 579999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEecCCC-----CccccccccCCCcEEEEEEEeC-c-CCeEEEEEEehhhhHhHHHHHHHHHHHHh
Q 015441 321 QQLKISYEHEEFVKLLEKG-----VVPRTHNVRGSNYCLMNVFPDR-I-PGRAIIISVIDNLVKGASGQALQNLNIML 391 (406)
Q Consensus 321 ~~l~~~y~~~~fV~v~~~~-----~~P~~~~v~g~n~~~v~~~~~~-~-~~~~~~~~v~DNL~KGAAgqAVQ~~nl~~ 391 (406)
++|+++ +|||++++++ .+|+|+++.|+|.|+|||++.+ . ++++.+|+++|||+||||||||||||+|+
T Consensus 293 ~~l~~~---~p~V~v~~~~~~~~~~~P~p~~v~G~n~v~VGrir~d~~~~~~l~~~~v~DNL~KGAAgqAvQn~Nl~~ 367 (370)
T 3pzr_A 293 EMIATH---NDWVKVIPNERDITARELTPAKVTGTLSVPVGRLRKMAMGDDFLNAFTVGDQLLWGAAEPLRRTLRIIL 367 (370)
T ss_dssp HHHHTS---CSSEEECCSCHHHHHHHSSHHHHTTSCCEEEEEEEEETTEEEEEEEEEEEETTTTTTHHHHHHHHHHHH
T ss_pred HHHHhC---CCCEEEecCCcccccCCCCHHHhcCCccEEEEEEEECCCCCCEEEEEEEehhhhHhHHHHHHHHHHHHH
Confidence 999987 5899999875 4899999999999999998754 2 47899999999999999999999999996
No 15
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=100.00 E-value=1.3e-68 Score=533.46 Aligned_cols=300 Identities=18% Similarity=0.283 Sum_probs=249.7
Q ss_pred CccEEEEECcccHHHHHHHHHHHcC--CCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANH--PYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~h--p~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~ 139 (406)
+|+||+|+||||++|++|+|+|.+| |++|++++++++++|+.+. +.+.++. +.+.+++.|.++|+||+|+|+
T Consensus 2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~-----~~~~~i~-~~~~~~~~~~~vDvVf~a~g~ 75 (336)
T 2r00_A 2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYR-----FNGKTVR-VQNVEEFDWSQVHIALFSAGG 75 (336)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEE-----ETTEEEE-EEEGGGCCGGGCSEEEECSCH
T ss_pred CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCcee-----ecCceeE-EecCChHHhcCCCEEEECCCc
Confidence 3689999999999999999999987 9999999999889998765 2232332 233344567789999999999
Q ss_pred cchHHHHhhC-CCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchhhccC---CcEEecCCChHHHH
Q 015441 140 GTTQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKN---ARLVANPGCYPTSI 215 (406)
Q Consensus 140 ~~s~~~~~~l-~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~~i~~---~~iVanPgC~tta~ 215 (406)
+.++++++.+ ++|++|||+|++||+++ + +.|++||+|++++++ +++|||||||||++
T Consensus 76 ~~s~~~a~~~~~~G~~vId~s~~~R~~~--------~-----------~~~~vpevN~~~i~~~~~~~iIanp~C~tt~~ 136 (336)
T 2r00_A 76 ELSAKWAPIAAEAGVVVIDNTSHFRYDY--------D-----------IPLVVPEVNPEAIAEFRNRNIIANPNCSTIQM 136 (336)
T ss_dssp HHHHHHHHHHHHTTCEEEECSSTTTTCT--------T-----------SCBCCTTTCGGGGGGGGGTTEEECCCHHHHHH
T ss_pred hHHHHHHHHHHHcCCEEEEcCCccccCC--------C-----------CCeEeccCCHHHhccccCCcEEECCChHHHHH
Confidence 9999999875 78999999999999975 2 358888889888875 77999999999999
Q ss_pred HHHHHHHHHccCCCcceEEEEEeeccCccCcchhhcccH--------HHHhcCccccc----CCcc-------cchhh--
Q 015441 216 QLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLY--------SEIAEGIYSYG----VTRH-------RHVPE-- 274 (406)
Q Consensus 216 ~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~--------~e~~~ni~py~----~~~h-------~h~pE-- 274 (406)
+++|+||++++ ++++++|+|+||+||+|++++++++. .+..++..||. +..| +|.||
T Consensus 137 ~~~l~pL~~~~--~i~~~~vtt~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~~Ee~ 214 (336)
T 2r00_A 137 LVALKPIYDAV--GIERINVTTYQSVSGAGKAGIDELAGQTAKLLNGYPAETNTFSQQIAFNCIPQIDQFMDNGYTKEEM 214 (336)
T ss_dssp HHHHHHHHHHH--CEEEEEEEEEEESSSCCTTSCC-----------------------------CCBCTTTCSSCBHHHH
T ss_pred HHHHHHHHHhC--CccEEEEEEEEecccCChhhhHHHHHHHHHhhcCCCCCccccchhhhcCcccccCCcccCCccHHHH
Confidence 99999999984 67899999999999999999988543 12223343332 3344 68999
Q ss_pred -hhhhhccccC-CCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCCCcEEecCCCCccccc-cccCCC
Q 015441 275 -IEQGLTGFAS-SKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHEEFVKLLEKGVVPRTH-NVRGSN 351 (406)
Q Consensus 275 -i~~~l~~i~~-~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~~fV~v~~~~~~P~~~-~v~g~n 351 (406)
+.+.+.++++ ...+|+|||+|||++|||+.++|++++++++.+|++++|+++ |||++.+.+.+|+|+ ++.|+|
T Consensus 215 k~~~e~~kil~~~~~~v~~t~~rVP~~~g~~~~~~~~l~~~~t~~ei~~~~~~~----~~v~v~~~~~~p~~~~~v~g~~ 290 (336)
T 2r00_A 215 KMVWETQKIFNDPSIMVNPTCVRVPVFYGHAEAVHVETRAPIDAEQVMDMLEQT----DGIELFRGADFPTQVRDAGGKD 290 (336)
T ss_dssp HHHHHHHHHTTCTTCEEEEEEEEESSCBSEEEEEEEEESSCCCHHHHHHHHHHS----TTEEECCCCSSGGGCCCCCSSS
T ss_pred HHHHHHHHHhCCCCCcEEEEeEEeccCcEEEEEEEEEeCCCCCHHHHHHHHHhC----CCeEEECCCCCCcCHHHhCCCc
Confidence 8888888875 568999999999999999999999999999999999999984 999999876799999 999999
Q ss_pred cEEEEEEEeC--cCCeEEEEEEehhhhHhHHHHHHHHHHHHhC
Q 015441 352 YCLMNVFPDR--IPGRAIIISVIDNLVKGASGQALQNLNIMLG 392 (406)
Q Consensus 352 ~~~v~~~~~~--~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~~g 392 (406)
.|+|||++.+ .++++++|+++|||+||||||||||||+|++
T Consensus 291 ~~~vgr~~~d~~~~~~l~~~~~~DNl~kGAAg~Avq~~nl~~~ 333 (336)
T 2r00_A 291 HVLVGRVRNDISHHSGINLWVVADNVRKGAATNAVQIAELLVR 333 (336)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEecCCCCCEEEEEEEehhHHHhHHHHHHHHHHHHHh
Confidence 9999988855 4578999999999999999999999999986
No 16
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.6e-67 Score=526.33 Aligned_cols=299 Identities=19% Similarity=0.270 Sum_probs=260.7
Q ss_pred CccEEEEECcccHHHHHHHHHHH--cCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLA--NHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~--~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~ 139 (406)
|++||+|+||||++|++|+|+|. +||.+++++++++++.|+.+. +.+.++. +.+.+++.|.++|+||+|+|+
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~-----~~g~~i~-~~~~~~~~~~~~DvV~~a~g~ 78 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG-----FAESSLR-VGDVDSFDFSSVGLAFFAAAA 78 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE-----ETTEEEE-CEEGGGCCGGGCSEEEECSCH
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccc-----cCCcceE-EecCCHHHhcCCCEEEEcCCc
Confidence 45799999999999999999999 899999999999888887665 2222222 222234457789999999999
Q ss_pred cchHHHHhhC-CCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchhhccCC---cEEecCCChHHHH
Q 015441 140 GTTQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNA---RLVANPGCYPTSI 215 (406)
Q Consensus 140 ~~s~~~~~~l-~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~~i~~~---~iVanPgC~tta~ 215 (406)
+.++++++.+ ++|++|||+|++|| ++ ++ .||+||+|+++++++ ++|||||||||++
T Consensus 79 ~~s~~~a~~~~~aG~kvId~Sa~~r-d~--------~~-----------~~~vpevN~~~i~~~~~~~iIanp~C~tt~~ 138 (340)
T 2hjs_A 79 EVSRAHAERARAAGCSVIDLSGALE-PS--------VA-----------PPVMVSVNAERLASQAAPFLLSSPCAVAAEL 138 (340)
T ss_dssp HHHHHHHHHHHHTTCEEEETTCTTT-TT--------TS-----------CBCCHHHHGGGGGGSCSSCEEECCCHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCC-CC--------CC-----------CeEEcCcCHHHHhcCcCCCEEEcCCHHHHHH
Confidence 9999999875 78999999999999 43 12 488889998888865 7999999999999
Q ss_pred HHHHHHHHHccCCCcceEEEEEeeccCccCcchhhcccHHH------------------HhcCcccccC--Ccccchhh-
Q 015441 216 QLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLYSE------------------IAEGIYSYGV--TRHRHVPE- 274 (406)
Q Consensus 216 ~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~~e------------------~~~ni~py~~--~~h~h~pE- 274 (406)
+++|+||+++ +++++++|+|+||+||+|++++++ ++.| ++.|+.||.. ..|+|.||
T Consensus 139 ~~~l~pL~~~--~~i~~~~v~t~~~~SgaG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~~Ee 215 (340)
T 2hjs_A 139 CEVLAPLLAT--LDCRQLNLTACLSVSSLGREGVKE-LARQTAELLNARPLEPRLFDRQIAFNLLAQVGAVDAEGHSAIE 215 (340)
T ss_dssp HHHHHHHTTT--CCEEEEEEEEEECGGGGCHHHHHH-HHHHHHHHHTTCCCCCSSSSSCCTTCCBSSSSCBCTTSCBHHH
T ss_pred HHHHHHHHHh--cCcceEEEEEecccCCCCccccHh-HHHHHHHHhccCCccccccchhhccCeeccccCcccCCccHHH
Confidence 9999999998 467899999999999999998887 3433 3678999987 68999999
Q ss_pred --hhhhhccccC-CCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCCCcEEecCCCCccccc-cccCC
Q 015441 275 --IEQGLTGFAS-SKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHEEFVKLLEKGVVPRTH-NVRGS 350 (406)
Q Consensus 275 --i~~~l~~i~~-~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~~fV~v~~~~~~P~~~-~v~g~ 350 (406)
+++.+.++++ ...+|+|||+|||++|||++++|++|+++++.|||+++|+++ |||++.+.+.+|+|+ ++.|+
T Consensus 216 ~k~~~~~~kil~~~~~~v~~~~~rVP~~~g~~~~~~~~l~~~~t~eei~~~~~~~----~~V~v~~~~~~p~~~~~v~g~ 291 (340)
T 2hjs_A 216 RRIFAEVQALLGERIGPLNVTCIQAPVFFGDSLSVTLQCAEPVDLAAVTRVLDAT----KGIEWVGEGDYPTVVGDALGQ 291 (340)
T ss_dssp HHHHHHHHHHTGGGBCCEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHHHS----TTEEECCTTCCCCCCCCCTTS
T ss_pred HHHHHHHHHHhCCCCCcEEEEeEEcCcCceEEEEEEEEECCCCCHHHHHHHHhcC----CCcEEeCCCCCCccHHHcCCC
Confidence 9999988875 567899999999999999999999999999999999999974 999999876799999 99999
Q ss_pred CcEEEEEEEeC--cCCeEEEEEEehhhhHhHHHHHHHHHHHHhCC
Q 015441 351 NYCLMNVFPDR--IPGRAIIISVIDNLVKGASGQALQNLNIMLGF 393 (406)
Q Consensus 351 n~~~v~~~~~~--~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~~g~ 393 (406)
|.|+|||++++ .++++.+|+++|||+||||+|||||||+|+|.
T Consensus 292 ~~~~vgr~r~~~~~~~~l~~~~~~DNl~kGAA~~avq~~~l~~~~ 336 (340)
T 2hjs_A 292 DETYVGRVRAGQADPCQVNLWIVSDNVRKGAALNAVLLGELLIKH 336 (340)
T ss_dssp SCEEEEEEEECSSCTTEEEEEEEECCCCCCCHHHHHHHHHHHHHH
T ss_pred CEEEEEEEEecCCCCCEEEEEEEechHHHHHHHHHHHHHHHHHHh
Confidence 99999999987 56899999999999999999999999999873
No 17
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=100.00 E-value=2.7e-67 Score=522.88 Aligned_cols=296 Identities=24% Similarity=0.314 Sum_probs=254.2
Q ss_pred cEEEEECcccHHHHHHHHHHH--cCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 64 VRIGLLGASGYTGAEIVRLLA--NHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~--~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
+||+|+||||++|++|+|+|. +||..+++.+.++++.|+++.. .+.++. +...++++| ++|+||+|+|++.
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~~-----~g~~i~-v~~~~~~~~-~~DvV~~a~g~~~ 73 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLAF-----RGEEIP-VEPLPEGPL-PVDLVLASAGGGI 73 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEEE-----TTEEEE-EEECCSSCC-CCSEEEECSHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEEE-----cCceEE-EEeCChhhc-CCCEEEECCCccc
Confidence 489999999999999999998 8999999988888888887662 232332 222234468 9999999999999
Q ss_pred hHHHHhhC-CCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchhhccC-CcEEecCCChHHHHHHHH
Q 015441 142 TQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKN-ARLVANPGCYPTSIQLPL 219 (406)
Q Consensus 142 s~~~~~~l-~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~~i~~-~~iVanPgC~tta~~l~L 219 (406)
++++++.+ ++|++|||+|++|||+++ +.|++||+|+++|++ +++|||||||||+++++|
T Consensus 74 s~~~a~~~~~~G~~vId~s~~~R~~~~-------------------~~~~vpevN~~~i~~~~~iIanp~C~tt~~~~~l 134 (331)
T 2yv3_A 74 SRAKALVWAEGGALVVDNSSAWRYEPW-------------------VPLVVPEVNREKIFQHRGIIANPNCTTAILAMAL 134 (331)
T ss_dssp HHHHHHHHHHTTCEEEECSSSSTTCTT-------------------SCBCCTTSCGGGGGGCSSEEECCCHHHHHHHHHH
T ss_pred hHHHHHHHHHCCCEEEECCCccccCCC-------------------CCEEEcCcCHHHhcCCCCEEECCCHHHHHHHHHH
Confidence 99999875 789999999999999862 248888999999887 689999999999999999
Q ss_pred HHHHHccCCCcceEEEEEeeccCccCcchhhcccHHHH------------------hcCccccc--CCcccchhh---hh
Q 015441 220 VPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLYSEI------------------AEGIYSYG--VTRHRHVPE---IE 276 (406)
Q Consensus 220 ~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~~e~------------------~~ni~py~--~~~h~h~pE---i~ 276 (406)
+||+++ +++++++|+|+||+||+|++++++ ++.|+ +.|+.|+. ...|+|.|| |+
T Consensus 135 ~pL~~~--~~I~~~~vtt~~~~SgaG~~~~~~-l~~q~~~~~~~~~~~~~~~~~~~a~niiP~~~~~~~~~ht~e~~~i~ 211 (331)
T 2yv3_A 135 WPLHRA--FQAKRVIVATYQAASGAGAKAMEE-LLTETHRFLHGEAPKAEAFAHPLPFNVIPHIDAFQENGYTREEMKVV 211 (331)
T ss_dssp HHHHHH--HCEEEEEEEEEBCGGGGCHHHHHH-HHHHHHHHHTSSCCCCCSSSSCCTTCCBSCCSCBCTTSCBHHHHHHH
T ss_pred HHHHHh--CCceEEEEEEEeecccCCcchhHH-HHHHHHhhhcCccccccccchhhhcCcccccCccccCCCcHHHHHHH
Confidence 999998 467899999999999999999986 44433 24555654 236889999 98
Q ss_pred hhhccccC-CCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCCCcEEecCC---CCccccccccCCCc
Q 015441 277 QGLTGFAS-SKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHEEFVKLLEK---GVVPRTHNVRGSNY 352 (406)
Q Consensus 277 ~~l~~i~~-~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~~fV~v~~~---~~~P~~~~v~g~n~ 352 (406)
+++.++++ +.++|+|||+|||++|||+.++|++++++++.+|++++|+++ +||++.++ +.+|+|+++.|+|+
T Consensus 212 ~e~~kil~~~~l~v~~~~~rVP~~~g~~~~~~~~l~~~~t~eei~~~~~~~----~~v~v~~~~~~~~~p~~~~~~g~~~ 287 (331)
T 2yv3_A 212 WETHKIFGDDTIRISATAVRVPTLRAHAEAVSVEFARPVTPEAAREVLKEA----PGVEVVDEPEAKRYPMPLTASGKWD 287 (331)
T ss_dssp HHHHHHTTCTTCEEEEECCBCSCSSEEEEEEEEEESSCCCHHHHHHHHTTS----TTCCBCCBTTTTBCCCHHHHTTCSS
T ss_pred HHHHHHhCCCCceEEEEEEEeccCceEEEEEEEEECCCCCHHHHHHHHHcC----CCeEEEeCCCcCCCCChhhccCCce
Confidence 88988874 778999999999999999999999999999999999999874 99999864 46999999999999
Q ss_pred EEEEEEEeC--cCCeEEEEEEehhhhHhHHHHHHHHHHHHhC
Q 015441 353 CLMNVFPDR--IPGRAIIISVIDNLVKGASGQALQNLNIMLG 392 (406)
Q Consensus 353 ~~v~~~~~~--~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~~g 392 (406)
|+|||++.+ .++++.+|+++|||+||||||||||||+|++
T Consensus 288 ~~igr~~~d~~~~~~l~~~~~~DNl~kGAAg~AVq~~nl~~~ 329 (331)
T 2yv3_A 288 VEVGRIRKSLAFENGLDFFVVGDQLLKGAALNAVQIAEEWLK 329 (331)
T ss_dssp EEEEEEEECSSSTTEEEEEEEEETTHHHHTTHHHHHHHHHC-
T ss_pred EEEEEEEECCCCCCEEEEEEEechHHHHHHHHHHHHHHHHhh
Confidence 999988765 5689999999999999999999999999986
No 18
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=100.00 E-value=1.5e-62 Score=494.66 Aligned_cols=298 Identities=15% Similarity=0.188 Sum_probs=252.1
Q ss_pred ccEEEEECcccHHHHHHHH-HHHcC--CCceEEEEeccCcCCccccccccCccccCCCccccc-CcccCCCCCEEEEcCC
Q 015441 63 QVRIGLLGASGYTGAEIVR-LLANH--PYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAV-KDADFSNVDAVFCCLP 138 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlr-lL~~h--p~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~-~~~~~~~vDvVF~al~ 138 (406)
|+||||+||||++|++|+| +|.+| |.+++..+.++ ++|+++.. +.+.++. +... ++++|.++|+||+|+|
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~-s~G~~v~~----~~g~~i~-~~~~~~~~~~~~~DvVf~a~g 74 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS-QLGQAAPS----FGGTTGT-LQDAFDLEALKALDIIVTCQG 74 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-STTSBCCG----GGTCCCB-CEETTCHHHHHTCSEEEECSC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeC-CCCCCccc----cCCCceE-EEecCChHHhcCCCEEEECCC
Confidence 4799999999999999999 78776 56889888876 68987642 3333443 2233 2345778999999999
Q ss_pred CcchHHHHhhC-CCCC--EEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchhhccCC-----cEEecCCC
Q 015441 139 HGTTQEIIKGL-PKSL--KIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNA-----RLVANPGC 210 (406)
Q Consensus 139 ~~~s~~~~~~l-~~G~--~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~~i~~~-----~iVanPgC 210 (406)
++.++++++.+ ++|+ +|||+|++|||++ + +.|++||+|++++++. ++|+||||
T Consensus 75 ~~~s~~~a~~~~~~G~k~vVID~ss~~R~~~--------~-----------~~~~vpevN~~~i~~~~~~g~~~Ianp~C 135 (367)
T 1t4b_A 75 GDYTNEIYPKLRESGWQGYWIDAASSLRMKD--------D-----------AIIILDPVNQDVITDGLNNGIRTFVGGNC 135 (367)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECSSTTTTCT--------T-----------EEEECHHHHHHHHHHHHHTTCCEEEECCH
T ss_pred chhHHHHHHHHHHCCCCEEEEcCChhhccCC--------C-----------CcEEeCCcCHHHHhhhhhcCCCEEEeCCH
Confidence 99999999876 7786 8999999999987 2 2467777777777643 79999999
Q ss_pred hHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhcc--------------------------------------
Q 015441 211 YPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEAN-------------------------------------- 252 (406)
Q Consensus 211 ~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~-------------------------------------- 252 (406)
|||+++++|+||++.+ ++++++|+||||+||+|+++++++
T Consensus 136 ttt~~~~al~pL~~~~--~I~~~~vtt~~a~SGaG~~~~~el~~~~~~l~~~~~~~~~~~~~~ild~~r~~~~~~~~~~~ 213 (367)
T 1t4b_A 136 TVSLMLMSLGGLFAND--LVDWVSVATYQAASGGGARHMRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTRSGEL 213 (367)
T ss_dssp HHHHHHHHHHHHHHTT--CEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHTHHHHTCTTCCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHcC--CCcEEEEEEEeccccccccchHHHHHHHhhhhccccccccccccchhhhhhccccccccccC
Confidence 9999999999999984 678999999999999999876531
Q ss_pred ---cH-HHHhcCcccccCC--cccchhh---hhhhhccccC--CCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHH
Q 015441 253 ---LY-SEIAEGIYSYGVT--RHRHVPE---IEQGLTGFAS--SKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQ 321 (406)
Q Consensus 253 ---~~-~e~~~ni~py~~~--~h~h~pE---i~~~l~~i~~--~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~ 321 (406)
+| .+++.|++||..+ .|+|.|| +++.+.++++ +.++|+|||||||++|||++++|++++++++.+||++
T Consensus 214 ~~~~f~~~~a~NiiP~~~~~~~~~~t~EE~k~~~e~~kil~~~~~~~v~~t~vrVPv~~g~~~~v~v~l~~~~t~eei~~ 293 (367)
T 1t4b_A 214 PVDNFGVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQAFTIKLKKDVSIPTVEE 293 (367)
T ss_dssp CCTTTSSCCTTCEESCCSCBCTTSCBHHHHHHHHHHHHHHTCSSCCCEEEECCEESCSSEEEEEEEEEESSCCCHHHHHH
T ss_pred cccccchhhhCceEEEecCccccCccHHHHHHHHHHHHHhCcCCCceEEEEEEEcCccceEEEEEEEEECCCCCHHHHHH
Confidence 11 3457899999875 7999999 8888888886 6789999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEecCCC-----CccccccccCCCcEEEEEEEeC--cCCeEEEEEEehhhhHhHHHHHHHHHHHH
Q 015441 322 QLKISYEHEEFVKLLEKG-----VVPRTHNVRGSNYCLMNVFPDR--IPGRAIIISVIDNLVKGASGQALQNLNIM 390 (406)
Q Consensus 322 ~l~~~y~~~~fV~v~~~~-----~~P~~~~v~g~n~~~v~~~~~~--~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~ 390 (406)
+|++++ +||++.+++ .+|+|+++.|+|.|+|||++.+ .++++.+|+++|||+||||||....++++
T Consensus 294 ~l~~~~---~~V~v~~~~~~~~~~~p~~~~v~g~~~~~Vgrir~d~~~~~~l~~~~~~DNL~kGAAg~~~~~~~~~ 366 (367)
T 1t4b_A 294 LLAAHN---PWAKVVPNDREITMRELTPAAVTGTLTTPVGRLRKLNMGPEFLSAFTVGDQLLWGAAEPLRRMLRQL 366 (367)
T ss_dssp HHHHHC---TTCCBCCSCHHHHHHHSSHHHHTTSSCCCEEEEEECTTCTTEEEEEEEEETTCCCCCHHHHHHHHHH
T ss_pred HHHhcC---CCEEEecCCcccccCCCcceeeCCCCeEEEEEEEEcCCCCCEEEEEEEccchhhchhHHHHHHHHhh
Confidence 999985 899998863 4899999999999999988765 46899999999999999999999998876
No 19
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=100.00 E-value=4.6e-42 Score=341.01 Aligned_cols=289 Identities=13% Similarity=0.138 Sum_probs=221.2
Q ss_pred ccEEEEECcccHHHHHHHHHHHcC--CCceEEEEe-------------ccCcCCccccccc---cC---ccccCCCcccc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANH--PYFGIKLMT-------------ADRKAGQSIGSVF---PH---LISQDLPTMVA 121 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~h--p~~elv~l~-------------s~~~~G~~i~~v~---p~---l~~~~~~~~~~ 121 (406)
|+||||+|+ |++|++++|+|.+| |++|+++++ +++..|+....++ +. +.+..+..+..
T Consensus 1 ~ikVgInG~-G~IGr~llR~l~~~~~p~~eivaInd~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~~ 79 (337)
T 1rm4_O 1 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSD 79 (337)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECC
T ss_pred CeEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEEEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEec
Confidence 479999998 99999999999998 999999998 6677787666555 42 33433333333
Q ss_pred cCcc--cCC--CCCEEEEcCCCcchHHHHhh-CCCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccch
Q 015441 122 VKDA--DFS--NVDAVFCCLPHGTTQEIIKG-LPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISR 196 (406)
Q Consensus 122 ~~~~--~~~--~vDvVF~al~~~~s~~~~~~-l~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~ 196 (406)
.++. +|. ++|+||+|+|++.+++.++. +++|+++||+|++|| ++ .|.. +|| +|+
T Consensus 80 ~dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r-~d---------~p~~--------V~G---VN~ 138 (337)
T 1rm4_O 80 RNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGK-GD---------IPTY--------VVG---VNE 138 (337)
T ss_dssp SCGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCB-SS---------CCBC--------CTT---TTG
T ss_pred CChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECCccc-CC---------CCeE--------eec---CCH
Confidence 2333 355 89999999999999999986 488999999999999 43 3444 444 345
Q ss_pred hhcc-CCcEEecCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhcccH-----HHHhcCcccccCCcc-
Q 015441 197 EDIK-NARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLY-----SEIAEGIYSYGVTRH- 269 (406)
Q Consensus 197 ~~i~-~~~iVanPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~-----~e~~~ni~py~~~~h- 269 (406)
++++ ++++|||||||||+++++|+||+++ ++|+++.|+|+|++||+ |+..+.+|+ +++++|++||+.+.|
T Consensus 139 ~~~~~~~~IIsNasCtTn~lap~lk~L~~~--fgI~~~~mtTvha~Tga-q~l~d~~~~~~r~~r~~a~NiiP~~tgaak 215 (337)
T 1rm4_O 139 EGYTHADTIISNASCTTNCLAPFVKVLDQK--FGIIKGTMTTTHSYTGD-QRLLDASHRDLRRARAACLNIVPTSTGAAK 215 (337)
T ss_dssp GGCCTTCSEEECCCHHHHHHHHHHHHHHHH--HCEEEEEEEEEEECCTT-SCSSSCCCSSTTTTSCTTTCCEEECCCHHH
T ss_pred HHhCCCCeEEECCChHHHHHHHHHHHHHHh--cCeeEEEEEEEEecCCc-cchhhcchhhhccchhhhcCcccccchhhH
Confidence 5666 4789999999999999999999998 68999999999999999 888888765 577899999999988
Q ss_pred ---cchhhhhhhhccccCCCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCC--CcEEecCCCCcccc
Q 015441 270 ---RHVPEIEQGLTGFASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHE--EFVKLLEKGVVPRT 344 (406)
Q Consensus 270 ---~h~pEi~~~l~~i~~~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~--~fV~v~~~~~~P~~ 344 (406)
+|+||+++ +++++|+|||+++||+.+++++++++++.|||+++|+++|++. -.+.+.+++ .-+
T Consensus 216 av~kvlPel~g----------kl~~~a~RVP~~~gs~~dl~~~l~k~~t~eei~~~lk~a~~~~lkgil~y~~~~-~vs- 283 (337)
T 1rm4_O 216 AVALVLPNLKG----------KLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEP-LVS- 283 (337)
T ss_dssp HHHHHCGGGTT----------TEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTTEEEECSC-CCG-
T ss_pred HHHhhhhhhcC----------cEEEEEEEecCCCEEEEEEEEEECCCCCHHHHHHHHHHHhhCCcCceecCcCCC-eee-
Confidence 77888866 5899999999999999999999999999999999999998653 245555432 111
Q ss_pred ccccCCCcEEE-----EEEEeCcCCeEEEEEEehhhhHhHHHHHHHHHHHHh
Q 015441 345 HNVRGSNYCLM-----NVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIML 391 (406)
Q Consensus 345 ~~v~g~n~~~v-----~~~~~~~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~~ 391 (406)
.+-.|..+-.| ++.. ..+-+-+++--|| -.|=+-+-+..+..|.
T Consensus 284 ~d~~~~~~s~i~d~~~~~~~--~~~~~k~~~wydn-e~gys~r~~d~~~~~~ 332 (337)
T 1rm4_O 284 IDFRCTDVSSTIDSSLTMVM--GDDMVKVIAWYDN-EWGYSQRVVDLADIVA 332 (337)
T ss_dssp GGGTTCCSSEEEEGGGCEEE--TTTEEEEEEEECT-THHHHHHHHHHHHHHH
T ss_pred cccCCCCcccccchhcccee--cCCEEEEEEEECC-CccchhhHHHHHHHHh
Confidence 12233322111 0111 1233458888999 5677777777777663
No 20
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=100.00 E-value=2.1e-42 Score=343.25 Aligned_cols=290 Identities=15% Similarity=0.144 Sum_probs=220.4
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCc-----cccccccCcccc------CC-------CcccccCc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQ-----SIGSVFPHLISQ------DL-------PTMVAVKD 124 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~-----~i~~v~p~l~~~------~~-------~~~~~~~~ 124 (406)
|+||||+| +||+|++++|+|.+||++|++++++....+. +++++|++|.+. .+ ..+...++
T Consensus 1 ~ikVgI~G-~G~iG~~l~R~l~~~~~veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp 79 (330)
T 1gad_O 1 TIKVGING-FGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDP 79 (330)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred CeEEEEEC-cCHHHHHHHHHHHcCCCeEEEEEcCCCChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEEEEEcCCh
Confidence 57999999 6999999999999999999999998766665 788999988541 11 11222223
Q ss_pred cc--C--CCCCEEEEcCCCcchHHHHhhC-CCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchhhc
Q 015441 125 AD--F--SNVDAVFCCLPHGTTQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDI 199 (406)
Q Consensus 125 ~~--~--~~vDvVF~al~~~~s~~~~~~l-~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~~i 199 (406)
+. | .++|+||+|+|++.+++.++.+ ++|+++||+|++| ++ +.| .++|| +|++++
T Consensus 80 ~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~--~~--------~~p--------~~V~G---vN~~~~ 138 (330)
T 1gad_O 80 ANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPS--KD--------NTP--------MFVKG---ANFDKY 138 (330)
T ss_dssp GGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC--SS--------SCC--------BCCTT---TTGGGC
T ss_pred hhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCC--CC--------CCC--------eEeec---CCHHHh
Confidence 32 3 4899999999999999999874 8899999999999 33 233 34666 566778
Q ss_pred cCCcEEecCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhccc-----H-HHHhcCcccccCCcccchh
Q 015441 200 KNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANL-----Y-SEIAEGIYSYGVTRHRHVP 273 (406)
Q Consensus 200 ~~~~iVanPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~-----~-~e~~~ni~py~~~~h~h~p 273 (406)
+++++|||||||||+++++|+||+++ ++++++.|+|+|++||+ ++++++.+ + +++++|++||+. +|.+
T Consensus 139 ~~~~iIsNpsCtt~~lap~lkpL~~~--~gI~~~~~ttvha~Tg~-q~~vd~~~~~~~~~~r~~~~NiiP~~t---g~a~ 212 (330)
T 1gad_O 139 AGQDIVSNASCTTNCLAPLAKVINDN--FGIIEGLMTTVHATTAT-QKTVDGPSHKDWRGGRGASQNIIPSST---GAAK 212 (330)
T ss_dssp CSCSEEECCCHHHHHHHHHHHHHHHH--HCEEEEEEEEEECCCTT-SBSSSCCCSSCGGGGSBTTTCCEEEEC---CTTT
T ss_pred CCCCEEEcCChHHHHHHHHHHHHHHh--cCeeEEEEEEEEecccc-cccccccccCCCccccchhhCeEEcCC---Ccch
Confidence 87899999999999999999999998 57899999999999999 88887654 1 267889999985 4678
Q ss_pred hhhhhhccccCCCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCCCc---EEecCCCCccccccccCC
Q 015441 274 EIEQGLTGFASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHEEF---VKLLEKGVVPRTHNVRGS 350 (406)
Q Consensus 274 Ei~~~l~~i~~~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~~f---V~v~~~~~~P~~~~v~g~ 350 (406)
|+++.+..+.+ +++|+|+|||++|||+.+++++|+++++.|||+++|+++|++ ++ +.+.+++ .-. .+-.|.
T Consensus 213 ei~kvlpel~g---kl~~~a~rVP~~~g~~~~l~~~l~k~~t~eei~~~~k~a~~~-~l~gil~y~~~~-~vs-~d~~~~ 286 (330)
T 1gad_O 213 AVGKVLPELNG---KLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEG-EMKGVLGYTEDD-VVS-TDFNGE 286 (330)
T ss_dssp THHHHSGGGTT---SEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHT-TTTTTEEEECSC-CCG-GGGTTC
T ss_pred hHHHHHHHhcC---cEEEEEEEeccccEEEEEEEEEECCCCCHHHHHHHHHHHhcC-CCCCEEeeECCc-eee-eeECCC
Confidence 88887765543 699999999999999999999999999999999999999864 43 4444332 111 122333
Q ss_pred CcEEEEEEEeC------cCCeEEEEEEehhhhHhHHHHHHHHHHHH
Q 015441 351 NYCLMNVFPDR------IPGRAIIISVIDNLVKGASGQALQNLNIM 390 (406)
Q Consensus 351 n~~~v~~~~~~------~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~ 390 (406)
.+-.| .|. ..+-+-+++--|| -+|=+-+-+..+..|
T Consensus 287 ~~s~~---~d~~~~~~~~~~~~k~~~wydn-e~gys~r~~d~~~~~ 328 (330)
T 1gad_O 287 VCTSV---FDAKAGIALNDNFVKLVSWYDN-ETGYSNKVLDLIAHI 328 (330)
T ss_dssp CSSEE---EETTTCEEEETTEEEEEEEECT-THHHHHHHHHHHHHT
T ss_pred CcceE---EecccCeEecCCEEEEEEEECC-CchhhhHHHHHHHHh
Confidence 22111 121 1233457788899 556666666666554
No 21
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=100.00 E-value=7e-40 Score=327.17 Aligned_cols=291 Identities=13% Similarity=0.123 Sum_probs=217.5
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCceEEEEec-cCcCC---c--cccccccCcccc-------------CCCcccc
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTA-DRKAG---Q--SIGSVFPHLISQ-------------DLPTMVA 121 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s-~~~~G---~--~i~~v~p~l~~~-------------~~~~~~~ 121 (406)
.+|+||||+|+ |++|++|+|+|.+||++|++++++ ..+.+ . +++++||+|.+. ++..+..
T Consensus 15 ~~~ikVgI~G~-G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~ 93 (354)
T 3cps_A 15 YFQGTLGINGF-GRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQA 93 (354)
T ss_dssp ---CEEEEECC-SHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECC
T ss_pred CcceEEEEECC-CHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEec
Confidence 44689999998 999999999999999999999998 55554 1 477788887541 2222222
Q ss_pred cCcc--cC--CCCCEEEEcCCCcchHHHHhhC-CCCC--EEEEcCCcccCCCccchhhhcCCCCCCccchhhhhcccccc
Q 015441 122 VKDA--DF--SNVDAVFCCLPHGTTQEIIKGL-PKSL--KIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEI 194 (406)
Q Consensus 122 ~~~~--~~--~~vDvVF~al~~~~s~~~~~~l-~~G~--~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~ 194 (406)
.+++ .| .++|+||+|+|++.+++.++++ ++|+ +|||++++ + +.|. ++|| +
T Consensus 94 ~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~pad----d--------~~p~--------~V~G---V 150 (354)
T 3cps_A 94 KDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPK----D--------NVPM--------YVMG---V 150 (354)
T ss_dssp SCGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCS----S--------CCCB--------CCTT---T
T ss_pred CChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCCC----C--------CCCE--------EEec---c
Confidence 2333 34 5899999999999999999874 7888 89999985 2 2333 4555 6
Q ss_pred chhhccC--CcEEecCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhccc--------HHHHhcCcccc
Q 015441 195 SREDIKN--ARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANL--------YSEIAEGIYSY 264 (406)
Q Consensus 195 ~~~~i~~--~~iVanPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~--------~~e~~~ni~py 264 (406)
|+++++. .+||||||||||+++++|+||+++ ++|++..|+|+|++||+ ++++++++ .+++++|++||
T Consensus 151 N~~~~~~~~~~IISNpsCtTn~lap~lkpL~~~--~gI~~g~mtTvha~Tg~-q~~vd~~~~~~k~~r~~r~aa~NiiP~ 227 (354)
T 3cps_A 151 NNTEYDPSKFNVISNASCTTNCLAPLAKIINDK--FGIVEGLMTTVHSLTAN-QLTVDGPSKGGKDWRAGRCAGNNIIPA 227 (354)
T ss_dssp TGGGCCTTTCSEEECCCHHHHHHHHHHHHHHHH--TCEEEEEEEEEEECCTT-SCSSSCCCCC--CCGGGSCTTSCCEEE
T ss_pred CHHHhCcCCCcEEECCCcHHHHHHHHHHHHHHh--CCeeEEEEEEEeccccc-chhhhccchhccccccccchhccEEec
Confidence 7777775 789999999999999999999998 68899999999999999 88888765 34678899999
Q ss_pred cCCcccchhhhhhhhccccCCCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCCCc---EEecCCCCc
Q 015441 265 GVTRHRHVPEIEQGLTGFASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHEEF---VKLLEKGVV 341 (406)
Q Consensus 265 ~~~~h~h~pEi~~~l~~i~~~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~~f---V~v~~~~~~ 341 (406)
+.+ |.+|+++.|..+.+ +++|+|+|||++|||+.+++++|+++++.|||+++|+++|++ ++ +.+.+++ .
T Consensus 228 ~tG---~akei~kvlp~l~g---kl~~~a~rVP~~~gs~~dl~~~l~k~~t~eeI~~~~k~a~~~-~lkgil~y~~~~-~ 299 (354)
T 3cps_A 228 STG---AAKAVGKVIPALNG---KLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASNG-PMKGIMGYTSDD-V 299 (354)
T ss_dssp ECC---HHHHHHHHSGGGTT---TEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHT-TTTTTEEEECSC-C
T ss_pred CcC---HHHHHHHHHHhcCC---cEEEEEEEeccCCEEEEEEEEEECCCCCHHHHHHHHHHHhhC-CCCCccCccCCC-e
Confidence 876 57888887755433 499999999999999999999999999999999999999874 43 4444332 1
Q ss_pred cccccccCCCc-EEE----EEEEeCcCCeEEEEEEehhhhHhHHHHHHHHHHHH
Q 015441 342 PRTHNVRGSNY-CLM----NVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIM 390 (406)
Q Consensus 342 P~~~~v~g~n~-~~v----~~~~~~~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~ 390 (406)
-. .+-.|..+ +-+ ++..+ .+-+-+++--|| -+|=+-+-|..+..|
T Consensus 300 vs-~d~~~~~~s~~~d~~~~~~~~--~~~~k~~~wydn-e~gys~r~~d~~~~~ 349 (354)
T 3cps_A 300 VS-TDFIGCKYSSIFDKNACIALN--DSFVKLISWYDN-ESGYSNRLVDLAVYV 349 (354)
T ss_dssp CG-GGGTTCCCSEEEEGGGCEEEE--TTEEEEEEEECT-THHHHHHHHHHHHHH
T ss_pred ee-EEEcCCCcceEEecccCeEec--CCEEEEEEEECC-CcchHhHHHHHHHHH
Confidence 11 12233322 111 11111 234457888999 567777777777766
No 22
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=6.7e-40 Score=325.38 Aligned_cols=287 Identities=13% Similarity=0.147 Sum_probs=211.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcC--CCceEEEEeccCc---CCc--cccccccCcc-------------ccCCCcccccC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANH--PYFGIKLMTADRK---AGQ--SIGSVFPHLI-------------SQDLPTMVAVK 123 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~h--p~~elv~l~s~~~---~G~--~i~~v~p~l~-------------~~~~~~~~~~~ 123 (406)
+||||+|+ ||+|++|+|+|.+| |++|++++++..+ .+. +++++|++|. +.++......+
T Consensus 1 ~kVgI~G~-G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~d 79 (332)
T 1hdg_O 1 ARVAINGF-GRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD 79 (332)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred CEEEEEcc-CHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCC
Confidence 58999998 99999999999999 9999999988431 111 2345555542 22333222223
Q ss_pred ccc--CC--CCCEEEEcCCCcchHHHHhhC-CCCC--EEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccch
Q 015441 124 DAD--FS--NVDAVFCCLPHGTTQEIIKGL-PKSL--KIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISR 196 (406)
Q Consensus 124 ~~~--~~--~vDvVF~al~~~~s~~~~~~l-~~G~--~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~ 196 (406)
++. |. ++|+||+|+|++.+++.++.+ ++|+ +|||++++ + .| + +.+||+|+
T Consensus 80 p~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a~----d---------~p----~------~~V~eVN~ 136 (332)
T 1hdg_O 80 PSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAK----G---------ED----I------TVVIGCNE 136 (332)
T ss_dssp GGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB----S---------CS----E------ECCTTTTG
T ss_pred hHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCCC----C---------CC----c------eEEeccCH
Confidence 333 44 899999999999999999874 7888 99999986 2 22 1 34456788
Q ss_pred hhcc-CCcEEecCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhcc----cH-HHHhcCcccccCCccc
Q 015441 197 EDIK-NARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEAN----LY-SEIAEGIYSYGVTRHR 270 (406)
Q Consensus 197 ~~i~-~~~iVanPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~----~~-~e~~~ni~py~~~~h~ 270 (406)
++++ ++++|||||||||+++++|+||+++ ++|+++.|+|+|++||+++ ..|.+ ++ +++++|++||. |+
T Consensus 137 ~~i~~~~~iIsNpsCttn~lap~lkpL~~~--~gI~~~~~ttvha~Sg~q~-~~d~~~~~~~~~r~~a~NiiP~~---tg 210 (332)
T 1hdg_O 137 DQLKPEHTIISCASCTTNSIAPIVKVLHEK--FGIVSGMLTTVHSYTNDQR-VLDLPHKDLRRARAAAVNIIPTT---TG 210 (332)
T ss_dssp GGCCTTCCEEECCCHHHHHHHHHHHHHHHH--HCEEEEEEEEEEECCTTSB-SSSCCCSSTTTTSBGGGCCEEEC---CT
T ss_pred HHhCCCCcEEECCccHHHHHHHHHHHHHHh--cCeeEeEEEEEEeccchhh-hhcCcccccccchhHhhCccccc---CC
Confidence 8888 5899999999999999999999998 5789999999999999954 44532 22 36789999997 77
Q ss_pred chhhhhhhhccccCCCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCCCc---EEecCCCCccccccc
Q 015441 271 HVPEIEQGLTGFASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHEEF---VKLLEKGVVPRTHNV 347 (406)
Q Consensus 271 h~pEi~~~l~~i~~~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~~f---V~v~~~~~~P~~~~v 347 (406)
|.+|+++.|..+.+ +++|+|+|||++|||+.+++++|+++++.|||+++|+++|++ ++ +.+.+++ .-+ .+-
T Consensus 211 ~a~ei~kvLp~l~g---kl~~~a~rVP~~~g~l~~l~~~l~k~~t~eei~~~lk~a~~~-~l~gil~y~~~~-~vs-~d~ 284 (332)
T 1hdg_O 211 AAKAVALVVPEVKG---KLDGMAIRVPTPDGSITDLTVLVEKETTVEEVNAVMKEATEG-RLKGIIGYNDEP-IVS-SDI 284 (332)
T ss_dssp HHHHHHHHCGGGTT---TEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHTT-TTTTTEEEECSC-CCG-GGG
T ss_pred cccchhhhCccccC---CEEEEeEEccccCcEEEEEEEEECCCCCHHHHHHHHHHHhhc-ccCCcccccCCC-eee-eee
Confidence 89999888765533 699999999999999999999999999999999999999864 54 4444332 111 122
Q ss_pred cCCCcEEEEEEEeC------cCCeEEEEEEehhhhHhHHHHHHHHHHHH
Q 015441 348 RGSNYCLMNVFPDR------IPGRAIIISVIDNLVKGASGQALQNLNIM 390 (406)
Q Consensus 348 ~g~n~~~v~~~~~~------~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~ 390 (406)
.|..+-.| .|. ..+-+-+++--|| -+|=+-+-+..+..|
T Consensus 285 ~~~~~s~~---~d~~~~~~~~~~~~k~~~wydn-e~gys~r~~d~~~~~ 329 (332)
T 1hdg_O 285 IGTTFSGI---FDATITNVIGGKLVKVASWYDN-EYGYSNRVVDTLELL 329 (332)
T ss_dssp TTCCCSEE---EETTTCEEETTTEEEEEEEECT-THHHHHHHHHHHHHG
T ss_pred CCCCccce---eccccCeEecCCEEEEEEEeCC-CccchhHHHHHHHHH
Confidence 33322111 121 1234457888899 567777777776665
No 23
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=100.00 E-value=1e-39 Score=324.23 Aligned_cols=290 Identities=15% Similarity=0.152 Sum_probs=211.7
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC---C--ccccccccCc-------------cccCCCcccccCc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA---G--QSIGSVFPHL-------------ISQDLPTMVAVKD 124 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~---G--~~i~~v~p~l-------------~~~~~~~~~~~~~ 124 (406)
|+||||+|+ ||+|++|+|+|.+||+++++++++.... + .+++++|++| .+.++......++
T Consensus 1 mikVgI~G~-G~iGr~l~R~l~~~~~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp 79 (334)
T 3cmc_O 1 AVKVGINGF-GRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDP 79 (334)
T ss_dssp CEEEEEESC-SHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred CeEEEEECC-CHHHHHHHHHHhCCCCeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEEEEecCCh
Confidence 589999998 9999999999999999999999985211 1 1234555554 2233332222233
Q ss_pred c--cCC--CCCEEEEcCCCcchHHHHhhC-CCCC--EEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchh
Q 015441 125 A--DFS--NVDAVFCCLPHGTTQEIIKGL-PKSL--KIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISRE 197 (406)
Q Consensus 125 ~--~~~--~vDvVF~al~~~~s~~~~~~l-~~G~--~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~ 197 (406)
+ .|. ++|+||+|+|++.+++.++.+ ++|+ +|||++++ + +.|. .+||+|++
T Consensus 80 ~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~----d--------~~p~-----------~V~eVN~~ 136 (334)
T 3cmc_O 80 ENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAK----N--------EDIT-----------IVMGVNQD 136 (334)
T ss_dssp GGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB----S--------CSEE-----------CCTTTSGG
T ss_pred hhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCc----c--------CCCE-----------eccccCHH
Confidence 3 344 899999999999999999874 7888 89999986 2 1333 34566777
Q ss_pred hccC--CcEEecCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhccc----H-HHHhcCcccccCCccc
Q 015441 198 DIKN--ARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANL----Y-SEIAEGIYSYGVTRHR 270 (406)
Q Consensus 198 ~i~~--~~iVanPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~----~-~e~~~ni~py~~~~h~ 270 (406)
+++. +++|||||||||+++++|+||+++ ++|+++.|+|+|++||+++ ..+..| + +++++|++||. |.
T Consensus 137 ~i~~~~~~IIsNpsCttn~lap~lkpL~~~--~gI~~~~mtTvha~Sg~q~-~~d~~~~~~r~~r~~a~NiiP~~---tg 210 (334)
T 3cmc_O 137 KYDPKAHHVISNASCTTNCLAPFAKVLHEQ--FGIVRGMMTTVHSYTNDQR-ILDLPHKDLRRARAAAESIIPTT---TG 210 (334)
T ss_dssp GCCTTTCCEEECCCHHHHHHHHHHHHHHHH--HCEEEEEEEEEEECCTTSB-SSSCCCSSTTTTSBTTTCCEEEE---CS
T ss_pred HhCccCCeEEECCChHHHHHHHHHHHHHHh--cCceeeeEEEEEeccchhh-hccccccccccchhhhhCEEeec---cC
Confidence 7774 789999999999999999999998 6889999999999999954 455322 2 36778999997 55
Q ss_pred chhhhhhhhccccCCCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCCCc---EEecCCCCccccccc
Q 015441 271 HVPEIEQGLTGFASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHEEF---VKLLEKGVVPRTHNV 347 (406)
Q Consensus 271 h~pEi~~~l~~i~~~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~~f---V~v~~~~~~P~~~~v 347 (406)
|.+|+++.|..+.+ +++|+|+|||++|||+.+++++|+++++.|||+++|+++|++ ++ +.+.+++ .-. .+-
T Consensus 211 ~a~ei~kvlp~l~g---kl~~~a~rVP~~~gs~~~l~~~l~k~~t~eei~~~lk~a~~~-~l~gil~y~~~~-~vs-~d~ 284 (334)
T 3cmc_O 211 AAKAVALVLPELKG---KLNGMAMRVPTPNVSVVDLVAELEKEVTVEEVNAALKAAAEG-ELKGILAYSEEP-LVS-RDY 284 (334)
T ss_dssp HHHHHHHHCGGGTT---TEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHT-TTTTTEEEECSC-CCG-GGG
T ss_pred cccchhhhChhhcC---cEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHhhC-ccCCcccCCCCC-Eee-eee
Confidence 78999887755433 699999999999999999999999999999999999999864 54 4444332 111 122
Q ss_pred cCCCc-EEEE----EEEeCcCCeEEEEEEehhhhHhHHHHHHHHHHHHh
Q 015441 348 RGSNY-CLMN----VFPDRIPGRAIIISVIDNLVKGASGQALQNLNIML 391 (406)
Q Consensus 348 ~g~n~-~~v~----~~~~~~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~~ 391 (406)
.|..+ +-+- +.. ..+-+-+++--|| -+|=+-+-+..+..|.
T Consensus 285 ~~~~~s~~~d~~~~~~~--~~~~~k~~~wydn-e~gys~r~~d~~~~~~ 330 (334)
T 3cmc_O 285 NGSTVSSTIDALSTMVI--DGKMVKVVSWYDN-ETGYSHRVVDLAAYIA 330 (334)
T ss_dssp TTCCSSEEEEGGGCEEE--TTTEEEEEEEECT-THHHHHHHHHHHHHHH
T ss_pred CCCCccceeccccCeEe--cCCEEEEEEEeCC-CchhhhHHHHHHHHHH
Confidence 33322 2110 111 1234457888999 5677777777777663
No 24
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=100.00 E-value=3.4e-39 Score=321.11 Aligned_cols=292 Identities=13% Similarity=0.127 Sum_probs=214.3
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEecc-CcCCc-----cccccccCcccc-------------CCCccccc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTAD-RKAGQ-----SIGSVFPHLISQ-------------DLPTMVAV 122 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~-~~~G~-----~i~~v~p~l~~~-------------~~~~~~~~ 122 (406)
||+||||+|+ |++|++++|+|.+||++|+++++++ ...++ +++++|+.|.+. .+..+...
T Consensus 2 M~ikVgI~G~-G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~ 80 (335)
T 1u8f_O 2 GKVKVGVNGF-GRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQER 80 (335)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCS
T ss_pred CceEEEEEcc-CHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecC
Confidence 3579999995 9999999999999999999999984 44443 567888877531 11111111
Q ss_pred Cccc--C--CCCCEEEEcCCCcchHHHHhh-CCCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchh
Q 015441 123 KDAD--F--SNVDAVFCCLPHGTTQEIIKG-LPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISRE 197 (406)
Q Consensus 123 ~~~~--~--~~vDvVF~al~~~~s~~~~~~-l~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~ 197 (406)
++++ | .++|+||+|+|++.+++.+++ +++|+++||+|++- + +.| .++|| +|++
T Consensus 81 d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~---~--------~~p--------~~V~g---vN~~ 138 (335)
T 1u8f_O 81 DPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPS---A--------DAP--------MFVMG---VNHE 138 (335)
T ss_dssp SGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCC---S--------SSC--------BCCTT---TTGG
T ss_pred CHHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCC---C--------CCC--------eEEec---cCHH
Confidence 2222 4 489999999999999999986 48899999999982 1 223 34555 6777
Q ss_pred hcc-CCcEEecCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhccc-----H-HHHhcCcccccCCccc
Q 015441 198 DIK-NARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANL-----Y-SEIAEGIYSYGVTRHR 270 (406)
Q Consensus 198 ~i~-~~~iVanPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~-----~-~e~~~ni~py~~~~h~ 270 (406)
+++ ++++|||||||||+++++|+||+++ +++++..|+|+|++||+ ++++++++ + +++++|++||+.+
T Consensus 139 ~~~~~~~iIsnpsCtt~~l~~~lkpL~~~--~gI~~~~~tt~~a~Tg~-q~~vd~~~~~~~~~~r~~~~NiiP~~tg--- 212 (335)
T 1u8f_O 139 KYDNSLKIISNASCTTNCLAPLAKVIHDN--FGIVEGLMTTVHAITAT-QKTVDGPSGKLWRDGRGALQNIIPASTG--- 212 (335)
T ss_dssp GCCTTCSEEECCCHHHHHHHHHHHHHHHH--HCEEEEEEEEEEECCTT-SBSSSCCCTTCGGGGSBTTTCCEEEECC---
T ss_pred HhCCCCCEEECCChHHHHHHHHHHHHHHh--CCcceeEEEEEeccccC-ccccccccccccccchhhhcCceeccCC---
Confidence 787 4789999999999999999999998 57899999999999999 55666543 1 3677899999864
Q ss_pred chhhhhhhhccccCCCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCCCcE---EecCCCCccccccc
Q 015441 271 HVPEIEQGLTGFASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHEEFV---KLLEKGVVPRTHNV 347 (406)
Q Consensus 271 h~pEi~~~l~~i~~~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~~fV---~v~~~~~~P~~~~v 347 (406)
|.+|+++.|..+.+ +++|+|+|||++|||+.+++++|+++++.|||+++|+++|++ +|. .+.+++ .-+ .+-
T Consensus 213 ~a~ei~kvlpel~g---kl~~~a~rVP~~~g~~~~l~~~l~~~~t~eei~~~~~~a~~~-~~~~il~~~~~~-~vs-~d~ 286 (335)
T 1u8f_O 213 AAKAVGKVIPELNG---KLTGMAFRVPTANVSVVDLTCRLEKPAKYDDIKKVVKQASEG-PLKGILGYTEHQ-VVS-SDF 286 (335)
T ss_dssp TTTTHHHHSGGGTT---SEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHT-TTTTTEEEECSC-CCG-GGG
T ss_pred hhHHHHHHHHHhCC---cEEEEEEEeccCCEEEEEEEEEECCCCCHHHHHHHHHHHhhC-ccCcEEcccCCC-cce-eee
Confidence 56777776655433 699999999999999999999999999999999999999875 443 333321 111 122
Q ss_pred cCCC-cEEE----EEEEeCcCCeEEEEEEehhhhHhHHHHHHHHHHHHh
Q 015441 348 RGSN-YCLM----NVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIML 391 (406)
Q Consensus 348 ~g~n-~~~v----~~~~~~~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~~ 391 (406)
.|.. .+-+ ++..+ .+.+-+++--||. +|=+-+-+..+..|.
T Consensus 287 ~~~~~s~~~d~~~~~~~~--~~~~k~~~wydne-~gy~~r~~~~~~~~~ 332 (335)
T 1u8f_O 287 NSDTHSSTFDAGAGIALN--DHFVKLISWYDNE-FGYSNRVVDLMAHMA 332 (335)
T ss_dssp TTCCCSEEEETTTCEEEE--TTEEEEEEEECTT-HHHHHHHHHHHHHHH
T ss_pred cCCCCceEEeCCCCEEec--CCEEEEEEEEcCc-chhHhHHHHHHHHHh
Confidence 2222 1111 01111 3355688889994 577777777776664
No 25
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=100.00 E-value=2.9e-38 Score=314.50 Aligned_cols=295 Identities=14% Similarity=0.146 Sum_probs=203.9
Q ss_pred CccEEEEECcccHHHHHHHHHHHc---CCCceEEEEeccCc---CCc--cccccccCccc-------------cCCCccc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLAN---HPYFGIKLMTADRK---AGQ--SIGSVFPHLIS-------------QDLPTMV 120 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~---hp~~elv~l~s~~~---~G~--~i~~v~p~l~~-------------~~~~~~~ 120 (406)
|++||||+|+ |++|++++|+|.+ ||+++++++++... .+. +++++|++|.+ .++....
T Consensus 1 M~ikVgI~G~-G~iGr~l~r~l~~~~~~~~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~ 79 (339)
T 2x5j_O 1 MTVRVAINGF-GRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLH 79 (339)
T ss_dssp -CEEEEEECC-SHHHHHHHHHHHHTSGGGTEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEEC
T ss_pred CCeEEEEECc-CHHHHHHHHHHHcCCCCCCEEEEEEeCCCCHHHHHHHhcccccCCCCCceEEEcCCeeEECCEEEEEEe
Confidence 4589999997 9999999999998 99999999987521 111 23455555432 2222121
Q ss_pred ccCcc--cCC--CCCEEEEcCCCcchHHHHhh-CCCCCE--EEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccc
Q 015441 121 AVKDA--DFS--NVDAVFCCLPHGTTQEIIKG-LPKSLK--IVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTE 193 (406)
Q Consensus 121 ~~~~~--~~~--~vDvVF~al~~~~s~~~~~~-l~~G~~--VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE 193 (406)
..+++ .|. ++|+||+|+|++.+++.++. +++|++ |||++++| + .| + .++||
T Consensus 80 ~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~ad~---d---------~p----~---~~V~g--- 137 (339)
T 2x5j_O 80 ERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSN---D---------LD----A---TVVYG--- 137 (339)
T ss_dssp CSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCCT---T---------SS----E---ECCTT---
T ss_pred cCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccccC---C---------CC----c---eeecc---
Confidence 12222 343 89999999999999999876 477875 89999875 2 22 0 22444
Q ss_pred cchhhccC-CcEEecCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhcccH-----HHHhcCcccccCC
Q 015441 194 ISREDIKN-ARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLY-----SEIAEGIYSYGVT 267 (406)
Q Consensus 194 ~~~~~i~~-~~iVanPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~-----~e~~~ni~py~~~ 267 (406)
+|++++++ .++||||||+||+++++|+||+++ ++|++..|+|+|++||+++ ..+.+|. +++++|++||.
T Consensus 138 vN~~~~~~~~~iIsnpsCttn~lap~lkpL~~~--~gI~~~~~ttvha~Tg~q~-~~d~~~~d~r~~r~a~~NiiP~~-- 212 (339)
T 2x5j_O 138 VNQDQLRAEHRIVSNASCTTNCIIPVIKLLDDA--YGIESGTVTTIHSAMHDQQ-VIDAYHPDLRRTRAASQSIIPVD-- 212 (339)
T ss_dssp TSGGGCCTTCCEEECCCHHHHHHHHHHHHHHHH--HCEEEEEEEEEECCC------------CTTTTSCCCCCCEEEC--
T ss_pred cCHHHhcCCCCEEECCCcHHHHHHHHHHHHHHc--cCcceeeEEEEEecccccc-ccccccccccchhhHHhCccccc--
Confidence 67777776 789999999999999999999998 6889999999999999954 4565542 24578999997
Q ss_pred cccchhhhhhhhccccCCCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCCCcE---EecCCCCcccc
Q 015441 268 RHRHVPEIEQGLTGFASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHEEFV---KLLEKGVVPRT 344 (406)
Q Consensus 268 ~h~h~pEi~~~l~~i~~~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~~fV---~v~~~~~~P~~ 344 (406)
|.|.+|+++.|..+.+ +++++|+|||+++||+.++|++|+++++.|||+++|+++|++ +|. .+.+++ .-..
T Consensus 213 -tg~a~ei~kvlp~l~g---kl~~~a~rVP~~~g~~~~l~v~l~k~~t~eei~~~lk~a~~~-~l~gil~y~~~~-~vs~ 286 (339)
T 2x5j_O 213 -TKLAAGITRFFPQFND---RFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQG-AFHGIVDYTELP-LVSV 286 (339)
T ss_dssp -CCHHHHHHHHSGGGTT---SEEEEEEECSSCSCEEEEEEEEESSCCCHHHHHHHHHHHHHT-TTTTTEEEECSC-CCGG
T ss_pred -CChHHHHHHHHHHhcC---cEEEEEEEecccCcEEEEEEEEECCCCCHHHHHHHHHHHhhc-CCCcEEcccCCc-cccc
Confidence 4467888877754433 699999999999999999999999999999999999999864 443 333332 1111
Q ss_pred ccccCC-CcEEEEEEE--eCcCCeEEEEEEehhhhHhHHHHHHHHHHHHhC
Q 015441 345 HNVRGS-NYCLMNVFP--DRIPGRAIIISVIDNLVKGASGQALQNLNIMLG 392 (406)
Q Consensus 345 ~~v~g~-n~~~v~~~~--~~~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~~g 392 (406)
+-.|. ..+-+-... --..+-+-+++--|| -+|=+-+-+..+..|..
T Consensus 287 -d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydn-e~gys~r~~d~~~~~~~ 335 (339)
T 2x5j_O 287 -DFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDN-EWGFANRMLDTTLAMAT 335 (339)
T ss_dssp -GGTTCCSSEEEEEEEEEEETTTEEEEEEEECH-HHHHHHHHHHHHHHHHC
T ss_pred -ccCCCCCceEEEcccceeccCCEEEEEEEeCC-CcccHhHHHHHHHHHhh
Confidence 22233 222221111 112344558888999 56777777777777643
No 26
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=100.00 E-value=1.6e-37 Score=309.04 Aligned_cols=289 Identities=11% Similarity=0.156 Sum_probs=211.8
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEecc-CcC---Cc--cccccccCcc-cc--------------CCCccc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTAD-RKA---GQ--SIGSVFPHLI-SQ--------------DLPTMV 120 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~-~~~---G~--~i~~v~p~l~-~~--------------~~~~~~ 120 (406)
||+||||+|+ |++|++++|+|.+||++|++++++. .+. +. +++++|+.|. +. .+..+.
T Consensus 2 m~ikVgI~G~-GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~ 80 (337)
T 3e5r_O 2 GKIKIGINGF-GRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFG 80 (337)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEEC
T ss_pred CceEEEEECc-CHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEe
Confidence 3479999998 9999999999999999999999983 222 22 2377777765 21 111122
Q ss_pred ccCccc--C--CCCCEEEEcCCCcchHHHHhh-CCCCC--EEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccc
Q 015441 121 AVKDAD--F--SNVDAVFCCLPHGTTQEIIKG-LPKSL--KIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTE 193 (406)
Q Consensus 121 ~~~~~~--~--~~vDvVF~al~~~~s~~~~~~-l~~G~--~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE 193 (406)
..++++ | .++|+||+|+|++.+++.+++ +++|+ +|||++++ + .| .++||
T Consensus 81 ~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa~----d---------~p--------~~V~g--- 136 (337)
T 3e5r_O 81 IRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSK----D---------AP--------MFVCG--- 136 (337)
T ss_dssp CSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS----S---------SC--------BCCTT---
T ss_pred cCChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCCC----C---------CC--------EEEec---
Confidence 223333 3 489999999999999999976 47888 89998872 2 23 34565
Q ss_pred cchhhcc-CCcEEecCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhcccH------HHHhcCcccccC
Q 015441 194 ISREDIK-NARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLY------SEIAEGIYSYGV 266 (406)
Q Consensus 194 ~~~~~i~-~~~iVanPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~------~e~~~ni~py~~ 266 (406)
+|+++++ ++++|||||||||+++++|+||+++ ++|++..|+|+|++||+ +++++..+. +++++|++||+.
T Consensus 137 vN~~~~~~~~~iIsnpsCtt~~la~~lkpL~~~--~gI~~~~~ttvha~Tg~-q~~vd~~~~~~~~~~r~~~~NiiP~~t 213 (337)
T 3e5r_O 137 VNEDKYTSDIDIVSNASCTTNCLAPLAKVIHDN--FGIIEGLMTTVHAITAT-QKTVDGPSSKDWRGGRAASFNIIPSST 213 (337)
T ss_dssp TTGGGCCTTCCEEECCCHHHHHHHHHHHHHHHH--HCEEEEEEEEEEECCTT-SBSSSCCCTTCSGGGSBGGGSCEEEEC
T ss_pred cCHHHhCCCCcEEECCChHHHHHHHHHHHHHHh--cCccccceeEEEeeccc-cccccccccccccccccHhhCccccCC
Confidence 6777777 4789999999999999999999998 57899999999999998 777776542 356789999986
Q ss_pred CcccchhhhhhhhccccCCCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCCCcE---EecCCCCccc
Q 015441 267 TRHRHVPEIEQGLTGFASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHEEFV---KLLEKGVVPR 343 (406)
Q Consensus 267 ~~h~h~pEi~~~l~~i~~~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~~fV---~v~~~~~~P~ 343 (406)
+|.+|+++.|..+.+ +++|+|+|||++|||+.+++++|+++++.|||+++|+++|++ +|. .+.+++ .-.
T Consensus 214 ---g~a~ei~kvlpel~g---kl~~~a~rVP~~~g~~~~l~~~l~k~~t~eei~~~~~~a~~~-~l~gil~y~~~~-~vs 285 (337)
T 3e5r_O 214 ---GAAKAVGKVLPDLNG---KLTGMSFRVPTVDVSVVDLTVRIEKAASYDAIKSAIKSASEG-KLKGIIGYVEED-LVS 285 (337)
T ss_dssp ---CHHHHHHHHSGGGTT---TEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHT-TTTTTEEEECSC-CCG
T ss_pred ---CchHHHHHHHHHhCC---cEEEEEEEeccCCeEEEEEEEEECCCccHHHHHHHHHHHhhC-CCCCcccCCCCC-eee
Confidence 367888877755533 699999999999999999999999999999999999999864 443 333322 111
Q ss_pred cccccCCCcEEE-----EEEEeCcCCeEEEEEEehhhhHhHHHHHHHHHHHH
Q 015441 344 THNVRGSNYCLM-----NVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIM 390 (406)
Q Consensus 344 ~~~v~g~n~~~v-----~~~~~~~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~ 390 (406)
.+-.|..+-.| ++..+ .+-+-+++--|| -+|=+-+-+..+..|
T Consensus 286 -~d~~~~~~s~~~d~~~~~~~~--~~~~k~~~wydn-e~gys~r~~~~~~~~ 333 (337)
T 3e5r_O 286 -TDFVGDSRSSIFDAKAGIALN--DNFVKLVAWYDN-EWGYSNRVIDLIRHM 333 (337)
T ss_dssp -GGGTTCCCSEEEETTTCEEEE--TTEEEEEEEECT-THHHHHHHHHHHHHH
T ss_pred -eeecCCCCceEEecccCcEec--CCEEEEEEEeCC-CcchHhHHHHHHHHH
Confidence 12233322111 01111 233457888899 567677777766665
No 27
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=100.00 E-value=3.4e-37 Score=306.69 Aligned_cols=292 Identities=11% Similarity=0.113 Sum_probs=208.9
Q ss_pred CccEEEEECcccHHHHHHHHHHHcC--CCceEEEEecc-------------CcCCcccccccc---Cc--cccCCCcccc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANH--PYFGIKLMTAD-------------RKAGQSIGSVFP---HL--ISQDLPTMVA 121 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~h--p~~elv~l~s~-------------~~~G~~i~~v~p---~l--~~~~~~~~~~ 121 (406)
||+||||+|+ |++|++++|+|.+| |+++++++++. +..|+....++. .+ .+..+..+..
T Consensus 1 M~ikVgI~G~-G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~ 79 (339)
T 3b1j_A 1 MTIRVAINGF-GRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCD 79 (339)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECC
T ss_pred CceEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEEcCCeeeecCceEEEEec
Confidence 4689999998 99999999999999 99999999864 233433222211 11 1222222222
Q ss_pred cCcc--cCC--CCCEEEEcCCCcchHHHHhh-CCCCCE--EEEcCCcccCCCccchhhhcCCCCCCccchhhhhcccccc
Q 015441 122 VKDA--DFS--NVDAVFCCLPHGTTQEIIKG-LPKSLK--IVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEI 194 (406)
Q Consensus 122 ~~~~--~~~--~vDvVF~al~~~~s~~~~~~-l~~G~~--VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~ 194 (406)
.+++ .|. ++|+||+|+|++.+++.++. +++|++ |||++++ + +.| ..++|| +
T Consensus 80 ~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~----~--------~~p-------~~~V~g---V 137 (339)
T 3b1j_A 80 RNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGK----G--------EGV-------GTYVIG---V 137 (339)
T ss_dssp SCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCB----S--------SSC-------EECCTT---T
T ss_pred CChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCC----C--------CCC-------eeEEcc---c
Confidence 2222 353 89999999999999999976 478887 8999986 2 133 033455 5
Q ss_pred chhhccC--CcEEecCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhcccH-----HHHhcCcccccCC
Q 015441 195 SREDIKN--ARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLY-----SEIAEGIYSYGVT 267 (406)
Q Consensus 195 ~~~~i~~--~~iVanPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~-----~e~~~ni~py~~~ 267 (406)
|+++++. .++||||||+||+++++|+||+++ ++++++.++|+|++||+ +++++..|. +.++.|++||..+
T Consensus 138 N~~~~~~~~~~IISnasCtTn~lap~lk~L~~~--fgI~~~~~tTvha~Tg~-q~~vd~~~~d~r~~r~a~~NiiP~~tg 214 (339)
T 3b1j_A 138 NDSEYRHEDFAVISNASCTTNCLAPVAKVLHDN--FGIIKGTMTTTHSYTLD-QRILDASHRDLRRARAAAVNIVPTTTG 214 (339)
T ss_dssp TGGGCCTTTCSEEECCCHHHHHHHHHHHHHHHH--TCEEEEEEEEEEECCTT-SCSSSCCCSSTTTTSCTTSCCEEEECS
T ss_pred CHHHhCcCCCeEEECCcchhhHHHHHHHHHHHh--CCeeEEEEEEEEeecCC-chhcccchhhhhccccHHHceEcccCc
Confidence 7777764 689999999999999999999998 78999999999999999 778887653 2456899999988
Q ss_pred cccchhhhhhhhccccCCCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCCCcE---EecCCCCcccc
Q 015441 268 RHRHVPEIEQGLTGFASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHEEFV---KLLEKGVVPRT 344 (406)
Q Consensus 268 ~h~h~pEi~~~l~~i~~~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~~fV---~v~~~~~~P~~ 344 (406)
.|++++++...|. -+++++|+|||+++||+.+++++|+++++.|||+++|+++|. .+|. .+.+++ .-..
T Consensus 215 aakav~kVlpeL~------gkl~g~a~rVP~~~g~~~dl~v~l~k~~t~eeI~~~lk~a~~-~~l~gil~y~~~~-~vs~ 286 (339)
T 3b1j_A 215 AAKAVALVIPELK------GKLNGIALRVPTPNVSVVDLVVQVEKPTITEQVNEVLQKASQ-TTMKGIIKYSDLP-LVSS 286 (339)
T ss_dssp HHHHHHHHCGGGT------TTEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHH-STTBTTEEEECSC-CCGG
T ss_pred hHHHHHHHhHhhc------CcEEEEEEEeccCCEEEEEEEEEEcCcCCHHHHHHHHHHhhc-CCCCCccCccCCc-eeeh
Confidence 8877655544332 159999999999999999999999999999999999999975 3543 333322 1111
Q ss_pred ccccCCC-cEEEE----EEEeCcCCeEEEEEEehhhhHhHHHHHHHHHHHHh
Q 015441 345 HNVRGSN-YCLMN----VFPDRIPGRAIIISVIDNLVKGASGQALQNLNIML 391 (406)
Q Consensus 345 ~~v~g~n-~~~v~----~~~~~~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~~ 391 (406)
+-.|.. .+-+- +.. ..+-+-+++--|| -.|=+-+-+..+..|.
T Consensus 287 -d~~~~~~s~~~d~~~~~~~--~~~~~k~~~wydn-e~gys~r~~d~~~~~~ 334 (339)
T 3b1j_A 287 -DFRGTDESSIVDSSLTLVM--DGDLVKVIAWYDN-EWGYSQRVVDLAELAA 334 (339)
T ss_dssp -GGTTCCSSEEEEGGGCEEE--TTTEEEEEEEECT-THHHHHHHHHHHHHHH
T ss_pred -hcCCCCCceEEecccCcee--cCCEEEEEEEeCC-CcchHhHHHHHHHHHh
Confidence 223332 22221 111 1234458888999 5677777777777663
No 28
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=4.3e-38 Score=313.47 Aligned_cols=272 Identities=13% Similarity=0.181 Sum_probs=200.3
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccC------cCCccccccccCcccc-------CCCcccccCcccCCC
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADR------KAGQSIGSVFPHLISQ-------DLPTMVAVKDADFSN 129 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~------~~G~~i~~v~p~l~~~-------~~~~~~~~~~~~~~~ 129 (406)
|+||||+|+ |++|++++|+|.+||+++++++.+.. .+|+...++|+.+.+. ++. +....++.+.+
T Consensus 1 mikVgIiGa-G~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~-v~~~~~~~~~~ 78 (337)
T 1cf2_P 1 MKAVAINGY-GTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIE-VAGTVDDMLDE 78 (337)
T ss_dssp CEEEEEECC-STTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCC-CCEEHHHHHHT
T ss_pred CeEEEEEeE-CHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceE-EcCCHHHHhcC
Confidence 579999998 99999999999999999999998754 1233222455554321 111 11100122358
Q ss_pred CCEEEEcCCCcchHHHHhhC-CCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchhhccCCcEEecC
Q 015441 130 VDAVFCCLPHGTTQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANP 208 (406)
Q Consensus 130 vDvVF~al~~~~s~~~~~~l-~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~~i~~~~iVanP 208 (406)
+|+||+|+|++.++++++.+ ++|++|||++++ ++ ++. . +.++|| +|+++++++++|+||
T Consensus 79 vDvV~~atp~~~~~~~a~~~l~aG~~VId~sp~---~~--------d~~--~----~~~V~g---vN~e~~~~~~iIanp 138 (337)
T 1cf2_P 79 ADIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGE---KH--------EDI--G----LSFNSL---SNYEESYGKDYTRVV 138 (337)
T ss_dssp CSEEEECCSTTHHHHHHHHHHHHTCCEEECTTS---CH--------HHH--S----CEECHH---HHGGGGTTCSEEEEC
T ss_pred CCEEEECCCchhhHHHHHHHHHcCCEEEEecCC---CC--------ccC--C----CeEEee---eCHHHhcCCCEEEcC
Confidence 99999999999999999865 789999999998 22 110 0 133454 677778878999999
Q ss_pred CChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhcccHHHHhcCcccc--cCCcccchhhhhhhhccccCCC
Q 015441 209 GCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLYSEIAEGIYSY--GVTRHRHVPEIEQGLTGFASSK 286 (406)
Q Consensus 209 gC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~~e~~~ni~py--~~~~h~h~pEi~~~l~~i~~~~ 286 (406)
|||||+++++|+||+++ ++++++.++|+|++||.+..+ .++.+|+.|| +.+ |.|.+|+++.| ++
T Consensus 139 ~C~tt~l~~~l~pL~~~--~gI~~~~vtt~~a~s~p~~~~------~~~~~NiiP~~i~~~-~~~~~ei~kil-~l---- 204 (337)
T 1cf2_P 139 SCNTTGLCRTLKPLHDS--FGIKKVRAVIVRRGADPAQVS------KGPINAIIPNPPKLP-SHHGPDVKTVL-DI---- 204 (337)
T ss_dssp CHHHHHHHHHHHHHHHH--HCEEEEEEEEEEESSCTTCTT------CCCSSCCEESSSSSS-CTHHHHHHTTS-CC----
T ss_pred CcHHHHHHHHHHHHHHh--cCcceeEEEEEEEeecCCccc------cchhcCEEeccCCCC-CcchHHHHhhh-ee----
Confidence 99999999999999998 588999999999998843221 2567899999 455 45889999877 43
Q ss_pred ceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCCCcEEecCCC-Cccccccc------cCC---CcEEEE
Q 015441 287 VTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHEEFVKLLEKG-VVPRTHNV------RGS---NYCLMN 356 (406)
Q Consensus 287 ~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~~fV~v~~~~-~~P~~~~v------~g~---n~~~v~ 356 (406)
+|+|||+|||++|||+.++|++|+++++.+|++++|+++ +||++.++. ..|.+... .|- +...+.
T Consensus 205 -~v~~t~~rVPv~~g~~~~~~v~l~~~~t~eei~~~~~~~----~~v~v~~~~~~~~~~~~~~~~~~~~gr~r~d~~~~~ 279 (337)
T 1cf2_P 205 -NIDTMAVIVPTTLMHQHNVMVEVEETPTVDDIIDVFEDT----PRVILISAEDGLTSTAEIMEYAKELGRSRNDLFEIP 279 (337)
T ss_dssp -CEEEEEEEESCCSCEEEEEEEEESSCCCHHHHHHHHHHS----TTEEEECTTTTCCSHHHHHHHHHHHTCGGGCCCSEE
T ss_pred -EEEEEEEEcCccCeEEEEEEEEECCCCCHHHHHHHHHhC----CCcEEeccccCCCCCcchhhhhhhcCCCccCchhhe
Confidence 699999999999999999999999999999999999998 899998753 23444222 122 223333
Q ss_pred EEEeC---cCCeEEEEEEehhh
Q 015441 357 VFPDR---IPGRAIIISVIDNL 375 (406)
Q Consensus 357 ~~~~~---~~~~~~~~~v~DNL 375 (406)
+..+. ..+.+.++-++||-
T Consensus 280 ~w~~~~~~~~~~~~~~~~~~q~ 301 (337)
T 1cf2_P 280 VWRESITVVDNEIYYMQAVHQE 301 (337)
T ss_dssp EEGGGCEEETTEEEEEEEECTT
T ss_pred eehheeEEcCCEEEEEEecCCc
Confidence 33332 24567788888863
No 29
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=100.00 E-value=2.1e-36 Score=299.93 Aligned_cols=286 Identities=15% Similarity=0.157 Sum_probs=208.3
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEec-------------cCcCCcccccccc---Cc--cccCCCcccccCc-
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTA-------------DRKAGQSIGSVFP---HL--ISQDLPTMVAVKD- 124 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s-------------~~~~G~~i~~v~p---~l--~~~~~~~~~~~~~- 124 (406)
+||||+|+ |+||++++|+|.+| +++++++++ ++..|+-...+.. .+ .++++......++
T Consensus 1 ikVgInG~-G~IGr~vlr~l~~~-~~evvaind~~~~~~~a~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~ 78 (331)
T 2g82_O 1 MKVGINGF-GRIGRQVFRILHSR-GVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPK 78 (331)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHH-TCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGG
T ss_pred CEEEEECc-CHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhHhhhccccCCCCCceEEEcCCEEEECCEEEEEEecCChh
Confidence 48999997 99999999999988 999998775 3445642222221 11 2334432222233
Q ss_pred -ccCC--CCCEEEEcCCCcchHHHHhh-CCCCC--EEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchhh
Q 015441 125 -ADFS--NVDAVFCCLPHGTTQEIIKG-LPKSL--KIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISRED 198 (406)
Q Consensus 125 -~~~~--~vDvVF~al~~~~s~~~~~~-l~~G~--~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~~ 198 (406)
.+|. ++|+||+|+|++.+++.+++ +++|+ +|||++++ + +.|..+|| +|+++
T Consensus 79 ~l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~----d--------~~p~vV~g-----------VN~~~ 135 (331)
T 2g82_O 79 EIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAK----G--------EDITIVMG-----------VNHEA 135 (331)
T ss_dssp GSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB----S--------CSEECCTT-----------TTGGG
T ss_pred hCcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCc----C--------CCCEEeec-----------cCHHH
Confidence 3465 78999999999999999986 47888 89999886 2 24544544 55555
Q ss_pred ccC--CcEEecCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhcccH-----HHHhcCcccccCCcccc
Q 015441 199 IKN--ARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLY-----SEIAEGIYSYGVTRHRH 271 (406)
Q Consensus 199 i~~--~~iVanPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~-----~e~~~ni~py~~~~h~h 271 (406)
++. +++||||||+||+++++|+||+++ ++|+++.|+|+|++||+ ++..+.+|. ++++.|++||..+.|++
T Consensus 136 ~~~~~~~IIsnasCtTn~lap~lk~L~~~--fgI~~~~mtTvha~Tg~-q~~~d~~~~d~r~~r~~a~NiIP~~tGaaka 212 (331)
T 2g82_O 136 YDPSRHHIISNASCTTNSLAPVMKVLEEA--FGVEKALMTTVHSYTND-QRLLDLPHKDLRRARAAAINIIPTTTGAAKA 212 (331)
T ss_dssp CCTTTCCEEECCCHHHHHHHHHHHHHHHH--TCEEEEEEEEEEECCTT-SBSSSCCCSSTTTTSBGGGCCEEECCCHHHH
T ss_pred hCcCCCCEEECCChHHHHHHHHHHHHHHh--cCccEEEEEEEeecccc-cchhccccccccccchhhhCccccCCCchhh
Confidence 653 689999999999999999999998 68999999999999999 777886654 46788999999998888
Q ss_pred hhhhhhhhccccCCCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCCC---cEEecCCCCcccccccc
Q 015441 272 VPEIEQGLTGFASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHEE---FVKLLEKGVVPRTHNVR 348 (406)
Q Consensus 272 ~pEi~~~l~~i~~~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~~---fV~v~~~~~~P~~~~v~ 348 (406)
+++|...|. .+++++|+|||+++||+.+++++|+++++.|||+++|+++|++ + .+.+.+++ .-+ .+-.
T Consensus 213 v~kIlp~L~------gkl~g~a~RVPv~~gs~~dl~v~l~k~~t~eei~~~lk~a~~~-~l~gil~y~~~~-~vs-~d~~ 283 (331)
T 2g82_O 213 TALVLPSLK------GRFDGMALRVPTATGSISDITALLKREVTAEEVNAALKAAAEG-PLKGILAYTEDE-IVL-QDIV 283 (331)
T ss_dssp HTTTCGGGT------TSEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHT-TTTTTEEEECSC-CCG-GGGT
T ss_pred hhhhHHhcC------CCEEEEEEEeCCCCEEEEEEEEEECCCCCHHHHHHHHHHhhcC-ccCCccCCCCCC-eee-eeeC
Confidence 776655442 2699999999999999999999999999999999999999865 4 34444332 111 1223
Q ss_pred CCCcEEEEEEEeC-----cCCeEEEEEEehhhhHhHHHHHHHHHHHH
Q 015441 349 GSNYCLMNVFPDR-----IPGRAIIISVIDNLVKGASGQALQNLNIM 390 (406)
Q Consensus 349 g~n~~~v~~~~~~-----~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~ 390 (406)
|..+-.| .|. ..+-+-+++--|| -+|=+-+-+..+..|
T Consensus 284 ~~~~s~~---~d~~~~~~~~~~~k~~~wydn-e~gys~r~~d~~~~~ 326 (331)
T 2g82_O 284 MDPHSSI---VDAKLTKALGNMVKVFAWYDN-EWGYANRVADLVELV 326 (331)
T ss_dssp TCCCSEE---EEGGGCEEETTEEEEEEEECT-THHHHHHHHHHHHHH
T ss_pred CCCccce---ecchhccccCCEEEEEEEECC-CchhHHHHHHHHHHH
Confidence 3322111 111 1234457788899 567777777777665
No 30
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=100.00 E-value=1.8e-36 Score=304.56 Aligned_cols=290 Identities=11% Similarity=0.127 Sum_probs=211.9
Q ss_pred CccEEEEECcccHHHHHHHHHHHcC--CCceEEEEecc-------------CcCCccccccc---cCc--cccCCCcccc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANH--PYFGIKLMTAD-------------RKAGQSIGSVF---PHL--ISQDLPTMVA 121 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~h--p~~elv~l~s~-------------~~~G~~i~~v~---p~l--~~~~~~~~~~ 121 (406)
||+||||+|+ |+||++++|+|.+| |+++++++++. +..|+....++ +.+ .+..+..+..
T Consensus 1 M~ikVgInGf-GrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v~g~~i~v~~~ 79 (380)
T 2d2i_A 1 MTIRVAINGF-GRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCD 79 (380)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECC
T ss_pred CCcEEEEECc-CHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEEeCCeEEECCeEEEEEec
Confidence 4689999997 99999999999998 99999999874 23343222221 111 1222222222
Q ss_pred cCccc--CC--CCCEEEEcCCCcchHHHHhh-CCCCCE--EEEcCCcccCCCccchhhhcCCCCCCccchhhhhcccccc
Q 015441 122 VKDAD--FS--NVDAVFCCLPHGTTQEIIKG-LPKSLK--IVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEI 194 (406)
Q Consensus 122 ~~~~~--~~--~vDvVF~al~~~~s~~~~~~-l~~G~~--VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~ 194 (406)
.++++ |. ++|+||+|+|++.+++.++. +++|++ |||++++ + +.| ..++|| +
T Consensus 80 ~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~----d--------~~p-------~~~V~G---V 137 (380)
T 2d2i_A 80 RNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGK----A--------EGV-------GTYVIG---V 137 (380)
T ss_dssp SCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCB----S--------SSC-------EECCTT---T
T ss_pred CChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCC----C--------CCC-------ceEEcc---c
Confidence 23333 42 89999999999999999876 578876 8999986 2 133 033555 5
Q ss_pred chhhccC--CcEEecCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhcccH-----HHHhcCcccccCC
Q 015441 195 SREDIKN--ARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLY-----SEIAEGIYSYGVT 267 (406)
Q Consensus 195 ~~~~i~~--~~iVanPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~-----~e~~~ni~py~~~ 267 (406)
|+++++. .+|||||||+||+++++|+||+++ ++|+++.|+|+|++||+ ++.+|.+|. +.++.|++||..+
T Consensus 138 N~e~~~~~~~~IVSNasCtTn~lap~lk~L~d~--fgI~~g~mTTvha~Tg~-q~~vD~~~~d~r~gR~aa~NiIP~~Tg 214 (380)
T 2d2i_A 138 NDSEYRHEDFAVISNASCTTNCLAPVAKVLHDN--FGIIKGTMTTTHSYTLD-QRILDASHRDLRRARAAAVNIVPTTTG 214 (380)
T ss_dssp TGGGCCTTTCSEEECCCHHHHHHHHHHHHHHHH--HCEEEEEEEEEEECCTT-SCSSSCCCSSTTTTSCGGGCCEEEECC
T ss_pred CHHHhcccCCcEEECCchHHHHHHHHHHHHHHh--cCeeEEEEEEEeecccc-chhhccchhhhhhcchHhhCeEeccCc
Confidence 7777764 589999999999999999999998 68999999999999999 888887643 3457899999988
Q ss_pred ccc----chhhhhhhhccccCCCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCCCc---EEecCCCC
Q 015441 268 RHR----HVPEIEQGLTGFASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHEEF---VKLLEKGV 340 (406)
Q Consensus 268 ~h~----h~pEi~~~l~~i~~~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~~f---V~v~~~~~ 340 (406)
.|+ ++||+++ +++++++|||+++||+.+++++|+++++.|||+++|+++|++ +| +.+.+++
T Consensus 215 aakav~kvlPeL~g----------kl~g~avRVPt~~gs~~dlt~~l~k~~t~eeI~~~lk~a~~~-~lkgil~y~~~~- 282 (380)
T 2d2i_A 215 AAKAVALVIPELKG----------KLNGIALRVPTPNVSVVDLVVQVEKPTITEQVNEVLQKASQT-TMKGIIKYSDLP- 282 (380)
T ss_dssp HHHHHHHHCGGGTT----------TEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHT-TTTTTEEEECSC-
T ss_pred hHHHHHhhhHhhhC----------cEEEEEEEeccCCEEEEEEEEEECCcCCHHHHHHHHHHHhhC-CCCCccCCcCCC-
Confidence 766 7788865 589999999999999999999999999999999999999863 44 3444332
Q ss_pred ccccccccCCCcEEE-----EEEEeCcCCeEEEEEEehhhhHhHHHHHHHHHHHHhCC
Q 015441 341 VPRTHNVRGSNYCLM-----NVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGF 393 (406)
Q Consensus 341 ~P~~~~v~g~n~~~v-----~~~~~~~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~~g~ 393 (406)
.-. .+-.|..+-.| ++.. ..+-+-+++--|| -+|=+-+-|..+..|...
T Consensus 283 ~vS-~d~~~~~~ssi~d~~~~~~~--~~~~vk~~~wyDN-e~gys~r~~d~~~~~~~~ 336 (380)
T 2d2i_A 283 LVS-SDFRGTDESSIVDSSLTLVM--DGDLVKVIAWYDN-EWGYSQRVVDLAELAARK 336 (380)
T ss_dssp CCG-GGGTTCCCSEEEEGGGCEEE--TTTEEEEEEEECT-THHHHHHHHHHHHHHHTT
T ss_pred eee-eeeCCCCcceEEecccCcee--cCCEEEEEEEECC-CcchHhHHHHHHHHHHhh
Confidence 111 12233322111 0111 1234458888999 678888888888888664
No 31
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=100.00 E-value=1.9e-32 Score=269.88 Aligned_cols=291 Identities=15% Similarity=0.193 Sum_probs=207.5
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCC-----ccccccccCccc-------------cCCCccccc
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAG-----QSIGSVFPHLIS-------------QDLPTMVAV 122 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G-----~~i~~v~p~l~~-------------~~~~~~~~~ 122 (406)
.|++||+|+| .|+|||.++|.+.+++.+|++++++..+.. .+++++|..|.+ +.+..+++.
T Consensus 2 ~m~~kv~ING-fGrIGr~v~R~~~~~~~~~ivaind~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~inGk~I~v~~e~ 80 (338)
T 3lvf_P 2 SMAVKVAING-FGRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFSEP 80 (338)
T ss_dssp CCCEEEEEEC-CSHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCS
T ss_pred CccEEEEEEC-CCcHHHHHHHHHHHCCCceEEEEecCCCHHHHHHHhccCCCCCCcCCeEEEcCCEEEECCEEEEEEEec
Confidence 4678999999 999999999999988999999999732221 357778877752 233322222
Q ss_pred Cc--ccCC--CCCEEEEcCCCcchHHHHhh-CCCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchh
Q 015441 123 KD--ADFS--NVDAVFCCLPHGTTQEIIKG-LPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISRE 197 (406)
Q Consensus 123 ~~--~~~~--~vDvVF~al~~~~s~~~~~~-l~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~ 197 (406)
++ .+|. ++|+||+|+|.+.+++.+++ +++|++.|.+|++. ++ ++|+++|++|.+.. .
T Consensus 81 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps--~~--------d~p~vV~gVN~~~~-~------- 142 (338)
T 3lvf_P 81 DASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPA--TG--------DLKTIVFNTNHQEL-D------- 142 (338)
T ss_dssp CGGGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCC--BS--------SCEECCTTTTGGGC-C-------
T ss_pred ccccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCC--CC--------CCCEEeccCCHHHc-C-------
Confidence 22 3454 89999999999999999976 68888544456654 23 46888888887653 1
Q ss_pred hccCCcEEecCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhcccH-------HHHhcCcccccCCcc-
Q 015441 198 DIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLY-------SEIAEGIYSYGVTRH- 269 (406)
Q Consensus 198 ~i~~~~iVanPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~-------~e~~~ni~py~~~~h- 269 (406)
...+|||||+|+|++++++|+||+++ |+|+++.|+|+|++||.++ ..|..+. +.++.|++|...+.-
T Consensus 143 --~~~~IISNasCTTn~Lap~lkvL~d~--fGI~~g~mTTvha~T~~q~-~~D~~~~k~d~r~~r~aa~NiIP~~tGaak 217 (338)
T 3lvf_P 143 --GSETVVSGASCTTNSLAPVAKVLNDD--FGLVEGLMTTIHAYTGDQN-TQDAPHRKGDKRRARAAAENIIPNSTGAAK 217 (338)
T ss_dssp --SCCSEEECCCHHHHHHHHHHHHHHHH--HCEEEEEEEEEEECCTTSC-SSSCCCTTCCTTTTSCGGGCCEEEECSTTT
T ss_pred --ccCCeEecCchhhhhhHHHHHHHHHh--cCEEEEEEeeeccccchhh-hhcCCccccccccchhhhceEEeCCCchHH
Confidence 23689999999999999999999998 7999999999999999854 4553321 356789999876542
Q ss_pred ---cchhhhhhhhccccCCCceEEEEEEEeeecceeEEEEEEEeCC-CCCHHHHHHHHHHHcCCCCcEEecCCCCccccc
Q 015441 270 ---RHVPEIEQGLTGFASSKVTVSFTPHLMPMIRGMQSTIYVEMAP-GVTIEDLYQQLKISYEHEEFVKLLEKGVVPRTH 345 (406)
Q Consensus 270 ---~h~pEi~~~l~~i~~~~~~v~~t~~rVPv~rG~~~ti~v~l~~-~~s~eev~~~l~~~y~~~~fV~v~~~~~~P~~~ 345 (406)
+.+||+.. +++.+|+|||+++||+.+++++|++ +++.|||+++|+++.++. +.+.+++- -. .
T Consensus 218 av~kVlPeL~g----------kltg~avRVPv~~~s~~dlt~~lek~~~t~eei~~~lk~As~g~--l~yte~~~-VS-~ 283 (338)
T 3lvf_P 218 AIGKVIPEIDG----------KLDGGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMKNASNES--FGYTEDEI-VS-S 283 (338)
T ss_dssp TGGGTCGGGTT----------SEEEEEEEESCSSCEEEEEEEEESSSSCCHHHHHHHHHHTCCSS--EEEECSCC-CG-G
T ss_pred HHhhhchhhcC----------cEEEEEEEcCCCceEEEEEEEEEccCCCCHHHHHHHHHHhhcCC--cccccCCE-Ee-E
Confidence 34566543 6999999999999999999999999 999999999999986553 66665431 11 1
Q ss_pred cccCCCc-EEE----EEEEeC-cCCeEEEEEEehhhhHhHHHHHHHHHHHH
Q 015441 346 NVRGSNY-CLM----NVFPDR-IPGRAIIISVIDNLVKGASGQALQNLNIM 390 (406)
Q Consensus 346 ~v~g~n~-~~v----~~~~~~-~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~ 390 (406)
+-.|..+ +-+ +...+. ..+-+-+++--|| -.|=+-+-+..+..|
T Consensus 284 Df~~~~~ssi~d~~~t~~~~~~~~~~vk~~~WYDN-E~gys~r~~dl~~~~ 333 (338)
T 3lvf_P 284 DVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDN-EMSYTAQLVRTLAYL 333 (338)
T ss_dssp GGTTCCCSEEEEGGGCEEEEETTEEEEEEEEEECT-THHHHHHHHHHHHHH
T ss_pred eeCCCCcceEEecccceEecCCCCCEEEEEEEECC-ccchHHHHHHHHHHH
Confidence 2222221 111 111110 0122346777899 466666667666655
No 32
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=100.00 E-value=1.6e-32 Score=272.03 Aligned_cols=287 Identities=13% Similarity=0.126 Sum_probs=203.1
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEec-cCcCC-----ccccccccCccc-------------cCCCcccccC
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTA-DRKAG-----QSIGSVFPHLIS-------------QDLPTMVAVK 123 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s-~~~~G-----~~i~~v~p~l~~-------------~~~~~~~~~~ 123 (406)
.+||||+| +|+|||.++|++.++|++|++++++ ..+.. .+++++|..|.+ +.+..++..+
T Consensus 11 ~~kv~ING-fGrIGr~v~ra~~~~~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~~~v~~~~~~l~v~Gk~i~v~~~~d 89 (345)
T 2b4r_O 11 ATKLGING-FGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKD 89 (345)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSS
T ss_pred heEEEEeC-CchHHHHHHHHHhhCCCcEEEEEcCCCCChHHHHHHhccCCCCCcCCCCEEEcCCEEEECCEEEEEEEcCC
Confidence 36999999 9999999999999999999999997 22211 234556655532 2222222223
Q ss_pred cc--cCC--CCCEEEEcCCCcchHHHHhh-CCCCC--EEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccch
Q 015441 124 DA--DFS--NVDAVFCCLPHGTTQEIIKG-LPKSL--KIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISR 196 (406)
Q Consensus 124 ~~--~~~--~vDvVF~al~~~~s~~~~~~-l~~G~--~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~ 196 (406)
+. +|. ++|+||+|+|.+.+++.++. +++|+ +|||++++ + ++|+.+|++|.+. |.
T Consensus 90 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~----~--------dvplvV~gVN~~~-~~------ 150 (345)
T 2b4r_O 90 PSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPK----D--------DTPIYVMGINHHQ-YD------ 150 (345)
T ss_dssp GGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS----S--------SCCBCCTTTTGGG-CC------
T ss_pred cccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCC----C--------CCCEEEecCCHHH-hC------
Confidence 22 354 89999999999999999976 46776 58877664 3 3789999998874 32
Q ss_pred hhccCCcEEecCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhccc--------HHHHhcCcccccCCc
Q 015441 197 EDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANL--------YSEIAEGIYSYGVTR 268 (406)
Q Consensus 197 ~~i~~~~iVanPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~--------~~e~~~ni~py~~~~ 268 (406)
...+|||||+|+|++++++|+||+++ |+|+++.|+|+|++||+++ ..|..+ .++++.|++|+..+.
T Consensus 151 ---~~~~IISNasCTTn~Lap~lk~L~d~--fGI~~~~mTTvhA~T~~q~-~~d~~~~~~~d~r~~r~~a~NiIP~~tGa 224 (345)
T 2b4r_O 151 ---TKQLIVSNASCTTNCLAPLAKVINDR--FGIVEGLMTTVHASTANQL-VVDGPSKGGKDWRAGRCALSNIIPASTGA 224 (345)
T ss_dssp ---TTCCEEECCCHHHHHHHHHHHHHHHH--HCEEEEEEEEEECCCTTSC-SSSCCCGGGCCGGGGSCTTTCCEEEECCH
T ss_pred ---CCCCEEECCchHHHHHHHHHHHHHHh--cCeeEEEEEEeehhhchhh-hhcccccccCCCccccchhhccCcCCCch
Confidence 12579999999999999999999998 7999999999999999954 344332 135678889887553
Q ss_pred c----cchhhhhhhhccccCCCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCC--CcEEecCCCCcc
Q 015441 269 H----RHVPEIEQGLTGFASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHE--EFVKLLEKGVVP 342 (406)
Q Consensus 269 h----~h~pEi~~~l~~i~~~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~--~fV~v~~~~~~P 342 (406)
- +.+||+.. +++.+|+||||++||+.+++++|+++++.|||+++|+++.++. -.+.+.+++ .-
T Consensus 225 akav~kVlP~L~g----------kltg~avRVPv~~gs~~dltv~lek~~t~eei~~~lk~a~~~~lkgil~y~~~~-~V 293 (345)
T 2b4r_O 225 AKAVGKVLPELNG----------KLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDE-VV 293 (345)
T ss_dssp HHHHHHHSGGGTT----------TEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSC-CC
T ss_pred HHHHHHhhhhcCC----------cEEEEEEEecccceEEEEEEEEECCCCCHHHHHHHHHHhhhcccCCcccccCCC-ce
Confidence 2 12344322 5999999999999999999999999999999999999985432 144554432 11
Q ss_pred ccccccCCC-cEEE----EEEEeCcCCeEEEEEEehhhhHhHHHHHHHHHHHH
Q 015441 343 RTHNVRGSN-YCLM----NVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIM 390 (406)
Q Consensus 343 ~~~~v~g~n-~~~v----~~~~~~~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~ 390 (406)
+ .+-.|.. .+-+ ++..+ .+-+-+++--|| -.|=+-+-+..+..|
T Consensus 294 S-~d~~~~~~ssi~d~~~~~~~~--~~~vk~~~WyDN-E~gys~r~~dl~~~~ 342 (345)
T 2b4r_O 294 S-QDFVHDNRSSIFDMKAGLALN--DNFFKLVSWYDN-EWGYSNRVLDLAVHI 342 (345)
T ss_dssp G-GGGTTCCCSEEEEEEEEEEEE--TTEEEEEEEECT-THHHHHHHHHHHHHH
T ss_pred E-EeeCCCCcccccccccCeEec--CCEEEEEEEeCC-CcchHhHHHHHHHHH
Confidence 1 1223332 2222 11121 334558888999 567777777776665
No 33
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=2.6e-33 Score=279.46 Aligned_cols=272 Identities=11% Similarity=0.115 Sum_probs=190.1
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCc-----ccc--ccccCc--c-------ccCCCcccccCcc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQ-----SIG--SVFPHL--I-------SQDLPTMVAVKDA 125 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~-----~i~--~v~p~l--~-------~~~~~~~~~~~~~ 125 (406)
||+||||+|+ |+||+.++|+|.+||+++++++++.. ... +++ .+|+.| . +..+. +.....+
T Consensus 1 MmikVgI~G~-G~IGr~v~r~l~~~~~~evvaV~d~~-~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~-v~~~~~~ 77 (343)
T 2yyy_A 1 MPAKVLINGY-GSIGKRVADAVSMQDDMEVIGVTKTK-PDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIP-VEGTILD 77 (343)
T ss_dssp -CEEEEEECC-SHHHHHHHHHHHHSSSEEEEEEEESS-CSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCC-CCCBGGG
T ss_pred CceEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCC-HHHHHHHHHhcCCccccccCCCceeecccCCeEE-ECCchHH
Confidence 4689999997 99999999999999999999998742 222 122 344433 1 11221 1111123
Q ss_pred cCCCCCEEEEcCCCcchHHHHh-h-CCCCCEEEEcCCcccCCCccchhhhcCCC-CCCccchhhhhccccccchhhccCC
Q 015441 126 DFSNVDAVFCCLPHGTTQEIIK-G-LPKSLKIVDLSADFRLRDVSEYEEWYGQP-HIAPDLQKEAVYGLTEISREDIKNA 202 (406)
Q Consensus 126 ~~~~vDvVF~al~~~~s~~~~~-~-l~~G~~VIDlSa~fRl~~~~~~~~~y~~~-~~~Pevn~~~vyglpE~~~~~i~~~ 202 (406)
.+.++|+||+|+|++.+.++++ . +++|++|||.++ +.++ .+| +.+|++|.+. +.+.
T Consensus 78 ~~~~vDiV~eatg~~~s~~~a~~~~l~aG~~VI~sap--~~~d--------~vp~~vV~gvN~~~-----------~~~~ 136 (343)
T 2yyy_A 78 IIEDADIVVDGAPKKIGKQNLENIYKPHKVKAILQGG--EKAK--------DVEDNFNALWSYNR-----------CYGK 136 (343)
T ss_dssp TGGGCSEEEECCCTTHHHHHHHHTTTTTTCEEEECTT--SCGG--------GSSEEECTTTTHHH-----------HTTC
T ss_pred hccCCCEEEECCCccccHHHHHHHHHHCCCEEEECCC--cccc--------CCCceEEcccCHHH-----------hccC
Confidence 3458999999999999988885 5 478999997443 3322 266 7777776554 3446
Q ss_pred cEEecCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhcccHHHHhcCcccc----cCCcccchhhhhhh
Q 015441 203 RLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLYSEIAEGIYSY----GVTRHRHVPEIEQG 278 (406)
Q Consensus 203 ~iVanPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~~e~~~ni~py----~~~~h~h~pEi~~~ 278 (406)
++|+||||+|++++++|+||+++ |+++++.++|+|++||.|+.+ ++...|+.|+ ..+. ..++.+.
T Consensus 137 ~iIsn~sCtT~~lap~lk~L~~~--fgI~~~~vtT~~a~sg~~~~~------r~~~~NiiP~~i~~~tg~---~k~~~ki 205 (343)
T 2yyy_A 137 DYVRVVSCNTTGLCRILYAINSI--ADIKKARIVLVRRAADPNDDK------TGPVNAITPNPVTVPSHH---GPDVVSV 205 (343)
T ss_dssp SEEEECCHHHHHHHHHHHHHHTT--SEEEEEEEEEEEESSCTTCSS------CCCSSCCEESSSSSSCTH---HHHHHHH
T ss_pred CEEeccchhhHHHHHHHHHHHHH--cCceEEEEEeeeeccCcCcch------hhHHhcccCCCCCCCCcc---hHHHHHh
Confidence 89999999999999999999987 799999999999999976322 2556789998 3332 2222222
Q ss_pred hccccCCCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCCCcEEecCC-CCccccccc------cCCC
Q 015441 279 LTGFASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHEEFVKLLEK-GVVPRTHNV------RGSN 351 (406)
Q Consensus 279 l~~i~~~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~~fV~v~~~-~~~P~~~~v------~g~n 351 (406)
+-.+ +.+++.+|+||||++||+.+++++|+++++.||++++|+++ +++++.++ ...|.+... .|-.
T Consensus 206 lp~l---~gkl~~~avRVPv~~gh~~~l~v~l~~~~t~eei~~~l~~a----~~v~l~~~~~~l~s~~~~~~~~~~~gR~ 278 (343)
T 2yyy_A 206 VPEF---EGKILTSAVIVPTTLMHMHTLMVEVDGDVSRDDILEAIKKT----PRIITVRAEDGFSSTAKIIEYGRDLGRL 278 (343)
T ss_dssp CGGG---TTSEEEEEEEESCSSCEEEEEEEEEESCCCHHHHHHHHHHS----TTEEEECGGGTCCSHHHHHHHHHHHTCG
T ss_pred hhcc---ccceeeEEEEecccceEEEEEEEEECCCCCHHHHHHHHHhC----CCCEEeccccCCCCCcchhhhhhhcCCC
Confidence 2111 12599999999999999999999999999999999999998 77888764 124554322 2222
Q ss_pred c---EEEEEEEeC---cCCeEEEEEEehhh
Q 015441 352 Y---CLMNVFPDR---IPGRAIIISVIDNL 375 (406)
Q Consensus 352 ~---~~v~~~~~~---~~~~~~~~~v~DNL 375 (406)
+ ..+.+..+. ..+.+.++-++||-
T Consensus 279 r~d~~~~~~~~~~~~~~~~~~~~~~~~~q~ 308 (343)
T 2yyy_A 279 RYDINELVVWEESINVLENEIFLMQAVHQE 308 (343)
T ss_dssp GGCCCSEEEEGGGCEEETTEEEEEEEECTT
T ss_pred cCCchhheeeHhheEEcCCEEEEEEecCcC
Confidence 2 223333332 24567777888863
No 34
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=9e-34 Score=282.65 Aligned_cols=271 Identities=10% Similarity=0.132 Sum_probs=194.8
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCcc---ccc-cccCccc---------cCCCcccccCcccCCC
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQS---IGS-VFPHLIS---------QDLPTMVAVKDADFSN 129 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~---i~~-v~p~l~~---------~~~~~~~~~~~~~~~~ 129 (406)
|+||||+|+ |++|++++|+|.+||++++++++++. .+.. ... .++.+.. ..+...... ++.+.+
T Consensus 1 ~ikVgIiGa-G~iG~~~~r~L~~~p~~elvav~d~~-~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~-e~l~~~ 77 (340)
T 1b7g_O 1 MVNVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTS-PNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTV-EDLIKT 77 (340)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSS-CSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCH-HHHHHH
T ss_pred CeEEEEEec-CHHHHHHHHHHHcCCCCEEEEEEcCC-hHHHHHHHHhcCcceecCcCHHHHhcccccccccCH-hHhhcC
Confidence 479999998 99999999999999999999998854 2211 000 1111111 001000000 111247
Q ss_pred CCEEEEcCCCcchHHHHhhC-CCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchhhccCCcEEecC
Q 015441 130 VDAVFCCLPHGTTQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANP 208 (406)
Q Consensus 130 vDvVF~al~~~~s~~~~~~l-~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~~i~~~~iVanP 208 (406)
+|+||+|+|++.+++.++.+ ++|+++||+|+++|... .+..+|++|.+..|+ .++|+||
T Consensus 78 vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~~~~~---------~~~~v~~vN~~~~~~-----------~~iIsnp 137 (340)
T 1b7g_O 78 SDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVA---------DISFSALCNYNEALG-----------KKYIRVV 137 (340)
T ss_dssp CSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSCGGGS---------SCEECHHHHHHHHTT-----------CSEEEEC
T ss_pred CCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCCCCCC---------CCEEEcCcchHHHcC-----------CCCcccC
Confidence 99999999999999999875 78999999999998432 246666666544433 5689999
Q ss_pred CChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhcccHHHHhcCcc--cccCCcccchhhhhhhhccccCCC
Q 015441 209 GCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLYSEIAEGIY--SYGVTRHRHVPEIEQGLTGFASSK 286 (406)
Q Consensus 209 gC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~~e~~~ni~--py~~~~h~h~pEi~~~l~~i~~~~ 286 (406)
||+||+++++|+||+++ ++++++.++|+|+++.-++ ..++..+|++ ||++..| |.+|+.+.+ +.
T Consensus 138 sCtt~~l~~~lk~L~~~--~gI~~~~~tt~~~~~~~~~------~~~~~~~niip~~~~i~t~-~a~ev~~vl-----p~ 203 (340)
T 1b7g_O 138 SCNTTALLRTICTVNKV--SKVEKVRATIVRRAADQKE------VKKGPINSLVPDPATVPSH-HAKDVNSVI-----RN 203 (340)
T ss_dssp CHHHHHHHHHHHHHHTT--SCEEEEEEEEEEESSCTTC------CSCCCSSCCEESSSSSSCT-HHHHHHTTS-----TT
T ss_pred CcHHHHHHHHHHHHHHh--CCeEEEEEEEEeccCCccc------chHHHHcCCCCCCcCCCCC-chhHHHHhC-----CC
Confidence 99999999999999988 6899999999997753211 1235567887 6777777 678777655 35
Q ss_pred ceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCCCcEEecCCC-Ccccccc--------ccCC-CcEEEE
Q 015441 287 VTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHEEFVKLLEKG-VVPRTHN--------VRGS-NYCLMN 356 (406)
Q Consensus 287 ~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~~fV~v~~~~-~~P~~~~--------v~g~-n~~~v~ 356 (406)
++|+++|+|||+++||+.+++++|+++++.|||+++|+++ ++|++.++. ..|+|.. .+-+ +...+.
T Consensus 204 l~l~~~a~rVPv~~gh~~~l~v~l~~~~t~eei~~~l~~a----~~v~l~~~~~~l~s~~~~~~~~~~~~rp~~~~~~~~ 279 (340)
T 1b7g_O 204 LDIATMAVIAPTTLMHMHFINITLKDKVEKKDILSVLENT----PRIVLISSKYDAEATAELVEVARDLKRDRNDIPEVM 279 (340)
T ss_dssp CEEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHTC----TTEEEECSSSSCCSHHHHHHHHHHTTCGGGCCCSEE
T ss_pred CcEEEEEEEeccCCeEEEEEEEEECCCCCHHHHHHHHHcC----CCCEeeccccCCCChhHhhhhhhhcCCCcccchhee
Confidence 6799999999999999999999999999999999999976 889887642 3565531 1222 223344
Q ss_pred EEEeC---cCCeEEEEEEehh
Q 015441 357 VFPDR---IPGRAIIISVIDN 374 (406)
Q Consensus 357 ~~~~~---~~~~~~~~~v~DN 374 (406)
+..+. ..+.+.++-++||
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~q 300 (340)
T 1b7g_O 280 IFSDSIYVKDDEVMLMYAVHQ 300 (340)
T ss_dssp EEGGGCEEETTEEEEEEEECT
T ss_pred eehhheEEcCCEEEEEEecCc
Confidence 44332 3467888888885
No 35
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=100.00 E-value=7e-32 Score=266.92 Aligned_cols=288 Identities=13% Similarity=0.124 Sum_probs=199.3
Q ss_pred ccEEEEECcccHHHHHHHHHHHcC---CCceEEEEeccCcCC-----ccccccccCcc-------------ccCCCcccc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANH---PYFGIKLMTADRKAG-----QSIGSVFPHLI-------------SQDLPTMVA 121 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~h---p~~elv~l~s~~~~G-----~~i~~v~p~l~-------------~~~~~~~~~ 121 (406)
|+||||+|+ |+|||.++|+|.++ |+++++++++..... .+++++|..|. ++.+.....
T Consensus 1 ~ikVaInGf-GrIGr~v~r~l~~~~~~~~~evvaInd~~~~~~~a~ll~ydS~hg~f~~~v~~~~~~l~v~g~~i~v~~~ 79 (335)
T 1obf_O 1 TIRVAINGY-GRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDAN 79 (335)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECC
T ss_pred CcEEEEECC-CHHHHHHHHHHHhcCCCCCcEEEEEeCCCCHHHHHHHhccCCcCCCCCCCEEEeCCEEEECCEEEEEEEc
Confidence 479999996 99999999999988 899999998731110 12334443332 333332322
Q ss_pred cC--cccCC--CCCEEEEcCCCcchHHHHhh-CCCCCEEEEcCCcccCCCccchhhhcCCC-CCCccchhhhhccccccc
Q 015441 122 VK--DADFS--NVDAVFCCLPHGTTQEIIKG-LPKSLKIVDLSADFRLRDVSEYEEWYGQP-HIAPDLQKEAVYGLTEIS 195 (406)
Q Consensus 122 ~~--~~~~~--~vDvVF~al~~~~s~~~~~~-l~~G~~VIDlSa~fRl~~~~~~~~~y~~~-~~~Pevn~~~vyglpE~~ 195 (406)
.+ +.+|. ++|+||+|+|.+.+++.++. +++|++.|.+|++. ++ ++| +.+|++|.+. |.
T Consensus 80 ~dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps--~~--------dvp~~vV~gVN~~~-~~----- 143 (335)
T 1obf_O 80 RNPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPG--GA--------DVDATVVYGVNHGT-LK----- 143 (335)
T ss_dssp SCGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCC--CT--------TSSEECCTTTSGGG-CC-----
T ss_pred CCcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcc--cC--------CCCceEEccCCHHH-hC-----
Confidence 22 33464 89999999999999999986 47787433456543 32 478 8899888776 32
Q ss_pred hhhccCCcEEecCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhcccH-----HHHhcCcccccCCcc-
Q 015441 196 REDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLY-----SEIAEGIYSYGVTRH- 269 (406)
Q Consensus 196 ~~~i~~~~iVanPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~-----~e~~~ni~py~~~~h- 269 (406)
...+|||||+|+|++++++|+||+++ |+|+++.|+|+|++||. ++..|..+. ++++.|++|+..+.-
T Consensus 144 ----~~~~IISNasCTTn~Lap~lk~L~d~--fGI~~~~mTTvha~T~~-q~~~d~~~~d~r~~r~~a~NiIP~~tGaak 216 (335)
T 1obf_O 144 ----STDTVISNASCTTNCLAPLVKPLNDK--LGLQDGLMTTVHAYTNN-QVLTDVYHEDLRRARSATMSMIPTKTGAAA 216 (335)
T ss_dssp ----TTCCEEECCCHHHHHHHHHHHHHHHH--TCEEEEEEEEEEECCTT-SCSSCCCCSSTTTTSCTTTCCEEEECCHHH
T ss_pred ----cCccEEeCCcHHHHHHHHHHHHHHHh--cCeeEEEEEEEchhhhh-hhhhcccccccccccchhhccccCCCcchH
Confidence 12579999999999999999999998 79999999999999999 455554321 355678888865431
Q ss_pred ---cchhhhhhhhccccCCCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCC--CcEEecCCCCcccc
Q 015441 270 ---RHVPEIEQGLTGFASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHE--EFVKLLEKGVVPRT 344 (406)
Q Consensus 270 ---~h~pEi~~~l~~i~~~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~--~fV~v~~~~~~P~~ 344 (406)
+.+||+.. +++.+|+||||++||+.+++++|+++++.|||+++|+++.++. -.+.+.+++ .-+.
T Consensus 217 av~kVlP~L~g----------kltg~avRVPv~~~s~~dl~v~lek~~t~eei~~~lk~a~~~~lkgil~y~~~~-~vS~ 285 (335)
T 1obf_O 217 AVGDVLPELDG----------KLNGYAIRVPTINVSIVDLSFVAKRNTTVEEVNGILKAASEGELKGILDYNTEP-LVSV 285 (335)
T ss_dssp HHHHHCGGGTT----------SEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSC-CCGG
T ss_pred hHhhhccccCC----------ceEEEEEEeeccceEEEEEEEEECCCCCHHHHHHHHHHhhhcccCCeecccCCc-eEee
Confidence 12333322 6999999999999999999999999999999999999985332 144554432 1111
Q ss_pred ccccCCCc-EEE----EEEEeCcCCeEEEEEEehhhhHhHHHHHHHHHHHH
Q 015441 345 HNVRGSNY-CLM----NVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIM 390 (406)
Q Consensus 345 ~~v~g~n~-~~v----~~~~~~~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~ 390 (406)
+-.|..+ +-+ ++. ..+-+-+++--|| -+|=+-+-+..+..|
T Consensus 286 -d~~~~~~ssi~d~~~~~~---~~~~vk~~~WyDN-E~gys~r~~dl~~~~ 331 (335)
T 1obf_O 286 -DYNHDPASSTVDASLTKV---SGRLVKVSSWYDN-EWGFSNRMLDTTVAL 331 (335)
T ss_dssp -GGTTCCCSEEEEGGGCEE---ETTEEEEEEEECT-THHHHHHHHHHHHHH
T ss_pred -eeCCCCccceeccccccc---cCCEEEEEEEeCC-CcchHhHHHHHHHHH
Confidence 2223222 111 111 1234457888899 566677777776665
No 36
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=1.9e-32 Score=271.40 Aligned_cols=287 Identities=15% Similarity=0.166 Sum_probs=198.5
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCC-----ccccccccCcc-------------ccCCCcccccC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAG-----QSIGSVFPHLI-------------SQDLPTMVAVK 123 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G-----~~i~~v~p~l~-------------~~~~~~~~~~~ 123 (406)
|++||||+|+ |.|||.++|+|.++|+++++++++..... .+++++|..|. ++.+..+.+.+
T Consensus 1 m~ikV~InGf-GrIGr~v~r~l~~~~~~evvaInd~~~~~~~a~ll~yDs~hG~~~~~v~~~~~~l~v~Gk~i~v~~~~d 79 (342)
T 2ep7_A 1 MAIKVGINGF-GRIGRSFFRASWGREEIEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVEAKDDSIVVDGKEIKVFAQKD 79 (342)
T ss_dssp --CEEEEECC-SHHHHHHHHHHTTCTTCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEEEECCSS
T ss_pred CceEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHhhhhhcccccccCCCcEEEcCCEEEECCEEEEEEEcCC
Confidence 4589999996 99999999999999999999998741110 12334443322 23333332233
Q ss_pred cc--cCC--CCCEEEEcCCCcchHHHHhhC-CCCCE--EEEcCCcccCCCccchhhhcCCC-CCCccchhhhhccccccc
Q 015441 124 DA--DFS--NVDAVFCCLPHGTTQEIIKGL-PKSLK--IVDLSADFRLRDVSEYEEWYGQP-HIAPDLQKEAVYGLTEIS 195 (406)
Q Consensus 124 ~~--~~~--~vDvVF~al~~~~s~~~~~~l-~~G~~--VIDlSa~fRl~~~~~~~~~y~~~-~~~Pevn~~~vyglpE~~ 195 (406)
+. +|. ++|+||+|+|.+.+++.++.. ++|++ |||++++ ++| +.+|++|.+. |.
T Consensus 80 p~~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~-------------dvp~~vV~gVN~~~-~~----- 140 (342)
T 2ep7_A 80 PSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAK-------------NPDITVVLGVNEEK-YN----- 140 (342)
T ss_dssp GGGCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCB-------------SCSEECCTTTSGGG-CC-----
T ss_pred hhhCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCC-------------CCCceEEcCcCHHH-hc-----
Confidence 32 354 899999999999999999874 77874 4444432 478 8899888774 32
Q ss_pred hhhccCCcEEecCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhccc-----HHHHhcCcccccCCcc-
Q 015441 196 REDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANL-----YSEIAEGIYSYGVTRH- 269 (406)
Q Consensus 196 ~~~i~~~~iVanPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~-----~~e~~~ni~py~~~~h- 269 (406)
. ...+|||||+|+|++++++|+||+++ |+|+++.|+|+|++||+++ ..|..+ .++++.|++|+..+.-
T Consensus 141 ~---~~~~IISNasCTTn~Lap~lk~L~d~--fGI~~~~mTTvha~T~~q~-~~d~p~~d~r~~r~~a~NiIP~~tGaak 214 (342)
T 2ep7_A 141 P---KEHNIISNASCTTNCLAPCVKVLNEA--FGVEKGYMVTVHAYTNDQR-LLDLPHKDFRRARAAAINIVPTTTGAAK 214 (342)
T ss_dssp T---TTCCEEECCCHHHHHHHHHHHHHHHH--HCEEEEEEEEEEECCTTSB-SSSCCCSSTTTTSBGGGCCEEECCCTTG
T ss_pred c---cCCeEEECCChHHHHHHHHHHHHHHH--cCeeEEEEEEEeecccchh-hhcCCcchhhhhhhHhhCccCCCCChHH
Confidence 0 13689999999999999999999998 7999999999999999954 444322 1356789999876542
Q ss_pred ---cchhhhhhhhccccCCCceEEEEEEEeeecceeEEEEEEEeCC-CCCHHHHHHHHHHHcCC-------C--CcEEec
Q 015441 270 ---RHVPEIEQGLTGFASSKVTVSFTPHLMPMIRGMQSTIYVEMAP-GVTIEDLYQQLKISYEH-------E--EFVKLL 336 (406)
Q Consensus 270 ---~h~pEi~~~l~~i~~~~~~v~~t~~rVPv~rG~~~ti~v~l~~-~~s~eev~~~l~~~y~~-------~--~fV~v~ 336 (406)
+.+||+.. +++.+|+||||++||+.+++++|++ +++.|||+++|+++.++ . -.+.+.
T Consensus 215 av~kVlP~L~g----------kltg~avRVPv~~~s~~dltv~lek~~~t~eei~~~lk~a~~~~~~~~~~~lkgil~y~ 284 (342)
T 2ep7_A 215 AIGEVIPELKG----------KLDGTARRVPVPDGSLIDLTVVVNKAPSSVEEVNEKFREAAQKYRESGKVYLKEILQYC 284 (342)
T ss_dssp GGGGTSGGGTT----------TEEEEEEEESCSSCEEEEEEEEESSCCSCHHHHHHHHHHHHHHHHTSCCGGGTTSEEEE
T ss_pred HHHHhhhccCC----------CEEEEEEEecccceEEEEEEEEEcCCCCCHHHHHHHHHHHhcCCccccccccccccccc
Confidence 23344432 5999999999999999999999999 99999999999998543 1 234554
Q ss_pred CCCCccccccccCCCcEEEEEEEeC-----cCCeEEEEEEehhhhHhHHHHHHHHHHHH
Q 015441 337 EKGVVPRTHNVRGSNYCLMNVFPDR-----IPGRAIIISVIDNLVKGASGQALQNLNIM 390 (406)
Q Consensus 337 ~~~~~P~~~~v~g~n~~~v~~~~~~-----~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~ 390 (406)
+++ .-+. +-.|..+-.| .|. ..+-+-+++--|| -.|=+-+-+..+..|
T Consensus 285 ~~~-~vS~-d~~~~~~ssi---~d~~~~~~~~~~vk~~~wyDN-E~gys~r~~dl~~~~ 337 (342)
T 2ep7_A 285 EDP-IVST-DIVGNPHSAI---FDAPLTQVIDNLVHIAAWYDN-EWGYSCRLRDLVIYL 337 (342)
T ss_dssp CSC-CCGG-GGTTCCCSEE---EEGGGCEEETTEEEEEEEECT-THHHHHHHHHHHHHH
T ss_pred CCC-eEee-eECCCCccce---eccccccccCCEEEEEEEECC-CccchhHHHHHHHHH
Confidence 432 1111 2223222111 111 1234457788899 567777777777666
No 37
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=100.00 E-value=2.5e-32 Score=268.91 Aligned_cols=291 Identities=13% Similarity=0.112 Sum_probs=205.3
Q ss_pred CccEEEEECcccHHHHHHHHHHHcC--CCceEEEEeccCcCC-----ccccccccCccc-------------cCCCcccc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANH--PYFGIKLMTADRKAG-----QSIGSVFPHLIS-------------QDLPTMVA 121 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~h--p~~elv~l~s~~~~G-----~~i~~v~p~l~~-------------~~~~~~~~ 121 (406)
|++||+|+| .|+|||.++|.+.++ +.+|++++++..+.. .+++++|+.|.+ +.+..+++
T Consensus 1 m~~kv~ING-fGrIGr~v~Ra~~~~~~~~~~ivaiNd~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e 79 (335)
T 3doc_A 1 MAVRVAING-FGRIGRNILRAIVESGRTDIQVVAINDLGPVETNAHLLRYDSVHGRFPKEVEVAGDTIDVGYGPIKVHAV 79 (335)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEEEECSSCHHHHHHHHHEETTTEECSSCCEECSSEEESSSSEEEEECC
T ss_pred CCEEEEEEC-CCcHHHHHHHHHHhccCCCeEEEEEeCCCCHHHHHHHhcccCCCCCCCCeEEEecCEEEECCEEEEEEee
Confidence 578999999 999999999988876 789999999753221 256777776642 33333222
Q ss_pred cC--cccCC--CCCEEEEcCCCcchHHHHhh-CCCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccch
Q 015441 122 VK--DADFS--NVDAVFCCLPHGTTQEIIKG-LPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISR 196 (406)
Q Consensus 122 ~~--~~~~~--~vDvVF~al~~~~s~~~~~~-l~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~ 196 (406)
.+ ..+|. ++|+||+|+|.+.+++.++. +++|++.|.+|++. . + +.|+.+|++|.+.. .
T Consensus 80 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps-~-d--------~~p~vV~gVN~~~~-~------ 142 (335)
T 3doc_A 80 RNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPA-D-G--------ADLTVVYGVNNDKL-T------ 142 (335)
T ss_dssp SSTTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC-T-T--------CSEECCTTTTGGGC-C------
T ss_pred cccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCC-C-C--------CCCEEecccCHHHh-C------
Confidence 22 23464 89999999999999999976 57888544456542 2 2 25888888877643 1
Q ss_pred hhccCCcEEecCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhccc-----HHHHhcCcccccCCcc--
Q 015441 197 EDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANL-----YSEIAEGIYSYGVTRH-- 269 (406)
Q Consensus 197 ~~i~~~~iVanPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~-----~~e~~~ni~py~~~~h-- 269 (406)
...+|||||+|+|++++++|+||+++ |+|+++.|+|+|++||+++ .+|.++ .+.++.|+.|...+.-
T Consensus 143 ---~~~~IISNasCTTn~Lap~lk~L~d~--fGI~~g~mTTvha~T~~q~-~~D~p~kd~r~~r~aa~NiIP~~tGaaka 216 (335)
T 3doc_A 143 ---KDHLVISNASCTTNCLAPVAQVLNDT--IGIEKGFMTTIHSYTGDQP-TLDTMHKDLYRARAAALSMIPTSTGAAKA 216 (335)
T ss_dssp ---TTCCEEECCCHHHHHHHHHHHHHHHH--TCEEEEEEEEEEECCTTSC-SSCCCCSSTTTTSCTTSSCEEEECCHHHH
T ss_pred ---ccCCeEecCchhhhhhHHhHHHHHHH--cCEEEEEEEeeeeccchhh-hhcCccccccccccCcceEecCCCchHHH
Confidence 13689999999999999999999998 7999999999999999954 455432 1355678999876642
Q ss_pred --cchhhhhhhhccccCCCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCC--CcEEecCCCCccccc
Q 015441 270 --RHVPEIEQGLTGFASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHE--EFVKLLEKGVVPRTH 345 (406)
Q Consensus 270 --~h~pEi~~~l~~i~~~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~--~fV~v~~~~~~P~~~ 345 (406)
+.+||+.. +++.+|+|||+++||+.+++++|+++++.|||+++|+++.++. -.+.+.+++ .-+ .
T Consensus 217 v~kVlPeL~g----------kltg~avRVPv~~~s~~dlt~~lek~~t~eei~~~lk~A~~g~lkgil~yte~~-~VS-~ 284 (335)
T 3doc_A 217 VGLVLPELKG----------KLDGVAIRVPTPNVSVVDLTFIAKRETTVEEVNNAIREAANGRLKGILGYTDEK-LVS-H 284 (335)
T ss_dssp HHHHSGGGTT----------CEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTTEEEECSC-CCG-G
T ss_pred HHHhccccCC----------CEEEEEEEeccccccceEEEEEECCCCCHHHHHHHHHHhhcCCcCCeeEEEcCC-eEe-e
Confidence 23455543 6999999999999999999999999999999999999985442 134454432 111 1
Q ss_pred cccCCCc-EEE----EEEEeCcCCeEEEEEEehhhhHhHHHHHHHHHHHHh
Q 015441 346 NVRGSNY-CLM----NVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIML 391 (406)
Q Consensus 346 ~v~g~n~-~~v----~~~~~~~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~~ 391 (406)
+-.|..+ +-+ ++.. ..+-+-+++--|| -.|=+-+-+..+..|.
T Consensus 285 Df~~~~~ssi~d~~~t~~~--~~~~vk~~~WYDN-E~gys~r~~dl~~~~~ 332 (335)
T 3doc_A 285 DFNHDSHSSVFHTDQTKVM--DGTMVRILSWYDN-EWGFSSRMSDTAVALG 332 (335)
T ss_dssp GGTTCCCSEEEEGGGCEEE--TTTEEEEEEEECT-THHHHHHHHHHHHHHH
T ss_pred eeCCCCCccccCchhhEEE--cCCEEEEEEEEcC-ccchHHHHHHHHHHHH
Confidence 2222222 111 1111 1233447777899 4677777777776664
No 38
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=99.98 E-value=1.8e-31 Score=264.31 Aligned_cols=288 Identities=15% Similarity=0.177 Sum_probs=201.7
Q ss_pred cCCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCC-----ccccccccCcc-------------ccCCCcccc
Q 015441 60 SEKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAG-----QSIGSVFPHLI-------------SQDLPTMVA 121 (406)
Q Consensus 60 ~~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G-----~~i~~v~p~l~-------------~~~~~~~~~ 121 (406)
+.|++||||+|+ |.|||.++|+|.++ +++++++.+..+.. .+++++|+.|. ++.+..++.
T Consensus 18 ~~~~~kVaInGf-GrIGr~vlr~l~e~-~~~ivaIndl~d~~~~a~llkydS~hG~f~~~v~~~~~~l~i~Gk~I~v~~~ 95 (356)
T 3hja_A 18 GPGSMKLAINGF-GRIGRNVFKIAFER-GIDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVESRDGAIVVDGREIKIIAE 95 (356)
T ss_dssp ----CEEEEECC-SHHHHHHHHHHHHT-TCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECC
T ss_pred CCCCeEEEEECC-CHHHHHHHHHHHHC-CCCEEEEeCCCCHHHhhhhhccccCCCCCCCCEEEcCCEEEECCEEEEEEEc
Confidence 355689999997 99999999999887 79999998753211 23466666554 233332222
Q ss_pred cCcc--cC--CCCCEEEEcCCCcch----HHHHhh-CC-CCCE--EEEcCCcccCCCccchhhhcCCCCCCccchhhhhc
Q 015441 122 VKDA--DF--SNVDAVFCCLPHGTT----QEIIKG-LP-KSLK--IVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVY 189 (406)
Q Consensus 122 ~~~~--~~--~~vDvVF~al~~~~s----~~~~~~-l~-~G~~--VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vy 189 (406)
.++. +| .++|+||+|+|.+.+ ++.++. ++ +|++ |||+++. + ++|+++|++|.+..-
T Consensus 96 ~dp~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~----d--------~vp~vV~gVN~~~~~ 163 (356)
T 3hja_A 96 RDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAK----D--------EIKTIVLGVNDHDIN 163 (356)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCS----S--------CCEECCTTTSGGGCC
T ss_pred CChhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCC----C--------CCCEEeccCCHHHcC
Confidence 2232 34 389999999999999 888875 67 8875 7887762 2 368888888776431
Q ss_pred cccccchhhccCCcEEecCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhccc-----HHHHhcCcccc
Q 015441 190 GLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANL-----YSEIAEGIYSY 264 (406)
Q Consensus 190 glpE~~~~~i~~~~iVanPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~-----~~e~~~ni~py 264 (406)
...+|||||+|+|++++++|+||+++ |+|+++.|+|+|++||+++ ..|.++ .+.++.|++|+
T Consensus 164 ----------~~~~IISNaSCTTn~Lap~lkvL~d~--fGI~~g~mTTvhA~T~~Q~-~~D~p~kd~r~~r~aa~NIIP~ 230 (356)
T 3hja_A 164 ----------SDLKAVSNASCTTNCLAPLAKVLHES--FGIEQGLMTTVHAYTNDQR-ILDLPHSDLRRARAAALSIIPT 230 (356)
T ss_dssp ----------TTCCEEECCCHHHHHHHHHHHHHHHH--HCEEEEEEEEEEECCTTSB-SSSCCCSSTTTTSBTTTSCEEE
T ss_pred ----------cCccEEECCccchhhhhHhHHHHHHh--cCeEEEEEEEEEecccccc-cccCcccccccccccccEEEcC
Confidence 13589999999999999999999998 7999999999999999954 444433 13557899998
Q ss_pred cCCccc----chhhhhhhhccccCCCceEEEEEEEeeecceeEEEEEEEe-CCCCCHHHHHHHHHHHcCCC---CcEEec
Q 015441 265 GVTRHR----HVPEIEQGLTGFASSKVTVSFTPHLMPMIRGMQSTIYVEM-APGVTIEDLYQQLKISYEHE---EFVKLL 336 (406)
Q Consensus 265 ~~~~h~----h~pEi~~~l~~i~~~~~~v~~t~~rVPv~rG~~~ti~v~l-~~~~s~eev~~~l~~~y~~~---~fV~v~ 336 (406)
..+.-+ .+||+.. +++.+|+|||+++||+.+++++| +++++.|||+++|+++.++. -.+.+.
T Consensus 231 ~tGaakav~kVlPeL~g----------kltg~avRVPv~~~s~~dlt~~l~ek~~t~eeI~~~lk~Aa~g~~lkgil~yt 300 (356)
T 3hja_A 231 STGAAKAVGLVLPELKG----------KLNGTSMRVPVPTGSIVDLTVQLKKKDVTKEEINSVLRKASETPELKGILGYT 300 (356)
T ss_dssp ECCTTTTHHHHCGGGTT----------TEEEEEEEESCSSCEEEEEEEEESCTTCCHHHHHHHHHHHHHSTTTTTTEEEE
T ss_pred CCchHHHHHHhccccCC----------cEEEEEEEcCCCccEeEEEEEEEccCCCCHHHHHHHHHHHhcCchhcccccee
Confidence 766432 3455543 69999999999999999999999 99999999999999986654 234554
Q ss_pred CCCCccccccccCCCcEEEEEEEeC------cCCeEEEEEEehhhhHhHHHHHHHHHHHH
Q 015441 337 EKGVVPRTHNVRGSNYCLMNVFPDR------IPGRAIIISVIDNLVKGASGQALQNLNIM 390 (406)
Q Consensus 337 ~~~~~P~~~~v~g~n~~~v~~~~~~------~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~ 390 (406)
+++ .-+ .+-.|..+-.| .|. ..+-+-+++--|| -.|=+-+-|..+..|
T Consensus 301 e~~-~VS-~Df~~~~~ssi---~d~~~t~~~~~~~vk~~~WYDN-E~Gys~r~vdl~~~~ 354 (356)
T 3hja_A 301 EDP-IVS-SDIKGNSHSSI---VDGLETMVLENGFAKILSWYDN-EFGYSTRVVDLAQKL 354 (356)
T ss_dssp CSC-CCG-GGGTTCCCSEE---EEGGGCEECSTTEEEEEEEECT-THHHHHHHHHHHHHH
T ss_pred cCC-eEe-eeccCCCCceE---EcCcCCEEEcCCEEEEEEEECC-ccchHHHHHHHHHHH
Confidence 432 111 12223322111 111 1234457778899 466666666666554
No 39
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=99.98 E-value=2.1e-32 Score=269.92 Aligned_cols=292 Identities=12% Similarity=0.132 Sum_probs=199.4
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCC-----ccccccccCccc-------------cCCCcccccC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAG-----QSIGSVFPHLIS-------------QDLPTMVAVK 123 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G-----~~i~~v~p~l~~-------------~~~~~~~~~~ 123 (406)
.|+||||+| .|+|||.++|.+.+++.+|++++++..... .+++++|+.|.+ +.+..+++.+
T Consensus 3 ~~~kv~ING-fGrIGr~v~Ra~~~~~~~~ivaINd~~d~~~~a~llkyDS~hG~f~~~v~~~~~~l~inGk~I~v~~e~d 81 (345)
T 4dib_A 3 AMTRVAING-FGRIGRMVFRQAIKESAFEIVAINASYPSETLAHLIKYDTVHGKFDGTVEAFEDHLLVDGKMIRLLNNRD 81 (345)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHTTCSSSEEEEEECSSCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEEEECCSC
T ss_pred ccEEEEEEC-CCcHHHHHHHHHHhCCCceEEEEcCCCCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEEEeecCC
Confidence 368999999 999999999999988999999999753221 257777777652 2333222222
Q ss_pred c--ccCC--CCCEEEEcCCCcchHHHHhh-CCCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchhh
Q 015441 124 D--ADFS--NVDAVFCCLPHGTTQEIIKG-LPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISRED 198 (406)
Q Consensus 124 ~--~~~~--~vDvVF~al~~~~s~~~~~~-l~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~~ 198 (406)
+ .+|. ++|+||+|+|.+.+++.++. +++|++.|.+|++. ++ ++|+++|++|.+..-.
T Consensus 82 p~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps--~~--------d~p~vV~gVN~~~~~~-------- 143 (345)
T 4dib_A 82 PKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPG--KN--------EDVTIVVGVNEDQLDI-------- 143 (345)
T ss_dssp GGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC--BS--------CSEECCTTTTGGGCCT--------
T ss_pred hhhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCC--CC--------CCCEEEecCCHHHcCc--------
Confidence 2 2454 89999999999999999976 67887444455543 23 3688888887764310
Q ss_pred ccCCcEEecCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhcccH-----HHHhcCcccccCCcc----
Q 015441 199 IKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLY-----SEIAEGIYSYGVTRH---- 269 (406)
Q Consensus 199 i~~~~iVanPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~-----~e~~~ni~py~~~~h---- 269 (406)
...+|||||+|+|++++++|+||+++ |+|+++.|+|+|++||++ +..|.++. +.++.|+.|...+.-
T Consensus 144 -~~~~IISNaSCTTn~Lap~lkvL~d~--fGI~~g~mTTvhA~T~~Q-~~~D~p~kd~r~~r~aa~NIIP~~tGaakav~ 219 (345)
T 4dib_A 144 -TKHTVISNASCTTNCLAPVVKVLDEQ--FGIENGLMTTVHAYTNDQ-KNIDNPHKDLRRARACGQSIIPTTTGAAKALA 219 (345)
T ss_dssp -TTCSEEECCCHHHHHHHHHHHHHHHH--HCEEEEEEEEEECC--------------CCTTSCTTTCCEEECCTHHHHHH
T ss_pred -ccCeEEECCchhhhhhHHHHHHHHHh--cCeEEEEEEeeeeccCCc-eeccccccccccchhhhhceecCCCchHHHHh
Confidence 13689999999999999999999998 799999999999999985 44554331 245678888876542
Q ss_pred cchhhhhhhhccccCCCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCC--CcEEecCCCCccccccc
Q 015441 270 RHVPEIEQGLTGFASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHE--EFVKLLEKGVVPRTHNV 347 (406)
Q Consensus 270 ~h~pEi~~~l~~i~~~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~--~fV~v~~~~~~P~~~~v 347 (406)
+.+||+.. +++.+|+|||+++||+.+++++|+++++.|||+++|+++.++. -.+.+.+++ .-. .+-
T Consensus 220 kVlPeL~g----------kltg~avRVPv~~~s~~dlt~~lek~~t~eei~~~lk~As~g~lkgil~yte~~-~VS-~Df 287 (345)
T 4dib_A 220 KVLPHLNG----------KLHGMALRVPTPNVSLVDLVVDVKRDVTVEAINDAFKTVANGALKGIVEFSEEP-LVS-IDF 287 (345)
T ss_dssp HHCGGGTT----------TEEEEEEECCCSSEEEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTTEEEECSC-CCG-GGG
T ss_pred hhccccCC----------cEEEEEEEccCcccEEEEEEEEECCCCCHHHHHHHHHHhhcCcccceeeeEcCc-Eee-eec
Confidence 23455543 5899999999999999999999999999999999999986542 134554432 111 122
Q ss_pred cCCCc-EEE----EEEEeCcCCeEEEEEEehhhhHhHHHHHHHHHHHHh
Q 015441 348 RGSNY-CLM----NVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIML 391 (406)
Q Consensus 348 ~g~n~-~~v----~~~~~~~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~~ 391 (406)
.|..+ +-+ +... ..+-+-+++--|| -.|=+-+-+..+..|.
T Consensus 288 ~~~~~ssi~d~~~t~~~--~~~~vk~~~WYDN-E~Gys~r~~dl~~~~~ 333 (345)
T 4dib_A 288 NTNTHSAIIDGLSTMVM--GDRKVKVLAWYDN-EWGYSRRVVDLVTLVV 333 (345)
T ss_dssp TTCCCSEEEEGGGCEEE--TTTEEEEEEEEET-THHHHHHHHHHHHHHH
T ss_pred CCCCcchhhhhhccEEE--CCCEEEEEEEECC-CcchHHHHHHHHHHHH
Confidence 22222 111 1111 1234457777899 4676777777776664
No 40
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=99.97 E-value=1.2e-31 Score=265.07 Aligned_cols=298 Identities=10% Similarity=0.131 Sum_probs=209.1
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccC-cCC-----ccccccccCccc-------------cCCCcccc
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADR-KAG-----QSIGSVFPHLIS-------------QDLPTMVA 121 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~-~~G-----~~i~~v~p~l~~-------------~~~~~~~~ 121 (406)
.+|+||+|+| .|+||+.++|.+.+++ ++++++++.. +.. .+++++|+.|.+ +.+..+++
T Consensus 5 ~~~~kvgInG-FGRIGrlv~R~~~~~~-veivainDp~~d~~~~a~l~~yDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e 82 (346)
T 3h9e_O 5 ARELTVGING-FGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVEFRNGQLVVDNHEISVYQC 82 (346)
T ss_dssp -CCCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECC
T ss_pred CCeeEEEEEC-CChHHHHHHHHHHhCC-CEEEEEeCCCCChhHhcccccccCCCCCCCCcEEEcCCEEEECCEEEEEEec
Confidence 4568999999 9999999999988777 9999998742 211 257777777652 33333333
Q ss_pred cCcc--cCC--CCCEEEEcCCCcchHHHHhh-CCCCC--EEEEcCCcccCCCccchhhhcCCCCCCccchhhhhcccccc
Q 015441 122 VKDA--DFS--NVDAVFCCLPHGTTQEIIKG-LPKSL--KIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEI 194 (406)
Q Consensus 122 ~~~~--~~~--~vDvVF~al~~~~s~~~~~~-l~~G~--~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~ 194 (406)
.+++ +|. ++|+||+|+|.+.+++.++. +++|+ +|||++++ ++|+++|++|.+..-.
T Consensus 83 ~dp~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~-------------d~plvV~gVN~~~~~~---- 145 (346)
T 3h9e_O 83 KEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSP-------------DAPMFVMGVNENDYNP---- 145 (346)
T ss_dssp SSGGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCS-------------SSCBCCTTTTGGGCCT----
T ss_pred CChhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCC-------------CCCeeCcccCHHHcCc----
Confidence 3333 343 89999999999999999876 57887 78888764 3688898888765310
Q ss_pred chhhccCCcEEecCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhccc------HHHHhcCcccccCCc
Q 015441 195 SREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANL------YSEIAEGIYSYGVTR 268 (406)
Q Consensus 195 ~~~~i~~~~iVanPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~------~~e~~~ni~py~~~~ 268 (406)
.+.+|||||+|+|++++++|+||+++ |+|+++.|+|+|++||.++ ..|..+ .+.++.|++|...+.
T Consensus 146 -----~~~~IISNasCTTn~Lap~lkvL~d~--fGI~~g~mTTvhA~T~tQ~-~~Dg~~~kd~r~~r~aa~NiIP~~tGa 217 (346)
T 3h9e_O 146 -----GSMNIVSNASCTTNCLAPLAKVIHER--FGIVEGLMTTVHSYTATQK-TVDGPSRKAWRDGRGAHQNIIPASTGA 217 (346)
T ss_dssp -----TTCSEEECCCHHHHHHHHHHHHHHHH--HCEEEEEEEEEEECCTTSB-SSSCCCTTSGGGGSBTTTCCEEECCHH
T ss_pred -----ccCCEEECCcchhhhHHHHHHHHHHH--hCeeEEEEeeeeeccCccc-cccCCCCCCccccccceeeeecccCch
Confidence 14689999999999999999999998 7999999999999999864 344322 135677888887654
Q ss_pred c----cchhhhhhhhccccCCCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCC--CcEEecCCCCcc
Q 015441 269 H----RHVPEIEQGLTGFASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHE--EFVKLLEKGVVP 342 (406)
Q Consensus 269 h----~h~pEi~~~l~~i~~~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~--~fV~v~~~~~~P 342 (406)
. +.+||+.. +++.+|+||||++||+.+++++|+++++.|||+++|+++.++. -.+.+.+++ .-
T Consensus 218 akavgkViPeL~g----------kltg~avRVPv~~~s~~dlt~~lek~~t~eei~~~lk~A~~g~lkgil~yte~~-~V 286 (346)
T 3h9e_O 218 AKAVTKVIPELKG----------KLTGMAFRVPTPDVSVVDLTCRLAQPAPYSAIKEAVKAAAKGPMAGILAYTEDE-VV 286 (346)
T ss_dssp HHHHHHHSGGGTT----------TEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSC-CC
T ss_pred HHhhheechhhcC----------cEEEEEEEcccccceeEEEEEEECCcCCHHHHHHHHHHhccCccCCceeEEcCC-eE
Confidence 3 23455533 6999999999999999999999999999999999999985432 134444332 11
Q ss_pred ccccccCCCc-EEE----EEEEeCcCCeEEEEEEehhhhHhHHHHHHHHHHHHhCCCcccCCCC
Q 015441 343 RTHNVRGSNY-CLM----NVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGLLY 401 (406)
Q Consensus 343 ~~~~v~g~n~-~~v----~~~~~~~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~~g~~e~~gl~~ 401 (406)
.. +-.|..+ +-+ ++..+ .+-+-+++--|| -.|=+-+-|..|..|.. .|..||.+
T Consensus 287 S~-Df~~~~~ssi~d~~~~~~~~--~~~vk~~~WYDN-E~gys~r~~dl~~~~~~-~~~~~~~~ 345 (346)
T 3h9e_O 287 ST-DFLGDTHSSIFDAKAGIALN--DNFVKLISWYDN-EYGYSHRVVDLLRYMFS-RDAENLYF 345 (346)
T ss_dssp GG-GGTTCCCSEEEETTTCEEEE--TTEEEEEEEECT-THHHHHHHHHHHHHHHH-HHCC----
T ss_pred ee-ccCCCCCceeEcccccEEec--CCEEEEEEEECC-CcchHHHHHHHHHHHHh-hhccCccc
Confidence 11 2222222 111 11111 233447777899 47777778888876654 45667654
No 41
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=99.97 E-value=2.6e-31 Score=261.40 Aligned_cols=288 Identities=13% Similarity=0.175 Sum_probs=203.5
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccC-cCC-----ccccccccCccc-------------cCCCcccccC
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADR-KAG-----QSIGSVFPHLIS-------------QDLPTMVAVK 123 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~-~~G-----~~i~~v~p~l~~-------------~~~~~~~~~~ 123 (406)
|+||+|+| .|+|||.++|.+.+++.+|++++++.. +.. .+++++|+.|.+ +.+..+++.+
T Consensus 1 ~~kv~ING-fGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~d 79 (332)
T 3pym_A 1 MVRVAING-FGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSHDDKHIIVDGKKIATYQERD 79 (332)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHSTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred CeEEEEEC-CCcHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEEEEeecc
Confidence 57999999 999999999999888899999999742 221 357777777652 2333222222
Q ss_pred c--ccCC--CCCEEEEcCCCcchHHHHhh-CCCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchhh
Q 015441 124 D--ADFS--NVDAVFCCLPHGTTQEIIKG-LPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISRED 198 (406)
Q Consensus 124 ~--~~~~--~vDvVF~al~~~~s~~~~~~-l~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~~ 198 (406)
+ .+|. ++|+||+|+|.+.+++.+++ +++|++.|.+|++. . ++|+.+|++|.+.. .
T Consensus 80 p~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps--~---------d~p~vV~gVN~~~~-~-------- 139 (332)
T 3pym_A 80 PANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPS--S---------TAPMFVMGVNEEKY-T-------- 139 (332)
T ss_dssp GGGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCC--S---------SSCBCCTTTTGGGC-C--------
T ss_pred cccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCC--C---------CCCeEeeccchhhc-C--------
Confidence 2 2454 89999999999999999976 67888544456543 2 36888888877643 1
Q ss_pred ccCCcEEecCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhccc------HHHHhcCcccccCCcc---
Q 015441 199 IKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANL------YSEIAEGIYSYGVTRH--- 269 (406)
Q Consensus 199 i~~~~iVanPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~------~~e~~~ni~py~~~~h--- 269 (406)
...+|||||+|+|++++++|+||+++ |+|+++.|+|+|++||+++ .+|..+ .+.++.|+.|...+.-
T Consensus 140 -~~~~IISnasCTTn~Lap~lkvL~d~--fGI~~g~mTTvha~T~~Q~-~vDg~~~kd~r~~r~aa~NiIP~~tGaakav 215 (332)
T 3pym_A 140 -SDLKIVSNASCTTNCLAPLAKVINDA--FGIEEGLMTTVHSLTATQK-TVDGPSHKDWRGGRTASGNIIPSSTGAAKAV 215 (332)
T ss_dssp -TTCCEEECCCHHHHHHHHHHHHHHHH--HCEEEEEEEEEEECCTTSC-SSSCCCTTCTGGGSCGGGCCEEEECSHHHHH
T ss_pred -ccccEEecCcchhhhhHHHHHHHHHh--cCeEEEEEEEEeeccccch-hccCCCcccCccccchhhcccCCCCChHHHH
Confidence 13689999999999999999999998 7999999999999999853 444332 1355678999876642
Q ss_pred -cchhhhhhhhccccCCCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCC--CcEEecCCCCcccccc
Q 015441 270 -RHVPEIEQGLTGFASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHE--EFVKLLEKGVVPRTHN 346 (406)
Q Consensus 270 -~h~pEi~~~l~~i~~~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~--~fV~v~~~~~~P~~~~ 346 (406)
+.+||+.. +++.+|+|||+++||+.+++++|+++++.|||+++|+++.++. -.+.+.+++ .-+ .+
T Consensus 216 ~kVlPeL~g----------kltg~avRVPv~~~s~~dlt~~lek~~t~eei~~~lk~a~~g~lkgil~yte~~-~VS-~D 283 (332)
T 3pym_A 216 GKVLPELQG----------KLTGMAFRVPTVDVSVVDLTVKLNKETTYDEIKKVVKAAAEGKLKGVLGYTEDA-VVS-SD 283 (332)
T ss_dssp HHHSGGGTT----------SEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSC-CCG-GG
T ss_pred HHhhhhhcC----------CEEEEEEEcCCCCcEeeEEEEEECCcCCHHHHHHHHHHhccCccCceeEEEcCC-eEe-ec
Confidence 23455543 6999999999999999999999999999999999999985432 134454432 111 12
Q ss_pred ccCCCc-EEE----EEEEeCcCCeEEEEEEehhhhHhHHHHHHHHHHHH
Q 015441 347 VRGSNY-CLM----NVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIM 390 (406)
Q Consensus 347 v~g~n~-~~v----~~~~~~~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~ 390 (406)
-.|..+ +-+ +...+ .+-+-+++--|| -.|=+-+-+..+..|
T Consensus 284 f~~~~~ssi~d~~~~~~~~--~~~vk~~~WYDN-E~gys~r~~dl~~~~ 329 (332)
T 3pym_A 284 FLGDSHSSIFDASAGIQLS--PKFVKLVSWYDN-EYGYSTRVVDLVEHV 329 (332)
T ss_dssp GTTCCCSEEEEGGGCEEEE--TTEEEEEEEECT-THHHHHHHHHHHHHH
T ss_pred cCCCCcceEEccccccccC--CCEEEEEEEECC-ccchHHHHHHHHHHH
Confidence 222222 111 11111 233447777899 466666666666655
No 42
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=99.97 E-value=2.7e-31 Score=261.82 Aligned_cols=289 Identities=11% Similarity=0.149 Sum_probs=203.5
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEecc-CcCC-----ccccccccCccc---------------cCCCcccc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTAD-RKAG-----QSIGSVFPHLIS---------------QDLPTMVA 121 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~-~~~G-----~~i~~v~p~l~~---------------~~~~~~~~ 121 (406)
++||||+| .|+|||.++|.+.+++.+|++++++. .+.. .+++++|+.|.+ +.+..++.
T Consensus 3 ~~kv~ING-fGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~~v~~~~~~~l~i~Gk~I~v~~e 81 (337)
T 3v1y_O 3 KIKIGING-FGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGI 81 (337)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECTTSCHHHHHHHHHCCTTTCCCCSSCEEEEETTEEEETTEEEEEECC
T ss_pred ceEEEEEC-CChHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhhhccCCCcccCceEEEcCCcEEEECCEEEEEEEe
Confidence 47999999 99999999999998899999999975 2211 256777777654 11222222
Q ss_pred cCcc--cCC--CCCEEEEcCCCcchHHHHhh-CCCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccch
Q 015441 122 VKDA--DFS--NVDAVFCCLPHGTTQEIIKG-LPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISR 196 (406)
Q Consensus 122 ~~~~--~~~--~vDvVF~al~~~~s~~~~~~-l~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~ 196 (406)
.++. +|. ++|+||+|+|.+.+++.+++ +++|++.|.+|++. . ++|+.+|++|.+.. .
T Consensus 82 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps--~---------d~p~vV~gVN~~~~-~------ 143 (337)
T 3v1y_O 82 RNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPS--K---------DAPMFVCGVNEDKY-T------ 143 (337)
T ss_dssp SSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCC--S---------SSCBCCTTTTGGGC-C------
T ss_pred cCcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCC--C---------CCCeECCCCCHHHc-C------
Confidence 2222 354 89999999999999999976 67887534455542 1 36888888887653 1
Q ss_pred hhccCCcEEecCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhccc------HHHHhcCcccccCCcc-
Q 015441 197 EDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANL------YSEIAEGIYSYGVTRH- 269 (406)
Q Consensus 197 ~~i~~~~iVanPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~------~~e~~~ni~py~~~~h- 269 (406)
.+.+|||||+|+|++++++|+||+++ |+|+++.|+|+|++||+|+. .|..+ .++++.|+.|+..+.-
T Consensus 144 ---~~~~IISnasCTTn~Lap~lkvL~d~--fGI~~g~mTTvha~T~~q~~-~Dg~~~kd~r~~r~~a~NiIP~~tGaak 217 (337)
T 3v1y_O 144 ---SDIDIVSNASCTTNCLAPLAKVIHDN--FGIIEGLMTTVHAITATQKT-VDGPSSKDWRGGRAASFNIIPSSTGAAK 217 (337)
T ss_dssp ---TTCCEEECCCHHHHHHHHHHHHHHHH--HCEEEEEEEEEECCCTTSBS-SSCCCTTCGGGGSBGGGCCEEEECCHHH
T ss_pred ---CCCcEEecCchhhhhHHHHHHHHHHh--cCeEEEEEeeeeeccchhhh-ccCCccccccccccccceeecCCCChHH
Confidence 13689999999999999999999998 79999999999999999753 44332 1356789999876542
Q ss_pred ---cchhhhhhhhccccCCCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCC--CcEEecCCCCcccc
Q 015441 270 ---RHVPEIEQGLTGFASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHE--EFVKLLEKGVVPRT 344 (406)
Q Consensus 270 ---~h~pEi~~~l~~i~~~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~--~fV~v~~~~~~P~~ 344 (406)
+.+||+.. +++.+|+|||+++||+.+++++|+++++.|||+++|+++.++. -.+.+.+++ .-+
T Consensus 218 av~kVlPeL~g----------kltg~avRVPv~~~s~~dlt~~lek~~t~eei~~~lk~a~~g~lkgil~yte~~-~VS- 285 (337)
T 3v1y_O 218 AVGKVLPDLNG----------KLTGMSFRVPTVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEED-LVS- 285 (337)
T ss_dssp HHHHHSGGGTT----------SEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTBTTEEEECSC-CCG-
T ss_pred HHHHhccccCC----------cEEEEEEEcCCCCcEEEEEEEEECCCCcHHHHHHHHHHhccCccCCeeEEEcCC-EEe-
Confidence 23455433 6999999999999999999999999999999999999985432 134444432 111
Q ss_pred ccccCCCc-EEE----EEEEeCcCCeEEEEEEehhhhHhHHHHHHHHHHHHh
Q 015441 345 HNVRGSNY-CLM----NVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIML 391 (406)
Q Consensus 345 ~~v~g~n~-~~v----~~~~~~~~~~~~~~~v~DNL~KGAAgqAVQ~~nl~~ 391 (406)
.+-.|..+ +-+ ++..+ .+-+-+++--|| -.|=+-+-+..+..|.
T Consensus 286 ~Df~~~~~ssi~d~~~~~~~~--~~~vk~~~WYDN-E~gys~r~~dl~~~~~ 334 (337)
T 3v1y_O 286 TDFVGDSRSSIFDAKAGIALN--DNFVKLVAWYDN-EWGYSNRVIDLIRHMA 334 (337)
T ss_dssp GGGTTCCCSEEEETTTCEEEE--TTEEEEEEEECT-THHHHHHHHHHHHHHH
T ss_pred eccCCCCcceEEecccCeEEC--CCEEEEEEEECC-ccchHHHHHHHHHHHh
Confidence 12222222 111 11111 233457777899 4677777777776664
No 43
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=99.97 E-value=2e-31 Score=264.18 Aligned_cols=292 Identities=13% Similarity=0.100 Sum_probs=205.5
Q ss_pred CccEEEEECcccHHHHHHHHH----HHcCCCceEEEEecc-CcCC-----ccccccccCccc------------------
Q 015441 62 KQVRIGLLGASGYTGAEIVRL----LANHPYFGIKLMTAD-RKAG-----QSIGSVFPHLIS------------------ 113 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrl----L~~hp~~elv~l~s~-~~~G-----~~i~~v~p~l~~------------------ 113 (406)
|++||||+| .|+|||.++|. +.+++.+|++++++. .+.. .+++++|+.|.+
T Consensus 1 m~~kv~ING-FGrIGr~v~Ra~~~~~~~~~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~~~v~~~~~~~~~~~~~~l~ 79 (359)
T 3ids_C 1 MPIKVGING-FGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTLV 79 (359)
T ss_dssp CCEEEEEEC-TTHHHHHHHHHHHHTTCBTTTEEEEEEECSSCCHHHHHHHHHEETTTEECSSCEEEECSCTTSSSCCEEE
T ss_pred CceEEEEEC-CChHHHHHHHHhHHHHhcCCCcEEEEEecCCCCHHHHHHHhcccCCCCCEeeEEEecccccccCCCCEEE
Confidence 568999999 99999999999 456788999999973 2211 256666665542
Q ss_pred ---cCCCccc-ccCcc--cCC--CCCEEEEcCCCcchHHHHhh-CCCCCEEEEcCCcccCCCccchhhhcCCCCCCccch
Q 015441 114 ---QDLPTMV-AVKDA--DFS--NVDAVFCCLPHGTTQEIIKG-LPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQ 184 (406)
Q Consensus 114 ---~~~~~~~-~~~~~--~~~--~vDvVF~al~~~~s~~~~~~-l~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn 184 (406)
+.+..++ ..++. +|. ++|+||+|+|.+.+++.++. +++|++.|.+|++. ++ ++|+++|++|
T Consensus 80 inGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps--~~--------d~p~vV~gVN 149 (359)
T 3ids_C 80 VNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPA--SG--------GAKTLVMGVN 149 (359)
T ss_dssp ETTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCC--BS--------SCEECCTTTT
T ss_pred ECCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCC--CC--------CCCeEEeccC
Confidence 1222222 22223 353 89999999999999999976 68888655567654 22 3688888887
Q ss_pred hhhhccccccchhhccCCcEEecCCChHHHHHHHHHHH-HHccCCCcceEEEEEeeccCccCcchhhcccH------HHH
Q 015441 185 KEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPL-IQANLIQYRNIIIDAKSGVSGAGRGAKEANLY------SEI 257 (406)
Q Consensus 185 ~~~vyglpE~~~~~i~~~~iVanPgC~tta~~l~L~PL-~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~------~e~ 257 (406)
.+..-. ...+|||||+|+|++++++|+|| +++ |+|+++.|+|+|++||.+ +.+|..+. +.+
T Consensus 150 ~~~~~~---------~~~~IISNaSCTTn~Lap~lkvL~~d~--fGI~~g~mTTvha~T~tQ-~~vD~~~~kd~r~~r~a 217 (359)
T 3ids_C 150 HHEYNP---------SEHHVVSNASCTTNCLAPIVHVLVKEG--FGVQTGLMTTIHSYTATQ-KTVDGVSVKDWRGGRAA 217 (359)
T ss_dssp GGGCCT---------TTCSEEECCCHHHHHHHHHHHHHHHTT--CCCSEEEEEEEEECCTTS-BSSSCCCTTCTGGGSBG
T ss_pred HHHcCC---------CCCCEEECCchHhhhHHHhhhhhhhcc--CCeEEEEEeeeeeccchh-hhhcCCccccccccccC
Confidence 764310 13689999999999999999999 988 899999999999999985 44554331 346
Q ss_pred hcCcccccCCcc----cchhhhhhhhccccCCCceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHcCCC--C
Q 015441 258 AEGIYSYGVTRH----RHVPEIEQGLTGFASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISYEHE--E 331 (406)
Q Consensus 258 ~~ni~py~~~~h----~h~pEi~~~l~~i~~~~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y~~~--~ 331 (406)
+.|+.|...+.- +.+||+.. +++.+|+|||+++||+.+++++|+++++.|||+++|+++.++. -
T Consensus 218 a~NiIP~~tGaakav~kVlPeL~g----------kltg~avRVPv~~vs~~dlt~~lek~~t~eei~~~lk~A~~g~lkg 287 (359)
T 3ids_C 218 AVNIIPSTTGAAKAVGMVIPSTQG----------KLTGMSFRVPTPDVSVVDLTFTAARDTSIQEIDAALKRASKTYMKG 287 (359)
T ss_dssp GGCCEEEECSHHHHHHHHSGGGTT----------SEEEEEEEESCSSCEEEEEEEECSSCCCHHHHHHHHHHHHHTTTTT
T ss_pred cceeEccCCchHHHHhhhchhhcC----------ceEEEEEEcCCCCcEEEEEEEEECCCCCHHHHHHHHHHhccCccCC
Confidence 789999876642 23566543 6999999999999999999999999999999999999985432 1
Q ss_pred cEEecCCCCccccccccCCCcEEEEEEEe------Cc----CCeEEEEEEehhhhHhHHHHHHHHHHHHhC
Q 015441 332 FVKLLEKGVVPRTHNVRGSNYCLMNVFPD------RI----PGRAIIISVIDNLVKGASGQALQNLNIMLG 392 (406)
Q Consensus 332 fV~v~~~~~~P~~~~v~g~n~~~v~~~~~------~~----~~~~~~~~v~DNL~KGAAgqAVQ~~nl~~g 392 (406)
.+.+.+++ .-. .+-.|..+-.| .| -. .+-+-+++--|| -.|=+-+-|..+..|..
T Consensus 288 il~yte~~-~VS-~Df~~~~~ssi---~d~~~t~~~~~~~~~~~vk~~~WYDN-E~Gys~r~vdl~~~~~~ 352 (359)
T 3ids_C 288 ILGYTDEE-LVS-ADFINDNRSSI---YDSKATLQNNLPKERRFFKIVSWYDN-EWGYSHRVVDLVRHMAS 352 (359)
T ss_dssp TEEEECSC-CCG-GGGTTCCSSEE---EEHHHHHHSSCTTCSSEEEEEEEECT-THHHHHHHHHHHHHHHH
T ss_pred ceeEecCC-EEe-eecCCCCccee---EecccceeecccCCCCEEEEeEEECC-CcchHHHHHHHHHHHHh
Confidence 34554432 111 12223322111 12 11 233457778899 46777777777766643
No 44
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=99.95 E-value=5.4e-27 Score=233.08 Aligned_cols=226 Identities=12% Similarity=0.144 Sum_probs=166.9
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc--CCcccc----ccccCcccc-------CCCcccccCcccCC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK--AGQSIG----SVFPHLISQ-------DLPTMVAVKDADFS 128 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~--~G~~i~----~v~p~l~~~-------~~~~~~~~~~~~~~ 128 (406)
||+||||+|+ |++|++++++|.+||++++++++++.. +++... .+|+.|.+. .+....+. ++.+.
T Consensus 1 M~irVgIiG~-G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~-~~l~~ 78 (334)
T 2czc_A 1 MKVKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTL-NDLLE 78 (334)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBH-HHHHT
T ss_pred CCcEEEEEeE-hHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcH-HHhcc
Confidence 4689999996 999999999999999999999997531 111111 344444321 11111111 11235
Q ss_pred CCCEEEEcCCCcchHHHHhh-CCCCCEEEEcCCcccCCCccchhhhcCC-CCCCccchhhhhccccccchhhccCCcEEe
Q 015441 129 NVDAVFCCLPHGTTQEIIKG-LPKSLKIVDLSADFRLRDVSEYEEWYGQ-PHIAPDLQKEAVYGLTEISREDIKNARLVA 206 (406)
Q Consensus 129 ~vDvVF~al~~~~s~~~~~~-l~~G~~VIDlSa~fRl~~~~~~~~~y~~-~~~~Pevn~~~vyglpE~~~~~i~~~~iVa 206 (406)
++|+||+|+|++...+.+++ +++|++|| +++++ +++ -. +..+|+ +|.++++++++|+
T Consensus 79 ~vDvV~~aTp~~~h~~~a~~~l~aGk~Vi-~sap~--~~d-------~~~~~~v~~-----------vn~~~~~~~~ii~ 137 (334)
T 2czc_A 79 KVDIIVDATPGGIGAKNKPLYEKAGVKAI-FQGGE--KAD-------VAEVSFVAQ-----------ANYEAALGKNYVR 137 (334)
T ss_dssp TCSEEEECCSTTHHHHHHHHHHHHTCEEE-ECTTS--CGG-------GSSEEECHH-----------HHGGGGTTCSEEE
T ss_pred CCCEEEECCCccccHHHHHHHHHcCCceE-eeccc--ccc-------cccceEEec-----------cCHHHHhhCCcEE
Confidence 89999999999998888875 47899999 56554 210 01 223333 4555666678999
Q ss_pred cCCChHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhcccHHHHhcCcccc-cCCcccchhhhhhhhccccCC
Q 015441 207 NPGCYPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLYSEIAEGIYSY-GVTRHRHVPEIEQGLTGFASS 285 (406)
Q Consensus 207 nPgC~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~~e~~~ni~py-~~~~h~h~pEi~~~l~~i~~~ 285 (406)
||+|+|+++++++++|++. +++..++++|++||.++.+ ++...|+.|| +...| |.+++.+.+ +
T Consensus 138 ~~~C~t~~l~P~~~~l~~~----I~~g~i~ti~a~s~~~~~~------r~~~~niiP~i~~~~g-~~~~i~~~l----~- 201 (334)
T 2czc_A 138 VVSCNTTGLVRTLSAIREY----ADYVYAVMIRRAADPNDTK------RGPINAIKPTVEVPSH-HGPDVQTVI----P- 201 (334)
T ss_dssp ECCHHHHHHHHHHHHHGGG----EEEEEEEEEEESSCTTCCS------CCCSSCCEECCSSSCT-HHHHHTTTS----C-
T ss_pred ecCcHHHHHHHHHHHHHHH----hccccEEEEEEecCccccc------cChhhcEEeccCCCCc-hhhhhheEE----E-
Confidence 9999999999999999764 6888999999999986543 2445799999 33444 678877764 2
Q ss_pred CceEEEEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHHHc
Q 015441 286 KVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKISY 327 (406)
Q Consensus 286 ~~~v~~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~~y 327 (406)
+.++.+|+|||+++||+.+++++++++++.+|++++|++++
T Consensus 202 -l~l~~~~~rVPv~~~~~~~~~~~~~~~~~~e~i~~~~~~~~ 242 (334)
T 2czc_A 202 -INIETMAFVVPTTLMHVHSVMVELKKPLTKDDVIDIFENTT 242 (334)
T ss_dssp -CCEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHTST
T ss_pred -EEEEEEEEEcCCCceEEEEEEEEECCCCCHHHHHHHHHhcc
Confidence 56999999999999999999999999999999999999983
No 45
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=99.49 E-value=2.7e-14 Score=140.46 Aligned_cols=216 Identities=18% Similarity=0.295 Sum_probs=133.7
Q ss_pred CccEEEEECcccHHHHHHHHHHHc-CCCceEEEEeccCc-C-CccccccccCccccCCCccccc-CcccCCCCCEEEEcC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLAN-HPYFGIKLMTADRK-A-GQSIGSVFPHLISQDLPTMVAV-KDADFSNVDAVFCCL 137 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~-hp~~elv~l~s~~~-~-G~~i~~v~p~l~~~~~~~~~~~-~~~~~~~vDvVF~al 137 (406)
+++||+|+| +|++|+.+++.|.+ +|.++++++++++. . ++.+...++.-.. . ..++.+ +..++.++|+||+|+
T Consensus 3 ~~irVaIIG-~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~-~-~~~e~ll~~~~~~~iDvV~~at 79 (312)
T 1nvm_B 3 QKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTT-Y-AGVEGLIKLPEFADIDFVFDAT 79 (312)
T ss_dssp SCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEE-S-SHHHHHHHSGGGGGEEEEEECS
T ss_pred CCCEEEEEc-CcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcc-c-CCHHHHHhccCCCCCcEEEECC
Confidence 458999999 89999999999976 99999999998652 2 3443322221000 0 011111 111235789999999
Q ss_pred CCcchHHHHhh-CCC--CCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchhhccC---CcEEecCCCh
Q 015441 138 PHGTTQEIIKG-LPK--SLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKN---ARLVANPGCY 211 (406)
Q Consensus 138 ~~~~s~~~~~~-l~~--G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~~i~~---~~iVanPgC~ 211 (406)
|+....+++.. +++ |+.|||++.+++- + |+.||+|.+++.+ .+++++|||.
T Consensus 80 p~~~h~~~a~~al~a~~Gk~Vi~ekp~~~g------------~-----------~~~p~v~~~~~~~~~~~~lva~~g~~ 136 (312)
T 1nvm_B 80 SASAHVQNEALLRQAKPGIRLIDLTPAAIG------------P-----------YCVPVVNLEEHLGKLNVNMVTCGGQA 136 (312)
T ss_dssp CHHHHHHHHHHHHHHCTTCEEEECSTTCSS------------C-----------BCCHHHHTTTTTTCSEEECCCHHHHH
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEcCccccc------------c-----------cccCccCHHHHHhccCCcEEEeCCcc
Confidence 99888888875 477 9999999988741 2 4455555555433 3678999997
Q ss_pred HHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhc-ccHHHHhcCcccccCCcccchhhhhhhhccccCCCceEE
Q 015441 212 PTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEA-NLYSEIAEGIYSYGVTRHRHVPEIEQGLTGFASSKVTVS 290 (406)
Q Consensus 212 tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~-~~~~e~~~ni~py~~~~h~h~pEi~~~l~~i~~~~~~v~ 290 (406)
+..++.++.++++.. ..+ +++++++.| +|...... ..+.++.. .+| +.++.....+.-+.
T Consensus 137 ~ipl~~a~~~~~~~~---~~~-iv~~i~sgs-~G~~~~~~l~e~~~~~~--~ai------------~~~gg~~~~k~il~ 197 (312)
T 1nvm_B 137 TIPMVAAVSRVAKVH---YAE-IVASISSKS-AGPGTRANIDEFTETTS--KAI------------EVIGGAAKGKAIII 197 (312)
T ss_dssp HHHHHHHHHTTSCEE---EEE-EEEEEEGGG-SCHHHHTCHHHHHHHHH--HHH------------HHTTCCSSEEEEEE
T ss_pred cchHHHHhhhhccch---hHh-Hhhhhhccc-cCCCcccchhhHHHHHH--HHH------------HHhhhccCCCcEEE
Confidence 665555665544321 122 578888777 45432211 01222211 111 11111111123477
Q ss_pred EEEEEeeecceeEEEEEEEeCCCCCHHHHHHHHHH
Q 015441 291 FTPHLMPMIRGMQSTIYVEMAPGVTIEDLYQQLKI 325 (406)
Q Consensus 291 ~t~~rVPv~rG~~~ti~v~l~~~~s~eev~~~l~~ 325 (406)
|+|+..|++ +..++|+.++ .++.+++.+.-.+
T Consensus 198 ~~p~~~p~~--~~~tv~~~~~-~~~~~~~~~~~~~ 229 (312)
T 1nvm_B 198 MNPAEPPLI--MRDTVYVLSA-AADQAAVAASVAE 229 (312)
T ss_dssp EECCSSCCC--EEEEEEEEES-SCCHHHHHHHHHH
T ss_pred EecCCCCcc--cceeEEEEeC-CCCHHHHHHHHHH
Confidence 999999999 8889999997 7787776554443
No 46
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=98.36 E-value=8.8e-08 Score=97.02 Aligned_cols=192 Identities=11% Similarity=0.123 Sum_probs=102.4
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCc-eEEEEeccCc-CCcccccccc-----Ccc--ccCCCcccccCcccCC--CCC
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYF-GIKLMTADRK-AGQSIGSVFP-----HLI--SQDLPTMVAVKDADFS--NVD 131 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~-elv~l~s~~~-~G~~i~~v~p-----~l~--~~~~~~~~~~~~~~~~--~vD 131 (406)
|+||+|+|| |++|+.+++.|.+++++ ..+.+++++. ..+.+...++ .+. ..++.....+ .+.+. ++|
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l-~~~l~~~~~D 78 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEEL-VALINEVKPQ 78 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHH-HHHHHHHCCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHH-HHHHHhhCCC
Confidence 469999998 99999999999998875 3444554432 1111111110 010 0111111111 11123 389
Q ss_pred EEEEcCCCcchHHHHhh-CCCCCEEEEcCCcccCCCccchhhhcCCCCCCccchhhhhccccccchhhccCCcEEecCCC
Q 015441 132 AVFCCLPHGTTQEIIKG-LPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGC 210 (406)
Q Consensus 132 vVF~al~~~~s~~~~~~-l~~G~~VIDlSa~fRl~~~~~~~~~y~~~~~~Pevn~~~vyglpE~~~~~i~~~~iVanPgC 210 (406)
+||.|+|......++.+ +++|+.+||++. ++-.+...| +.... .-+.|.-+ -.+..++.++||
T Consensus 79 vVin~ag~~~~~~v~~a~l~~g~~vvD~a~-~~~~~~~~~-----------~~~~~--~~l~~~a~--~aG~~~i~g~G~ 142 (405)
T 4ina_A 79 IVLNIALPYQDLTIMEACLRTGVPYLDTAN-YEHPDLAKF-----------EYKEQ--WAFHDRYK--EKGVMALLGSGF 142 (405)
T ss_dssp EEEECSCGGGHHHHHHHHHHHTCCEEESSC-CBCTTCSCB-----------CSHHH--HTTHHHHH--HHTCEEEECCBT
T ss_pred EEEECCCcccChHHHHHHHHhCCCEEEecC-CCCcccchh-----------hhHHH--HHHHHHHH--HhCCEEEEcCCC
Confidence 99999998776666665 478999999654 442211001 00000 01111111 124678999999
Q ss_pred hHHHHHHHHHHHHHccCCCcceEEEEEeeccCccCcchhhcccH------HHHhcCcccccCCcccchhhh
Q 015441 211 YPTSIQLPLVPLIQANLIQYRNIIIDAKSGVSGAGRGAKEANLY------SEIAEGIYSYGVTRHRHVPEI 275 (406)
Q Consensus 211 ~tta~~l~L~PL~~~~l~~i~~i~v~t~~gvSGaG~~~~~~~~~------~e~~~ni~py~~~~h~h~pEi 275 (406)
.+....+...++.++.+-.++.+.+.. ++|++....-.+.+ .+..++...|..+.++++|-.
T Consensus 143 ~PG~~~l~a~~~~~~~~~~i~~i~i~~---~~gg~~g~~~~~~~sp~~~~~~~~~~~~~~~~G~~~~~~~~ 210 (405)
T 4ina_A 143 DPGVTNVFCAYAQKHYFDEIHEIDILD---CNAGDHGYPFATNFNPEINLREVSSKGRYWENGEWIETEPM 210 (405)
T ss_dssp TTBHHHHHHHHHHHHTCSEEEEEEEEE---EECCBCSSSSCCSSCHHHHHHHTTSCEEEEETTEEEEESTT
T ss_pred CccHHHHHHHHHHHhccCcccEEEEEE---ecCCCCCccceeeeCHHHHHHHhcCCcEEEECCEEEEecCC
Confidence 998887877787765333466666533 33332211111112 355556666667777666533
No 47
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=98.33 E-value=2.8e-07 Score=88.75 Aligned_cols=92 Identities=16% Similarity=0.177 Sum_probs=64.9
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc---CCccccccccCccccCCCcccccCcccCCCCCEEEEcCCC
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK---AGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~---~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~ 139 (406)
|+||+|+||+|++|+++++++.++|+++++++.++.. .|+.+.++.. +. ..++...++ ++.+.++|+||.++++
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g-~~-~gv~v~~dl-~~ll~~~DVVIDfT~p 83 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLG-KQ-TGVALTDDI-ERVCAEADYLIDFTLP 83 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTT-CC-CSCBCBCCH-HHHHHHCSEEEECSCH
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhC-CC-CCceecCCH-HHHhcCCCEEEEcCCH
Confidence 5899999999999999999999999999999887542 4554444321 11 122212111 1123478999999998
Q ss_pred cchHHHHhh-CCCCCEEEE
Q 015441 140 GTTQEIIKG-LPKSLKIVD 157 (406)
Q Consensus 140 ~~s~~~~~~-l~~G~~VID 157 (406)
..+.+.++. +++|+.||-
T Consensus 84 ~a~~~~~~~al~~G~~vVi 102 (272)
T 4f3y_A 84 EGTLVHLDAALRHDVKLVI 102 (272)
T ss_dssp HHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHcCCCEEE
Confidence 888887775 478887773
No 48
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.30 E-value=5.4e-07 Score=73.51 Aligned_cols=96 Identities=21% Similarity=0.238 Sum_probs=60.7
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCcc--ccCCCcccccCcccCCCCCEEEEcCC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLI--SQDLPTMVAVKDADFSNVDAVFCCLP 138 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~--~~~~~~~~~~~~~~~~~vDvVF~al~ 138 (406)
++++|+|+|+ |++|+.+++.|..+...+++.+. ++.. -..+. ...+. ..++.....+ .+.+.++|+||.|+|
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~-r~~~~~~~~~--~~~~~~~~~d~~~~~~~-~~~~~~~d~vi~~~~ 78 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVAD-HDLAALAVLN--RMGVATKQVDAKDEAGL-AKALGGFDAVISAAP 78 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEE-SCHHHHHHHH--TTTCEEEECCTTCHHHH-HHHTTTCSEEEECSC
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEe-CCHHHHHHHH--hCCCcEEEecCCCHHHH-HHHHcCCCEEEECCC
Confidence 4579999999 99999999999887656765554 3211 01111 00000 0111111111 122468999999999
Q ss_pred CcchHHHHhhC-CCCCEEEEcCCcc
Q 015441 139 HGTTQEIIKGL-PKSLKIVDLSADF 162 (406)
Q Consensus 139 ~~~s~~~~~~l-~~G~~VIDlSa~f 162 (406)
......+.... +.|++++|++++.
T Consensus 79 ~~~~~~~~~~~~~~g~~~~~~~~~~ 103 (118)
T 3ic5_A 79 FFLTPIIAKAAKAAGAHYFDLTEDV 103 (118)
T ss_dssp GGGHHHHHHHHHHTTCEEECCCSCH
T ss_pred chhhHHHHHHHHHhCCCEEEecCcH
Confidence 88777777664 7899999998864
No 49
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=98.29 E-value=8.4e-07 Score=86.02 Aligned_cols=98 Identities=12% Similarity=0.133 Sum_probs=65.5
Q ss_pred cccCCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc---CCccccccccCccccCCCcccccCcccCCCCCEEE
Q 015441 58 QKSEKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK---AGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVF 134 (406)
Q Consensus 58 ~~~~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~---~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF 134 (406)
+.+.+++||+|+||+|.+|+.+++.+.++|+++|+++.++.. .|+.+.+... +....++...++ ++.+.++|+|+
T Consensus 16 ~~m~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G-~~~~gv~v~~dl-~~ll~~aDVvI 93 (288)
T 3ijp_A 16 TQGPGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIG-SDFLGVRITDDP-ESAFSNTEGIL 93 (288)
T ss_dssp -----CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTT-CSCCSCBCBSCH-HHHTTSCSEEE
T ss_pred hhccCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhc-cCcCCceeeCCH-HHHhcCCCEEE
Confidence 344567999999999999999999999999999999987643 4555444211 111122222222 22246899999
Q ss_pred EcCCCcchHHHHhh-CCCCCEEEE
Q 015441 135 CCLPHGTTQEIIKG-LPKSLKIVD 157 (406)
Q Consensus 135 ~al~~~~s~~~~~~-l~~G~~VID 157 (406)
.++.+....+.+.. +++|+.||-
T Consensus 94 DFT~p~a~~~~~~~~l~~Gv~vVi 117 (288)
T 3ijp_A 94 DFSQPQASVLYANYAAQKSLIHII 117 (288)
T ss_dssp ECSCHHHHHHHHHHHHHHTCEEEE
T ss_pred EcCCHHHHHHHHHHHHHcCCCEEE
Confidence 99988777777765 477887763
No 50
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=98.05 E-value=5.3e-06 Score=79.73 Aligned_cols=93 Identities=13% Similarity=0.124 Sum_probs=61.1
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc---CCccccccccCccccCCCcccccCcccCCCCCEEEEcCC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK---AGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLP 138 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~---~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~ 138 (406)
+++||+|+|++|.+|+.+++.+.++|.++++++.++.. .|+.+.+... +....++...++ ++.+.++|+|+.++.
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g-~~~~~v~~~~dl-~~~l~~~DvVIDft~ 81 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAG-AGKTGVTVQSSL-DAVKDDFDVFIDFTR 81 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSS-SSCCSCCEESCS-TTTTTSCSEEEECSC
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcC-CCcCCceecCCH-HHHhcCCCEEEEcCC
Confidence 45899999999999999999999899999998876543 1333332211 011112212222 223457899997776
Q ss_pred CcchHHHHhh-CCCCCEEE
Q 015441 139 HGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 139 ~~~s~~~~~~-l~~G~~VI 156 (406)
+....+.+.. +++|+.||
T Consensus 82 p~~~~~~~~~a~~~G~~vV 100 (273)
T 1dih_A 82 PEGTLNHLAFCRQHGKGMV 100 (273)
T ss_dssp HHHHHHHHHHHHHTTCEEE
T ss_pred hHHHHHHHHHHHhCCCCEE
Confidence 6666677665 47898776
No 51
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.96 E-value=1.7e-05 Score=76.99 Aligned_cols=87 Identities=20% Similarity=0.302 Sum_probs=60.1
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT 142 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s 142 (406)
++||+|+| .|.+|+.+++.|.++|+++++++.++... +... + +.....+.++ .+..++|+||.|+|+..-
T Consensus 9 ~irv~IIG-~G~iG~~~~~~l~~~~~~elvav~d~~~~--~~~~-~----g~~~~~~~~l--~~~~~~DvViiatp~~~h 78 (304)
T 3bio_A 9 KIRAAIVG-YGNIGRYALQALREAPDFEIAGIVRRNPA--EVPF-E----LQPFRVVSDI--EQLESVDVALVCSPSREV 78 (304)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHCTTEEEEEEECC----------C----CTTSCEESSG--GGSSSCCEEEECSCHHHH
T ss_pred CCEEEEEC-ChHHHHHHHHHHhcCCCCEEEEEEcCCHH--HHHH-c----CCCcCCHHHH--HhCCCCCEEEECCCchhh
Confidence 58999999 69999999999999999999998875432 1111 1 1111112221 112579999999998887
Q ss_pred HHHHhh-CCCCCEEEEcC
Q 015441 143 QEIIKG-LPKSLKIVDLS 159 (406)
Q Consensus 143 ~~~~~~-l~~G~~VIDlS 159 (406)
.+++.. +++|+.|||.+
T Consensus 79 ~~~~~~al~aG~~Vi~ek 96 (304)
T 3bio_A 79 ERTALEILKKGICTADSF 96 (304)
T ss_dssp HHHHHHHHTTTCEEEECC
T ss_pred HHHHHHHHHcCCeEEECC
Confidence 787765 58899999754
No 52
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.86 E-value=6.4e-06 Score=81.85 Aligned_cols=94 Identities=19% Similarity=0.185 Sum_probs=57.4
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccc--cCCCcccccCcccCCCCCEEEEcCC
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLIS--QDLPTMVAVKDADFSNVDAVFCCLP 138 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~--~~~~~~~~~~~~~~~~vDvVF~al~ 138 (406)
.+++||+|+|| |++|+.+++.|.++.++.+ +++.. .++..+.+.... .+......+ .+.+.++|+|+.|+|
T Consensus 14 g~~mkilvlGa-G~vG~~~~~~L~~~~~v~~---~~~~~--~~~~~~~~~~~~~~~d~~d~~~l-~~~~~~~DvVi~~~p 86 (365)
T 3abi_A 14 GRHMKVLILGA-GNIGRAIAWDLKDEFDVYI---GDVNN--ENLEKVKEFATPLKVDASNFDKL-VEVMKEFELVIGALP 86 (365)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHTTTSEEEE---EESCH--HHHHHHTTTSEEEECCTTCHHHH-HHHHTTCSEEEECCC
T ss_pred CCccEEEEECC-CHHHHHHHHHHhcCCCeEE---EEcCH--HHHHHHhccCCcEEEecCCHHHH-HHHHhCCCEEEEecC
Confidence 44569999998 9999999999987654433 22211 111111111110 111111111 112468999999999
Q ss_pred CcchHHHHhhC-CCCCEEEEcCCc
Q 015441 139 HGTTQEIIKGL-PKSLKIVDLSAD 161 (406)
Q Consensus 139 ~~~s~~~~~~l-~~G~~VIDlSa~ 161 (406)
......+++++ ++|+.+||+|.+
T Consensus 87 ~~~~~~v~~~~~~~g~~yvD~s~~ 110 (365)
T 3abi_A 87 GFLGFKSIKAAIKSKVDMVDVSFM 110 (365)
T ss_dssp GGGHHHHHHHHHHHTCEEEECCCC
T ss_pred CcccchHHHHHHhcCcceEeeecc
Confidence 98777788764 889999999853
No 53
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.73 E-value=8.5e-05 Score=72.63 Aligned_cols=86 Identities=20% Similarity=0.315 Sum_probs=60.7
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT 142 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s 142 (406)
++||+|+| +|.+|+.+++.|.++|+++++++.+++... .+. + + +....+. ++.+.++|+||.|+++..-
T Consensus 3 ~irV~IiG-~G~mG~~~~~~l~~~~~~elvav~d~~~~~-~~~-----~-g--v~~~~d~-~~ll~~~DvViiatp~~~h 71 (320)
T 1f06_A 3 NIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATL-DTK-----T-P--VFDVADV-DKHADDVDVLFLCMGSATD 71 (320)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCC-SSS-----S-C--EEEGGGG-GGTTTTCSEEEECSCTTTH
T ss_pred CCEEEEEe-ecHHHHHHHHHHhcCCCCEEEEEEcCCHHH-hhc-----C-C--CceeCCH-HHHhcCCCEEEEcCCcHHH
Confidence 58999999 699999999999999999999998765332 222 1 1 1111222 1122579999999998866
Q ss_pred HHHHh-hCCCCCEEEEcC
Q 015441 143 QEIIK-GLPKSLKIVDLS 159 (406)
Q Consensus 143 ~~~~~-~l~~G~~VIDlS 159 (406)
.+.+. .+++|+.||+-.
T Consensus 72 ~~~~~~al~aG~~Vv~ek 89 (320)
T 1f06_A 72 IPEQAPKFAQFACTVDTY 89 (320)
T ss_dssp HHHHHHHHTTTSEEECCC
T ss_pred HHHHHHHHHCCCEEEECC
Confidence 66554 468899988643
No 54
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.73 E-value=8.5e-05 Score=70.17 Aligned_cols=78 Identities=13% Similarity=0.098 Sum_probs=55.9
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT 142 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s 142 (406)
|+||+|+|+ |.+|+.+++++.+.++ +++++.++.... . + .++...+++ +.. ++|+++.++.+...
T Consensus 3 MmkI~ViGa-GrMG~~i~~~l~~~~~-eLva~~d~~~~~-~-------~---gv~v~~dl~-~l~-~~DVvIDft~p~a~ 67 (243)
T 3qy9_A 3 SMKILLIGY-GAMNQRVARLAEEKGH-EIVGVIENTPKA-T-------T---PYQQYQHIA-DVK-GADVAIDFSNPNLL 67 (243)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEECSSCC----------C---CSCBCSCTT-TCT-TCSEEEECSCHHHH
T ss_pred ceEEEEECc-CHHHHHHHHHHHhCCC-EEEEEEecCccc-c-------C---CCceeCCHH-HHh-CCCEEEEeCChHHH
Confidence 589999998 9999999999999999 999988765431 1 0 122222221 223 78999977777777
Q ss_pred HHHHhhCCCCCEEE
Q 015441 143 QEIIKGLPKSLKIV 156 (406)
Q Consensus 143 ~~~~~~l~~G~~VI 156 (406)
.+.++ +++|+.+|
T Consensus 68 ~~~~~-l~~g~~vV 80 (243)
T 3qy9_A 68 FPLLD-EDFHLPLV 80 (243)
T ss_dssp HHHHT-SCCCCCEE
T ss_pred HHHHH-HhcCCceE
Confidence 77777 77887666
No 55
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.64 E-value=7.6e-05 Score=67.79 Aligned_cols=74 Identities=24% Similarity=0.349 Sum_probs=43.8
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCcc--ccCCCcccccCcccCCCCCEEEEcCCC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLI--SQDLPTMVAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~--~~~~~~~~~~~~~~~~~vDvVF~al~~ 139 (406)
+|+||.|.||||++|+.|++.|.+.. .+++.+..+......+. +.+. ..|+.....+ ...+.++|+||.|++.
T Consensus 3 ~m~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~---~~~~~~~~Dl~d~~~~-~~~~~~~d~vi~~a~~ 77 (227)
T 3dhn_A 3 KVKKIVLIGASGFVGSALLNEALNRG-FEVTAVVRHPEKIKIEN---EHLKVKKADVSSLDEV-CEVCKGADAVISAFNP 77 (227)
T ss_dssp CCCEEEEETCCHHHHHHHHHHHHTTT-CEEEEECSCGGGCCCCC---TTEEEECCCTTCHHHH-HHHHTTCSEEEECCCC
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEcCcccchhcc---CceEEEEecCCCHHHH-HHHhcCCCEEEEeCcC
Confidence 35799999999999999999998765 57777653222111110 1111 1122111111 1224689999999876
Q ss_pred c
Q 015441 140 G 140 (406)
Q Consensus 140 ~ 140 (406)
.
T Consensus 78 ~ 78 (227)
T 3dhn_A 78 G 78 (227)
T ss_dssp -
T ss_pred C
Confidence 5
No 56
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=97.62 E-value=7.8e-05 Score=68.72 Aligned_cols=99 Identities=13% Similarity=0.155 Sum_probs=54.7
Q ss_pred cCCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCcc--ccCCCcccccCcccCCCCCEEEEcC
Q 015441 60 SEKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLI--SQDLPTMVAVKDADFSNVDAVFCCL 137 (406)
Q Consensus 60 ~~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~--~~~~~~~~~~~~~~~~~vDvVF~al 137 (406)
+.||++|.|.||||++|+.+++.|++....+++.+..+......+.. ..+. ..|+.....+ ...+.++|+||.|+
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~--~~~~~~~~Dl~d~~~~-~~~~~~~D~vv~~a 96 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP--TNSQIIMGDVLNHAAL-KQAMQGQDIVYANL 96 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCC--TTEEEEECCTTCHHHH-HHHHTTCSEEEEEC
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccccc--CCcEEEEecCCCHHHH-HHHhcCCCEEEEcC
Confidence 34467899999999999999999998765677766532221111100 0000 1122111111 12246899999888
Q ss_pred CCcch----HHHHhhC-CCC-CEEEEcCCc
Q 015441 138 PHGTT----QEIIKGL-PKS-LKIVDLSAD 161 (406)
Q Consensus 138 ~~~~s----~~~~~~l-~~G-~~VIDlSa~ 161 (406)
+.... +.+++.+ +.| .++|-.|+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~ 126 (236)
T 3qvo_A 97 TGEDLDIQANSVIAAMKACDVKRLIFVLSL 126 (236)
T ss_dssp CSTTHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCchhHHHHHHHHHHHHcCCCEEEEEecc
Confidence 75322 3344444 344 367767764
No 57
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.53 E-value=7.1e-05 Score=73.65 Aligned_cols=89 Identities=11% Similarity=0.239 Sum_probs=60.6
Q ss_pred CccEEEEECcccHHHH-HHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccC--CCCCEEEEcCC
Q 015441 62 KQVRIGLLGASGYTGA-EIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCCLP 138 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~-eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~al~ 138 (406)
||+||+|+| +|.+|+ ..++.|..+|.++++++.+++ ..+.+...+.. . ....+.++ ++.+ .++|+|+.|+|
T Consensus 1 M~~rvgiiG-~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~~~~~-~--~~~~~~~~-~~ll~~~~~D~V~i~tp 74 (349)
T 3i23_A 1 MTVKMGFIG-FGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAAPFKE-K--GVNFTADL-NELLTDPEIELITICTP 74 (349)
T ss_dssp CCEEEEEEC-CSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHHHHHT-T--TCEEESCT-HHHHSCTTCCEEEECSC
T ss_pred CeeEEEEEc-cCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHHhhCC-C--CCeEECCH-HHHhcCCCCCEEEEeCC
Confidence 679999999 799998 688888889999999999866 33333221100 0 11111111 1112 36899999999
Q ss_pred CcchHHHHhh-CCCCCEEE
Q 015441 139 HGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 139 ~~~s~~~~~~-l~~G~~VI 156 (406)
+..-.+++.+ +++|+.|+
T Consensus 75 ~~~h~~~~~~al~aGk~Vl 93 (349)
T 3i23_A 75 AHTHYDLAKQAILAGKSVI 93 (349)
T ss_dssp GGGHHHHHHHHHHTTCEEE
T ss_pred cHHHHHHHHHHHHcCCEEE
Confidence 9877777764 58898776
No 58
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.50 E-value=7.5e-05 Score=73.11 Aligned_cols=87 Identities=18% Similarity=0.335 Sum_probs=59.5
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCC-ccccccccCccccCCCcccccCcccC--CCCCEEEEcCC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAG-QSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCCLP 138 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G-~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~al~ 138 (406)
+|+||+|+| .|.+|+.+++.|..+|.++++++.++...- +.+...++ ...+.++ .+.+ .++|+|+.|+|
T Consensus 3 ~~~rvgiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g------~~~~~~~-~~~l~~~~~D~V~i~tp 74 (344)
T 3euw_A 3 LTLRIALFG-AGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANG------AEAVASP-DEVFARDDIDGIVIGSP 74 (344)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTT------CEEESSH-HHHTTCSCCCEEEECSC
T ss_pred CceEEEEEC-CcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcC------CceeCCH-HHHhcCCCCCEEEEeCC
Confidence 468999999 699999999999999999999998754321 11111111 1111111 1112 37899999999
Q ss_pred CcchHHHHhh-CCCCCEEE
Q 015441 139 HGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 139 ~~~s~~~~~~-l~~G~~VI 156 (406)
+..-.+++.. +++|+.|+
T Consensus 75 ~~~h~~~~~~al~~gk~v~ 93 (344)
T 3euw_A 75 TSTHVDLITRAVERGIPAL 93 (344)
T ss_dssp GGGHHHHHHHHHHTTCCEE
T ss_pred chhhHHHHHHHHHcCCcEE
Confidence 9888887765 57887665
No 59
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.47 E-value=5.6e-05 Score=73.65 Aligned_cols=86 Identities=23% Similarity=0.372 Sum_probs=59.1
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCC-ccccccccCccccCCCcccccCcccC--CCCCEEEEcCC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAG-QSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCCLP 138 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G-~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~al~ 138 (406)
||+||+|+| +|.+|+.+++.|.++|.++++++.++...- +.+...+ .++ +.+. ++.+ .++|+|+.|+|
T Consensus 2 m~~~vgiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~------~~~-~~~~-~~~l~~~~~D~V~i~tp 72 (331)
T 4hkt_A 2 MTVRFGLLG-AGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAY------GCE-VRTI-DAIEAAADIDAVVICTP 72 (331)
T ss_dssp -CEEEEEEC-CSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHT------TCE-ECCH-HHHHHCTTCCEEEECSC
T ss_pred CceEEEEEC-CCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHh------CCC-cCCH-HHHhcCCCCCEEEEeCC
Confidence 678999999 699999999999999999999998764321 1111111 111 1111 1112 37899999999
Q ss_pred CcchHHHHhh-CCCCCEEE
Q 015441 139 HGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 139 ~~~s~~~~~~-l~~G~~VI 156 (406)
+..-.+++.. +++|+.|+
T Consensus 73 ~~~h~~~~~~al~~gk~v~ 91 (331)
T 4hkt_A 73 TDTHADLIERFARAGKAIF 91 (331)
T ss_dssp GGGHHHHHHHHHHTTCEEE
T ss_pred chhHHHHHHHHHHcCCcEE
Confidence 9888887765 57888766
No 60
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.46 E-value=0.00011 Score=72.14 Aligned_cols=88 Identities=11% Similarity=0.218 Sum_probs=58.2
Q ss_pred CccEEEEECcccHHHHH-HHH-HHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccC--CCCCEEEEcC
Q 015441 62 KQVRIGLLGASGYTGAE-IVR-LLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCCL 137 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~e-Llr-lL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~al 137 (406)
||+||+|+| +|.+|+. .++ +|..+|.++++++.++..........++ + ...+.++ ++.+ .++|+|+.|+
T Consensus 1 m~~rvgiiG-~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~---~--~~~~~~~-~~ll~~~~~D~V~i~t 73 (345)
T 3f4l_A 1 MVINCAFIG-FGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYS---H--IHFTSDL-DEVLNDPDVKLVVVCT 73 (345)
T ss_dssp -CEEEEEEC-CSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGT---T--CEEESCT-HHHHTCTTEEEEEECS
T ss_pred CceEEEEEe-cCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcC---C--CceECCH-HHHhcCCCCCEEEEcC
Confidence 578999999 8999986 677 6678899999999986532111111111 1 1111111 1112 3589999999
Q ss_pred CCcchHHHHhh-CCCCCEEE
Q 015441 138 PHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 138 ~~~~s~~~~~~-l~~G~~VI 156 (406)
|+..-.+++.+ +++|+.|+
T Consensus 74 p~~~h~~~~~~al~aGk~Vl 93 (345)
T 3f4l_A 74 HADSHFEYAKRALEAGKNVL 93 (345)
T ss_dssp CGGGHHHHHHHHHHTTCEEE
T ss_pred ChHHHHHHHHHHHHcCCcEE
Confidence 99887787765 58898877
No 61
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.41 E-value=0.00013 Score=72.19 Aligned_cols=87 Identities=18% Similarity=0.394 Sum_probs=58.9
Q ss_pred CCccEEEEECcccHHHHH-HHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccC--CCCCEEEEcC
Q 015441 61 EKQVRIGLLGASGYTGAE-IVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCCL 137 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~e-LlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~al 137 (406)
.+++||||+| .|.+|+. .++.|..+|.++++++.++... +....++.. ..+.++ ++.+ .++|+|+.|+
T Consensus 5 ~~~~rvgiiG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~~--~~~~~~~~~-----~~~~~~-~~ll~~~~~D~V~i~t 75 (364)
T 3e82_A 5 NNTINIALIG-YGFVGKTFHAPLIRSVPGLNLAFVASRDEE--KVKRDLPDV-----TVIASP-EAAVQHPDVDLVVIAS 75 (364)
T ss_dssp --CEEEEEEC-CSHHHHHTHHHHHHTSTTEEEEEEECSCHH--HHHHHCTTS-----EEESCH-HHHHTCTTCSEEEECS
T ss_pred CCcceEEEEC-CCHHHHHHHHHHHhhCCCeEEEEEEcCCHH--HHHhhCCCC-----cEECCH-HHHhcCCCCCEEEEeC
Confidence 4568999999 6999997 7888999999999999876431 111111111 111111 1112 3789999999
Q ss_pred CCcchHHHHhh-CCCCCEEE
Q 015441 138 PHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 138 ~~~~s~~~~~~-l~~G~~VI 156 (406)
|+..-.+++.+ +++|+.|+
T Consensus 76 p~~~H~~~~~~al~aGk~Vl 95 (364)
T 3e82_A 76 PNATHAPLARLALNAGKHVV 95 (364)
T ss_dssp CGGGHHHHHHHHHHTTCEEE
T ss_pred ChHHHHHHHHHHHHCCCcEE
Confidence 99888887764 58898877
No 62
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.41 E-value=0.00019 Score=66.73 Aligned_cols=82 Identities=17% Similarity=0.267 Sum_probs=58.8
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccC-CCCCEEEEcCCCcch
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADF-SNVDAVFCCLPHGTT 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~-~~vDvVF~al~~~~s 142 (406)
+||+|+| .|.+|+.+++.|. .+.++++.+.++... .... ..++ .+.+ .++|+||.|+|+...
T Consensus 1 m~vgiIG-~G~mG~~~~~~l~-~~g~~lv~v~d~~~~---~~~~-----------~~~~-~~l~~~~~DvVv~~~~~~~~ 63 (236)
T 2dc1_A 1 MLVGLIG-YGAIGKFLAEWLE-RNGFEIAAILDVRGE---HEKM-----------VRGI-DEFLQREMDVAVEAASQQAV 63 (236)
T ss_dssp CEEEEEC-CSHHHHHHHHHHH-HTTCEEEEEECSSCC---CTTE-----------ESSH-HHHTTSCCSEEEECSCHHHH
T ss_pred CEEEEEC-CCHHHHHHHHHHh-cCCCEEEEEEecCcc---hhhh-----------cCCH-HHHhcCCCCEEEECCCHHHH
Confidence 4899999 5999999999888 578899888775421 1110 1111 1112 478999999998877
Q ss_pred HHHHhh-CCCCCEEEEcCCcc
Q 015441 143 QEIIKG-LPKSLKIVDLSADF 162 (406)
Q Consensus 143 ~~~~~~-l~~G~~VIDlSa~f 162 (406)
.+++.. +++|+.||+.+.-.
T Consensus 64 ~~~~~~~l~~G~~vv~~~~~~ 84 (236)
T 2dc1_A 64 KDYAEKILKAGIDLIVLSTGA 84 (236)
T ss_dssp HHHHHHHHHTTCEEEESCGGG
T ss_pred HHHHHHHHHCCCcEEEECccc
Confidence 777754 58899999887644
No 63
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.40 E-value=6.6e-05 Score=73.59 Aligned_cols=88 Identities=18% Similarity=0.228 Sum_probs=58.9
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCC-ccccccccCccccCCCcccccCcccC--CCCCEEEEcCC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAG-QSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCCLP 138 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G-~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~al~ 138 (406)
||+||+||| +|.+|+.+++.|..+|.++++++.++...- +.+...++ . . ..+.+. .+.+ .++|+|+.|+|
T Consensus 1 M~~rvgiIG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~---~-~-~~~~~~-~~ll~~~~~D~V~i~tp 73 (344)
T 3ezy_A 1 MSLRIGVIG-LGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLG---V-E-KAYKDP-HELIEDPNVDAVLVCSS 73 (344)
T ss_dssp -CEEEEEEC-CSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHT---C-S-EEESSH-HHHHHCTTCCEEEECSC
T ss_pred CeeEEEEEc-CCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhC---C-C-ceeCCH-HHHhcCCCCCEEEEcCC
Confidence 578999999 799999999999999999999998754311 11111110 0 0 011111 1112 37899999999
Q ss_pred CcchHHHHhh-CCCCCEEE
Q 015441 139 HGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 139 ~~~s~~~~~~-l~~G~~VI 156 (406)
+..-.+++.. +++|+.|+
T Consensus 74 ~~~h~~~~~~al~~gk~v~ 92 (344)
T 3ezy_A 74 TNTHSELVIACAKAKKHVF 92 (344)
T ss_dssp GGGHHHHHHHHHHTTCEEE
T ss_pred CcchHHHHHHHHhcCCeEE
Confidence 9887777764 57888665
No 64
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=97.39 E-value=0.00016 Score=68.14 Aligned_cols=94 Identities=13% Similarity=0.089 Sum_probs=54.3
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCc--cccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHL--ISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l--~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
|||.|.||||++|+.+++.|.+.+..+++.+..+......+.. +.+ ...|+.....+ ...+.++|+||.|.+...
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~--~~v~~~~~D~~d~~~l-~~~~~~~d~vi~~a~~~~ 77 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWR--GKVSVRQLDYFNQESM-VEAFKGMDTVVFIPSIIH 77 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGB--TTBEEEECCTTCHHHH-HHHTTTCSEEEECCCCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhh--CCCEEEEcCCCCHHHH-HHHHhCCCEEEEeCCCCc
Confidence 3799999999999999999987767788887643221111110 001 01122211111 123578999999987532
Q ss_pred --------hHHHHhhC-CCCC-EEEEcCC
Q 015441 142 --------TQEIIKGL-PKSL-KIVDLSA 160 (406)
Q Consensus 142 --------s~~~~~~l-~~G~-~VIDlSa 160 (406)
.+.+++++ ++|+ ++|-+|+
T Consensus 78 ~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 78 PSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 12334443 3564 5775665
No 65
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.39 E-value=0.00021 Score=67.49 Aligned_cols=72 Identities=19% Similarity=0.266 Sum_probs=54.8
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcchH
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQ 143 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s~ 143 (406)
+||+|+||+|.+|+.+++.+.+.|.++++++.++.. ++. .+ ...++|+|+.++.+....
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~---------------dl~---~~---~~~~~DvvIDfT~p~a~~ 59 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGD---------------PLS---LL---TDGNTEVVIDFTHPDVVM 59 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTC---------------CTH---HH---HHTTCCEEEECSCTTTHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCC---------------CHH---HH---hccCCcEEEEccChHHHH
Confidence 489999999999999999998889999999886420 111 11 003689999888888888
Q ss_pred HHHhh-CCCCCEEE
Q 015441 144 EIIKG-LPKSLKIV 156 (406)
Q Consensus 144 ~~~~~-l~~G~~VI 156 (406)
+.+.. +++|+.+|
T Consensus 60 ~~~~~a~~~g~~~V 73 (245)
T 1p9l_A 60 GNLEFLIDNGIHAV 73 (245)
T ss_dssp HHHHHHHHTTCEEE
T ss_pred HHHHHHHHcCCCEE
Confidence 87766 47888665
No 66
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.38 E-value=0.00017 Score=70.29 Aligned_cols=87 Identities=10% Similarity=0.217 Sum_probs=58.4
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCC-cccccCcccC--CCCCEEEEcC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLP-TMVAVKDADF--SNVDAVFCCL 137 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~-~~~~~~~~~~--~~vDvVF~al 137 (406)
+++||+|+| +|.+|+.+++.|..+|.++++++.+++.. .+.+...++ .+ .+.+. ++.+ .++|+|+.|+
T Consensus 4 ~~~rigiiG-~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~------~~~~~~~~-~~ll~~~~~D~V~i~t 75 (329)
T 3evn_A 4 SKVRYGVVS-TAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYH------LPKAYDKL-EDMLADESIDVIYVAT 75 (329)
T ss_dssp -CEEEEEEB-CCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCC------CSCEESCH-HHHHTCTTCCEEEECS
T ss_pred CceEEEEEe-chHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcC------CCcccCCH-HHHhcCCCCCEEEECC
Confidence 458999999 69999999999988899999999875432 222222111 11 11111 1112 3789999999
Q ss_pred CCcchHHHHhh-CCCCCEEE
Q 015441 138 PHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 138 ~~~~s~~~~~~-l~~G~~VI 156 (406)
|+..-.+++.. +++|+.|+
T Consensus 76 p~~~h~~~~~~al~aGk~Vl 95 (329)
T 3evn_A 76 INQDHYKVAKAALLAGKHVL 95 (329)
T ss_dssp CGGGHHHHHHHHHHTTCEEE
T ss_pred CcHHHHHHHHHHHHCCCeEE
Confidence 99887787764 58888766
No 67
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.36 E-value=0.00024 Score=69.87 Aligned_cols=87 Identities=18% Similarity=0.413 Sum_probs=59.4
Q ss_pred CCccEEEEECcccHHHHH-HHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccC--CCCCEEEEcC
Q 015441 61 EKQVRIGLLGASGYTGAE-IVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCCL 137 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~e-LlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~al 137 (406)
.+++||||+| +|.+|+. .++.|..+|.++++++.++... +....++ + ...+.++ ++.+ .++|+|+.|+
T Consensus 5 ~~~~rvgiiG-~G~~g~~~~~~~~~~~~~~~l~av~d~~~~--~~~~~~~---~--~~~~~~~-~~ll~~~~vD~V~i~t 75 (352)
T 3kux_A 5 ADKIKVGLLG-YGYASKTFHAPLIMGTPGLELAGVSSSDAS--KVHADWP---A--IPVVSDP-QMLFNDPSIDLIVIPT 75 (352)
T ss_dssp TCCEEEEEEC-CSHHHHHTHHHHHHTSTTEEEEEEECSCHH--HHHTTCS---S--CCEESCH-HHHHHCSSCCEEEECS
T ss_pred cCCceEEEEC-CCHHHHHHHHHHHhhCCCcEEEEEECCCHH--HHHhhCC---C--CceECCH-HHHhcCCCCCEEEEeC
Confidence 3568999999 8999997 8899999999999999975432 1111111 1 1111111 1111 3699999999
Q ss_pred CCcchHHHHhh-CCCCCEEE
Q 015441 138 PHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 138 ~~~~s~~~~~~-l~~G~~VI 156 (406)
|+..-.+++.+ +++|+.|+
T Consensus 76 p~~~H~~~~~~al~aGkhV~ 95 (352)
T 3kux_A 76 PNDTHFPLAQSALAAGKHVV 95 (352)
T ss_dssp CTTTHHHHHHHHHHTTCEEE
T ss_pred ChHHHHHHHHHHHHCCCcEE
Confidence 99888787764 68898776
No 68
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.35 E-value=0.00011 Score=70.84 Aligned_cols=86 Identities=19% Similarity=0.288 Sum_probs=59.0
Q ss_pred ccEEEEECcccHHHHH-HHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc
Q 015441 63 QVRIGLLGASGYTGAE-IVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG 140 (406)
Q Consensus 63 ~ikVaIvGATG~vG~e-LlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~ 140 (406)
++||+||| .|.+|+. +++.|.++|.++++++.++... .+.+...+ + .+.+.+. ++.+.++|+|+.|+|+.
T Consensus 6 ~~~igiIG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~----~--~~~~~~~-~~ll~~~D~V~i~tp~~ 77 (308)
T 3uuw_A 6 NIKMGMIG-LGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDY----R--IMPFDSI-ESLAKKCDCIFLHSSTE 77 (308)
T ss_dssp CCEEEEEC-CSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHH----T--CCBCSCH-HHHHTTCSEEEECCCGG
T ss_pred cCcEEEEe-cCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHc----C--CCCcCCH-HHHHhcCCEEEEeCCcH
Confidence 47999999 7999996 9999999999999999876432 11111111 1 1111111 11234899999999999
Q ss_pred chHHHHhh-CCCCCEEE
Q 015441 141 TTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 141 ~s~~~~~~-l~~G~~VI 156 (406)
.-.+++.. +++|+.|+
T Consensus 78 ~h~~~~~~al~~gk~vl 94 (308)
T 3uuw_A 78 THYEIIKILLNLGVHVY 94 (308)
T ss_dssp GHHHHHHHHHHTTCEEE
T ss_pred hHHHHHHHHHHCCCcEE
Confidence 88887765 58888776
No 69
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.35 E-value=0.00023 Score=70.27 Aligned_cols=86 Identities=16% Similarity=0.265 Sum_probs=59.2
Q ss_pred CccEEEEECcccHHHHH-HHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccC--CCCCEEEEcCC
Q 015441 62 KQVRIGLLGASGYTGAE-IVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCCLP 138 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~e-LlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~al~ 138 (406)
+++|||||| +|.+|+. .++.|..+|.++++++.++... ++...++. ...+.++ ++.+ .++|+|+.|+|
T Consensus 4 ~~~rvgiiG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~~--~~~~~~~~-----~~~~~~~-~~ll~~~~vD~V~i~tp 74 (362)
T 3fhl_A 4 EIIKTGLAA-FGMSGQVFHAPFISTNPHFELYKIVERSKE--LSKERYPQ-----ASIVRSF-KELTEDPEIDLIVVNTP 74 (362)
T ss_dssp CCEEEEESC-CSHHHHHTTHHHHHHCTTEEEEEEECSSCC--GGGTTCTT-----SEEESCS-HHHHTCTTCCEEEECSC
T ss_pred CceEEEEEC-CCHHHHHHHHHHHhhCCCeEEEEEEcCCHH--HHHHhCCC-----CceECCH-HHHhcCCCCCEEEEeCC
Confidence 468999999 7999997 7888888999999999976532 12222211 1111111 1112 35999999999
Q ss_pred CcchHHHHhh-CCCCCEEE
Q 015441 139 HGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 139 ~~~s~~~~~~-l~~G~~VI 156 (406)
+..-.+++.+ +++|+.|+
T Consensus 75 ~~~H~~~~~~al~aGkhVl 93 (362)
T 3fhl_A 75 DNTHYEYAGMALEAGKNVV 93 (362)
T ss_dssp GGGHHHHHHHHHHTTCEEE
T ss_pred hHHHHHHHHHHHHCCCeEE
Confidence 9877777764 58898776
No 70
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.35 E-value=0.00016 Score=71.05 Aligned_cols=88 Identities=13% Similarity=0.195 Sum_probs=59.8
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccC--CCCCEEEEcC
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCCL 137 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~al 137 (406)
.|++||+|+| .|.+|+..++.|..+|.++++++.++... .+.+...+ + ++.+.+. ++.+ .++|+|+.|+
T Consensus 3 ~~~~~vgiiG-~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~----g--~~~~~~~-~~~l~~~~~D~V~i~t 74 (354)
T 3db2_A 3 YNPVGVAAIG-LGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRY----N--CAGDATM-EALLAREDVEMVIITV 74 (354)
T ss_dssp CCCEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHH----T--CCCCSSH-HHHHHCSSCCEEEECS
T ss_pred CCcceEEEEc-cCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHc----C--CCCcCCH-HHHhcCCCCCEEEEeC
Confidence 3568999999 79999999999999999999999875431 11111111 1 1111111 1112 4689999999
Q ss_pred CCcchHHHHhh-CCCCCEEE
Q 015441 138 PHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 138 ~~~~s~~~~~~-l~~G~~VI 156 (406)
|+..-.+++.+ +++|+.|+
T Consensus 75 p~~~h~~~~~~al~~gk~vl 94 (354)
T 3db2_A 75 PNDKHAEVIEQCARSGKHIY 94 (354)
T ss_dssp CTTSHHHHHHHHHHTTCEEE
T ss_pred ChHHHHHHHHHHHHcCCEEE
Confidence 99888787764 58888665
No 71
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.34 E-value=0.00016 Score=65.67 Aligned_cols=99 Identities=16% Similarity=0.164 Sum_probs=53.3
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc-CCccccccccCcc--ccCCCcccccCcccCCCCCEEEEcCC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK-AGQSIGSVFPHLI--SQDLPTMVAVKDADFSNVDAVFCCLP 138 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~-~G~~i~~v~p~l~--~~~~~~~~~~~~~~~~~vDvVF~al~ 138 (406)
||.+|.|.||||.+|+.+++.|++....+++.+..+.. .-+.+....+... ..|+.....+ ...+.++|+||.+++
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~-~~~~~~~d~vv~~ag 82 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXL-EQAVTNAEVVFVGAM 82 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHH-HHHHTTCSEEEESCC
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHH-HHHHcCCCEEEEcCC
Confidence 33459999999999999999998334567777653222 1111100011110 1122111111 112468999999997
Q ss_pred Ccc--hHHHHhhC-CCC-CEEEEcCCc
Q 015441 139 HGT--TQEIIKGL-PKS-LKIVDLSAD 161 (406)
Q Consensus 139 ~~~--s~~~~~~l-~~G-~~VIDlSa~ 161 (406)
... ++.+++.+ +.| .++|-.|+.
T Consensus 83 ~~n~~~~~~~~~~~~~~~~~iv~iSs~ 109 (221)
T 3r6d_A 83 ESGSDMASIVKALSRXNIRRVIGVSMA 109 (221)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred CCChhHHHHHHHHHhcCCCeEEEEeec
Confidence 521 34445544 344 367766664
No 72
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.31 E-value=0.00018 Score=70.50 Aligned_cols=89 Identities=18% Similarity=0.210 Sum_probs=59.9
Q ss_pred CccEEEEECcccHHHHHHHHHHH-cCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccC--CCCCEEEEcC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLA-NHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCCL 137 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~-~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~al 137 (406)
||+||+||| .|.+|+..++.|. .+|.++++++.++... .+.+...++. ....+.+. ++.+ .++|+|+.|+
T Consensus 1 M~~rigiIG-~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~----~~~~~~~~-~~ll~~~~~D~V~i~t 74 (344)
T 3mz0_A 1 MSLRIGVIG-TGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQL----NATVYPND-DSLLADENVDAVLVTS 74 (344)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTC----CCEEESSH-HHHHHCTTCCEEEECS
T ss_pred CeEEEEEEC-ccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCC----CCeeeCCH-HHHhcCCCCCEEEECC
Confidence 578999999 6999999999998 7899999999876431 1112211110 01111111 1111 3689999999
Q ss_pred CCcchHHHHhh-CCCCCEEE
Q 015441 138 PHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 138 ~~~~s~~~~~~-l~~G~~VI 156 (406)
|+..-.+++.+ +++|+.|+
T Consensus 75 p~~~h~~~~~~al~~Gk~vl 94 (344)
T 3mz0_A 75 WGPAHESSVLKAIKAQKYVF 94 (344)
T ss_dssp CGGGHHHHHHHHHHTTCEEE
T ss_pred CchhHHHHHHHHHHCCCcEE
Confidence 99888887765 58888776
No 73
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=97.31 E-value=0.0006 Score=61.69 Aligned_cols=95 Identities=15% Similarity=0.234 Sum_probs=54.8
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCc-ccccCcccCCCCCEEEEcCCCcc-
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPT-MVAVKDADFSNVDAVFCCLPHGT- 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~-~~~~~~~~~~~vDvVF~al~~~~- 141 (406)
|||.|.||||++|+.+++.|.+.. .+++.+..+...-.....+. +...|+.. .+.+ ...+.++|+||.|++...
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~--~~~~D~~d~~~~~-~~~~~~~d~vi~~ag~~~~ 76 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTD-YQIYAGARKVEQVPQYNNVK--AVHFDVDWTPEEM-AKQLHGMDAIINVSGSGGK 76 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSS-CEEEEEESSGGGSCCCTTEE--EEECCTTSCHHHH-HTTTTTCSEEEECCCCTTS
T ss_pred CeEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCccchhhcCCce--EEEecccCCHHHH-HHHHcCCCEEEECCcCCCC
Confidence 389999999999999999998764 67777753222111111000 00112222 1111 223568999999998543
Q ss_pred ---------hHHHHhhC-CCC-CEEEEcCCcc
Q 015441 142 ---------TQEIIKGL-PKS-LKIVDLSADF 162 (406)
Q Consensus 142 ---------s~~~~~~l-~~G-~~VIDlSa~f 162 (406)
+..+++++ +.| .++|-+|+.+
T Consensus 77 ~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~ 108 (219)
T 3dqp_A 77 SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF 108 (219)
T ss_dssp SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence 23344443 345 3677677754
No 74
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.30 E-value=0.00024 Score=70.18 Aligned_cols=86 Identities=19% Similarity=0.331 Sum_probs=59.5
Q ss_pred CccEEEEECcccHHHHH-HHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccC--CCCCEEEEcCC
Q 015441 62 KQVRIGLLGASGYTGAE-IVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCCLP 138 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~e-LlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~al~ 138 (406)
+++||||+| .|.+|+. .++.|..+|.++++++.++... +....++.. ..+.++ ++.+ .++|+|+.|+|
T Consensus 4 ~~~rvgiiG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~~--~~~~~~~~~-----~~~~~~-~~ll~~~~vD~V~i~tp 74 (358)
T 3gdo_A 4 DTIKVGILG-YGLSGSVFHGPLLDVLDEYQISKIMTSRTE--EVKRDFPDA-----EVVHEL-EEITNDPAIELVIVTTP 74 (358)
T ss_dssp TCEEEEEEC-CSHHHHHTTHHHHTTCTTEEEEEEECSCHH--HHHHHCTTS-----EEESST-HHHHTCTTCCEEEECSC
T ss_pred CcceEEEEc-cCHHHHHHHHHHHhhCCCeEEEEEEcCCHH--HHHhhCCCC-----ceECCH-HHHhcCCCCCEEEEcCC
Confidence 458999999 7999997 7888888999999999976531 122212111 111111 1112 37899999999
Q ss_pred CcchHHHHhh-CCCCCEEE
Q 015441 139 HGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 139 ~~~s~~~~~~-l~~G~~VI 156 (406)
+..-.+++.+ +++|+.|+
T Consensus 75 ~~~H~~~~~~al~aGkhVl 93 (358)
T 3gdo_A 75 SGLHYEHTMACIQAGKHVV 93 (358)
T ss_dssp TTTHHHHHHHHHHTTCEEE
T ss_pred cHHHHHHHHHHHHcCCeEE
Confidence 9888887765 58898776
No 75
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.29 E-value=0.00015 Score=70.95 Aligned_cols=91 Identities=14% Similarity=0.266 Sum_probs=59.0
Q ss_pred cccCCccEEEEECcccHHHHH-HHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCC-cccccCcccC--CCCCE
Q 015441 58 QKSEKQVRIGLLGASGYTGAE-IVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLP-TMVAVKDADF--SNVDA 132 (406)
Q Consensus 58 ~~~~~~ikVaIvGATG~vG~e-LlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~-~~~~~~~~~~--~~vDv 132 (406)
....+|+|||||| +|.+|+. +++.|..+|.+++++++++... .+.+..-++ ++ .+.++ ++.+ .++|+
T Consensus 18 ~~~~~mirigiIG-~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g------~~~~y~d~-~ell~~~~iDa 89 (350)
T 4had_A 18 LYFQSMLRFGIIS-TAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFS------VPHAFGSY-EEMLASDVIDA 89 (350)
T ss_dssp ----CCEEEEEES-CCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHT------CSEEESSH-HHHHHCSSCSE
T ss_pred ccccCccEEEEEc-ChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcC------CCeeeCCH-HHHhcCCCCCE
Confidence 3345679999999 8999985 6888999999999999986431 112211111 00 01111 1111 46899
Q ss_pred EEEcCCCcchHHHHhh-CCCCCEEE
Q 015441 133 VFCCLPHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 133 VF~al~~~~s~~~~~~-l~~G~~VI 156 (406)
|+.|+|+..=.+++.+ +++|+.|+
T Consensus 90 V~I~tP~~~H~~~~~~al~aGkhVl 114 (350)
T 4had_A 90 VYIPLPTSQHIEWSIKAADAGKHVV 114 (350)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCEEE
T ss_pred EEEeCCCchhHHHHHHHHhcCCEEE
Confidence 9999999877777754 68898876
No 76
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.27 E-value=0.00034 Score=67.97 Aligned_cols=92 Identities=15% Similarity=0.097 Sum_probs=60.0
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCc--c----cCCCCCEEEE
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKD--A----DFSNVDAVFC 135 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~--~----~~~~vDvVF~ 135 (406)
+|+||||||+.|++|+..++.|... ..+++++.++...-......++... -...++++-. + .-.++|+|+.
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~~~~~~~~~~~~--~~~~~~~ll~~~~~l~~~~~~vD~V~I 78 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPRHLKAIKEV-GGVLVASLDPATNVGLVDSFFPEAE--FFTEPEAFEAYLEDLRDRGEGVDYLSI 78 (312)
T ss_dssp -CCEEEEECTTSSSHHHHHHHHHHT-TCEEEEEECSSCCCGGGGGTCTTCE--EESCHHHHHHHHHHHHHTTCCCSEEEE
T ss_pred CceEEEEECCChHHHHHHHHHHHhC-CCEEEEEEcCCHHHHHHHhhCCCCc--eeCCHHHHHHHhhhhcccCCCCcEEEE
Confidence 4689999997799999999999876 5799999986543222222222111 0011111100 0 1147899999
Q ss_pred cCCCcchHHHHhh-CCCCCEEE
Q 015441 136 CLPHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 136 al~~~~s~~~~~~-l~~G~~VI 156 (406)
|+|+..=.+++.+ +++|+.|+
T Consensus 79 ~tP~~~H~~~~~~al~aGkhVl 100 (312)
T 3o9z_A 79 ASPNHLHYPQIRMALRLGANAL 100 (312)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEE
T ss_pred CCCchhhHHHHHHHHHCCCeEE
Confidence 9999877777765 68898877
No 77
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.26 E-value=0.00019 Score=70.97 Aligned_cols=86 Identities=17% Similarity=0.223 Sum_probs=58.7
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccC--CCCCEEEEcCCCc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCCLPHG 140 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~al~~~ 140 (406)
++||+|+| .|.+|+..++.|..+|.++++++.++...-..... .+ .+..+.+. ++.+ .++|+|+.|+|+.
T Consensus 5 ~~~vgiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~---~~---g~~~~~~~-~~ll~~~~~D~V~i~tp~~ 76 (359)
T 3e18_A 5 KYQLVIVG-YGGMGSYHVTLASAADNLEVHGVFDILAEKREAAA---QK---GLKIYESY-EAVLADEKVDAVLIATPND 76 (359)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHH---TT---TCCBCSCH-HHHHHCTTCCEEEECSCGG
T ss_pred cCcEEEEC-cCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHH---hc---CCceeCCH-HHHhcCCCCCEEEEcCCcH
Confidence 58999999 89999999999999999999999875432111100 01 11111111 1111 3789999999998
Q ss_pred chHHHHhh-CCCCCEEE
Q 015441 141 TTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 141 ~s~~~~~~-l~~G~~VI 156 (406)
.-.+++.+ +++|+.|+
T Consensus 77 ~h~~~~~~al~aGkhVl 93 (359)
T 3e18_A 77 SHKELAISALEAGKHVV 93 (359)
T ss_dssp GHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHCCCCEE
Confidence 87787765 58898766
No 78
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.26 E-value=0.00032 Score=67.52 Aligned_cols=86 Identities=13% Similarity=0.271 Sum_probs=59.0
Q ss_pred cCCccEEEEECcccHHHHHHHHHHHc---CCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEc
Q 015441 60 SEKQVRIGLLGASGYTGAEIVRLLAN---HPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCC 136 (406)
Q Consensus 60 ~~~~ikVaIvGATG~vG~eLlrlL~~---hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~a 136 (406)
+.+++||+|+| .|.+|+..++.|.. ++.++++++.+++...+... . ....++++ . .-.++|+|+.|
T Consensus 4 ~~~~~rvgiIG-~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~a~~~g-----~---~~~~~~el-l-~~~~vD~V~i~ 72 (294)
T 1lc0_A 4 NSGKFGVVVVG-VGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELGSLDE-----V---RQISLEDA-L-RSQEIDVAYIC 72 (294)
T ss_dssp CCCSEEEEEEC-CSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCCEETT-----E---EBCCHHHH-H-HCSSEEEEEEC
T ss_pred CCCcceEEEEE-EcHHHHHHHHHHhccccCCCEEEEEEECchHHHHHcC-----C---CCCCHHHH-h-cCCCCCEEEEe
Confidence 34578999999 79999999998876 68899999998654322111 0 00111111 0 01368999999
Q ss_pred CCCcchHHHHhh-CCCCCEEE
Q 015441 137 LPHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 137 l~~~~s~~~~~~-l~~G~~VI 156 (406)
+|+..-.+++.+ +++|+.|+
T Consensus 73 tp~~~H~~~~~~al~aGkhVl 93 (294)
T 1lc0_A 73 SESSSHEDYIRQFLQAGKHVL 93 (294)
T ss_dssp SCGGGHHHHHHHHHHTTCEEE
T ss_pred CCcHhHHHHHHHHHHCCCcEE
Confidence 998877777764 58898766
No 79
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=97.26 E-value=0.00035 Score=66.58 Aligned_cols=93 Identities=17% Similarity=0.281 Sum_probs=58.9
Q ss_pred ccCCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccCCCCCEEEEcC
Q 015441 59 KSEKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCL 137 (406)
Q Consensus 59 ~~~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al 137 (406)
++.||+||+|+|+||.+|+.+.+.|.... .+++. .+++.. -+.+.. . + +. .... .+.+.++|+||+|+
T Consensus 7 ~~~mmm~I~iIG~tG~mG~~la~~l~~~g-~~V~~-~~r~~~~~~~~~~-~----g--~~-~~~~-~~~~~~aDvVi~av 75 (286)
T 3c24_A 7 NDVGPKTVAILGAGGKMGARITRKIHDSA-HHLAA-IEIAPEGRDRLQG-M----G--IP-LTDG-DGWIDEADVVVLAL 75 (286)
T ss_dssp CSCCCCEEEEETTTSHHHHHHHHHHHHSS-SEEEE-ECCSHHHHHHHHH-T----T--CC-CCCS-SGGGGTCSEEEECS
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHhCC-CEEEE-EECCHHHHHHHHh-c----C--CC-cCCH-HHHhcCCCEEEEcC
Confidence 33456799999988999999999998654 46654 343211 011111 0 1 11 1111 22346899999999
Q ss_pred CCcchHHHHhh----CCCCCEEEEcCCcc
Q 015441 138 PHGTTQEIIKG----LPKSLKIVDLSADF 162 (406)
Q Consensus 138 ~~~~s~~~~~~----l~~G~~VIDlSa~f 162 (406)
+.....+.++. +..+..|||.|...
T Consensus 76 ~~~~~~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 76 PDNIIEKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp CHHHHHHHHHHHGGGSCTTCEEEESCSHH
T ss_pred CchHHHHHHHHHHHhCCCCCEEEECCCCc
Confidence 98776665543 34688999988865
No 80
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.24 E-value=0.00016 Score=71.23 Aligned_cols=87 Identities=20% Similarity=0.290 Sum_probs=59.0
Q ss_pred CccEEEEECcccHHHH-HHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccC--CCCCEEEEcC
Q 015441 62 KQVRIGLLGASGYTGA-EIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCCL 137 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~-eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~al 137 (406)
+++||+||| +|.+|+ .+++.|..+|.++++++.++... .+.+...+ .++.+.++ ++.+ .++|+|+.|+
T Consensus 26 ~~~rigiIG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~------g~~~~~~~-~~ll~~~~~D~V~i~t 97 (350)
T 3rc1_A 26 NPIRVGVIG-CADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERF------GGEPVEGY-PALLERDDVDAVYVPL 97 (350)
T ss_dssp CCEEEEEES-CCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHH------CSEEEESH-HHHHTCTTCSEEEECC
T ss_pred CceEEEEEc-CcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHc------CCCCcCCH-HHHhcCCCCCEEEECC
Confidence 358999999 899998 79999999999999999875421 11111111 11111111 1112 3689999999
Q ss_pred CCcchHHHHhh-CCCCCEEE
Q 015441 138 PHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 138 ~~~~s~~~~~~-l~~G~~VI 156 (406)
|+..-.+++.+ +++|+.|+
T Consensus 98 p~~~h~~~~~~al~aGk~Vl 117 (350)
T 3rc1_A 98 PAVLHAEWIDRALRAGKHVL 117 (350)
T ss_dssp CGGGHHHHHHHHHHTTCEEE
T ss_pred CcHHHHHHHHHHHHCCCcEE
Confidence 99988887765 58888766
No 81
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=97.24 E-value=0.00039 Score=62.77 Aligned_cols=90 Identities=20% Similarity=0.267 Sum_probs=52.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccc-cCcc--ccCCCcccccCcccCCCCCEEEEcCCCc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVF-PHLI--SQDLPTMVAVKDADFSNVDAVFCCLPHG 140 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~-p~l~--~~~~~~~~~~~~~~~~~vDvVF~al~~~ 140 (406)
|||.|.||||++|+.|++.|++.. .+++.+..+... ..... +.+. ..|+. +.+...+.++|+||.|++..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~---~~~~~~~~~~~~~~D~~---d~~~~~~~~~d~vi~~ag~~ 73 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRG-HEVLAVVRDPQK---AADRLGATVATLVKEPL---VLTEADLDSVDAVVDALSVP 73 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHH---HHHHTCTTSEEEECCGG---GCCHHHHTTCSEEEECCCCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCC-CEEEEEEecccc---cccccCCCceEEecccc---cccHhhcccCCEEEECCccC
Confidence 479999999999999999998764 577777532111 11000 0010 11221 11113457899999999763
Q ss_pred -----------chHHHHhhC-CCCCEEEEcCC
Q 015441 141 -----------TTQEIIKGL-PKSLKIVDLSA 160 (406)
Q Consensus 141 -----------~s~~~~~~l-~~G~~VIDlSa 160 (406)
.+..+++++ ++|.++|=+|+
T Consensus 74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS 105 (224)
T 3h2s_A 74 WGSGRGYLHLDFATHLVSLLRNSDTLAVFILG 105 (224)
T ss_dssp TTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred CCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 113344544 44666776665
No 82
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.22 E-value=0.00036 Score=67.93 Aligned_cols=92 Identities=17% Similarity=0.180 Sum_probs=59.8
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCc--c-----cCCCCCEEE
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKD--A-----DFSNVDAVF 134 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~--~-----~~~~vDvVF 134 (406)
+|+||||||+.|++|+..++.|... ..+++++.++...-......++... ....++++-. + .-.++|+|+
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~~~~~~~~~~~~--~~~~~~~ll~~~~~l~~~~~~~vD~V~ 78 (318)
T 3oa2_A 2 HMKNFALIGAAGYIAPRHMRAIKDT-GNCLVSAYDINDSVGIIDSISPQSE--FFTEFEFFLDHASNLKRDSATALDYVS 78 (318)
T ss_dssp -CCEEEEETTTSSSHHHHHHHHHHT-TCEEEEEECSSCCCGGGGGTCTTCE--EESSHHHHHHHHHHHTTSTTTSCCEEE
T ss_pred CceEEEEECCCcHHHHHHHHHHHhC-CCEEEEEEcCCHHHHHHHhhCCCCc--EECCHHHHHHhhhhhhhccCCCCcEEE
Confidence 4689999997799999999999876 6899999986543222222222111 0011111100 0 014789999
Q ss_pred EcCCCcchHHHHhh-CCCCCEEE
Q 015441 135 CCLPHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 135 ~al~~~~s~~~~~~-l~~G~~VI 156 (406)
.|+|+..=.+++.+ +++|+.|+
T Consensus 79 I~tP~~~H~~~~~~al~aGkhVl 101 (318)
T 3oa2_A 79 ICSPNYLHYPHIAAGLRLGCDVI 101 (318)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEE
T ss_pred ECCCcHHHHHHHHHHHHCCCeEE
Confidence 99999877777764 68898876
No 83
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.21 E-value=0.00039 Score=68.05 Aligned_cols=83 Identities=16% Similarity=0.234 Sum_probs=57.6
Q ss_pred ccEEEEECcccHHHH-HHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 63 QVRIGLLGASGYTGA-EIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 63 ~ikVaIvGATG~vG~-eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
++||+|+| +|.+|+ ..++.|..+|.+++++++++...-..+. .+ ..++++ -++..++|+|+.|+|+..
T Consensus 25 ~~rvgiiG-~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~~g~~----~~-----~~~~~l-l~~~~~vD~V~i~tp~~~ 93 (330)
T 4ew6_A 25 PINLAIVG-VGKIVRDQHLPSIAKNANFKLVATASRHGTVEGVN----SY-----TTIEAM-LDAEPSIDAVSLCMPPQY 93 (330)
T ss_dssp CEEEEEEC-CSHHHHHTHHHHHHHCTTEEEEEEECSSCCCTTSE----EE-----SSHHHH-HHHCTTCCEEEECSCHHH
T ss_pred CceEEEEe-cCHHHHHHHHHHHHhCCCeEEEEEEeCChhhcCCC----cc-----CCHHHH-HhCCCCCCEEEEeCCcHH
Confidence 48999999 799998 7999999999999999998653211010 00 011111 001136899999999887
Q ss_pred hHHHHhh-CCCCCEEE
Q 015441 142 TQEIIKG-LPKSLKIV 156 (406)
Q Consensus 142 s~~~~~~-l~~G~~VI 156 (406)
-.+++.+ +++|+.|+
T Consensus 94 H~~~~~~al~aGkhVl 109 (330)
T 4ew6_A 94 RYEAAYKALVAGKHVF 109 (330)
T ss_dssp HHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHcCCcEE
Confidence 7777764 58898877
No 84
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.16 E-value=0.00035 Score=68.95 Aligned_cols=89 Identities=12% Similarity=0.167 Sum_probs=59.5
Q ss_pred CccEEEEECcccHHHHHHHHHHH-cCCCceEEEEeccCcCC-ccccccccCccccCCCcccccCcccC--CCCCEEEEcC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLA-NHPYFGIKLMTADRKAG-QSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCCL 137 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~-~hp~~elv~l~s~~~~G-~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~al 137 (406)
|++||+||| +|.+|+..++.|. .+|.++++++.++...- +.+...++ .....+.++ ++.+ .++|+|+.|+
T Consensus 22 ~~~rvgiIG-~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g----~~~~~~~~~-~~ll~~~~~D~V~i~t 95 (357)
T 3ec7_A 22 MTLKAGIVG-IGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYA----IEAKDYNDY-HDLINDKDVEVVIITA 95 (357)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHT----CCCEEESSH-HHHHHCTTCCEEEECS
T ss_pred CeeeEEEEC-CcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhC----CCCeeeCCH-HHHhcCCCCCEEEEcC
Confidence 357999999 7999999999998 78999999998764321 11111111 001111111 1111 3689999999
Q ss_pred CCcchHHHHhh-CCCCCEEE
Q 015441 138 PHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 138 ~~~~s~~~~~~-l~~G~~VI 156 (406)
|+..-.+++.+ +++|+.|+
T Consensus 96 p~~~h~~~~~~al~aGk~Vl 115 (357)
T 3ec7_A 96 SNEAHADVAVAALNANKYVF 115 (357)
T ss_dssp CGGGHHHHHHHHHHTTCEEE
T ss_pred CcHHHHHHHHHHHHCCCCEE
Confidence 99888887765 58888766
No 85
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.16 E-value=0.00022 Score=69.49 Aligned_cols=88 Identities=10% Similarity=0.129 Sum_probs=59.1
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccC--CCCCEEEEcCC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCCLP 138 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~al~ 138 (406)
+++||+|+| +|.+|+.+++.|..+|.++++++.++... .+.+...++ . . ..+.+. ++.+ .++|+|+.|+|
T Consensus 4 ~~~~igiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~---~-~-~~~~~~-~~ll~~~~~D~V~i~tp 76 (330)
T 3e9m_A 4 DKIRYGIMS-TAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELA---I-P-VAYGSY-EELCKDETIDIIYIPTY 76 (330)
T ss_dssp CCEEEEECS-CCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTT---C-C-CCBSSH-HHHHHCTTCSEEEECCC
T ss_pred CeEEEEEEC-chHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcC---C-C-ceeCCH-HHHhcCCCCCEEEEcCC
Confidence 458999999 69999999999999999999999875431 111111111 0 0 011111 1111 37899999999
Q ss_pred CcchHHHHhh-CCCCCEEE
Q 015441 139 HGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 139 ~~~s~~~~~~-l~~G~~VI 156 (406)
+..-.+++.. +++|+.|+
T Consensus 77 ~~~h~~~~~~al~~gk~vl 95 (330)
T 3e9m_A 77 NQGHYSAAKLALSQGKPVL 95 (330)
T ss_dssp GGGHHHHHHHHHHTTCCEE
T ss_pred CHHHHHHHHHHHHCCCeEE
Confidence 9988887765 57887665
No 86
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=97.13 E-value=0.0003 Score=70.35 Aligned_cols=88 Identities=11% Similarity=0.269 Sum_probs=55.6
Q ss_pred cCCccEEEEECcccHHHHHHHHHHHcCC-CceEEEEeccCcC-CccccccccCccccCCCcccccCcccCCCCCEEEEcC
Q 015441 60 SEKQVRIGLLGASGYTGAEIVRLLANHP-YFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCL 137 (406)
Q Consensus 60 ~~~~ikVaIvGATG~vG~eLlrlL~~hp-~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al 137 (406)
+..++||+|+| +|+ |+.-++.+.+.| .+|++++.++... .+.+..-+ .++.+.+. ++.++++|+|+.|+
T Consensus 4 ~~~~~rv~VvG-~G~-g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~------gv~~~~~~-~~l~~~~D~v~i~~ 74 (372)
T 4gmf_A 4 ASPKQRVLIVG-AKF-GEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAF------GIPLYTSP-EQITGMPDIACIVV 74 (372)
T ss_dssp ---CEEEEEEC-STT-THHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHT------TCCEESSG-GGCCSCCSEEEECC
T ss_pred CCCCCEEEEEe-hHH-HHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHh------CCCEECCH-HHHhcCCCEEEEEC
Confidence 34568999999 786 999899888776 5999999986532 12222211 11222222 22346799999999
Q ss_pred CCcch----HHHHhh-CCCCCEEE
Q 015441 138 PHGTT----QEIIKG-LPKSLKIV 156 (406)
Q Consensus 138 ~~~~s----~~~~~~-l~~G~~VI 156 (406)
|+..- .+++.+ +++|+.|+
T Consensus 75 p~~~h~~~~~~~a~~al~aGkhVl 98 (372)
T 4gmf_A 75 RSTVAGGAGTQLARHFLARGVHVI 98 (372)
T ss_dssp C--CTTSHHHHHHHHHHHTTCEEE
T ss_pred CCcccchhHHHHHHHHHHcCCcEE
Confidence 97653 566654 58899876
No 87
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.12 E-value=0.00032 Score=68.39 Aligned_cols=88 Identities=11% Similarity=0.184 Sum_probs=57.8
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCC--CceEEEEeccCcC-CccccccccCccccCCCcccccCcccC--CCCCEEEEc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHP--YFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCC 136 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp--~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~a 136 (406)
||+||||+| +|.+|+..++.|..+| .++++++.++... .+.+...++ . . ..+.+. ++.+ .++|+|+.|
T Consensus 1 M~~rigiiG-~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~---~-~-~~~~~~-~~ll~~~~vD~V~i~ 73 (334)
T 3ohs_X 1 MALRWGIVS-VGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHD---I-P-KAYGSY-EELAKDPNVEVAYVG 73 (334)
T ss_dssp -CEEEEEEC-CSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHT---C-S-CEESSH-HHHHHCTTCCEEEEC
T ss_pred CccEEEEEC-chHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcC---C-C-cccCCH-HHHhcCCCCCEEEEC
Confidence 578999999 8999999999998877 4789999876421 111111110 0 0 011111 1111 379999999
Q ss_pred CCCcchHHHHhh-CCCCCEEE
Q 015441 137 LPHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 137 l~~~~s~~~~~~-l~~G~~VI 156 (406)
+|+..-.+++.+ +++|+.|+
T Consensus 74 tp~~~H~~~~~~al~~GkhVl 94 (334)
T 3ohs_X 74 TQHPQHKAAVMLCLAAGKAVL 94 (334)
T ss_dssp CCGGGHHHHHHHHHHTTCEEE
T ss_pred CCcHHHHHHHHHHHhcCCEEE
Confidence 999887787765 58898776
No 88
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=97.12 E-value=0.00075 Score=59.71 Aligned_cols=31 Identities=19% Similarity=0.450 Sum_probs=26.5
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
++|.|.||||++|+.+++.|.+.. .+++.+.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~ 34 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAG-YEVTVLV 34 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEE
Confidence 589999999999999999998764 5777665
No 89
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.12 E-value=0.00026 Score=69.76 Aligned_cols=93 Identities=17% Similarity=0.235 Sum_probs=59.2
Q ss_pred cCCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccC--CCCCEEEEc
Q 015441 60 SEKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCC 136 (406)
Q Consensus 60 ~~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~a 136 (406)
+.+++||+|+| +|.+|+.+++.|..+|.++++++.+++.. .+.+...++. . .....+.+. ++.+ .++|+|+.|
T Consensus 3 ~~~~~~vgiiG-~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~-~-~~~~~~~~~-~~ll~~~~~D~V~i~ 78 (362)
T 1ydw_A 3 TETQIRIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNY-P-ESTKIHGSY-ESLLEDPEIDALYVP 78 (362)
T ss_dssp ---CEEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTC-C-TTCEEESSH-HHHHHCTTCCEEEEC
T ss_pred CCCceEEEEEC-chHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCC-C-CCCeeeCCH-HHHhcCCCCCEEEEc
Confidence 34568999999 69999999999999999999999875431 1111111110 0 000111111 1112 368999999
Q ss_pred CCCcchHHHHhh-CCCCCEEE
Q 015441 137 LPHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 137 l~~~~s~~~~~~-l~~G~~VI 156 (406)
+|+..-.+++.+ +++|+.|+
T Consensus 79 tp~~~h~~~~~~al~aGk~V~ 99 (362)
T 1ydw_A 79 LPTSLHVEWAIKAAEKGKHIL 99 (362)
T ss_dssp CCGGGHHHHHHHHHTTTCEEE
T ss_pred CChHHHHHHHHHHHHCCCeEE
Confidence 999888787765 58898776
No 90
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.11 E-value=0.00047 Score=66.69 Aligned_cols=85 Identities=18% Similarity=0.327 Sum_probs=57.3
Q ss_pred ccEEEEECcccHHHHH-HHHHHHcCCCceEEEEeccCcCC-ccccccccCccccCCCcccccCcccC-CCCCEEEEcCCC
Q 015441 63 QVRIGLLGASGYTGAE-IVRLLANHPYFGIKLMTADRKAG-QSIGSVFPHLISQDLPTMVAVKDADF-SNVDAVFCCLPH 139 (406)
Q Consensus 63 ~ikVaIvGATG~vG~e-LlrlL~~hp~~elv~l~s~~~~G-~~i~~v~p~l~~~~~~~~~~~~~~~~-~~vDvVF~al~~ 139 (406)
++||+|+| +|.+|+. +++.|..+|.++++++.++...- +.+...+ + .+..... +++ .++|+|+.|+|+
T Consensus 5 ~~~vgiiG-~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~----g--~~~~~~~--~~l~~~~D~V~i~tp~ 75 (319)
T 1tlt_A 5 KLRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESW----R--IPYADSL--SSLAASCDAVFVHSST 75 (319)
T ss_dssp CEEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHH----T--CCBCSSH--HHHHTTCSEEEECSCT
T ss_pred cceEEEEC-CCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHc----C--CCccCcH--HHhhcCCCEEEEeCCc
Confidence 57999999 5999996 99999888999999998754321 1111111 1 1111111 112 478999999998
Q ss_pred cchHHHHhh-CCCCCEEE
Q 015441 140 GTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 140 ~~s~~~~~~-l~~G~~VI 156 (406)
..-.+++.. +++|+.|+
T Consensus 76 ~~h~~~~~~al~~G~~v~ 93 (319)
T 1tlt_A 76 ASHFDVVSTLLNAGVHVC 93 (319)
T ss_dssp THHHHHHHHHHHTTCEEE
T ss_pred hhHHHHHHHHHHcCCeEE
Confidence 877777764 57888655
No 91
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.11 E-value=0.00026 Score=68.49 Aligned_cols=86 Identities=19% Similarity=0.253 Sum_probs=58.1
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccC--CCCCEEEEcC
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCCL 137 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~al 137 (406)
.+++||+|+| +|.+|+.+++.|.++|.++++++.++... .+.+.. . .+.+.+. ++.+ .++|+|+.|+
T Consensus 8 ~~~~~igiIG-~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~-------~-~~~~~~~-~~~l~~~~~D~V~i~t 77 (315)
T 3c1a_A 8 NSPVRLALIG-AGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPP-------G-CVIESDW-RSVVSAPEVEAVIIAT 77 (315)
T ss_dssp -CCEEEEEEE-CTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCT-------T-CEEESST-HHHHTCTTCCEEEEES
T ss_pred CCcceEEEEC-CcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHh-------h-CcccCCH-HHHhhCCCCCEEEEeC
Confidence 4568999999 69999999999998899999999875421 011110 0 1111111 1112 3789999999
Q ss_pred CCcchHHHHhh-CCCCCEEE
Q 015441 138 PHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 138 ~~~~s~~~~~~-l~~G~~VI 156 (406)
|+..-.+++.. +++|+.|+
T Consensus 78 p~~~h~~~~~~al~~Gk~v~ 97 (315)
T 3c1a_A 78 PPATHAEITLAAIASGKAVL 97 (315)
T ss_dssp CGGGHHHHHHHHHHTTCEEE
T ss_pred ChHHHHHHHHHHHHCCCcEE
Confidence 99887777765 57888665
No 92
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=97.09 E-value=0.0007 Score=60.71 Aligned_cols=91 Identities=18% Similarity=0.306 Sum_probs=53.0
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCcc--ccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLI--SQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~--~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
|||.|.||||++|+.|++.|++.. .+++.+..+.. +.....+.+. ..|+. +.+...+.++|+||.|++...
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~---~~~~~~~~~~~~~~D~~---d~~~~~~~~~d~vi~~ag~~~ 73 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG-HEVTAIVRNAG---KITQTHKDINILQKDIF---DLTLSDLSDQNVVVDAYGISP 73 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCSH---HHHHHCSSSEEEECCGG---GCCHHHHTTCSEEEECCCSST
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC-CEEEEEEcCch---hhhhccCCCeEEecccc---ChhhhhhcCCCEEEECCcCCc
Confidence 479999999999999999998764 57777753221 1111001111 11221 111134578999999997642
Q ss_pred h---------HHHHhhC-CC-CCEEEEcCCc
Q 015441 142 T---------QEIIKGL-PK-SLKIVDLSAD 161 (406)
Q Consensus 142 s---------~~~~~~l-~~-G~~VIDlSa~ 161 (406)
. +.+++++ ++ ..++|-.|+.
T Consensus 74 ~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~ 104 (221)
T 3ew7_A 74 DEAEKHVTSLDHLISVLNGTVSPRLLVVGGA 104 (221)
T ss_dssp TTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred cccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence 2 3444544 34 3566656654
No 93
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.09 E-value=0.0002 Score=70.40 Aligned_cols=88 Identities=13% Similarity=0.160 Sum_probs=59.5
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcC-CCceEEEEeccCcCC-ccccccccCccccCCCcccccCcccC--CCCCEEEEc
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANH-PYFGIKLMTADRKAG-QSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCC 136 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~h-p~~elv~l~s~~~~G-~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~a 136 (406)
.+|+||+|+| +|.+|+..++.|..+ |.++++++.++...- +.+...+ + +..+.+. ++.+ .++|+|+.|
T Consensus 11 ~~~~rvgiiG-~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~----~--~~~~~~~-~~ll~~~~~D~V~i~ 82 (354)
T 3q2i_A 11 DRKIRFALVG-CGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERT----G--ARGHASL-TDMLAQTDADIVILT 82 (354)
T ss_dssp SSCEEEEEEC-CSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHH----C--CEEESCH-HHHHHHCCCSEEEEC
T ss_pred CCcceEEEEc-CcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHc----C--CceeCCH-HHHhcCCCCCEEEEC
Confidence 3568999999 799999999999987 899999998754311 1111111 0 1111111 1112 379999999
Q ss_pred CCCcchHHHHhh-CCCCCEEE
Q 015441 137 LPHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 137 l~~~~s~~~~~~-l~~G~~VI 156 (406)
+|+..-.+++.+ +++|+.|+
T Consensus 83 tp~~~h~~~~~~al~~gk~v~ 103 (354)
T 3q2i_A 83 TPSGLHPTQSIECSEAGFHVM 103 (354)
T ss_dssp SCGGGHHHHHHHHHHTTCEEE
T ss_pred CCcHHHHHHHHHHHHCCCCEE
Confidence 999887777764 58888776
No 94
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.08 E-value=0.00046 Score=66.92 Aligned_cols=87 Identities=13% Similarity=0.296 Sum_probs=58.4
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccC-CCCCEEEEcCCCc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADF-SNVDAVFCCLPHG 140 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~-~~vDvVF~al~~~ 140 (406)
|+||+|+| .|.+|+.+++.|..+|.++++++.+++.. .+.+...++. ...+.+. ++.+ .++|+|+.|+|+.
T Consensus 1 ~~~vgiiG-~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~-----~~~~~~~-~~~l~~~~D~V~i~tp~~ 73 (325)
T 2ho3_A 1 MLKLGVIG-TGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQN-----IQLFDQL-EVFFKSSFDLVYIASPNS 73 (325)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSS-----CEEESCH-HHHHTSSCSEEEECSCGG
T ss_pred CeEEEEEe-CCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCC-----CeEeCCH-HHHhCCCCCEEEEeCChH
Confidence 57999999 69999999999998999999999875431 1112211110 0011111 1112 4789999999988
Q ss_pred chHHHHhh-CCCCCEEE
Q 015441 141 TTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 141 ~s~~~~~~-l~~G~~VI 156 (406)
.-.+++.+ +++|+.|+
T Consensus 74 ~h~~~~~~al~~gk~V~ 90 (325)
T 2ho3_A 74 LHFAQAKAALSAGKHVI 90 (325)
T ss_dssp GHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHcCCcEE
Confidence 77777764 58888665
No 95
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.07 E-value=0.001 Score=65.61 Aligned_cols=84 Identities=12% Similarity=0.156 Sum_probs=57.7
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCC--------CceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEE
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHP--------YFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVF 134 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp--------~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF 134 (406)
++||+|+| +|.+|+.+++.|.+++ .++++++++++.. +. .. +.. . ....+. ++.+ ++|+|+
T Consensus 3 ~irvgIiG-~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~-~~-~~----~~~-~-~~~~d~-~~ll-~iDvVv 71 (332)
T 2ejw_A 3 ALKIALLG-GGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPR-KP-RA----IPQ-E-LLRAEP-FDLL-EADLVV 71 (332)
T ss_dssp EEEEEEEC-CSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTT-SC-CS----SCG-G-GEESSC-CCCT-TCSEEE
T ss_pred eeEEEEEc-CCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHH-Hh-hc----cCc-c-cccCCH-HHHh-CCCEEE
Confidence 58999999 9999999999999877 6899999876532 11 00 100 0 001111 1223 899999
Q ss_pred EcCCCc-chHHHHh-hCCCCCEEEE
Q 015441 135 CCLPHG-TTQEIIK-GLPKSLKIVD 157 (406)
Q Consensus 135 ~al~~~-~s~~~~~-~l~~G~~VID 157 (406)
.|+|+. ...+++. ++++|+.||-
T Consensus 72 e~t~~~~~a~~~~~~AL~aGKhVVt 96 (332)
T 2ejw_A 72 EAMGGVEAPLRLVLPALEAGIPLIT 96 (332)
T ss_dssp ECCCCSHHHHHHHHHHHHTTCCEEE
T ss_pred ECCCCcHHHHHHHHHHHHcCCeEEE
Confidence 999977 4566765 5789998883
No 96
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=97.01 E-value=0.00027 Score=67.28 Aligned_cols=92 Identities=12% Similarity=0.206 Sum_probs=52.2
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG 140 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~ 140 (406)
||+||+|+| .|.+|+.+++.|... .+++.+.+++.. -+.+...+ +. ...+. .+...++|+||+|+|..
T Consensus 1 M~m~I~iIG-~G~mG~~la~~l~~~--~~v~~v~~~~~~~~~~~~~~~----g~---~~~~~-~~~~~~~DvVilav~~~ 69 (276)
T 2i76_A 1 MSLVLNFVG-TGTLTRFFLECLKDR--YEIGYILSRSIDRARNLAEVY----GG---KAATL-EKHPELNGVVFVIVPDR 69 (276)
T ss_dssp ---CCEEES-CCHHHHHHHHTTC------CCCEECSSHHHHHHHHHHT----CC---CCCSS-CCCCC---CEEECSCTT
T ss_pred CCceEEEEe-CCHHHHHHHHHHHHc--CcEEEEEeCCHHHHHHHHHHc----CC---ccCCH-HHHHhcCCEEEEeCChH
Confidence 457999999 699999999988765 566445554321 01111111 10 11111 12245789999999998
Q ss_pred chHHHHhhC-CCCCEEEEcCCcccC
Q 015441 141 TTQEIIKGL-PKSLKIVDLSADFRL 164 (406)
Q Consensus 141 ~s~~~~~~l-~~G~~VIDlSa~fRl 164 (406)
...++++.+ ..+..|||.|+....
T Consensus 70 ~~~~v~~~l~~~~~ivi~~s~~~~~ 94 (276)
T 2i76_A 70 YIKTVANHLNLGDAVLVHCSGFLSS 94 (276)
T ss_dssp THHHHHTTTCCSSCCEEECCSSSCG
T ss_pred HHHHHHHHhccCCCEEEECCCCCcH
Confidence 877777766 457788999976543
No 97
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.00 E-value=0.00051 Score=66.96 Aligned_cols=89 Identities=18% Similarity=0.201 Sum_probs=58.4
Q ss_pred CCccEEEEECcccHHHHHHHHHHH-cCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccC--CCCCEEEEc
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLA-NHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCC 136 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~-~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~a 136 (406)
.+++||+|+| +|.+|+..++.|. .++.++++++.++... .+.+...+ +.. ..+.+. .+.+ .++|+|+.|
T Consensus 6 ~~~~~v~iiG-~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~----g~~-~~~~~~-~~~l~~~~~D~V~i~ 78 (346)
T 3cea_A 6 RKPLRAAIIG-LGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNEL----GVE-TTYTNY-KDMIDTENIDAIFIV 78 (346)
T ss_dssp CCCEEEEEEC-CSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTT----CCS-EEESCH-HHHHTTSCCSEEEEC
T ss_pred CCcceEEEEc-CCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHh----CCC-cccCCH-HHHhcCCCCCEEEEe
Confidence 4568999999 6999999999998 8899999999875431 11111111 000 011111 1112 268999999
Q ss_pred CCCcchHHHHhh-CCCCCEEE
Q 015441 137 LPHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 137 l~~~~s~~~~~~-l~~G~~VI 156 (406)
+|+..-.+++.. +++|+.|+
T Consensus 79 tp~~~h~~~~~~al~~G~~v~ 99 (346)
T 3cea_A 79 APTPFHPEMTIYAMNAGLNVF 99 (346)
T ss_dssp SCGGGHHHHHHHHHHTTCEEE
T ss_pred CChHhHHHHHHHHHHCCCEEE
Confidence 999877777754 57888766
No 98
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.97 E-value=0.00079 Score=66.46 Aligned_cols=87 Identities=18% Similarity=0.237 Sum_probs=58.3
Q ss_pred ccEEEEECcccHHHHH-HHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccC--CCCCEEEEcCC
Q 015441 63 QVRIGLLGASGYTGAE-IVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCCLP 138 (406)
Q Consensus 63 ~ikVaIvGATG~vG~e-LlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~al~ 138 (406)
++||+||| +|.+|+. +++.|..+|.++++++.++... .+.+...++. ...+.++ ++.+ .++|+|+.|+|
T Consensus 5 ~~rigiIG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~-----~~~~~~~-~~ll~~~~vD~V~i~tp 77 (359)
T 3m2t_A 5 LIKVGLVG-IGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISD-----IPVLDNV-PAMLNQVPLDAVVMAGP 77 (359)
T ss_dssp CEEEEEEC-CSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCS-----CCEESSH-HHHHHHSCCSEEEECSC
T ss_pred cceEEEEC-CCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCC-----CcccCCH-HHHhcCCCCCEEEEcCC
Confidence 47999999 8999986 8999999999999999875431 1122211111 0111111 1111 36899999999
Q ss_pred CcchHHHHhh-CCCCCEEE
Q 015441 139 HGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 139 ~~~s~~~~~~-l~~G~~VI 156 (406)
+..-.+++.+ +++|+.|+
T Consensus 78 ~~~H~~~~~~al~aGkhVl 96 (359)
T 3m2t_A 78 PQLHFEMGLLAMSKGVNVF 96 (359)
T ss_dssp HHHHHHHHHHHHHTTCEEE
T ss_pred cHHHHHHHHHHHHCCCeEE
Confidence 8877777764 58898776
No 99
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=96.96 E-value=0.00077 Score=65.34 Aligned_cols=87 Identities=14% Similarity=0.188 Sum_probs=55.9
Q ss_pred CccEEEEECcccHHHHH-HHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccC-CCCCEEEEcCC
Q 015441 62 KQVRIGLLGASGYTGAE-IVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADF-SNVDAVFCCLP 138 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~e-LlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~-~~vDvVF~al~ 138 (406)
||+||+||| +|.+|+. +++.|..+|.++++ +.++... .+.+...++ . .. .+.+. .+.+ .++|+|+.|+|
T Consensus 1 m~~~igiIG-~G~ig~~~~~~~l~~~~~~~l~-v~d~~~~~~~~~a~~~g---~-~~-~~~~~-~~~l~~~~D~V~i~tp 72 (323)
T 1xea_A 1 MSLKIAMIG-LGDIAQKAYLPVLAQWPDIELV-LCTRNPKVLGTLATRYR---V-SA-TCTDY-RDVLQYGVDAVMIHAA 72 (323)
T ss_dssp -CEEEEEEC-CCHHHHHTHHHHHTTSTTEEEE-EECSCHHHHHHHHHHTT---C-CC-CCSST-TGGGGGCCSEEEECSC
T ss_pred CCcEEEEEC-CCHHHHHHHHHHHHhCCCceEE-EEeCCHHHHHHHHHHcC---C-Cc-cccCH-HHHhhcCCCEEEEECC
Confidence 568999999 6999984 99999888999999 8765421 111111111 0 00 01111 1122 47899999999
Q ss_pred CcchHHHHh-hCCCCCEEE
Q 015441 139 HGTTQEIIK-GLPKSLKIV 156 (406)
Q Consensus 139 ~~~s~~~~~-~l~~G~~VI 156 (406)
+..-.+++. ++++|+.|+
T Consensus 73 ~~~h~~~~~~al~~Gk~V~ 91 (323)
T 1xea_A 73 TDVHSTLAAFFLHLGIPTF 91 (323)
T ss_dssp GGGHHHHHHHHHHTTCCEE
T ss_pred chhHHHHHHHHHHCCCeEE
Confidence 888777775 457887655
No 100
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=96.94 E-value=0.00055 Score=69.63 Aligned_cols=93 Identities=17% Similarity=0.145 Sum_probs=59.1
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCC-ccccccccCccccCCCccc----ccCcccC--CCCCEEE
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAG-QSIGSVFPHLISQDLPTMV----AVKDADF--SNVDAVF 134 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G-~~i~~v~p~l~~~~~~~~~----~~~~~~~--~~vDvVF 134 (406)
+++||+||| +|.+|+..++.|..+|.++++++.++...- +.+...+..+.......+. +. ++.+ .++|+|+
T Consensus 19 ~~~rvgiIG-~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~-~~ll~~~~vD~V~ 96 (444)
T 2ixa_A 19 KKVRIAFIA-VGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDY-KNMLKDKNIDAVF 96 (444)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTH-HHHTTCTTCCEEE
T ss_pred CCceEEEEe-cCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCH-HHHhcCCCCCEEE
Confidence 458999999 899999999999999999999999754311 1111100000000000111 11 1112 3689999
Q ss_pred EcCCCcchHHHHhh-CCCCCEEE
Q 015441 135 CCLPHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 135 ~al~~~~s~~~~~~-l~~G~~VI 156 (406)
.|+|+..-.+++.+ +++|+.|+
T Consensus 97 i~tp~~~h~~~~~~al~aGkhV~ 119 (444)
T 2ixa_A 97 VSSPWEWHHEHGVAAMKAGKIVG 119 (444)
T ss_dssp ECCCGGGHHHHHHHHHHTTCEEE
T ss_pred EcCCcHHHHHHHHHHHHCCCeEE
Confidence 99998877777754 68898776
No 101
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=96.92 E-value=0.00077 Score=68.47 Aligned_cols=93 Identities=13% Similarity=0.210 Sum_probs=59.1
Q ss_pred CCccEEEEECcccHHHH-HHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccC--CCCCEEEEc
Q 015441 61 EKQVRIGLLGASGYTGA-EIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCC 136 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~-eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~a 136 (406)
.+++||+||| +|.+|+ .+++.|..++.++++++.++... .+.+...++. .......+.+. ++.+ .++|+|+.|
T Consensus 81 ~~~irigiIG-~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~-~~~~~~~~~~~-~~ll~~~~vD~V~ia 157 (433)
T 1h6d_A 81 DRRFGYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGV-DPRKIYDYSNF-DKIAKDPKIDAVYII 157 (433)
T ss_dssp CCCEEEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTC-CGGGEECSSSG-GGGGGCTTCCEEEEC
T ss_pred CCceEEEEEC-CcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCC-CcccccccCCH-HHHhcCCCCCEEEEc
Confidence 3458999999 699997 89999988899999999875431 1111111110 00000011111 1112 378999999
Q ss_pred CCCcchHHHHhh-CCCCCEEE
Q 015441 137 LPHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 137 l~~~~s~~~~~~-l~~G~~VI 156 (406)
+|+..-.+++.. +++|+.|+
T Consensus 158 tp~~~h~~~~~~al~aGk~Vl 178 (433)
T 1h6d_A 158 LPNSLHAEFAIRAFKAGKHVM 178 (433)
T ss_dssp SCGGGHHHHHHHHHHTTCEEE
T ss_pred CCchhHHHHHHHHHHCCCcEE
Confidence 999887777764 58898766
No 102
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=96.92 E-value=0.00062 Score=66.48 Aligned_cols=34 Identities=15% Similarity=0.343 Sum_probs=29.1
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEec
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTA 96 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s 96 (406)
|++|.|.||||++|+.|++.|.+.+..+++.+..
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r 57 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDM 57 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeC
Confidence 4689999999999999999998766678887763
No 103
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.91 E-value=0.00061 Score=67.01 Aligned_cols=92 Identities=14% Similarity=0.201 Sum_probs=56.5
Q ss_pred ccEEEEECcccHHHHHHHHHHHcC--------CCceEEEEeccCcCC-ccccccccCccc--cCCCcccccCccc-C--C
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANH--------PYFGIKLMTADRKAG-QSIGSVFPHLIS--QDLPTMVAVKDAD-F--S 128 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~h--------p~~elv~l~s~~~~G-~~i~~v~p~l~~--~~~~~~~~~~~~~-~--~ 128 (406)
|+||+|+| +|.+|+.+++.|.++ +.++++++++++..- ..++. -.++.. .........+.++ + .
T Consensus 2 mirvgIiG-~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~-~~~~~~~~~~~~~~~~~d~~~ll~~~ 79 (327)
T 3do5_A 2 MIKIAIVG-FGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSL-VEALRMKRETGMLRDDAKAIEVVRSA 79 (327)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCH-HHHHHHHHHHSSCSBCCCHHHHHHHS
T ss_pred cEEEEEEe-ccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCH-HHHHhhhccCccccCCCCHHHHhcCC
Confidence 68999999 999999999999987 899999999764211 00100 000000 0000000001111 1 4
Q ss_pred CCCEEEEcCCCcc----hHHHHh-hCCCCCEEE
Q 015441 129 NVDAVFCCLPHGT----TQEIIK-GLPKSLKIV 156 (406)
Q Consensus 129 ~vDvVF~al~~~~----s~~~~~-~l~~G~~VI 156 (406)
++|+|+.|+|+.. +.++.. ++++|+.||
T Consensus 80 ~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv 112 (327)
T 3do5_A 80 DYDVLIEASVTRVDGGEGVNYIREALKRGKHVV 112 (327)
T ss_dssp CCSEEEECCCCC----CHHHHHHHHHTTTCEEE
T ss_pred CCCEEEECCCCcccchhHHHHHHHHHHCCCeEE
Confidence 6899999999764 355554 579999888
No 104
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=96.89 E-value=0.002 Score=62.59 Aligned_cols=96 Identities=15% Similarity=0.122 Sum_probs=57.1
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCccc-ccCcccCCCCCEEEEcCC
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMV-AVKDADFSNVDAVFCCLP 138 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~-~~~~~~~~~vDvVF~al~ 138 (406)
.|++||+|+| +|++|..+.+.|.+....++... +++.. -.+.......+..... .. .. .+...++|+||+|+|
T Consensus 22 ~M~m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~~-dr~~~~~~~~~~~~~~~~~~g~--~~~s~-~e~~~~aDvVi~avp 96 (317)
T 4ezb_A 22 SMMTTIAFIG-FGEAAQSIAGGLGGRNAARLAAY-DLRFNDPAASGALRARAAELGV--EPLDD-VAGIACADVVLSLVV 96 (317)
T ss_dssp TSCCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEE-CGGGGCTTTHHHHHHHHHHTTC--EEESS-GGGGGGCSEEEECCC
T ss_pred ccCCeEEEEC-ccHHHHHHHHHHHHcCCCeEEEE-eCCCccccchHHHHHHHHHCCC--CCCCH-HHHHhcCCEEEEecC
Confidence 4667999999 99999999999987642466544 33320 0000000000000011 11 11 233467999999999
Q ss_pred CcchHHHHh----hCCCCCEEEEcCCc
Q 015441 139 HGTTQEIIK----GLPKSLKIVDLSAD 161 (406)
Q Consensus 139 ~~~s~~~~~----~l~~G~~VIDlSa~ 161 (406)
.....+.+. .+..|..|||.|+-
T Consensus 97 ~~~~~~~~~~i~~~l~~~~ivv~~st~ 123 (317)
T 4ezb_A 97 GAATKAVAASAAPHLSDEAVFIDLNSV 123 (317)
T ss_dssp GGGHHHHHHHHGGGCCTTCEEEECCSC
T ss_pred CHHHHHHHHHHHhhcCCCCEEEECCCC
Confidence 887655443 34568899999874
No 105
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=96.87 E-value=0.00067 Score=63.44 Aligned_cols=90 Identities=19% Similarity=0.367 Sum_probs=56.3
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
|+||+|+| +|.+|+.+++.|.... .++ .+.+++.. -+.+...+ + +....+. .+.+.++|+||.|+|...
T Consensus 3 ~m~i~iiG-~G~mG~~~a~~l~~~g-~~v-~~~~~~~~~~~~~~~~~----g--~~~~~~~-~~~~~~~D~Vi~~v~~~~ 72 (259)
T 2ahr_A 3 AMKIGIIG-VGKMASAIIKGLKQTP-HEL-IISGSSLERSKEIAEQL----A--LPYAMSH-QDLIDQVDLVILGIKPQL 72 (259)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHTTSS-CEE-EEECSSHHHHHHHHHHH----T--CCBCSSH-HHHHHTCSEEEECSCGGG
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhCC-CeE-EEECCCHHHHHHHHHHc----C--CEeeCCH-HHHHhcCCEEEEEeCcHh
Confidence 46999999 8999999999998765 344 45544321 01111100 1 1111111 122357999999999776
Q ss_pred hHHHHhhCCCCCEEEEcCCcc
Q 015441 142 TQEIIKGLPKSLKIVDLSADF 162 (406)
Q Consensus 142 s~~~~~~l~~G~~VIDlSa~f 162 (406)
..+....+.+|..|||.++..
T Consensus 73 ~~~v~~~l~~~~~vv~~~~~~ 93 (259)
T 2ahr_A 73 FETVLKPLHFKQPIISMAAGI 93 (259)
T ss_dssp HHHHHTTSCCCSCEEECCTTC
T ss_pred HHHHHHHhccCCEEEEeCCCC
Confidence 677776676788899987654
No 106
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=96.86 E-value=0.0013 Score=60.49 Aligned_cols=94 Identities=18% Similarity=0.265 Sum_probs=59.3
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
+|+||+|+| +|.+|+.+++.|.+.. .++..+.+++.. +.......+ + .... ..+.+...++|+||+|+|...
T Consensus 22 ~mmkI~IIG-~G~mG~~la~~l~~~g-~~V~~v~~r~~~--~~~~l~~~~-g--~~~~-~~~~~~~~~aDvVilavp~~~ 93 (220)
T 4huj_A 22 SMTTYAIIG-AGAIGSALAERFTAAQ-IPAIIANSRGPA--SLSSVTDRF-G--ASVK-AVELKDALQADVVILAVPYDS 93 (220)
T ss_dssp GSCCEEEEE-CHHHHHHHHHHHHHTT-CCEEEECTTCGG--GGHHHHHHH-T--TTEE-ECCHHHHTTSSEEEEESCGGG
T ss_pred cCCEEEEEC-CCHHHHHHHHHHHhCC-CEEEEEECCCHH--HHHHHHHHh-C--CCcc-cChHHHHhcCCEEEEeCChHH
Confidence 357999999 9999999999998653 466664554321 111100000 1 1101 111223468999999999887
Q ss_pred hHHHHhhCC--CCCEEEEcCCccc
Q 015441 142 TQEIIKGLP--KSLKIVDLSADFR 163 (406)
Q Consensus 142 s~~~~~~l~--~G~~VIDlSa~fR 163 (406)
..+.++.+. .+..|||.++.+-
T Consensus 94 ~~~v~~~l~~~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 94 IADIVTQVSDWGGQIVVDASNAID 117 (220)
T ss_dssp HHHHHTTCSCCTTCEEEECCCCBC
T ss_pred HHHHHHHhhccCCCEEEEcCCCCC
Confidence 777776652 4678999998763
No 107
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=96.86 E-value=0.00086 Score=64.64 Aligned_cols=91 Identities=14% Similarity=0.183 Sum_probs=58.9
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCC--CCCEEEEcCC
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFS--NVDAVFCCLP 138 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~--~vDvVF~al~ 138 (406)
++.+||+|+|+||..|+.+++.|.++ .+++++..+....|+.+ + + ++.+..+ .+... ++|+++.|+|
T Consensus 5 ~~~~rVaViG~sG~~G~~~~~~l~~~-g~~~V~~V~p~~~g~~~---~----G--~~vy~sl-~el~~~~~~D~viI~tP 73 (288)
T 2nu8_A 5 DKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTH---L----G--LPVFNTV-REAVAATGATASVIYVP 73 (288)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTTCEE---T----T--EEEESSH-HHHHHHHCCCEEEECCC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCCccccee---C----C--eeccCCH-HHHhhcCCCCEEEEecC
Confidence 34579999999999999999988876 46776665554333321 1 1 1111111 11112 6899999999
Q ss_pred CcchHHHHhh-CCCCCEE-EEcCCcc
Q 015441 139 HGTTQEIIKG-LPKSLKI-VDLSADF 162 (406)
Q Consensus 139 ~~~s~~~~~~-l~~G~~V-IDlSa~f 162 (406)
+....+.+.. +++|+++ |=.+..|
T Consensus 74 ~~~~~~~~~ea~~~Gi~~iVi~t~G~ 99 (288)
T 2nu8_A 74 APFCKDSILEAIDAGIKLIITITEGI 99 (288)
T ss_dssp GGGHHHHHHHHHHTTCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 9988888875 4778753 4355544
No 108
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=96.81 E-value=0.00064 Score=67.68 Aligned_cols=93 Identities=16% Similarity=0.193 Sum_probs=55.8
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCC---CceEEEEeccCcCCccccccccCccc-cCCCc-cccc-----Cccc----
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHP---YFGIKLMTADRKAGQSIGSVFPHLIS-QDLPT-MVAV-----KDAD---- 126 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp---~~elv~l~s~~~~G~~i~~v~p~l~~-~~~~~-~~~~-----~~~~---- 126 (406)
.+++||+|+| .|.||+.+++.|.+++ .++++++++++. ..+..-+|.+.. .++.. +... +.+.
T Consensus 2 ~k~i~vgIiG-~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~--~~~~~~~~gi~~~~~~~e~l~~~~~~~~did~v~e~ 78 (358)
T 1ebf_A 2 TKVVNVAVIG-AGVVGSAFLDQLLAMKSTITYNLVLLAEAER--SLISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAH 78 (358)
T ss_dssp CSEEEEEEEC-CSHHHHHHHHHHHHCCCSSEEEEEEEECSSB--EEECSSCSCCSCTTCHHHHHHTCCCBCCCHHHHHHH
T ss_pred CceEEEEEEe-cCHHHHHHHHHHHhcCCCCCEEEEEEEECCh--hhhccccCCCCccccHHHHHhcccCCCCCHHHHHHH
Confidence 3568999999 9999999999999876 689999987532 112111111100 00000 0000 0000
Q ss_pred ---CCCCCEEEEcCCCcch-HHHHhhCCCCCEEE
Q 015441 127 ---FSNVDAVFCCLPHGTT-QEIIKGLPKSLKIV 156 (406)
Q Consensus 127 ---~~~vDvVF~al~~~~s-~~~~~~l~~G~~VI 156 (406)
....|+|+.|+|+..- ..+.+++++|+.||
T Consensus 79 ~~~~~~~DvVV~~t~~~~~a~~~~~AL~aGkhVV 112 (358)
T 1ebf_A 79 LKTSPKPVILVDNTSSAYIAGFYTKFVENGISIA 112 (358)
T ss_dssp HTTCSSCEEEEECSCCHHHHTTHHHHHHTTCEEE
T ss_pred hhhccCCcEEEEcCCChHHHHHHHHHHHCCCeEE
Confidence 0134899999997643 33445578999988
No 109
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=96.81 E-value=0.00079 Score=65.91 Aligned_cols=91 Identities=21% Similarity=0.324 Sum_probs=59.3
Q ss_pred ccCCccEEEEECccc-HHHHHHHHHHHcC-CCceEEEEeccCcC-CccccccccCccccCCCcccccCcccC--CCCCEE
Q 015441 59 KSEKQVRIGLLGASG-YTGAEIVRLLANH-PYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAV 133 (406)
Q Consensus 59 ~~~~~ikVaIvGATG-~vG~eLlrlL~~h-p~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvV 133 (406)
++.+++||+|+| +| .+|+..++.|... |.++++++.++... .+.+...++. ...+.++ .+.+ .++|+|
T Consensus 14 ~~~~~irvgiIG-~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~-----~~~~~~~-~~ll~~~~vD~V 86 (340)
T 1zh8_A 14 KPLRKIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGN-----PAVFDSY-EELLESGLVDAV 86 (340)
T ss_dssp --CCCEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSS-----CEEESCH-HHHHHSSCCSEE
T ss_pred CCCCceeEEEEe-cCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCC-----CcccCCH-HHHhcCCCCCEE
Confidence 456679999999 77 8999999999988 89999999975431 1111111110 0011111 1111 368999
Q ss_pred EEcCCCcchHHHHhh-CCCCCEEE
Q 015441 134 FCCLPHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 134 F~al~~~~s~~~~~~-l~~G~~VI 156 (406)
+.|+|+..-.+++.+ +++|+.|+
T Consensus 87 ~i~tp~~~H~~~~~~al~aGkhVl 110 (340)
T 1zh8_A 87 DLTLPVELNLPFIEKALRKGVHVI 110 (340)
T ss_dssp EECCCGGGHHHHHHHHHHTTCEEE
T ss_pred EEeCCchHHHHHHHHHHHCCCcEE
Confidence 999998877777764 58898776
No 110
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=96.78 E-value=0.0016 Score=62.43 Aligned_cols=72 Identities=15% Similarity=0.221 Sum_probs=39.9
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCc--cccCCCcccccCcccCCCCCEEEEcCCC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHL--ISQDLPTMVAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l--~~~~~~~~~~~~~~~~~~vDvVF~al~~ 139 (406)
++|.|.||||++|+.|++.|.+.. .+++.+..+....+.+.. +.+ ...|+.....+ ...+.++|+||.|.+.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~--~~~~~~~~Dl~d~~~~-~~~~~~~d~vih~a~~ 87 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG-HDLVLIHRPSSQIQRLAY--LEPECRVAEMLDHAGL-ERALRGLDGVIFSAGY 87 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECTTSCGGGGGG--GCCEEEECCTTCHHHH-HHHTTTCSEEEEC---
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CEEEEEecChHhhhhhcc--CCeEEEEecCCCHHHH-HHHHcCCCEEEECCcc
Confidence 589999999999999999998754 577766532221111110 001 01122111111 1234689999999874
No 111
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=96.76 E-value=0.00069 Score=64.80 Aligned_cols=95 Identities=14% Similarity=0.218 Sum_probs=51.2
Q ss_pred cCCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCC-cccccc-ccCc--cccCCCcccccCcccCCCCCEEEE
Q 015441 60 SEKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAG-QSIGSV-FPHL--ISQDLPTMVAVKDADFSNVDAVFC 135 (406)
Q Consensus 60 ~~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G-~~i~~v-~p~l--~~~~~~~~~~~~~~~~~~vDvVF~ 135 (406)
+.||.+|.|.||||++|+.+++.|++.. .+++.+..+.+.. +.+... .+.+ ...|+.....+ ...+.++|+||.
T Consensus 8 ~~m~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l-~~a~~~~d~vi~ 85 (318)
T 2r6j_A 8 NGMKSKILIFGGTGYIGNHMVKGSLKLG-HPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKL-VELMKKVDVVIS 85 (318)
T ss_dssp -CCCCCEEEETTTSTTHHHHHHHHHHTT-CCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHH-HHHHTTCSEEEE
T ss_pred cCCCCeEEEECCCchHHHHHHHHHHHCC-CcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHH-HHHHcCCCEEEE
Confidence 3455689999999999999999998764 5676665322111 001000 0000 01122111111 123468999999
Q ss_pred cCCCc---chHHHHhhC-CCC-C-EEE
Q 015441 136 CLPHG---TTQEIIKGL-PKS-L-KIV 156 (406)
Q Consensus 136 al~~~---~s~~~~~~l-~~G-~-~VI 156 (406)
+++.. ....+++++ ++| + ++|
T Consensus 86 ~a~~~~~~~~~~l~~aa~~~g~v~~~v 112 (318)
T 2r6j_A 86 ALAFPQILDQFKILEAIKVAGNIKRFL 112 (318)
T ss_dssp CCCGGGSTTHHHHHHHHHHHCCCCEEE
T ss_pred CCchhhhHHHHHHHHHHHhcCCCCEEE
Confidence 98742 234455544 345 4 566
No 112
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=96.76 E-value=0.00032 Score=68.58 Aligned_cols=90 Identities=8% Similarity=-0.001 Sum_probs=54.9
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc--CCccccccccCccccCCCcccccCcccC--CCCCEEEEcC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK--AGQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCCL 137 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~--~G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~al 137 (406)
||+||||+|+ |.+|+..++.| +|.++++++++++. ..+........+. .....+.++ ++.+ .++|+|+.|+
T Consensus 1 M~~rvgiiG~-G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~ll~~~~vD~V~I~t 75 (337)
T 3ip3_A 1 MSLKICVIGS-SGHFRYALEGL--DEECSITGIAPGVPEEDLSKLEKAISEMN-IKPKKYNNW-WEMLEKEKPDILVINT 75 (337)
T ss_dssp -CEEEEEECS-SSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHHHHHHTTT-CCCEECSSH-HHHHHHHCCSEEEECS
T ss_pred CceEEEEEcc-chhHHHHHHhc--CCCcEEEEEecCCchhhHHHHHHHHHHcC-CCCcccCCH-HHHhcCCCCCEEEEeC
Confidence 6799999995 55566888877 89999999998653 1222222111111 000111111 1112 3689999999
Q ss_pred CCcchHHHHhh-CCCCCEEE
Q 015441 138 PHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 138 ~~~~s~~~~~~-l~~G~~VI 156 (406)
|+..=.+++.+ +++|+.|+
T Consensus 76 p~~~H~~~~~~al~aGkhVl 95 (337)
T 3ip3_A 76 VFSLNGKILLEALERKIHAF 95 (337)
T ss_dssp SHHHHHHHHHHHHHTTCEEE
T ss_pred CcchHHHHHHHHHHCCCcEE
Confidence 98876776654 68898876
No 113
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=96.73 E-value=0.0017 Score=61.77 Aligned_cols=72 Identities=18% Similarity=0.266 Sum_probs=42.1
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~ 139 (406)
||++|.|.||||++|+.|++.|.+.. .+++.+... .....+..+. +...|+. ...+ ...+.++|+||.|++.
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~-~~~~~~~~~~--~~~~Dl~-~~~~-~~~~~~~d~Vih~a~~ 72 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDG-NTPIILTRS-IGNKAINDYE--YRVSDYT-LEDL-INQLNDVDAVVHLAAT 72 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESC-CC-----CCE--EEECCCC-HHHH-HHHTTTCSEEEECCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeCC-CCcccCCceE--EEEcccc-HHHH-HHhhcCCCEEEEcccc
Confidence 56799999999999999999998764 477666533 1111111000 0011222 1112 2234689999998874
No 114
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=96.71 E-value=0.00058 Score=68.47 Aligned_cols=92 Identities=14% Similarity=0.174 Sum_probs=57.0
Q ss_pred cccCCccEEEEECcccHHHHHHHHHHHcC--------CCceEEEEeccCcC-CccccccccCccccCCCcccccCcccC-
Q 015441 58 QKSEKQVRIGLLGASGYTGAEIVRLLANH--------PYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADF- 127 (406)
Q Consensus 58 ~~~~~~ikVaIvGATG~vG~eLlrlL~~h--------p~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~- 127 (406)
+++++++|||||| +|.+|+..++.|.+. +.++|++++++... .+.+..-++. . ..+.+. ++.+
T Consensus 21 ~~Ms~klrvgiIG-~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~----~-~~y~d~-~~ll~ 93 (412)
T 4gqa_A 21 QSMSARLNIGLIG-SGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGA----E-KAYGDW-RELVN 93 (412)
T ss_dssp ----CEEEEEEEC-CSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTC----S-EEESSH-HHHHH
T ss_pred ccccccceEEEEc-CcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCC----C-eEECCH-HHHhc
Confidence 3455679999999 899999988888653 35799999975431 1111111110 0 001111 1111
Q ss_pred -CCCCEEEEcCCCcchHHHHhh-CCCCCEEE
Q 015441 128 -SNVDAVFCCLPHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 128 -~~vDvVF~al~~~~s~~~~~~-l~~G~~VI 156 (406)
.++|+|+.|+|+..=.+++.+ +++|+.|+
T Consensus 94 ~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl 124 (412)
T 4gqa_A 94 DPQVDVVDITSPNHLHYTMAMAAIAAGKHVY 124 (412)
T ss_dssp CTTCCEEEECSCGGGHHHHHHHHHHTTCEEE
T ss_pred CCCCCEEEECCCcHHHHHHHHHHHHcCCCeE
Confidence 378999999998877777754 68998876
No 115
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=96.70 E-value=0.0014 Score=65.82 Aligned_cols=36 Identities=25% Similarity=0.451 Sum_probs=32.0
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCC-ceEEEEeccC
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPY-FGIKLMTADR 98 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~-~elv~l~s~~ 98 (406)
|+||+|+|+||-||+..++++.+||+ +++++++..+
T Consensus 4 m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~ 40 (388)
T 1r0k_A 4 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR 40 (388)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred ceEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCC
Confidence 58999999999999999999999997 9999885433
No 116
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=96.67 E-value=0.00072 Score=67.42 Aligned_cols=87 Identities=20% Similarity=0.357 Sum_probs=58.9
Q ss_pred CccEEEEECccc-HHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccC--CCCCEEEEcC
Q 015441 62 KQVRIGLLGASG-YTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCCL 137 (406)
Q Consensus 62 ~~ikVaIvGATG-~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~al 137 (406)
|++||+||| .| .+|+..++.|..+|.++++++.++... .+.+...+ .++.+.++ ++.+ .++|+|+.|+
T Consensus 1 ~~~rigiiG-~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~------g~~~~~~~-~ell~~~~vD~V~i~t 72 (387)
T 3moi_A 1 MKIRFGICG-LGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEY------GIPVFATL-AEMMQHVQMDAVYIAS 72 (387)
T ss_dssp CCEEEEEEC-CSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHH------TCCEESSH-HHHHHHSCCSEEEECS
T ss_pred CceEEEEEe-CCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHc------CCCeECCH-HHHHcCCCCCEEEEcC
Confidence 568999999 66 999999999999999999999875421 11111111 11111111 1111 3689999999
Q ss_pred CCcchHHHHhh-CCCCCEEE
Q 015441 138 PHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 138 ~~~~s~~~~~~-l~~G~~VI 156 (406)
|+..-.+++.+ +++|+.|+
T Consensus 73 p~~~H~~~~~~al~aGk~Vl 92 (387)
T 3moi_A 73 PHQFHCEHVVQASEQGLHII 92 (387)
T ss_dssp CGGGHHHHHHHHHHTTCEEE
T ss_pred CcHHHHHHHHHHHHCCCcee
Confidence 99877777764 58898776
No 117
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.63 E-value=0.0017 Score=60.04 Aligned_cols=94 Identities=15% Similarity=0.271 Sum_probs=64.9
Q ss_pred CCccEEEEECcccHHHHHHHHHHH-cCCCceEEEEeccCc---CCc-cccccccCccccCCCcc--cccCcccC--CCCC
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLA-NHPYFGIKLMTADRK---AGQ-SIGSVFPHLISQDLPTM--VAVKDADF--SNVD 131 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~-~hp~~elv~l~s~~~---~G~-~i~~v~p~l~~~~~~~~--~~~~~~~~--~~vD 131 (406)
+++.+|+|+| .|..|+.|++.+. ....++++++.++.. .|+ .+.- +++. .++ ++.. .++|
T Consensus 82 ~~~~~V~IvG-aG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~G---------vpV~~~~dL-~~~v~~~~Id 150 (212)
T 3keo_A 82 HSTTNVMLVG-CGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDG---------IPVYGISTI-NDHLIDSDIE 150 (212)
T ss_dssp TSCEEEEEEC-CSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTC---------CBEEEGGGH-HHHC-CCSCC
T ss_pred CCCCEEEEEC-cCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECC---------eEEeCHHHH-HHHHHHcCCC
Confidence 4457999999 5999999999753 346789999987543 344 3321 1111 111 1111 3789
Q ss_pred EEEEcCCCcchHHHHhhC-CCCCEEEEcCCcccCC
Q 015441 132 AVFCCLPHGTTQEIIKGL-PKSLKIVDLSADFRLR 165 (406)
Q Consensus 132 vVF~al~~~~s~~~~~~l-~~G~~VIDlSa~fRl~ 165 (406)
++++|+|...+++.+..+ ++|++-|-+-++.+++
T Consensus 151 ~vIIAvPs~~aq~v~d~lv~~GIk~I~nFap~~l~ 185 (212)
T 3keo_A 151 TAILTVPSTEAQEVADILVKAGIKGILSFSPVHLT 185 (212)
T ss_dssp EEEECSCGGGHHHHHHHHHHHTCCEEEECSSSCCC
T ss_pred EEEEecCchhHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999999998888888776 7899988777766664
No 118
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=96.63 E-value=0.0013 Score=61.43 Aligned_cols=96 Identities=16% Similarity=0.181 Sum_probs=50.8
Q ss_pred EEEEECcccHHHHHHHHHHHcC-CCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc---
Q 015441 65 RIGLLGASGYTGAEIVRLLANH-PYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG--- 140 (406)
Q Consensus 65 kVaIvGATG~vG~eLlrlL~~h-p~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~--- 140 (406)
||.|.||||++|+.|++.|.+. +..+++.+..+......+....-.+...|+.....+ ...+.++|+||.+++..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~-~~~~~~~d~vi~~a~~~~~~ 79 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAAL-TSALQGVEKLLLISSSEVGQ 79 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHH-HHHTTTCSEEEECC------
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHH-HHHHhCCCEEEEeCCCCchH
Confidence 5899999999999999999875 567887775322211111100000001122111111 12346899999988742
Q ss_pred ---chHHHHhhC-CCCC-EEEEcCCc
Q 015441 141 ---TTQEIIKGL-PKSL-KIVDLSAD 161 (406)
Q Consensus 141 ---~s~~~~~~l-~~G~-~VIDlSa~ 161 (406)
.+..+++++ +.|+ ++|-.|+.
T Consensus 80 ~~~~~~~l~~a~~~~~~~~~v~~Ss~ 105 (286)
T 2zcu_A 80 RAPQHRNVINAAKAAGVKFIAYTSLL 105 (286)
T ss_dssp --CHHHHHHHHHHHHTCCEEEEEEET
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 233444443 3353 56656653
No 119
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=96.63 E-value=0.0018 Score=62.52 Aligned_cols=92 Identities=12% Similarity=0.209 Sum_probs=54.0
Q ss_pred cCCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCC
Q 015441 60 SEKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 60 ~~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~ 139 (406)
..+|+||+|+| .|.+|..+.+.|.... .++... +++.. +... +........... .+...++|+||.|+|.
T Consensus 18 ~~~m~~I~iIG-~G~mG~~~A~~l~~~G-~~V~~~-dr~~~--~~~~----l~~~g~~~~~~~-~~~~~~aDvvi~~vp~ 87 (310)
T 3doj_A 18 GSHMMEVGFLG-LGIMGKAMSMNLLKNG-FKVTVW-NRTLS--KCDE----LVEHGASVCESP-AEVIKKCKYTIAMLSD 87 (310)
T ss_dssp CCCSCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEE-CSSGG--GGHH----HHHTTCEECSSH-HHHHHHCSEEEECCSS
T ss_pred cccCCEEEEEC-ccHHHHHHHHHHHHCC-CeEEEE-eCCHH--HHHH----HHHCCCeEcCCH-HHHHHhCCEEEEEcCC
Confidence 34467999999 9999999999998653 355544 43321 1111 000011101111 1223578999999987
Q ss_pred cch-HHHH---h----hCCCCCEEEEcCCc
Q 015441 140 GTT-QEII---K----GLPKSLKIVDLSAD 161 (406)
Q Consensus 140 ~~s-~~~~---~----~l~~G~~VIDlSa~ 161 (406)
... .+.+ . .+..|..|||.|+.
T Consensus 88 ~~~~~~v~~~~~~l~~~l~~g~~vv~~st~ 117 (310)
T 3doj_A 88 PCAALSVVFDKGGVLEQICEGKGYIDMSTV 117 (310)
T ss_dssp HHHHHHHHHSTTCGGGGCCTTCEEEECSCC
T ss_pred HHHHHHHHhCchhhhhccCCCCEEEECCCC
Confidence 533 3333 2 24568899999874
No 120
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=96.62 E-value=0.003 Score=62.01 Aligned_cols=93 Identities=17% Similarity=0.385 Sum_probs=56.1
Q ss_pred ccEEEEECcccHHHHHHHHHHHcC------CCceEEEEeccCcC--Ccccc--ccccCccc-cCCCcccccCcc-cC--C
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANH------PYFGIKLMTADRKA--GQSIG--SVFPHLIS-QDLPTMVAVKDA-DF--S 128 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~h------p~~elv~l~s~~~~--G~~i~--~v~p~l~~-~~~~~~~~~~~~-~~--~ 128 (406)
++||+|+| .|.||+.++++|.++ +.++++++++++.. ...++ ........ ..++.. ..+.+ .+ .
T Consensus 4 ~irVgIiG-~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~-~~d~~e~l~~~ 81 (325)
T 3ing_A 4 EIRIILMG-TGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDR-AFSGPEDLMGE 81 (325)
T ss_dssp EEEEEEEC-CSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSS-BCCSGGGGTTS
T ss_pred eEEEEEEc-CcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcc-cCCHHHHhcCC
Confidence 58999999 999999999999875 78999999976532 11010 00000000 001100 00111 11 3
Q ss_pred CCCEEEEcCCCcch----HHHHh-hCCCCCEEEE
Q 015441 129 NVDAVFCCLPHGTT----QEIIK-GLPKSLKIVD 157 (406)
Q Consensus 129 ~vDvVF~al~~~~s----~~~~~-~l~~G~~VID 157 (406)
++|+|+.|+|+... .++.. ++++|+.||-
T Consensus 82 ~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVt 115 (325)
T 3ing_A 82 AADLLVDCTPASRDGVREYSLYRMAFESGMNVVT 115 (325)
T ss_dssp CCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEECCCCccccchHHHHHHHHHHCCCeEEE
Confidence 68999999987422 35454 5689999884
No 121
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=96.62 E-value=0.0047 Score=59.33 Aligned_cols=78 Identities=22% Similarity=0.341 Sum_probs=54.0
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
|+.||+|+|++|.+|+.+.+.|.... .++..+ +++.. .+ . .+...++|+||+|+|...
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G-~~V~~~-~~~~~-------------~~---~----~~~~~~aDvVilavp~~~ 77 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASG-YPISIL-DREDW-------------AV---A----ESILANADVVIVSVPINL 77 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTT-CCEEEE-CTTCG-------------GG---H----HHHHTTCSEEEECSCGGG
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCC-CeEEEE-ECCcc-------------cC---H----HHHhcCCCEEEEeCCHHH
Confidence 45689999999999999999998643 355443 32210 00 0 122357899999999888
Q ss_pred hHHHHhh----CCCCCEEEEcCCc
Q 015441 142 TQEIIKG----LPKSLKIVDLSAD 161 (406)
Q Consensus 142 s~~~~~~----l~~G~~VIDlSa~ 161 (406)
..+.++. +..++.|+|.++-
T Consensus 78 ~~~vl~~l~~~l~~~~iv~~~~sv 101 (298)
T 2pv7_A 78 TLETIERLKPYLTENMLLADLTSV 101 (298)
T ss_dssp HHHHHHHHGGGCCTTSEEEECCSC
T ss_pred HHHHHHHHHhhcCCCcEEEECCCC
Confidence 7766643 3567899998763
No 122
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.61 E-value=0.0074 Score=57.16 Aligned_cols=81 Identities=17% Similarity=0.194 Sum_probs=56.8
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
.-+||+|+| +|.+|+.+++. + .+|++.+.. ..+| + + + .....++++ .+.+.|+|+.|.++..
T Consensus 11 ~~~rV~i~G-~GaIG~~v~~~---~-~leLv~v~~-~k~g----e----l-g--v~a~~d~d~-lla~pD~VVe~A~~~a 72 (253)
T 1j5p_A 11 HHMTVLIIG-MGNIGKKLVEL---G-NFEKIYAYD-RISK----D----I-P--GVVRLDEFQ-VPSDVSTVVECASPEA 72 (253)
T ss_dssp CCCEEEEEC-CSHHHHHHHHH---S-CCSEEEEEC-SSCC----C----C-S--SSEECSSCC-CCTTCCEEEECSCHHH
T ss_pred ccceEEEEC-cCHHHHHHHhc---C-CcEEEEEEe-cccc----c----c-C--ceeeCCHHH-HhhCCCEEEECCCHHH
Confidence 347999999 99999999998 5 899999887 3333 1 1 1 111222221 2257899999999887
Q ss_pred hHHHHh-hCCCCCEEEEcCC
Q 015441 142 TQEIIK-GLPKSLKIVDLSA 160 (406)
Q Consensus 142 s~~~~~-~l~~G~~VIDlSa 160 (406)
-.++.. .|++|+.||-.|.
T Consensus 73 v~e~~~~iL~aG~dvv~~S~ 92 (253)
T 1j5p_A 73 VKEYSLQILKNPVNYIIIST 92 (253)
T ss_dssp HHHHHHHHTTSSSEEEECCG
T ss_pred HHHHHHHHHHCCCCEEEcCh
Confidence 777554 5799998886664
No 123
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=96.60 E-value=0.0022 Score=61.56 Aligned_cols=89 Identities=16% Similarity=0.208 Sum_probs=52.4
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccCCCCCEEEEcCCC
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~ 139 (406)
.|++||+|+| .|++|+.+.+.|.++. .++..+ +++.. -+.+.. ..+....+. .+... +|+||.|+|.
T Consensus 13 ~~~~~I~vIG-~G~mG~~~A~~l~~~G-~~V~~~-dr~~~~~~~~~~-------~g~~~~~~~-~~~~~-aDvvi~~vp~ 80 (296)
T 3qha_A 13 TEQLKLGYIG-LGNMGAPMATRMTEWP-GGVTVY-DIRIEAMTPLAE-------AGATLADSV-ADVAA-ADLIHITVLD 80 (296)
T ss_dssp --CCCEEEEC-CSTTHHHHHHHHTTST-TCEEEE-CSSTTTSHHHHH-------TTCEECSSH-HHHTT-SSEEEECCSS
T ss_pred cCCCeEEEEC-cCHHHHHHHHHHHHCC-CeEEEE-eCCHHHHHHHHH-------CCCEEcCCH-HHHHh-CCEEEEECCC
Confidence 3456899999 9999999999998753 455544 33221 111111 011111111 12235 9999999996
Q ss_pred cch-HHHH----hhCCCCCEEEEcCCc
Q 015441 140 GTT-QEII----KGLPKSLKIVDLSAD 161 (406)
Q Consensus 140 ~~s-~~~~----~~l~~G~~VIDlSa~ 161 (406)
... .+.+ +.+..|..|||.|..
T Consensus 81 ~~~~~~v~~~l~~~l~~g~ivv~~st~ 107 (296)
T 3qha_A 81 DAQVREVVGELAGHAKPGTVIAIHSTI 107 (296)
T ss_dssp HHHHHHHHHHHHTTCCTTCEEEECSCC
T ss_pred hHHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 533 3333 334578899999875
No 124
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=96.59 E-value=0.0014 Score=59.80 Aligned_cols=34 Identities=26% Similarity=0.267 Sum_probs=28.7
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCC-CceEEEEe
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHP-YFGIKLMT 95 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp-~~elv~l~ 95 (406)
++++|.|.||||++|+.|++.|.+.+ ..+++.+.
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~ 37 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLV 37 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEE
Confidence 35689999999999999999998775 57777765
No 125
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=96.55 E-value=0.0053 Score=55.96 Aligned_cols=32 Identities=28% Similarity=0.476 Sum_probs=26.4
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCc-eEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYF-GIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~-elv~l~ 95 (406)
++|.|.||||++|+.+++.|++.... +++.+.
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~ 51 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIG 51 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEE
Confidence 57999999999999999999876543 666664
No 126
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=96.49 E-value=0.0027 Score=61.12 Aligned_cols=33 Identities=21% Similarity=0.454 Sum_probs=27.4
Q ss_pred ccEEEEECcccHHHHHHHHHHHcC-CCceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANH-PYFGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~h-p~~elv~l~ 95 (406)
|++|.|.||||++|+.|++.|.+. +..+++.+.
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~ 37 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLD 37 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEe
Confidence 468999999999999999988864 356777765
No 127
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=96.48 E-value=0.0045 Score=60.88 Aligned_cols=33 Identities=21% Similarity=0.398 Sum_probs=27.5
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
+|++|.|.||||++|+.|++.|.+.. .+++.+.
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 60 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEG-HYVIASD 60 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCC-CeEEEEE
Confidence 45789999999999999999998654 5777665
No 128
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=96.47 E-value=0.0046 Score=60.12 Aligned_cols=92 Identities=18% Similarity=0.161 Sum_probs=55.1
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCC-ceEEEEeccCcCCccccccccCccccCCCcccccCcc-cCCCCCEEEEcCCCc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPY-FGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDA-DFSNVDAVFCCLPHG 140 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~-~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~-~~~~vDvVF~al~~~ 140 (406)
++||+||| .|.+|+.+.+.|..... .++..+ +++.. .+.... .+ +......... .+ ...++|+||+|+|..
T Consensus 33 ~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~-dr~~~--~~~~a~-~~-G~~~~~~~~~-~~~~~~~aDvVilavp~~ 105 (314)
T 3ggo_A 33 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGY-DINPE--SISKAV-DL-GIIDEGTTSI-AKVEDFSPDFVMLSSPVR 105 (314)
T ss_dssp CSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEE-CSCHH--HHHHHH-HT-TSCSEEESCT-TGGGGGCCSEEEECSCGG
T ss_pred CCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEE-ECCHH--HHHHHH-HC-CCcchhcCCH-HHHhhccCCEEEEeCCHH
Confidence 46899999 99999999999885432 255444 43321 111100 00 1000001111 22 346899999999988
Q ss_pred chHHHHh----hCCCCCEEEEcCCc
Q 015441 141 TTQEIIK----GLPKSLKIVDLSAD 161 (406)
Q Consensus 141 ~s~~~~~----~l~~G~~VIDlSa~ 161 (406)
...+.++ .+..++.|+|.++.
T Consensus 106 ~~~~vl~~l~~~l~~~~iv~d~~Sv 130 (314)
T 3ggo_A 106 TFREIAKKLSYILSEDATVTDQGSV 130 (314)
T ss_dssp GHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred HHHHHHHHHhhccCCCcEEEECCCC
Confidence 7666543 35678999998875
No 129
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=96.46 E-value=0.00075 Score=60.98 Aligned_cols=96 Identities=15% Similarity=0.202 Sum_probs=56.4
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc-CCcccccccc-CccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK-AGQSIGSVFP-HLISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~-~G~~i~~v~p-~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
+||+|+||+|.+|+.+++.|.++. .++..+. ++. .-+.+...+. .+...++. .... .+.+.++|+||.|++...
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g-~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~D~Vi~~~~~~~ 76 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG-HEIVVGS-RREEKAEAKAAEYRRIAGDASIT-GMKN-EDAAEACDIAVLTIPWEH 76 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-CEEEEEE-SSHHHHHHHHHHHHHHHSSCCEE-EEEH-HHHHHHCSEEEECSCHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC-CEEEEEe-CCHHHHHHHHHHhccccccCCCC-hhhH-HHHHhcCCEEEEeCChhh
Confidence 379999999999999999998754 4665553 321 1111111000 00000111 1111 122357899999999777
Q ss_pred hHHHHhhCC---CCCEEEEcCCccc
Q 015441 142 TQEIIKGLP---KSLKIVDLSADFR 163 (406)
Q Consensus 142 s~~~~~~l~---~G~~VIDlSa~fR 163 (406)
..+..+.+. .+..|||+++.+.
T Consensus 77 ~~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 77 AIDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp HHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 666554431 4789999998664
No 130
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.46 E-value=0.0029 Score=59.19 Aligned_cols=90 Identities=13% Similarity=0.090 Sum_probs=51.2
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCc--cccCCCcccccCcccCCCCCEEEEcCCC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHL--ISQDLPTMVAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l--~~~~~~~~~~~~~~~~~~vDvVF~al~~ 139 (406)
||+||.|.|| |++|+.|++.|.+.. .+++.+..+......+.. +.+ ...|+. +++ +.++|+||.|++.
T Consensus 4 m~~~ilVtGa-G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~--~~~~~~~~D~~---d~~---~~~~d~vi~~a~~ 73 (286)
T 3ius_A 4 MTGTLLSFGH-GYTARVLSRALAPQG-WRIIGTSRNPDQMEAIRA--SGAEPLLWPGE---EPS---LDGVTHLLISTAP 73 (286)
T ss_dssp -CCEEEEETC-CHHHHHHHHHHGGGT-CEEEEEESCGGGHHHHHH--TTEEEEESSSS---CCC---CTTCCEEEECCCC
T ss_pred CcCcEEEECC-cHHHHHHHHHHHHCC-CEEEEEEcChhhhhhHhh--CCCeEEEeccc---ccc---cCCCCEEEECCCc
Confidence 5679999998 999999999998763 577777532211111100 000 011221 121 6789999999875
Q ss_pred cch-----HHHHhhC-C--CC-CEEEEcCCc
Q 015441 140 GTT-----QEIIKGL-P--KS-LKIVDLSAD 161 (406)
Q Consensus 140 ~~s-----~~~~~~l-~--~G-~~VIDlSa~ 161 (406)
... ..++.++ + .+ .++|-.|+.
T Consensus 74 ~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~ 104 (286)
T 3ius_A 74 DSGGDPVLAALGDQIAARAAQFRWVGYLSTT 104 (286)
T ss_dssp BTTBCHHHHHHHHHHHHTGGGCSEEEEEEEG
T ss_pred cccccHHHHHHHHHHHhhcCCceEEEEeecc
Confidence 322 3333433 2 34 467767764
No 131
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=96.45 E-value=0.0033 Score=64.30 Aligned_cols=85 Identities=15% Similarity=0.250 Sum_probs=56.4
Q ss_pred ccEEEEECcccHHHHHHHHHHHcC---------CCceEEEEeccCcCCccccccccCccccCCCcccccCcccC--CCCC
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANH---------PYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADF--SNVD 131 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~h---------p~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vD 131 (406)
++||+|+| +|.+|+.++++|.+| +.++++++++++.. + .....+ + .....++ .+.+ .++|
T Consensus 10 ~irIgIIG-~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~-~-~~~~~~---~--~~~~~d~-~ell~d~diD 80 (444)
T 3mtj_A 10 PIHVGLLG-LGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLD-K-AEALAG---G--LPLTTNP-FDVVDDPEID 80 (444)
T ss_dssp CEEEEEEC-CHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHH-H-HHHHHT---T--CCEESCT-HHHHTCTTCC
T ss_pred cccEEEEC-CCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHH-H-hhhhcc---c--CcccCCH-HHHhcCCCCC
Confidence 48999999 999999999988743 78999999876431 1 011000 0 0001111 1111 3689
Q ss_pred EEEEcCCC-cchHHHHh-hCCCCCEEE
Q 015441 132 AVFCCLPH-GTTQEIIK-GLPKSLKIV 156 (406)
Q Consensus 132 vVF~al~~-~~s~~~~~-~l~~G~~VI 156 (406)
+|+.|+|+ ....+++. ++++|+.|+
T Consensus 81 vVve~tp~~~~h~~~~~~AL~aGKhVv 107 (444)
T 3mtj_A 81 IVVELIGGLEPARELVMQAIANGKHVV 107 (444)
T ss_dssp EEEECCCSSTTHHHHHHHHHHTTCEEE
T ss_pred EEEEcCCCchHHHHHHHHHHHcCCEEE
Confidence 99999996 67777775 568999888
No 132
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=96.45 E-value=0.0011 Score=66.12 Aligned_cols=92 Identities=18% Similarity=0.264 Sum_probs=55.7
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
..||+|+| +|.+|+.+++.|.++ .++ .+++++.. -+.+....... ..+......+ .+.+.++|+|+.|+|...
T Consensus 16 ~~~v~IiG-aG~iG~~ia~~L~~~--~~V-~V~~R~~~~a~~la~~~~~~-~~d~~~~~~l-~~ll~~~DvVIn~~P~~~ 89 (365)
T 2z2v_A 16 HMKVLILG-AGNIGRAIAWDLKDE--FDV-YIGDVNNENLEKVKEFATPL-KVDASNFDKL-VEVMKEFELVIGALPGFL 89 (365)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHTTT--SEE-EEEESCHHHHHHHTTTSEEE-ECCTTCHHHH-HHHHTTCSCEEECCCHHH
T ss_pred CCeEEEEc-CCHHHHHHHHHHHcC--CeE-EEEECCHHHHHHHHhhCCeE-EEecCCHHHH-HHHHhCCCEEEECCChhh
Confidence 46899999 599999999999877 555 45554321 01111100000 0011111111 122468999999999776
Q ss_pred hHHHHhh-CCCCCEEEEcCC
Q 015441 142 TQEIIKG-LPKSLKIVDLSA 160 (406)
Q Consensus 142 s~~~~~~-l~~G~~VIDlSa 160 (406)
..+++.+ +++|+.+||+|.
T Consensus 90 ~~~v~~a~l~~G~~~vD~s~ 109 (365)
T 2z2v_A 90 GFKSIKAAIKSKVDMVDVSF 109 (365)
T ss_dssp HHHHHHHHHHTTCCEEECCC
T ss_pred hHHHHHHHHHhCCeEEEccC
Confidence 6666655 578999999885
No 133
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.45 E-value=0.0036 Score=57.09 Aligned_cols=31 Identities=23% Similarity=0.282 Sum_probs=26.4
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
++|.|.||||++|+.|++.|++.. .+++.+.
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G-~~V~~~~ 52 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKG-HEPVAMV 52 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CeEEEECCCChHHHHHHHHHHhCC-CeEEEEE
Confidence 589999999999999999998764 5776665
No 134
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=96.40 E-value=0.002 Score=60.35 Aligned_cols=33 Identities=21% Similarity=0.329 Sum_probs=26.7
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
|++||.|.||||++|+.|++.|.+.. .+++.+.
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~ 36 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPEE-YDIYPFD 36 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTTT-EEEEEEC
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhCC-CEEEEec
Confidence 44599999999999999999998763 5776664
No 135
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=96.38 E-value=0.0039 Score=59.27 Aligned_cols=32 Identities=22% Similarity=0.406 Sum_probs=25.1
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEec
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTA 96 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s 96 (406)
|++|.|.||||++|+.|++.|.+.. +++.+..
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~~ 32 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN--EIVVIDN 32 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS--CEEEECC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC--CEEEEEc
Confidence 4589999999999999999998765 5555543
No 136
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.38 E-value=0.0058 Score=58.66 Aligned_cols=89 Identities=10% Similarity=0.066 Sum_probs=53.3
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCc-ccccCcccCCCCCEEEEcCCC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPT-MVAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~-~~~~~~~~~~~vDvVF~al~~ 139 (406)
+++||+|+| .|.+|..+.+.|.+.. .++... +++.. -+.+.. ..... .... .+...++|+||+|+|.
T Consensus 6 ~~~~I~iIG-~G~mG~~~a~~l~~~G-~~V~~~-dr~~~~~~~~~~-------~g~~~~~~~~-~e~~~~aDvvi~~vp~ 74 (303)
T 3g0o_A 6 TDFHVGIVG-LGSMGMGAARSCLRAG-LSTWGA-DLNPQACANLLA-------EGACGAAASA-REFAGVVDALVILVVN 74 (303)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEE-CSCHHHHHHHHH-------TTCSEEESSS-TTTTTTCSEEEECCSS
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCC-CeEEEE-ECCHHHHHHHHH-------cCCccccCCH-HHHHhcCCEEEEECCC
Confidence 457999999 9999999999998653 355544 33221 011111 01111 1111 2334689999999998
Q ss_pred cch-HHHH---h----hCCCCCEEEEcCCc
Q 015441 140 GTT-QEII---K----GLPKSLKIVDLSAD 161 (406)
Q Consensus 140 ~~s-~~~~---~----~l~~G~~VIDlSa~ 161 (406)
... .+.. + .+..|..|||.|+.
T Consensus 75 ~~~~~~v~~~~~~l~~~l~~g~ivv~~st~ 104 (303)
T 3g0o_A 75 AAQVRQVLFGEDGVAHLMKPGSAVMVSSTI 104 (303)
T ss_dssp HHHHHHHHC--CCCGGGSCTTCEEEECSCC
T ss_pred HHHHHHHHhChhhHHhhCCCCCEEEecCCC
Confidence 643 3332 2 24568899999874
No 137
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=96.37 E-value=0.0028 Score=58.63 Aligned_cols=93 Identities=17% Similarity=0.258 Sum_probs=54.1
Q ss_pred CccEEEEECcccHHHHHHHHH-HHcCCCceEEEEeccC--cCCccccccccCccccCCCcccccCcccCCCCCEEEEcCC
Q 015441 62 KQVRIGLLGASGYTGAEIVRL-LANHPYFGIKLMTADR--KAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLP 138 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrl-L~~hp~~elv~l~s~~--~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~ 138 (406)
+..||+|+| .|.+|+.+++. +..++.++++++.++. ..|+.+..+ |-+ . ..++ ++.+.+.|+|+.|+|
T Consensus 84 ~~~rV~IIG-AG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv-~V~---~---~~dl-~eli~~~D~ViIAvP 154 (215)
T 2vt3_A 84 EMTDVILIG-VGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGV-PVY---N---LDDL-EQHVKDESVAILTVP 154 (215)
T ss_dssp ---CEEEEC-CSHHHHHHHHCC------CCEEEEEESCTTTTTCEETTE-EEE---E---GGGH-HHHCSSCCEEEECSC
T ss_pred CCCEEEEEc-cCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCC-eee---c---hhhH-HHHHHhCCEEEEecC
Confidence 346899999 89999999994 3356778999998754 344433321 100 0 1111 111222299999999
Q ss_pred CcchHHHHhhC-CCCCEEEEcCCccc
Q 015441 139 HGTTQEIIKGL-PKSLKIVDLSADFR 163 (406)
Q Consensus 139 ~~~s~~~~~~l-~~G~~VIDlSa~fR 163 (406)
+...++++..+ ++|++.|=+-.+.+
T Consensus 155 s~~~~ei~~~l~~aGi~~Ilnf~P~~ 180 (215)
T 2vt3_A 155 AVAAQSITDRLVALGIKGILNFTPAR 180 (215)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred chhHHHHHHHHHHcCCCEEEEcCcee
Confidence 98888888775 78988553334333
No 138
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.35 E-value=0.0043 Score=60.84 Aligned_cols=87 Identities=17% Similarity=0.186 Sum_probs=54.9
Q ss_pred ccEEEEECcccHHHHHHHHHHH-------cCCCceEEEEeccCcCC-ccccccccCccccCCCcccccCcccC--CCCCE
Q 015441 63 QVRIGLLGASGYTGAEIVRLLA-------NHPYFGIKLMTADRKAG-QSIGSVFPHLISQDLPTMVAVKDADF--SNVDA 132 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~-------~hp~~elv~l~s~~~~G-~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDv 132 (406)
++|||||| +|++|+.-++.+. +.|.++|++++++...- +.+..-++ . . ..+.+. ++.+ .++|+
T Consensus 25 kirvgiIG-~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g---~-~-~~y~d~-~ell~~~~iDa 97 (393)
T 4fb5_A 25 PLGIGLIG-TGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFG---F-E-KATADW-RALIADPEVDV 97 (393)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHT---C-S-EEESCH-HHHHHCTTCCE
T ss_pred CccEEEEc-CCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhC---C-C-eecCCH-HHHhcCCCCcE
Confidence 38999999 8999997766553 46789999999864321 22221111 0 0 001111 1111 47899
Q ss_pred EEEcCCCcchHHHHhh-CCCCCEEE
Q 015441 133 VFCCLPHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 133 VF~al~~~~s~~~~~~-l~~G~~VI 156 (406)
|+.|+|+..=.+++.+ +++|+.|+
T Consensus 98 V~IatP~~~H~~~a~~al~aGkhVl 122 (393)
T 4fb5_A 98 VSVTTPNQFHAEMAIAALEAGKHVW 122 (393)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCEEE
T ss_pred EEECCChHHHHHHHHHHHhcCCeEE
Confidence 9999998877777754 68999876
No 139
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=96.34 E-value=0.0044 Score=58.63 Aligned_cols=61 Identities=16% Similarity=0.347 Sum_probs=39.6
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~ 139 (406)
|||.|.||||+||+.|++.|.+.- .+++.+. |+. +.. . +. ....+...+.++|.|+.+.+.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G-~~V~~l~-R~~-~~~--~----~~------~~~~~~~~l~~~d~vihla~~ 61 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG-HEVTLVS-RKP-GPG--R----IT------WDELAASGLPSCDAAVNLAGE 61 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE-SSC-CTT--E----EE------HHHHHHHCCCSCSEEEECCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEE-CCC-CcC--e----ee------cchhhHhhccCCCEEEEeccC
Confidence 589999999999999999998643 4777775 321 110 0 00 111223345788999987753
No 140
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=96.30 E-value=0.0096 Score=57.33 Aligned_cols=32 Identities=19% Similarity=0.414 Sum_probs=26.7
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
+++|.|.||||++|+.|++.|.+.. .+++.+.
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 58 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMMDG-HEVTVVD 58 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCEEEEEcCccHHHHHHHHHHHHCC-CEEEEEe
Confidence 4689999999999999999998653 5776664
No 141
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=96.29 E-value=0.0024 Score=60.39 Aligned_cols=33 Identities=21% Similarity=0.469 Sum_probs=27.8
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
+++|.|.||||++|+.+++.|.+....+++++.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~ 37 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVT 37 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEE
Confidence 468999999999999999999876546777775
No 142
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=96.27 E-value=0.0033 Score=60.58 Aligned_cols=90 Identities=18% Similarity=0.216 Sum_probs=57.9
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCC--CCCEEEEcCCC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFS--NVDAVFCCLPH 139 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~--~vDvVF~al~~ 139 (406)
+.+||+|+||||..|+.+++.|.++ .+++++....+..|+.+. + ++.+..++ +... ++|+++.++|.
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~-g~~~v~~VnP~~~g~~i~-------G--~~vy~sl~-el~~~~~~Dv~Ii~vp~ 74 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTY-GTKIVAGVTPGKGGMEVL-------G--VPVYDTVK-EAVAHHEVDASIIFVPA 74 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTTCEET-------T--EEEESSHH-HHHHHSCCSEEEECCCH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHc-CCeEEEEECCCCCCceEC-------C--EEeeCCHH-HHhhcCCCCEEEEecCH
Confidence 4579999999999999999988876 567665544443333211 1 11111111 1112 68999999999
Q ss_pred cchHHHHhhC-CCCCE-EEEcCCcc
Q 015441 140 GTTQEIIKGL-PKSLK-IVDLSADF 162 (406)
Q Consensus 140 ~~s~~~~~~l-~~G~~-VIDlSa~f 162 (406)
....+.+..+ ++|++ +|=.+.-|
T Consensus 75 ~~~~~~~~ea~~~Gi~~vVi~t~G~ 99 (288)
T 1oi7_A 75 PAAADAALEAAHAGIPLIVLITEGI 99 (288)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSCC
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCC
Confidence 9888888764 77775 44355545
No 143
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=96.27 E-value=0.0034 Score=59.50 Aligned_cols=89 Identities=17% Similarity=0.267 Sum_probs=52.2
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
+|+||+|+| .|.+|+.+.+.|.... .++..+ ++...-+.+.. ..+...... .+.+.++|+||+|+|...
T Consensus 2 ~~m~i~iiG-~G~~G~~~a~~l~~~g-~~V~~~-~~~~~~~~~~~-------~g~~~~~~~-~~~~~~~D~vi~~vp~~~ 70 (295)
T 1yb4_A 2 NAMKLGFIG-LGIMGSPMAINLARAG-HQLHVT-TIGPVADELLS-------LGAVNVETA-RQVTEFADIIFIMVPDTP 70 (295)
T ss_dssp --CEEEECC-CSTTHHHHHHHHHHTT-CEEEEC-CSSCCCHHHHT-------TTCBCCSSH-HHHHHTCSEEEECCSSHH
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHhCC-CEEEEE-cCHHHHHHHHH-------cCCcccCCH-HHHHhcCCEEEEECCCHH
Confidence 346999999 8999999999998653 466544 32211111111 011111111 122357899999998776
Q ss_pred h-HHHHh---h----CCCCCEEEEcCCc
Q 015441 142 T-QEIIK---G----LPKSLKIVDLSAD 161 (406)
Q Consensus 142 s-~~~~~---~----l~~G~~VIDlSa~ 161 (406)
. .+... . +..|..|||.++.
T Consensus 71 ~~~~v~~~~~~l~~~l~~~~~vv~~s~~ 98 (295)
T 1yb4_A 71 QVEDVLFGEHGCAKTSLQGKTIVDMSSI 98 (295)
T ss_dssp HHHHHHHSTTSSTTSCCTTEEEEECSCC
T ss_pred HHHHHHhCchhHhhcCCCCCEEEECCCC
Confidence 3 44443 2 3457889998875
No 144
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.27 E-value=0.0032 Score=64.36 Aligned_cols=94 Identities=18% Similarity=0.222 Sum_probs=57.9
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCC-ccc-ccccc-Cccc---------------cCCCccccc
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAG-QSI-GSVFP-HLIS---------------QDLPTMVAV 122 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G-~~i-~~v~p-~l~~---------------~~~~~~~~~ 122 (406)
.+++||||+| .|.+|+.+++.+.+.|.++++++++++... +.. ...|. .+.. .......+.
T Consensus 21 ~k~IRVGIIG-aG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~ 99 (446)
T 3upl_A 21 GKPIRIGLIG-AGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDN 99 (446)
T ss_dssp TCCEEEEEEC-CSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCH
T ss_pred CCceEEEEEC-ChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCH
Confidence 4468999999 599999999999999999999999864311 000 00000 0000 000011111
Q ss_pred CcccC--CCCCEEEEcCCCc-chHHHHh-hCCCCCEEE
Q 015441 123 KDADF--SNVDAVFCCLPHG-TTQEIIK-GLPKSLKIV 156 (406)
Q Consensus 123 ~~~~~--~~vDvVF~al~~~-~s~~~~~-~l~~G~~VI 156 (406)
++.+ .++|+|+.|+|+. ...+++. ++++|+.|+
T Consensus 100 -eeLL~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv 136 (446)
T 3upl_A 100 -DLILSNPLIDVIIDATGIPEVGAETGIAAIRNGKHLV 136 (446)
T ss_dssp -HHHHTCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEE
T ss_pred -HHHhcCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEE
Confidence 1112 3699999999874 3455554 568999888
No 145
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=96.25 E-value=0.0052 Score=63.42 Aligned_cols=98 Identities=24% Similarity=0.289 Sum_probs=58.0
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCc-eEEEEeccCc-CCcccccc----------ccCcc--------ccCCCcccc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYF-GIKLMTADRK-AGQSIGSV----------FPHLI--------SQDLPTMVA 121 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~-elv~l~s~~~-~G~~i~~v----------~p~l~--------~~~~~~~~~ 121 (406)
+++||+|+| .|++|..+...|++.|.. +++.+.-+.. ...++... .|.+. ...+. . .
T Consensus 17 ~~mkIaVIG-lG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~-~-t 93 (478)
T 3g79_A 17 PIKKIGVLG-MGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFE-C-T 93 (478)
T ss_dssp SCCEEEEEC-CSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEE-E-E
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeE-E-e
Confidence 346999999 999999999999987555 7766642222 01111111 11110 00010 1 1
Q ss_pred cCcccCCCCCEEEEcCCCcc----------------hHHHHhhCCCCCEEEEcCCcc
Q 015441 122 VKDADFSNVDAVFCCLPHGT----------------TQEIIKGLPKSLKIVDLSADF 162 (406)
Q Consensus 122 ~~~~~~~~vDvVF~al~~~~----------------s~~~~~~l~~G~~VIDlSa~f 162 (406)
.+.+...++|+||.|.|... ...+.+.+..|..|||.|.-.
T Consensus 94 td~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~ 150 (478)
T 3g79_A 94 PDFSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTIT 150 (478)
T ss_dssp SCGGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred CcHHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCC
Confidence 22334568999999998753 122334466788999988653
No 146
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=96.24 E-value=0.0026 Score=59.46 Aligned_cols=96 Identities=14% Similarity=0.182 Sum_probs=52.3
Q ss_pred EEEEECcccHHHHHHHHHHHcC-CCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch-
Q 015441 65 RIGLLGASGYTGAEIVRLLANH-PYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT- 142 (406)
Q Consensus 65 kVaIvGATG~vG~eLlrlL~~h-p~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s- 142 (406)
+|.|.||||++|+.|++.|.+. +..+++.+..+......+....-.+...|+.....+ ...+.++|+||.+++....
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l-~~~~~~~d~vi~~a~~~~~~ 80 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESL-QKAFAGVSKLLFISGPHYDN 80 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHH-HHHTTTCSEEEECCCCCSCH
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHH-HHHHhcCCEEEEcCCCCcCc
Confidence 6999999999999999999875 567887776322211111000000001122111111 1234689999998875321
Q ss_pred -------HHHHhhC-CCCC-EEEEcCCc
Q 015441 143 -------QEIIKGL-PKSL-KIVDLSAD 161 (406)
Q Consensus 143 -------~~~~~~l-~~G~-~VIDlSa~ 161 (406)
..+++++ +.|+ ++|-.|+.
T Consensus 81 ~~n~~~~~~l~~a~~~~~~~~~v~~Ss~ 108 (287)
T 2jl1_A 81 TLLIVQHANVVKAARDAGVKHIAYTGYA 108 (287)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred hHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 2233333 3454 67766654
No 147
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=96.23 E-value=0.0021 Score=60.75 Aligned_cols=32 Identities=28% Similarity=0.455 Sum_probs=26.3
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
|++|.|.||||++|+.+++.|++.. .+++.+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~ 35 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLG-HPTFLLV 35 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEE
Confidence 4689999999999999999998764 4666554
No 148
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=96.22 E-value=0.0071 Score=53.84 Aligned_cols=34 Identities=24% Similarity=0.399 Sum_probs=27.9
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCc-eEEEEe
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYF-GIKLMT 95 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~-elv~l~ 95 (406)
|+++|.|.||||++|+.+++.|.+.... +++.+.
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~ 38 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPA 38 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCB
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEe
Confidence 4568999999999999999999987653 666554
No 149
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=96.22 E-value=0.0036 Score=59.35 Aligned_cols=91 Identities=15% Similarity=0.101 Sum_probs=53.8
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCC-CceEEEEeccCcC-CccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHP-YFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG 140 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp-~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~ 140 (406)
++||+|+| .|.+|+.+.+.|..+. ..++... +++.. -+.+.. . +.......+. .+.+.++|+||+|+|..
T Consensus 6 ~~~I~iIG-~G~mG~~~a~~l~~~g~~~~V~~~-d~~~~~~~~~~~----~-g~~~~~~~~~-~~~~~~aDvVilavp~~ 77 (290)
T 3b1f_A 6 EKTIYIAG-LGLIGASLALGIKRDHPHYKIVGY-NRSDRSRDIALE----R-GIVDEATADF-KVFAALADVIILAVPIK 77 (290)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEE-CSSHHHHHHHHH----T-TSCSEEESCT-TTTGGGCSEEEECSCHH
T ss_pred cceEEEEe-eCHHHHHHHHHHHhCCCCcEEEEE-cCCHHHHHHHHH----c-CCcccccCCH-HHhhcCCCEEEEcCCHH
Confidence 46899999 9999999999888542 4565443 33211 011111 0 1000001111 22345789999999987
Q ss_pred chHHHHh----h-CCCCCEEEEcCCc
Q 015441 141 TTQEIIK----G-LPKSLKIVDLSAD 161 (406)
Q Consensus 141 ~s~~~~~----~-l~~G~~VIDlSa~ 161 (406)
...+.++ . +..+..|||.++.
T Consensus 78 ~~~~v~~~l~~~~l~~~~ivi~~~~~ 103 (290)
T 3b1f_A 78 KTIDFIKILADLDLKEDVIITDAGST 103 (290)
T ss_dssp HHHHHHHHHHTSCCCTTCEEECCCSC
T ss_pred HHHHHHHHHHhcCCCCCCEEEECCCC
Confidence 7655553 3 4457889998763
No 150
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=96.21 E-value=0.0029 Score=62.14 Aligned_cols=94 Identities=14% Similarity=0.289 Sum_probs=56.3
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCC-------CceEEEEeccCcC--Ccccc--ccccCccccCCC-ccc-ccCccc--C
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHP-------YFGIKLMTADRKA--GQSIG--SVFPHLISQDLP-TMV-AVKDAD--F 127 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp-------~~elv~l~s~~~~--G~~i~--~v~p~l~~~~~~-~~~-~~~~~~--~ 127 (406)
++||+|+| +|.+|+.+++.|.+++ .++++++++++.. ...+. .....+....++ ... ..+.++ -
T Consensus 6 ~irvgIiG-~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll~ 84 (331)
T 3c8m_A 6 TINLSIFG-LGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEALA 84 (331)
T ss_dssp EEEEEEEC-CSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHHH
T ss_pred EEeEEEEe-cCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHhC
Confidence 48999999 9999999999998766 6899999875431 11010 000000000000 000 001111 1
Q ss_pred CCCCEEEEcCCCc----chHHHHh-hCCCCCEEEE
Q 015441 128 SNVDAVFCCLPHG----TTQEIIK-GLPKSLKIVD 157 (406)
Q Consensus 128 ~~vDvVF~al~~~----~s~~~~~-~l~~G~~VID 157 (406)
.++|+|+.|+|+. ...++.. ++++|+.||-
T Consensus 85 ~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhVvt 119 (331)
T 3c8m_A 85 RDFDIVVDATPASADGKKELAFYKETFENGKDVVT 119 (331)
T ss_dssp SSCSEEEECSCCCSSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEECCCCCCccchHHHHHHHHHHCCCeEEe
Confidence 3789999999985 4555665 5689999883
No 151
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=96.20 E-value=0.0066 Score=58.50 Aligned_cols=33 Identities=12% Similarity=0.184 Sum_probs=27.6
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
++++|.|.||||++|+.|++.|.+.. .+++.+.
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 56 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLN-QVVIGLD 56 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEe
Confidence 45799999999999999999998764 5776665
No 152
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=96.19 E-value=0.0014 Score=64.22 Aligned_cols=87 Identities=17% Similarity=0.273 Sum_probs=55.8
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCC-------ceEEEEeccCcC-CccccccccCccccCCCcccccCcccC--CCCCE
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPY-------FGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADF--SNVDA 132 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~-------~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDv 132 (406)
++|||||| +|.+|+.-++.+..+|. .+++++++++.. .+.+..-++. . ..+.+. ++.+ .++|+
T Consensus 6 klrvgiIG-~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~----~-~~~~d~-~~ll~~~~iDa 78 (390)
T 4h3v_A 6 NLGIGLIG-YAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGW----S-TTETDW-RTLLERDDVQL 78 (390)
T ss_dssp EEEEEEEC-HHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTC----S-EEESCH-HHHTTCTTCSE
T ss_pred cCcEEEEc-CCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCC----C-cccCCH-HHHhcCCCCCE
Confidence 38999999 89999998888876554 489999875431 1111111110 0 001111 1112 36899
Q ss_pred EEEcCCCcchHHHHhh-CCCCCEEE
Q 015441 133 VFCCLPHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 133 VF~al~~~~s~~~~~~-l~~G~~VI 156 (406)
|+.|+|+..=.+++.+ +++|+.|+
T Consensus 79 V~I~tP~~~H~~~~~~al~aGkhVl 103 (390)
T 4h3v_A 79 VDVCTPGDSHAEIAIAALEAGKHVL 103 (390)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCEEE
T ss_pred EEEeCChHHHHHHHHHHHHcCCCce
Confidence 9999998877777754 68998876
No 153
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=96.16 E-value=0.00077 Score=68.54 Aligned_cols=90 Identities=12% Similarity=0.192 Sum_probs=58.3
Q ss_pred ccEEEEECc---ccHHHHHHHHHHHcC-CCceEEEEeccCcC-CccccccccCccccCCCcccccCcccC--CCCCEEEE
Q 015441 63 QVRIGLLGA---SGYTGAEIVRLLANH-PYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFC 135 (406)
Q Consensus 63 ~ikVaIvGA---TG~vG~eLlrlL~~h-p~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~ 135 (406)
++||+|||+ .|.+|+..++.|..+ |.++++++.++... .+.+...++ ......+.++ ++.+ .++|+|+.
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g---~~~~~~~~~~-~~ll~~~~vD~V~i 95 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLK---LSNATAFPTL-ESFASSSTIDMIVI 95 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTT---CTTCEEESSH-HHHHHCSSCSEEEE
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcC---CCcceeeCCH-HHHhcCCCCCEEEE
Confidence 589999997 499999999999998 99999999875431 111211110 0000011111 1112 36899999
Q ss_pred cCCCcchHHHHhh-CCCC------CEEE
Q 015441 136 CLPHGTTQEIIKG-LPKS------LKIV 156 (406)
Q Consensus 136 al~~~~s~~~~~~-l~~G------~~VI 156 (406)
|+|+..-.+++.+ +++| +.|+
T Consensus 96 ~tp~~~H~~~~~~al~aG~~~~~~khVl 123 (438)
T 3btv_A 96 AIQVASHYEVVMPLLEFSKNNPNLKYLF 123 (438)
T ss_dssp CSCHHHHHHHHHHHHHHGGGCTTCCEEE
T ss_pred eCCcHHHHHHHHHHHHCCCCcccceeEE
Confidence 9998877777654 5778 7665
No 154
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=96.14 E-value=0.0049 Score=59.87 Aligned_cols=86 Identities=13% Similarity=0.233 Sum_probs=54.7
Q ss_pred ccEEEEECcccHHHH-HHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccC--CCCCEEEEcCC
Q 015441 63 QVRIGLLGASGYTGA-EIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCCLP 138 (406)
Q Consensus 63 ~ikVaIvGATG~vG~-eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~al~ 138 (406)
++|||||| +|.+|. .+++.|. ++.++++++.++... .+.+...++.. ..+.+. ++.+ .++|+|+.|+|
T Consensus 4 ~~rvgiiG-~G~~~~~~~~~~l~-~~~~~lvav~d~~~~~~~~~a~~~~~~-----~~~~~~-~~ll~~~~~D~V~i~tp 75 (336)
T 2p2s_A 4 KIRFAAIG-LAHNHIYDMCQQLI-DAGAELAGVFESDSDNRAKFTSLFPSV-----PFAASA-EQLITDASIDLIACAVI 75 (336)
T ss_dssp CCEEEEEC-CSSTHHHHHHHHHH-HTTCEEEEEECSCTTSCHHHHHHSTTC-----CBCSCH-HHHHTCTTCCEEEECSC
T ss_pred ccEEEEEC-CChHHHHHhhhhhc-CCCcEEEEEeCCCHHHHHHHHHhcCCC-----cccCCH-HHHhhCCCCCEEEEeCC
Confidence 58999999 688885 6777775 578999999975432 22222222111 111111 1112 36899999999
Q ss_pred CcchHHHHhh-CCCCCEEE
Q 015441 139 HGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 139 ~~~s~~~~~~-l~~G~~VI 156 (406)
+..-.+++.+ +++|+.|+
T Consensus 76 ~~~h~~~~~~al~aGkhVl 94 (336)
T 2p2s_A 76 PCDRAELALRTLDAGKDFF 94 (336)
T ss_dssp GGGHHHHHHHHHHTTCEEE
T ss_pred hhhHHHHHHHHHHCCCcEE
Confidence 8877777764 68898666
No 155
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=96.13 E-value=0.0044 Score=58.69 Aligned_cols=32 Identities=22% Similarity=0.381 Sum_probs=26.6
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
|++|.|.||||++|+.+++.|.+.. .+++.+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~ 35 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLG-HPTYVLF 35 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC-CcEEEEE
Confidence 4689999999999999999998754 5676664
No 156
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.11 E-value=0.0057 Score=62.96 Aligned_cols=98 Identities=12% Similarity=0.134 Sum_probs=61.4
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCc---eEEEEeccCcCCcccccccc-CccccCCC--cccccCcccCCCCCEEE
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYF---GIKLMTADRKAGQSIGSVFP-HLISQDLP--TMVAVKDADFSNVDAVF 134 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~---elv~l~s~~~~G~~i~~v~p-~l~~~~~~--~~~~~~~~~~~~vDvVF 134 (406)
.-+.||.|+| .|-||+.++++|++++++ +++ +++...+++.+....+ .+....+. .+.+.-...+.+.|+|+
T Consensus 11 ~~~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~-vaD~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvVI 88 (480)
T 2ph5_A 11 LFKNRFVILG-FGCVGQALMPLIFEKFDIKPSQVT-IIAAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFLI 88 (480)
T ss_dssp CCCSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEE-EEESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEEE
T ss_pred cCCCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEE-EeccchhhhhHHhhcCCceeEEeccchhHHHHHHHHhcCCCEEE
Confidence 3346899999 999999999999988876 454 4454444433221111 11111111 01010011233459999
Q ss_pred EcCCCcchHHHHhhC-CCCCEEEEcCC
Q 015441 135 CCLPHGTTQEIIKGL-PKSLKIVDLSA 160 (406)
Q Consensus 135 ~al~~~~s~~~~~~l-~~G~~VIDlSa 160 (406)
-+++...+..+++++ ++|+.+||++.
T Consensus 89 N~s~~~~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 89 DVSIGISSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp ECCSSSCHHHHHHHHHHHTCEEEESSC
T ss_pred ECCccccCHHHHHHHHHcCCCEEECCC
Confidence 999888888888764 88999999875
No 157
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=96.10 E-value=0.0087 Score=58.68 Aligned_cols=33 Identities=15% Similarity=0.420 Sum_probs=27.2
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
+++|.|.||||++|+.|++.|.+....+++.+.
T Consensus 32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~ 64 (377)
T 2q1s_A 32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVD 64 (377)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCceEEEEE
Confidence 358999999999999999999876435777764
No 158
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=96.09 E-value=0.0035 Score=60.36 Aligned_cols=36 Identities=19% Similarity=0.393 Sum_probs=27.8
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcC-CCceEEEEec
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANH-PYFGIKLMTA 96 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~h-p~~elv~l~s 96 (406)
.++++|.|.||||++|+.|++.|++. +.++++.+..
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~ 58 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDA 58 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEec
Confidence 34578999999999999999988854 4567766653
No 159
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=96.09 E-value=0.0038 Score=59.55 Aligned_cols=33 Identities=21% Similarity=0.328 Sum_probs=26.9
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
+|++|.|.||||++|+.+++.|++.. .+++.+.
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~ 35 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFS-HPTFIYA 35 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTT-CCEEEEE
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCC-CcEEEEE
Confidence 45689999999999999999998754 5676665
No 160
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=96.09 E-value=0.013 Score=60.51 Aligned_cols=65 Identities=11% Similarity=0.149 Sum_probs=42.2
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCC
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~ 139 (406)
++||.|.||||++|+.|++.|.+.. .+++.+..... .. .. +.. ++. ......+.++|+||.|.+.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G-~~V~~l~R~~~-~~--~~----v~~-d~~---~~~~~~l~~~D~Vih~A~~ 211 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGG-HEVIQLVRKEP-KP--GK----RFW-DPL---NPASDLLDGADVLVHLAGE 211 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESSSC-CT--TC----EEC-CTT---SCCTTTTTTCSEEEECCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCCC-Cc--cc----eee-ccc---chhHHhcCCCCEEEECCCC
Confidence 5799999999999999999998764 47777653222 11 11 111 111 1113345789999998875
No 161
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=96.06 E-value=0.0044 Score=58.01 Aligned_cols=91 Identities=12% Similarity=0.192 Sum_probs=56.0
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCC-ccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAG-QSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G-~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s 142 (406)
+||+|+| .|.+|+.+.+.|.... .+++.+.+++..- +.+...+ .+....+. .+.+.++|+||.|+|....
T Consensus 11 m~i~iiG-~G~mG~~~a~~l~~~g-~~~v~~~~~~~~~~~~~~~~~------g~~~~~~~-~~~~~~~Dvvi~av~~~~~ 81 (266)
T 3d1l_A 11 TPIVLIG-AGNLATNLAKALYRKG-FRIVQVYSRTEESARELAQKV------EAEYTTDL-AEVNPYAKLYIVSLKDSAF 81 (266)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHHHT-CCEEEEECSSHHHHHHHHHHT------TCEEESCG-GGSCSCCSEEEECCCHHHH
T ss_pred CeEEEEc-CCHHHHHHHHHHHHCC-CeEEEEEeCCHHHHHHHHHHc------CCceeCCH-HHHhcCCCEEEEecCHHHH
Confidence 5899999 6999999999988643 4555565543210 1111100 11111111 2234689999999998765
Q ss_pred HHHHhh----CCCCCEEEEcCCccc
Q 015441 143 QEIIKG----LPKSLKIVDLSADFR 163 (406)
Q Consensus 143 ~~~~~~----l~~G~~VIDlSa~fR 163 (406)
.++++. +..|..|||+++...
T Consensus 82 ~~v~~~l~~~~~~~~ivv~~s~~~~ 106 (266)
T 3d1l_A 82 AELLQGIVEGKREEALMVHTAGSIP 106 (266)
T ss_dssp HHHHHHHHTTCCTTCEEEECCTTSC
T ss_pred HHHHHHHHhhcCCCcEEEECCCCCc
Confidence 555543 346889999988654
No 162
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=96.06 E-value=0.0027 Score=65.39 Aligned_cols=86 Identities=12% Similarity=0.195 Sum_probs=55.5
Q ss_pred ccEEEEECcc---cHHHHHHHHHHHcC-CCceEEEEeccCcC-CccccccccCccccCCCcccccCcccC--CCCCEEEE
Q 015441 63 QVRIGLLGAS---GYTGAEIVRLLANH-PYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFC 135 (406)
Q Consensus 63 ~ikVaIvGAT---G~vG~eLlrlL~~h-p~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~ 135 (406)
++||+|||+. |.+|+..++.|..+ |.+++++++++... .+.+...++ ......+.+. ++.+ .++|+|+.
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g---~~~~~~~~d~-~ell~~~~vD~V~I 114 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQ---LKHATGFDSL-ESFAQYKDIDMIVV 114 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTT---CTTCEEESCH-HHHHHCTTCSEEEE
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcC---CCcceeeCCH-HHHhcCCCCCEEEE
Confidence 5899999973 99999999999988 89999999875431 111111110 0000011111 1112 37999999
Q ss_pred cCCCcchHHHHhh-CCCC
Q 015441 136 CLPHGTTQEIIKG-LPKS 152 (406)
Q Consensus 136 al~~~~s~~~~~~-l~~G 152 (406)
|+|+..-.+++.+ +++|
T Consensus 115 ~tp~~~H~~~~~~al~aG 132 (479)
T 2nvw_A 115 SVKVPEHYEVVKNILEHS 132 (479)
T ss_dssp CSCHHHHHHHHHHHHHHS
T ss_pred cCCcHHHHHHHHHHHHCC
Confidence 9998877777754 5778
No 163
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=96.06 E-value=0.0042 Score=59.01 Aligned_cols=87 Identities=14% Similarity=0.273 Sum_probs=52.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc-c
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG-T 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~-~ 141 (406)
+||+|+| .|.+|..+.+.|.++. .++... +++.. -+.+.. ..+...... .+...++|+||.|+|.. .
T Consensus 2 ~~i~iIG-~G~mG~~~a~~l~~~G-~~V~~~-dr~~~~~~~~~~-------~g~~~~~~~-~~~~~~aDvvi~~vp~~~~ 70 (287)
T 3pef_A 2 QKFGFIG-LGIMGSAMAKNLVKAG-CSVTIW-NRSPEKAEELAA-------LGAERAATP-CEVVESCPVTFAMLADPAA 70 (287)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEE-CSSGGGGHHHHH-------TTCEECSSH-HHHHHHCSEEEECCSSHHH
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCC-CeEEEE-cCCHHHHHHHHH-------CCCeecCCH-HHHHhcCCEEEEEcCCHHH
Confidence 5899999 8999999999998654 466544 43321 111111 011101111 12235789999999954 3
Q ss_pred hHHHH-------hhCCCCCEEEEcCCc
Q 015441 142 TQEII-------KGLPKSLKIVDLSAD 161 (406)
Q Consensus 142 s~~~~-------~~l~~G~~VIDlSa~ 161 (406)
..+.. +.+..|..|||.|+.
T Consensus 71 ~~~v~~~~~~l~~~l~~~~~vi~~st~ 97 (287)
T 3pef_A 71 AEEVCFGKHGVLEGIGEGRGYVDMSTV 97 (287)
T ss_dssp HHHHHHSTTCHHHHCCTTCEEEECSCC
T ss_pred HHHHHcCcchHhhcCCCCCEEEeCCCC
Confidence 33433 335678899999874
No 164
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=96.05 E-value=0.0057 Score=58.88 Aligned_cols=71 Identities=20% Similarity=0.165 Sum_probs=41.2
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCC
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~ 139 (406)
.++++|.|.||||++|+.|++.|++.. .+++.+. ++.....+..+ ..|+.....+ ...+.++|+||.|.+.
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~-r~~~~~~~~~~-----~~Dl~d~~~~-~~~~~~~d~vih~A~~ 87 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQG-RTVRGFD-LRPSGTGGEEV-----VGSLEDGQAL-SDAIMGVSAVLHLGAF 87 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTT-CCEEEEE-SSCCSSCCSEE-----ESCTTCHHHH-HHHHTTCSEEEECCCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCC-CEEEEEe-CCCCCCCccEE-----ecCcCCHHHH-HHHHhCCCEEEECCcc
Confidence 345689999999999999999998764 5676664 33222122211 1122211111 1224689999998764
No 165
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=96.05 E-value=0.002 Score=61.27 Aligned_cols=90 Identities=16% Similarity=0.292 Sum_probs=52.1
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG 140 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~ 140 (406)
|++||+|+| .|.+|+.+.+.|..+. .++. +.+++.. -+.+.. ..+...... .+.+.++|+||.|+|..
T Consensus 4 M~m~i~iiG-~G~~G~~~a~~l~~~g-~~V~-~~~~~~~~~~~~~~-------~g~~~~~~~-~~~~~~~D~vi~~v~~~ 72 (299)
T 1vpd_A 4 MTMKVGFIG-LGIMGKPMSKNLLKAG-YSLV-VSDRNPEAIADVIA-------AGAETASTA-KAIAEQCDVIITMLPNS 72 (299)
T ss_dssp --CEEEEEC-CSTTHHHHHHHHHHTT-CEEE-EECSCHHHHHHHHH-------TTCEECSSH-HHHHHHCSEEEECCSSH
T ss_pred ccceEEEEC-chHHHHHHHHHHHhCC-CEEE-EEeCCHHHHHHHHH-------CCCeecCCH-HHHHhCCCEEEEECCCH
Confidence 457999999 8999999999998654 4654 4443211 011111 011101111 12235789999999954
Q ss_pred ch-HHHH-------hhCCCCCEEEEcCCcc
Q 015441 141 TT-QEII-------KGLPKSLKIVDLSADF 162 (406)
Q Consensus 141 ~s-~~~~-------~~l~~G~~VIDlSa~f 162 (406)
.. .... +.+..|..|||.|+..
T Consensus 73 ~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~ 102 (299)
T 1vpd_A 73 PHVKEVALGENGIIEGAKPGTVLIDMSSIA 102 (299)
T ss_dssp HHHHHHHHSTTCHHHHCCTTCEEEECSCCC
T ss_pred HHHHHHHhCcchHhhcCCCCCEEEECCCCC
Confidence 43 3333 3356788999998753
No 166
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=96.05 E-value=0.013 Score=56.48 Aligned_cols=92 Identities=17% Similarity=0.236 Sum_probs=53.3
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG 140 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~ 140 (406)
.|+.||++|| .|..|..+.+.|.++- ++++...-....-+++.. . + ....... .+...++|+||+|++..
T Consensus 3 ~Ms~kIgfIG-LG~MG~~mA~~L~~~G-~~V~v~dr~~~~~~~l~~----~-G--~~~~~s~-~e~~~~~dvvi~~l~~~ 72 (297)
T 4gbj_A 3 AMSEKIAFLG-LGNLGTPIAEILLEAG-YELVVWNRTASKAEPLTK----L-G--ATVVENA-IDAITPGGIVFSVLADD 72 (297)
T ss_dssp -CCCEEEEEC-CSTTHHHHHHHHHHTT-CEEEEC-------CTTTT----T-T--CEECSSG-GGGCCTTCEEEECCSSH
T ss_pred CCCCcEEEEe-cHHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHH----c-C--CeEeCCH-HHHHhcCCceeeeccch
Confidence 3456899999 9999999999888653 455544311111111111 0 1 1111111 22346899999999987
Q ss_pred chHH------HHhhCCCCCEEEEcCCcc
Q 015441 141 TTQE------IIKGLPKSLKIVDLSADF 162 (406)
Q Consensus 141 ~s~~------~~~~l~~G~~VIDlSa~f 162 (406)
...+ ..+.+..|..+||.|...
T Consensus 73 ~~~~~v~~~~~~~~~~~~~iiid~sT~~ 100 (297)
T 4gbj_A 73 AAVEELFSMELVEKLGKDGVHVSMSTIS 100 (297)
T ss_dssp HHHHHHSCHHHHHHHCTTCEEEECSCCC
T ss_pred hhHHHHHHHHHHhhcCCCeEEEECCCCC
Confidence 5533 223346788999998853
No 167
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=96.04 E-value=0.004 Score=59.12 Aligned_cols=33 Identities=15% Similarity=0.205 Sum_probs=27.0
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
|+++|.|.||||++|+.|++.|.+.. .+++.+.
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNN-WHAVGCG 33 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCC-CeEEEEc
Confidence 34689999999999999999998764 5776664
No 168
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.02 E-value=0.0043 Score=60.04 Aligned_cols=32 Identities=16% Similarity=0.238 Sum_probs=27.1
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEec
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTA 96 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s 96 (406)
++|.|.||||++|+.|++.|++.. .+++.+..
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R 42 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAH-RPTYILAR 42 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCC-CCEEEEEC
Confidence 589999999999999999998765 57777653
No 169
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.00 E-value=0.0052 Score=56.61 Aligned_cols=86 Identities=12% Similarity=0.205 Sum_probs=56.7
Q ss_pred CCccEEEEECcccHHHHHHHHHHH-cCCCceEEEEeccC--cCCccccccccCccccCCCcccccCcccC-CCCCEEEEc
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLA-NHPYFGIKLMTADR--KAGQSIGSVFPHLISQDLPTMVAVKDADF-SNVDAVFCC 136 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~-~hp~~elv~l~s~~--~~G~~i~~v~p~l~~~~~~~~~~~~~~~~-~~vDvVF~a 136 (406)
++..||+|+| .|.+|+.+++.+. .. .++++++.+.. ..|+.+..+ |-+ . ..++ ++.+ .++|+|+.|
T Consensus 78 ~~~~rV~IIG-aG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~gv-~V~---~---~~dl-~ell~~~ID~ViIA 147 (211)
T 2dt5_A 78 NRKWGLCIVG-MGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRGG-VIE---H---VDLL-PQRVPGRIEIALLT 147 (211)
T ss_dssp TSCEEEEEEC-CSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETTE-EEE---E---GGGH-HHHSTTTCCEEEEC
T ss_pred CCCCEEEEEC-ccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcCC-eee---c---HHhH-HHHHHcCCCEEEEe
Confidence 3457999999 8999999999643 34 78999998753 334433311 100 0 1111 1111 268999999
Q ss_pred CCCcchHHHHhhC-CCCCEEE
Q 015441 137 LPHGTTQEIIKGL-PKSLKIV 156 (406)
Q Consensus 137 l~~~~s~~~~~~l-~~G~~VI 156 (406)
+|+...++++..+ ++|+++|
T Consensus 148 ~Ps~~~~ei~~~l~~aGi~~I 168 (211)
T 2dt5_A 148 VPREAAQKAADLLVAAGIKGI 168 (211)
T ss_dssp SCHHHHHHHHHHHHHHTCCEE
T ss_pred CCchhHHHHHHHHHHcCCCEE
Confidence 9998777877765 6798866
No 170
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.96 E-value=0.0018 Score=55.10 Aligned_cols=91 Identities=14% Similarity=0.176 Sum_probs=53.4
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCC-ccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAG-QSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G-~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
..+|+|+| +|.+|+.+++.|... ..+ +.+.++...- +.+...+ .. .......+ .+.+.++|+||.|+|...
T Consensus 21 ~~~v~iiG-~G~iG~~~a~~l~~~-g~~-v~v~~r~~~~~~~~a~~~---~~-~~~~~~~~-~~~~~~~Divi~at~~~~ 92 (144)
T 3oj0_A 21 GNKILLVG-NGMLASEIAPYFSYP-QYK-VTVAGRNIDHVRAFAEKY---EY-EYVLINDI-DSLIKNNDVIITATSSKT 92 (144)
T ss_dssp CCEEEEEC-CSHHHHHHGGGCCTT-TCE-EEEEESCHHHHHHHHHHH---TC-EEEECSCH-HHHHHTCSEEEECSCCSS
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhC-CCE-EEEEcCCHHHHHHHHHHh---CC-ceEeecCH-HHHhcCCCEEEEeCCCCC
Confidence 35899999 599999999988774 467 5555543211 1111111 00 10001111 122357999999999764
Q ss_pred hHHHHhhCCCCCEEEEcCCc
Q 015441 142 TQEIIKGLPKSLKIVDLSAD 161 (406)
Q Consensus 142 s~~~~~~l~~G~~VIDlSa~ 161 (406)
..-....+..|..|+|++-+
T Consensus 93 ~~~~~~~l~~g~~vid~~~p 112 (144)
T 3oj0_A 93 PIVEERSLMPGKLFIDLGNP 112 (144)
T ss_dssp CSBCGGGCCTTCEEEECCSS
T ss_pred cEeeHHHcCCCCEEEEccCC
Confidence 32222345678999999765
No 171
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=95.93 E-value=0.0073 Score=56.76 Aligned_cols=29 Identities=31% Similarity=0.354 Sum_probs=25.0
Q ss_pred EEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 65 RIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 65 kVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
||.|.||||++|+.|++.|. . ..+++.+.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-g~~V~~~~ 30 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-VGNLIALD 30 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-TSEEEEEC
T ss_pred eEEEECCCCHHHHHHHHHhh-c-CCeEEEec
Confidence 79999999999999999998 4 56777764
No 172
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=95.92 E-value=0.0061 Score=55.68 Aligned_cols=91 Identities=13% Similarity=0.207 Sum_probs=53.4
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
+++||+|+| +|.+|+.+++.|.... .++..+ +++.. +.... ....+. .... .+.+.++|+||+|++...
T Consensus 27 ~~~~I~iiG-~G~~G~~la~~l~~~g-~~V~~~-~r~~~--~~~~~----~~~g~~-~~~~-~~~~~~~DvVi~av~~~~ 95 (215)
T 2vns_A 27 EAPKVGILG-SGDFARSLATRLVGSG-FKVVVG-SRNPK--RTARL----FPSAAQ-VTFQ-EEAVSSPEVIFVAVFREH 95 (215)
T ss_dssp --CCEEEEC-CSHHHHHHHHHHHHTT-CCEEEE-ESSHH--HHHHH----SBTTSE-EEEH-HHHTTSCSEEEECSCGGG
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCC-CEEEEE-eCCHH--HHHHH----HHcCCc-eecH-HHHHhCCCEEEECCChHH
Confidence 456899999 9999999999998654 355544 33211 11111 000111 1111 223468999999999765
Q ss_pred hHHHHh--hCCCCCEEEEcCCccc
Q 015441 142 TQEIIK--GLPKSLKIVDLSADFR 163 (406)
Q Consensus 142 s~~~~~--~l~~G~~VIDlSa~fR 163 (406)
..++.. ....+..|||+++...
T Consensus 96 ~~~v~~l~~~~~~~~vv~~s~g~~ 119 (215)
T 2vns_A 96 YSSLCSLSDQLAGKILVDVSNPTE 119 (215)
T ss_dssp SGGGGGGHHHHTTCEEEECCCCCH
T ss_pred HHHHHHHHHhcCCCEEEEeCCCcc
Confidence 444432 1126789999988653
No 173
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=95.87 E-value=0.0068 Score=58.00 Aligned_cols=32 Identities=19% Similarity=0.444 Sum_probs=27.5
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
++|.|.||||++|+.|++.|.+++..+++.+.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~ 32 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLD 32 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEe
Confidence 37999999999999999999877557877775
No 174
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.86 E-value=0.007 Score=61.85 Aligned_cols=96 Identities=19% Similarity=0.278 Sum_probs=53.3
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccc-----cccCcc--------ccCCCcccccCcc-cC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGS-----VFPHLI--------SQDLPTMVAVKDA-DF 127 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~-----v~p~l~--------~~~~~~~~~~~~~-~~ 127 (406)
|++||+|+| +|++|..+...|++.- .+++.+.-+...-..+.. ..|.+. ...+. . ..+.. ..
T Consensus 1 M~mkI~VIG-~G~vG~~lA~~La~~G-~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~-~-t~d~~ea~ 76 (450)
T 3gg2_A 1 MSLDIAVVG-IGYVGLVSATCFAELG-ANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLR-F-GTEIEQAV 76 (450)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEE-E-ESCHHHHG
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHhcC-CEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEE-E-ECCHHHHH
Confidence 346999999 8999999999998653 466655321110001110 011110 00010 0 11112 24
Q ss_pred CCCCEEEEcCCCcc----------hHH----HHhhCCCCCEEEEcCCc
Q 015441 128 SNVDAVFCCLPHGT----------TQE----IIKGLPKSLKIVDLSAD 161 (406)
Q Consensus 128 ~~vDvVF~al~~~~----------s~~----~~~~l~~G~~VIDlSa~ 161 (406)
.++|+||.|+|... -.+ +.+.+..|..||+.|.-
T Consensus 77 ~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv 124 (450)
T 3gg2_A 77 PEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTV 124 (450)
T ss_dssp GGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCC
T ss_pred hcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeC
Confidence 68999999998763 222 33445678899998863
No 175
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=95.86 E-value=0.0043 Score=60.03 Aligned_cols=92 Identities=12% Similarity=0.133 Sum_probs=54.0
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc-CCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK-AGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~-~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
|+||+||| .|.+|..+.+.|.+...-++. +.+++. .. .... +........... .+...++|+||+|+|...
T Consensus 24 ~~~I~iIG-~G~mG~~~A~~L~~~G~~~V~-~~dr~~~~~-~~~~----~~~~g~~~~~~~-~e~~~~aDvVi~~vp~~~ 95 (312)
T 3qsg_A 24 AMKLGFIG-FGEAASAIASGLRQAGAIDMA-AYDAASAES-WRPR----AEELGVSCKASV-AEVAGECDVIFSLVTAQA 95 (312)
T ss_dssp -CEEEEEC-CSHHHHHHHHHHHHHSCCEEE-EECSSCHHH-HHHH----HHHTTCEECSCH-HHHHHHCSEEEECSCTTT
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCCeEE-EEcCCCCHH-HHHH----HHHCCCEEeCCH-HHHHhcCCEEEEecCchh
Confidence 46999999 899999999999864322444 444421 11 1110 000011101111 122357899999999887
Q ss_pred hHHHHh----hCCCCCEEEEcCCcc
Q 015441 142 TQEIIK----GLPKSLKIVDLSADF 162 (406)
Q Consensus 142 s~~~~~----~l~~G~~VIDlSa~f 162 (406)
..+.+. .+..|..|||.|+..
T Consensus 96 ~~~~~~~l~~~l~~~~ivvd~st~~ 120 (312)
T 3qsg_A 96 ALEVAQQAGPHLCEGALYADFTSCS 120 (312)
T ss_dssp HHHHHHHHGGGCCTTCEEEECCCCC
T ss_pred HHHHHHhhHhhcCCCCEEEEcCCCC
Confidence 766543 345688999998753
No 176
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=95.85 E-value=0.0041 Score=58.77 Aligned_cols=34 Identities=21% Similarity=0.252 Sum_probs=27.9
Q ss_pred CccEEEEECcccHHHHHHHHHHHcC-CCceEEEEe
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANH-PYFGIKLMT 95 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~h-p~~elv~l~ 95 (406)
|+++|.|.||||++|+.|++.|.+. +..+++.+.
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~ 35 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLRKLYGTENVIASD 35 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEE
T ss_pred CCceEEEECCccHHHHHHHHHHHHhCCCCEEEEEc
Confidence 3468999999999999999998865 456777765
No 177
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=95.84 E-value=0.0092 Score=56.34 Aligned_cols=33 Identities=21% Similarity=0.420 Sum_probs=27.1
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
|+++|.|.||||++|+.|++.|.+.. .+++.+.
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 38 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASG-EEVTVLD 38 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCC-CEEEEEe
Confidence 45789999999999999999998764 4676664
No 178
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=95.84 E-value=0.0064 Score=58.96 Aligned_cols=90 Identities=19% Similarity=0.304 Sum_probs=53.4
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
+++||+|+| .|.+|..+.+.|.... .++... +++.. +... +....+...... .+...++|+||.|+|...
T Consensus 30 ~~~~I~iIG-~G~mG~~~a~~l~~~G-~~V~~~-dr~~~--~~~~----l~~~g~~~~~~~-~e~~~~aDvVi~~vp~~~ 99 (320)
T 4dll_A 30 YARKITFLG-TGSMGLPMARRLCEAG-YALQVW-NRTPA--RAAS----LAALGATIHEQA-RAAARDADIVVSMLENGA 99 (320)
T ss_dssp CCSEEEEEC-CTTTHHHHHHHHHHTT-CEEEEE-CSCHH--HHHH----HHTTTCEEESSH-HHHHTTCSEEEECCSSHH
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHhCC-CeEEEE-cCCHH--HHHH----HHHCCCEeeCCH-HHHHhcCCEEEEECCCHH
Confidence 456999999 8999999999998653 455444 43221 1111 000011111111 223468999999999643
Q ss_pred h-HHHH------hhCCCCCEEEEcCCc
Q 015441 142 T-QEII------KGLPKSLKIVDLSAD 161 (406)
Q Consensus 142 s-~~~~------~~l~~G~~VIDlSa~ 161 (406)
. .+.. +.+..|..|||.|..
T Consensus 100 ~~~~v~~~~~~~~~l~~~~~vi~~st~ 126 (320)
T 4dll_A 100 VVQDVLFAQGVAAAMKPGSLFLDMASI 126 (320)
T ss_dssp HHHHHHTTTCHHHHCCTTCEEEECSCC
T ss_pred HHHHHHcchhHHhhCCCCCEEEecCCC
Confidence 3 3332 235678899999875
No 179
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=95.82 E-value=0.0041 Score=60.51 Aligned_cols=33 Identities=24% Similarity=0.417 Sum_probs=26.8
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCc------eEEEE
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYF------GIKLM 94 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~------elv~l 94 (406)
+++||+|+||+|++|+.|++.|.....+ +++.+
T Consensus 3 ~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~ 41 (327)
T 1y7t_A 3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLL 41 (327)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEE
Confidence 3469999999999999999998865543 67665
No 180
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=95.82 E-value=0.008 Score=58.01 Aligned_cols=85 Identities=15% Similarity=0.197 Sum_probs=54.8
Q ss_pred cEEEEECcccHHHHHH-HHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccC--CCCCEEEEcCCC
Q 015441 64 VRIGLLGASGYTGAEI-VRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCCLPH 139 (406)
Q Consensus 64 ikVaIvGATG~vG~eL-lrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~al~~ 139 (406)
+||+|+| +|.+|+.+ ++.|.+ +.++++++.++... .+.+...++ . . ..+.+. ++.+ .++|+|+.|+|+
T Consensus 1 ~~vgiiG-~G~~g~~~~~~~l~~-~~~~~vav~d~~~~~~~~~~~~~g---~-~-~~~~~~-~~~l~~~~~D~V~i~tp~ 72 (332)
T 2glx_A 1 NRWGLIG-ASTIAREWVIGAIRA-TGGEVVSMMSTSAERGAAYATENG---I-G-KSVTSV-EELVGDPDVDAVYVSTTN 72 (332)
T ss_dssp CEEEEES-CCHHHHHTHHHHHHH-TTCEEEEEECSCHHHHHHHHHHTT---C-S-CCBSCH-HHHHTCTTCCEEEECSCG
T ss_pred CeEEEEc-ccHHHHHhhhHHhhc-CCCeEEEEECCCHHHHHHHHHHcC---C-C-cccCCH-HHHhcCCCCCEEEEeCCh
Confidence 5899999 69999998 888887 88999999875431 111111111 0 0 011111 1112 268999999998
Q ss_pred cchHHHHhh-CCCCCEEE
Q 015441 140 GTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 140 ~~s~~~~~~-l~~G~~VI 156 (406)
..-.+++.. +++|+.|+
T Consensus 73 ~~h~~~~~~al~~Gk~v~ 90 (332)
T 2glx_A 73 ELHREQTLAAIRAGKHVL 90 (332)
T ss_dssp GGHHHHHHHHHHTTCEEE
T ss_pred hHhHHHHHHHHHCCCeEE
Confidence 877777754 57888665
No 181
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=95.81 E-value=0.0046 Score=62.27 Aligned_cols=92 Identities=14% Similarity=0.224 Sum_probs=55.5
Q ss_pred ccEEEEECcccH---HHHHHHHHHHcCCCceEEE-EeccCcC-CccccccccCccc-cCCCccccc-Cccc--CCCCCEE
Q 015441 63 QVRIGLLGASGY---TGAEIVRLLANHPYFGIKL-MTADRKA-GQSIGSVFPHLIS-QDLPTMVAV-KDAD--FSNVDAV 133 (406)
Q Consensus 63 ~ikVaIvGATG~---vG~eLlrlL~~hp~~elv~-l~s~~~~-G~~i~~v~p~l~~-~~~~~~~~~-~~~~--~~~vDvV 133 (406)
++|||||| +|. +|+..++.+...+.+++++ +.++... .+.+...+. +.. .....++++ +.+. -.++|+|
T Consensus 37 ~~rvgiiG-~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g-~~~~~~~~~~~~ll~~~~~~~~~vD~V 114 (417)
T 3v5n_A 37 RIRLGMVG-GGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELG-LDPSRVYSDFKEMAIREAKLKNGIEAV 114 (417)
T ss_dssp CEEEEEES-CC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHT-CCGGGBCSCHHHHHHHHHHCTTCCSEE
T ss_pred cceEEEEc-CCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcC-CCcccccCCHHHHHhcccccCCCCcEE
Confidence 58999999 776 9999999888888899997 7664321 111111110 000 000111111 0000 0258999
Q ss_pred EEcCCCcchHHHHhh-CCCCCEEE
Q 015441 134 FCCLPHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 134 F~al~~~~s~~~~~~-l~~G~~VI 156 (406)
+.|+|+..=.+++.+ +++|+.|+
T Consensus 115 ~I~tp~~~H~~~~~~al~aGkhVl 138 (417)
T 3v5n_A 115 AIVTPNHVHYAAAKEFLKRGIHVI 138 (417)
T ss_dssp EECSCTTSHHHHHHHHHTTTCEEE
T ss_pred EECCCcHHHHHHHHHHHhCCCeEE
Confidence 999999877787765 68898776
No 182
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=95.79 E-value=0.006 Score=58.26 Aligned_cols=90 Identities=13% Similarity=0.241 Sum_probs=52.4
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
+|+||+|+| .|.+|..+.+.|.... .++..+ +++.. +... +....+...... .+...++|+||.|+|...
T Consensus 2 ~m~~I~iiG-~G~mG~~~a~~l~~~G-~~V~~~-d~~~~--~~~~----~~~~g~~~~~~~-~~~~~~aDvvi~~vp~~~ 71 (302)
T 2h78_A 2 HMKQIAFIG-LGHMGAPMATNLLKAG-YLLNVF-DLVQS--AVDG----LVAAGASAARSA-RDAVQGADVVISMLPASQ 71 (302)
T ss_dssp -CCEEEEEC-CSTTHHHHHHHHHHTT-CEEEEE-CSSHH--HHHH----HHHTTCEECSSH-HHHHTTCSEEEECCSCHH
T ss_pred CCCEEEEEe-ecHHHHHHHHHHHhCC-CeEEEE-cCCHH--HHHH----HHHCCCeEcCCH-HHHHhCCCeEEEECCCHH
Confidence 357999999 8999999999998653 355544 43211 1111 000011101111 123467999999998654
Q ss_pred h-HHHHh-------hCCCCCEEEEcCCc
Q 015441 142 T-QEIIK-------GLPKSLKIVDLSAD 161 (406)
Q Consensus 142 s-~~~~~-------~l~~G~~VIDlSa~ 161 (406)
. .+... .+..|..|||.|..
T Consensus 72 ~~~~v~~~~~~~~~~l~~~~~vi~~st~ 99 (302)
T 2h78_A 72 HVEGLYLDDDGLLAHIAPGTLVLECSTI 99 (302)
T ss_dssp HHHHHHHSSSCGGGSSCSSCEEEECSCC
T ss_pred HHHHHHcCchhHHhcCCCCcEEEECCCC
Confidence 3 33332 23567899998764
No 183
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=95.78 E-value=0.019 Score=55.78 Aligned_cols=99 Identities=20% Similarity=0.277 Sum_probs=56.0
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-Cccccccc--cCccccCCCcccccCcccCCCCCEEEEcC
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVF--PHLISQDLPTMVAVKDADFSNVDAVFCCL 137 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~--p~l~~~~~~~~~~~~~~~~~~vDvVF~al 137 (406)
+|.+||+|+| .|.+|..+...|.+.- .++..+ +++.. -+.+.... +.+.+..+......+..+..++|+||+|+
T Consensus 12 ~~~~kI~iIG-~G~mG~ala~~L~~~G-~~V~~~-~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~aDvVil~v 88 (335)
T 1z82_A 12 HMEMRFFVLG-AGSWGTVFAQMLHENG-EEVILW-ARRKEIVDLINVSHTSPYVEESKITVRATNDLEEIKKEDILVIAI 88 (335)
T ss_dssp --CCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEE-CSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGGCCTTEEEEECS
T ss_pred ccCCcEEEEC-cCHHHHHHHHHHHhCC-CeEEEE-eCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHHhcCCCEEEEEC
Confidence 5668999999 9999999999887532 355444 33211 01111100 00011000000011222256899999999
Q ss_pred CCcchHHHHhhCC-CCCEEEEcCCcc
Q 015441 138 PHGTTQEIIKGLP-KSLKIVDLSADF 162 (406)
Q Consensus 138 ~~~~s~~~~~~l~-~G~~VIDlSa~f 162 (406)
+.....+.++.+. .+..|||++.-.
T Consensus 89 k~~~~~~v~~~l~~~~~~vv~~~nGi 114 (335)
T 1z82_A 89 PVQYIREHLLRLPVKPSMVLNLSKGI 114 (335)
T ss_dssp CGGGHHHHHTTCSSCCSEEEECCCCC
T ss_pred CHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 9876677766654 678899998544
No 184
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=95.77 E-value=0.024 Score=53.49 Aligned_cols=31 Identities=23% Similarity=0.531 Sum_probs=25.7
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
+||.|.||||++|+.|++.|.++. .+++.+.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 31 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELG-YEVVVVD 31 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-CEEEEEe
Confidence 479999999999999999998764 4666664
No 185
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.77 E-value=0.0039 Score=64.11 Aligned_cols=94 Identities=19% Similarity=0.282 Sum_probs=55.7
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCcc--ccCCCcccccCcccCCCCCEEEEcCCC
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLI--SQDLPTMVAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~--~~~~~~~~~~~~~~~~~vDvVF~al~~ 139 (406)
+.||+|+|| |.+|+.+++.|.+++..+++.+ +++.. .+.+... .... ..++.....+ .+.+.++|+|+.|+|.
T Consensus 23 ~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~-~R~~~ka~~la~~-~~~~~~~~D~~d~~~l-~~~l~~~DvVIn~tp~ 98 (467)
T 2axq_A 23 GKNVLLLGS-GFVAQPVIDTLAANDDINVTVA-CRTLANAQALAKP-SGSKAISLDVTDDSAL-DKVLADNDVVISLIPY 98 (467)
T ss_dssp CEEEEEECC-STTHHHHHHHHHTSTTEEEEEE-ESSHHHHHHHHGG-GTCEEEECCTTCHHHH-HHHHHTSSEEEECSCG
T ss_pred CCEEEEECC-hHHHHHHHHHHHhCCCCeEEEE-ECCHHHHHHHHHh-cCCcEEEEecCCHHHH-HHHHcCCCEEEECCch
Confidence 468999997 9999999999998877775444 44321 1111110 0010 0011111111 1123579999999998
Q ss_pred cchHHHHhh-CCCCCEEEEcCC
Q 015441 140 GTTQEIIKG-LPKSLKIVDLSA 160 (406)
Q Consensus 140 ~~s~~~~~~-l~~G~~VIDlSa 160 (406)
.....+... +++|..++|.+.
T Consensus 99 ~~~~~v~~a~l~~g~~vvd~~~ 120 (467)
T 2axq_A 99 TFHPNVVKSAIRTKTDVVTSSY 120 (467)
T ss_dssp GGHHHHHHHHHHHTCEEEECSC
T ss_pred hhhHHHHHHHHhcCCEEEEeec
Confidence 765555543 467888998753
No 186
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=95.77 E-value=0.0027 Score=62.83 Aligned_cols=90 Identities=10% Similarity=0.173 Sum_probs=54.8
Q ss_pred CCccEEEEECcccHHHHH-HH----HHHHcCCCceEE---------EEeccCcC-CccccccccCccccCCCcccccCcc
Q 015441 61 EKQVRIGLLGASGYTGAE-IV----RLLANHPYFGIK---------LMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDA 125 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~e-Ll----rlL~~hp~~elv---------~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~ 125 (406)
.+++||+|+|++|.+|+. .+ +.+.+.+.++++ ++.++... .+.+...++ . . ..+.++ ++
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~---~-~-~~~~~~-~~ 77 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFN---I-A-RWTTDL-DA 77 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTT---C-C-CEESCH-HH
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhC---C-C-cccCCH-HH
Confidence 446899999999999997 66 777766655433 56654321 111211111 0 0 011111 11
Q ss_pred cC--CCCCEEEEcCCCcchHHHHhh-CCCCCEEE
Q 015441 126 DF--SNVDAVFCCLPHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 126 ~~--~~vDvVF~al~~~~s~~~~~~-l~~G~~VI 156 (406)
.+ .++|+|+.|+|+..-.+++.+ +++|+.|+
T Consensus 78 ll~~~~iD~V~i~tp~~~h~~~~~~al~~Gk~V~ 111 (383)
T 3oqb_A 78 ALADKNDTMFFDAATTQARPGLLTQAINAGKHVY 111 (383)
T ss_dssp HHHCSSCCEEEECSCSSSSHHHHHHHHTTTCEEE
T ss_pred HhcCCCCCEEEECCCchHHHHHHHHHHHCCCeEE
Confidence 11 368999999998877787764 68999877
No 187
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=95.75 E-value=0.0053 Score=57.95 Aligned_cols=32 Identities=22% Similarity=0.226 Sum_probs=26.0
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
|++|.|.||||++|+.+++.|.+.. .+++.+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAG-NPTYALV 33 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHT-CCEEEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCC-CcEEEEE
Confidence 4689999999999999999988653 4666654
No 188
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=95.73 E-value=0.026 Score=47.30 Aligned_cols=92 Identities=12% Similarity=0.242 Sum_probs=56.5
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc--CCccccccccCccccCCCcccccCcccCCCCCEEEEcCCC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK--AGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~--~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~ 139 (406)
++.++.|+| +|..|+++++.|.+++.++++++.+... .|+.+.. .|-+ + ...+... . .-.++|.||+|.|.
T Consensus 3 ~~~~vlIiG-aG~~g~~l~~~l~~~~g~~vvg~~d~~~~~~g~~i~g-~pV~-g--~~~l~~~-~-~~~~id~viia~~~ 75 (141)
T 3nkl_A 3 AKKKVLIYG-AGSAGLQLANMLRQGKEFHPIAFIDDDRKKHKTTMQG-ITIY-R--PKYLERL-I-KKHCISTVLLAVPS 75 (141)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHHSSSEEEEEEECSCGGGTTCEETT-EEEE-C--GGGHHHH-H-HHHTCCEEEECCTT
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCcEEEEEEECCcccCCCEecC-eEEE-C--HHHHHHH-H-HHCCCCEEEEeCCC
Confidence 346899999 7888999999998888899999987543 2322210 1111 0 0001000 0 00268999999986
Q ss_pred cch---HHHHhhC-CCCCEEEEcCC
Q 015441 140 GTT---QEIIKGL-PKSLKIVDLSA 160 (406)
Q Consensus 140 ~~s---~~~~~~l-~~G~~VIDlSa 160 (406)
... .++...+ ..|+.|..+..
T Consensus 76 ~~~~~~~~i~~~l~~~gv~v~~vP~ 100 (141)
T 3nkl_A 76 ASQVQKKVIIESLAKLHVEVLTIPN 100 (141)
T ss_dssp SCHHHHHHHHHHHHTTTCEEEECCC
T ss_pred CCHHHHHHHHHHHHHcCCeEEECCC
Confidence 544 4455555 57888775544
No 189
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=95.69 E-value=0.0083 Score=61.12 Aligned_cols=97 Identities=13% Similarity=0.200 Sum_probs=54.0
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccc-----cccCccc---cCCCccc-ccC-cccCCCC
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGS-----VFPHLIS---QDLPTMV-AVK-DADFSNV 130 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~-----v~p~l~~---~~~~~~~-~~~-~~~~~~v 130 (406)
.+++||+|+| +|++|..+...|++ ..+++.+.-....-..+.. ..|.+.. .....+. ..+ .+...++
T Consensus 34 ~~~mkIaVIG-lG~mG~~lA~~La~--G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~a 110 (432)
T 3pid_A 34 SEFMKITISG-TGYVGLSNGVLIAQ--NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNA 110 (432)
T ss_dssp -CCCEEEEEC-CSHHHHHHHHHHHT--TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTC
T ss_pred cCCCEEEEEC-cCHHHHHHHHHHHc--CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCC
Confidence 3356999999 89999999999886 4677665321110000100 0011100 0000011 112 1235689
Q ss_pred CEEEEcCCCcch---------------HHHHhhCCCCCEEEEcCCc
Q 015441 131 DAVFCCLPHGTT---------------QEIIKGLPKSLKIVDLSAD 161 (406)
Q Consensus 131 DvVF~al~~~~s---------------~~~~~~l~~G~~VIDlSa~ 161 (406)
|+||.|+|.... ..+.+ +..|..|||.|.-
T Consensus 111 DvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv 155 (432)
T 3pid_A 111 DYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTI 155 (432)
T ss_dssp SEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCC
T ss_pred CEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCC
Confidence 999999998631 22334 6678899998864
No 190
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.68 E-value=0.022 Score=51.74 Aligned_cols=71 Identities=14% Similarity=0.223 Sum_probs=49.7
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT 142 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s 142 (406)
++||+|+| +|.+|..+.+.|.+.- .++..+ +++.. ...++|+||+|++....
T Consensus 19 ~~~I~iiG-~G~mG~~la~~l~~~g-~~V~~~-~~~~~-------------------------~~~~aD~vi~av~~~~~ 70 (209)
T 2raf_A 19 GMEITIFG-KGNMGQAIGHNFEIAG-HEVTYY-GSKDQ-------------------------ATTLGEIVIMAVPYPAL 70 (209)
T ss_dssp -CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEE-CTTCC-------------------------CSSCCSEEEECSCHHHH
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCC-CEEEEE-cCCHH-------------------------HhccCCEEEEcCCcHHH
Confidence 35899999 8999999999998643 355443 32210 23468999999996655
Q ss_pred HHHHhhC----CCCCEEEEcCCcc
Q 015441 143 QEIIKGL----PKSLKIVDLSADF 162 (406)
Q Consensus 143 ~~~~~~l----~~G~~VIDlSa~f 162 (406)
.+.++.+ . +..|||.++.+
T Consensus 71 ~~v~~~l~~~~~-~~~vi~~~~g~ 93 (209)
T 2raf_A 71 AALAKQYATQLK-GKIVVDITNPL 93 (209)
T ss_dssp HHHHHHTHHHHT-TSEEEECCCCB
T ss_pred HHHHHHHHHhcC-CCEEEEECCCC
Confidence 5555433 4 88999998855
No 191
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=95.67 E-value=0.013 Score=55.09 Aligned_cols=92 Identities=18% Similarity=0.129 Sum_probs=53.6
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCC-CceEEEEeccCcCCccccccccCccccCCCcccccCcccCC-CCCEEEEcCCCc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHP-YFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFS-NVDAVFCCLPHG 140 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp-~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~-~vDvVF~al~~~ 140 (406)
|+||+|+| .|.+|+.+.+.|.... ..++..+ +++.. +..... .+ +.......+. .+.+. ++|+||+|+|..
T Consensus 1 m~~I~iIG-~G~mG~~~a~~l~~~g~~~~V~~~-d~~~~--~~~~~~-~~-g~~~~~~~~~-~~~~~~~aDvVilavp~~ 73 (281)
T 2g5c_A 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGY-DINPE--SISKAV-DL-GIIDEGTTSI-AKVEDFSPDFVMLSSPVR 73 (281)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEE-CSCHH--HHHHHH-HT-TSCSEEESCG-GGGGGTCCSEEEECSCHH
T ss_pred CcEEEEEe-cCHHHHHHHHHHHhcCCCcEEEEE-eCCHH--HHHHHH-HC-CCcccccCCH-HHHhcCCCCEEEEcCCHH
Confidence 35899999 9999999999998543 2355443 33211 111100 00 1000001111 22346 899999999987
Q ss_pred chHHHHh----hCCCCCEEEEcCCc
Q 015441 141 TTQEIIK----GLPKSLKIVDLSAD 161 (406)
Q Consensus 141 ~s~~~~~----~l~~G~~VIDlSa~ 161 (406)
...+.+. .+..+..|+|.++.
T Consensus 74 ~~~~v~~~l~~~l~~~~iv~~~~~~ 98 (281)
T 2g5c_A 74 TFREIAKKLSYILSEDATVTDQGSV 98 (281)
T ss_dssp HHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred HHHHHHHHHHhhCCCCcEEEECCCC
Confidence 6655543 34567889998764
No 192
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=95.65 E-value=0.0043 Score=58.99 Aligned_cols=88 Identities=16% Similarity=0.231 Sum_probs=51.9
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc-
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG- 140 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~- 140 (406)
|+||+|+| .|.+|..+.+.|.... .++... +++.. -+.+.. ......... .+...++|+||.|+|..
T Consensus 1 M~~I~iiG-~G~mG~~~a~~l~~~G-~~V~~~-dr~~~~~~~~~~-------~g~~~~~~~-~~~~~~advvi~~v~~~~ 69 (287)
T 3pdu_A 1 MTTYGFLG-LGIMGGPMAANLVRAG-FDVTVW-NRNPAKCAPLVA-------LGARQASSP-AEVCAACDITIAMLADPA 69 (287)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHHHHT-CCEEEE-CSSGGGGHHHHH-------HTCEECSCH-HHHHHHCSEEEECCSSHH
T ss_pred CCeEEEEc-cCHHHHHHHHHHHHCC-CeEEEE-cCCHHHHHHHHH-------CCCeecCCH-HHHHHcCCEEEEEcCCHH
Confidence 46899999 9999999999988542 355444 33221 111111 011101111 12235789999999976
Q ss_pred chHHHH---h----hCCCCCEEEEcCCc
Q 015441 141 TTQEII---K----GLPKSLKIVDLSAD 161 (406)
Q Consensus 141 ~s~~~~---~----~l~~G~~VIDlSa~ 161 (406)
...+.+ . .+..|..|||.|..
T Consensus 70 ~~~~v~~~~~~l~~~l~~g~~vv~~st~ 97 (287)
T 3pdu_A 70 AAREVCFGANGVLEGIGGGRGYIDMSTV 97 (287)
T ss_dssp HHHHHHHSTTCGGGTCCTTCEEEECSCC
T ss_pred HHHHHHcCchhhhhcccCCCEEEECCCC
Confidence 334444 2 23568899999874
No 193
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=95.65 E-value=0.0095 Score=57.51 Aligned_cols=91 Identities=14% Similarity=0.195 Sum_probs=58.2
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCC--CCCEEEEcCCC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFS--NVDAVFCCLPH 139 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~--~vDvVF~al~~ 139 (406)
...+|+|+||||..|+.+++.|.++ .+++++-......|+.+. + ++.+..+ .+... ++|+++.|+|+
T Consensus 12 ~~~~v~V~Gasg~~G~~~~~~l~~~-g~~~V~~VnP~~~g~~i~-------G--~~vy~sl-~el~~~~~~Dv~ii~vp~ 80 (294)
T 2yv1_A 12 ENTKAIVQGITGRQGSFHTKKMLEC-GTKIVGGVTPGKGGQNVH-------G--VPVFDTV-KEAVKETDANASVIFVPA 80 (294)
T ss_dssp TTCCEEEETTTSHHHHHHHHHHHHT-TCCEEEEECTTCTTCEET-------T--EEEESSH-HHHHHHHCCCEEEECCCH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhC-CCeEEEEeCCCCCCceEC-------C--EeeeCCH-HHHhhcCCCCEEEEccCH
Confidence 3468999999999999999998876 455554444433333221 1 1112111 11112 68999999999
Q ss_pred cchHHHHhhC-CCCCE-EEEcCCccc
Q 015441 140 GTTQEIIKGL-PKSLK-IVDLSADFR 163 (406)
Q Consensus 140 ~~s~~~~~~l-~~G~~-VIDlSa~fR 163 (406)
....+.+..+ ++|++ +|=.+.-|.
T Consensus 81 ~~~~~~v~ea~~~Gi~~vVi~t~G~~ 106 (294)
T 2yv1_A 81 PFAKDAVFEAIDAGIELIVVITEHIP 106 (294)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSCCC
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 9888888754 77876 454565553
No 194
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=95.64 E-value=0.0061 Score=56.64 Aligned_cols=33 Identities=24% Similarity=0.293 Sum_probs=26.9
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
||.+|.|.||||++|+.|++.|.+.. .+++.+.
T Consensus 1 M~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (267)
T 3ay3_A 1 MLNRLLVTGAAGGVGSAIRPHLGTLA-HEVRLSD 33 (267)
T ss_dssp CEEEEEEESTTSHHHHHHGGGGGGTE-EEEEECC
T ss_pred CCceEEEECCCCHHHHHHHHHHHhCC-CEEEEEe
Confidence 45689999999999999999998764 5665554
No 195
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=95.61 E-value=0.006 Score=60.66 Aligned_cols=93 Identities=10% Similarity=0.095 Sum_probs=56.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCc---cccccccCccc-cCCCccc-ccC---------cc--cC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQ---SIGSVFPHLIS-QDLPTMV-AVK---------DA--DF 127 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~---~i~~v~p~l~~-~~~~~~~-~~~---------~~--~~ 127 (406)
.||+|+|+||-||+.-++.+.+|+.+++++++..+...+ ...+..|.+.. .+-.... .+. .+ ..
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~~n~~~l~~q~~~f~p~~v~v~~~~~~~~~l~~~~~G~~~l~el~~~ 83 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKVKGIRLIGISFHSNLELAFKIVKEFNVKNVAITGDVEFEDSSINVWKGSHSIEEMLEA 83 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEESSCHHHHHHHHHHHTCCEEEECSSCCCCCSSSEEEESTTHHHHHHHH
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEccCCHHHHHHHHHHcCCCEEEEccHHHHHHHHHHHccCHHHHHHHhcC
Confidence 689999999999999999999888899999965443321 11111222110 0000000 000 01 11
Q ss_pred CCCCEEEEcCCCcchHHHH-hhCCCCCEEE
Q 015441 128 SNVDAVFCCLPHGTTQEII-KGLPKSLKIV 156 (406)
Q Consensus 128 ~~vDvVF~al~~~~s~~~~-~~l~~G~~VI 156 (406)
.++|+|..|++.....+-. .++++|..|.
T Consensus 84 ~~~D~Vv~AivG~aGL~ptlaAi~aGK~va 113 (376)
T 3a06_A 84 LKPDITMVAVSGFSGLRAVLASLEHSKRVC 113 (376)
T ss_dssp HCCSEEEECCCSTTHHHHHHHHHHHCSEEE
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHHCCCEEE
Confidence 3689999999866554433 3457788876
No 196
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=95.61 E-value=0.0036 Score=62.55 Aligned_cols=93 Identities=19% Similarity=0.249 Sum_probs=56.8
Q ss_pred CccEEEEECcccH---HHHHHHHHHHcCCCceEEE-EeccCcC-CccccccccCccc-cCCCccccc-Cccc--CCCCCE
Q 015441 62 KQVRIGLLGASGY---TGAEIVRLLANHPYFGIKL-MTADRKA-GQSIGSVFPHLIS-QDLPTMVAV-KDAD--FSNVDA 132 (406)
Q Consensus 62 ~~ikVaIvGATG~---vG~eLlrlL~~hp~~elv~-l~s~~~~-G~~i~~v~p~l~~-~~~~~~~~~-~~~~--~~~vDv 132 (406)
+++|||||| +|. +|+..++.+...+.+++++ +.++... .+.+...+. +.. .-...++++ +.+. -.++|+
T Consensus 11 ~~~rvgiiG-~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g-~~~~~~~~~~~~ll~~~~~~~~~vD~ 88 (398)
T 3dty_A 11 QPIRWAMVG-GGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLG-VDSERCYADYLSMFEQEARRADGIQA 88 (398)
T ss_dssp SCEEEEEEE-CCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTT-CCGGGBCSSHHHHHHHHTTCTTCCSE
T ss_pred CcceEEEEc-CCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhC-CCcceeeCCHHHHHhcccccCCCCCE
Confidence 358999999 887 9999999888888899998 6654321 111111110 000 000111111 0000 025899
Q ss_pred EEEcCCCcchHHHHhh-CCCCCEEE
Q 015441 133 VFCCLPHGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 133 VF~al~~~~s~~~~~~-l~~G~~VI 156 (406)
|+.|+|+..=.+++.+ +++|+.|+
T Consensus 89 V~i~tp~~~H~~~~~~al~aGkhVl 113 (398)
T 3dty_A 89 VSIATPNGTHYSITKAALEAGLHVV 113 (398)
T ss_dssp EEEESCGGGHHHHHHHHHHTTCEEE
T ss_pred EEECCCcHHHHHHHHHHHHCCCeEE
Confidence 9999999877777764 58898876
No 197
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=95.61 E-value=0.0089 Score=59.31 Aligned_cols=90 Identities=16% Similarity=0.283 Sum_probs=53.3
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCC---CEEEEcCCC
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNV---DAVFCCLPH 139 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~v---DvVF~al~~ 139 (406)
++||+||| .|.+|..+.+.|.++. .++..+ +++.. ++.. +..........+ .+...++ |+||+|+|.
T Consensus 22 ~mkIgiIG-lG~mG~~~A~~L~~~G-~~V~v~-dr~~~--~~~~----l~~~g~~~~~s~-~e~~~~a~~~DvVi~~vp~ 91 (358)
T 4e21_A 22 SMQIGMIG-LGRMGADMVRRLRKGG-HECVVY-DLNVN--AVQA----LEREGIAGARSI-EEFCAKLVKPRVVWLMVPA 91 (358)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEE-CSCHH--HHHH----HHTTTCBCCSSH-HHHHHHSCSSCEEEECSCG
T ss_pred CCEEEEEC-chHHHHHHHHHHHhCC-CEEEEE-eCCHH--HHHH----HHHCCCEEeCCH-HHHHhcCCCCCEEEEeCCH
Confidence 36999999 9999999999998764 455444 43221 1111 000011101111 1112344 999999998
Q ss_pred cchHHHHh----hCCCCCEEEEcCCcc
Q 015441 140 GTTQEIIK----GLPKSLKIVDLSADF 162 (406)
Q Consensus 140 ~~s~~~~~----~l~~G~~VIDlSa~f 162 (406)
....+.+. .+..|..|||.|+..
T Consensus 92 ~~v~~vl~~l~~~l~~g~iiId~st~~ 118 (358)
T 4e21_A 92 AVVDSMLQRMTPLLAANDIVIDGGNSH 118 (358)
T ss_dssp GGHHHHHHHHGGGCCTTCEEEECSSCC
T ss_pred HHHHHHHHHHHhhCCCCCEEEeCCCCC
Confidence 85444443 345789999998764
No 198
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=95.59 E-value=0.016 Score=55.04 Aligned_cols=30 Identities=23% Similarity=0.259 Sum_probs=24.8
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEE
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLM 94 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l 94 (406)
++|.|.||||++|+.|++.|.+.. .+++.+
T Consensus 4 ~~ilVtGatG~iG~~l~~~L~~~g-~~v~~~ 33 (321)
T 1e6u_A 4 QRVFIAGHRGMVGSAIRRQLEQRG-DVELVL 33 (321)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCT-TEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC-CeEEEE
Confidence 589999999999999999998753 455554
No 199
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=95.58 E-value=0.019 Score=56.17 Aligned_cols=85 Identities=12% Similarity=0.183 Sum_probs=51.5
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc-h
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT-T 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~-s 142 (406)
.+|+|+| .|.+|+.+.+.|..+ .+++.... ++. +.... +.. .. ...++ ++.+.++|+|++++|... +
T Consensus 141 ~tvGIIG-lG~IG~~vA~~l~~~-G~~V~~~d-r~~--~~~~~----~~~-~~-~~~~l-~ell~~aDvV~l~lPlt~~T 208 (324)
T 3hg7_A 141 RTLLILG-TGSIGQHIAHTGKHF-GMKVLGVS-RSG--RERAG----FDQ-VY-QLPAL-NKMLAQADVIVSVLPATRET 208 (324)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEC-SSC--CCCTT----CSE-EE-CGGGH-HHHHHTCSEEEECCCCCSSS
T ss_pred ceEEEEE-ECHHHHHHHHHHHhC-CCEEEEEc-CCh--HHhhh----hhc-cc-ccCCH-HHHHhhCCEEEEeCCCCHHH
Confidence 5899999 999999999999876 46766553 221 11110 000 00 01112 223468999999999543 3
Q ss_pred HHHH-----hhCCCCCEEEEcCC
Q 015441 143 QEII-----KGLPKSLKIVDLSA 160 (406)
Q Consensus 143 ~~~~-----~~l~~G~~VIDlSa 160 (406)
..+. ..++.|..+||.|-
T Consensus 209 ~~li~~~~l~~mk~gailIN~aR 231 (324)
T 3hg7_A 209 HHLFTASRFEHCKPGAILFNVGR 231 (324)
T ss_dssp TTSBCTTTTTCSCTTCEEEECSC
T ss_pred HHHhHHHHHhcCCCCcEEEECCC
Confidence 3322 33456899998774
No 200
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=95.58 E-value=0.0048 Score=58.65 Aligned_cols=91 Identities=20% Similarity=0.288 Sum_probs=52.3
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
+++||+|+| .|.+|+.+.+.|.... .++. +.+++.. +.... ....+...... .+.+.++|+||.|+|...
T Consensus 3 ~~~~i~iiG-~G~~G~~~a~~l~~~g-~~V~-~~~~~~~--~~~~~----~~~g~~~~~~~-~~~~~~~D~vi~~vp~~~ 72 (301)
T 3cky_A 3 KSIKIGFIG-LGAMGKPMAINLLKEG-VTVY-AFDLMEA--NVAAV----VAQGAQACENN-QKVAAASDIIFTSLPNAG 72 (301)
T ss_dssp -CCEEEEEC-CCTTHHHHHHHHHHTT-CEEE-EECSSHH--HHHHH----HTTTCEECSSH-HHHHHHCSEEEECCSSHH
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHHCC-CeEE-EEeCCHH--HHHHH----HHCCCeecCCH-HHHHhCCCEEEEECCCHH
Confidence 457999999 8999999999988653 4654 4443211 11110 00011101111 122346899999998654
Q ss_pred h-HHHH-------hhCCCCCEEEEcCCcc
Q 015441 142 T-QEII-------KGLPKSLKIVDLSADF 162 (406)
Q Consensus 142 s-~~~~-------~~l~~G~~VIDlSa~f 162 (406)
. .+.. +.+..|..|||+++-.
T Consensus 73 ~~~~v~~~~~~l~~~l~~~~~vv~~~~~~ 101 (301)
T 3cky_A 73 IVETVMNGPGGVLSACKAGTVIVDMSSVS 101 (301)
T ss_dssp HHHHHHHSTTCHHHHSCTTCEEEECCCCC
T ss_pred HHHHHHcCcchHhhcCCCCCEEEECCCCC
Confidence 3 3333 2356788999988754
No 201
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=95.57 E-value=0.028 Score=54.99 Aligned_cols=85 Identities=9% Similarity=0.203 Sum_probs=52.8
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc-h
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT-T 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~-s 142 (406)
.+|+|+| .|.+|+.+.+.|..+ .+++.........-..+... . ...++ ++.+.++|+|++|+|... +
T Consensus 138 ktvGIiG-lG~IG~~vA~~l~~~-G~~V~~~dr~~~~~~~~~~~--------~-~~~~l-~ell~~aDvV~l~lPlt~~t 205 (324)
T 3evt_A 138 QQLLIYG-TGQIGQSLAAKASAL-GMHVIGVNTTGHPADHFHET--------V-AFTAT-ADALATANFIVNALPLTPTT 205 (324)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSCCCCTTCSEE--------E-EGGGC-HHHHHHCSEEEECCCCCGGG
T ss_pred CeEEEEC-cCHHHHHHHHHHHhC-CCEEEEECCCcchhHhHhhc--------c-ccCCH-HHHHhhCCEEEEcCCCchHH
Confidence 5799999 999999999999876 46776654221111111110 0 01112 223467999999999542 2
Q ss_pred -----HHHHhhCCCCCEEEEcCC
Q 015441 143 -----QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 -----~~~~~~l~~G~~VIDlSa 160 (406)
.+....++.|..+||.|-
T Consensus 206 ~~li~~~~l~~mk~gailIN~aR 228 (324)
T 3evt_A 206 HHLFSTELFQQTKQQPMLINIGR 228 (324)
T ss_dssp TTCBSHHHHHTCCSCCEEEECSC
T ss_pred HHhcCHHHHhcCCCCCEEEEcCC
Confidence 334445677999998774
No 202
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=95.55 E-value=0.011 Score=55.41 Aligned_cols=31 Identities=26% Similarity=0.358 Sum_probs=26.0
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
++|.|.||||++|+.|++.|.+.. .+++.+.
T Consensus 13 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 43 (292)
T 1vl0_A 13 MKILITGANGQLGREIQKQLKGKN-VEVIPTD 43 (292)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSS-EEEEEEC
T ss_pred ceEEEECCCChHHHHHHHHHHhCC-CeEEecc
Confidence 689999999999999999998753 5666653
No 203
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=95.54 E-value=0.0084 Score=58.76 Aligned_cols=32 Identities=25% Similarity=0.459 Sum_probs=26.4
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
+++|.|.||||++|+.|++.|.+.. .+++.+.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~ 36 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVG-HHVRAQV 36 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEE
Confidence 3579999999999999999998643 5777665
No 204
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=95.52 E-value=0.016 Score=49.78 Aligned_cols=78 Identities=17% Similarity=0.153 Sum_probs=49.6
Q ss_pred ccEEEEECcc---cHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCC
Q 015441 63 QVRIGLLGAS---GYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 63 ~ikVaIvGAT---G~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~ 139 (406)
..+|+|+||+ |..|..+++.|.++. +++..+... ++.+. + .+.+..+ .+....+|+++.|+|.
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G-~~v~~Vnp~---~~~i~-------G--~~~y~sl-~~l~~~vDlvvi~vp~ 87 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHG-YDVYPVNPK---YEEVL-------G--RKCYPSV-LDIPDKIEVVDLFVKP 87 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEECTT---CSEET-------T--EECBSSG-GGCSSCCSEEEECSCH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCC-CEEEEECCC---CCeEC-------C--eeccCCH-HHcCCCCCEEEEEeCH
Confidence 3579999998 899999999888654 366666432 12221 1 1111111 1111368999999999
Q ss_pred cchHHHHhhC-CCCCE
Q 015441 140 GTTQEIIKGL-PKSLK 154 (406)
Q Consensus 140 ~~s~~~~~~l-~~G~~ 154 (406)
....+.+..+ ++|++
T Consensus 88 ~~~~~vv~~~~~~gi~ 103 (144)
T 2d59_A 88 KLTMEYVEQAIKKGAK 103 (144)
T ss_dssp HHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHcCCC
Confidence 8888877654 55654
No 205
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=95.50 E-value=0.0086 Score=56.38 Aligned_cols=87 Identities=17% Similarity=0.179 Sum_probs=51.5
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc-
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT- 141 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~- 141 (406)
|+||+|+| .|.+|..+.+.|.. ..++.. .+++.. +.... ......... . .+.+.++|+||.|++...
T Consensus 1 M~~i~iiG-~G~~G~~~a~~l~~--g~~V~~-~~~~~~--~~~~~----~~~g~~~~~-~-~~~~~~~D~vi~~v~~~~~ 68 (289)
T 2cvz_A 1 MEKVAFIG-LGAMGYPMAGHLAR--RFPTLV-WNRTFE--KALRH----QEEFGSEAV-P-LERVAEARVIFTCLPTTRE 68 (289)
T ss_dssp -CCEEEEC-CSTTHHHHHHHHHT--TSCEEE-ECSSTH--HHHHH----HHHHCCEEC-C-GGGGGGCSEEEECCSSHHH
T ss_pred CCeEEEEc-ccHHHHHHHHHHhC--CCeEEE-EeCCHH--HHHHH----HHCCCcccC-H-HHHHhCCCEEEEeCCChHH
Confidence 35899999 89999999999987 456644 343211 11110 000011111 1 223457899999999764
Q ss_pred hHHHHh----hCCCCCEEEEcCCc
Q 015441 142 TQEIIK----GLPKSLKIVDLSAD 161 (406)
Q Consensus 142 s~~~~~----~l~~G~~VIDlSa~ 161 (406)
..+.++ .+..|..|||.|..
T Consensus 69 ~~~v~~~l~~~l~~~~~vv~~s~~ 92 (289)
T 2cvz_A 69 VYEVAEALYPYLREGTYWVDATSG 92 (289)
T ss_dssp HHHHHHHHTTTCCTTEEEEECSCC
T ss_pred HHHHHHHHHhhCCCCCEEEECCCC
Confidence 343332 24568889998764
No 206
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=95.49 E-value=0.015 Score=56.55 Aligned_cols=33 Identities=15% Similarity=0.389 Sum_probs=27.8
Q ss_pred ccEEEEECcccHHHHHHHHHHHcC-CCceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANH-PYFGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~h-p~~elv~l~ 95 (406)
+++|.|.||||++|+.|++.|++. ...+++.+.
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~ 43 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLD 43 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEE
Confidence 468999999999999999999873 467887775
No 207
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=95.46 E-value=0.018 Score=54.03 Aligned_cols=88 Identities=14% Similarity=0.210 Sum_probs=51.8
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcchH
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQ 143 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s~ 143 (406)
+||+|+| .|.+|+.+.+.|.... .++..+ +++.. +..... .. +.......+. .+. .++|+||+|+|.....
T Consensus 1 m~i~iiG-~G~~G~~~a~~l~~~g-~~V~~~-~~~~~--~~~~~~-~~-g~~~~~~~~~-~~~-~~~D~vi~av~~~~~~ 71 (279)
T 2f1k_A 1 MKIGVVG-LGLIGASLAGDLRRRG-HYLIGV-SRQQS--TCEKAV-ER-QLVDEAGQDL-SLL-QTAKIIFLCTPIQLIL 71 (279)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEE-CSCHH--HHHHHH-HT-TSCSEEESCG-GGG-TTCSEEEECSCHHHHH
T ss_pred CEEEEEc-CcHHHHHHHHHHHHCC-CEEEEE-ECCHH--HHHHHH-hC-CCCccccCCH-HHh-CCCCEEEEECCHHHHH
Confidence 4899999 8999999999988653 365544 33211 111100 00 1000001111 122 6799999999987665
Q ss_pred HHHhh----CCCCCEEEEcCC
Q 015441 144 EIIKG----LPKSLKIVDLSA 160 (406)
Q Consensus 144 ~~~~~----l~~G~~VIDlSa 160 (406)
+.++. +..+..|||.++
T Consensus 72 ~~~~~l~~~~~~~~~vv~~~~ 92 (279)
T 2f1k_A 72 PTLEKLIPHLSPTAIVTDVAS 92 (279)
T ss_dssp HHHHHHGGGSCTTCEEEECCS
T ss_pred HHHHHHHhhCCCCCEEEECCC
Confidence 55543 456788999855
No 208
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=95.45 E-value=0.014 Score=54.28 Aligned_cols=89 Identities=11% Similarity=0.194 Sum_probs=52.7
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s 142 (406)
+||+|+| .|.+|+.+.+.|......++ .+.+++.. -+.+...+ + +....+. .+.. ++|+||+|++....
T Consensus 1 m~i~iiG-~G~mG~~~a~~l~~~g~~~v-~~~~r~~~~~~~~~~~~----g--~~~~~~~-~~~~-~~D~vi~~v~~~~~ 70 (263)
T 1yqg_A 1 MNVYFLG-GGNMAAAVAGGLVKQGGYRI-YIANRGAEKRERLEKEL----G--VETSATL-PELH-SDDVLILAVKPQDM 70 (263)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHCSCEE-EEECSSHHHHHHHHHHT----C--CEEESSC-CCCC-TTSEEEECSCHHHH
T ss_pred CEEEEEC-chHHHHHHHHHHHHCCCCeE-EEECCCHHHHHHHHHhc----C--CEEeCCH-HHHh-cCCEEEEEeCchhH
Confidence 4899999 79999999998875431344 34444321 01111100 1 1111111 2335 89999999996655
Q ss_pred HHHHhhCC-CCCEEEEcCCcc
Q 015441 143 QEIIKGLP-KSLKIVDLSADF 162 (406)
Q Consensus 143 ~~~~~~l~-~G~~VIDlSa~f 162 (406)
.+.++.+. .+..|||+++..
T Consensus 71 ~~v~~~l~~~~~ivv~~~~g~ 91 (263)
T 1yqg_A 71 EAACKNIRTNGALVLSVAAGL 91 (263)
T ss_dssp HHHHTTCCCTTCEEEECCTTC
T ss_pred HHHHHHhccCCCEEEEecCCC
Confidence 66665553 278899995544
No 209
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.44 E-value=0.033 Score=52.95 Aligned_cols=32 Identities=19% Similarity=0.391 Sum_probs=26.4
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
.++|.|.||||++|+.|++.|++.. .+++.+.
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~ 42 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEHG-YKVRGTA 42 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHCC-CEEEEEe
Confidence 3689999999999999999998764 4676664
No 210
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=95.44 E-value=0.02 Score=54.80 Aligned_cols=34 Identities=15% Similarity=0.381 Sum_probs=26.3
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
+|+++|.|.||||++|+.|++.|++.. .+++.+.
T Consensus 7 ~~~~~vlVTGatGfIG~~l~~~Ll~~G-~~V~~~~ 40 (338)
T 2rh8_A 7 IGKKTACVVGGTGFVASLLVKLLLQKG-YAVNTTV 40 (338)
T ss_dssp --CCEEEEECTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCC-CEEEEEE
Confidence 345789999999999999999988653 4666654
No 211
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=95.42 E-value=0.011 Score=56.23 Aligned_cols=32 Identities=22% Similarity=0.450 Sum_probs=26.2
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
|++|.|.||||++|+.|++.|.+.. .+++.+.
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~ 32 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEG-LSVVVVD 32 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCC-CEEEEEe
Confidence 4689999999999999999998754 5776664
No 212
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=95.42 E-value=0.017 Score=55.83 Aligned_cols=90 Identities=12% Similarity=0.235 Sum_probs=57.1
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCC--C-CCEEEEcCC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFS--N-VDAVFCCLP 138 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~--~-vDvVF~al~ 138 (406)
.+.+|+|+||||..|+.+++.|.++ .+++++....+..|+.+. + ++.+..++ +... + +|+++.++|
T Consensus 12 ~~~~vvV~Gasg~~G~~~~~~l~~~-g~~~v~~VnP~~~g~~i~-------G--~~vy~sl~-el~~~~~~~DvaIi~vp 80 (297)
T 2yv2_A 12 SETRVLVQGITGREGSFHAKAMLEY-GTKVVAGVTPGKGGSEVH-------G--VPVYDSVK-EALAEHPEINTSIVFVP 80 (297)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTTCEET-------T--EEEESSHH-HHHHHCTTCCEEEECCC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhC-CCcEEEEeCCCCCCceEC-------C--EeeeCCHH-HHhhcCCCCCEEEEecC
Confidence 3468999999999999999988876 456554444443333221 1 11121111 1111 3 899999999
Q ss_pred CcchHHHHhhC-CCCCE-EEEcCCcc
Q 015441 139 HGTTQEIIKGL-PKSLK-IVDLSADF 162 (406)
Q Consensus 139 ~~~s~~~~~~l-~~G~~-VIDlSa~f 162 (406)
.....+.+..+ ++|++ +|=.+.-|
T Consensus 81 ~~~~~~~v~ea~~~Gi~~vVi~t~G~ 106 (297)
T 2yv2_A 81 APFAPDAVYEAVDAGIRLVVVITEGI 106 (297)
T ss_dssp GGGHHHHHHHHHHTTCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 99998888764 77876 44355555
No 213
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=95.42 E-value=0.0089 Score=58.28 Aligned_cols=72 Identities=17% Similarity=0.267 Sum_probs=43.3
Q ss_pred cEEEEECcccHHHHHHHHHHHcC-CC-ceEEEEeccC-cCCccccccccCccccCCCcccc----cCcccCCCCCEEEEc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANH-PY-FGIKLMTADR-KAGQSIGSVFPHLISQDLPTMVA----VKDADFSNVDAVFCC 136 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~h-p~-~elv~l~s~~-~~G~~i~~v~p~l~~~~~~~~~~----~~~~~~~~vDvVF~a 136 (406)
+||+|+||+|+||..++.+|..+ +. .|++.+.... ..|+..+..|-.+ .. .+.. -+.+++.++|+|+++
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~---~~-~v~~~~~~~~~~~~~~aDivii~ 76 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPT---AV-KIKGFSGEDATPALEGADVVLIS 76 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCS---SE-EEEEECSSCCHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCC---Cc-eEEEecCCCcHHHhCCCCEEEEe
Confidence 48999999999999999998764 44 3666664332 2243333222111 10 1111 123457899999998
Q ss_pred CCC
Q 015441 137 LPH 139 (406)
Q Consensus 137 l~~ 139 (406)
.+.
T Consensus 77 ag~ 79 (312)
T 3hhp_A 77 AGV 79 (312)
T ss_dssp CSC
T ss_pred CCC
Confidence 863
No 214
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=95.42 E-value=0.0058 Score=56.82 Aligned_cols=93 Identities=18% Similarity=0.223 Sum_probs=52.4
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCC---ceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPY---FGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLP 138 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~---~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~ 138 (406)
|++||+|+| .|.+|+.+.+.|.+... .++. +.+++.. +.......+ + +....+. .+...++|+||+|++
T Consensus 1 M~~~i~iIG-~G~mG~~~a~~l~~~g~~~~~~V~-~~~r~~~--~~~~~~~~~-g--~~~~~~~-~e~~~~aDvVilav~ 72 (247)
T 3gt0_A 1 MDKQIGFIG-CGNMGMAMIGGMINKNIVSSNQII-CSDLNTA--NLKNASEKY-G--LTTTTDN-NEVAKNADILILSIK 72 (247)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTSSCGGGEE-EECSCHH--HHHHHHHHH-C--CEECSCH-HHHHHHCSEEEECSC
T ss_pred CCCeEEEEC-ccHHHHHHHHHHHhCCCCCCCeEE-EEeCCHH--HHHHHHHHh-C--CEEeCCh-HHHHHhCCEEEEEeC
Confidence 457899999 99999999999885432 2454 4444321 111100000 1 1101111 122357899999998
Q ss_pred CcchHHHHhhC----CCCCEEEEcCCcc
Q 015441 139 HGTTQEIIKGL----PKSLKIVDLSADF 162 (406)
Q Consensus 139 ~~~s~~~~~~l----~~G~~VIDlSa~f 162 (406)
.....+.++.+ ..+..||+.++..
T Consensus 73 ~~~~~~v~~~l~~~l~~~~~vvs~~~gi 100 (247)
T 3gt0_A 73 PDLYASIINEIKEIIKNDAIIVTIAAGK 100 (247)
T ss_dssp TTTHHHHC---CCSSCTTCEEEECSCCS
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEecCCC
Confidence 87777766543 3477788666554
No 215
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.42 E-value=0.023 Score=46.90 Aligned_cols=76 Identities=16% Similarity=0.248 Sum_probs=40.7
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCcccccccc--CccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFP--HLISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p--~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
++|+|+|+ |.+|+.+++.|.+.. .+++.+..+...-..+..-+. .+.+ +......+....+.++|+||.|++...
T Consensus 5 m~i~IiG~-G~iG~~~a~~L~~~g-~~v~~~d~~~~~~~~~~~~~~~~~~~~-d~~~~~~l~~~~~~~~d~vi~~~~~~~ 81 (140)
T 1lss_A 5 MYIIIAGI-GRVGYTLAKSLSEKG-HDIVLIDIDKDICKKASAEIDALVING-DCTKIKTLEDAGIEDADMYIAVTGKEE 81 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHCSSEEEES-CTTSHHHHHHTTTTTCSEEEECCSCHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-CeEEEEECCHHHHHHHHHhcCcEEEEc-CCCCHHHHHHcCcccCCEEEEeeCCch
Confidence 58999995 999999999998653 566655322111011110000 0111 111111111122467999999998764
Q ss_pred h
Q 015441 142 T 142 (406)
Q Consensus 142 s 142 (406)
.
T Consensus 82 ~ 82 (140)
T 1lss_A 82 V 82 (140)
T ss_dssp H
T ss_pred H
Confidence 3
No 216
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=95.39 E-value=0.0099 Score=55.68 Aligned_cols=27 Identities=30% Similarity=0.476 Sum_probs=23.2
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPY 88 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~ 88 (406)
+|++|.|.||||++|+.|++.|.+...
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~~~g~ 31 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVADGAG 31 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHHTTTC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhcCC
Confidence 356899999999999999999986543
No 217
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.39 E-value=0.0055 Score=60.50 Aligned_cols=86 Identities=9% Similarity=0.156 Sum_probs=54.1
Q ss_pred ccEEEEECcccHHHH-HHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccC--CCCCEEEEcCC
Q 015441 63 QVRIGLLGASGYTGA-EIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCCLP 138 (406)
Q Consensus 63 ~ikVaIvGATG~vG~-eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~al~ 138 (406)
++|||||| +|.+|. .++..|. +|.++++++.++... .+.+...++. ...+.++ ++.+ .++|+|+.|+|
T Consensus 26 ~irvgiiG-~G~~~~~~~~~~~~-~~~~~lvav~d~~~~~a~~~a~~~~~-----~~~~~~~-~~ll~~~~vD~V~I~tp 97 (361)
T 3u3x_A 26 ELRFAAVG-LNHNHIYGQVNCLL-RAGARLAGFHEKDDALAAEFSAVYAD-----ARRIATA-EEILEDENIGLIVSAAV 97 (361)
T ss_dssp CCEEEEEC-CCSTTHHHHHHHHH-HTTCEEEEEECSCHHHHHHHHHHSSS-----CCEESCH-HHHHTCTTCCEEEECCC
T ss_pred CcEEEEEC-cCHHHHHHHHHHhh-cCCcEEEEEEcCCHHHHHHHHHHcCC-----CcccCCH-HHHhcCCCCCEEEEeCC
Confidence 58999999 688885 5666665 589999999985431 1122221210 0111111 1111 36899999999
Q ss_pred CcchHHHHhh-CCCCCEEE
Q 015441 139 HGTTQEIIKG-LPKSLKIV 156 (406)
Q Consensus 139 ~~~s~~~~~~-l~~G~~VI 156 (406)
+..-.+++.+ +++|+.|+
T Consensus 98 ~~~H~~~~~~al~aGkhVl 116 (361)
T 3u3x_A 98 SSERAELAIRAMQHGKDVL 116 (361)
T ss_dssp HHHHHHHHHHHHHTTCEEE
T ss_pred hHHHHHHHHHHHHCCCeEE
Confidence 8877777754 68898776
No 218
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=95.35 E-value=0.024 Score=55.28 Aligned_cols=85 Identities=21% Similarity=0.408 Sum_probs=52.0
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc-h
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT-T 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~-s 142 (406)
.+|+|+| .|.+|+.+.+.|..+ .+++.........-..+.. +.+ ..++ ++.+.++|+|++++|... +
T Consensus 140 ~tvGIiG-~G~IG~~vA~~l~~~-G~~V~~~dr~~~~~~~~~~----~~~-----~~~l-~ell~~aDiV~l~~Plt~~t 207 (315)
T 3pp8_A 140 FSVGIMG-AGVLGAKVAESLQAW-GFPLRCWSRSRKSWPGVES----YVG-----REEL-RAFLNQTRVLINLLPNTAQT 207 (315)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHTT-TCCEEEEESSCCCCTTCEE----EES-----HHHH-HHHHHTCSEEEECCCCCGGG
T ss_pred CEEEEEe-eCHHHHHHHHHHHHC-CCEEEEEcCCchhhhhhhh----hcc-----cCCH-HHHHhhCCEEEEecCCchhh
Confidence 5799999 999999999999876 3577665422111011110 000 0112 223468999999999542 2
Q ss_pred -----HHHHhhCCCCCEEEEcCC
Q 015441 143 -----QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 -----~~~~~~l~~G~~VIDlSa 160 (406)
.+....++.|..+||.|-
T Consensus 208 ~~li~~~~l~~mk~gailIN~aR 230 (315)
T 3pp8_A 208 VGIINSELLDQLPDGAYVLNLAR 230 (315)
T ss_dssp TTCBSHHHHTTSCTTEEEEECSC
T ss_pred hhhccHHHHhhCCCCCEEEECCC
Confidence 333344567899998764
No 219
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=95.33 E-value=0.009 Score=55.59 Aligned_cols=93 Identities=13% Similarity=0.224 Sum_probs=54.5
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCC---c----c-----ccccccCccccCCCcccccCcccCCCC
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAG---Q----S-----IGSVFPHLISQDLPTMVAVKDADFSNV 130 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G---~----~-----i~~v~p~l~~~~~~~~~~~~~~~~~~v 130 (406)
++||+|+| +|.+|+.+.+.|.... .++... +++..- + . +......+. .. ...+. .+...++
T Consensus 19 ~~kIgiIG-~G~mG~alA~~L~~~G-~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~-~e~~~~a 91 (245)
T 3dtt_A 19 GMKIAVLG-TGTVGRTMAGALADLG-HEVTIG-TRDPKATLARAEPDAMGAPPFSQWLPEHP--HV-HLAAF-ADVAAGA 91 (245)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEE-ESCHHHHHTCC-------CCHHHHGGGST--TC-EEEEH-HHHHHHC
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCC-CEEEEE-eCChhhhhhhhhhhhhcchhhhHHHhhcC--ce-eccCH-HHHHhcC
Confidence 46899999 9999999999998653 465544 332210 0 0 111000000 00 01111 1223578
Q ss_pred CEEEEcCCCcchHHHHhhC----CCCCEEEEcCCcc
Q 015441 131 DAVFCCLPHGTTQEIIKGL----PKSLKIVDLSADF 162 (406)
Q Consensus 131 DvVF~al~~~~s~~~~~~l----~~G~~VIDlSa~f 162 (406)
|+||+|+|.....+.+..+ ..|..|||.++.+
T Consensus 92 DvVilavp~~~~~~~~~~i~~~~l~g~ivi~~s~~~ 127 (245)
T 3dtt_A 92 ELVVNATEGASSIAALTAAGAENLAGKILVDIANPL 127 (245)
T ss_dssp SEEEECSCGGGHHHHHHHHCHHHHTTSEEEECCCCE
T ss_pred CEEEEccCcHHHHHHHHHhhhhhcCCCEEEECCCCC
Confidence 9999999987665544322 1688999999765
No 220
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=95.33 E-value=0.024 Score=55.17 Aligned_cols=32 Identities=22% Similarity=0.217 Sum_probs=26.5
Q ss_pred cEEEEECcccHHHHHHHHHHHcC-CCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANH-PYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~h-p~~elv~l~ 95 (406)
++|.|.||||++|+.|++.|++. ...+++.+.
T Consensus 22 k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~ 54 (344)
T 2gn4_A 22 QTILITGGTGSFGKCFVRKVLDTTNAKKIIVYS 54 (344)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEE
Confidence 58999999999999999999876 434776664
No 221
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=95.33 E-value=0.012 Score=56.46 Aligned_cols=88 Identities=19% Similarity=0.258 Sum_probs=50.8
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccCCCCCEEEEcCCC-c
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPH-G 140 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~-~ 140 (406)
++||+|+| .|.+|+.+.+.|.... .++.. .+++.. -+.+.. .+ ....... .+.+.++|+||+|+|. .
T Consensus 30 ~~~I~iIG-~G~mG~~~a~~l~~~g-~~V~~-~~~~~~~~~~~~~-----~g--~~~~~~~-~~~~~~~DvVi~av~~~~ 98 (316)
T 2uyy_A 30 DKKIGFLG-LGLMGSGIVSNLLKMG-HTVTV-WNRTAEKCDLFIQ-----EG--ARLGRTP-AEVVSTCDITFACVSDPK 98 (316)
T ss_dssp SSCEEEEC-CSHHHHHHHHHHHHTT-CCEEE-ECSSGGGGHHHHH-----TT--CEECSCH-HHHHHHCSEEEECCSSHH
T ss_pred CCeEEEEc-ccHHHHHHHHHHHhCC-CEEEE-EeCCHHHHHHHHH-----cC--CEEcCCH-HHHHhcCCEEEEeCCCHH
Confidence 36899999 7999999999988643 35543 333221 111111 01 1001111 1223578999999994 3
Q ss_pred chHHHHh-------hCCCCCEEEEcCCc
Q 015441 141 TTQEIIK-------GLPKSLKIVDLSAD 161 (406)
Q Consensus 141 ~s~~~~~-------~l~~G~~VIDlSa~ 161 (406)
...+.+. .+..|..|||.|..
T Consensus 99 ~~~~v~~~~~~~~~~l~~~~~vv~~s~~ 126 (316)
T 2uyy_A 99 AAKDLVLGPSGVLQGIRPGKCYVDMSTV 126 (316)
T ss_dssp HHHHHHHSTTCGGGGCCTTCEEEECSCC
T ss_pred HHHHHHcCchhHhhcCCCCCEEEECCCC
Confidence 3344432 24568899998863
No 222
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=95.31 E-value=0.0081 Score=58.51 Aligned_cols=92 Identities=17% Similarity=0.153 Sum_probs=54.6
Q ss_pred ccEEEEECcccHHHHHHHHHHHc-CCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLAN-HPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~-hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
..+++|+| +|..|+..++.|.. +| ++-+.+.+++ .-+.+..-+....+.+.... +. ++...++|+||+|++...
T Consensus 121 ~~~v~iIG-aG~~a~~~~~al~~~~~-~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~-~~-~eav~~aDIVi~aT~s~~ 195 (313)
T 3hdj_A 121 SSVLGLFG-AGTQGAEHAAQLSARFA-LEAILVHDPY-ASPEILERIGRRCGVPARMA-AP-ADIAAQADIVVTATRSTT 195 (313)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHSC-CCEEEEECTT-CCHHHHHHHHHHHTSCEEEC-CH-HHHHHHCSEEEECCCCSS
T ss_pred CcEEEEEC-ccHHHHHHHHHHHHhCC-CcEEEEECCc-HHHHHHHHHHHhcCCeEEEe-CH-HHHHhhCCEEEEccCCCC
Confidence 36899999 99999999998875 56 5555566655 22222211000001111101 11 222357999999999753
Q ss_pred hHHHH--hhCCCCCEEEEcCCc
Q 015441 142 TQEII--KGLPKSLKIVDLSAD 161 (406)
Q Consensus 142 s~~~~--~~l~~G~~VIDlSa~ 161 (406)
.+. ..++.|..|+|.+++
T Consensus 196 --pvl~~~~l~~G~~V~~vGs~ 215 (313)
T 3hdj_A 196 --PLFAGQALRAGAFVGAIGSS 215 (313)
T ss_dssp --CSSCGGGCCTTCEEEECCCS
T ss_pred --cccCHHHcCCCcEEEECCCC
Confidence 222 235779999999875
No 223
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=95.31 E-value=0.016 Score=55.74 Aligned_cols=32 Identities=19% Similarity=0.239 Sum_probs=26.9
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
|++|.|.||||++|+.|++.|.+.. .+++.+.
T Consensus 21 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~ 52 (333)
T 2q1w_A 21 MKKVFITGICGQIGSHIAELLLERG-DKVVGID 52 (333)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEE
Confidence 4689999999999999999998754 5777664
No 224
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.30 E-value=0.021 Score=54.08 Aligned_cols=97 Identities=15% Similarity=0.239 Sum_probs=52.6
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC--------CccccccccCccccCCCcccccC-cccCCCCCE
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA--------GQSIGSVFPHLISQDLPTMVAVK-DADFSNVDA 132 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~--------G~~i~~v~p~l~~~~~~~~~~~~-~~~~~~vDv 132 (406)
||+||+|+| .|.+|..+...|.+.. .++..+. ++.. |..+.. .+......+......+ ...+.++|+
T Consensus 2 ~~m~i~iiG-~G~~G~~~a~~l~~~g-~~V~~~~-r~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~ 77 (316)
T 2ew2_A 2 NAMKIAIAG-AGAMGSRLGIMLHQGG-NDVTLID-QWPAHIEAIRKNGLIADF-NGEEVVANLPIFSPEEIDHQNEQVDL 77 (316)
T ss_dssp --CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEC-SCHHHHHHHHHHCEEEEE-TTEEEEECCCEECGGGCCTTSCCCSE
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHhCC-CcEEEEE-CCHHHHHHHHhCCEEEEe-CCCeeEecceeecchhhcccCCCCCE
Confidence 457999999 6999999999998643 3665543 3210 111100 0000000011000000 111237999
Q ss_pred EEEcCCCcchHHHHhh----CCCCCEEEEcCCcc
Q 015441 133 VFCCLPHGTTQEIIKG----LPKSLKIVDLSADF 162 (406)
Q Consensus 133 VF~al~~~~s~~~~~~----l~~G~~VIDlSa~f 162 (406)
||+|++.....+.++. +..+..|||++..+
T Consensus 78 vi~~v~~~~~~~v~~~l~~~l~~~~~iv~~~~g~ 111 (316)
T 2ew2_A 78 IIALTKAQQLDAMFKAIQPMITEKTYVLCLLNGL 111 (316)
T ss_dssp EEECSCHHHHHHHHHHHGGGCCTTCEEEECCSSS
T ss_pred EEEEeccccHHHHHHHHHHhcCCCCEEEEecCCC
Confidence 9999997766555543 34578899987654
No 225
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=95.29 E-value=0.011 Score=60.99 Aligned_cols=33 Identities=21% Similarity=0.533 Sum_probs=26.5
Q ss_pred CccEEEEECcccHHHHHHHHHHHcC-CCceEEEEe
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANH-PYFGIKLMT 95 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~h-p~~elv~l~ 95 (406)
||+||+|+| .|++|..+...|..+ +..+++.+.
T Consensus 8 ~~mkI~VIG-~G~vG~~~A~~La~~g~g~~V~~~D 41 (481)
T 2o3j_A 8 KVSKVVCVG-AGYVGGPTCAMIAHKCPHITVTVVD 41 (481)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEEC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEE
Confidence 457999999 999999999999864 356776663
No 226
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=95.29 E-value=0.036 Score=54.66 Aligned_cols=82 Identities=15% Similarity=0.246 Sum_probs=49.1
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc-h
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT-T 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~-s 142 (406)
.+|+|+| .|.+|+.+.+.|..+. +++.+. ++... +... .....++ ++.+.++|+|++|+|... +
T Consensus 172 ktiGIIG-lG~IG~~vA~~l~~~G-~~V~~~-dr~~~-~~~~----------~~~~~sl-~ell~~aDvVil~vP~t~~t 236 (340)
T 4dgs_A 172 KRIGVLG-LGQIGRALASRAEAFG-MSVRYW-NRSTL-SGVD----------WIAHQSP-VDLARDSDVLAVCVAASAAT 236 (340)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHTTT-CEEEEE-CSSCC-TTSC----------CEECSSH-HHHHHTCSEEEECC------
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCC-CEEEEE-cCCcc-cccC----------ceecCCH-HHHHhcCCEEEEeCCCCHHH
Confidence 5899999 9999999999998764 566544 33221 1000 0001111 223468999999999432 2
Q ss_pred -----HHHHhhCCCCCEEEEcCC
Q 015441 143 -----QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 -----~~~~~~l~~G~~VIDlSa 160 (406)
.+..+.++.|..+||.+.
T Consensus 237 ~~li~~~~l~~mk~gailIN~aR 259 (340)
T 4dgs_A 237 QNIVDASLLQALGPEGIVVNVAR 259 (340)
T ss_dssp ----CHHHHHHTTTTCEEEECSC
T ss_pred HHHhhHHHHhcCCCCCEEEECCC
Confidence 333445677899998764
No 227
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=95.25 E-value=0.025 Score=54.16 Aligned_cols=31 Identities=19% Similarity=0.383 Sum_probs=26.3
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
++|.|.||||++|+.|++.|++.. .+++.+.
T Consensus 21 ~~vlVTGasG~iG~~l~~~L~~~g-~~V~~~~ 51 (330)
T 2pzm_A 21 MRILITGGAGCLGSNLIEHWLPQG-HEILVID 51 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHGGGT-CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEE
Confidence 589999999999999999998754 5776665
No 228
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=95.24 E-value=0.021 Score=54.99 Aligned_cols=33 Identities=12% Similarity=0.215 Sum_probs=27.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCC----ceEEEEec
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPY----FGIKLMTA 96 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~----~elv~l~s 96 (406)
++|.|.||||++|+.|++.|.+... .+++.+..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r 38 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVAR 38 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeC
Confidence 4799999999999999999987542 67777653
No 229
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=95.23 E-value=0.018 Score=55.57 Aligned_cols=32 Identities=13% Similarity=0.207 Sum_probs=26.7
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
+++|.|.||||++|+.|++.|.+.. .+++.+.
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 58 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLD-QKVVGLD 58 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEe
Confidence 4689999999999999999998764 5776664
No 230
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=95.22 E-value=0.033 Score=47.61 Aligned_cols=83 Identities=19% Similarity=0.225 Sum_probs=50.7
Q ss_pred ccEEEEECcc---cHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCC
Q 015441 63 QVRIGLLGAS---GYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 63 ~ikVaIvGAT---G~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~ 139 (406)
..+|+|+|+| |..|..+++.|.+.. +++..+..+. +.+. + .+.+..+ .+....+|+|+.|+|.
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G-~~V~~vnp~~---~~i~-------G--~~~~~s~-~el~~~vDlvii~vp~ 79 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKG-FEVLPVNPNY---DEIE-------G--LKCYRSV-RELPKDVDVIVFVVPP 79 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEECTTC---SEET-------T--EECBSSG-GGSCTTCCEEEECSCH
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCC-CEEEEeCCCC---CeEC-------C--eeecCCH-HHhCCCCCEEEEEeCH
Confidence 4689999987 899999999888654 4655554321 2221 1 1111111 1112468999999998
Q ss_pred cchHHHHhhC-CCCC--EEEEcC
Q 015441 140 GTTQEIIKGL-PKSL--KIVDLS 159 (406)
Q Consensus 140 ~~s~~~~~~l-~~G~--~VIDlS 159 (406)
....+.+..+ ++|+ .+++.+
T Consensus 80 ~~v~~v~~~~~~~g~~~i~~~~~ 102 (138)
T 1y81_A 80 KVGLQVAKEAVEAGFKKLWFQPG 102 (138)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTT
T ss_pred HHHHHHHHHHHHcCCCEEEEcCc
Confidence 7777776543 4554 555443
No 231
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=95.21 E-value=0.0069 Score=59.20 Aligned_cols=33 Identities=24% Similarity=0.455 Sum_probs=25.9
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCC-ceEEEE
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPY-FGIKLM 94 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~-~elv~l 94 (406)
+++||+|+||+|++|..++..|...+. .+++.+
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~ 40 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLY 40 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEE
Confidence 457999999999999999998876543 456654
No 232
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=95.21 E-value=0.011 Score=60.62 Aligned_cols=32 Identities=22% Similarity=0.521 Sum_probs=25.4
Q ss_pred CccEEEEECcccHHHHHHHHHHHcC-CCceEEEE
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANH-PYFGIKLM 94 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~h-p~~elv~l 94 (406)
+|+||+|+| +|++|..+...|... +..+++.+
T Consensus 4 ~~mkI~VIG-~G~mG~~lA~~La~~g~G~~V~~~ 36 (467)
T 2q3e_A 4 EIKKICCIG-AGYVGGPTCSVIAHMCPEIRVTVV 36 (467)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEE
T ss_pred CccEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEE
Confidence 346999999 899999999999865 24576555
No 233
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=95.10 E-value=0.024 Score=60.21 Aligned_cols=34 Identities=18% Similarity=0.443 Sum_probs=28.7
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
++++|.|.||||++|+.|++.|.+.+..+++.+.
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~ 347 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLD 347 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEE
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEE
Confidence 4568999999999999999999876556877775
No 234
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=95.06 E-value=0.011 Score=57.76 Aligned_cols=32 Identities=22% Similarity=0.367 Sum_probs=26.3
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCc------eEEEE
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYF------GIKLM 94 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~------elv~l 94 (406)
++||+|+||+|+||..++..|...+.+ +++.+
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~ 42 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLL 42 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEE
Confidence 479999999999999999988865543 67665
No 235
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=95.06 E-value=0.015 Score=55.73 Aligned_cols=33 Identities=18% Similarity=0.287 Sum_probs=27.0
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
|+++|.|.||||++|+.|++.|++.. .+++.+.
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAG-YLPVVID 33 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 45689999999999999999998653 5676664
No 236
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=95.03 E-value=0.024 Score=54.88 Aligned_cols=75 Identities=17% Similarity=0.246 Sum_probs=42.2
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC---CccccccccC-ccccCCCcccc-cCcccCCCCCEEEEc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA---GQSIGSVFPH-LISQDLPTMVA-VKDADFSNVDAVFCC 136 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~---G~~i~~v~p~-l~~~~~~~~~~-~~~~~~~~vDvVF~a 136 (406)
|++||+|+|| |++|..++..|...+.++ +.+.+.... |...+-.+.. ....... +.. .+.+++.++|+||.+
T Consensus 1 M~~kI~VIGa-G~vG~~~a~~la~~g~~~-v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~-i~~t~d~~a~~~aD~Vi~a 77 (309)
T 1ur5_A 1 MRKKISIIGA-GFVGSTTAHWLAAKELGD-IVLLDIVEGVPQGKALDLYEASPIEGFDVR-VTGTNNYADTANSDVIVVT 77 (309)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCSE-EEEECSSSSHHHHHHHHHHTTHHHHTCCCC-EEEESCGGGGTTCSEEEEC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCe-EEEEeCCccHHHHHHHhHHHhHhhcCCCeE-EEECCCHHHHCCCCEEEEc
Confidence 4579999997 999999999998766557 455553321 1111000000 0000111 111 223457899999999
Q ss_pred CCC
Q 015441 137 LPH 139 (406)
Q Consensus 137 l~~ 139 (406)
.+.
T Consensus 78 ~g~ 80 (309)
T 1ur5_A 78 SGA 80 (309)
T ss_dssp CCC
T ss_pred CCC
Confidence 864
No 237
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=95.02 E-value=0.029 Score=48.26 Aligned_cols=82 Identities=13% Similarity=0.144 Sum_probs=50.0
Q ss_pred cEEEEECcc---cHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc
Q 015441 64 VRIGLLGAS---GYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG 140 (406)
Q Consensus 64 ikVaIvGAT---G~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~ 140 (406)
.+|+|+|++ |..|..+++.|.+.. +++..+. .+..|+.+. + .+.+..++ +....+|+|+.|+|..
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G-~~v~~vn-p~~~g~~i~-------G--~~~~~sl~-el~~~~Dlvii~vp~~ 81 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQG-YHVIPVS-PKVAGKTLL-------G--QQGYATLA-DVPEKVDMVDVFRNSE 81 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHT-CCEEEEC-SSSTTSEET-------T--EECCSSTT-TCSSCCSEEECCSCST
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCC-CEEEEeC-CcccccccC-------C--eeccCCHH-HcCCCCCEEEEEeCHH
Confidence 579999998 889999999887543 3555543 333333331 1 11111111 1124789999999988
Q ss_pred chHHHHhhC-CCCC--EEEE
Q 015441 141 TTQEIIKGL-PKSL--KIVD 157 (406)
Q Consensus 141 ~s~~~~~~l-~~G~--~VID 157 (406)
...+.+..+ ++|+ .+++
T Consensus 82 ~v~~v~~~~~~~g~~~i~i~ 101 (145)
T 2duw_A 82 AAWGVAQEAIAIGAKTLWLQ 101 (145)
T ss_dssp HHHHHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHHHHcCCCEEEEc
Confidence 777777543 4443 4554
No 238
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=94.96 E-value=0.076 Score=51.29 Aligned_cols=81 Identities=15% Similarity=0.265 Sum_probs=52.5
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc-h
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT-T 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~-s 142 (406)
.+|+|+| .|.+|+.+.+.|..+. +++... ++... .. . .. . ...+ ++.+.++|+|++|+|... +
T Consensus 125 ~~vgIIG-~G~IG~~~A~~l~~~G-~~V~~~-dr~~~-~~-~-----~~--~---~~~l-~ell~~aDvV~l~~P~~~~t 188 (303)
T 1qp8_A 125 EKVAVLG-LGEIGTRVGKILAALG-AQVRGF-SRTPK-EG-P-----WR--F---TNSL-EEALREARAAVCALPLNKHT 188 (303)
T ss_dssp CEEEEES-CSTHHHHHHHHHHHTT-CEEEEE-CSSCC-CS-S-----SC--C---BSCS-HHHHTTCSEEEECCCCSTTT
T ss_pred CEEEEEc-cCHHHHHHHHHHHHCC-CEEEEE-CCCcc-cc-C-----cc--c---CCCH-HHHHhhCCEEEEeCcCchHH
Confidence 5799999 9999999999998653 566544 33221 11 0 00 0 1111 223468999999999763 2
Q ss_pred -----HHHHhhCCCCCEEEEcCC
Q 015441 143 -----QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 -----~~~~~~l~~G~~VIDlSa 160 (406)
.+..+.++.|..+||.|.
T Consensus 189 ~~~i~~~~l~~mk~gailin~sr 211 (303)
T 1qp8_A 189 RGLVKYQHLALMAEDAVFVNVGR 211 (303)
T ss_dssp TTCBCHHHHTTSCTTCEEEECSC
T ss_pred HHHhCHHHHhhCCCCCEEEECCC
Confidence 234445677999999875
No 239
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=94.95 E-value=0.014 Score=56.54 Aligned_cols=93 Identities=10% Similarity=0.150 Sum_probs=54.1
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCC---CceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCC
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHP---YFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp---~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~ 139 (406)
++||+||| .|.+|..+.+.|.+.. ..++... +++....++.... .. + +...... .+...++|+||+|++.
T Consensus 22 ~mkI~iIG-~G~mG~ala~~L~~~G~~~~~~V~v~-~r~~~~~~~~~l~-~~-G--~~~~~~~-~e~~~~aDvVilav~~ 94 (322)
T 2izz_A 22 SMSVGFIG-AGQLAFALAKGFTAAGVLAAHKIMAS-SPDMDLATVSALR-KM-G--VKLTPHN-KETVQHSDVLFLAVKP 94 (322)
T ss_dssp CCCEEEES-CSHHHHHHHHHHHHTTSSCGGGEEEE-CSCTTSHHHHHHH-HH-T--CEEESCH-HHHHHHCSEEEECSCG
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCCcceEEEE-CCCccHHHHHHHH-Hc-C--CEEeCCh-HHHhccCCEEEEEeCH
Confidence 35899999 7999999999887543 2455443 4332111111110 00 1 1101010 1223578999999997
Q ss_pred cchHHHHhh----CCCCCEEEEcCCcc
Q 015441 140 GTTQEIIKG----LPKSLKIVDLSADF 162 (406)
Q Consensus 140 ~~s~~~~~~----l~~G~~VIDlSa~f 162 (406)
....+.++. +..+..|||+++..
T Consensus 95 ~~~~~vl~~l~~~l~~~~ivvs~s~gi 121 (322)
T 2izz_A 95 HIIPFILDEIGADIEDRHIVVSCAAGV 121 (322)
T ss_dssp GGHHHHHHHHGGGCCTTCEEEECCTTC
T ss_pred HHHHHHHHHHHhhcCCCCEEEEeCCCC
Confidence 766665543 34578999997654
No 240
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=94.94 E-value=0.036 Score=53.42 Aligned_cols=82 Identities=20% Similarity=0.254 Sum_probs=51.9
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc-h
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT-T 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~-s 142 (406)
.+|+|+| .|.+|+.+.+.|..+ .+++..+. ++.. .... .....++ ++.+.++|+|++|+|... +
T Consensus 123 ~tvGIIG-lG~IG~~vA~~l~~~-G~~V~~~d-r~~~--~~~~---------~~~~~~l-~ell~~aDiV~l~~P~t~~t 187 (290)
T 3gvx_A 123 KALGILG-YGGIGRRVAHLAKAF-GMRVIAYT-RSSV--DQNV---------DVISESP-ADLFRQSDFVLIAIPLTDKT 187 (290)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHH-TCEEEEEC-SSCC--CTTC---------SEECSSH-HHHHHHCSEEEECCCCCTTT
T ss_pred chheeec-cCchhHHHHHHHHhh-CcEEEEEe-cccc--cccc---------ccccCCh-HHHhhccCeEEEEeeccccc
Confidence 5899999 999999999999865 35776653 2211 1110 0001111 223467999999999432 2
Q ss_pred -----HHHHhhCCCCCEEEEcCC
Q 015441 143 -----QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 -----~~~~~~l~~G~~VIDlSa 160 (406)
.+..+.++.|..+||.|.
T Consensus 188 ~~li~~~~l~~mk~gailIN~aR 210 (290)
T 3gvx_A 188 RGMVNSRLLANARKNLTIVNVAR 210 (290)
T ss_dssp TTCBSHHHHTTCCTTCEEEECSC
T ss_pred hhhhhHHHHhhhhcCceEEEeeh
Confidence 344455677999998874
No 241
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=94.85 E-value=0.031 Score=53.44 Aligned_cols=33 Identities=21% Similarity=0.391 Sum_probs=26.9
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
++++|.|.||||++|+.|++.|++.. .+++.+.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~ 36 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHG-YDVVIAD 36 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCC-CcEEEEe
Confidence 44689999999999999999998763 5666654
No 242
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=94.85 E-value=0.034 Score=53.23 Aligned_cols=32 Identities=22% Similarity=0.444 Sum_probs=26.0
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCC------ceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPY------FGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~------~elv~l~ 95 (406)
++|.|.||||++|+.|++.|.+... .+++.+.
T Consensus 15 ~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~ 52 (342)
T 2hrz_A 15 MHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLID 52 (342)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEE
Confidence 5899999999999999999986542 5666654
No 243
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=94.84 E-value=0.036 Score=54.69 Aligned_cols=85 Identities=15% Similarity=0.278 Sum_probs=52.9
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc---
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG--- 140 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~--- 140 (406)
.+|+|+| .|.+|+.+.+.|..+ .+++.+.. +......... + ......+ ++.+.++|+|++++|..
T Consensus 174 ktvGIIG-lG~IG~~vA~~l~~~-G~~V~~~d-r~~~~~~~~~------g--~~~~~~l-~ell~~sDvV~l~~Plt~~T 241 (345)
T 4g2n_A 174 RRLGIFG-MGRIGRAIATRARGF-GLAIHYHN-RTRLSHALEE------G--AIYHDTL-DSLLGASDIFLIAAPGRPEL 241 (345)
T ss_dssp CEEEEES-CSHHHHHHHHHHHTT-TCEEEEEC-SSCCCHHHHT------T--CEECSSH-HHHHHTCSEEEECSCCCGGG
T ss_pred CEEEEEE-eChhHHHHHHHHHHC-CCEEEEEC-CCCcchhhhc------C--CeEeCCH-HHHHhhCCEEEEecCCCHHH
Confidence 5799999 999999999999876 36766553 3221110000 1 0001111 22346899999999953
Q ss_pred ---chHHHHhhCCCCCEEEEcCC
Q 015441 141 ---TTQEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 141 ---~s~~~~~~l~~G~~VIDlSa 160 (406)
+..+..+.++.|..+||.|-
T Consensus 242 ~~li~~~~l~~mk~gailIN~aR 264 (345)
T 4g2n_A 242 KGFLDHDRIAKIPEGAVVINISR 264 (345)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSC
T ss_pred HHHhCHHHHhhCCCCcEEEECCC
Confidence 22444555678999998763
No 244
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=94.82 E-value=0.023 Score=54.22 Aligned_cols=32 Identities=13% Similarity=0.417 Sum_probs=26.5
Q ss_pred cEEEEECcccHHHHHHHHHHHcCC-CceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHP-YFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp-~~elv~l~ 95 (406)
+||.|.||||++|+.|++.|.+.. ..+++.+.
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~ 36 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINID 36 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 479999999999999999888643 46777764
No 245
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=94.72 E-value=0.028 Score=51.87 Aligned_cols=29 Identities=34% Similarity=0.435 Sum_probs=24.8
Q ss_pred EEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 65 RIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 65 kVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
||.|.||||++|+.+++.|.+ ..+++.+.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~--g~~V~~~~ 30 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSE--RHEVIKVY 30 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTT--TSCEEEEE
T ss_pred EEEEECCCChhHHHHHHHHhc--CCeEEEec
Confidence 799999999999999999985 36777665
No 246
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=94.71 E-value=0.022 Score=55.13 Aligned_cols=92 Identities=11% Similarity=0.154 Sum_probs=52.7
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG 140 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~ 140 (406)
..++|+|+| +|..|+.+++.|.....++.+.+.++... -+.+...+ .. .+.....+ .+...++|+||+|+|..
T Consensus 134 ~~~~igiIG-~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~---~~-~~~~~~~~-~e~v~~aDiVi~atp~~ 207 (312)
T 2i99_A 134 SSEVLCILG-AGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTV---QG-EVRVCSSV-QEAVAGADVIITVTLAT 207 (312)
T ss_dssp TCCEEEEEC-CSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHS---SS-CCEECSSH-HHHHTTCSEEEECCCCS
T ss_pred CCcEEEEEC-CcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHh---hC-CeEEeCCH-HHHHhcCCEEEEEeCCC
Confidence 346899999 89999999998876423434455554321 11111111 00 01111111 12246799999999963
Q ss_pred chHHHH--hhCCCCCEEEEcCCc
Q 015441 141 TTQEII--KGLPKSLKIVDLSAD 161 (406)
Q Consensus 141 ~s~~~~--~~l~~G~~VIDlSa~ 161 (406)
..+. +.+..|..|+|.++.
T Consensus 208 --~~v~~~~~l~~g~~vi~~g~~ 228 (312)
T 2i99_A 208 --EPILFGEWVKPGAHINAVGAS 228 (312)
T ss_dssp --SCCBCGGGSCTTCEEEECCCC
T ss_pred --CcccCHHHcCCCcEEEeCCCC
Confidence 2333 345778999998664
No 247
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=94.67 E-value=0.055 Score=53.37 Aligned_cols=83 Identities=17% Similarity=0.228 Sum_probs=52.9
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc---
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG--- 140 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~--- 140 (406)
.+|+|+| .|.+|+.+.+.|..+ .+++.+.. ++. ...... . . ....+ ++.+.++|+|++|+|..
T Consensus 149 ktvgIiG-lG~IG~~vA~~l~~~-G~~V~~~d-~~~-~~~~~~------~--~-~~~~l-~ell~~aDvV~l~~Plt~~t 214 (343)
T 2yq5_A 149 LTVGLIG-VGHIGSAVAEIFSAM-GAKVIAYD-VAY-NPEFEP------F--L-TYTDF-DTVLKEADIVSLHTPLFPST 214 (343)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEC-SSC-CGGGTT------T--C-EECCH-HHHHHHCSEEEECCCCCTTT
T ss_pred CeEEEEe-cCHHHHHHHHHHhhC-CCEEEEEC-CCh-hhhhhc------c--c-cccCH-HHHHhcCCEEEEcCCCCHHH
Confidence 5799999 999999999999876 46766554 221 111110 0 0 01111 22346799999999953
Q ss_pred ---chHHHHhhCCCCCEEEEcCC
Q 015441 141 ---TTQEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 141 ---~s~~~~~~l~~G~~VIDlSa 160 (406)
+..+....++.|..+||.|.
T Consensus 215 ~~li~~~~l~~mk~gailIN~aR 237 (343)
T 2yq5_A 215 ENMIGEKQLKEMKKSAYLINCAR 237 (343)
T ss_dssp TTCBCHHHHHHSCTTCEEEECSC
T ss_pred HHHhhHHHHhhCCCCcEEEECCC
Confidence 22444555678999998774
No 248
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=94.67 E-value=0.013 Score=56.49 Aligned_cols=90 Identities=18% Similarity=0.272 Sum_probs=52.2
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
+++||+|+| .|.+|+.+.+.|.+.. .++... +++.. +... +........... .+...++|+||+|+|...
T Consensus 8 ~~~~IgiIG-~G~mG~~~A~~l~~~G-~~V~~~-dr~~~--~~~~----~~~~g~~~~~~~-~e~~~~aDvVi~~vp~~~ 77 (306)
T 3l6d_A 8 FEFDVSVIG-LGAMGTIMAQVLLKQG-KRVAIW-NRSPG--KAAA----LVAAGAHLCESV-KAALSASPATIFVLLDNH 77 (306)
T ss_dssp CSCSEEEEC-CSHHHHHHHHHHHHTT-CCEEEE-CSSHH--HHHH----HHHHTCEECSSH-HHHHHHSSEEEECCSSHH
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCC-CEEEEE-eCCHH--HHHH----HHHCCCeecCCH-HHHHhcCCEEEEEeCCHH
Confidence 456899999 9999999999988653 355444 33221 1111 000001001111 122357899999999764
Q ss_pred -hHHHHh--h---CCCCCEEEEcCCc
Q 015441 142 -TQEIIK--G---LPKSLKIVDLSAD 161 (406)
Q Consensus 142 -s~~~~~--~---l~~G~~VIDlSa~ 161 (406)
..+.+. . +..|..|||.|+.
T Consensus 78 ~~~~v~~~~~l~~~~~g~ivid~st~ 103 (306)
T 3l6d_A 78 ATHEVLGMPGVARALAHRTIVDYTTN 103 (306)
T ss_dssp HHHHHHTSTTHHHHTTTCEEEECCCC
T ss_pred HHHHHhcccchhhccCCCEEEECCCC
Confidence 333332 1 3468899999875
No 249
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=94.65 E-value=0.018 Score=56.34 Aligned_cols=87 Identities=14% Similarity=0.219 Sum_probs=52.8
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcchH
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQ 143 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s~ 143 (406)
++|+|+| .|.+|+.+.+.|.... .+++. .+++. .+..... ....+. ..+. .+.+.++|+||+|+|.....
T Consensus 17 ~~I~IIG-~G~mG~alA~~L~~~G-~~V~~-~~~~~-~~~~~~a----~~~G~~-~~~~-~e~~~~aDvVilavp~~~~~ 86 (338)
T 1np3_A 17 KKVAIIG-YGSQGHAHACNLKDSG-VDVTV-GLRSG-SATVAKA----EAHGLK-VADV-KTAVAAADVVMILTPDEFQG 86 (338)
T ss_dssp SCEEEEC-CSHHHHHHHHHHHHTT-CCEEE-ECCTT-CHHHHHH----HHTTCE-EECH-HHHHHTCSEEEECSCHHHHH
T ss_pred CEEEEEC-chHHHHHHHHHHHHCc-CEEEE-EECCh-HHHHHHH----HHCCCE-EccH-HHHHhcCCEEEEeCCcHHHH
Confidence 5799999 8999999999998653 45543 33322 1111110 000111 1111 12245799999999987776
Q ss_pred HHHh-h----CCCCCEEEEcCC
Q 015441 144 EIIK-G----LPKSLKIVDLSA 160 (406)
Q Consensus 144 ~~~~-~----l~~G~~VIDlSa 160 (406)
++++ . +..|+.|||.++
T Consensus 87 ~v~~~~i~~~l~~~~ivi~~~g 108 (338)
T 1np3_A 87 RLYKEEIEPNLKKGATLAFAHG 108 (338)
T ss_dssp HHHHHHTGGGCCTTCEEEESCC
T ss_pred HHHHHHHHhhCCCCCEEEEcCC
Confidence 6655 3 346888999876
No 250
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=94.65 E-value=0.051 Score=54.14 Aligned_cols=33 Identities=24% Similarity=0.256 Sum_probs=26.9
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
.+++|.|.||||++|+.|++.|.+. ..+++.+.
T Consensus 68 ~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~ 100 (427)
T 4f6c_A 68 PLGNTLLTGATGFLGAYLIEALQGY-SHRIYCFI 100 (427)
T ss_dssp CCEEEEEECTTSHHHHHHHHHHTTT-EEEEEEEE
T ss_pred CCCEEEEecCCcHHHHHHHHHHHcC-CCEEEEEE
Confidence 3468999999999999999999654 45777665
No 251
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=94.65 E-value=0.047 Score=52.10 Aligned_cols=32 Identities=25% Similarity=0.483 Sum_probs=26.4
Q ss_pred cEEEEECcccHHHHHHHHHHHcC--CC---ceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANH--PY---FGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~h--p~---~elv~l~ 95 (406)
|||.|.||||++|+.|++.|.+. +. .+++.+.
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~ 37 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLD 37 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEE
Confidence 37999999999999999988863 34 6777775
No 252
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=94.60 E-value=0.026 Score=54.71 Aligned_cols=31 Identities=32% Similarity=0.663 Sum_probs=24.9
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCC-ceEEEE
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPY-FGIKLM 94 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~-~elv~l 94 (406)
+||+|+||+|++|..|+..|...+. .|++.+
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~ 32 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLI 32 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEE
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEE
Confidence 4899999999999999998886544 346555
No 253
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=94.59 E-value=0.037 Score=54.74 Aligned_cols=86 Identities=16% Similarity=0.211 Sum_probs=53.0
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCcc-ccccccCccccCCCcccccCcccCCCCCEEEEcCCCc--
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQS-IGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG-- 140 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~-i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~-- 140 (406)
.+|+|+| .|.+|+.+++.|..+ .+++... ++...... ... + + .....++ ++.+.++|+|++|+|..
T Consensus 165 ktvGIIG-~G~IG~~vA~~l~~~-G~~V~~~-dr~~~~~~~~~~----~-g--~~~~~~l-~ell~~aDvV~l~~Plt~~ 233 (351)
T 3jtm_A 165 KTIGTVG-AGRIGKLLLQRLKPF-GCNLLYH-DRLQMAPELEKE----T-G--AKFVEDL-NEMLPKCDVIVINMPLTEK 233 (351)
T ss_dssp CEEEEEC-CSHHHHHHHHHHGGG-CCEEEEE-CSSCCCHHHHHH----H-C--CEECSCH-HHHGGGCSEEEECSCCCTT
T ss_pred CEEeEEE-eCHHHHHHHHHHHHC-CCEEEEe-CCCccCHHHHHh----C-C--CeEcCCH-HHHHhcCCEEEECCCCCHH
Confidence 5899999 999999999999866 3565544 33221110 000 0 0 0001111 22346899999999953
Q ss_pred ----chHHHHhhCCCCCEEEEcCC
Q 015441 141 ----TTQEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 141 ----~s~~~~~~l~~G~~VIDlSa 160 (406)
+..+..+.++.|..+||.+-
T Consensus 234 t~~li~~~~l~~mk~gailIN~aR 257 (351)
T 3jtm_A 234 TRGMFNKELIGKLKKGVLIVNNAR 257 (351)
T ss_dssp TTTCBSHHHHHHSCTTEEEEECSC
T ss_pred HHHhhcHHHHhcCCCCCEEEECcC
Confidence 23455566778999998764
No 254
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=94.59 E-value=0.024 Score=54.61 Aligned_cols=32 Identities=19% Similarity=0.411 Sum_probs=26.9
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
|||.|.||||++|+.|++.|++.+..+++.+.
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~ 32 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNID 32 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEE
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEe
Confidence 37999999999999999999875456777765
No 255
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.53 E-value=0.12 Score=49.68 Aligned_cols=108 Identities=16% Similarity=0.188 Sum_probs=59.0
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC------Cccccc-cccCccccCCCcccccCcccC-CCCCEE
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA------GQSIGS-VFPHLISQDLPTMVAVKDADF-SNVDAV 133 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~------G~~i~~-v~p~l~~~~~~~~~~~~~~~~-~~vDvV 133 (406)
|++||+|+| .|.+|..+...|.... .++..+. ++.. |..+.. .++.+.-..+... .+.++. .++|+|
T Consensus 1 M~mkI~IiG-aGaiG~~~a~~L~~~g-~~V~~~~-r~~~~~i~~~Gl~~~~~~~g~~~~~~~~~~--~~~~~~~~~~DlV 75 (320)
T 3i83_A 1 MSLNILVIG-TGAIGSFYGALLAKTG-HCVSVVS-RSDYETVKAKGIRIRSATLGDYTFRPAAVV--RSAAELETKPDCT 75 (320)
T ss_dssp --CEEEEES-CCHHHHHHHHHHHHTT-CEEEEEC-STTHHHHHHHCEEEEETTTCCEEECCSCEE--SCGGGCSSCCSEE
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHhCC-CeEEEEe-CChHHHHHhCCcEEeecCCCcEEEeeeeeE--CCHHHcCCCCCEE
Confidence 457999999 8999999999998643 3665554 3321 111111 1111110011111 122333 378999
Q ss_pred EEcCCCcchHHHHhh----CCCCCEEEEcCCcccCCCccchhhhcCC
Q 015441 134 FCCLPHGTTQEIIKG----LPKSLKIVDLSADFRLRDVSEYEEWYGQ 176 (406)
Q Consensus 134 F~al~~~~s~~~~~~----l~~G~~VIDlSa~fRl~~~~~~~~~y~~ 176 (406)
|+|++.....+.++. +..+..||.+..-+. ..+.++++++.
T Consensus 76 ilavK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~--~~~~l~~~~~~ 120 (320)
T 3i83_A 76 LLCIKVVEGADRVGLLRDAVAPDTGIVLISNGID--IEPEVAAAFPD 120 (320)
T ss_dssp EECCCCCTTCCHHHHHTTSCCTTCEEEEECSSSS--CSHHHHHHSTT
T ss_pred EEecCCCChHHHHHHHHhhcCCCCEEEEeCCCCC--hHHHHHHHCCC
Confidence 999998776555543 345677887665442 22344555443
No 256
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.53 E-value=0.058 Score=46.14 Aligned_cols=79 Identities=16% Similarity=0.237 Sum_probs=42.3
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCcccc-cc-ccCccccCCCcccccCcccCCCCCEEEEcCCCc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIG-SV-FPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG 140 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~-~v-~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~ 140 (406)
..+|+|+| .|.+|+.+++.|.... .+++.+..+...-..+. .. ...+.+ +......+....+.++|+||.|++..
T Consensus 19 ~~~v~IiG-~G~iG~~la~~L~~~g-~~V~vid~~~~~~~~~~~~~g~~~~~~-d~~~~~~l~~~~~~~ad~Vi~~~~~~ 95 (155)
T 2g1u_A 19 SKYIVIFG-CGRLGSLIANLASSSG-HSVVVVDKNEYAFHRLNSEFSGFTVVG-DAAEFETLKECGMEKADMVFAFTNDD 95 (155)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEESCGGGGGGSCTTCCSEEEES-CTTSHHHHHTTTGGGCSEEEECSSCH
T ss_pred CCcEEEEC-CCHHHHHHHHHHHhCC-CeEEEEECCHHHHHHHHhcCCCcEEEe-cCCCHHHHHHcCcccCCEEEEEeCCc
Confidence 35899999 5999999999998654 46666543221111111 00 000001 11001111111245789999999976
Q ss_pred chHH
Q 015441 141 TTQE 144 (406)
Q Consensus 141 ~s~~ 144 (406)
....
T Consensus 96 ~~~~ 99 (155)
T 2g1u_A 96 STNF 99 (155)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 257
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.51 E-value=0.058 Score=50.40 Aligned_cols=95 Identities=16% Similarity=0.166 Sum_probs=53.7
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCC-cccccCcccCCCCCEEEEcCCCcch
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLP-TMVAVKDADFSNVDAVFCCLPHGTT 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~-~~~~~~~~~~~~vDvVF~al~~~~s 142 (406)
+||+|+| .|.+|..+...|.+.. .++..+..+...-..+..... .+..+. .+...+.+...++|+||+|++....
T Consensus 1 m~i~iiG-~G~~G~~~a~~l~~~g-~~V~~~~r~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~~~ 76 (291)
T 1ks9_A 1 MKITVLG-CGALGQLWLTALCKQG-HEVQGWLRVPQPYCSVNLVET--DGSIFNESLTANDPDFLATSDLLLVTLKAWQV 76 (291)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSSCCSEEEEEEECT--TSCEEEEEEEESCHHHHHTCSEEEECSCGGGH
T ss_pred CeEEEEC-cCHHHHHHHHHHHhCC-CCEEEEEcCccceeeEEEEcC--CCceeeeeeeecCccccCCCCEEEEEecHHhH
Confidence 3899999 5999999999998643 366555322111111111100 010000 0011112233579999999998876
Q ss_pred HHHHhh----CCCCCEEEEcCCcc
Q 015441 143 QEIIKG----LPKSLKIVDLSADF 162 (406)
Q Consensus 143 ~~~~~~----l~~G~~VIDlSa~f 162 (406)
.+.++. +..+..|||++...
T Consensus 77 ~~v~~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 77 SDAVKSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp HHHHHHHHTTSCTTSCEEEECSSS
T ss_pred HHHHHHHHhhCCCCCEEEEecCCC
Confidence 665543 34577889987654
No 258
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.51 E-value=0.017 Score=47.86 Aligned_cols=31 Identities=19% Similarity=0.327 Sum_probs=23.8
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
+.+|+|+|+ |.+|+.+++.|.... .+++.+.
T Consensus 6 ~~~v~I~G~-G~iG~~~a~~l~~~g-~~v~~~d 36 (144)
T 2hmt_A 6 NKQFAVIGL-GRFGGSIVKELHRMG-HEVLAVD 36 (144)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTT-CCCEEEE
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCC-CEEEEEe
Confidence 347999997 999999999998653 4555543
No 259
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=94.50 E-value=0.015 Score=57.53 Aligned_cols=97 Identities=11% Similarity=0.107 Sum_probs=53.8
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
..+|+|+| +|..|+..++.|......+.+.+.++... .+.+...+....+......... .+...++|+|++|++...
T Consensus 129 ~~~v~iIG-aG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~-~eav~~aDiVi~aTps~~ 206 (350)
T 1x7d_A 129 ARKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSV-AEAVKGVDIITTVTADKA 206 (350)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSH-HHHHTTCSEEEECCCCSS
T ss_pred CCeEEEEC-CcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCH-HHHHhcCCEEEEeccCCC
Confidence 46899999 79999999887754223555556654321 1111111110001001001111 223468999999999863
Q ss_pred hHHHH--hhCCCCCEEEEcCCc
Q 015441 142 TQEII--KGLPKSLKIVDLSAD 161 (406)
Q Consensus 142 s~~~~--~~l~~G~~VIDlSa~ 161 (406)
...+. ..+..|..|++.++.
T Consensus 207 ~~pvl~~~~l~~G~~V~~vgs~ 228 (350)
T 1x7d_A 207 YATIITPDMLEPGMHLNAVGGD 228 (350)
T ss_dssp EEEEECGGGCCTTCEEEECSCC
T ss_pred CCceecHHHcCCCCEEEECCCC
Confidence 22232 245779999988774
No 260
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=94.47 E-value=0.05 Score=56.25 Aligned_cols=94 Identities=16% Similarity=0.186 Sum_probs=53.8
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-Cccccc-cccCccccCCCcccccCccc----CCCCCEEE
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGS-VFPHLISQDLPTMVAVKDAD----FSNVDAVF 134 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~-v~p~l~~~~~~~~~~~~~~~----~~~vDvVF 134 (406)
+|..+|+|+| .|.+|..|.+.|.++- +++... +++.. -+.+.. .++ +..+.... +..+ +.++|+||
T Consensus 8 ~~~~~IgvIG-lG~MG~~lA~~La~~G-~~V~v~-dr~~~~~~~l~~~~~~---~~gi~~~~--s~~e~v~~l~~aDvVi 79 (497)
T 2p4q_A 8 HMSADFGLIG-LAVMGQNLILNAADHG-FTVCAY-NRTQSKVDHFLANEAK---GKSIIGAT--SIEDFISKLKRPRKVM 79 (497)
T ss_dssp -CCCSEEEEC-CSHHHHHHHHHHHHTT-CCEEEE-CSSSHHHHHHHHTTTT---TSSEECCS--SHHHHHHTSCSSCEEE
T ss_pred cCCCCEEEEe-eHHHHHHHHHHHHHCC-CEEEEE-eCCHHHHHHHHccccc---CCCeEEeC--CHHHHHhcCCCCCEEE
Confidence 5667899999 9999999999998653 355444 33221 011111 000 00110011 1111 22489999
Q ss_pred EcCCCc-chHHHH----hhCCCCCEEEEcCCcc
Q 015441 135 CCLPHG-TTQEII----KGLPKSLKIVDLSADF 162 (406)
Q Consensus 135 ~al~~~-~s~~~~----~~l~~G~~VIDlSa~f 162 (406)
+|+|.+ ...+.+ +.+..|..|||.|...
T Consensus 80 l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 80 LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 999986 334433 3356788999998754
No 261
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=94.42 E-value=0.047 Score=50.61 Aligned_cols=83 Identities=14% Similarity=0.301 Sum_probs=48.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCC---ceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPY---FGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG 140 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~---~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~ 140 (406)
+||+|+| .|.+|+.+.+.|.+... .++.. .+++. .+ + + +...... .+...++|+||+|++..
T Consensus 5 m~i~iiG-~G~mG~~~a~~l~~~g~~~~~~v~~-~~~~~-~~-----~----g--~~~~~~~-~~~~~~~D~vi~~v~~~ 69 (262)
T 2rcy_A 5 IKLGFMG-LGQMGSALAHGIANANIIKKENLFY-YGPSK-KN-----T----T--LNYMSSN-EELARHCDIIVCAVKPD 69 (262)
T ss_dssp SCEEEEC-CSHHHHHHHHHHHHHTSSCGGGEEE-ECSSC-CS-----S----S--SEECSCH-HHHHHHCSEEEECSCTT
T ss_pred CEEEEEC-cCHHHHHHHHHHHHCCCCCCCeEEE-EeCCc-cc-----C----c--eEEeCCH-HHHHhcCCEEEEEeCHH
Confidence 5899999 69999999998875331 35544 34332 11 1 1 1000011 12234789999999987
Q ss_pred chHHHHhhCC---CCCEEEEcCCc
Q 015441 141 TTQEIIKGLP---KSLKIVDLSAD 161 (406)
Q Consensus 141 ~s~~~~~~l~---~G~~VIDlSa~ 161 (406)
...+.++.+. .+..||...+.
T Consensus 70 ~~~~v~~~l~~~l~~~~vv~~~~g 93 (262)
T 2rcy_A 70 IAGSVLNNIKPYLSSKLLISICGG 93 (262)
T ss_dssp THHHHHHHSGGGCTTCEEEECCSS
T ss_pred HHHHHHHHHHHhcCCCEEEEECCC
Confidence 7766665432 34445544443
No 262
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=94.41 E-value=0.022 Score=56.31 Aligned_cols=99 Identities=17% Similarity=0.336 Sum_probs=53.4
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCC------CceEEEEeccCcC--C-cccccc---c--c-CccccCCCc-ccc-cCc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHP------YFGIKLMTADRKA--G-QSIGSV---F--P-HLISQDLPT-MVA-VKD 124 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp------~~elv~l~s~~~~--G-~~i~~v---~--p-~l~~~~~~~-~~~-~~~ 124 (406)
||+||+|+| +|.+|..+...|.+.- ..++..+ +++.. + +..... . + .+.+..++. +.. .+.
T Consensus 20 ~~~kI~iIG-aG~mG~alA~~L~~~G~~~~~~~~~V~~~-~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 97 (375)
T 1yj8_A 20 GPLKISILG-SGNWASAISKVVGTNAKNNYLFENEVRMW-IRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDL 97 (375)
T ss_dssp SCBCEEEEC-CSHHHHHHHHHHHHHHHHCTTBCSCEEEE-CCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESST
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHcCCccCCCCCeEEEE-ECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCH
Confidence 457899999 8999999999887421 1345444 33221 0 011110 0 0 001111110 111 111
Q ss_pred -ccCCCCCEEEEcCCCcchHHHHhh--------CCCCCEEEEcCCcc
Q 015441 125 -ADFSNVDAVFCCLPHGTTQEIIKG--------LPKSLKIVDLSADF 162 (406)
Q Consensus 125 -~~~~~vDvVF~al~~~~s~~~~~~--------l~~G~~VIDlSa~f 162 (406)
+...++|+||+|++.....+.++. +..+..|||++.-.
T Consensus 98 ~ea~~~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi 144 (375)
T 1yj8_A 98 ASVINDADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLTKGF 144 (375)
T ss_dssp HHHHTTCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECCCSC
T ss_pred HHHHcCCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeCCcc
Confidence 224689999999997655555433 23577899988543
No 263
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.39 E-value=0.021 Score=47.87 Aligned_cols=77 Identities=16% Similarity=0.168 Sum_probs=40.9
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccc-cccCccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGS-VFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~-v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
|.+|.|+|+ |++|+.+++.|.+.. .+++.+..+...-+.+.. ....+.+ +......+......++|+||.|+|...
T Consensus 6 ~~~v~I~G~-G~iG~~la~~L~~~g-~~V~~id~~~~~~~~~~~~~~~~~~g-d~~~~~~l~~~~~~~~d~vi~~~~~~~ 82 (141)
T 3llv_A 6 RYEYIVIGS-EAAGVGLVRELTAAG-KKVLAVDKSKEKIELLEDEGFDAVIA-DPTDESFYRSLDLEGVSAVLITGSDDE 82 (141)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTT-CCEEEEESCHHHHHHHHHTTCEEEEC-CTTCHHHHHHSCCTTCSEEEECCSCHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCC-CeEEEEECCHHHHHHHHHCCCcEEEC-CCCCHHHHHhCCcccCCEEEEecCCHH
Confidence 458999995 999999999998653 466655432111011110 0000111 111111111112457999999999654
Q ss_pred h
Q 015441 142 T 142 (406)
Q Consensus 142 s 142 (406)
.
T Consensus 83 ~ 83 (141)
T 3llv_A 83 F 83 (141)
T ss_dssp H
T ss_pred H
Confidence 3
No 264
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=94.37 E-value=0.024 Score=55.17 Aligned_cols=93 Identities=13% Similarity=0.129 Sum_probs=54.6
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG 140 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~ 140 (406)
...+|+|+| +|..|+..++.|.....++.+.+.+++.. -+.+...+... +.... .... ++.. ++|+|+.||++.
T Consensus 124 ~~~~v~iIG-aG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~-~~~~~-~~~~-~e~v-~aDvVi~aTp~~ 198 (322)
T 1omo_A 124 NSSVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDR-GISAS-VQPA-EEAS-RCDVLVTTTPSR 198 (322)
T ss_dssp TCCEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHT-TCCEE-ECCH-HHHT-SSSEEEECCCCS
T ss_pred CCCEEEEEc-CcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhc-CceEE-ECCH-HHHh-CCCEEEEeeCCC
Confidence 346899999 79999999998876334566666665421 11111111000 00111 1111 2335 799999999975
Q ss_pred chHHHH--hhCCCCCEEEEcCCc
Q 015441 141 TTQEII--KGLPKSLKIVDLSAD 161 (406)
Q Consensus 141 ~s~~~~--~~l~~G~~VIDlSa~ 161 (406)
. ... ..++.|..|+|.++.
T Consensus 199 ~--pv~~~~~l~~G~~V~~ig~~ 219 (322)
T 1omo_A 199 K--PVVKAEWVEEGTHINAIGAD 219 (322)
T ss_dssp S--CCBCGGGCCTTCEEEECSCC
T ss_pred C--ceecHHHcCCCeEEEECCCC
Confidence 3 222 345779999998663
No 265
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=94.35 E-value=0.026 Score=54.42 Aligned_cols=31 Identities=19% Similarity=0.279 Sum_probs=24.6
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCC-ceEEEE
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPY-FGIKLM 94 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~-~elv~l 94 (406)
+||+|+||+|++|..|+..|..... .|++.+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~ 32 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFV 32 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEE
Confidence 4899999999999999998875443 356555
No 266
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.34 E-value=0.02 Score=55.55 Aligned_cols=31 Identities=35% Similarity=0.566 Sum_probs=25.0
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCC-ceEEEE
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPY-FGIKLM 94 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~-~elv~l 94 (406)
+||+|+||+|++|..++..|...+. .+++.+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~ 32 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLY 32 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEE
Confidence 4899999999999999999987653 355555
No 267
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=94.33 E-value=0.088 Score=51.01 Aligned_cols=81 Identities=14% Similarity=0.232 Sum_probs=51.8
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc-h
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT-T 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~-s 142 (406)
.+|+|+| .|.+|+.+.+.|..+. +++... ++... +. . . . ...+ ++.+.++|+|++|+|... +
T Consensus 145 ~~vgIIG-~G~IG~~~A~~l~~~G-~~V~~~-d~~~~-~~-~-----~---~---~~~l-~ell~~aDvV~l~~p~~~~t 207 (311)
T 2cuk_A 145 LTLGLVG-MGRIGQAVAKRALAFG-MRVVYH-ARTPK-PL-P-----Y---P---FLSL-EELLKEADVVSLHTPLTPET 207 (311)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEE-CSSCC-SS-S-----S---C---BCCH-HHHHHHCSEEEECCCCCTTT
T ss_pred CEEEEEE-ECHHHHHHHHHHHHCC-CEEEEE-CCCCc-cc-c-----c---c---cCCH-HHHHhhCCEEEEeCCCChHH
Confidence 5799999 9999999999998664 566544 33221 10 0 0 0 1111 122357899999998763 2
Q ss_pred H-----HHHhhCCCCCEEEEcCCc
Q 015441 143 Q-----EIIKGLPKSLKIVDLSAD 161 (406)
Q Consensus 143 ~-----~~~~~l~~G~~VIDlSa~ 161 (406)
. +..+.++.|..+||.|..
T Consensus 208 ~~li~~~~l~~mk~ga~lin~srg 231 (311)
T 2cuk_A 208 HRLLNRERLFAMKRGAILLNTARG 231 (311)
T ss_dssp TTCBCHHHHTTSCTTCEEEECSCG
T ss_pred HhhcCHHHHhhCCCCcEEEECCCC
Confidence 2 334445678999988763
No 268
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=94.30 E-value=0.027 Score=53.93 Aligned_cols=33 Identities=21% Similarity=0.404 Sum_probs=25.7
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
++.+|.|.||+|++|+.|++.|++.. .+++.+.
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G-~~V~~~~ 36 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERG-YTVRATV 36 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCC-CEEEEEE
Confidence 44689999999999999999988653 4666554
No 269
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=94.30 E-value=0.021 Score=55.11 Aligned_cols=88 Identities=15% Similarity=0.184 Sum_probs=51.9
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc-CCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK-AGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~-~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
|.||++|| .|..|.-+.+.|.+.- ++++.. +++. .-+.+.. .+ ....... .+...++|+||.|++...
T Consensus 3 M~kIgfIG-lG~MG~~mA~~L~~~G-~~v~v~-dr~~~~~~~l~~-----~G--a~~a~s~-~e~~~~~dvv~~~l~~~~ 71 (300)
T 3obb_A 3 MKQIAFIG-LGHMGAPMATNLLKAG-YLLNVF-DLVQSAVDGLVA-----AG--ASAARSA-RDAVQGADVVISMLPASQ 71 (300)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTT-CEEEEE-CSSHHHHHHHHH-----TT--CEECSSH-HHHHTTCSEEEECCSCHH
T ss_pred cCEEEEee-ehHHHHHHHHHHHhCC-CeEEEE-cCCHHHHHHHHH-----cC--CEEcCCH-HHHHhcCCceeecCCchH
Confidence 56999999 9999999999888642 355444 3321 1111111 01 0001111 122368999999999877
Q ss_pred hHHHH-h-------hCCCCCEEEEcCCc
Q 015441 142 TQEII-K-------GLPKSLKIVDLSAD 161 (406)
Q Consensus 142 s~~~~-~-------~l~~G~~VIDlSa~ 161 (406)
..+-+ . .+.+|..|||.|..
T Consensus 72 ~v~~V~~~~~g~~~~~~~g~iiId~sT~ 99 (300)
T 3obb_A 72 HVEGLYLDDDGLLAHIAPGTLVLECSTI 99 (300)
T ss_dssp HHHHHHHSSSSSTTSCCC-CEEEECSCC
T ss_pred HHHHHHhchhhhhhcCCCCCEEEECCCC
Confidence 64422 1 12458899999885
No 270
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=94.30 E-value=0.013 Score=57.85 Aligned_cols=91 Identities=11% Similarity=0.185 Sum_probs=53.2
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccC----CCCCEEEEc
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADF----SNVDAVFCC 136 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~----~~vDvVF~a 136 (406)
++..||+|+| .|.+|+.+.+.|.... .++... +++.. ...... .+ + .....+. .+.+ .++|+||+|
T Consensus 6 ~~~~kIgIIG-~G~mG~slA~~L~~~G-~~V~~~-dr~~~--~~~~a~-~~-G--~~~~~~~-~e~~~~a~~~aDlVila 75 (341)
T 3ktd_A 6 DISRPVCILG-LGLIGGSLLRDLHAAN-HSVFGY-NRSRS--GAKSAV-DE-G--FDVSADL-EATLQRAAAEDALIVLA 75 (341)
T ss_dssp CCSSCEEEEC-CSHHHHHHHHHHHHTT-CCEEEE-CSCHH--HHHHHH-HT-T--CCEESCH-HHHHHHHHHTTCEEEEC
T ss_pred CCCCEEEEEe-ecHHHHHHHHHHHHCC-CEEEEE-eCCHH--HHHHHH-Hc-C--CeeeCCH-HHHHHhcccCCCEEEEe
Confidence 3446899999 8999999999998653 455544 33221 111100 00 1 0001111 1111 257999999
Q ss_pred CCCcchHHHHhh---CCCCCEEEEcCCc
Q 015441 137 LPHGTTQEIIKG---LPKSLKIVDLSAD 161 (406)
Q Consensus 137 l~~~~s~~~~~~---l~~G~~VIDlSa~ 161 (406)
+|.....+.++. +..|+.|+|.++.
T Consensus 76 vP~~~~~~vl~~l~~~~~~~iv~Dv~Sv 103 (341)
T 3ktd_A 76 VPMTAIDSLLDAVHTHAPNNGFTDVVSV 103 (341)
T ss_dssp SCHHHHHHHHHHHHHHCTTCCEEECCSC
T ss_pred CCHHHHHHHHHHHHccCCCCEEEEcCCC
Confidence 997766555543 2468899999875
No 271
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=94.27 E-value=0.061 Score=55.04 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=27.4
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
..+++|.|.||||++|+.|++.|.. ...+++++.
T Consensus 148 ~~~~~VLVTGatG~iG~~l~~~L~~-~g~~V~~l~ 181 (508)
T 4f6l_B 148 RPLGNTLLTGATGFLGAYLIEALQG-YSHRIYCFI 181 (508)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHTBT-TEEEEEEEE
T ss_pred CCCCeEEEECCccchHHHHHHHHHh-cCCEEEEEE
Confidence 3457899999999999999999954 346777775
No 272
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=94.23 E-value=0.058 Score=55.64 Aligned_cols=95 Identities=13% Similarity=0.138 Sum_probs=53.5
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccC--cccCCCCCEEEEcCCC
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVK--DADFSNVDAVFCCLPH 139 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~--~~~~~~vDvVF~al~~ 139 (406)
|++|+|+| .|.+|..|.+.|.++- +++... +++.. -+.+.... ..+..+.....+. ...+.++|+||+|+|.
T Consensus 4 ~~kIgiIG-lG~MG~~lA~~L~~~G-~~V~v~-dr~~~~~~~l~~~g--~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~ 78 (484)
T 4gwg_A 4 QADIALIG-LAVMGQNLILNMNDHG-FVVCAF-NRTVSKVDDFLANE--AKGTKVVGAQSLKEMVSKLKKPRRIILLVKA 78 (484)
T ss_dssp CBSEEEEC-CSHHHHHHHHHHHHTT-CCEEEE-CSSTHHHHHHHHTT--TTTSSCEECSSHHHHHHTBCSSCEEEECSCS
T ss_pred CCEEEEEC-hhHHHHHHHHHHHHCC-CEEEEE-eCCHHHHHHHHhcc--cCCCceeccCCHHHHHhhccCCCEEEEecCC
Confidence 46899999 8999999999998764 355544 33221 01111000 0010110001110 0112368999999998
Q ss_pred cc-hHHH----HhhCCCCCEEEEcCCcc
Q 015441 140 GT-TQEI----IKGLPKSLKIVDLSADF 162 (406)
Q Consensus 140 ~~-s~~~----~~~l~~G~~VIDlSa~f 162 (406)
+. ..+. .+.+..|..|||.|...
T Consensus 79 ~~~v~~vl~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 79 GQAVDDFIEKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp SHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred hHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 73 3333 34456789999998764
No 273
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=94.23 E-value=0.06 Score=52.86 Aligned_cols=85 Identities=12% Similarity=0.198 Sum_probs=52.9
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch-
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT- 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s- 142 (406)
.+|+|+| .|.+|+.+.+.|..+. +++..+. ++. .+..... + +.. ..++ ++.+.++|+|++|+|....
T Consensus 166 ~tvgIIG-lG~IG~~vA~~l~~~G-~~V~~~d-~~~-~~~~~~~---~-g~~---~~~l-~ell~~aDvV~l~~P~t~~t 233 (335)
T 2g76_A 166 KTLGILG-LGRIGREVATRMQSFG-MKTIGYD-PII-SPEVSAS---F-GVQ---QLPL-EEIWPLCDFITVHTPLLPST 233 (335)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHTTT-CEEEEEC-SSS-CHHHHHH---T-TCE---ECCH-HHHGGGCSEEEECCCCCTTT
T ss_pred CEEEEEe-ECHHHHHHHHHHHHCC-CEEEEEC-CCc-chhhhhh---c-Cce---eCCH-HHHHhcCCEEEEecCCCHHH
Confidence 5799999 9999999999998764 6765553 221 1110000 0 101 1111 2234689999999997642
Q ss_pred -----HHHHhhCCCCCEEEEcCC
Q 015441 143 -----QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 -----~~~~~~l~~G~~VIDlSa 160 (406)
.+..+.++.|..+||.|.
T Consensus 234 ~~li~~~~l~~mk~gailIN~ar 256 (335)
T 2g76_A 234 TGLLNDNTFAQCKKGVRVVNCAR 256 (335)
T ss_dssp TTSBCHHHHTTSCTTEEEEECSC
T ss_pred HHhhCHHHHhhCCCCcEEEECCC
Confidence 334445677899998875
No 274
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=94.22 E-value=0.054 Score=53.87 Aligned_cols=85 Identities=15% Similarity=0.261 Sum_probs=52.6
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch-
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT- 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s- 142 (406)
.+|+|+| .|.+|+.+.+.|..+ .+++.+.. +......... .+.. ...+ ++.+.++|+|++++|....
T Consensus 177 ktvGIIG-lG~IG~~vA~~l~~f-G~~V~~~d-~~~~~~~~~~-----~g~~---~~~l-~ell~~aDvV~l~~Plt~~T 244 (365)
T 4hy3_A 177 SEIGIVG-FGDLGKALRRVLSGF-RARIRVFD-PWLPRSMLEE-----NGVE---PASL-EDVLTKSDFIFVVAAVTSEN 244 (365)
T ss_dssp SEEEEEC-CSHHHHHHHHHHTTS-CCEEEEEC-SSSCHHHHHH-----TTCE---ECCH-HHHHHSCSEEEECSCSSCC-
T ss_pred CEEEEec-CCcccHHHHHhhhhC-CCEEEEEC-CCCCHHHHhh-----cCee---eCCH-HHHHhcCCEEEEcCcCCHHH
Confidence 5899999 999999999999866 36766553 3211000000 0100 1111 2234689999999996532
Q ss_pred -----HHHHhhCCCCCEEEEcCC
Q 015441 143 -----QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 -----~~~~~~l~~G~~VIDlSa 160 (406)
.+....++.|..+||.|-
T Consensus 245 ~~li~~~~l~~mk~gailIN~aR 267 (365)
T 4hy3_A 245 KRFLGAEAFSSMRRGAAFILLSR 267 (365)
T ss_dssp --CCCHHHHHTSCTTCEEEECSC
T ss_pred HhhcCHHHHhcCCCCcEEEECcC
Confidence 344455678999998763
No 275
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=94.21 E-value=0.032 Score=52.09 Aligned_cols=69 Identities=10% Similarity=0.251 Sum_probs=48.3
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT 142 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s 142 (406)
++||+|+| .|.+|..|.+.|.+.. .+++.+... ++..++| |+|+|....
T Consensus 6 ~mkI~IIG-~G~~G~sLA~~L~~~G-~~V~~~~~~---------------------------~~~~~aD--ilavP~~ai 54 (232)
T 3dfu_A 6 RLRVGIFD-DGSSTVNMAEKLDSVG-HYVTVLHAP---------------------------EDIRDFE--LVVIDAHGV 54 (232)
T ss_dssp CCEEEEEC-CSCCCSCHHHHHHHTT-CEEEECSSG---------------------------GGGGGCS--EEEECSSCH
T ss_pred CcEEEEEe-eCHHHHHHHHHHHHCC-CEEEEecCH---------------------------HHhccCC--EEEEcHHHH
Confidence 46999999 8999999999998653 355544320 0123467 888888766
Q ss_pred HHHHhh----CCCCCEEEEcCCcc
Q 015441 143 QEIIKG----LPKSLKIVDLSADF 162 (406)
Q Consensus 143 ~~~~~~----l~~G~~VIDlSa~f 162 (406)
.+.++. +..|..|||.|+..
T Consensus 55 ~~vl~~l~~~l~~g~ivvd~sgs~ 78 (232)
T 3dfu_A 55 EGYVEKLSAFARRGQMFLHTSLTH 78 (232)
T ss_dssp HHHHHHHHTTCCTTCEEEECCSSC
T ss_pred HHHHHHHHHhcCCCCEEEEECCcC
Confidence 665543 35688999998764
No 276
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=94.21 E-value=0.058 Score=50.18 Aligned_cols=69 Identities=16% Similarity=0.208 Sum_probs=51.1
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT 142 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s 142 (406)
-+|-.|+||+|..|+.+.++. ..+.+++++..++.. + .++.++|+++..+-+..+
T Consensus 12 ~~~~~v~Ga~GrMG~~i~~~~-~~~~~elv~~id~~~---------------~---------~~l~~~DVvIDFT~P~a~ 66 (228)
T 1vm6_A 12 HMKYGIVGYSGRMGQEIQKVF-SEKGHELVLKVDVNG---------------V---------EELDSPDVVIDFSSPEAL 66 (228)
T ss_dssp CCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEEETTE---------------E---------EECSCCSEEEECSCGGGH
T ss_pred cceeEEEEecCHHHHHHHHHH-hCCCCEEEEEEcCCC---------------c---------ccccCCCEEEECCCHHHH
Confidence 468999999999999998865 567889988875421 0 112357999977777777
Q ss_pred HHHHhhC-CCCCEEE
Q 015441 143 QEIIKGL-PKSLKIV 156 (406)
Q Consensus 143 ~~~~~~l-~~G~~VI 156 (406)
.+.++.+ +.|+.+|
T Consensus 67 ~~~~~~~~~~g~~~V 81 (228)
T 1vm6_A 67 PKTVDLCKKYRAGLV 81 (228)
T ss_dssp HHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHcCCCEE
Confidence 7877764 6788655
No 277
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.21 E-value=0.036 Score=54.75 Aligned_cols=98 Identities=17% Similarity=0.209 Sum_probs=55.3
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-Cccccccc--c-CccccCCCc-ccc-cCc-ccCCCCCEEE
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVF--P-HLISQDLPT-MVA-VKD-ADFSNVDAVF 134 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~--p-~l~~~~~~~-~~~-~~~-~~~~~vDvVF 134 (406)
+++||+|+| .|.+|..+...|.+.- .++... +++.. -+.+...+ + .+.+..++. +.. .+. +...++|+||
T Consensus 28 ~~mkI~VIG-aG~mG~alA~~La~~G-~~V~l~-~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVi 104 (356)
T 3k96_A 28 FKHPIAILG-AGSWGTALALVLARKG-QKVRLW-SYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDIL 104 (356)
T ss_dssp CCSCEEEEC-CSHHHHHHHHHHHTTT-CCEEEE-CSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEE
T ss_pred cCCeEEEEC-ccHHHHHHHHHHHHCC-CeEEEE-eCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEE
Confidence 457999999 7999999999998643 344444 33211 01111100 0 011111111 111 111 2346899999
Q ss_pred EcCCCcchHHHHhh----CCCCCEEEEcCCcc
Q 015441 135 CCLPHGTTQEIIKG----LPKSLKIVDLSADF 162 (406)
Q Consensus 135 ~al~~~~s~~~~~~----l~~G~~VIDlSa~f 162 (406)
+|+|.....+.++. +..+..||+++.-+
T Consensus 105 laVp~~~~~~vl~~i~~~l~~~~ivvs~~kGi 136 (356)
T 3k96_A 105 IVVPSFAFHEVITRMKPLIDAKTRIAWGTKGL 136 (356)
T ss_dssp ECCCHHHHHHHHHHHGGGCCTTCEEEECCCSC
T ss_pred ECCCHHHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 99998765555543 45678899887644
No 278
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.14 E-value=0.046 Score=52.91 Aligned_cols=94 Identities=13% Similarity=0.069 Sum_probs=52.6
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-Ccccccccc-CccccCCC---cc--cccCc-ccCCCCCEEEE
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFP-HLISQDLP---TM--VAVKD-ADFSNVDAVFC 135 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p-~l~~~~~~---~~--~~~~~-~~~~~vDvVF~ 135 (406)
+||+|+| .|.+|..+...|.... .++..+ +++.. -+.+..... .+.+.... .+ ...+. +.+.++|+||.
T Consensus 5 mki~iiG-~G~~G~~~a~~L~~~g-~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~ 81 (359)
T 1bg6_A 5 KTYAVLG-LGNGGHAFAAYLALKG-QSVLAW-DIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI 81 (359)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEE-CSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred CeEEEEC-CCHHHHHHHHHHHhCC-CEEEEE-eCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEE
Confidence 6999999 6999999999988653 455544 33211 011111000 00000000 00 01111 12468999999
Q ss_pred cCCCcchHHHHhh----CCCCCEEEEcCC
Q 015441 136 CLPHGTTQEIIKG----LPKSLKIVDLSA 160 (406)
Q Consensus 136 al~~~~s~~~~~~----l~~G~~VIDlSa 160 (406)
|++.....+.++. +..+..||+..+
T Consensus 82 ~v~~~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 82 VVPAIHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp CSCGGGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred eCCchHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 9998877665543 456788888755
No 279
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=94.09 E-value=0.066 Score=51.11 Aligned_cols=89 Identities=15% Similarity=0.307 Sum_probs=53.7
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch-
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT- 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s- 142 (406)
.+|+|+| .|.+|+.+++.|..+. +++.... ++.. +..... .+ +........+ ++.+.++|+|+.|+|...-
T Consensus 156 ~~v~IiG-~G~iG~~~a~~l~~~G-~~V~~~d-r~~~--~~~~~~-~~-g~~~~~~~~l-~~~l~~aDvVi~~~p~~~i~ 227 (293)
T 3d4o_A 156 ANVAVLG-LGRVGMSVARKFAALG-AKVKVGA-RESD--LLARIA-EM-GMEPFHISKA-AQELRDVDVCINTIPALVVT 227 (293)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEE-SSHH--HHHHHH-HT-TSEEEEGGGH-HHHTTTCSEEEECCSSCCBC
T ss_pred CEEEEEe-eCHHHHHHHHHHHhCC-CEEEEEE-CCHH--HHHHHH-HC-CCeecChhhH-HHHhcCCCEEEECCChHHhC
Confidence 5899999 8999999999998765 4665543 3211 111000 01 1000001111 2234689999999997553
Q ss_pred HHHHhhCCCCCEEEEcCC
Q 015441 143 QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 ~~~~~~l~~G~~VIDlSa 160 (406)
.+....++.|..+||.+.
T Consensus 228 ~~~l~~mk~~~~lin~ar 245 (293)
T 3d4o_A 228 ANVLAEMPSHTFVIDLAS 245 (293)
T ss_dssp HHHHHHSCTTCEEEECSS
T ss_pred HHHHHhcCCCCEEEEecC
Confidence 444556677899999874
No 280
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=94.08 E-value=0.043 Score=52.13 Aligned_cols=103 Identities=16% Similarity=0.171 Sum_probs=59.4
Q ss_pred ccEEEEECcccHHHHHHHHHHHcC--CCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANH--PYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG 140 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~h--p~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~ 140 (406)
++||+|+| .|.+|+.+++.|.+. +..++. +.+++.. +.......+ .+....+. .+...++|+||+|++..
T Consensus 3 ~~~I~iIG-~G~mG~aia~~l~~~g~~~~~V~-v~dr~~~--~~~~l~~~~---gi~~~~~~-~~~~~~aDvVilav~p~ 74 (280)
T 3tri_A 3 TSNITFIG-GGNMARNIVVGLIANGYDPNRIC-VTNRSLD--KLDFFKEKC---GVHTTQDN-RQGALNADVVVLAVKPH 74 (280)
T ss_dssp CSCEEEES-CSHHHHHHHHHHHHTTCCGGGEE-EECSSSH--HHHHHHHTT---CCEEESCH-HHHHSSCSEEEECSCGG
T ss_pred CCEEEEEc-ccHHHHHHHHHHHHCCCCCCeEE-EEeCCHH--HHHHHHHHc---CCEEeCCh-HHHHhcCCeEEEEeCHH
Confidence 36899999 699999999988854 323554 4443321 111110000 11111111 22346899999999887
Q ss_pred chHHHHhh-----CCCCCEEEEcCCcccCCCccchhhhcCC
Q 015441 141 TTQEIIKG-----LPKSLKIVDLSADFRLRDVSEYEEWYGQ 176 (406)
Q Consensus 141 ~s~~~~~~-----l~~G~~VIDlSa~fRl~~~~~~~~~y~~ 176 (406)
...+.++. +..+..||++++.... +..++|.+.
T Consensus 75 ~~~~vl~~l~~~~l~~~~iiiS~~agi~~---~~l~~~l~~ 112 (280)
T 3tri_A 75 QIKMVCEELKDILSETKILVISLAVGVTT---PLIEKWLGK 112 (280)
T ss_dssp GHHHHHHHHHHHHHTTTCEEEECCTTCCH---HHHHHHHTC
T ss_pred HHHHHHHHHHhhccCCCeEEEEecCCCCH---HHHHHHcCC
Confidence 66665543 3456688887776543 445667654
No 281
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=94.07 E-value=0.029 Score=55.38 Aligned_cols=32 Identities=28% Similarity=0.564 Sum_probs=25.6
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCC------ceEEEE
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPY------FGIKLM 94 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~------~elv~l 94 (406)
.+||+|+||+|.||+.|+-+|...+- .||+.+
T Consensus 24 ~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~ 61 (345)
T 4h7p_A 24 AVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLL 61 (345)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEE
T ss_pred CCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEE
Confidence 47999999999999999998876443 356555
No 282
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=94.07 E-value=0.074 Score=51.67 Aligned_cols=74 Identities=19% Similarity=0.340 Sum_probs=41.1
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCc-eEEEEeccCc---CCcc--ccccccCccccCCCcccccCcccCCCCCEEEE
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYF-GIKLMTADRK---AGQS--IGSVFPHLISQDLPTMVAVKDADFSNVDAVFC 135 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~-elv~l~s~~~---~G~~--i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~ 135 (406)
+++||+|+|| |++|..++-.|.....+ |++.+ +... .|.. +....+.+ .+.. +..-+.+++.++|+||.
T Consensus 6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~-Di~~~~~~g~~~dl~~~~~~~--~~~~-i~~~~~~a~~~aDvVii 80 (318)
T 1y6j_A 6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLI-DVFKEKAIGEAMDINHGLPFM--GQMS-LYAGDYSDVKDCDVIVV 80 (318)
T ss_dssp -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEE-CCC---CCHHHHHHTTSCCCT--TCEE-EC--CGGGGTTCSEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEE-eCChHHHHHHHHHHHHhHHhc--CCeE-EEECCHHHhCCCCEEEE
Confidence 3579999997 99999999988865543 55555 3221 1211 11111111 1111 11112445789999999
Q ss_pred cCCCc
Q 015441 136 CLPHG 140 (406)
Q Consensus 136 al~~~ 140 (406)
+.+..
T Consensus 81 ~~g~p 85 (318)
T 1y6j_A 81 TAGAN 85 (318)
T ss_dssp CCCC-
T ss_pred cCCCC
Confidence 98753
No 283
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=94.04 E-value=0.091 Score=48.98 Aligned_cols=32 Identities=22% Similarity=0.300 Sum_probs=25.6
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEec
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTA 96 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s 96 (406)
|+||.|.| +|++|+.|++.|.+.. .+++.+..
T Consensus 3 ~~~ilVtG-aG~iG~~l~~~L~~~g-~~V~~~~r 34 (286)
T 3gpi_A 3 LSKILIAG-CGDLGLELARRLTAQG-HEVTGLRR 34 (286)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 35899999 5999999999998753 47777753
No 284
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=94.04 E-value=0.038 Score=52.29 Aligned_cols=34 Identities=15% Similarity=0.274 Sum_probs=26.3
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
.++++|.|.||||++|+.|++.|.+.. .+++.+.
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~ 43 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQN-VEVFGTS 43 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCC-CEEEEEe
Confidence 345789999999999999999998754 4777664
No 285
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=94.00 E-value=0.065 Score=52.85 Aligned_cols=86 Identities=12% Similarity=0.173 Sum_probs=52.0
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc-h
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT-T 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~-s 142 (406)
.+|+|+| .|.+|+.+.+.|..+. +++... ++... +..... + +.. ....+ ++.+.++|+|++|+|... +
T Consensus 169 ~tvGIIG-~G~IG~~vA~~l~~~G-~~V~~~-d~~~~-~~~~~~---~-g~~--~~~~l-~ell~~aDvV~l~~P~t~~t 237 (347)
T 1mx3_A 169 ETLGIIG-LGRVGQAVALRAKAFG-FNVLFY-DPYLS-DGVERA---L-GLQ--RVSTL-QDLLFHSDCVTLHCGLNEHN 237 (347)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHTTT-CEEEEE-CTTSC-TTHHHH---H-TCE--ECSSH-HHHHHHCSEEEECCCCCTTC
T ss_pred CEEEEEe-ECHHHHHHHHHHHHCC-CEEEEE-CCCcc-hhhHhh---c-CCe--ecCCH-HHHHhcCCEEEEcCCCCHHH
Confidence 5799999 9999999999998764 576554 33221 111100 0 100 01111 122357899999998642 2
Q ss_pred -----HHHHhhCCCCCEEEEcCC
Q 015441 143 -----QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 -----~~~~~~l~~G~~VIDlSa 160 (406)
.+..+.++.|..+||.|.
T Consensus 238 ~~li~~~~l~~mk~gailIN~ar 260 (347)
T 1mx3_A 238 HHLINDFTVKQMRQGAFLVNTAR 260 (347)
T ss_dssp TTSBSHHHHTTSCTTEEEEECSC
T ss_pred HHHhHHHHHhcCCCCCEEEECCC
Confidence 334445567889998764
No 286
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=94.00 E-value=0.095 Score=51.35 Aligned_cols=83 Identities=19% Similarity=0.244 Sum_probs=51.3
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc-h
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT-T 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~-s 142 (406)
.+|+|+| .|.+|+.+.+.|..+. +++... +++.. + .. + .....++ ++.+.++|+|++|+|... +
T Consensus 165 ~~vgIIG-~G~iG~~vA~~l~~~G-~~V~~~-dr~~~-~-~~-------g--~~~~~~l-~ell~~aDvVil~vP~~~~t 229 (333)
T 3ba1_A 165 KRVGIIG-LGRIGLAVAERAEAFD-CPISYF-SRSKK-P-NT-------N--YTYYGSV-VELASNSDILVVACPLTPET 229 (333)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHTTT-CCEEEE-CSSCC-T-TC-------C--SEEESCH-HHHHHTCSEEEECSCCCGGG
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCC-CEEEEE-CCCch-h-cc-------C--ceecCCH-HHHHhcCCEEEEecCCChHH
Confidence 4799999 8999999999998653 566544 33221 1 00 0 0001111 122468999999999753 3
Q ss_pred H-----HHHhhCCCCCEEEEcCCc
Q 015441 143 Q-----EIIKGLPKSLKIVDLSAD 161 (406)
Q Consensus 143 ~-----~~~~~l~~G~~VIDlSa~ 161 (406)
+ +..+.++.|..+||.|.-
T Consensus 230 ~~li~~~~l~~mk~gailIn~srG 253 (333)
T 3ba1_A 230 THIINREVIDALGPKGVLINIGRG 253 (333)
T ss_dssp TTCBCHHHHHHHCTTCEEEECSCG
T ss_pred HHHhhHHHHhcCCCCCEEEECCCC
Confidence 2 333445678899987754
No 287
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.94 E-value=0.033 Score=57.29 Aligned_cols=30 Identities=20% Similarity=0.294 Sum_probs=24.2
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEE
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLM 94 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l 94 (406)
.+||+|+| +||+|..+...|++.- .+++.+
T Consensus 8 ~~~I~VIG-~G~vG~~lA~~la~~G-~~V~~~ 37 (478)
T 2y0c_A 8 SMNLTIIG-SGSVGLVTGACLADIG-HDVFCL 37 (478)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CceEEEEC-cCHHHHHHHHHHHhCC-CEEEEE
Confidence 47999999 9999999999998643 355555
No 288
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=93.93 E-value=0.073 Score=50.93 Aligned_cols=89 Identities=18% Similarity=0.279 Sum_probs=53.4
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch-
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT- 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s- 142 (406)
.+|+|+| .|.+|+.+++.|..+. +++..+. ++.. +..... .+ +........+ ++.+.++|+|+.|+|...-
T Consensus 158 ~~v~IiG-~G~iG~~~a~~l~~~G-~~V~~~d-~~~~--~~~~~~-~~-g~~~~~~~~l-~~~l~~aDvVi~~~p~~~i~ 229 (300)
T 2rir_A 158 SQVAVLG-LGRTGMTIARTFAALG-ANVKVGA-RSSA--HLARIT-EM-GLVPFHTDEL-KEHVKDIDICINTIPSMILN 229 (300)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEE-SSHH--HHHHHH-HT-TCEEEEGGGH-HHHSTTCSEEEECCSSCCBC
T ss_pred CEEEEEc-ccHHHHHHHHHHHHCC-CEEEEEE-CCHH--HHHHHH-HC-CCeEEchhhH-HHHhhCCCEEEECCChhhhC
Confidence 5899999 7999999999998765 4665553 3221 111000 00 1000001111 2235689999999997543
Q ss_pred HHHHhhCCCCCEEEEcCC
Q 015441 143 QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 ~~~~~~l~~G~~VIDlSa 160 (406)
.+....++.|..+||.+.
T Consensus 230 ~~~~~~mk~g~~lin~a~ 247 (300)
T 2rir_A 230 QTVLSSMTPKTLILDLAS 247 (300)
T ss_dssp HHHHTTSCTTCEEEECSS
T ss_pred HHHHHhCCCCCEEEEEeC
Confidence 344455677899999875
No 289
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=93.92 E-value=0.039 Score=47.20 Aligned_cols=79 Identities=13% Similarity=0.113 Sum_probs=48.3
Q ss_pred ccEEEEECcc---cHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCC
Q 015441 63 QVRIGLLGAS---GYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 63 ~ikVaIvGAT---G~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~ 139 (406)
..+|+|+||| |..|..+++.|.++. +++..++-+ ..++.+. + .+.+..+ .+.-..+|+++.|+|.
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G-~~v~~vnp~-~~~~~i~-------G--~~~~~sl-~el~~~vDlavi~vp~ 80 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQG-YRVLPVNPR-FQGEELF-------G--EEAVASL-LDLKEPVDILDVFRPP 80 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTT-CEEEEECGG-GTTSEET-------T--EECBSSG-GGCCSCCSEEEECSCH
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCC-CEEEEeCCC-cccCcCC-------C--EEecCCH-HHCCCCCCEEEEEeCH
Confidence 3579999998 899999999888654 465555432 2233321 1 1111111 1111368999999998
Q ss_pred cchHHHHhhC-CCCC
Q 015441 140 GTTQEIIKGL-PKSL 153 (406)
Q Consensus 140 ~~s~~~~~~l-~~G~ 153 (406)
....+.+..+ ++|+
T Consensus 81 ~~~~~v~~~~~~~gi 95 (140)
T 1iuk_A 81 SALMDHLPEVLALRP 95 (140)
T ss_dssp HHHTTTHHHHHHHCC
T ss_pred HHHHHHHHHHHHcCC
Confidence 7777766543 4444
No 290
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=93.88 E-value=0.034 Score=54.99 Aligned_cols=86 Identities=14% Similarity=0.157 Sum_probs=52.4
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc-h
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT-T 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~-s 142 (406)
.+|+|+| .|.+|+.+.+.|..+. +++..+. ++..-..... .+ ......+ ++.+.++|+|++|+|... +
T Consensus 161 ~tvGIIG-lG~IG~~vA~~l~~~G-~~V~~~d-~~~~~~~~~~-----~g--~~~~~~l-~ell~~aDiV~l~~Plt~~t 229 (352)
T 3gg9_A 161 QTLGIFG-YGKIGQLVAGYGRAFG-MNVLVWG-RENSKERARA-----DG--FAVAESK-DALFEQSDVLSVHLRLNDET 229 (352)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEC-SHHHHHHHHH-----TT--CEECSSH-HHHHHHCSEEEECCCCSTTT
T ss_pred CEEEEEe-ECHHHHHHHHHHHhCC-CEEEEEC-CCCCHHHHHh-----cC--ceEeCCH-HHHHhhCCEEEEeccCcHHH
Confidence 5899999 9999999999998763 6776653 2210000000 01 0001111 223467999999998543 2
Q ss_pred -----HHHHhhCCCCCEEEEcCC
Q 015441 143 -----QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 -----~~~~~~l~~G~~VIDlSa 160 (406)
.+..+.++.|..+||.|.
T Consensus 230 ~~li~~~~l~~mk~gailIN~aR 252 (352)
T 3gg9_A 230 RSIITVADLTRMKPTALFVNTSR 252 (352)
T ss_dssp TTCBCHHHHTTSCTTCEEEECSC
T ss_pred HHhhCHHHHhhCCCCcEEEECCC
Confidence 344455677999998874
No 291
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=93.86 E-value=0.047 Score=53.02 Aligned_cols=98 Identities=17% Similarity=0.263 Sum_probs=54.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCC------CceEEEEeccCcC------Cccccccc--cC-ccccCCCc-ccc-cCc-c
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHP------YFGIKLMTADRKA------GQSIGSVF--PH-LISQDLPT-MVA-VKD-A 125 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp------~~elv~l~s~~~~------G~~i~~v~--p~-l~~~~~~~-~~~-~~~-~ 125 (406)
+||+|+| .|.+|..+...|.... ..++..+ +++.. .+.+...+ +. +.+..++. +.. .+. +
T Consensus 9 mkI~iIG-~G~mG~~~a~~l~~~g~~~~~~~~~V~~~-~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (354)
T 1x0v_A 9 KKVCIVG-SGNWGSAIAKIVGGNAAQLAQFDPRVTMW-VFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQ 86 (354)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHHHHHCTTEEEEEEEE-CCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHH
T ss_pred CeEEEEC-CCHHHHHHHHHHHhcCCcccCCCCeEEEE-EcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHH
Confidence 5899999 8999999999887432 1355444 33221 11111100 00 00111110 111 111 2
Q ss_pred cCCCCCEEEEcCCCcchHHHHhh----CCCCCEEEEcCCccc
Q 015441 126 DFSNVDAVFCCLPHGTTQEIIKG----LPKSLKIVDLSADFR 163 (406)
Q Consensus 126 ~~~~vDvVF~al~~~~s~~~~~~----l~~G~~VIDlSa~fR 163 (406)
...++|+||+|++.....+.++. +..+..|||++.-.-
T Consensus 87 ~~~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 87 AAEDADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp HHTTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred HHcCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 24689999999998766665543 345788999886543
No 292
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=93.84 E-value=0.028 Score=53.10 Aligned_cols=31 Identities=29% Similarity=0.307 Sum_probs=25.5
Q ss_pred EEEEECcccHHHHHHHHHHHcC-CCceEEEEe
Q 015441 65 RIGLLGASGYTGAEIVRLLANH-PYFGIKLMT 95 (406)
Q Consensus 65 kVaIvGATG~vG~eLlrlL~~h-p~~elv~l~ 95 (406)
||.|.||||++|+.|++.|.+. +..+++.+.
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~ 32 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASD 32 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEec
Confidence 5899999999999999988865 446776664
No 293
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=93.81 E-value=0.052 Score=52.85 Aligned_cols=87 Identities=18% Similarity=0.247 Sum_probs=52.1
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc-h
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT-T 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~-s 142 (406)
.+|+|+| .|.+|+.+++.|..+. +++..+. +.+....... .+ + .....++ ++.+.++|+|++|+|... +
T Consensus 147 ~~vgIIG-~G~IG~~~A~~l~~~G-~~V~~~d-~~~~~~~~~~---~~-g--~~~~~~l-~ell~~aDvVil~~p~~~~t 216 (320)
T 1gdh_A 147 KTLGIYG-FGSIGQALAKRAQGFD-MDIDYFD-THRASSSDEA---SY-Q--ATFHDSL-DSLLSVSQFFSLNAPSTPET 216 (320)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHTTT-CEEEEEC-SSCCCHHHHH---HH-T--CEECSSH-HHHHHHCSEEEECCCCCTTT
T ss_pred CEEEEEC-cCHHHHHHHHHHHHCC-CEEEEEC-CCCcChhhhh---hc-C--cEEcCCH-HHHHhhCCEEEEeccCchHH
Confidence 5799999 9999999999998764 6765553 3011111000 00 1 0001011 122357899999999653 2
Q ss_pred -----HHHHhhCCCCCEEEEcCC
Q 015441 143 -----QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 -----~~~~~~l~~G~~VIDlSa 160 (406)
.+..+.++.|..+||.+.
T Consensus 217 ~~~i~~~~l~~mk~gailIn~ar 239 (320)
T 1gdh_A 217 RYFFNKATIKSLPQGAIVVNTAR 239 (320)
T ss_dssp TTCBSHHHHTTSCTTEEEEECSC
T ss_pred HhhcCHHHHhhCCCCcEEEECCC
Confidence 233445667889998875
No 294
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=93.81 E-value=0.018 Score=54.89 Aligned_cols=97 Identities=15% Similarity=0.242 Sum_probs=54.5
Q ss_pred ccCCccEEEEECcccHHHHHHHHHHHcC-----CCceEEEEeccCc--------CCccccccccCcccc--CCCcccc-c
Q 015441 59 KSEKQVRIGLLGASGYTGAEIVRLLANH-----PYFGIKLMTADRK--------AGQSIGSVFPHLISQ--DLPTMVA-V 122 (406)
Q Consensus 59 ~~~~~ikVaIvGATG~vG~eLlrlL~~h-----p~~elv~l~s~~~--------~G~~i~~v~p~l~~~--~~~~~~~-~ 122 (406)
++++++||+|+| .|.+|..+...|.+. ...++..+. +.. .|..+.. ..+. ..+ +.. .
T Consensus 4 m~~~~m~I~iiG-~G~mG~~~a~~L~~~~~~~~g~~~V~~~~-r~~~~~~l~~~~g~~~~~----~~~~~~~~~-~~~~~ 76 (317)
T 2qyt_A 4 MNQQPIKIAVFG-LGGVGGYYGAMLALRAAATDGLLEVSWIA-RGAHLEAIRAAGGLRVVT----PSRDFLARP-TCVTD 76 (317)
T ss_dssp ---CCEEEEEEC-CSHHHHHHHHHHHHHHHHTTSSEEEEEEC-CHHHHHHHHHHTSEEEEC----SSCEEEECC-SEEES
T ss_pred CCCCCCEEEEEC-cCHHHHHHHHHHHhCccccCCCCCEEEEE-cHHHHHHHHhcCCeEEEe----CCCCeEEec-ceEec
Confidence 445567999999 999999999988754 214665553 321 1111110 0000 000 000 1
Q ss_pred CcccCCCCCEEEEcCCCcchHHHHhhC----CCCCEEEEcCCcc
Q 015441 123 KDADFSNVDAVFCCLPHGTTQEIIKGL----PKSLKIVDLSADF 162 (406)
Q Consensus 123 ~~~~~~~vDvVF~al~~~~s~~~~~~l----~~G~~VIDlSa~f 162 (406)
+.+...++|+||+|++.....+.++.+ ..+..||+++.-.
T Consensus 77 ~~~~~~~~D~vil~vk~~~~~~v~~~i~~~l~~~~~iv~~~nG~ 120 (317)
T 2qyt_A 77 NPAEVGTVDYILFCTKDYDMERGVAEIRPMIGQNTKILPLLNGA 120 (317)
T ss_dssp CHHHHCCEEEEEECCSSSCHHHHHHHHGGGEEEEEEEEECSCSS
T ss_pred CccccCCCCEEEEecCcccHHHHHHHHHhhcCCCCEEEEccCCC
Confidence 112235789999999988776665443 3466788876654
No 295
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.79 E-value=0.13 Score=52.35 Aligned_cols=97 Identities=22% Similarity=0.268 Sum_probs=53.1
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccc-----cccCccc---c--CCCccc-ccCc-ccCCCC
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGS-----VFPHLIS---Q--DLPTMV-AVKD-ADFSNV 130 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~-----v~p~l~~---~--~~~~~~-~~~~-~~~~~v 130 (406)
..||+|+| +||+|.-+...|++.- .+++.+.-+...=..+.. ..|.+.. . .-..+. ..+. +...++
T Consensus 8 ~~~~~vIG-lG~vG~~~A~~La~~G-~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~a 85 (446)
T 4a7p_A 8 SVRIAMIG-TGYVGLVSGACFSDFG-HEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDA 85 (446)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTC
T ss_pred ceEEEEEc-CCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcC
Confidence 47999999 9999999999998652 466555322111011111 0111110 0 000011 1122 234689
Q ss_pred CEEEEcCCCcc-----------hH----HHHhhCCCCCEEEEcCCc
Q 015441 131 DAVFCCLPHGT-----------TQ----EIIKGLPKSLKIVDLSAD 161 (406)
Q Consensus 131 DvVF~al~~~~-----------s~----~~~~~l~~G~~VIDlSa~ 161 (406)
|++|.|.|+.. -. .+.+.+..|..||+.|.-
T Consensus 86 Dvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv 131 (446)
T 4a7p_A 86 DAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTV 131 (446)
T ss_dssp SEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCC
T ss_pred CEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 99999976543 12 223345678899998864
No 296
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=93.77 E-value=0.071 Score=51.97 Aligned_cols=85 Identities=15% Similarity=0.262 Sum_probs=51.3
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCC-ccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAG-QSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G-~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s 142 (406)
++|+|+| .|.+|+.+.+.|..+. +++..+. ++... ..... + + .. ...+ ++.+.++|+|++|+|....
T Consensus 156 ~~vgIIG-~G~iG~~iA~~l~~~G-~~V~~~d-~~~~~~~~~~~----~-g--~~-~~~l-~e~l~~aDvVi~~vp~~~~ 223 (330)
T 2gcg_A 156 STVGIIG-LGRIGQAIARRLKPFG-VQRFLYT-GRQPRPEEAAE----F-Q--AE-FVST-PELAAQSDFIVVACSLTPA 223 (330)
T ss_dssp CEEEEEC-CSHHHHHHHHHHGGGT-CCEEEEE-SSSCCHHHHHT----T-T--CE-ECCH-HHHHHHCSEEEECCCCCTT
T ss_pred CEEEEEC-cCHHHHHHHHHHHHCC-CEEEEEC-CCCcchhHHHh----c-C--ce-eCCH-HHHHhhCCEEEEeCCCChH
Confidence 5899999 7999999999998653 4665443 32211 11110 0 1 10 0111 1224578999999986532
Q ss_pred ------HHHHhhCCCCCEEEEcCC
Q 015441 143 ------QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 ------~~~~~~l~~G~~VIDlSa 160 (406)
.+..+.++.|..+|+.|.
T Consensus 224 t~~~i~~~~~~~mk~gailIn~sr 247 (330)
T 2gcg_A 224 TEGLCNKDFFQKMKETAVFINISR 247 (330)
T ss_dssp TTTCBSHHHHHHSCTTCEEEECSC
T ss_pred HHHhhCHHHHhcCCCCcEEEECCC
Confidence 334455677889998765
No 297
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=93.76 E-value=0.065 Score=53.38 Aligned_cols=38 Identities=24% Similarity=0.539 Sum_probs=33.7
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCC-ceEEEEec-cCcC
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPY-FGIKLMTA-DRKA 100 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~-~elv~l~s-~~~~ 100 (406)
|.||.|+|+||-||.+-++.+.+||+ +++++++. .+..
T Consensus 21 mk~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aLaa~g~nv 60 (398)
T 2y1e_A 21 RLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHL 60 (398)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTTEEEEEEEECSSCH
T ss_pred ceEEEEEccCcHHHHHHHHHHHhCCCceEEEEEEecCCCH
Confidence 57899999999999999999999987 89999987 5543
No 298
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=93.74 E-value=0.064 Score=53.65 Aligned_cols=82 Identities=20% Similarity=0.274 Sum_probs=52.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch-
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT- 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s- 142 (406)
.+|+|+| .|.+|+.+.+.|..+ .+++......+.. ... +.. ...+ ++.+.++|+|++++|....
T Consensus 120 ktvGIIG-lG~IG~~vA~~l~a~-G~~V~~~d~~~~~---~~~------~~~---~~sl-~ell~~aDiV~l~~Plt~~g 184 (381)
T 3oet_A 120 RTIGIVG-VGNVGSRLQTRLEAL-GIRTLLCDPPRAA---RGD------EGD---FRTL-DELVQEADVLTFHTPLYKDG 184 (381)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECHHHHH---TTC------CSC---BCCH-HHHHHHCSEEEECCCCCCSS
T ss_pred CEEEEEe-ECHHHHHHHHHHHHC-CCEEEEECCChHH---hcc------Ccc---cCCH-HHHHhhCCEEEEcCcCCccc
Confidence 5799999 999999999999876 3676655321110 000 001 1111 2234579999999985432
Q ss_pred ---------HHHHhhCCCCCEEEEcCC
Q 015441 143 ---------QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 ---------~~~~~~l~~G~~VIDlSa 160 (406)
.+....++.|..+||.|-
T Consensus 185 ~~~T~~li~~~~l~~mk~gailIN~aR 211 (381)
T 3oet_A 185 PYKTLHLADETLIRRLKPGAILINACR 211 (381)
T ss_dssp TTCCTTSBCHHHHHHSCTTEEEEECSC
T ss_pred cccchhhcCHHHHhcCCCCcEEEECCC
Confidence 344555678999998764
No 299
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.73 E-value=0.12 Score=49.69 Aligned_cols=96 Identities=16% Similarity=0.201 Sum_probs=52.9
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc------CCccccccccCccccCCCcccccCcccCCCCCEEEE
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK------AGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFC 135 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~------~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~ 135 (406)
|++||+|+| .|.+|..+...|.... .++..+. ++. .|..+...++.+.-..+... .+.+...++|+||+
T Consensus 1 M~mkI~IiG-aGaiG~~~a~~L~~~g-~~V~~~~-r~~~~~i~~~g~~~~~~~g~~~~~~~~~~--~~~~~~~~~D~vil 75 (312)
T 3hn2_A 1 MSLRIAIVG-AGALGLYYGALLQRSG-EDVHFLL-RRDYEAIAGNGLKVFSINGDFTLPHVKGY--RAPEEIGPMDLVLV 75 (312)
T ss_dssp ---CEEEEC-CSTTHHHHHHHHHHTS-CCEEEEC-STTHHHHHHTCEEEEETTCCEEESCCCEE--SCHHHHCCCSEEEE
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHCC-CeEEEEE-cCcHHHHHhCCCEEEcCCCeEEEeeceee--cCHHHcCCCCEEEE
Confidence 457999999 8999999999998542 3555554 332 12111111111100011101 11223457899999
Q ss_pred cCCCcchHHHHhh----CCCCCEEEEcCCcc
Q 015441 136 CLPHGTTQEIIKG----LPKSLKIVDLSADF 162 (406)
Q Consensus 136 al~~~~s~~~~~~----l~~G~~VIDlSa~f 162 (406)
|++.....+.++. +..+..||.+..-+
T Consensus 76 avk~~~~~~~l~~l~~~l~~~~~iv~l~nGi 106 (312)
T 3hn2_A 76 GLKTFANSRYEELIRPLVEEGTQILTLQNGL 106 (312)
T ss_dssp CCCGGGGGGHHHHHGGGCCTTCEEEECCSSS
T ss_pred ecCCCCcHHHHHHHHhhcCCCCEEEEecCCC
Confidence 9998776665543 44567788766544
No 300
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=93.67 E-value=0.042 Score=55.54 Aligned_cols=29 Identities=28% Similarity=0.450 Sum_probs=23.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEE
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLM 94 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l 94 (406)
+||+|+| +|++|..+...|.+.. .+++.+
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~G-~~V~~~ 29 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSARG-HEVIGV 29 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCC-CEEEEE
Confidence 3899999 8999999999998653 355554
No 301
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=93.64 E-value=0.061 Score=52.77 Aligned_cols=84 Identities=12% Similarity=0.202 Sum_probs=52.9
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc---
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG--- 140 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~--- 140 (406)
.+|+|+| .|.+|+.+.+.|..+. +++.... ++. ...... . +.. ...+ ++.+.++|+|++|+|..
T Consensus 142 ~tvgIiG-~G~IG~~vA~~l~~~G-~~V~~~d-~~~-~~~~~~----~-g~~---~~~l-~ell~~aDvV~l~~P~t~~t 208 (334)
T 2pi1_A 142 LTLGVIG-TGRIGSRVAMYGLAFG-MKVLCYD-VVK-REDLKE----K-GCV---YTSL-DELLKESDVISLHVPYTKET 208 (334)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEC-SSC-CHHHHH----T-TCE---ECCH-HHHHHHCSEEEECCCCCTTT
T ss_pred ceEEEEC-cCHHHHHHHHHHHHCc-CEEEEEC-CCc-chhhHh----c-Cce---ecCH-HHHHhhCCEEEEeCCCChHH
Confidence 5799999 9999999999998763 6766553 221 111100 0 100 1111 22346799999999953
Q ss_pred ---chHHHHhhCCCCCEEEEcCC
Q 015441 141 ---TTQEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 141 ---~s~~~~~~l~~G~~VIDlSa 160 (406)
+..+..+.++.|+.+||.|-
T Consensus 209 ~~li~~~~l~~mk~gailIN~aR 231 (334)
T 2pi1_A 209 HHMINEERISLMKDGVYLINTAR 231 (334)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSC
T ss_pred HHhhCHHHHhhCCCCcEEEECCC
Confidence 22444555678999998774
No 302
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=93.62 E-value=0.12 Score=50.56 Aligned_cols=83 Identities=11% Similarity=0.185 Sum_probs=52.7
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch-
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT- 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s- 142 (406)
.+|+|+| .|.+|+.+.+.|..+. +++.++. ++.. +.... + . ....+ ++.+.++|+|++|+|....
T Consensus 146 ~~vgIiG-~G~IG~~~A~~l~~~G-~~V~~~d-~~~~-~~~~~----~----~-~~~~l-~ell~~aDvV~~~~P~~~~t 211 (333)
T 1dxy_A 146 QTVGVMG-TGHIGQVAIKLFKGFG-AKVIAYD-PYPM-KGDHP----D----F-DYVSL-EDLFKQSDVIDLHVPGIEQN 211 (333)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEC-SSCC-SSCCT----T----C-EECCH-HHHHHHCSEEEECCCCCGGG
T ss_pred CEEEEEC-cCHHHHHHHHHHHHCC-CEEEEEC-CCcc-hhhHh----c----c-ccCCH-HHHHhcCCEEEEcCCCchhH
Confidence 5799999 9999999999998663 6765553 2221 11110 0 0 01111 2234579999999996542
Q ss_pred -----HHHHhhCCCCCEEEEcCC
Q 015441 143 -----QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 -----~~~~~~l~~G~~VIDlSa 160 (406)
.+..+.++.|..+||.|.
T Consensus 212 ~~li~~~~l~~mk~ga~lIn~sr 234 (333)
T 1dxy_A 212 THIINEAAFNLMKPGAIVINTAR 234 (333)
T ss_dssp TTSBCHHHHHHSCTTEEEEECSC
T ss_pred HHHhCHHHHhhCCCCcEEEECCC
Confidence 344455678999998764
No 303
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.61 E-value=0.036 Score=54.83 Aligned_cols=93 Identities=16% Similarity=0.262 Sum_probs=51.0
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccC-ccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPH-LISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~-l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
.+|+|+|+ |.+|+.+++.+..... +++.+. ++.. -..+.+.+.. +.. +......+ .+.+.++|+||.|++...
T Consensus 167 ~~V~ViGa-G~iG~~~a~~l~~~Ga-~V~~~d-~~~~~~~~~~~~~g~~~~~-~~~~~~~l-~~~~~~~DvVi~~~g~~~ 241 (369)
T 2eez_A 167 ASVVILGG-GTVGTNAAKIALGMGA-QVTILD-VNHKRLQYLDDVFGGRVIT-LTATEANI-KKSVQHADLLIGAVLVPG 241 (369)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-EEEEEE-SCHHHHHHHHHHTTTSEEE-EECCHHHH-HHHHHHCSEEEECCC---
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-EEEEEE-CCHHHHHHHHHhcCceEEE-ecCCHHHH-HHHHhCCCEEEECCCCCc
Confidence 58999997 9999999999987654 665543 3211 0011110000 000 00000111 112357899999998543
Q ss_pred -------hHHHHhhCCCCCEEEEcCCc
Q 015441 142 -------TQEIIKGLPKSLKIVDLSAD 161 (406)
Q Consensus 142 -------s~~~~~~l~~G~~VIDlSa~ 161 (406)
.++..+.+..|.++||.+.+
T Consensus 242 ~~~~~li~~~~l~~mk~gg~iV~v~~~ 268 (369)
T 2eez_A 242 AKAPKLVTRDMLSLMKEGAVIVDVAVD 268 (369)
T ss_dssp ----CCSCHHHHTTSCTTCEEEECC--
T ss_pred cccchhHHHHHHHhhcCCCEEEEEecC
Confidence 45556666778899999865
No 304
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=93.61 E-value=0.063 Score=53.37 Aligned_cols=97 Identities=15% Similarity=0.169 Sum_probs=53.3
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEec--cCc---------CCcccccccc-C--cc-ccCCCcccccCc-c
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTA--DRK---------AGQSIGSVFP-H--LI-SQDLPTMVAVKD-A 125 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s--~~~---------~G~~i~~v~p-~--l~-~~~~~~~~~~~~-~ 125 (406)
||+||+|+| .|.+|..+...|......++..+.. ++. .|..+...++ . .. ...+... ..+. +
T Consensus 1 ~~mkI~ViG-aG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 78 (404)
T 3c7a_A 1 MTVKVCVCG-GGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVI-TKDPEI 78 (404)
T ss_dssp -CEEEEEEC-CSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEE-ESCHHH
T ss_pred CCceEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEE-eCCHHH
Confidence 457999999 6999999999997543456665540 210 0100010000 0 00 0001001 1111 2
Q ss_pred cCCCCCEEEEcCCCcchHHHHhh----CCCCCEEEEcCC
Q 015441 126 DFSNVDAVFCCLPHGTTQEIIKG----LPKSLKIVDLSA 160 (406)
Q Consensus 126 ~~~~vDvVF~al~~~~s~~~~~~----l~~G~~VIDlSa 160 (406)
...++|+||+|++.....+.++. +..+..||++.+
T Consensus 79 a~~~aD~Vilav~~~~~~~v~~~l~~~l~~~~ivv~~~~ 117 (404)
T 3c7a_A 79 AISGADVVILTVPAFAHEGYFQAMAPYVQDSALIVGLPS 117 (404)
T ss_dssp HHTTCSEEEECSCGGGHHHHHHHHTTTCCTTCEEEETTC
T ss_pred HhCCCCEEEEeCchHHHHHHHHHHHhhCCCCcEEEEcCC
Confidence 24689999999998877666654 345778888543
No 305
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=93.60 E-value=0.12 Score=50.56 Aligned_cols=82 Identities=15% Similarity=0.195 Sum_probs=51.8
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc-h
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT-T 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~-s 142 (406)
.+|+|+| .|.+|+.+.+.|..+ .+++..+. ++.. +.... + . ....+ ++.+.++|+|++|+|... +
T Consensus 147 ~~vgIiG-~G~IG~~~A~~l~~~-G~~V~~~d-~~~~-~~~~~----~----~-~~~~l-~ell~~aDvV~~~~p~t~~t 212 (331)
T 1xdw_A 147 CTVGVVG-LGRIGRVAAQIFHGM-GATVIGED-VFEI-KGIED----Y----C-TQVSL-DEVLEKSDIITIHAPYIKEN 212 (331)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEC-SSCC-CSCTT----T----C-EECCH-HHHHHHCSEEEECCCCCTTT
T ss_pred CEEEEEC-cCHHHHHHHHHHHHC-CCEEEEEC-CCcc-HHHHh----c----c-ccCCH-HHHHhhCCEEEEecCCchHH
Confidence 5799999 899999999999865 36765543 3221 11110 0 0 01111 123457899999998642 2
Q ss_pred -----HHHHhhCCCCCEEEEcC
Q 015441 143 -----QEIIKGLPKSLKIVDLS 159 (406)
Q Consensus 143 -----~~~~~~l~~G~~VIDlS 159 (406)
.+..+.++.|..+||.|
T Consensus 213 ~~li~~~~l~~mk~ga~lin~s 234 (331)
T 1xdw_A 213 GAVVTRDFLKKMKDGAILVNCA 234 (331)
T ss_dssp CCSBCHHHHHTSCTTEEEEECS
T ss_pred HHHhCHHHHhhCCCCcEEEECC
Confidence 34455567899999887
No 306
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=93.58 E-value=0.044 Score=55.91 Aligned_cols=92 Identities=18% Similarity=0.311 Sum_probs=50.4
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccc--cCCCcccccCcccCCCCCEEEEcCCCc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLIS--QDLPTMVAVKDADFSNVDAVFCCLPHG 140 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~--~~~~~~~~~~~~~~~~vDvVF~al~~~ 140 (406)
.+|+|+| +|.+|+.+++.|.+.. .+++ +.+++.. .+.+...++.+.. .++.....+ ...+.++|+|+.|+|..
T Consensus 4 k~VlViG-aG~iG~~ia~~L~~~G-~~V~-v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l-~~~l~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 4 KSVLMLG-SGFVTRPTLDVLTDSG-IKVT-VACRTLESAKKLSAGVQHSTPISLDVNDDAAL-DAEVAKHDLVISLIPYT 79 (450)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHTTT-CEEE-EEESSHHHHHHTTTTCTTEEEEECCTTCHHHH-HHHHTTSSEEEECCC--
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCc-CEEE-EEECCHHHHHHHHHhcCCceEEEeecCCHHHH-HHHHcCCcEEEECCccc
Confidence 5899999 8999999999998644 5644 4444321 1111111110000 011111111 11235899999999976
Q ss_pred chHHHHhh-CCCCCEEEEcC
Q 015441 141 TTQEIIKG-LPKSLKIVDLS 159 (406)
Q Consensus 141 ~s~~~~~~-l~~G~~VIDlS 159 (406)
....+... +.+|..|+|.+
T Consensus 80 ~~~~i~~a~l~~g~~vvd~~ 99 (450)
T 1ff9_A 80 FHATVIKSAIRQKKHVVTTS 99 (450)
T ss_dssp CHHHHHHHHHHHTCEEEESS
T ss_pred cchHHHHHHHhCCCeEEEee
Confidence 55444443 45678888874
No 307
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=93.57 E-value=0.041 Score=56.14 Aligned_cols=35 Identities=20% Similarity=0.174 Sum_probs=28.7
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCC--CceEEEEe
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHP--YFGIKLMT 95 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp--~~elv~l~ 95 (406)
.++++|.|.||||++|++|++.|++.+ ..+++.+.
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~ 107 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLV 107 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEE
Confidence 445799999999999999999888653 36777775
No 308
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=93.56 E-value=0.056 Score=52.09 Aligned_cols=31 Identities=19% Similarity=0.253 Sum_probs=26.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
++|.|.||||++|+.|++.|.++. .+++.+.
T Consensus 10 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 40 (357)
T 1rkx_A 10 KRVFVTGHTGFKGGWLSLWLQTMG-ATVKGYS 40 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHhCC-CeEEEEe
Confidence 589999999999999999998764 4776665
No 309
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=93.52 E-value=0.052 Score=52.41 Aligned_cols=32 Identities=25% Similarity=0.423 Sum_probs=26.0
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
++|.|.||||++|+.|++.|.+....+++.+.
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~ 78 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVD 78 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence 57999999999999999999876535676664
No 310
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=93.51 E-value=0.022 Score=56.29 Aligned_cols=74 Identities=11% Similarity=0.130 Sum_probs=40.2
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCC-ceEEEEeccC--cCCccccccccCccccCCCcccccC-cccCCCCCEEEEcCC
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPY-FGIKLMTADR--KAGQSIGSVFPHLISQDLPTMVAVK-DADFSNVDAVFCCLP 138 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~-~elv~l~s~~--~~G~~i~~v~p~l~~~~~~~~~~~~-~~~~~~vDvVF~al~ 138 (406)
+.||+|+||+|+||..++..|..... -|++.+--.. -.|...+-.+..+....+. . ..+ .+++.++|+||.+.+
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~-~-t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLT-F-TSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCE-E-ESCHHHHHTTEEEEEECCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceE-E-cCCHHHHhCCCCEEEEccC
Confidence 36899999999999999987765443 2565553211 1221111111111111111 1 112 234679999999976
No 311
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=93.50 E-value=0.046 Score=56.01 Aligned_cols=91 Identities=10% Similarity=0.153 Sum_probs=52.0
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCccc----CCCCCEEEEcCC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDAD----FSNVDAVFCCLP 138 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~----~~~vDvVF~al~ 138 (406)
+||+|+| .|.+|+.+.+.|.++. .++. +.+++.. -..+...++ +..+.... +.++ +.++|+||+|+|
T Consensus 6 ~~IgvIG-~G~mG~~lA~~L~~~G-~~V~-v~dr~~~~~~~l~~~~~---~~gi~~~~--s~~e~v~~l~~aDvVilavp 77 (474)
T 2iz1_A 6 ANFGVVG-MAVMGKNLALNVESRG-YTVA-IYNRTTSKTEEVFKEHQ---DKNLVFTK--TLEEFVGSLEKPRRIMLMVQ 77 (474)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTT-CCEE-EECSSHHHHHHHHHHTT---TSCEEECS--SHHHHHHTBCSSCEEEECCC
T ss_pred CcEEEEe-eHHHHHHHHHHHHhCC-CEEE-EEcCCHHHHHHHHHhCc---CCCeEEeC--CHHHHHhhccCCCEEEEEcc
Confidence 6899999 8999999999998654 3554 3343211 011111110 00110011 1111 124899999999
Q ss_pred Ccc-hHHHH----hhCCCCCEEEEcCCcc
Q 015441 139 HGT-TQEII----KGLPKSLKIVDLSADF 162 (406)
Q Consensus 139 ~~~-s~~~~----~~l~~G~~VIDlSa~f 162 (406)
... ..+.+ +.+..|..|||.+...
T Consensus 78 ~~~~v~~vl~~l~~~l~~g~iiId~s~~~ 106 (474)
T 2iz1_A 78 AGAATDATIKSLLPLLDIGDILIDGGNTH 106 (474)
T ss_dssp TTHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred CchHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 863 33333 3356788999988653
No 312
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=93.44 E-value=0.09 Score=50.84 Aligned_cols=85 Identities=18% Similarity=0.288 Sum_probs=52.6
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch-
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT- 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s- 142 (406)
.+|+|+| .|.+|+.+.+.|..+. +++..+. ++. .+.... .+ +.. ..++ ++.+.++|+|++|+|....
T Consensus 143 ~~vgIiG-~G~IG~~~A~~l~~~G-~~V~~~d-~~~-~~~~~~---~~-g~~---~~~l-~ell~~aDvV~l~~p~~~~t 210 (307)
T 1wwk_A 143 KTIGIIG-FGRIGYQVAKIANALG-MNILLYD-PYP-NEERAK---EV-NGK---FVDL-ETLLKESDVVTIHVPLVEST 210 (307)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEC-SSC-CHHHHH---HT-TCE---ECCH-HHHHHHCSEEEECCCCSTTT
T ss_pred ceEEEEc-cCHHHHHHHHHHHHCC-CEEEEEC-CCC-ChhhHh---hc-Ccc---ccCH-HHHHhhCCEEEEecCCChHH
Confidence 5799999 8999999999998764 5665543 221 111000 00 101 1111 1223579999999996442
Q ss_pred -----HHHHhhCCCCCEEEEcCC
Q 015441 143 -----QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 -----~~~~~~l~~G~~VIDlSa 160 (406)
.+..+.++.|..+||.+.
T Consensus 211 ~~li~~~~l~~mk~ga~lin~ar 233 (307)
T 1wwk_A 211 YHLINEERLKLMKKTAILINTSR 233 (307)
T ss_dssp TTCBCHHHHHHSCTTCEEEECSC
T ss_pred hhhcCHHHHhcCCCCeEEEECCC
Confidence 344455678999998876
No 313
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=93.36 E-value=0.084 Score=53.00 Aligned_cols=87 Identities=18% Similarity=0.263 Sum_probs=52.1
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc-h
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT-T 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~-s 142 (406)
.+|+|+| .|.+|+.+++.|..+. +++.... +.......... + +... ...+ ++.+.++|+|++++|... +
T Consensus 192 ktvGIIG-lG~IG~~vA~~l~a~G-~~V~~~d-~~~~~~~~~~~---~-G~~~--~~~l-~ell~~aDvV~l~~Plt~~t 261 (393)
T 2nac_A 192 MHVGTVA-AGRIGLAVLRRLAPFD-VHLHYTD-RHRLPESVEKE---L-NLTW--HATR-EDMYPVCDVVTLNCPLHPET 261 (393)
T ss_dssp CEEEEEC-CSHHHHHHHHHHGGGT-CEEEEEC-SSCCCHHHHHH---H-TCEE--CSSH-HHHGGGCSEEEECSCCCTTT
T ss_pred CEEEEEe-ECHHHHHHHHHHHhCC-CEEEEEc-CCccchhhHhh---c-Ccee--cCCH-HHHHhcCCEEEEecCCchHH
Confidence 5799999 9999999999998664 6665443 32211111100 0 1000 0111 223468999999999542 2
Q ss_pred -----HHHHhhCCCCCEEEEcCC
Q 015441 143 -----QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 -----~~~~~~l~~G~~VIDlSa 160 (406)
.+..+.++.|..+||.|.
T Consensus 262 ~~li~~~~l~~mk~gailIN~aR 284 (393)
T 2nac_A 262 EHMINDETLKLFKRGAYIVNTAR 284 (393)
T ss_dssp TTCBSHHHHTTSCTTEEEEECSC
T ss_pred HHHhhHHHHhhCCCCCEEEECCC
Confidence 334445567889998774
No 314
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=93.35 E-value=0.069 Score=49.66 Aligned_cols=32 Identities=25% Similarity=0.234 Sum_probs=25.2
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
|.+|.|.||||++|+.|++.|.+.. .+++.+.
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G-~~V~~~~ 34 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMA-EILRLAD 34 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGE-EEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcC-CEEEEEe
Confidence 3579999999999999999998653 4555443
No 315
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=93.32 E-value=0.02 Score=56.23 Aligned_cols=25 Identities=20% Similarity=0.355 Sum_probs=21.7
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCC
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHP 87 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp 87 (406)
.+||+|+||+|.||..|+.+|....
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~ 27 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGS 27 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTT
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCC
Confidence 4799999999999999999987543
No 316
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=93.32 E-value=0.038 Score=52.20 Aligned_cols=87 Identities=16% Similarity=0.258 Sum_probs=49.0
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch-
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT- 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s- 142 (406)
+||+|+| .|.+|+.+.+.|.... .++.. .+++. .+.... ....+...... .+.+.++|+||+|+|....
T Consensus 1 m~i~iiG-~G~mG~~~a~~l~~~g-~~V~~-~~~~~--~~~~~~----~~~g~~~~~~~-~~~~~~~Dvvi~~vp~~~~~ 70 (296)
T 2gf2_A 1 MPVGFIG-LGNMGNPMAKNLMKHG-YPLII-YDVFP--DACKEF----QDAGEQVVSSP-ADVAEKADRIITMLPTSINA 70 (296)
T ss_dssp CCEEEEC-CSTTHHHHHHHHHHTT-CCEEE-ECSST--HHHHHH----HTTTCEECSSH-HHHHHHCSEEEECCSSHHHH
T ss_pred CeEEEEe-ccHHHHHHHHHHHHCC-CEEEE-EeCCH--HHHHHH----HHcCCeecCCH-HHHHhcCCEEEEeCCCHHHH
Confidence 3799999 8999999999998653 35543 34321 111110 00011101111 1223578999999976533
Q ss_pred HHHHhh-------CCCCCEEEEcCC
Q 015441 143 QEIIKG-------LPKSLKIVDLSA 160 (406)
Q Consensus 143 ~~~~~~-------l~~G~~VIDlSa 160 (406)
.+.... +..|..|||.|+
T Consensus 71 ~~v~~~~~~~~~~l~~~~~vv~~s~ 95 (296)
T 2gf2_A 71 IEAYSGANGILKKVKKGSLLIDSST 95 (296)
T ss_dssp HHHHHSTTSGGGTCCTTCEEEECSC
T ss_pred HHHHhCchhHHhcCCCCCEEEECCC
Confidence 333332 346788999665
No 317
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=93.31 E-value=0.081 Score=52.88 Aligned_cols=37 Identities=19% Similarity=0.488 Sum_probs=33.2
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCC-ceEEEEeccCc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPY-FGIKLMTADRK 99 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~-~elv~l~s~~~ 99 (406)
|.+|.|+|+||-||.+-++.+.+||+ +++++++..+.
T Consensus 9 ~k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aL~ag~n 46 (406)
T 1q0q_A 9 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKN 46 (406)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSC
T ss_pred ceeEEEEccCcHHHHHHHHHHHhCCCccEEEEEEcCCC
Confidence 46899999999999999999999987 89999987554
No 318
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.26 E-value=0.16 Score=48.51 Aligned_cols=74 Identities=14% Similarity=0.099 Sum_probs=40.8
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCc-eEEEEeccCc---CCcccc--ccccCccccCCCcccccCcccCCCCCEEEEc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYF-GIKLMTADRK---AGQSIG--SVFPHLISQDLPTMVAVKDADFSNVDAVFCC 136 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~-elv~l~s~~~---~G~~i~--~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~a 136 (406)
++||+|+|| |.+|..+...|...... +++.+ ++.. .+..++ ...+ +.+ ........+.+++.++|+||+|
T Consensus 7 ~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~-d~~~~~~~~~~~~~~~~~~-~~~-~~~v~~~~~~~~~~~aD~Vii~ 82 (319)
T 1lld_A 7 PTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLE-DIAKERVEAEVLDMQHGSS-FYP-TVSIDGSDDPEICRDADMVVIT 82 (319)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEE-CSSHHHHHHHHHHHHHTGG-GST-TCEEEEESCGGGGTTCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEE-eCChhHHHHHHHHHHhhhh-hcC-CeEEEeCCCHHHhCCCCEEEEC
Confidence 469999996 99999999988865433 56544 3321 111111 1111 111 1111111123456789999999
Q ss_pred CCCc
Q 015441 137 LPHG 140 (406)
Q Consensus 137 l~~~ 140 (406)
++..
T Consensus 83 v~~~ 86 (319)
T 1lld_A 83 AGPR 86 (319)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9643
No 319
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=93.23 E-value=0.081 Score=50.04 Aligned_cols=87 Identities=16% Similarity=0.211 Sum_probs=51.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s 142 (406)
.+|+|+| +|.+|+.+++.|.+... ++. +.+++.. .+.+.. .+ + .....++ .+.+.++|+|+.|+|.+..
T Consensus 130 ~~v~iiG-aG~~g~aia~~L~~~g~-~V~-v~~r~~~~~~~l~~---~~-g--~~~~~~~-~~~~~~aDiVi~atp~~~~ 199 (275)
T 2hk9_A 130 KSILVLG-AGGASRAVIYALVKEGA-KVF-LWNRTKEKAIKLAQ---KF-P--LEVVNSP-EEVIDKVQVIVNTTSVGLK 199 (275)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHHTC-EEE-EECSSHHHHHHHTT---TS-C--EEECSCG-GGTGGGCSEEEECSSTTSS
T ss_pred CEEEEEC-chHHHHHHHHHHHHcCC-EEE-EEECCHHHHHHHHH---Hc-C--CeeehhH-HhhhcCCCEEEEeCCCCCC
Confidence 5899999 69999999999986553 554 4443321 111111 01 1 0001111 2234579999999998754
Q ss_pred HH---HH--hhCCCCCEEEEcCC
Q 015441 143 QE---II--KGLPKSLKIVDLSA 160 (406)
Q Consensus 143 ~~---~~--~~l~~G~~VIDlSa 160 (406)
.+ .. ..+..|..|+|++.
T Consensus 200 ~~~~~~i~~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 200 DEDPEIFNYDLIKKDHVVVDIIY 222 (275)
T ss_dssp TTCCCSSCGGGCCTTSEEEESSS
T ss_pred CCCCCCCCHHHcCCCCEEEEcCC
Confidence 21 12 23467889999876
No 320
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.21 E-value=0.11 Score=49.18 Aligned_cols=98 Identities=14% Similarity=0.146 Sum_probs=54.3
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCC-cccccc----cc-------CccccCC----Cccc-ccCc-
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAG-QSIGSV----FP-------HLISQDL----PTMV-AVKD- 124 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G-~~i~~v----~p-------~l~~~~~----~~~~-~~~~- 124 (406)
+.||+|+| .|.+|..+.+.|...- ++++.+ +++..- ...... .. .+...+. ..+. ..+.
T Consensus 4 ~~kV~VIG-aG~mG~~iA~~la~~G-~~V~l~-d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~ 80 (283)
T 4e12_A 4 ITNVTVLG-TGVLGSQIAFQTAFHG-FAVTAY-DINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLA 80 (283)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEE-CSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHH
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCC-CeEEEE-eCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHH
Confidence 35899999 7999999999998653 466554 332110 000000 00 0000000 0000 1111
Q ss_pred ccCCCCCEEEEcCCCc--chHHHHh----hCCCCCEEEEcCCccc
Q 015441 125 ADFSNVDAVFCCLPHG--TTQEIIK----GLPKSLKIVDLSADFR 163 (406)
Q Consensus 125 ~~~~~vDvVF~al~~~--~s~~~~~----~l~~G~~VIDlSa~fR 163 (406)
+.+.++|+||.|.+.. ..+++.. .+..++.++|+++...
T Consensus 81 ~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~ 125 (283)
T 4e12_A 81 QAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLL 125 (283)
T ss_dssp HHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSC
T ss_pred HHhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCC
Confidence 2357899999999987 3333333 3456888999888653
No 321
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.21 E-value=0.081 Score=50.44 Aligned_cols=30 Identities=23% Similarity=0.417 Sum_probs=23.7
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEE
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLM 94 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l 94 (406)
|.||+|+| .|.+|..+...|...- .+++.+
T Consensus 15 ~~~I~VIG-~G~mG~~iA~~la~~G-~~V~~~ 44 (302)
T 1f0y_A 15 VKHVTVIG-GGLMGAGIAQVAAATG-HTVVLV 44 (302)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCC-CeEEEE
Confidence 46899999 6999999999998653 466544
No 322
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=93.19 E-value=0.096 Score=53.76 Aligned_cols=91 Identities=12% Similarity=0.103 Sum_probs=52.4
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-Cccccc-cccCccccCCCcccccCccc----CCCCCEEEEcC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGS-VFPHLISQDLPTMVAVKDAD----FSNVDAVFCCL 137 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~-v~p~l~~~~~~~~~~~~~~~----~~~vDvVF~al 137 (406)
+||+|+| .|.+|+.+.+.|.++. .++.. .+++.. -+.+.. ..+ +..+... .+.++ +.++|+||+|+
T Consensus 3 m~IgvIG-~G~mG~~lA~~La~~G-~~V~v-~dr~~~~~~~l~~~~~~---g~gi~~~--~~~~e~v~~l~~aDvVilaV 74 (482)
T 2pgd_A 3 ADIALIG-LAVMGQNLILNMNDHG-FVVCA-FNRTVSKVDDFLANEAK---GTKVLGA--HSLEEMVSKLKKPRRIILLV 74 (482)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTT-CCEEE-ECSSTHHHHHHHHTTTT---TSSCEEC--SSHHHHHHHBCSSCEEEECS
T ss_pred CeEEEEC-hHHHHHHHHHHHHHCC-CeEEE-EeCCHHHHHHHHhcccc---CCCeEEe--CCHHHHHhhccCCCEEEEeC
Confidence 5799999 8999999999998654 35543 343211 011111 000 0111101 11112 24799999999
Q ss_pred CCc-chHHHH----hhCCCCCEEEEcCCcc
Q 015441 138 PHG-TTQEII----KGLPKSLKIVDLSADF 162 (406)
Q Consensus 138 ~~~-~s~~~~----~~l~~G~~VIDlSa~f 162 (406)
|.. ...+.+ +.+..|..|||.+...
T Consensus 75 p~~~~v~~vl~~l~~~l~~g~iII~~s~~~ 104 (482)
T 2pgd_A 75 KAGQAVDNFIEKLVPLLDIGDIIIDGGNSE 104 (482)
T ss_dssp CTTHHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred CChHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 986 344433 3456788999987643
No 323
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=93.18 E-value=0.067 Score=52.34 Aligned_cols=73 Identities=19% Similarity=0.245 Sum_probs=42.3
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCc-eEEEEeccCc---CCcc--ccccccCccccCCCcccccCcccCCCCCEEEEc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYF-GIKLMTADRK---AGQS--IGSVFPHLISQDLPTMVAVKDADFSNVDAVFCC 136 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~-elv~l~s~~~---~G~~--i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~a 136 (406)
.+||+|+|| |++|..++..|...+.+ +++.+ +... .|.. +....|.+. .... +..-+.+++.++|+||.+
T Consensus 5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~-D~~~~k~~g~a~DL~~~~~~~~-~~v~-i~~~~~~a~~~aDvVvi~ 80 (326)
T 3pqe_A 5 VNKVALIGA-GFVGSSYAFALINQGITDELVVI-DVNKEKAMGDVMDLNHGKAFAP-QPVK-TSYGTYEDCKDADIVCIC 80 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEE-CSCHHHHHHHHHHHHHTGGGSS-SCCE-EEEECGGGGTTCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEE-ecchHHHHHHHHHHHhcccccc-CCeE-EEeCcHHHhCCCCEEEEe
Confidence 469999995 99999999998866554 56555 3221 1211 222222221 1111 111123457899999999
Q ss_pred CCC
Q 015441 137 LPH 139 (406)
Q Consensus 137 l~~ 139 (406)
.+.
T Consensus 81 ag~ 83 (326)
T 3pqe_A 81 AGA 83 (326)
T ss_dssp CSC
T ss_pred ccc
Confidence 863
No 324
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=93.14 E-value=0.062 Score=51.94 Aligned_cols=32 Identities=13% Similarity=0.263 Sum_probs=26.3
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
|++|.|.||||++|+.|++.|.+.. .+++.+.
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 32 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKG-YEVHGIK 32 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-CEEEEEE
Confidence 4689999999999999999998754 4666664
No 325
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=93.14 E-value=0.051 Score=54.04 Aligned_cols=90 Identities=12% Similarity=0.246 Sum_probs=52.7
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCC-ccccccccCccccCCC----cccccCcccCCCCCEEEEcCC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAG-QSIGSVFPHLISQDLP----TMVAVKDADFSNVDAVFCCLP 138 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G-~~i~~v~p~l~~~~~~----~~~~~~~~~~~~vDvVF~al~ 138 (406)
.+|+|+|+ |.+|+.+++.+..... ++..+. ++..- ..+.+.+ +..+. ....+ .+.+.++|+||.|++
T Consensus 169 ~~V~ViG~-G~iG~~~a~~a~~~Ga-~V~~~d-~~~~~l~~~~~~~----g~~~~~~~~~~~~l-~~~l~~aDvVi~~~~ 240 (377)
T 2vhw_A 169 ADVVVIGA-GTAGYNAARIANGMGA-TVTVLD-INIDKLRQLDAEF----CGRIHTRYSSAYEL-EGAVKRADLVIGAVL 240 (377)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-EEEEEE-SCHHHHHHHHHHT----TTSSEEEECCHHHH-HHHHHHCSEEEECCC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-EEEEEe-CCHHHHHHHHHhc----CCeeEeccCCHHHH-HHHHcCCCEEEECCC
Confidence 58999996 9999999999987654 655543 32110 0111101 10100 00111 112357899999986
Q ss_pred Ccc-------hHHHHhhCCCCCEEEEcCCc
Q 015441 139 HGT-------TQEIIKGLPKSLKIVDLSAD 161 (406)
Q Consensus 139 ~~~-------s~~~~~~l~~G~~VIDlSa~ 161 (406)
... .++..+.+..|..+||.+.+
T Consensus 241 ~p~~~t~~li~~~~l~~mk~g~~iV~va~~ 270 (377)
T 2vhw_A 241 VPGAKAPKLVSNSLVAHMKPGAVLVDIAID 270 (377)
T ss_dssp CTTSCCCCCBCHHHHTTSCTTCEEEEGGGG
T ss_pred cCCCCCcceecHHHHhcCCCCcEEEEEecC
Confidence 433 45555666778899999854
No 326
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=93.05 E-value=0.078 Score=51.39 Aligned_cols=75 Identities=21% Similarity=0.271 Sum_probs=41.8
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCC-ceEEEEeccCc---CCcc--ccccccCccccCCCcccccCcccCCCCCEEEE
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPY-FGIKLMTADRK---AGQS--IGSVFPHLISQDLPTMVAVKDADFSNVDAVFC 135 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~-~elv~l~s~~~---~G~~--i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~ 135 (406)
+++||+|+|| |.+|..++..|..... -+++.+ +... .|.. +....+.+ +.+.. +..-+.+++.++|+||+
T Consensus 5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~-Di~~~~~~~~~~dl~~~~~~~-~~~~~-i~~~~~~al~~aDvVii 80 (316)
T 1ldn_A 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLI-DANESKAIGDAMDFNHGKVFA-PKPVD-IWHGDYDDCRDADLVVI 80 (316)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEE-CSSHHHHHHHHHHHHHHTTSS-SSCCE-EEECCGGGTTTCSEEEE
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEE-eCCcchHHHHHhhHHHHhhhc-CCCeE-EEcCcHHHhCCCCEEEE
Confidence 4569999997 9999999998875443 355555 4321 1111 11111111 00111 11112345789999999
Q ss_pred cCCCc
Q 015441 136 CLPHG 140 (406)
Q Consensus 136 al~~~ 140 (406)
|+|..
T Consensus 81 a~~~~ 85 (316)
T 1ldn_A 81 CAGAN 85 (316)
T ss_dssp CCSCC
T ss_pred cCCCC
Confidence 98743
No 327
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=93.05 E-value=0.092 Score=44.02 Aligned_cols=84 Identities=13% Similarity=0.122 Sum_probs=52.2
Q ss_pred ccEEEEECcc---cHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCC
Q 015441 63 QVRIGLLGAS---GYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 63 ~ikVaIvGAT---G~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~ 139 (406)
+.+|||+||| +..|..+++.|.++. +++..++-+. +++. +. +.+..+ .++.++|+|+.++|.
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g-~~V~pVnP~~------~~i~----G~--~~y~sl--~dlp~vDlavi~~p~ 68 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHG-HEFIPVGRKK------GEVL----GK--TIINER--PVIEGVDTVTLYINP 68 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHT-CCEEEESSSC------SEET----TE--ECBCSC--CCCTTCCEEEECSCH
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCC-CeEEEECCCC------CcCC----Ce--eccCCh--HHCCCCCEEEEEeCH
Confidence 3579999998 678999999888654 3787876432 1111 11 111122 122128999999999
Q ss_pred cchHHHHhhC-CCCCE-EEEcCCcc
Q 015441 140 GTTQEIIKGL-PKSLK-IVDLSADF 162 (406)
Q Consensus 140 ~~s~~~~~~l-~~G~~-VIDlSa~f 162 (406)
....++++.+ +.|++ |+ +++-|
T Consensus 69 ~~v~~~v~e~~~~g~k~v~-~~~G~ 92 (122)
T 3ff4_A 69 QNQLSEYNYILSLKPKRVI-FNPGT 92 (122)
T ss_dssp HHHGGGHHHHHHHCCSEEE-ECTTC
T ss_pred HHHHHHHHHHHhcCCCEEE-ECCCC
Confidence 8888877654 55643 44 44444
No 328
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=93.02 E-value=0.12 Score=48.66 Aligned_cols=31 Identities=19% Similarity=0.467 Sum_probs=25.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
.+|.|.||||++|+.|++.|++.. .+++.+.
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~ 32 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLENG-YSVNTTI 32 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECChhHHHHHHHHHHHHCC-CEEEEEE
Confidence 479999999999999999888653 4666554
No 329
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=92.98 E-value=0.17 Score=51.09 Aligned_cols=84 Identities=14% Similarity=0.286 Sum_probs=52.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc--
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT-- 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~-- 141 (406)
.+|+|+| .|.+|+.+.+.|..+ .+++.+.. +... .... + ......+ ++.+.++|+|++++|...
T Consensus 157 ktvGIIG-lG~IG~~vA~~l~~~-G~~V~~yd-~~~~-~~~~-------~--~~~~~sl-~ell~~aDvV~lhvPlt~~T 222 (416)
T 3k5p_A 157 KTLGIVG-YGNIGSQVGNLAESL-GMTVRYYD-TSDK-LQYG-------N--VKPAASL-DELLKTSDVVSLHVPSSKST 222 (416)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEC-TTCC-CCBT-------T--BEECSSH-HHHHHHCSEEEECCCC----
T ss_pred CEEEEEe-eCHHHHHHHHHHHHC-CCEEEEEC-Ccch-hccc-------C--cEecCCH-HHHHhhCCEEEEeCCCCHHH
Confidence 4799999 999999999999876 46776553 2210 0000 0 0001111 223467999999999643
Q ss_pred ----hHHHHhhCCCCCEEEEcCCc
Q 015441 142 ----TQEIIKGLPKSLKIVDLSAD 161 (406)
Q Consensus 142 ----s~~~~~~l~~G~~VIDlSa~ 161 (406)
..+....++.|..+||.|--
T Consensus 223 ~~li~~~~l~~mk~gailIN~aRG 246 (416)
T 3k5p_A 223 SKLITEAKLRKMKKGAFLINNARG 246 (416)
T ss_dssp -CCBCHHHHHHSCTTEEEEECSCT
T ss_pred hhhcCHHHHhhCCCCcEEEECCCC
Confidence 23444556789999988743
No 330
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=92.96 E-value=0.11 Score=50.78 Aligned_cols=85 Identities=18% Similarity=0.312 Sum_probs=51.8
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc-h
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT-T 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~-s 142 (406)
++|+|+| .|.+|+.+.+.|..+. +++..+ +++. .+.... .+ + .. ..++ ++.+.++|+|++|+|... +
T Consensus 151 ~~vgIIG-~G~iG~~iA~~l~~~G-~~V~~~-d~~~-~~~~~~---~~-g--~~-~~~l-~~~l~~aDvVil~vp~~~~t 218 (334)
T 2dbq_A 151 KTIGIIG-LGRIGQAIAKRAKGFN-MRILYY-SRTR-KEEVER---EL-N--AE-FKPL-EDLLRESDFVVLAVPLTRET 218 (334)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEE-CSSC-CHHHHH---HH-C--CE-ECCH-HHHHHHCSEEEECCCCCTTT
T ss_pred CEEEEEc-cCHHHHHHHHHHHhCC-CEEEEE-CCCc-chhhHh---hc-C--cc-cCCH-HHHHhhCCEEEECCCCChHH
Confidence 5899999 8999999999998654 566544 3322 111000 00 1 10 1111 122457899999999765 2
Q ss_pred -----HHHHhhCCCCCEEEEcCC
Q 015441 143 -----QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 -----~~~~~~l~~G~~VIDlSa 160 (406)
++..+.+..|..+||.|.
T Consensus 219 ~~~i~~~~~~~mk~~ailIn~sr 241 (334)
T 2dbq_A 219 YHLINEERLKLMKKTAILINIAR 241 (334)
T ss_dssp TTCBCHHHHHHSCTTCEEEECSC
T ss_pred HHhhCHHHHhcCCCCcEEEECCC
Confidence 233445677889998773
No 331
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=92.84 E-value=0.1 Score=51.36 Aligned_cols=88 Identities=16% Similarity=0.167 Sum_probs=52.1
Q ss_pred cEEEEECcccHHHHHHHHHHH-cCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc-
Q 015441 64 VRIGLLGASGYTGAEIVRLLA-NHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT- 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~-~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~- 141 (406)
.+|+|+| .|.+|+.+.+.|. .+. +++... +++........ .+ + .....++ ++.+.++|+|++|+|...
T Consensus 164 ~~vgIIG-~G~IG~~vA~~l~~~~G-~~V~~~-d~~~~~~~~~~---~~-g--~~~~~~l-~ell~~aDvVil~vp~~~~ 233 (348)
T 2w2k_A 164 HVLGAVG-LGAIQKEIARKAVHGLG-MKLVYY-DVAPADAETEK---AL-G--AERVDSL-EELARRSDCVSVSVPYMKL 233 (348)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTC-CEEEEE-CSSCCCHHHHH---HH-T--CEECSSH-HHHHHHCSEEEECCCCSGG
T ss_pred CEEEEEE-ECHHHHHHHHHHHHhcC-CEEEEE-CCCCcchhhHh---hc-C--cEEeCCH-HHHhccCCEEEEeCCCChH
Confidence 5799999 8999999999998 664 566544 33221110000 00 1 0001011 122457899999999754
Q ss_pred h-----HHHHhhCCCCCEEEEcCCc
Q 015441 142 T-----QEIIKGLPKSLKIVDLSAD 161 (406)
Q Consensus 142 s-----~~~~~~l~~G~~VIDlSa~ 161 (406)
+ .+..+.++.|..+||.|.-
T Consensus 234 t~~li~~~~l~~mk~gailin~srg 258 (348)
T 2w2k_A 234 THHLIDEAFFAAMKPGSRIVNTARG 258 (348)
T ss_dssp GTTCBCHHHHHHSCTTEEEEECSCG
T ss_pred HHHHhhHHHHhcCCCCCEEEECCCC
Confidence 2 2334456778899987653
No 332
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=92.76 E-value=0.042 Score=55.07 Aligned_cols=29 Identities=28% Similarity=0.504 Sum_probs=23.6
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
+||+|+| .|++|..+...|.+ ..+++.+.
T Consensus 1 MkI~VIG-~G~vG~~~A~~La~--G~~V~~~d 29 (402)
T 1dlj_A 1 MKIAVAG-SGYVGLSLGVLLSL--QNEVTIVD 29 (402)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTT--TSEEEEEC
T ss_pred CEEEEEC-CCHHHHHHHHHHhC--CCEEEEEE
Confidence 3899999 79999999999987 46766653
No 333
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=92.73 E-value=0.067 Score=51.62 Aligned_cols=72 Identities=11% Similarity=0.125 Sum_probs=41.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCc-eEEEEeccC---cCCcccccccc--CccccCCCcccccCcccCCCCCEEEEcC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYF-GIKLMTADR---KAGQSIGSVFP--HLISQDLPTMVAVKDADFSNVDAVFCCL 137 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~-elv~l~s~~---~~G~~i~~v~p--~l~~~~~~~~~~~~~~~~~~vDvVF~al 137 (406)
|||+|+|| |.||+.+.-+|...+.+ |++.+ +.. ..|.-++-.|. .+. ........-+.+++.++|+|+.+.
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~-Di~~~~~~G~a~DL~h~~~~~~-~~~~i~~~~d~~~~~~aDvVvitA 77 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALV-DIAEDLAVGEAMDLAHAAAGID-KYPKIVGGADYSLLKGSEIIVVTA 77 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEE-CSSHHHHHHHHHHHHHHHGGGT-CCCEEEEESCGGGGTTCSEEEECC
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEE-eCCCCcchhhhhhhhcccccCC-CCCeEecCCCHHHhCCCCEEEEec
Confidence 58999995 99999999988766554 56555 432 12332222110 010 011111112234678999999988
Q ss_pred C
Q 015441 138 P 138 (406)
Q Consensus 138 ~ 138 (406)
+
T Consensus 78 G 78 (294)
T 2x0j_A 78 G 78 (294)
T ss_dssp C
T ss_pred C
Confidence 7
No 334
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=92.71 E-value=0.073 Score=49.81 Aligned_cols=84 Identities=13% Similarity=0.126 Sum_probs=49.9
Q ss_pred EEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcchH
Q 015441 65 RIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQ 143 (406)
Q Consensus 65 kVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s~ 143 (406)
+|+|+| +|.+|+.+++.|..... ++. +.+++.. .+.+... +.. . ..++ .+. .++|+|+.|+|.+...
T Consensus 118 ~v~iiG-~G~~g~~~a~~l~~~g~-~v~-v~~r~~~~~~~l~~~---~~~-~---~~~~-~~~-~~~Divi~~tp~~~~~ 185 (263)
T 2d5c_A 118 PALVLG-AGGAGRAVAFALREAGL-EVW-VWNRTPQRALALAEE---FGL-R---AVPL-EKA-REARLLVNATRVGLED 185 (263)
T ss_dssp CEEEEC-CSHHHHHHHHHHHHTTC-CEE-EECSSHHHHHHHHHH---HTC-E---ECCG-GGG-GGCSEEEECSSTTTTC
T ss_pred eEEEEC-CcHHHHHHHHHHHHCCC-EEE-EEECCHHHHHHHHHH---hcc-c---hhhH-hhc-cCCCEEEEccCCCCCC
Confidence 799999 68899999999987654 554 4444321 0111110 000 0 1111 122 5789999999987532
Q ss_pred ---H-H-HhhCCCCCEEEEcCC
Q 015441 144 ---E-I-IKGLPKSLKIVDLSA 160 (406)
Q Consensus 144 ---~-~-~~~l~~G~~VIDlSa 160 (406)
. + .+.+..|..|||++.
T Consensus 186 ~~~~~l~~~~l~~g~~viD~~~ 207 (263)
T 2d5c_A 186 PSASPLPAELFPEEGAAVDLVY 207 (263)
T ss_dssp TTCCSSCGGGSCSSSEEEESCC
T ss_pred CCCCCCCHHHcCCCCEEEEeec
Confidence 1 2 233567889999874
No 335
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=92.70 E-value=0.082 Score=51.73 Aligned_cols=86 Identities=17% Similarity=0.258 Sum_probs=52.0
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc--
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT-- 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~-- 141 (406)
.+|+|+| .|.+|+.+.+.|..+. +++.+. ++.......... + +.. ...+ ++.+.++|+|++|+|...
T Consensus 146 ~tvGIIG-~G~IG~~vA~~l~~~G-~~V~~~-d~~~~~~~~~~~---~-g~~---~~~l-~ell~~aDvV~l~~P~t~~t 214 (330)
T 4e5n_A 146 ATVGFLG-MGAIGLAMADRLQGWG-ATLQYH-EAKALDTQTEQR---L-GLR---QVAC-SELFASSDFILLALPLNADT 214 (330)
T ss_dssp CEEEEEC-CSHHHHHHHHHTTTSC-CEEEEE-CSSCCCHHHHHH---H-TEE---ECCH-HHHHHHCSEEEECCCCSTTT
T ss_pred CEEEEEe-eCHHHHHHHHHHHHCC-CEEEEE-CCCCCcHhHHHh---c-Cce---eCCH-HHHHhhCCEEEEcCCCCHHH
Confidence 5899999 9999999999987663 566554 332211100000 0 100 1111 223457899999999532
Q ss_pred ----hHHHHhhCCCCCEEEEcCC
Q 015441 142 ----TQEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 142 ----s~~~~~~l~~G~~VIDlSa 160 (406)
..+..+.++.|..+||.+.
T Consensus 215 ~~li~~~~l~~mk~gailIN~ar 237 (330)
T 4e5n_A 215 LHLVNAELLALVRPGALLVNPCR 237 (330)
T ss_dssp TTCBCHHHHTTSCTTEEEEECSC
T ss_pred HHHhCHHHHhhCCCCcEEEECCC
Confidence 2344455677999998774
No 336
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=92.64 E-value=0.15 Score=48.00 Aligned_cols=31 Identities=23% Similarity=0.503 Sum_probs=25.3
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
|||.|.||||++|+.|++.|++.. .+++.+.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~ 31 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARG-LEVAVLD 31 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCC-CEEEEEE
Confidence 379999999999999999998753 4666653
No 337
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=92.60 E-value=0.11 Score=51.99 Aligned_cols=82 Identities=15% Similarity=0.250 Sum_probs=52.1
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch-
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT- 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s- 142 (406)
.+|+|+| .|.+|+.+.+.|..+ .+++.... +... . .. . +.. ...+ ++.+.++|+|++|+|....
T Consensus 117 ~tvGIIG-lG~IG~~vA~~l~~~-G~~V~~~d-~~~~-~-~~-----~-g~~---~~~l-~ell~~aDvV~l~~Plt~~g 181 (380)
T 2o4c_A 117 RTYGVVG-AGQVGGRLVEVLRGL-GWKVLVCD-PPRQ-A-RE-----P-DGE---FVSL-ERLLAEADVISLHTPLNRDG 181 (380)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEC-HHHH-H-HS-----T-TSC---CCCH-HHHHHHCSEEEECCCCCSSS
T ss_pred CEEEEEe-CCHHHHHHHHHHHHC-CCEEEEEc-CChh-h-hc-----c-Ccc---cCCH-HHHHHhCCEEEEeccCcccc
Confidence 5799999 999999999999865 36765543 2110 0 00 0 101 1111 1223578999999986543
Q ss_pred ---------HHHHhhCCCCCEEEEcCC
Q 015441 143 ---------QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 ---------~~~~~~l~~G~~VIDlSa 160 (406)
.+..+.++.|..+||.|.
T Consensus 182 ~~~T~~li~~~~l~~mk~gailIN~sR 208 (380)
T 2o4c_A 182 EHPTRHLLDEPRLAALRPGTWLVNASR 208 (380)
T ss_dssp SSCCTTSBCHHHHHTSCTTEEEEECSC
T ss_pred ccchhhhcCHHHHhhCCCCcEEEECCC
Confidence 445556678899998763
No 338
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.59 E-value=0.08 Score=52.21 Aligned_cols=90 Identities=12% Similarity=0.270 Sum_probs=53.1
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcc----cccCcccCCCCCEEEEcCC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTM----VAVKDADFSNVDAVFCCLP 138 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~----~~~~~~~~~~vDvVF~al~ 138 (406)
.+|.|+|| |-+|+.+++.+..... +++.+. ++.. -+.+.+.. ...+... ..+ .+.+.++|+||.|++
T Consensus 168 ~~VlViGa-GgvG~~aa~~a~~~Ga-~V~v~d-r~~~r~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~DvVI~~~~ 239 (361)
T 1pjc_A 168 GKVVILGG-GVVGTEAAKMAVGLGA-QVQIFD-INVERLSYLETLF----GSRVELLYSNSAEI-ETAVAEADLLIGAVL 239 (361)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-EEEEEE-SCHHHHHHHHHHH----GGGSEEEECCHHHH-HHHHHTCSEEEECCC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-EEEEEe-CCHHHHHHHHHhh----CceeEeeeCCHHHH-HHHHcCCCEEEECCC
Confidence 58999997 9999999999987654 665543 3211 01111110 0010000 011 112347999999997
Q ss_pred Ccc-------hHHHHhhCCCCCEEEEcCCc
Q 015441 139 HGT-------TQEIIKGLPKSLKIVDLSAD 161 (406)
Q Consensus 139 ~~~-------s~~~~~~l~~G~~VIDlSa~ 161 (406)
... ..+..+.+..|.+|+|++.+
T Consensus 240 ~~~~~~~~li~~~~~~~~~~g~~ivdv~~~ 269 (361)
T 1pjc_A 240 VPGRRAPILVPASLVEQMRTGSVIVDVAVD 269 (361)
T ss_dssp CTTSSCCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred cCCCCCCeecCHHHHhhCCCCCEEEEEecC
Confidence 543 34445556778899999864
No 339
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=92.57 E-value=0.085 Score=54.25 Aligned_cols=91 Identities=15% Similarity=0.258 Sum_probs=52.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCccc-C---CCCCEEEEcCC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDAD-F---SNVDAVFCCLP 138 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~-~---~~vDvVF~al~ 138 (406)
.+|+|+| .|.+|+.|.+.|.++- .++... +++.. -+.+...++ +..+... .+.++ . .++|+||+|+|
T Consensus 16 ~~IgvIG-lG~MG~~lA~~La~~G-~~V~v~-~r~~~~~~~l~~~~~---~~gi~~~--~s~~e~v~~l~~aDvVil~Vp 87 (480)
T 2zyd_A 16 QQIGVVG-MAVMGRNLALNIESRG-YTVSIF-NRSREKTEEVIAENP---GKKLVPY--YTVKEFVESLETPRRILLMVK 87 (480)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHTTT-CCEEEE-CSSHHHHHHHHHHST---TSCEEEC--SSHHHHHHTBCSSCEEEECSC
T ss_pred CeEEEEc-cHHHHHHHHHHHHhCC-CeEEEE-eCCHHHHHHHHhhCC---CCCeEEe--CCHHHHHhCCCCCCEEEEECC
Confidence 5799999 9999999999998653 455444 33211 011111110 0011001 11111 1 24899999999
Q ss_pred Cc-chHHHHh----hCCCCCEEEEcCCcc
Q 015441 139 HG-TTQEIIK----GLPKSLKIVDLSADF 162 (406)
Q Consensus 139 ~~-~s~~~~~----~l~~G~~VIDlSa~f 162 (406)
.+ ...+.+. .+..|..|||.+.-.
T Consensus 88 ~~~~v~~vl~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 88 AGAGTDAAIDSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp SSSHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred CHHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 85 3444443 345688999988754
No 340
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.56 E-value=0.13 Score=49.97 Aligned_cols=72 Identities=15% Similarity=0.191 Sum_probs=41.0
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC---Cc--cccccccCccccCCCcccc-cCcccCCCCCEEEEc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA---GQ--SIGSVFPHLISQDLPTMVA-VKDADFSNVDAVFCC 136 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~---G~--~i~~v~p~l~~~~~~~~~~-~~~~~~~~vDvVF~a 136 (406)
++||+|+|| |++|..+..+|.....++ +.+.+.... |. .+......+ ..... +.. .+.+++.++|+||.+
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~-v~L~Di~~~~l~~~~~~l~~~~~~~-~~~~~-i~~t~d~~al~~aD~Vi~a 79 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQKNLGD-VVLFDIVKNMPHGKALDTSHTNVMA-YSNCK-VSGSNTYDDLAGADVVIVT 79 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCE-EEEECSSSSHHHHHHHHHHTHHHHH-TCCCC-EEEECCGGGGTTCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHHHhhhhhc-CCCcE-EEECCCHHHhCCCCEEEEe
Confidence 469999997 999999999998766556 455553321 10 011000000 00111 111 223456899999999
Q ss_pred CC
Q 015441 137 LP 138 (406)
Q Consensus 137 l~ 138 (406)
.+
T Consensus 80 ~g 81 (322)
T 1t2d_A 80 AG 81 (322)
T ss_dssp CS
T ss_pred CC
Confidence 84
No 341
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=92.55 E-value=0.064 Score=53.53 Aligned_cols=29 Identities=28% Similarity=0.316 Sum_probs=23.7
Q ss_pred cCCccEEEEECcccHHHHHHHHHHHcCCC
Q 015441 60 SEKQVRIGLLGASGYTGAEIVRLLANHPY 88 (406)
Q Consensus 60 ~~~~ikVaIvGATG~vG~eLlrlL~~hp~ 88 (406)
+....||+|+||+|.||..++-.|...+.
T Consensus 29 ~~~~~KV~ViGAaG~VG~~la~~l~~~~l 57 (375)
T 7mdh_A 29 WKKLVNIAVSGAAGMISNHLLFKLASGEV 57 (375)
T ss_dssp CCCCEEEEEETTTSHHHHHHHHHHHHTTT
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHcCCc
Confidence 33457999999999999999998875443
No 342
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=92.55 E-value=0.094 Score=50.84 Aligned_cols=74 Identities=18% Similarity=0.240 Sum_probs=42.0
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCC-ceEEEEeccCc---CCcc--ccccccCccccCCCcccccCcccCCCCCEEEEc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPY-FGIKLMTADRK---AGQS--IGSVFPHLISQDLPTMVAVKDADFSNVDAVFCC 136 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~-~elv~l~s~~~---~G~~--i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~a 136 (406)
++||+|+|| |.+|..++..|...+. .+++.+ +... .|.. +....+.+ +.+.. +..-+.+++.++|+|+++
T Consensus 6 ~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~-Di~~~~~~g~~~dl~~~~~~~-~~~~~-v~~~~~~a~~~aDvVvi~ 81 (317)
T 3d0o_A 6 GNKVVLIGN-GAVGSSYAFSLVNQSIVDELVII-DLDTEKVRGDVMDLKHATPYS-PTTVR-VKAGEYSDCHDADLVVIC 81 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEE-CSCHHHHHHHHHHHHHHGGGS-SSCCE-EEECCGGGGTTCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEE-eCChhHhhhhhhhHHhhhhhc-CCCeE-EEeCCHHHhCCCCEEEEC
Confidence 369999997 9999999998886543 355555 3221 1211 11111111 11211 111124457899999999
Q ss_pred CCCc
Q 015441 137 LPHG 140 (406)
Q Consensus 137 l~~~ 140 (406)
.+..
T Consensus 82 ag~~ 85 (317)
T 3d0o_A 82 AGAA 85 (317)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8743
No 343
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=92.54 E-value=0.24 Score=50.65 Aligned_cols=101 Identities=10% Similarity=0.086 Sum_probs=55.4
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCc-----ccccc--ccCcccc----CCCccc-ccCcccCC
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQ-----SIGSV--FPHLISQ----DLPTMV-AVKDADFS 128 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~-----~i~~v--~p~l~~~----~~~~~~-~~~~~~~~ 128 (406)
..+.||+||| .|..|..+...|++. .++++.+.-+...+. .+... ...+... .+..+. ..+.+.+.
T Consensus 52 ~~i~kVaVIG-aG~MG~~IA~~la~a-G~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~al~ 129 (460)
T 3k6j_A 52 YDVNSVAIIG-GGTMGKAMAICFGLA-GIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFHKLS 129 (460)
T ss_dssp CCCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGGGCT
T ss_pred ccCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHHHHc
Confidence 3446899999 799999999999865 356655532211110 00000 0000000 000010 11223567
Q ss_pred CCCEEEEcCCCcch--HHHHh----hCCCCCEEEEcCCccc
Q 015441 129 NVDAVFCCLPHGTT--QEIIK----GLPKSLKIVDLSADFR 163 (406)
Q Consensus 129 ~vDvVF~al~~~~s--~~~~~----~l~~G~~VIDlSa~fR 163 (406)
++|+||.|.+.... +++.. .+..++.++|+++...
T Consensus 130 ~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~ 170 (460)
T 3k6j_A 130 NCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLD 170 (460)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSC
T ss_pred cCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChh
Confidence 99999999997643 22332 3456888889887653
No 344
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=92.52 E-value=0.22 Score=50.14 Aligned_cols=83 Identities=12% Similarity=0.165 Sum_probs=52.5
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch-
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT- 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s- 142 (406)
.+|+|+| .|.+|+.+.+.|..+. +++.+.. +... ... .+ ......+ ++.+.++|+|++++|....
T Consensus 146 ktlGiIG-lG~IG~~vA~~l~~~G-~~V~~~d-~~~~-~~~-------~~--~~~~~~l-~ell~~aDvV~l~~P~t~~t 211 (404)
T 1sc6_A 146 KKLGIIG-YGHIGTQLGILAESLG-MYVYFYD-IENK-LPL-------GN--ATQVQHL-SDLLNMSDVVSLHVPENPST 211 (404)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEC-SSCC-CCC-------TT--CEECSCH-HHHHHHCSEEEECCCSSTTT
T ss_pred CEEEEEe-ECHHHHHHHHHHHHCC-CEEEEEc-CCch-hcc-------CC--ceecCCH-HHHHhcCCEEEEccCCChHH
Confidence 4799999 9999999999998763 6775553 3211 110 00 0001111 2234679999999997532
Q ss_pred -----HHHHhhCCCCCEEEEcCC
Q 015441 143 -----QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 -----~~~~~~l~~G~~VIDlSa 160 (406)
.+....++.|..+||.|.
T Consensus 212 ~~li~~~~l~~mk~ga~lIN~aR 234 (404)
T 1sc6_A 212 KNMMGAKEISLMKPGSLLINASR 234 (404)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSC
T ss_pred HHHhhHHHHhhcCCCeEEEECCC
Confidence 334455678999998873
No 345
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=92.51 E-value=0.084 Score=51.33 Aligned_cols=73 Identities=14% Similarity=0.164 Sum_probs=42.0
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCc-eEEEEeccCc---CCc--cccccccCccccCCCcccccCcccCCCCCEEEE
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYF-GIKLMTADRK---AGQ--SIGSVFPHLISQDLPTMVAVKDADFSNVDAVFC 135 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~-elv~l~s~~~---~G~--~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~ 135 (406)
+++||+|+|| |.+|..++-+|...+.+ |++.+ +... .|. .+....+.+ .+.. +..-+.+++.++|+|+.
T Consensus 4 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~-Di~~~~~~g~~~dl~~~~~~~--~~~~-v~~~~~~a~~~aDvVii 78 (318)
T 1ez4_A 4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIV-DVVKDRTKGDALDLEDAQAFT--APKK-IYSGEYSDCKDADLVVI 78 (318)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEE-CSSHHHHHHHHHHHHGGGGGS--CCCE-EEECCGGGGTTCSEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEE-eCCchHHHHHHHHHHHHHHhc--CCeE-EEECCHHHhCCCCEEEE
Confidence 3479999997 99999999988865544 55554 4321 111 111111111 1111 11112445789999999
Q ss_pred cCCC
Q 015441 136 CLPH 139 (406)
Q Consensus 136 al~~ 139 (406)
+.+.
T Consensus 79 ~ag~ 82 (318)
T 1ez4_A 79 TAGA 82 (318)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9874
No 346
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=92.49 E-value=0.12 Score=50.29 Aligned_cols=33 Identities=12% Similarity=0.239 Sum_probs=26.9
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
||.+|.|.||||++|+.|++.|.+.. .+++.+.
T Consensus 27 M~k~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~ 59 (381)
T 1n7h_A 27 PRKIALITGITGQDGSYLTEFLLGKG-YEVHGLI 59 (381)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred hCCeEEEEcCCchHHHHHHHHHHHCC-CEEEEEe
Confidence 44689999999999999999998754 5777665
No 347
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=92.48 E-value=0.12 Score=50.14 Aligned_cols=35 Identities=11% Similarity=0.224 Sum_probs=27.4
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCceEEEEec
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTA 96 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s 96 (406)
.||++|.|.||||++|+.|++.|.+.. .+++.+..
T Consensus 22 ~M~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 56 (375)
T 1t2a_A 22 HMRNVALITGITGQDGSYLAEFLLEKG-YEVHGIVR 56 (375)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred hcCcEEEEECCCchHHHHHHHHHHHCC-CEEEEEEC
Confidence 345789999999999999999998754 57776653
No 348
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=92.44 E-value=0.13 Score=50.93 Aligned_cols=87 Identities=14% Similarity=0.187 Sum_probs=51.5
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCce-EEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc-
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFG-IKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT- 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~e-lv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~- 141 (406)
.+|+|+| .|.+|+.+++.|..+. ++ +... +++........ .+ + ......+ ++.+.++|+|++|+|...
T Consensus 165 ~tvgIIG-~G~IG~~vA~~l~~~G-~~~V~~~-d~~~~~~~~~~---~~-g--~~~~~~l-~ell~~aDvV~l~~P~t~~ 234 (364)
T 2j6i_A 165 KTIATIG-AGRIGYRVLERLVPFN-PKELLYY-DYQALPKDAEE---KV-G--ARRVENI-EELVAQADIVTVNAPLHAG 234 (364)
T ss_dssp CEEEEEC-CSHHHHHHHHHHGGGC-CSEEEEE-CSSCCCHHHHH---HT-T--EEECSSH-HHHHHTCSEEEECCCCSTT
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCC-CcEEEEE-CCCccchhHHH---hc-C--cEecCCH-HHHHhcCCEEEECCCCChH
Confidence 5799999 9999999999998654 54 6544 33221111000 00 1 0001111 223458999999999752
Q ss_pred h-----HHHHhhCCCCCEEEEcCC
Q 015441 142 T-----QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 142 s-----~~~~~~l~~G~~VIDlSa 160 (406)
+ .+..+.++.|..+||.+.
T Consensus 235 t~~li~~~~l~~mk~ga~lIn~ar 258 (364)
T 2j6i_A 235 TKGLINKELLSKFKKGAWLVNTAR 258 (364)
T ss_dssp TTTCBCHHHHTTSCTTEEEEECSC
T ss_pred HHHHhCHHHHhhCCCCCEEEECCC
Confidence 2 334445677889998764
No 349
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=92.38 E-value=0.11 Score=47.90 Aligned_cols=33 Identities=21% Similarity=0.157 Sum_probs=27.1
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCC--ceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPY--FGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~--~elv~l~ 95 (406)
+.+|.|.||+|.+|+++++.|+++.. .+++.+.
T Consensus 21 ~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~ 55 (267)
T 1sny_A 21 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTC 55 (267)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEE
T ss_pred CCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEe
Confidence 45799999999999999999997653 5776654
No 350
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=92.30 E-value=0.1 Score=50.73 Aligned_cols=98 Identities=16% Similarity=0.195 Sum_probs=52.6
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-Cccc----cccc------cCcccc----C-CCccc-ccCc-
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSI----GSVF------PHLISQ----D-LPTMV-AVKD- 124 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i----~~v~------p~l~~~----~-~~~~~-~~~~- 124 (406)
+.||+|+| +|.+|..+...|+..- ++++.. +++.. -... .... ..+.+. . ...+. ..+.
T Consensus 6 ~~kI~vIG-aG~MG~~iA~~la~~G-~~V~l~-d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~ 82 (319)
T 2dpo_A 6 AGDVLIVG-SGLVGRSWAMLFASGG-FRVKLY-DIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLA 82 (319)
T ss_dssp -CEEEEEC-CSHHHHHHHHHHHHTT-CCEEEE-CSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHH
T ss_pred CceEEEEe-eCHHHHHHHHHHHHCC-CEEEEE-eCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHH
Confidence 35899999 8999999999988653 455544 33211 0000 0000 000000 0 00011 1111
Q ss_pred ccCCCCCEEEEcCCCcch--HHHHh----hCCCCCEEEEcCCccc
Q 015441 125 ADFSNVDAVFCCLPHGTT--QEIIK----GLPKSLKIVDLSADFR 163 (406)
Q Consensus 125 ~~~~~vDvVF~al~~~~s--~~~~~----~l~~G~~VIDlSa~fR 163 (406)
+.+.++|+||.|+|.... +++.. .+..++.|+|+++...
T Consensus 83 eav~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~ 127 (319)
T 2dpo_A 83 EAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLL 127 (319)
T ss_dssp HHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCC
T ss_pred HHHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChH
Confidence 235789999999997542 23332 3456788889887653
No 351
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=92.25 E-value=0.085 Score=50.82 Aligned_cols=72 Identities=13% Similarity=0.164 Sum_probs=41.7
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCc-eEEEEeccCc---CCcccc--ccccCccccCCCccc-ccCcccCCCCCEEEEc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYF-GIKLMTADRK---AGQSIG--SVFPHLISQDLPTMV-AVKDADFSNVDAVFCC 136 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~-elv~l~s~~~---~G~~i~--~v~p~l~~~~~~~~~-~~~~~~~~~vDvVF~a 136 (406)
|||+|+|| |.+|..++..|...+.. +++.+ +... .|..++ ...+.+. ... .+. ..+.+++.++|+|+++
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~-D~~~~~~~g~~~dl~~~~~~~~-~~~-~i~~t~d~~a~~~aDiVVia 76 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALV-DIAEDLAVGEAMDLAHAAAGID-KYP-KIVGGADYSLLKGSEIIVVT 76 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEE-CSSHHHHHHHHHHHHHHHHTTT-CCC-EEEEESCGGGGTTCSEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEE-ECChHHHHHHHHHHHhhhhhcC-CCC-EEEEeCCHHHhCCCCEEEEC
Confidence 48999997 99999999988865544 55544 4322 121111 1111111 111 122 1234567899999999
Q ss_pred CCC
Q 015441 137 LPH 139 (406)
Q Consensus 137 l~~ 139 (406)
.+.
T Consensus 77 ag~ 79 (294)
T 1oju_A 77 AGL 79 (294)
T ss_dssp CCC
T ss_pred CCC
Confidence 864
No 352
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=92.23 E-value=0.11 Score=54.10 Aligned_cols=85 Identities=15% Similarity=0.218 Sum_probs=52.0
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc-ch
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG-TT 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~-~s 142 (406)
.+|+|+| .|.+|+.+.+.|..+. +++... ++...-..... + +.. ...+ ++.+.++|+|++|+|.. .+
T Consensus 143 ~~vgIIG-~G~IG~~vA~~l~~~G-~~V~~~-d~~~~~~~a~~----~-g~~---~~~l-~e~~~~aDvV~l~~P~~~~t 210 (529)
T 1ygy_A 143 KTVGVVG-LGRIGQLVAQRIAAFG-AYVVAY-DPYVSPARAAQ----L-GIE---LLSL-DDLLARADFISVHLPKTPET 210 (529)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHTTT-CEEEEE-CTTSCHHHHHH----H-TCE---ECCH-HHHHHHCSEEEECCCCSTTT
T ss_pred CEEEEEe-eCHHHHHHHHHHHhCC-CEEEEE-CCCCChhHHHh----c-CcE---EcCH-HHHHhcCCEEEECCCCchHH
Confidence 5899999 9999999999998763 566554 33221000000 0 100 0011 12345799999999976 44
Q ss_pred HH-----HHhhCCCCCEEEEcCC
Q 015441 143 QE-----IIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 ~~-----~~~~l~~G~~VIDlSa 160 (406)
.. ..+.++.|+.+||.+.
T Consensus 211 ~~~i~~~~~~~~k~g~ilin~ar 233 (529)
T 1ygy_A 211 AGLIDKEALAKTKPGVIIVNAAR 233 (529)
T ss_dssp TTCBCHHHHTTSCTTEEEEECSC
T ss_pred HHHhCHHHHhCCCCCCEEEECCC
Confidence 33 3334567899999873
No 353
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=92.16 E-value=0.083 Score=51.34 Aligned_cols=31 Identities=23% Similarity=0.313 Sum_probs=25.9
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEE
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLM 94 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l 94 (406)
|||.|.||||++|+.|++.|.+...++++.+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~ 31 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEV 31 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEE
Confidence 4899999999999999999987665566554
No 354
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=92.15 E-value=0.11 Score=48.30 Aligned_cols=87 Identities=13% Similarity=0.230 Sum_probs=49.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcchH
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQ 143 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s~ 143 (406)
+||+|+| .|.+|..+.+.|.... .++.. .++......... +...... ... .+...++|+||+|++.....
T Consensus 1 M~I~iIG-~G~mG~~la~~l~~~g-~~V~~-~~~~~~~~~~~~----~~~~g~~--~~~-~~~~~~aDvvi~~v~~~~~~ 70 (264)
T 1i36_A 1 LRVGFIG-FGEVAQTLASRLRSRG-VEVVT-SLEGRSPSTIER----ARTVGVT--ETS-EEDVYSCPVVISAVTPGVAL 70 (264)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTT-CEEEE-CCTTCCHHHHHH----HHHHTCE--ECC-HHHHHTSSEEEECSCGGGHH
T ss_pred CeEEEEe-chHHHHHHHHHHHHCC-CeEEE-eCCccCHHHHHH----HHHCCCc--CCH-HHHHhcCCEEEEECCCHHHH
Confidence 3899999 8999999999998653 36554 333101011111 0000110 111 12235799999999987554
Q ss_pred HHHhhC-C--CCCEEEEcCCc
Q 015441 144 EIIKGL-P--KSLKIVDLSAD 161 (406)
Q Consensus 144 ~~~~~l-~--~G~~VIDlSa~ 161 (406)
+.+..+ + +. .|||.|+-
T Consensus 71 ~~~~~~~~~~~~-~vi~~s~~ 90 (264)
T 1i36_A 71 GAARRAGRHVRG-IYVDINNI 90 (264)
T ss_dssp HHHHHHHTTCCS-EEEECSCC
T ss_pred HHHHHHHHhcCc-EEEEccCC
Confidence 434322 2 23 88998764
No 355
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=92.14 E-value=0.25 Score=49.51 Aligned_cols=105 Identities=23% Similarity=0.350 Sum_probs=57.3
Q ss_pred ccccCCccEEEEECcccHHHHHHHHHHHc----CCCc--eEEEEeccCc--CCcc----ccccc--cC-ccccCCCc-cc
Q 015441 57 TQKSEKQVRIGLLGASGYTGAEIVRLLAN----HPYF--GIKLMTADRK--AGQS----IGSVF--PH-LISQDLPT-MV 120 (406)
Q Consensus 57 ~~~~~~~ikVaIvGATG~vG~eLlrlL~~----hp~~--elv~l~s~~~--~G~~----i~~v~--p~-l~~~~~~~-~~ 120 (406)
...++++.||+|+| .|-.|..|..+|.+ ++.. ..+.+-.++. .++. +...+ +. |++..++. +.
T Consensus 28 ~~~~~~p~KI~ViG-aGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~ 106 (391)
T 4fgw_A 28 LKAAEKPFKVTVIG-SGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLV 106 (391)
T ss_dssp -----CCEEEEEEC-CSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEE
T ss_pred ccccCCCCeEEEEC-cCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcE
Confidence 34456678999999 99999999999984 3321 1233433332 1211 11111 11 23323321 11
Q ss_pred c-cC-cccCCCCCEEEEcCCCcchHHHHhh----CCCCCEEEEcCCcc
Q 015441 121 A-VK-DADFSNVDAVFCCLPHGTTQEIIKG----LPKSLKIVDLSADF 162 (406)
Q Consensus 121 ~-~~-~~~~~~vDvVF~al~~~~s~~~~~~----l~~G~~VIDlSa~f 162 (406)
. .| .+.+.++|+++++.|+..-++.++. +..+..+|.++--+
T Consensus 107 ~t~dl~~al~~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 107 ANPDLIDSVKDVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp EESCHHHHHTTCSEEEECSCGGGHHHHHHHHTTTSCTTCEEEECCCSC
T ss_pred EeCCHHHHHhcCCEEEEECChhhhHHHHHHhccccCCCceeEEecccc
Confidence 1 11 1234789999999999877776654 34567788665433
No 356
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=92.06 E-value=0.091 Score=51.12 Aligned_cols=74 Identities=12% Similarity=0.174 Sum_probs=41.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCc-eEEEEeccCc---CCccccccccC-ccccCCCcccccCcccCCCCCEEEEcCC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYF-GIKLMTADRK---AGQSIGSVFPH-LISQDLPTMVAVKDADFSNVDAVFCCLP 138 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~-elv~l~s~~~---~G~~i~~v~p~-l~~~~~~~~~~~~~~~~~~vDvVF~al~ 138 (406)
|||+|+|| |.+|..++..|...+.+ +++.+ +... .|...+-.+.. +...+......-+.+++.++|+||.+.+
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~-D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag 78 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMV-DIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAG 78 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEE-CSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEE-eCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCC
Confidence 48999996 99999999988866554 55444 4322 12111111100 0001111111112456789999999987
Q ss_pred C
Q 015441 139 H 139 (406)
Q Consensus 139 ~ 139 (406)
.
T Consensus 79 ~ 79 (314)
T 3nep_X 79 L 79 (314)
T ss_dssp C
T ss_pred C
Confidence 4
No 357
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=92.05 E-value=0.14 Score=49.61 Aligned_cols=85 Identities=13% Similarity=0.157 Sum_probs=52.6
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc-h
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT-T 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~-s 142 (406)
.+|+|+| .|.+|+.+.+.|..+. +++..+. ++. .+.... .+ +.. ..++ ++.+.++|+|++|+|... +
T Consensus 143 ~~vgIIG-~G~IG~~~A~~l~~~G-~~V~~~d-~~~-~~~~~~---~~-g~~---~~~l-~ell~~aDvVvl~~P~~~~t 210 (313)
T 2ekl_A 143 KTIGIVG-FGRIGTKVGIIANAMG-MKVLAYD-ILD-IREKAE---KI-NAK---AVSL-EELLKNSDVISLHVTVSKDA 210 (313)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTT-CEEEEEC-SSC-CHHHHH---HT-TCE---ECCH-HHHHHHCSEEEECCCCCTTS
T ss_pred CEEEEEe-eCHHHHHHHHHHHHCC-CEEEEEC-CCc-chhHHH---hc-Cce---ecCH-HHHHhhCCEEEEeccCChHH
Confidence 5899999 8999999999998664 5665543 322 111000 00 100 1111 122357899999999544 2
Q ss_pred -----HHHHhhCCCCCEEEEcCC
Q 015441 143 -----QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 -----~~~~~~l~~G~~VIDlSa 160 (406)
.+..+.++.|..+||.+.
T Consensus 211 ~~li~~~~l~~mk~ga~lIn~ar 233 (313)
T 2ekl_A 211 KPIIDYPQFELMKDNVIIVNTSR 233 (313)
T ss_dssp CCSBCHHHHHHSCTTEEEEESSC
T ss_pred HHhhCHHHHhcCCCCCEEEECCC
Confidence 344456678899998876
No 358
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=92.03 E-value=0.25 Score=47.58 Aligned_cols=93 Identities=18% Similarity=0.304 Sum_probs=54.3
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc-------CCccccccccCccc-cCCCcccccCcccCCCCCEEE
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK-------AGQSIGSVFPHLIS-QDLPTMVAVKDADFSNVDAVF 134 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~-------~G~~i~~v~p~l~~-~~~~~~~~~~~~~~~~vDvVF 134 (406)
++||+|+| .|.+|..+...|.... .++..+ .+.. .|..+. .+.... ..+.. ..+.++..++|+||
T Consensus 19 ~~kI~IiG-aGa~G~~~a~~L~~~G-~~V~l~-~~~~~~~~i~~~g~~~~--~~~~~~~~~~~~--~~~~~~~~~~D~vi 91 (318)
T 3hwr_A 19 GMKVAIMG-AGAVGCYYGGMLARAG-HEVILI-ARPQHVQAIEATGLRLE--TQSFDEQVKVSA--SSDPSAVQGADLVL 91 (318)
T ss_dssp -CEEEEES-CSHHHHHHHHHHHHTT-CEEEEE-CCHHHHHHHHHHCEEEE--CSSCEEEECCEE--ESCGGGGTTCSEEE
T ss_pred CCcEEEEC-cCHHHHHHHHHHHHCC-CeEEEE-EcHhHHHHHHhCCeEEE--cCCCcEEEeeee--eCCHHHcCCCCEEE
Confidence 47999999 8999999999998543 366555 3221 121111 111100 01110 11122346899999
Q ss_pred EcCCCcchHHHHhh----CCCCCEEEEcCCcc
Q 015441 135 CCLPHGTTQEIIKG----LPKSLKIVDLSADF 162 (406)
Q Consensus 135 ~al~~~~s~~~~~~----l~~G~~VIDlSa~f 162 (406)
+|++.....+.++. +..+..||.+..-+
T Consensus 92 lavk~~~~~~~l~~l~~~l~~~~~iv~~~nGi 123 (318)
T 3hwr_A 92 FCVKSTDTQSAALAMKPALAKSALVLSLQNGV 123 (318)
T ss_dssp ECCCGGGHHHHHHHHTTTSCTTCEEEEECSSS
T ss_pred EEcccccHHHHHHHHHHhcCCCCEEEEeCCCC
Confidence 99998866666544 34567888776654
No 359
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=92.01 E-value=0.11 Score=53.36 Aligned_cols=94 Identities=16% Similarity=0.235 Sum_probs=51.7
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCc-cccCCCcccccCccc----CCCCCEEEEcC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHL-ISQDLPTMVAVKDAD----FSNVDAVFCCL 137 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l-~~~~~~~~~~~~~~~----~~~vDvVF~al 137 (406)
+||+|+| .|.+|+.+.+.|.++. .++.. .+++.. -..+...++.. .+..+... .+.++ +.++|+||+|+
T Consensus 2 MkIgVIG-~G~mG~~lA~~La~~G-~~V~v-~dr~~~~~~~l~~~~g~~~~~~~i~~~--~~~~e~v~~l~~aDvVilaV 76 (478)
T 1pgj_A 2 MDVGVVG-LGVMGANLALNIAEKG-FKVAV-FNRTYSKSEEFMKANASAPFAGNLKAF--ETMEAFAASLKKPRKALILV 76 (478)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTT-CCEEE-ECSSHHHHHHHHHHTTTSTTGGGEEEC--SCHHHHHHHBCSSCEEEECC
T ss_pred CEEEEEC-hHHHHHHHHHHHHHCC-CEEEE-EeCCHHHHHHHHHhcCCCCCCCCeEEE--CCHHHHHhcccCCCEEEEec
Confidence 4799999 8999999999998654 35543 343211 01111100000 00001001 11112 12589999999
Q ss_pred CCc-chHHHH----hhCCCCCEEEEcCCcc
Q 015441 138 PHG-TTQEII----KGLPKSLKIVDLSADF 162 (406)
Q Consensus 138 ~~~-~s~~~~----~~l~~G~~VIDlSa~f 162 (406)
|.. ...+.+ +.+..|..|||.+.-.
T Consensus 77 p~~~~v~~vl~~l~~~l~~g~iIId~sng~ 106 (478)
T 1pgj_A 77 QAGAATDSTIEQLKKVFEKGDILVDTGNAH 106 (478)
T ss_dssp CCSHHHHHHHHHHHHHCCTTCEEEECCCCC
T ss_pred CChHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 986 334433 3456788999987543
No 360
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=91.96 E-value=0.15 Score=48.73 Aligned_cols=94 Identities=17% Similarity=0.210 Sum_probs=51.7
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEecc--Cc-CCccccccc--cCccccCCCccccc---Cc-ccCCCCCEEE
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTAD--RK-AGQSIGSVF--PHLISQDLPTMVAV---KD-ADFSNVDAVF 134 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~--~~-~G~~i~~v~--p~l~~~~~~~~~~~---~~-~~~~~vDvVF 134 (406)
+||+|+| .|.+|..+...|.+.. .++..+. + +. .-+.+.... ... +..+..+... +. +...++|+||
T Consensus 1 m~I~iiG-~G~mG~~~a~~L~~~g-~~V~~~~-r~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~D~vi 76 (335)
T 1txg_A 1 MIVSILG-AGAMGSALSVPLVDNG-NEVRIWG-TEFDTEILKSISAGREHPRL-GVKLNGVEIFWPEQLEKCLENAEVVL 76 (335)
T ss_dssp CEEEEES-CCHHHHHHHHHHHHHC-CEEEEEC-CGGGHHHHHHHHTTCCBTTT-TBCCCSEEEECGGGHHHHHTTCSEEE
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCC-CeEEEEE-ccCCHHHHHHHHHhCcCccc-CccccceEEecHHhHHHHHhcCCEEE
Confidence 3899999 7999999999887532 3555443 3 21 001111100 000 0000000111 11 2246899999
Q ss_pred EcCCCcchHHHHhh---CCCCCEEEEcCCc
Q 015441 135 CCLPHGTTQEIIKG---LPKSLKIVDLSAD 161 (406)
Q Consensus 135 ~al~~~~s~~~~~~---l~~G~~VIDlSa~ 161 (406)
+|++.....+.++. +..+..|||++.-
T Consensus 77 ~~v~~~~~~~v~~~i~~l~~~~~vv~~~ng 106 (335)
T 1txg_A 77 LGVSTDGVLPVMSRILPYLKDQYIVLISKG 106 (335)
T ss_dssp ECSCGGGHHHHHHHHTTTCCSCEEEECCCS
T ss_pred EcCChHHHHHHHHHHhcCCCCCEEEEEcCc
Confidence 99998866555433 4457789998743
No 361
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.85 E-value=0.12 Score=50.38 Aligned_cols=74 Identities=18% Similarity=0.234 Sum_probs=40.7
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc--CCccccccccC-ccccCCCccc-ccCcccCCCCCEEEEcCC
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK--AGQSIGSVFPH-LISQDLPTMV-AVKDADFSNVDAVFCCLP 138 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~--~G~~i~~v~p~-l~~~~~~~~~-~~~~~~~~~vDvVF~al~ 138 (406)
++||+|+|| |.+|..+..+|......+++.+--... .|...+-.+.. +...... +. ..+.+++.++|+||.+.+
T Consensus 7 ~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~-v~~t~d~~a~~~aDiVIiaag 84 (324)
T 3gvi_A 7 RNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAK-FTGANDYAAIEGADVVIVTAG 84 (324)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCC-EEEESSGGGGTTCSEEEECCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCE-EEEeCCHHHHCCCCEEEEccC
Confidence 369999997 999999999888654336655532111 11111111100 0001111 21 123356789999999976
No 362
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=91.80 E-value=0.14 Score=50.12 Aligned_cols=74 Identities=8% Similarity=0.012 Sum_probs=40.8
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCc-eEEEEeccCc---CCcccccccc-CccccCCCcccccCcccCCCCCEEEEcC
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYF-GIKLMTADRK---AGQSIGSVFP-HLISQDLPTMVAVKDADFSNVDAVFCCL 137 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~-elv~l~s~~~---~G~~i~~v~p-~l~~~~~~~~~~~~~~~~~~vDvVF~al 137 (406)
..||+|+|| |.+|..++..|...+.+ +++.+ +... .|...+-.+. .+.. ........+.+++.++|+||.+.
T Consensus 21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~-Di~~~~~~g~a~DL~~~~~~~~-~~~i~~t~d~~~~~daDiVIita 97 (330)
T 3ldh_A 21 YNKITVVGC-DAVGMADAISVLMKDLADEVALV-DVMEDKLKGEMMDLEHGSLFLH-TAKIVSGKDYSVSAGSKLVVITA 97 (330)
T ss_dssp CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEE-CSCHHHHHHHHHHHHHHGGGSC-CSEEEEESSSCSCSSCSEEEECC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEE-ECCHHHHHHHHHHhhhhhhccc-CCeEEEcCCHHHhCCCCEEEEeC
Confidence 368999997 99999999988866544 55554 3221 1211110000 0100 00001112234578999999987
Q ss_pred CC
Q 015441 138 PH 139 (406)
Q Consensus 138 ~~ 139 (406)
+.
T Consensus 98 G~ 99 (330)
T 3ldh_A 98 GA 99 (330)
T ss_dssp SC
T ss_pred CC
Confidence 64
No 363
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=91.79 E-value=0.15 Score=49.86 Aligned_cols=84 Identities=23% Similarity=0.361 Sum_probs=50.4
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc-ch
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG-TT 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~-~s 142 (406)
.+|+|+| .|.+|+.+.+.|..+. +++... +++. .+.... .+ + .. ..++ ++.+.++|+|++|+|.. .+
T Consensus 147 ~~vgIIG-~G~iG~~vA~~l~~~G-~~V~~~-d~~~-~~~~~~---~~-g--~~-~~~l-~e~l~~aDiVil~vp~~~~t 214 (333)
T 2d0i_A 147 KKVGILG-MGAIGKAIARRLIPFG-VKLYYW-SRHR-KVNVEK---EL-K--AR-YMDI-DELLEKSDIVILALPLTRDT 214 (333)
T ss_dssp CEEEEEC-CSHHHHHHHHHHGGGT-CEEEEE-CSSC-CHHHHH---HH-T--EE-ECCH-HHHHHHCSEEEECCCCCTTT
T ss_pred CEEEEEc-cCHHHHHHHHHHHHCC-CEEEEE-CCCc-chhhhh---hc-C--ce-ecCH-HHHHhhCCEEEEcCCCChHH
Confidence 5799999 8999999999998653 566544 3322 111000 00 1 00 1111 12245789999999976 22
Q ss_pred -----HHHHhhCCCCCEEEEcCC
Q 015441 143 -----QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 -----~~~~~~l~~G~~VIDlSa 160 (406)
.+..+.++.| .+||.|.
T Consensus 215 ~~~i~~~~~~~mk~g-ilin~sr 236 (333)
T 2d0i_A 215 YHIINEERVKKLEGK-YLVNIGR 236 (333)
T ss_dssp TTSBCHHHHHHTBTC-EEEECSC
T ss_pred HHHhCHHHHhhCCCC-EEEECCC
Confidence 2334456778 8998773
No 364
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.77 E-value=0.11 Score=43.77 Aligned_cols=92 Identities=12% Similarity=0.179 Sum_probs=48.1
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccc-cccCccccCCCcccccCcccCCCCCEEEEcCCCc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGS-VFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG 140 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~-v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~ 140 (406)
++.+|.|+| .|.+|+.+++.|.... .+++.+..+...-+.+.. ..+.+.+ +......+......++|+|+.|++..
T Consensus 6 ~~~~viIiG-~G~~G~~la~~L~~~g-~~v~vid~~~~~~~~~~~~g~~~i~g-d~~~~~~l~~a~i~~ad~vi~~~~~~ 82 (140)
T 3fwz_A 6 ICNHALLVG-YGRVGSLLGEKLLASD-IPLVVIETSRTRVDELRERGVRAVLG-NAANEEIMQLAHLECAKWLILTIPNG 82 (140)
T ss_dssp CCSCEEEEC-CSHHHHHHHHHHHHTT-CCEEEEESCHHHHHHHHHTTCEEEES-CTTSHHHHHHTTGGGCSEEEECCSCH
T ss_pred CCCCEEEEC-cCHHHHHHHHHHHHCC-CCEEEEECCHHHHHHHHHcCCCEEEC-CCCCHHHHHhcCcccCCEEEEECCCh
Confidence 345799999 6999999999998643 466666532211011110 0000111 11101111111235789999999976
Q ss_pred chHH-HH---hhCCCCCEEE
Q 015441 141 TTQE-II---KGLPKSLKIV 156 (406)
Q Consensus 141 ~s~~-~~---~~l~~G~~VI 156 (406)
.... .+ +.+..+.+||
T Consensus 83 ~~n~~~~~~a~~~~~~~~ii 102 (140)
T 3fwz_A 83 YEAGEIVASARAKNPDIEII 102 (140)
T ss_dssp HHHHHHHHHHHHHCSSSEEE
T ss_pred HHHHHHHHHHHHHCCCCeEE
Confidence 5432 22 2233356777
No 365
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=91.74 E-value=0.12 Score=49.62 Aligned_cols=92 Identities=17% Similarity=0.291 Sum_probs=52.7
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc-------CCccccccccCccccCCCcccccCcccCCCCCEEE
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK-------AGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVF 134 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~-------~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF 134 (406)
|++||+|+| .|.+|..+...|. . ..++..+..... .|..+.. .+...+.....+.+...++|+||
T Consensus 1 M~mkI~IiG-aGa~G~~~a~~L~-~-g~~V~~~~r~~~~~~~l~~~G~~~~~-----~~~~~~~~~~~~~~~~~~~D~vi 72 (307)
T 3ego_A 1 MSLKIGIIG-GGSVGLLCAYYLS-L-YHDVTVVTRRQEQAAAIQSEGIRLYK-----GGEEFRADCSADTSINSDFDLLV 72 (307)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHH-T-TSEEEEECSCHHHHHHHHHHCEEEEE-----TTEEEEECCEEESSCCSCCSEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHh-c-CCceEEEECCHHHHHHHHhCCceEec-----CCCeecccccccccccCCCCEEE
Confidence 567999999 8999999999988 3 456666542211 1111110 01000000011112335789999
Q ss_pred EcCCCcchHHHHhhCC---CCCEEEEcCCcc
Q 015441 135 CCLPHGTTQEIIKGLP---KSLKIVDLSADF 162 (406)
Q Consensus 135 ~al~~~~s~~~~~~l~---~G~~VIDlSa~f 162 (406)
+|++.....+.++.+. .+. ||.+..-.
T Consensus 73 lavK~~~~~~~l~~l~~~~~~~-ivs~~nGi 102 (307)
T 3ego_A 73 VTVKQHQLQSVFSSLERIGKTN-ILFLQNGM 102 (307)
T ss_dssp ECCCGGGHHHHHHHTTSSCCCE-EEECCSSS
T ss_pred EEeCHHHHHHHHHHhhcCCCCe-EEEecCCc
Confidence 9999887777776653 334 77665443
No 366
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=91.70 E-value=0.16 Score=49.54 Aligned_cols=84 Identities=14% Similarity=0.257 Sum_probs=52.3
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch-
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT- 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s- 142 (406)
.+|+|+| .|.+|+.+++.|..+. +++..+. ++. .+.... + . .. ...+ ++.+.++|+|++|+|....
T Consensus 147 ~~vgIiG-~G~IG~~~A~~l~~~G-~~V~~~d-~~~-~~~~~~----~-~-~~--~~~l-~ell~~aDvV~l~~p~~~~t 213 (333)
T 1j4a_A 147 QVVGVVG-TGHIGQVFMQIMEGFG-AKVITYD-IFR-NPELEK----K-G-YY--VDSL-DDLYKQADVISLHVPDVPAN 213 (333)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEC-SSC-CHHHHH----T-T-CB--CSCH-HHHHHHCSEEEECSCCCGGG
T ss_pred CEEEEEc-cCHHHHHHHHHHHHCC-CEEEEEC-CCc-chhHHh----h-C-ee--cCCH-HHHHhhCCEEEEcCCCcHHH
Confidence 5799999 9999999999998663 5665543 322 111111 0 0 00 1011 1223578999999996532
Q ss_pred -----HHHHhhCCCCCEEEEcCC
Q 015441 143 -----QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 -----~~~~~~l~~G~~VIDlSa 160 (406)
.+..+.++.|..+||.|.
T Consensus 214 ~~li~~~~l~~mk~ga~lIn~ar 236 (333)
T 1j4a_A 214 VHMINDESIAKMKQDVVIVNVSR 236 (333)
T ss_dssp TTCBSHHHHHHSCTTEEEEECSC
T ss_pred HHHHhHHHHhhCCCCcEEEECCC
Confidence 334455677899998865
No 367
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.70 E-value=0.18 Score=50.79 Aligned_cols=94 Identities=19% Similarity=0.304 Sum_probs=54.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCC-ccccccccCccccC----------------CCc------cc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAG-QSIGSVFPHLISQD----------------LPT------MV 120 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G-~~i~~v~p~l~~~~----------------~~~------~~ 120 (406)
.||+|+| .|.+|...++.+...- .++. +.+++..- ..+.+....+...+ +.. ..
T Consensus 191 ~kV~ViG-~G~iG~~aa~~a~~lG-a~V~-v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 191 AKIFVMG-AGVAGLQAIATARRLG-AVVS-ATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT-CEEE-EECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred CEEEEEC-CcHHHHHHHHHHHHCC-CEEE-EEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 6899999 6999999999998664 3554 44433211 01111000000000 000 00
Q ss_pred ccCcccCCCCCEEEEcC-------CCcchHHHHhhCCCCCEEEEcCCc
Q 015441 121 AVKDADFSNVDAVFCCL-------PHGTTQEIIKGLPKSLKIVDLSAD 161 (406)
Q Consensus 121 ~~~~~~~~~vDvVF~al-------~~~~s~~~~~~l~~G~~VIDlSa~ 161 (406)
.+ .+.+.++|+||.|. |.-++++.++..+.|.+|||+|.+
T Consensus 268 ~l-~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d 314 (405)
T 4dio_A 268 LV-AEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVE 314 (405)
T ss_dssp HH-HHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGG
T ss_pred HH-HHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCC
Confidence 01 11235899999984 233667777778889999999976
No 368
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=91.69 E-value=0.056 Score=52.94 Aligned_cols=95 Identities=8% Similarity=0.143 Sum_probs=51.4
Q ss_pred EEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc-CCccccccc--cC-ccccCCC-cccc-cCc-ccCCCCCEEEEcC
Q 015441 65 RIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK-AGQSIGSVF--PH-LISQDLP-TMVA-VKD-ADFSNVDAVFCCL 137 (406)
Q Consensus 65 kVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~-~G~~i~~v~--p~-l~~~~~~-~~~~-~~~-~~~~~vDvVF~al 137 (406)
||+|+| .|.+|..+...|.... .++..+ +++. .-+.+.... +. +.+..++ .+.. .+. +...++|+||+|+
T Consensus 17 kI~iIG-~G~mG~~la~~L~~~G-~~V~~~-~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav 93 (366)
T 1evy_A 17 KAVVFG-SGAFGTALAMVLSKKC-REVCVW-HMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVI 93 (366)
T ss_dssp EEEEEC-CSHHHHHHHHHHTTTE-EEEEEE-CSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECC
T ss_pred eEEEEC-CCHHHHHHHHHHHhCC-CEEEEE-ECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECC
Confidence 999999 7999999999997542 355444 3321 001111100 00 0010110 0111 111 2246799999999
Q ss_pred CCcchHHHHhh--------CCC-CCEEEEcCCcc
Q 015441 138 PHGTTQEIIKG--------LPK-SLKIVDLSADF 162 (406)
Q Consensus 138 ~~~~s~~~~~~--------l~~-G~~VIDlSa~f 162 (406)
+.....+.+.. +.. +..|||++.-.
T Consensus 94 ~~~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi 127 (366)
T 1evy_A 94 PTQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGI 127 (366)
T ss_dssp CHHHHHHHHHHHCHHHHHHHHHHTCCEEECCCSC
T ss_pred ChHHHHHHHHHhHHHHHHhcCccCCEEEEECCcC
Confidence 97555544433 335 78899988543
No 369
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=91.67 E-value=0.11 Score=50.38 Aligned_cols=88 Identities=15% Similarity=0.103 Sum_probs=54.4
Q ss_pred cEEEEE-CcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCC--CCCEEEEcCCCc
Q 015441 64 VRIGLL-GASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFS--NVDAVFCCLPHG 140 (406)
Q Consensus 64 ikVaIv-GATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~--~vDvVF~al~~~ 140 (406)
.+++|+ |+||..|+.+++.|.++. +++++-...+..|+.+. + ++.+..+ .+... ++|+++.++|..
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~~G-~~~v~~VnP~~~g~~i~-------G--~~vy~sl-~el~~~~~vD~avI~vP~~ 82 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALEYG-TNLVGGTTPGKGGKTHL-------G--LPVFNTV-KEAKEQTGATASVIYVPPP 82 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT-CEEEEEECTTCTTCEET-------T--EEEESSH-HHHHHHHCCCEEEECCCHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHCC-CcEEEEeCCCcCcceEC-------C--eeeechH-HHhhhcCCCCEEEEecCHH
Confidence 457888 999999999999888654 55554444443343321 1 1111111 11112 689999999999
Q ss_pred chHHHHhhC-CCCCEE-EEcCCcc
Q 015441 141 TTQEIIKGL-PKSLKI-VDLSADF 162 (406)
Q Consensus 141 ~s~~~~~~l-~~G~~V-IDlSa~f 162 (406)
...+.+..+ ++|++. |=.+.-|
T Consensus 83 ~~~~~~~e~i~~Gi~~iv~~t~G~ 106 (305)
T 2fp4_A 83 FAAAAINEAIDAEVPLVVCITEGI 106 (305)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCCC
T ss_pred HHHHHHHHHHHCCCCEEEEECCCC
Confidence 888887754 777643 3355544
No 370
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.67 E-value=0.18 Score=50.41 Aligned_cols=94 Identities=18% Similarity=0.217 Sum_probs=54.3
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCC-ccccccccCcc----------c--cCCC------cccccCc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAG-QSIGSVFPHLI----------S--QDLP------TMVAVKD 124 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G-~~i~~v~p~l~----------~--~~~~------~~~~~~~ 124 (406)
.||+|+| .|.+|...++.+...- .++.. .+++..- ..+.+....+. + ..+. ....+ .
T Consensus 185 ~kV~ViG-~G~iG~~aa~~a~~lG-a~V~v-~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l-~ 260 (381)
T 3p2y_A 185 ASALVLG-VGVAGLQALATAKRLG-AKTTG-YDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQAL-E 260 (381)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHHT-CEEEE-ECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHH-H
T ss_pred CEEEEEC-chHHHHHHHHHHHHCC-CEEEE-EeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHH-H
Confidence 5899999 6999999999988654 36544 4433210 01111000000 0 0000 00011 1
Q ss_pred ccCCCCCEEEEcC--C-----CcchHHHHhhCCCCCEEEEcCCc
Q 015441 125 ADFSNVDAVFCCL--P-----HGTTQEIIKGLPKSLKIVDLSAD 161 (406)
Q Consensus 125 ~~~~~vDvVF~al--~-----~~~s~~~~~~l~~G~~VIDlSa~ 161 (406)
+.+.++|+||.|. | .-++++.++..+.|.+|||++.+
T Consensus 261 e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d 304 (381)
T 3p2y_A 261 DAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGE 304 (381)
T ss_dssp HHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGG
T ss_pred HHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCC
Confidence 2246899999884 2 33567777888889999999975
No 371
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=90.94 E-value=0.033 Score=50.46 Aligned_cols=90 Identities=13% Similarity=0.165 Sum_probs=52.6
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG 140 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~ 140 (406)
.+.+||+|+| .|.+|+.+.+.|.... .++..+ +++..-..+ ...... .... .+.+.++|+||+|++..
T Consensus 17 ~~~~~I~iIG-~G~mG~~la~~L~~~G-~~V~~~-~r~~~~~~~-------~~~g~~-~~~~-~~~~~~aDvVilav~~~ 84 (201)
T 2yjz_A 17 EKQGVVCIFG-TGDFGKSLGLKMLQCG-YSVVFG-SRNPQVSSL-------LPRGAE-VLCY-SEAASRSDVIVLAVHRE 84 (201)
Confidence 3446899999 8999999999887542 344433 332211111 110111 1111 22346799999999986
Q ss_pred chHHHHhh--CCCCCEEEEcCCcc
Q 015441 141 TTQEIIKG--LPKSLKIVDLSADF 162 (406)
Q Consensus 141 ~s~~~~~~--l~~G~~VIDlSa~f 162 (406)
...+.... ...+..|||+++-.
T Consensus 85 ~~~~v~~l~~~~~~~ivI~~~~G~ 108 (201)
T 2yjz_A 85 HYDFLAELADSLKGRVLIDVSNNQ 108 (201)
Confidence 55544421 22467889988765
No 372
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=91.62 E-value=0.14 Score=52.01 Aligned_cols=38 Identities=16% Similarity=0.508 Sum_probs=32.1
Q ss_pred CccEEEEECcccHHHHHHHHHHHc---CCC-ceEEEEeccCc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLAN---HPY-FGIKLMTADRK 99 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~---hp~-~elv~l~s~~~ 99 (406)
+|.||+|+|+||-||.+-++.+.+ ||+ +++++++..+.
T Consensus 76 ~mk~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaAg~N 117 (488)
T 3au8_A 76 KPINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVNKS 117 (488)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEESSC
T ss_pred cceEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEcCCC
Confidence 356899999999999999999998 555 89999987554
No 373
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=91.58 E-value=0.18 Score=49.15 Aligned_cols=74 Identities=18% Similarity=0.248 Sum_probs=41.0
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc--CCccccccccC-ccccCCCccc-ccCcccCCCCCEEEEcCCC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK--AGQSIGSVFPH-LISQDLPTMV-AVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~--~G~~i~~v~p~-l~~~~~~~~~-~~~~~~~~~vDvVF~al~~ 139 (406)
+||+|+| .|.+|..++..|...+..+++.+--... .|...+-.+.. +.+.... +. ..+.+++.++|+||.+.+.
T Consensus 6 ~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~-v~~t~d~~a~~~aDvVIi~ag~ 83 (321)
T 3p7m_A 6 KKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFK-VRGTNDYKDLENSDVVIVTAGV 83 (321)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCC-EEEESCGGGGTTCSEEEECCSC
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcE-EEEcCCHHHHCCCCEEEEcCCc
Confidence 6999999 5999999999888655346655532211 12111111100 0011111 22 1234567899999999763
No 374
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=91.51 E-value=0.22 Score=48.20 Aligned_cols=92 Identities=18% Similarity=0.239 Sum_probs=52.8
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc-------CCccccccccCccccCCCcccccCcccCCCCCEEEEc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK-------AGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCC 136 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~-------~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~a 136 (406)
+||+|+| .|.+|..+...|.... .++..+. +.. .|..+.. +... .........+.++..++|+||+|
T Consensus 4 mkI~IiG-aG~~G~~~a~~L~~~g-~~V~~~~-r~~~~~~~~~~g~~~~~--~~~~-~~~~~~~~~~~~~~~~~D~Vila 77 (335)
T 3ghy_A 4 TRICIVG-AGAVGGYLGARLALAG-EAINVLA-RGATLQALQTAGLRLTE--DGAT-HTLPVRATHDAAALGEQDVVIVA 77 (335)
T ss_dssp CCEEEES-CCHHHHHHHHHHHHTT-CCEEEEC-CHHHHHHHHHTCEEEEE--TTEE-EEECCEEESCHHHHCCCSEEEEC
T ss_pred CEEEEEC-cCHHHHHHHHHHHHCC-CEEEEEE-ChHHHHHHHHCCCEEec--CCCe-EEEeeeEECCHHHcCCCCEEEEe
Confidence 6899999 8999999999998543 3555554 321 1211111 0000 00000001122234679999999
Q ss_pred CCCcchHHHHhhC----CCCCEEEEcCCc
Q 015441 137 LPHGTTQEIIKGL----PKSLKIVDLSAD 161 (406)
Q Consensus 137 l~~~~s~~~~~~l----~~G~~VIDlSa~ 161 (406)
++.....+.++.+ ..+..||.+..-
T Consensus 78 vk~~~~~~~~~~l~~~l~~~~~iv~~~nG 106 (335)
T 3ghy_A 78 VKAPALESVAAGIAPLIGPGTCVVVAMNG 106 (335)
T ss_dssp CCHHHHHHHHGGGSSSCCTTCEEEECCSS
T ss_pred CCchhHHHHHHHHHhhCCCCCEEEEECCC
Confidence 9987666666543 357788886654
No 375
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=91.50 E-value=0.14 Score=46.27 Aligned_cols=32 Identities=19% Similarity=0.119 Sum_probs=26.4
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCC-ceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPY-FGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~-~elv~l~ 95 (406)
.+|.|.||+|.+|+++++.|+++.. .+++.+.
T Consensus 4 k~vlItGasggiG~~la~~l~~~g~~~~V~~~~ 36 (250)
T 1yo6_A 4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATA 36 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEE
T ss_pred CEEEEecCCchHHHHHHHHHHhcCCCcEEEEEe
Confidence 4799999999999999999997653 5666654
No 376
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=91.37 E-value=0.19 Score=47.64 Aligned_cols=34 Identities=21% Similarity=0.306 Sum_probs=26.9
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEec
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTA 96 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s 96 (406)
++++|.|.||||++|+.|++.|.+.. .+++.+..
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 46 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKG-YRVHGLVA 46 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCC-CeEEEEeC
Confidence 34789999999999999999998754 57777653
No 377
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=91.35 E-value=0.16 Score=49.56 Aligned_cols=72 Identities=15% Similarity=0.202 Sum_probs=41.9
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCc-eEEEEeccCc---CCcc--ccccccCccccCCCcccccCcccCCCCCEEEEc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYF-GIKLMTADRK---AGQS--IGSVFPHLISQDLPTMVAVKDADFSNVDAVFCC 136 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~-elv~l~s~~~---~G~~--i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~a 136 (406)
++||+|+|| |.+|..++..|...+.+ +++.+ +... .|.. +....+.+. ... +..-+.+++.++|+||.+
T Consensus 9 ~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~-D~~~~k~~g~a~DL~~~~~~~~--~~~-i~~~~~~a~~~aDiVvi~ 83 (326)
T 3vku_A 9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIV-DIFKDKTKGDAIDLEDALPFTS--PKK-IYSAEYSDAKDADLVVIT 83 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEE-CSCHHHHHHHHHHHHTTGGGSC--CCE-EEECCGGGGTTCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEE-eCChHHHHHHHhhHhhhhhhcC--CcE-EEECcHHHhcCCCEEEEC
Confidence 368999995 99999999998876655 55554 3321 1211 111111111 111 111124467899999999
Q ss_pred CCC
Q 015441 137 LPH 139 (406)
Q Consensus 137 l~~ 139 (406)
.+.
T Consensus 84 ag~ 86 (326)
T 3vku_A 84 AGA 86 (326)
T ss_dssp CCC
T ss_pred CCC
Confidence 874
No 378
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=91.32 E-value=0.17 Score=48.04 Aligned_cols=32 Identities=9% Similarity=0.375 Sum_probs=26.1
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
|++|.|.||||++|+.|++.|++.. .+++.+.
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~ 32 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQG-IDLIVFD 32 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCC-CEEEEEe
Confidence 4589999999999999999998753 5776664
No 379
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=91.31 E-value=0.11 Score=50.60 Aligned_cols=72 Identities=15% Similarity=0.218 Sum_probs=41.4
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCc-eEEEEeccCc---CCcc--ccccccCccccCCCcccccCcccCCCCCEEEEc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYF-GIKLMTADRK---AGQS--IGSVFPHLISQDLPTMVAVKDADFSNVDAVFCC 136 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~-elv~l~s~~~---~G~~--i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~a 136 (406)
++||+|+|| |.+|..++-+|...+.+ |++.+ +... .|.. +....+.+ .+.. +..-+.+++.++|+|+.+
T Consensus 9 ~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~-Di~~~~~~g~~~dl~~~~~~~--~~~~-i~~~~~~a~~~aDvVii~ 83 (326)
T 2zqz_A 9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIV-DIFKDKTKGDAIDLSNALPFT--SPKK-IYSAEYSDAKDADLVVIT 83 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEE-CSCHHHHHHHHHHHHTTGGGS--CCCE-EEECCGGGGGGCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEE-eCCchHhHHHHHHHHHHHHhc--CCeE-EEECCHHHhCCCCEEEEc
Confidence 369999997 99999999988865544 45554 4321 1211 11111111 1111 111124457899999999
Q ss_pred CCC
Q 015441 137 LPH 139 (406)
Q Consensus 137 l~~ 139 (406)
.+.
T Consensus 84 ag~ 86 (326)
T 2zqz_A 84 AGA 86 (326)
T ss_dssp CCC
T ss_pred CCC
Confidence 874
No 380
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=91.18 E-value=0.15 Score=49.55 Aligned_cols=73 Identities=22% Similarity=0.346 Sum_probs=40.7
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc-----CCccccccccC-ccccCCCccc-ccCcccCCCCCEEEE
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK-----AGQSIGSVFPH-LISQDLPTMV-AVKDADFSNVDAVFC 135 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~-----~G~~i~~v~p~-l~~~~~~~~~-~~~~~~~~~vDvVF~ 135 (406)
+.||+|+|| |.+|..++..|...+.-+++.+ +... .|...+..+.. +..... .+. ..+.+++.++|+||.
T Consensus 8 ~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~-D~~~~~~~~~g~a~dl~~~~~~~~~~~-~i~~t~d~~a~~~aDvVIi 84 (315)
T 3tl2_A 8 RKKVSVIGA-GFTGATTAFLLAQKELADVVLV-DIPQLENPTKGKALDMLEASPVQGFDA-NIIGTSDYADTADSDVVVI 84 (315)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEE-CCGGGHHHHHHHHHHHHHHHHHHTCCC-CEEEESCGGGGTTCSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEE-eccchHHHHHHhhhhHHHhhhhccCCC-EEEEcCCHHHhCCCCEEEE
Confidence 358999996 9999999998886543255554 3321 12211111100 000011 111 122456789999999
Q ss_pred cCC
Q 015441 136 CLP 138 (406)
Q Consensus 136 al~ 138 (406)
+.+
T Consensus 85 aag 87 (315)
T 3tl2_A 85 TAG 87 (315)
T ss_dssp CCS
T ss_pred eCC
Confidence 975
No 381
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=91.15 E-value=0.15 Score=48.93 Aligned_cols=93 Identities=14% Similarity=0.105 Sum_probs=51.1
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc-CCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK-AGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~-~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s 142 (406)
.+|.|+|+ |-+|+.+++.|......+++.+ +++. ..+.+...+....+ .......+ .+.+.++|+|+.|+|.+..
T Consensus 142 ~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~-nR~~~ka~~la~~~~~~~~-~~~~~~~~-~~~~~~aDivIn~t~~~~~ 217 (297)
T 2egg_A 142 KRILVIGA-GGGARGIYFSLLSTAAERIDMA-NRTVEKAERLVREGDERRS-AYFSLAEA-ETRLAEYDIIINTTSVGMH 217 (297)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTCSEEEEE-CSSHHHHHHHHHHSCSSSC-CEECHHHH-HHTGGGCSEEEECSCTTCS
T ss_pred CEEEEECc-HHHHHHHHHHHHHCCCCEEEEE-eCCHHHHHHHHHHhhhccC-ceeeHHHH-HhhhccCCEEEECCCCCCC
Confidence 47999995 7899999999987654355544 4332 11111111100000 00001111 1234679999999997764
Q ss_pred HH----HHh--hCCCCCEEEEcCC
Q 015441 143 QE----IIK--GLPKSLKIVDLSA 160 (406)
Q Consensus 143 ~~----~~~--~l~~G~~VIDlSa 160 (406)
.. ..+ .+..|..|+|++-
T Consensus 218 ~~~~~~~i~~~~l~~~~~v~D~~y 241 (297)
T 2egg_A 218 PRVEVQPLSLERLRPGVIVSDIIY 241 (297)
T ss_dssp SCCSCCSSCCTTCCTTCEEEECCC
T ss_pred CCCCCCCCCHHHcCCCCEEEEcCC
Confidence 21 111 2456788999874
No 382
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=91.11 E-value=0.2 Score=53.22 Aligned_cols=32 Identities=19% Similarity=0.320 Sum_probs=26.6
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
+++|.|.||||++|+.|++.|++.. .+++.+.
T Consensus 11 ~~~ilVTGatG~IG~~l~~~L~~~G-~~V~~~~ 42 (699)
T 1z45_A 11 SKIVLVTGGAGYIGSHTVVELIENG-YDCVVAD 42 (699)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCc-CEEEEEE
Confidence 3689999999999999999998754 5776664
No 383
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=90.87 E-value=0.34 Score=46.42 Aligned_cols=73 Identities=16% Similarity=0.246 Sum_probs=49.6
Q ss_pred cEEEEECcccHHHHHHHHHHHcCC-CceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc--
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHP-YFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG-- 140 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp-~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~-- 140 (406)
.++.|+|++..+|+-+.++|.+.. ...+....++ . .++ .+...++|+||.|++..
T Consensus 159 k~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~-t--------------~~L-------~~~~~~ADIVI~Avg~p~~ 216 (281)
T 2c2x_A 159 AHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTG-T--------------RDL-------PALTRQADIVVAAVGVAHL 216 (281)
T ss_dssp CEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTT-C--------------SCH-------HHHHTTCSEEEECSCCTTC
T ss_pred CEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECc-h--------------hHH-------HHHHhhCCEEEECCCCCcc
Confidence 589999998899999999998763 4555443221 1 111 12235789999999843
Q ss_pred chHHHHhhCCCCCEEEEcCCc
Q 015441 141 TTQEIIKGLPKSLKIVDLSAD 161 (406)
Q Consensus 141 ~s~~~~~~l~~G~~VIDlSa~ 161 (406)
+..++ ++.|..|||.+-+
T Consensus 217 I~~~~---vk~GavVIDVgi~ 234 (281)
T 2c2x_A 217 LTADM---VRPGAAVIDVGVS 234 (281)
T ss_dssp BCGGG---SCTTCEEEECCEE
T ss_pred cCHHH---cCCCcEEEEccCC
Confidence 22333 4669999999875
No 384
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.70 E-value=0.16 Score=43.08 Aligned_cols=76 Identities=8% Similarity=0.055 Sum_probs=41.7
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-Ccccccc----ccCccccCCCcccccCcccCCCCCEEEEcCC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSV----FPHLISQDLPTMVAVKDADFSNVDAVFCCLP 138 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v----~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~ 138 (406)
.+|.|+| .|.+|+.+++.|.... .+++.+..+... -+.+... ...+.+ +......+....+.++|+|+.|++
T Consensus 4 ~~vlI~G-~G~vG~~la~~L~~~g-~~V~vid~~~~~~~~~~~~~~~~~~~~i~g-d~~~~~~l~~a~i~~ad~vi~~~~ 80 (153)
T 1id1_A 4 DHFIVCG-HSILAINTILQLNQRG-QNVTVISNLPEDDIKQLEQRLGDNADVIPG-DSNDSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp SCEEEEC-CSHHHHHHHHHHHHTT-CCEEEEECCCHHHHHHHHHHHCTTCEEEES-CTTSHHHHHHHTTTTCSEEEECSS
T ss_pred CcEEEEC-CCHHHHHHHHHHHHCC-CCEEEEECCChHHHHHHHHhhcCCCeEEEc-CCCCHHHHHHcChhhCCEEEEecC
Confidence 4799999 5999999999998643 466666432110 0011110 000111 111111121223578999999998
Q ss_pred Ccch
Q 015441 139 HGTT 142 (406)
Q Consensus 139 ~~~s 142 (406)
....
T Consensus 81 ~d~~ 84 (153)
T 1id1_A 81 NDAD 84 (153)
T ss_dssp CHHH
T ss_pred ChHH
Confidence 7654
No 385
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=90.68 E-value=0.22 Score=48.49 Aligned_cols=73 Identities=18% Similarity=0.242 Sum_probs=41.0
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC---Cc--cccccccCccccCCCcccc-cCcccCCCCCEEEE
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA---GQ--SIGSVFPHLISQDLPTMVA-VKDADFSNVDAVFC 135 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~---G~--~i~~v~p~l~~~~~~~~~~-~~~~~~~~vDvVF~ 135 (406)
|++||+|+|| |.+|..+..+|+....++ +.+.+.... +. .+......+ .... .+.. .+.+++.++|+||.
T Consensus 13 ~~~kI~ViGa-G~vG~~iA~~la~~g~~~-V~L~Di~~~~l~~~~~~l~~~~~~~-~~~~-~i~~t~d~~al~~aD~VI~ 88 (328)
T 2hjr_A 13 MRKKISIIGA-GQIGSTIALLLGQKDLGD-VYMFDIIEGVPQGKALDLNHCMALI-GSPA-KIFGENNYEYLQNSDVVII 88 (328)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCCE-EEEECSSTTHHHHHHHHHHHHHHHH-TCCC-CEEEESCGGGGTTCSEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCe-EEEEECCHHHHHHHHHHHHhHhhcc-CCCC-EEEECCCHHHHCCCCEEEE
Confidence 3469999996 999999999998765556 444443321 10 111100000 0010 1111 22345689999999
Q ss_pred cCC
Q 015441 136 CLP 138 (406)
Q Consensus 136 al~ 138 (406)
+.+
T Consensus 89 avg 91 (328)
T 2hjr_A 89 TAG 91 (328)
T ss_dssp CCS
T ss_pred cCC
Confidence 984
No 386
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=90.67 E-value=0.2 Score=48.90 Aligned_cols=35 Identities=17% Similarity=0.403 Sum_probs=26.4
Q ss_pred cCCccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 60 SEKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 60 ~~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
-+++.+|.|.||||++|+.|++.|++.. .+++.+.
T Consensus 8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G-~~V~~~~ 42 (404)
T 1i24_A 8 HHHGSRVMVIGGDGYCGWATALHLSKKN-YEVCIVD 42 (404)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred ccCCCeEEEeCCCcHHHHHHHHHHHhCC-CeEEEEE
Confidence 3557899999999999999999998653 5776664
No 387
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=90.63 E-value=0.16 Score=45.77 Aligned_cols=32 Identities=9% Similarity=0.131 Sum_probs=25.8
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
..+|.|.||+|.+|+++++.|.++. .+++.+.
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G-~~V~~~~ 33 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARG-YRVVVLD 33 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHT-CEEEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEc
Confidence 3579999999999999999998653 4665554
No 388
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=90.60 E-value=0.22 Score=47.99 Aligned_cols=32 Identities=19% Similarity=0.470 Sum_probs=24.4
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEE
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLM 94 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l 94 (406)
+++||+|+|| |.+|..+...|......+++.+
T Consensus 3 ~~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~ 34 (317)
T 2ewd_A 3 ERRKIAVIGS-GQIGGNIAYIVGKDNLADVVLF 34 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEE
Confidence 3469999996 9999999999986544464444
No 389
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=90.60 E-value=0.33 Score=48.71 Aligned_cols=80 Identities=20% Similarity=0.282 Sum_probs=54.8
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCc--eEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcC---
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYF--GIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCL--- 137 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~--elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al--- 137 (406)
..||.|+||+|.+|+.-++.+...... ++..+ +.+..-+ +..+ +.+.++|+||-|.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~-D~~~~~~----------g~~~--------~~i~~aDivIn~vlig 274 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKW-DIKETSR----------GGPF--------DEIPQADIFINCIYLS 274 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEE-CHHHHTT----------CSCC--------THHHHSSEEEECCCCC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEe-ecccccc----------CCch--------hhHhhCCEEEECcCcC
Confidence 468999999999999999999876532 44333 3221000 1111 1123679998885
Q ss_pred ---CCcchHHHHhhC-CCCCEEEEcCCc
Q 015441 138 ---PHGTTQEIIKGL-PKSLKIVDLSAD 161 (406)
Q Consensus 138 ---~~~~s~~~~~~l-~~G~~VIDlSa~ 161 (406)
|.-++++.++.. ..|.+|||+|.|
T Consensus 275 ~~aP~Lvt~e~v~~m~k~gsVIVDVA~D 302 (394)
T 2qrj_A 275 KPIAPFTNMEKLNNPNRRLRTVVDVSAD 302 (394)
T ss_dssp SSCCCSCCHHHHCCTTCCCCEEEETTCC
T ss_pred CCCCcccCHHHHhcCcCCCeEEEEEecC
Confidence 566788888888 779999999987
No 390
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=90.40 E-value=0.2 Score=49.09 Aligned_cols=75 Identities=12% Similarity=0.090 Sum_probs=40.9
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCc-eEEEEeccCc---CCcccccccc-CccccCCCcccccCcccCCCCCEEEEc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYF-GIKLMTADRK---AGQSIGSVFP-HLISQDLPTMVAVKDADFSNVDAVFCC 136 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~-elv~l~s~~~---~G~~i~~v~p-~l~~~~~~~~~~~~~~~~~~vDvVF~a 136 (406)
...||+|+|| |.+|..++..|+..+.. +++.+ +... .|...+-.|. .+.. ........+.+++.++|+||.+
T Consensus 18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~-Di~~~~~~g~a~DL~~~~~~~~-~~~i~~~~d~~~~~~aDiVvi~ 94 (331)
T 4aj2_A 18 PQNKITVVGV-GAVGMACAISILMKDLADELALV-DVIEDKLKGEMMDLQHGSLFLK-TPKIVSSKDYSVTANSKLVIIT 94 (331)
T ss_dssp CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEE-CSCHHHHHHHHHHHHHTGGGCS-CCEEEECSSGGGGTTEEEEEEC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEE-eCChHHHHHHHHhhhhhhhccC-CCeEEEcCCHHHhCCCCEEEEc
Confidence 3469999996 99999999888766544 55554 3221 2211111110 0110 0000111223457899999998
Q ss_pred CCC
Q 015441 137 LPH 139 (406)
Q Consensus 137 l~~ 139 (406)
.+.
T Consensus 95 aG~ 97 (331)
T 4aj2_A 95 AGA 97 (331)
T ss_dssp CSC
T ss_pred cCC
Confidence 763
No 391
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.39 E-value=0.27 Score=47.23 Aligned_cols=71 Identities=11% Similarity=0.220 Sum_probs=39.0
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCc-eEEEEeccCc---CCcccc--ccccCccccCCCcccccCcccCCCCCEEEEcC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYF-GIKLMTADRK---AGQSIG--SVFPHLISQDLPTMVAVKDADFSNVDAVFCCL 137 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~-elv~l~s~~~---~G~~i~--~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al 137 (406)
+||+|+|| |.+|..++..|...... +++.+ +... .|...+ ...+.+ .... +...+.+++.++|+||.|.
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~-D~~~~~~~~~~~~l~~~~~~~--~~~~-i~~~~~~a~~~aDvVIi~~ 75 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLV-DRDEDRAQAEAEDIAHAAPVS--HGTR-VWHGGHSELADAQVVILTA 75 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEE-CSSHHHHHHHHHHHTTSCCTT--SCCE-EEEECGGGGTTCSEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEE-eCCHHHHHHHHHhhhhhhhhc--CCeE-EEECCHHHhCCCCEEEEcC
Confidence 48999997 99999999988865433 55555 3321 111111 111101 0111 1111234568999999999
Q ss_pred CC
Q 015441 138 PH 139 (406)
Q Consensus 138 ~~ 139 (406)
+.
T Consensus 76 ~~ 77 (304)
T 2v6b_A 76 GA 77 (304)
T ss_dssp --
T ss_pred CC
Confidence 64
No 392
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=90.34 E-value=0.27 Score=45.93 Aligned_cols=31 Identities=26% Similarity=0.458 Sum_probs=25.9
Q ss_pred EEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 65 RIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 65 kVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
||.|.||||++|+.|++.|.+....+++.+.
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~ 31 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVD 31 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEE
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEc
Confidence 5899999999999999999876545676664
No 393
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=89.88 E-value=0.4 Score=42.05 Aligned_cols=30 Identities=27% Similarity=0.334 Sum_probs=25.3
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
+||.|.||+|.+|+++++.|. + ..+++.+.
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~-g~~V~~~~ 33 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-K-KAEVITAG 33 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-T-TSEEEEEE
T ss_pred cEEEEEcCCcHHHHHHHHHHH-C-CCeEEEEe
Confidence 479999999999999999998 5 56776654
No 394
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=89.82 E-value=0.32 Score=47.48 Aligned_cols=89 Identities=16% Similarity=0.171 Sum_probs=50.8
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc-----CCccccc-cccCccccCCCcc--cccCcccCCCCCEEEE
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK-----AGQSIGS-VFPHLISQDLPTM--VAVKDADFSNVDAVFC 135 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~-----~G~~i~~-v~p~l~~~~~~~~--~~~~~~~~~~vDvVF~ 135 (406)
.+|.|+|++..+|+-+.++|.+.- .+++ +.+++. .+..+.. .+. ....... .++ .+...++|+||.
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~g-AtVt-v~nR~~~~l~~ra~~la~~~~~---~t~~~~t~~~~L-~e~l~~ADIVIs 251 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLANDG-ATVY-SVDVNNIQKFTRGESLKLNKHH---VEDLGEYSEDLL-KKCSLDSDVVIT 251 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTS-CEEE-EECSSEEEEEESCCCSSCCCCE---EEEEEECCHHHH-HHHHHHCSEEEE
T ss_pred CEEEEECCCcchHHHHHHHHHHCC-CEEE-EEeCchHHHHhHHHHHhhhccc---ccccccccHhHH-HHHhccCCEEEE
Confidence 589999988889999999998754 4543 443321 1111110 000 0000000 111 122357999999
Q ss_pred cCCCc---chHHHHhhCCCCCEEEEcCCc
Q 015441 136 CLPHG---TTQEIIKGLPKSLKIVDLSAD 161 (406)
Q Consensus 136 al~~~---~s~~~~~~l~~G~~VIDlSa~ 161 (406)
|++.. +..++ ++.|..|||++.+
T Consensus 252 Atg~p~~vI~~e~---vk~GavVIDVgi~ 277 (320)
T 1edz_A 252 GVPSENYKFPTEY---IKEGAVCINFACT 277 (320)
T ss_dssp CCCCTTCCBCTTT---SCTTEEEEECSSS
T ss_pred CCCCCcceeCHHH---cCCCeEEEEcCCC
Confidence 99863 33333 4568999999875
No 395
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.79 E-value=0.25 Score=43.04 Aligned_cols=77 Identities=18% Similarity=0.081 Sum_probs=40.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCcccccc-ccCccccCCCcccccCcc-cCCCCCEEEEcCCCcc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSV-FPHLISQDLPTMVAVKDA-DFSNVDAVFCCLPHGT 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v-~p~l~~~~~~~~~~~~~~-~~~~vDvVF~al~~~~ 141 (406)
.+|+|+| .|.+|+.+++.|......+++.+..+...-..+... ...+.+ +......+... .+.++|+||.|++...
T Consensus 40 ~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~g-d~~~~~~l~~~~~~~~ad~vi~~~~~~~ 117 (183)
T 3c85_A 40 AQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISG-DATDPDFWERILDTGHVKLVLLAMPHHQ 117 (183)
T ss_dssp CSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEEC-CTTCHHHHHTBCSCCCCCEEEECCSSHH
T ss_pred CcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEc-CCCCHHHHHhccCCCCCCEEEEeCCChH
Confidence 4799999 799999999999754124565554321110111100 000011 11111111111 2467999999999754
Q ss_pred h
Q 015441 142 T 142 (406)
Q Consensus 142 s 142 (406)
.
T Consensus 118 ~ 118 (183)
T 3c85_A 118 G 118 (183)
T ss_dssp H
T ss_pred H
Confidence 4
No 396
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=89.78 E-value=0.15 Score=46.03 Aligned_cols=78 Identities=17% Similarity=0.274 Sum_probs=42.9
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCcccccc--ccCccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSV--FPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v--~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
|||.|+| .|.+|+.+++.|.+. ..+++.+..+...-+.+... ...+.+ +......+....+.++|+|+.|++...
T Consensus 1 M~iiIiG-~G~~G~~la~~L~~~-g~~v~vid~~~~~~~~l~~~~~~~~i~g-d~~~~~~l~~a~i~~ad~vi~~~~~d~ 77 (218)
T 3l4b_C 1 MKVIIIG-GETTAYYLARSMLSR-KYGVVIINKDRELCEEFAKKLKATIIHG-DGSHKEILRDAEVSKNDVVVILTPRDE 77 (218)
T ss_dssp CCEEEEC-CHHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHHSSSEEEES-CTTSHHHHHHHTCCTTCEEEECCSCHH
T ss_pred CEEEEEC-CCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHHcCCeEEEc-CCCCHHHHHhcCcccCCEEEEecCCcH
Confidence 4799999 599999999999864 34666664322111111100 000111 111111121223568999999999876
Q ss_pred hHH
Q 015441 142 TQE 144 (406)
Q Consensus 142 s~~ 144 (406)
...
T Consensus 78 ~n~ 80 (218)
T 3l4b_C 78 VNL 80 (218)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 397
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=89.65 E-value=0.39 Score=48.74 Aligned_cols=94 Identities=19% Similarity=0.244 Sum_probs=53.1
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc------CCccccccccCccc---c--CCCcccccCcccCCCCCE
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK------AGQSIGSVFPHLIS---Q--DLPTMVAVKDADFSNVDA 132 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~------~G~~i~~v~p~l~~---~--~~~~~~~~~~~~~~~vDv 132 (406)
.|.-|+| +||+|.-+...|++.- .+++.+.-+.. .|. .....|.+.. . .-..+... .+..++|+
T Consensus 12 ~~~~ViG-lGyvGlp~A~~La~~G-~~V~~~D~~~~kv~~L~~g~-~pi~epgl~~ll~~~~~~g~l~~t--td~~~aDv 86 (431)
T 3ojo_A 12 SKLTVVG-LGYIGLPTSIMFAKHG-VDVLGVDINQQTIDKLQNGQ-ISIEEPGLQEVYEEVLSSGKLKVS--TTPEASDV 86 (431)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTT-CEEEEECSCHHHHHHHHTTC-CSSCCTTHHHHHHHHHHTTCEEEE--SSCCCCSE
T ss_pred CccEEEe-eCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHCCC-CCcCCCCHHHHHHhhcccCceEEe--CchhhCCE
Confidence 5799999 9999999999998753 46666632211 111 0001111100 0 00001111 12457999
Q ss_pred EEEcCCCcch----------------HHHHhhCCCCCEEEEcCCcc
Q 015441 133 VFCCLPHGTT----------------QEIIKGLPKSLKIVDLSADF 162 (406)
Q Consensus 133 VF~al~~~~s----------------~~~~~~l~~G~~VIDlSa~f 162 (406)
+|.|+|+... ..+.+.+..|..|||.|.-.
T Consensus 87 vii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~ 132 (431)
T 3ojo_A 87 FIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIA 132 (431)
T ss_dssp EEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCC
T ss_pred EEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCC
Confidence 9999997652 12333456788999988753
No 398
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=89.63 E-value=0.36 Score=46.46 Aligned_cols=31 Identities=29% Similarity=0.414 Sum_probs=24.1
Q ss_pred cEEEEECcccHHHHHHHHHHHcCC-CceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHP-YFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp-~~elv~l~ 95 (406)
+||+|+|| |++|..+...|.... ..+++.+.
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D 32 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLD 32 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEe
Confidence 48999997 999999999988653 45665553
No 399
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=89.31 E-value=1.1 Score=45.59 Aligned_cols=96 Identities=14% Similarity=0.145 Sum_probs=53.3
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC----Cc-cccccccC------cccc---C-CCcccccCcccC
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA----GQ-SIGSVFPH------LISQ---D-LPTMVAVKDADF 127 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~----G~-~i~~v~p~------l~~~---~-~~~~~~~~~~~~ 127 (406)
+.||+|+| .|.+|..+...|...- ++++.+ +++.. +. .+...... +... . ...+ ..+.+.+
T Consensus 37 ~~kV~VIG-aG~MG~~iA~~la~~G-~~V~l~-D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~~ 112 (463)
T 1zcj_A 37 VSSVGVLG-LGTMGRGIAISFARVG-ISVVAV-ESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKEL 112 (463)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHTTT-CEEEEE-CSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGGG
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhCC-CeEEEE-ECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHHH
Confidence 45899999 7999999999998653 465544 33211 00 00000000 0000 0 0001 1122345
Q ss_pred CCCCEEEEcCCCcch--HHHH----hhCCCCCEEEEcCCcc
Q 015441 128 SNVDAVFCCLPHGTT--QEII----KGLPKSLKIVDLSADF 162 (406)
Q Consensus 128 ~~vDvVF~al~~~~s--~~~~----~~l~~G~~VIDlSa~f 162 (406)
.++|+||.|++.... +++. +.+..++.|+++++..
T Consensus 113 ~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~ 153 (463)
T 1zcj_A 113 STVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSAL 153 (463)
T ss_dssp TTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCc
Confidence 789999999997643 2232 2345688888877765
No 400
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=89.12 E-value=0.39 Score=45.77 Aligned_cols=88 Identities=14% Similarity=0.136 Sum_probs=46.3
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s 142 (406)
.+|.|+|| |-+|+.++..|.....-++..+ +|+.. .+.+.. .+.... +.++ .+...++|+||.|+|.+..
T Consensus 118 k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~-~R~~~~a~~la~---~~~~~~---~~~~-~~~~~~aDiVInaTp~Gm~ 188 (277)
T 3don_A 118 AYILILGA-GGASKGIANELYKIVRPTLTVA-NRTMSRFNNWSL---NINKIN---LSHA-ESHLDEFDIIINTTPAGMN 188 (277)
T ss_dssp CCEEEECC-SHHHHHHHHHHHTTCCSCCEEE-CSCGGGGTTCCS---CCEEEC---HHHH-HHTGGGCSEEEECCC----
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCCEEEEE-eCCHHHHHHHHH---hccccc---HhhH-HHHhcCCCEEEECccCCCC
Confidence 47999995 8889999999987543345443 43321 111111 010000 1111 1123578999999998754
Q ss_pred HHHH---h--hCCCCCEEEEcCC
Q 015441 143 QEII---K--GLPKSLKIVDLSA 160 (406)
Q Consensus 143 ~~~~---~--~l~~G~~VIDlSa 160 (406)
.... + .+..+..|+|++.
T Consensus 189 ~~~~~~l~~~~l~~~~~V~D~vY 211 (277)
T 3don_A 189 GNTDSVISLNRLASHTLVSDIVY 211 (277)
T ss_dssp ---CCSSCCTTCCSSCEEEESCC
T ss_pred CCCcCCCCHHHcCCCCEEEEecC
Confidence 3321 1 2356778899874
No 401
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=89.07 E-value=0.68 Score=42.15 Aligned_cols=31 Identities=19% Similarity=0.131 Sum_probs=25.1
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
.+|.|.||+|.+|+++++.|++.. .+++.+.
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G-~~V~~~~ 32 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAG-HQIVGID 32 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 479999999999999999998754 4655543
No 402
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=89.06 E-value=0.29 Score=47.24 Aligned_cols=71 Identities=18% Similarity=0.207 Sum_probs=40.4
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCc-eEEEEeccCc---CCc--cccccccCccccCCCcccccCcccCCCCCEEEEcC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYF-GIKLMTADRK---AGQ--SIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCL 137 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~-elv~l~s~~~---~G~--~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al 137 (406)
+||+|+|| |.+|..++-+|...+-+ |++.+ +... .|. .+....+.+ .+.. +..-+.+++.++|+|+.+.
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~-Di~~~k~~g~a~dl~~~~~~~--~~~~-v~~~~~~a~~~aD~Vii~a 75 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGVAREVVLV-DLDRKLAQAHAEDILHATPFA--HPVW-VWAGSYGDLEGARAVVLAA 75 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEE-CSSHHHHHHHHHHHHTTGGGS--CCCE-EEECCGGGGTTEEEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEE-eCChhHHHHHHHHHHHhHhhc--CCeE-EEECCHHHhCCCCEEEECC
Confidence 48999997 99999999988865433 56555 3321 111 111111101 1111 1111344578999999988
Q ss_pred CC
Q 015441 138 PH 139 (406)
Q Consensus 138 ~~ 139 (406)
+.
T Consensus 76 g~ 77 (310)
T 2xxj_A 76 GV 77 (310)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 403
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=88.95 E-value=0.62 Score=44.23 Aligned_cols=84 Identities=13% Similarity=0.122 Sum_probs=50.1
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s 142 (406)
.+|.|+| +|-+|+.++..|...- .++..+ +|+.. .+.+. .+. .. ... .+++.++|+||.|+|.+..
T Consensus 119 k~vlvlG-aGGaaraia~~L~~~G-~~v~V~-nRt~~ka~~la----~~~---~~-~~~--~~~l~~~DiVInaTp~Gm~ 185 (269)
T 3phh_A 119 QNALILG-AGGSAKALACELKKQG-LQVSVL-NRSSRGLDFFQ----RLG---CD-CFM--EPPKSAFDLIINATSASLH 185 (269)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEE-CSSCTTHHHHH----HHT---CE-EES--SCCSSCCSEEEECCTTCCC
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCC-CEEEEE-eCCHHHHHHHH----HCC---Ce-Eec--HHHhccCCEEEEcccCCCC
Confidence 5899999 5999999999998766 666544 44321 11111 111 00 111 1223478999999997743
Q ss_pred H------HHHh-hCCCCCEEEEcCC
Q 015441 143 Q------EIIK-GLPKSLKIVDLSA 160 (406)
Q Consensus 143 ~------~~~~-~l~~G~~VIDlSa 160 (406)
. +.+. .+..+..|+|+..
T Consensus 186 ~~~~l~~~~l~~~l~~~~~v~D~vY 210 (269)
T 3phh_A 186 NELPLNKEVLKGYFKEGKLAYDLAY 210 (269)
T ss_dssp CSCSSCHHHHHHHHHHCSEEEESCC
T ss_pred CCCCCChHHHHhhCCCCCEEEEeCC
Confidence 2 2111 2345778999874
No 404
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=88.84 E-value=0.48 Score=44.50 Aligned_cols=89 Identities=16% Similarity=0.288 Sum_probs=49.1
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccC--CCCCEEEEcCCCc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCCLPHG 140 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~al~~~ 140 (406)
.+|.|+|| |-+|+.+++.|.... .+++.+ +++.. .+.+...+... + .. ...+.+++ .++|+++.|+|.+
T Consensus 120 k~vlViGa-Gg~g~a~a~~L~~~G-~~V~v~-~R~~~~~~~la~~~~~~-~-~~---~~~~~~~~~~~~~DivVn~t~~~ 191 (271)
T 1nyt_A 120 LRILLIGA-GGASRGVLLPLLSLD-CAVTIT-NRTVSRAEELAKLFAHT-G-SI---QALSMDELEGHEFDLIINATSSG 191 (271)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-CEEEEE-CSSHHHHHHHHHHTGGG-S-SE---EECCSGGGTTCCCSEEEECCSCG
T ss_pred CEEEEECC-cHHHHHHHHHHHHcC-CEEEEE-ECCHHHHHHHHHHhhcc-C-Ce---eEecHHHhccCCCCEEEECCCCC
Confidence 47999997 779999999998765 565544 43321 11111111100 0 00 00111112 4799999999976
Q ss_pred chHH---HHhh-CCCCCEEEEcCC
Q 015441 141 TTQE---IIKG-LPKSLKIVDLSA 160 (406)
Q Consensus 141 ~s~~---~~~~-l~~G~~VIDlSa 160 (406)
.... +.+. +..+..|+|++-
T Consensus 192 ~~~~~~~i~~~~l~~~~~v~D~~y 215 (271)
T 1nyt_A 192 ISGDIPAIPSSLIHPGIYCYDMFY 215 (271)
T ss_dssp GGTCCCCCCGGGCCTTCEEEESCC
T ss_pred CCCCCCCCCHHHcCCCCEEEEecc
Confidence 5422 1112 355778888754
No 405
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=88.79 E-value=0.46 Score=45.56 Aligned_cols=72 Identities=17% Similarity=0.240 Sum_probs=48.5
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc--c
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG--T 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~--~ 141 (406)
.++.|+|++|.+|+-+..+|.+. ..+++...+ +. .++ .+...++|+||.|+|.. +
T Consensus 162 k~vvVIG~s~iVG~p~A~lL~~~-gAtVtv~hs-~t--------------~~L-------~~~~~~ADIVI~Avg~p~~I 218 (285)
T 3l07_A 162 AYAVVVGASNVVGKPVSQLLLNA-KATVTTCHR-FT--------------TDL-------KSHTTKADILIVAVGKPNFI 218 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT-TCEEEEECT-TC--------------SSH-------HHHHTTCSEEEECCCCTTCB
T ss_pred CEEEEECCCchhHHHHHHHHHHC-CCeEEEEeC-Cc--------------hhH-------HHhcccCCEEEECCCCCCCC
Confidence 58999999999999999999875 345433322 10 011 11235789999999742 2
Q ss_pred hHHHHhhCCCCCEEEEcCCc
Q 015441 142 TQEIIKGLPKSLKIVDLSAD 161 (406)
Q Consensus 142 s~~~~~~l~~G~~VIDlSa~ 161 (406)
..+ .++.|..|||.+-+
T Consensus 219 ~~~---~vk~GavVIDvgi~ 235 (285)
T 3l07_A 219 TAD---MVKEGAVVIDVGIN 235 (285)
T ss_dssp CGG---GSCTTCEEEECCCE
T ss_pred CHH---HcCCCcEEEEeccc
Confidence 222 24679999999865
No 406
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=88.72 E-value=0.4 Score=45.33 Aligned_cols=31 Identities=23% Similarity=0.309 Sum_probs=26.0
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
++|.|.||||++|+.|++.|.+.. .+++.+.
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~ 34 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKG-YEVYGAD 34 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-CEEEEEE
Confidence 579999999999999999998753 5776664
No 407
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=88.59 E-value=0.22 Score=47.28 Aligned_cols=94 Identities=14% Similarity=0.159 Sum_probs=51.7
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccC-CCCCEEEEcCCCc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADF-SNVDAVFCCLPHG 140 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~-~~vDvVF~al~~~ 140 (406)
|++||+|+| .|.+|..+...|.+.. .++..+. ++..+..+......+ ... +.....+.. .++|+||+|++..
T Consensus 1 M~mkI~iiG-aGa~G~~~a~~L~~~g-~~V~~~~-r~~~~~~~~~~~g~~---~~~-~~~~~~~~~~~~~D~vilavk~~ 73 (294)
T 3g17_A 1 MSLSVAIIG-PGAVGTTIAYELQQSL-PHTTLIG-RHAKTITYYTVPHAP---AQD-IVVKGYEDVTNTFDVIIIAVKTH 73 (294)
T ss_dssp --CCEEEEC-CSHHHHHHHHHHHHHC-TTCEEEE-SSCEEEEEESSTTSC---CEE-EEEEEGGGCCSCEEEEEECSCGG
T ss_pred CCcEEEEEC-CCHHHHHHHHHHHHCC-CeEEEEE-eccCcEEEEecCCee---ccc-eecCchHhcCCCCCEEEEeCCcc
Confidence 457999999 8999999999887422 2444443 332221111111000 000 111012223 5789999999988
Q ss_pred chHHHHhhC----CCCCEEEEcCCcc
Q 015441 141 TTQEIIKGL----PKSLKIVDLSADF 162 (406)
Q Consensus 141 ~s~~~~~~l----~~G~~VIDlSa~f 162 (406)
...+.++.+ ..+..||.+..-+
T Consensus 74 ~~~~~l~~l~~~l~~~~~iv~~~nGi 99 (294)
T 3g17_A 74 QLDAVIPHLTYLAHEDTLIILAQNGY 99 (294)
T ss_dssp GHHHHGGGHHHHEEEEEEEEECCSSC
T ss_pred CHHHHHHHHHHhhCCCCEEEEeccCc
Confidence 776666543 3456777766544
No 408
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=88.43 E-value=0.34 Score=44.52 Aligned_cols=35 Identities=29% Similarity=0.447 Sum_probs=25.9
Q ss_pred cCCccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 60 SEKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 60 ~~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
..|..+|.|.||+|.+|+++++.|.++- .+++.+.
T Consensus 19 ~~m~k~vlITGas~gIG~~la~~l~~~G-~~V~~~~ 53 (251)
T 3orf_A 19 SHMSKNILVLGGSGALGAEVVKFFKSKS-WNTISID 53 (251)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 3445689999999999999999998764 4555553
No 409
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=88.23 E-value=0.45 Score=47.12 Aligned_cols=32 Identities=16% Similarity=0.302 Sum_probs=26.9
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
++|.|.||||++|++|++.|+.....+++.+.
T Consensus 36 k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~ 67 (399)
T 3nzo_A 36 SRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVD 67 (399)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CEEEEEcCChHHHHHHHHHHHHCCCCEEEEEE
Confidence 58999999999999999999976545666664
No 410
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=88.22 E-value=0.45 Score=45.64 Aligned_cols=75 Identities=17% Similarity=0.274 Sum_probs=49.9
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc--c
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG--T 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~--~ 141 (406)
.++.|+|++|.+|+-+..+|.+. ..++....+ +. .++ .+...++|+||.++|.. +
T Consensus 161 k~vvVvGrs~iVG~p~A~lL~~~-gAtVtv~h~-~t--------------~~L-------~~~~~~ADIVI~Avg~p~~I 217 (285)
T 3p2o_A 161 KDAVIIGASNIVGRPMATMLLNA-GATVSVCHI-KT--------------KDL-------SLYTRQADLIIVAAGCVNLL 217 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT-TCEEEEECT-TC--------------SCH-------HHHHTTCSEEEECSSCTTCB
T ss_pred CEEEEECCCchHHHHHHHHHHHC-CCeEEEEeC-Cc--------------hhH-------HHHhhcCCEEEECCCCCCcC
Confidence 58999999999999999999875 345443322 11 011 11235789999999742 2
Q ss_pred hHHHHhhCCCCCEEEEcCCcccCC
Q 015441 142 TQEIIKGLPKSLKIVDLSADFRLR 165 (406)
Q Consensus 142 s~~~~~~l~~G~~VIDlSa~fRl~ 165 (406)
..++ ++.|..|||.+.. |.+
T Consensus 218 ~~~~---vk~GavVIDVgi~-~~~ 237 (285)
T 3p2o_A 218 RSDM---VKEGVIVVDVGIN-RLE 237 (285)
T ss_dssp CGGG---SCTTEEEEECCCE-ECT
T ss_pred CHHH---cCCCeEEEEeccC-ccc
Confidence 2222 4679999999875 443
No 411
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=88.18 E-value=0.32 Score=46.45 Aligned_cols=90 Identities=12% Similarity=0.162 Sum_probs=48.3
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc-CCccccccccCccccCCCcccccCcccC-CCCCEEEEcCCCcc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK-AGQSIGSVFPHLISQDLPTMVAVKDADF-SNVDAVFCCLPHGT 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~-~G~~i~~v~p~l~~~~~~~~~~~~~~~~-~~vDvVF~al~~~~ 141 (406)
.+|.|+|| |-+|+.++..|......++..+ +|+. ..+.+...+... + .+. .... +++ .++|+||.|+|.+.
T Consensus 127 k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~-~R~~~~a~~la~~~~~~-~-~~~-~~~~--~~l~~~aDiIInaTp~gm 199 (281)
T 3o8q_A 127 ATILLIGA-GGAARGVLKPLLDQQPASITVT-NRTFAKAEQLAELVAAY-G-EVK-AQAF--EQLKQSYDVIINSTSASL 199 (281)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTCCSEEEEE-ESSHHHHHHHHHHHGGG-S-CEE-EEEG--GGCCSCEEEEEECSCCCC
T ss_pred CEEEEECc-hHHHHHHHHHHHhcCCCeEEEE-ECCHHHHHHHHHHhhcc-C-Cee-EeeH--HHhcCCCCEEEEcCcCCC
Confidence 57999995 7899999999987654465444 4332 111111111100 0 010 1111 112 57899999999886
Q ss_pred hHHHH--h--hCCCCCEEEEcCC
Q 015441 142 TQEII--K--GLPKSLKIVDLSA 160 (406)
Q Consensus 142 s~~~~--~--~l~~G~~VIDlSa 160 (406)
..+.. + .+..+..|+|+..
T Consensus 200 ~~~~~~l~~~~l~~~~~V~DlvY 222 (281)
T 3o8q_A 200 DGELPAIDPVIFSSRSVCYDMMY 222 (281)
T ss_dssp ----CSCCGGGEEEEEEEEESCC
T ss_pred CCCCCCCCHHHhCcCCEEEEecC
Confidence 53321 1 1345677888864
No 412
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=88.03 E-value=0.44 Score=45.46 Aligned_cols=73 Identities=11% Similarity=0.271 Sum_probs=49.4
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc--c
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG--T 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~--~ 141 (406)
.++.|+|+++.+|+-+.++|.+. ..+++...++ . .++ .+...++|+||.++|.. +
T Consensus 151 k~vvVvG~s~iVG~plA~lL~~~-gAtVtv~~~~-t--------------~~L-------~~~~~~ADIVI~Avg~p~~I 207 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRPLSMMLLNR-NYTVSVCHSK-T--------------KDI-------GSMTRSSKIVVVAVGRPGFL 207 (276)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTT-C--------------SCH-------HHHHHHSSEEEECSSCTTCB
T ss_pred CEEEEEcCChHHHHHHHHHHHHC-CCeEEEEeCC-c--------------ccH-------HHhhccCCEEEECCCCCccc
Confidence 58999999999999999999875 4455444321 0 011 11224689999999852 2
Q ss_pred hHHHHhhCCCCCEEEEcCCcc
Q 015441 142 TQEIIKGLPKSLKIVDLSADF 162 (406)
Q Consensus 142 s~~~~~~l~~G~~VIDlSa~f 162 (406)
..++ ++.|..|||.+.+.
T Consensus 208 ~~~~---vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 208 NREM---VTPGSVVIDVGINY 225 (276)
T ss_dssp CGGG---CCTTCEEEECCCEE
T ss_pred cHhh---ccCCcEEEEeccCc
Confidence 2222 46799999998764
No 413
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=87.96 E-value=0.56 Score=44.49 Aligned_cols=91 Identities=15% Similarity=0.120 Sum_probs=49.3
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s 142 (406)
.++.|+|| |-+|+.++..|......++.. .+|+.. .+.+...+.. .......+.++. . .++|+|+.|+|.+..
T Consensus 121 k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i-~~R~~~~a~~la~~~~~-~~~~~~~~~~l~--~-~~~DivInaTp~gm~ 194 (272)
T 3pwz_A 121 RRVLLLGA-GGAVRGALLPFLQAGPSELVI-ANRDMAKALALRNELDH-SRLRISRYEALE--G-QSFDIVVNATSASLT 194 (272)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTCCSEEEE-ECSCHHHHHHHHHHHCC-TTEEEECSGGGT--T-CCCSEEEECSSGGGG
T ss_pred CEEEEECc-cHHHHHHHHHHHHcCCCEEEE-EeCCHHHHHHHHHHhcc-CCeeEeeHHHhc--c-cCCCEEEECCCCCCC
Confidence 57999995 788999999998764345544 444321 1111111110 000000011111 1 578999999998764
Q ss_pred HHH---Hh-hCCCCCEEEEcCC
Q 015441 143 QEI---IK-GLPKSLKIVDLSA 160 (406)
Q Consensus 143 ~~~---~~-~l~~G~~VIDlSa 160 (406)
.+. .. .+..+..|+|+..
T Consensus 195 ~~~~~i~~~~l~~~~~V~DlvY 216 (272)
T 3pwz_A 195 ADLPPLPADVLGEAALAYELAY 216 (272)
T ss_dssp TCCCCCCGGGGTTCSEEEESSC
T ss_pred CCCCCCCHHHhCcCCEEEEeec
Confidence 321 11 2356778888764
No 414
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=87.90 E-value=0.79 Score=47.28 Aligned_cols=86 Identities=8% Similarity=0.069 Sum_probs=53.5
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCC--cc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPH--GT 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~--~~ 141 (406)
.+|+|+| .|.+|+.+.+.|..+. +++... ++... +...... .+.. ...+ ++.+.++|+|+.+++. -+
T Consensus 278 ktVgIIG-~G~IG~~vA~~l~~~G-~~V~v~-d~~~~-~~~~a~~---~G~~---~~~l-~ell~~aDiVi~~~~t~~lI 346 (494)
T 3d64_A 278 KIAVVAG-YGDVGKGCAQSLRGLG-ATVWVT-EIDPI-CALQAAM---EGYR---VVTM-EYAADKADIFVTATGNYHVI 346 (494)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHTTT-CEEEEE-CSCHH-HHHHHHT---TTCE---ECCH-HHHTTTCSEEEECSSSSCSB
T ss_pred CEEEEEc-cCHHHHHHHHHHHHCC-CEEEEE-eCChH-hHHHHHH---cCCE---eCCH-HHHHhcCCEEEECCCccccc
Confidence 5799999 9999999999998774 666554 32211 1001000 0101 1111 2335689999999742 24
Q ss_pred hHHHHhhCCCCCEEEEcCC
Q 015441 142 TQEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 142 s~~~~~~l~~G~~VIDlSa 160 (406)
..+..+.++.|..+||.+.
T Consensus 347 ~~~~l~~MK~gAilINvgr 365 (494)
T 3d64_A 347 NHDHMKAMRHNAIVCNIGH 365 (494)
T ss_dssp CHHHHHHCCTTEEEEECSS
T ss_pred CHHHHhhCCCCcEEEEcCC
Confidence 4566677788999998765
No 415
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=87.78 E-value=0.46 Score=43.92 Aligned_cols=31 Identities=16% Similarity=0.153 Sum_probs=25.1
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
.+|.|.||+|.+|+++++.|++.. .+++.+.
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~ 52 (253)
T 2nm0_A 22 RSVLVTGGNRGIGLAIARAFADAG-DKVAITY 52 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 479999999999999999998764 4555543
No 416
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=87.68 E-value=0.7 Score=44.35 Aligned_cols=91 Identities=13% Similarity=0.203 Sum_probs=52.0
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCcccc---CCCcccccCcccCCCCCEEEEcCCC
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQ---DLPTMVAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~---~~~~~~~~~~~~~~~vDvVF~al~~ 139 (406)
-.||+|+| .|..|..+.+.|+ . .++++........-++.... +... .+.... +..+..++|+||.|+|.
T Consensus 12 ~~~V~vIG-~G~MG~~iA~~la-a-G~~V~v~d~~~~~~~~~~~~---l~~~~~~~i~~~~--~~~~~~~aDlVieavpe 83 (293)
T 1zej_A 12 HMKVFVIG-AGLMGRGIAIAIA-S-KHEVVLQDVSEKALEAAREQ---IPEELLSKIEFTT--TLEKVKDCDIVMEAVFE 83 (293)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHH-T-TSEEEEECSCHHHHHHHHHH---SCGGGGGGEEEES--SCTTGGGCSEEEECCCS
T ss_pred CCeEEEEe-eCHHHHHHHHHHH-c-CCEEEEEECCHHHHHHHHHH---HHHHHhCCeEEeC--CHHHHcCCCEEEEcCcC
Confidence 36899999 8999999999998 5 56766553211110000000 0000 010011 12235789999999998
Q ss_pred cchH--HHH---hhCCCCCEEEEcCCcc
Q 015441 140 GTTQ--EII---KGLPKSLKIVDLSADF 162 (406)
Q Consensus 140 ~~s~--~~~---~~l~~G~~VIDlSa~f 162 (406)
.... .+. ..+ .|+.++++++..
T Consensus 84 ~~~vk~~l~~~l~~~-~~~IlasntSti 110 (293)
T 1zej_A 84 DLNTKVEVLREVERL-TNAPLCSNTSVI 110 (293)
T ss_dssp CHHHHHHHHHHHHTT-CCSCEEECCSSS
T ss_pred CHHHHHHHHHHHhcC-CCCEEEEECCCc
Confidence 8752 232 234 777777666554
No 417
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=87.66 E-value=0.29 Score=44.48 Aligned_cols=75 Identities=16% Similarity=0.153 Sum_probs=40.0
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCC-ccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAG-QSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G-~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
..+|.|+|+ |.+|+.+++.|.... . ++.+ ++...- +.+..-...+.+ +......+....+.++|.|+.|++...
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g-~-v~vi-d~~~~~~~~~~~~~~~i~g-d~~~~~~l~~a~i~~ad~vi~~~~~d~ 83 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSE-V-FVLA-EDENVRKKVLRSGANFVHG-DPTRVSDLEKANVRGARAVIVDLESDS 83 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSE-E-EEEE-SCGGGHHHHHHTTCEEEES-CTTCHHHHHHTTCTTCSEEEECCSCHH
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCC-e-EEEE-ECCHHHHHHHhcCCeEEEc-CCCCHHHHHhcCcchhcEEEEcCCCcH
Confidence 358999995 999999999998653 3 4444 332210 011000000111 111111121223568999999999764
Q ss_pred h
Q 015441 142 T 142 (406)
Q Consensus 142 s 142 (406)
.
T Consensus 84 ~ 84 (234)
T 2aef_A 84 E 84 (234)
T ss_dssp H
T ss_pred H
Confidence 4
No 418
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=87.65 E-value=0.6 Score=42.12 Aligned_cols=32 Identities=22% Similarity=0.244 Sum_probs=25.6
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
|.+|.|.||+|++|+.+++.|+++. .+++.+.
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g-~~V~~~~ 32 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAG-HTVIGID 32 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCC-CEEEEEe
Confidence 3579999999999999999998753 5666554
No 419
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=87.40 E-value=0.52 Score=42.92 Aligned_cols=33 Identities=18% Similarity=0.175 Sum_probs=26.3
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEE
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLM 94 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l 94 (406)
++.++.|.||+|.+|+++.+.|+++....++..
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~ 35 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINI 35 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEE
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEe
Confidence 345799999999999999999987555555544
No 420
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=87.37 E-value=0.97 Score=44.26 Aligned_cols=100 Identities=8% Similarity=0.112 Sum_probs=61.9
Q ss_pred CCccEEEEECcccHHHHHHHHH--HHcCCCceEEEEeccCcCC--ccccccccCccccCCCcccccCc--ccCCCCCEEE
Q 015441 61 EKQVRIGLLGASGYTGAEIVRL--LANHPYFGIKLMTADRKAG--QSIGSVFPHLISQDLPTMVAVKD--ADFSNVDAVF 134 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrl--L~~hp~~elv~l~s~~~~G--~~i~~v~p~l~~~~~~~~~~~~~--~~~~~vDvVF 134 (406)
++.+||.|.|++|..++.+++. +.+.++.++++..+.+..| +.+..-++++ .++.+..+++ +...++|+++
T Consensus 8 ~~~tkviV~G~~Gk~~~~ml~~~~~~~r~~~~vVagV~P~~~g~~~~v~~G~~~~---Gvpvy~sv~ea~~~~p~~DlaV 84 (334)
T 3mwd_B 8 SRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEI---LIPVFKNMADAMRKHPEVDVLI 84 (334)
T ss_dssp CTTCCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEEEEETTEEE---EEEEESSHHHHHHHCTTCCEEE
T ss_pred CCCCeEEEECCchHHHHHHHHhcccccCCCceEEEEEcCCCCCccceEeccCccC---CceeeCCHHHHhhcCCCCcEEE
Confidence 4457999999999988877776 5567888999998877664 5442111111 1232322211 1112689999
Q ss_pred EcCCCcchH-HHHhhCC-CCCE-EEEcCCccc
Q 015441 135 CCLPHGTTQ-EIIKGLP-KSLK-IVDLSADFR 163 (406)
Q Consensus 135 ~al~~~~s~-~~~~~l~-~G~~-VIDlSa~fR 163 (406)
.++|..... ...+++. +|++ ||=++.-|.
T Consensus 85 i~vp~~~a~~ai~ea~~~~Gv~~vViiT~G~~ 116 (334)
T 3mwd_B 85 NFASLRSAYDSTMETMNYAQIRTIAIIAEGIP 116 (334)
T ss_dssp ECCCTTTHHHHHHHHTTSTTCCEEEECCSCCC
T ss_pred EecCHHHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 999987664 4556775 7763 332566553
No 421
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=87.22 E-value=0.49 Score=43.94 Aligned_cols=31 Identities=16% Similarity=0.081 Sum_probs=25.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
.+|.|.||+|.+|+++++.|++.. .+++.+.
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~ 39 (264)
T 2dtx_A 9 KVVIVTGASMGIGRAIAERFVDEG-SKVIDLS 39 (264)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 469999999999999999998764 4665554
No 422
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=87.08 E-value=0.61 Score=46.66 Aligned_cols=94 Identities=18% Similarity=0.302 Sum_probs=52.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCC-ccccccccCccccCC--------------Cc-c-----ccc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAG-QSIGSVFPHLISQDL--------------PT-M-----VAV 122 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G-~~i~~v~p~l~~~~~--------------~~-~-----~~~ 122 (406)
.+|+|+| .|-+|+..++.+.... .+++.+ +++..- ..+.+....+...+. .. . ..+
T Consensus 173 ~~V~ViG-aG~iG~~aa~~a~~~G-a~V~v~-D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 249 (401)
T 1x13_A 173 AKVMVIG-AGVAGLAAIGAANSLG-AIVRAF-DTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF 249 (401)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEE-CSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCC-CEEEEE-cCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence 5899999 6999999999998776 465444 433210 111110000000000 00 0 001
Q ss_pred CcccCCCCCEEEEc--CC-----CcchHHHHhhCCCCCEEEEcCCc
Q 015441 123 KDADFSNVDAVFCC--LP-----HGTTQEIIKGLPKSLKIVDLSAD 161 (406)
Q Consensus 123 ~~~~~~~vDvVF~a--l~-----~~~s~~~~~~l~~G~~VIDlSa~ 161 (406)
.+.+.++|+||.| .| .-++.+.++.+..|.+|||++.+
T Consensus 250 -~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~ 294 (401)
T 1x13_A 250 -AAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQ 294 (401)
T ss_dssp -HHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGG
T ss_pred -HHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCC
Confidence 1122478999999 32 22456666777789999999864
No 423
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=86.97 E-value=0.55 Score=45.88 Aligned_cols=83 Identities=13% Similarity=0.209 Sum_probs=50.7
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch-
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT- 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s- 142 (406)
.+|+|+| .|.+|+++.+.+..+ .+++.+.. +.. .....+ .+ . ....+ ++.+..+|+|.+++|-...
T Consensus 142 ~tvGIiG-~G~IG~~va~~~~~f-g~~v~~~d-~~~-~~~~~~-----~~--~-~~~~l-~ell~~sDivslh~Plt~~T 208 (334)
T 3kb6_A 142 LTLGVIG-TGRIGSRVAMYGLAF-GMKVLCYD-VVK-REDLKE-----KG--C-VYTSL-DELLKESDVISLHVPYTKET 208 (334)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEC-SSC-CHHHHH-----TT--C-EECCH-HHHHHHCSEEEECCCCCTTT
T ss_pred cEEEEEC-cchHHHHHHHhhccc-CceeeecC-Ccc-chhhhh-----cC--c-eecCH-HHHHhhCCEEEEcCCCChhh
Confidence 4799999 999999999999876 46666553 211 111110 00 0 01112 2335689999999884332
Q ss_pred -----HHHHhhCCCCCEEEEcCC
Q 015441 143 -----QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 143 -----~~~~~~l~~G~~VIDlSa 160 (406)
++....++.|..+| |.|
T Consensus 209 ~~li~~~~l~~mk~~a~lI-N~a 230 (334)
T 3kb6_A 209 HHMINEERISLMKDGVYLI-NTA 230 (334)
T ss_dssp TTCBCHHHHHHSCTTEEEE-ECS
T ss_pred ccCcCHHHHhhcCCCeEEE-ecC
Confidence 44555567788888 444
No 424
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=86.90 E-value=0.54 Score=45.43 Aligned_cols=74 Identities=19% Similarity=0.264 Sum_probs=49.1
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcchH
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQ 143 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s~ 143 (406)
.++.|+|++|.+|+-+.++|.+. ..++... .++.. ++. + .+...++|+||.|+|..
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~-gAtVtv~-~~~T~--------------~l~-l----~~~~~~ADIVI~Avg~p--- 221 (300)
T 4a26_A 166 KRAVVLGRSNIVGAPVAALLMKE-NATVTIV-HSGTS--------------TED-M----IDYLRTADIVIAAMGQP--- 221 (300)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT-TCEEEEE-CTTSC--------------HHH-H----HHHHHTCSEEEECSCCT---
T ss_pred CEEEEECCCchHHHHHHHHHHHC-CCeEEEE-eCCCC--------------Cch-h----hhhhccCCEEEECCCCC---
Confidence 58999999999999999999875 3454433 32110 110 0 02235789999999853
Q ss_pred HHHh--hCCCCCEEEEcCCc
Q 015441 144 EIIK--GLPKSLKIVDLSAD 161 (406)
Q Consensus 144 ~~~~--~l~~G~~VIDlSa~ 161 (406)
++.+ .+..|..|||.+..
T Consensus 222 ~~I~~~~vk~GavVIDvgi~ 241 (300)
T 4a26_A 222 GYVKGEWIKEGAAVVDVGTT 241 (300)
T ss_dssp TCBCGGGSCTTCEEEECCCE
T ss_pred CCCcHHhcCCCcEEEEEecc
Confidence 2222 24679999999875
No 425
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=86.84 E-value=0.79 Score=46.66 Aligned_cols=87 Identities=18% Similarity=0.242 Sum_probs=55.9
Q ss_pred cEEEEECccc---HHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc
Q 015441 64 VRIGLLGASG---YTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG 140 (406)
Q Consensus 64 ikVaIvGATG---~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~ 140 (406)
.+|+|+|||+ ..|..+++.|.++....+..++-+ +..+. + ++.+..++ +....+|+++.|.|..
T Consensus 9 ~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~---~~~i~-------G--~~~y~sl~-~lp~~~Dlavi~vp~~ 75 (457)
T 2csu_A 9 KGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIK---EEEVQ-------G--VKAYKSVK-DIPDEIDLAIIVVPKR 75 (457)
T ss_dssp SEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSS---CSEET-------T--EECBSSTT-SCSSCCSEEEECSCHH
T ss_pred CeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCC---CCeEC-------C--EeccCCHH-HcCCCCCEEEEecCHH
Confidence 5799999994 679999999987765566666543 22221 1 11122221 1113689999999998
Q ss_pred chHHHHhhC-CCCCE-EEEcCCccc
Q 015441 141 TTQEIIKGL-PKSLK-IVDLSADFR 163 (406)
Q Consensus 141 ~s~~~~~~l-~~G~~-VIDlSa~fR 163 (406)
...+.+..+ ++|++ ||=+++-|.
T Consensus 76 ~~~~~v~e~~~~Gi~~vv~~s~G~~ 100 (457)
T 2csu_A 76 FVKDTLIQCGEKGVKGVVIITAGFG 100 (457)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCSST
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCC
Confidence 888877654 66764 344676663
No 426
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=86.82 E-value=0.84 Score=43.77 Aligned_cols=75 Identities=17% Similarity=0.184 Sum_probs=50.0
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc--c
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG--T 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~--~ 141 (406)
.++.|+|++|.+|+-+..+|.+. ..++....++. .++ .+...++|+||.++|.. +
T Consensus 162 k~vvVvGrs~iVG~plA~lL~~~-gAtVtv~hs~T---------------~~L-------~~~~~~ADIVI~Avg~p~~I 218 (286)
T 4a5o_A 162 MDAVVVGASNIVGRPMALELLLG-GCTVTVTHRFT---------------RDL-------ADHVSRADLVVVAAGKPGLV 218 (286)
T ss_dssp CEEEEECTTSTTHHHHHHHHHHT-TCEEEEECTTC---------------SCH-------HHHHHTCSEEEECCCCTTCB
T ss_pred CEEEEECCCchhHHHHHHHHHHC-CCeEEEEeCCC---------------cCH-------HHHhccCCEEEECCCCCCCC
Confidence 58999999999999999999875 34554443211 011 11235789999999742 2
Q ss_pred hHHHHhhCCCCCEEEEcCCcccCC
Q 015441 142 TQEIIKGLPKSLKIVDLSADFRLR 165 (406)
Q Consensus 142 s~~~~~~l~~G~~VIDlSa~fRl~ 165 (406)
..++ ++.|..|||.+.+ |.+
T Consensus 219 ~~~~---vk~GavVIDvgi~-~~~ 238 (286)
T 4a5o_A 219 KGEW---IKEGAIVIDVGIN-RQA 238 (286)
T ss_dssp CGGG---SCTTCEEEECCSC-SSC
T ss_pred CHHH---cCCCeEEEEeccc-ccc
Confidence 2222 4679999999875 443
No 427
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=86.80 E-value=0.47 Score=45.56 Aligned_cols=75 Identities=17% Similarity=0.249 Sum_probs=49.8
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcchH
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQ 143 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s~ 143 (406)
.+|.|+|+++.||+-+.++|.+. ...+....++. .++ .+...++|+||.|.+..
T Consensus 160 k~vvVIG~s~iVG~p~A~lL~~~-gAtVtv~hs~t---------------~~L-------~~~~~~ADIVI~Avg~p--- 213 (288)
T 1b0a_A 160 LNAVVIGASNIVGRPMSMELLLA-GCTTTVTHRFT---------------KNL-------RHHVENADLLIVAVGKP--- 213 (288)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTT-TCEEEEECSSC---------------SCH-------HHHHHHCSEEEECSCCT---
T ss_pred CEEEEECCChHHHHHHHHHHHHC-CCeEEEEeCCc---------------hhH-------HHHhccCCEEEECCCCc---
Confidence 58999999989999999999875 34544442211 111 11224689999999843
Q ss_pred HHHhh--CCCCCEEEEcCCcccCC
Q 015441 144 EIIKG--LPKSLKIVDLSADFRLR 165 (406)
Q Consensus 144 ~~~~~--l~~G~~VIDlSa~fRl~ 165 (406)
++.+. ++.|..|||.+-+ |.+
T Consensus 214 ~lI~~~~vk~GavVIDVgi~-r~~ 236 (288)
T 1b0a_A 214 GFIPGDWIKEGAIVIDVGIN-RLE 236 (288)
T ss_dssp TCBCTTTSCTTCEEEECCCE-ECT
T ss_pred CcCCHHHcCCCcEEEEccCC-ccC
Confidence 22321 4679999999875 443
No 428
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=86.71 E-value=1 Score=43.53 Aligned_cols=72 Identities=15% Similarity=0.195 Sum_probs=49.0
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCc--c
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHG--T 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~--~ 141 (406)
.+|.|+|+++.+|+-+.++|.+.- .++....+ +. .++ .+...++|+||.|.+.. +
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~g-AtVtv~hs-~t--------------~~L-------~~~~~~ADIVI~Avg~p~~I 222 (301)
T 1a4i_A 166 RHAVVVGRSKIVGAPMHDLLLWNN-ATVTTCHS-KT--------------AHL-------DEEVNKGDILVVATGQPEMV 222 (301)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTT-CEEEEECT-TC--------------SSH-------HHHHTTCSEEEECCCCTTCB
T ss_pred CEEEEECCCchHHHHHHHHHHhCC-CeEEEEEC-Cc--------------ccH-------HHHhccCCEEEECCCCcccC
Confidence 589999988899999999998753 45443321 10 111 12235789999999853 2
Q ss_pred hHHHHhhCCCCCEEEEcCCc
Q 015441 142 TQEIIKGLPKSLKIVDLSAD 161 (406)
Q Consensus 142 s~~~~~~l~~G~~VIDlSa~ 161 (406)
..++ ++.|..|||.+-+
T Consensus 223 ~~~~---vk~GavVIDVgi~ 239 (301)
T 1a4i_A 223 KGEW---IKPGAIVIDCGIN 239 (301)
T ss_dssp CGGG---SCTTCEEEECCCB
T ss_pred CHHH---cCCCcEEEEccCC
Confidence 2233 4679999999886
No 429
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=86.40 E-value=0.66 Score=45.04 Aligned_cols=31 Identities=26% Similarity=0.573 Sum_probs=25.9
Q ss_pred cEEEEECcccHHHHHHHHHHH-cCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLA-NHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~-~hp~~elv~l~ 95 (406)
|+|.|.||||++|+.|++.|+ +.. .+++.+.
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g-~~V~~~~ 34 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTN-HSVVIVD 34 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC-CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCC-CEEEEEe
Confidence 389999999999999999998 654 5777664
No 430
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=86.33 E-value=0.74 Score=47.33 Aligned_cols=86 Identities=12% Similarity=0.096 Sum_probs=51.9
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCC--cc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPH--GT 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~--~~ 141 (406)
.+|+|+| .|.+|+.+++.|..+ .+++.... +... +...... .+.. ...+ ++.+.++|+|+.|+.. -+
T Consensus 258 ktVgIIG-~G~IG~~vA~~l~~~-G~~Viv~d-~~~~-~~~~a~~---~g~~---~~~l-~ell~~aDiVi~~~~t~~lI 326 (479)
T 1v8b_A 258 KIVVICG-YGDVGKGCASSMKGL-GARVYITE-IDPI-CAIQAVM---EGFN---VVTL-DEIVDKGDFFITCTGNVDVI 326 (479)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHH-TCEEEEEC-SCHH-HHHHHHT---TTCE---ECCH-HHHTTTCSEEEECCSSSSSB
T ss_pred CEEEEEe-eCHHHHHHHHHHHhC-cCEEEEEe-CChh-hHHHHHH---cCCE---ecCH-HHHHhcCCEEEECCChhhhc
Confidence 5799999 999999999999866 35665543 2211 0000000 0100 1111 2335689999999642 23
Q ss_pred hHHHHhhCCCCCEEEEcCC
Q 015441 142 TQEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 142 s~~~~~~l~~G~~VIDlSa 160 (406)
..+..+.++.|..+||.+.
T Consensus 327 ~~~~l~~MK~gailiNvgr 345 (479)
T 1v8b_A 327 KLEHLLKMKNNAVVGNIGH 345 (479)
T ss_dssp CHHHHTTCCTTCEEEECSS
T ss_pred CHHHHhhcCCCcEEEEeCC
Confidence 4555566678999998764
No 431
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=86.02 E-value=0.91 Score=43.33 Aligned_cols=75 Identities=16% Similarity=0.215 Sum_probs=41.2
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCC-ceEEEEeccCc--C-Cc--cccccccCccccCCCcccccCcccCCCCCEEEEc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPY-FGIKLMTADRK--A-GQ--SIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCC 136 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~-~elv~l~s~~~--~-G~--~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~a 136 (406)
|+||+|+| .|.+|..++..|..... .+++.+ ++.. . +. .+....+ +...... ....+.+.+.++|+||.|
T Consensus 1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~-d~~~~~~~~~~~~l~~~~~-~~~~~~~-~~~~d~~~~~~aDvViia 76 (309)
T 1hyh_A 1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFI-DANEAKVKADQIDFQDAMA-NLEAHGN-IVINDWAALADADVVIST 76 (309)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEE-CSSHHHHHHHHHHHHHHGG-GSSSCCE-EEESCGGGGTTCSEEEEC
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEE-cCCHHHHHHHHHHHHhhhh-hcCCCeE-EEeCCHHHhCCCCEEEEe
Confidence 36899999 89999999998875432 355544 3321 0 10 0110000 0011111 101123446789999999
Q ss_pred CCCcc
Q 015441 137 LPHGT 141 (406)
Q Consensus 137 l~~~~ 141 (406)
++...
T Consensus 77 v~~~~ 81 (309)
T 1hyh_A 77 LGNIK 81 (309)
T ss_dssp CSCGG
T ss_pred cCCcc
Confidence 98644
No 432
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=85.73 E-value=1.3 Score=43.72 Aligned_cols=94 Identities=18% Similarity=0.252 Sum_probs=51.9
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCC-ccccccccCcc---cc-------------CCC-c-----cc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAG-QSIGSVFPHLI---SQ-------------DLP-T-----MV 120 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G-~~i~~v~p~l~---~~-------------~~~-~-----~~ 120 (406)
.+|+|+| .|-+|+..++.+.... .++ .+.+++..- ....+....+. .. .+. . ..
T Consensus 173 ~~V~ViG-aG~iG~~aa~~a~~~G-a~V-~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 249 (384)
T 1l7d_A 173 ARVLVFG-VGVAGLQAIATAKRLG-AVV-MATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 249 (384)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT-CEE-EEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCC-CEE-EEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence 5899999 6999999999998776 464 444443211 11111000000 00 000 0 00
Q ss_pred ccCcccCCCCCEEEEcC---CC----cchHHHHhhCCCCCEEEEcCCc
Q 015441 121 AVKDADFSNVDAVFCCL---PH----GTTQEIIKGLPKSLKIVDLSAD 161 (406)
Q Consensus 121 ~~~~~~~~~vDvVF~al---~~----~~s~~~~~~l~~G~~VIDlSa~ 161 (406)
.+ .+.+.++|+||.|+ +. -++.+..+.+..|.+|||++.+
T Consensus 250 ~l-~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~ 296 (384)
T 1l7d_A 250 AV-LKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVE 296 (384)
T ss_dssp HH-HHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGG
T ss_pred HH-HHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecC
Confidence 01 11235799999999 32 1245556666778999999854
No 433
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=85.50 E-value=0.55 Score=45.31 Aligned_cols=73 Identities=21% Similarity=0.246 Sum_probs=39.6
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCc-eEEEEeccCc---CCc--cccccccCccccCCCcccccCcccCCCCCEEEEcC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYF-GIKLMTADRK---AGQ--SIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCL 137 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~-elv~l~s~~~---~G~--~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al 137 (406)
+||+|+|| |.+|..++..|...... +++.+ ++.. .+. .+....+.+. ... +...+.+++.++|+||.|.
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~-D~~~~~~~~~~~~l~~~~~~~~--~~~-i~~~d~~~~~~aDvViiav 75 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLI-DVDKKRAEGDALDLIHGTPFTR--RAN-IYAGDYADLKGSDVVIVAA 75 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEE-CSSHHHHHHHHHHHHHHGGGSC--CCE-EEECCGGGGTTCSEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEE-eCChHHHHHHHHHHHhhhhhcC--CcE-EEeCCHHHhCCCCEEEEcc
Confidence 48999996 99999999988753322 55544 3321 010 0010000000 000 1111234567899999999
Q ss_pred CCcc
Q 015441 138 PHGT 141 (406)
Q Consensus 138 ~~~~ 141 (406)
+...
T Consensus 76 ~~~~ 79 (319)
T 1a5z_A 76 GVPQ 79 (319)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8643
No 434
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=85.41 E-value=0.81 Score=44.02 Aligned_cols=71 Identities=10% Similarity=0.140 Sum_probs=39.2
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCc-eEEEEeccCc--CCccccccccCccccCCCcccccCcccCCCCCEEEEcCCC
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYF-GIKLMTADRK--AGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~-elv~l~s~~~--~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~ 139 (406)
+.||+|+|| |.+|..+...|+....+ +++.+ +... .|+..+..+ +....+. . ..+.+++.++|+|+.+.+.
T Consensus 14 ~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~-Di~~~~~g~a~dl~~--~~~~~i~-~-t~d~~~l~~aD~Vi~aag~ 87 (303)
T 2i6t_A 14 VNKITVVGG-GELGIACTLAISAKGIADRLVLL-DLSEGTKGATMDLEI--FNLPNVE-I-SKDLSASAHSKVVIFTVNS 87 (303)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEE-CCC-----CHHHHHH--HTCTTEE-E-ESCGGGGTTCSEEEECCCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEE-cCCcchHHHHHHHhh--hcCCCeE-E-eCCHHHHCCCCEEEEcCCC
Confidence 469999995 99999988877743322 56554 3322 232222111 1111111 1 1233457899999999854
No 435
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=85.35 E-value=0.38 Score=45.16 Aligned_cols=88 Identities=11% Similarity=0.114 Sum_probs=49.3
Q ss_pred EEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc-CCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcchH
Q 015441 65 RIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK-AGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQ 143 (406)
Q Consensus 65 kVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~-~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s~ 143 (406)
+|+|+| +|-+|+.++..|.....-++..+ +|+. ..+.+.. .+.... ..++ .+...++|+||.|+|.+...
T Consensus 110 ~vliiG-aGg~a~ai~~~L~~~G~~~I~v~-nR~~~ka~~la~---~~~~~~---~~~~-~~~~~~aDiVInatp~gm~p 180 (253)
T 3u62_A 110 PVVVVG-AGGAARAVIYALLQMGVKDIWVV-NRTIERAKALDF---PVKIFS---LDQL-DEVVKKAKSLFNTTSVGMKG 180 (253)
T ss_dssp SEEEEC-CSHHHHHHHHHHHHTTCCCEEEE-ESCHHHHHTCCS---SCEEEE---GGGH-HHHHHTCSEEEECSSTTTTS
T ss_pred eEEEEC-cHHHHHHHHHHHHHcCCCEEEEE-eCCHHHHHHHHH---HcccCC---HHHH-HhhhcCCCEEEECCCCCCCC
Confidence 799999 58899999998887543355444 3332 1111111 111000 1111 12235789999999876432
Q ss_pred H---HHh-hCCCCCEEEEcCCc
Q 015441 144 E---IIK-GLPKSLKIVDLSAD 161 (406)
Q Consensus 144 ~---~~~-~l~~G~~VIDlSa~ 161 (406)
+ +.. .+..+..|+|+...
T Consensus 181 ~~~~i~~~~l~~~~~V~Divy~ 202 (253)
T 3u62_A 181 EELPVSDDSLKNLSLVYDVIYF 202 (253)
T ss_dssp CCCSCCHHHHTTCSEEEECSSS
T ss_pred CCCCCCHHHhCcCCEEEEeeCC
Confidence 1 111 23567888998764
No 436
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=85.10 E-value=0.43 Score=48.62 Aligned_cols=34 Identities=18% Similarity=0.180 Sum_probs=25.8
Q ss_pred ccCCccEEEEECcccHHHHHHHHHHHcCCCceEEEE
Q 015441 59 KSEKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLM 94 (406)
Q Consensus 59 ~~~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l 94 (406)
....|.+|+|+| .||||.-+.-.|++. ..+++.+
T Consensus 17 ~~~~m~~IaViG-lGYVGLp~A~~~A~~-G~~V~g~ 50 (444)
T 3vtf_A 17 RGSHMASLSVLG-LGYVGVVHAVGFALL-GHRVVGY 50 (444)
T ss_dssp TTCCCCEEEEEC-CSHHHHHHHHHHHHH-TCEEEEE
T ss_pred CCCCCCEEEEEc-cCHHHHHHHHHHHhC-CCcEEEE
Confidence 344567999999 999999999888853 2466665
No 437
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=85.04 E-value=0.75 Score=43.56 Aligned_cols=30 Identities=23% Similarity=0.452 Sum_probs=25.0
Q ss_pred EEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 65 RIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 65 kVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
+|.|.||||++|+.|++.|.+.. .+++.+.
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~ 31 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNG-HDVIILD 31 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 79999999999999999998653 4666654
No 438
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=84.79 E-value=0.81 Score=47.28 Aligned_cols=93 Identities=13% Similarity=0.127 Sum_probs=50.1
Q ss_pred cEEEEECcccHHHHHHHHHHHcC-----CCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANH-----PYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLP 138 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~h-----p~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~ 138 (406)
.||+||| .|.+|..+++.|.+. +.++++....+.+......... .+...+ ....+. .+...++|+||+|+|
T Consensus 55 KkIgIIG-lGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~-G~~v~d-~ta~s~-aEAa~~ADVVILaVP 130 (525)
T 3fr7_A 55 KQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAA-GFTEES-GTLGDI-WETVSGSDLVLLLIS 130 (525)
T ss_dssp SEEEEEC-CTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHT-TCCTTT-TCEEEH-HHHHHHCSEEEECSC
T ss_pred CEEEEEe-EhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHC-CCEEec-CCCCCH-HHHHhcCCEEEECCC
Confidence 4899999 999999999988754 2445543322211111101000 000000 000111 223357899999999
Q ss_pred CcchHH----HHhhCCCCCEEEEcCC
Q 015441 139 HGTTQE----IIKGLPKSLKIVDLSA 160 (406)
Q Consensus 139 ~~~s~~----~~~~l~~G~~VIDlSa 160 (406)
.....+ +.+.+..|..|+..+|
T Consensus 131 ~~~~~eVl~eI~p~LK~GaILs~AaG 156 (525)
T 3fr7_A 131 DAAQADNYEKIFSHMKPNSILGLSHG 156 (525)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEESSS
T ss_pred hHHHHHHHHHHHHhcCCCCeEEEeCC
Confidence 765544 3344667877765555
No 439
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=84.65 E-value=0.86 Score=41.27 Aligned_cols=31 Identities=26% Similarity=0.255 Sum_probs=25.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
.+|.|.||+|.+|+.+++.|.++. .+++.+.
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G-~~V~~~~ 38 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAG-AKVGLHG 38 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-CEEEEEC
Confidence 479999999999999999998764 4665553
No 440
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=84.51 E-value=0.84 Score=46.87 Aligned_cols=96 Identities=15% Similarity=0.235 Sum_probs=51.7
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCC-cc----ccccccCcccc-CCC---------ccc-ccCcccC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAG-QS----IGSVFPHLISQ-DLP---------TMV-AVKDADF 127 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G-~~----i~~v~p~l~~~-~~~---------~~~-~~~~~~~ 127 (406)
.||+||| .|..|..+...|++.- .+++.. +++... .. +......+... .+. .+. ..+.+.+
T Consensus 6 ~kVgVIG-aG~MG~~IA~~la~aG-~~V~l~-D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 82 (483)
T 3mog_A 6 QTVAVIG-SGTMGAGIAEVAASHG-HQVLLY-DISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHAL 82 (483)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHHTT-CCEEEE-CSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGGGG
T ss_pred CEEEEEC-cCHHHHHHHHHHHHCC-CeEEEE-ECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHHHh
Confidence 5899999 7999999999988643 355444 332110 00 00000000000 000 000 1122345
Q ss_pred CCCCEEEEcCCCcch--HHHH----hhCCCCCEEEEcCCcc
Q 015441 128 SNVDAVFCCLPHGTT--QEII----KGLPKSLKIVDLSADF 162 (406)
Q Consensus 128 ~~vDvVF~al~~~~s--~~~~----~~l~~G~~VIDlSa~f 162 (406)
.++|+||.|.+.... +++. +.+..++.++++++..
T Consensus 83 ~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti 123 (483)
T 3mog_A 83 AAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSI 123 (483)
T ss_dssp GGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSS
T ss_pred cCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCC
Confidence 789999999998743 2333 3345678777776655
No 441
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=84.50 E-value=0.43 Score=47.71 Aligned_cols=91 Identities=11% Similarity=0.169 Sum_probs=49.6
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s 142 (406)
.+|+|+|+ |-+|+.+++.|..+..-+++.+ ++... .+.+..- +....+. ..++ .+.+.++|+||.|+|....
T Consensus 168 ~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~-~r~~~ra~~la~~---~g~~~~~-~~~l-~~~l~~aDvVi~at~~~~~ 240 (404)
T 1gpj_A 168 KTVLVVGA-GEMGKTVAKSLVDRGVRAVLVA-NRTYERAVELARD---LGGEAVR-FDEL-VDHLARSDVVVSATAAPHP 240 (404)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCSEEEEE-CSSHHHHHHHHHH---HTCEECC-GGGH-HHHHHTCSEEEECCSSSSC
T ss_pred CEEEEECh-HHHHHHHHHHHHHCCCCEEEEE-eCCHHHHHHHHHH---cCCceec-HHhH-HHHhcCCCEEEEccCCCCc
Confidence 58999995 9999999999986543355544 33211 0011110 1110000 1111 1123579999999986543
Q ss_pred ---HHHHhh--C----CCCCEEEEcCCc
Q 015441 143 ---QEIIKG--L----PKSLKIVDLSAD 161 (406)
Q Consensus 143 ---~~~~~~--l----~~G~~VIDlSa~ 161 (406)
.+..+. + ..+..+||++.+
T Consensus 241 ~~~~~~l~~~~lk~r~~~~~v~vdia~P 268 (404)
T 1gpj_A 241 VIHVDDVREALRKRDRRSPILIIDIANP 268 (404)
T ss_dssp CBCHHHHHHHHHHCSSCCCEEEEECCSS
T ss_pred eecHHHHHHHHHhccCCCCEEEEEccCC
Confidence 233333 2 134678998753
No 442
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=84.38 E-value=0.41 Score=45.08 Aligned_cols=89 Identities=16% Similarity=0.165 Sum_probs=46.7
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc-CCccccccccCccccCCCcccccCcccC--CCCCEEEEcCCCc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK-AGQSIGSVFPHLISQDLPTMVAVKDADF--SNVDAVFCCLPHG 140 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~-~G~~i~~v~p~l~~~~~~~~~~~~~~~~--~~vDvVF~al~~~ 140 (406)
.+|.|+|| |-+|+.+++.|.... .+++.+. ++. ..+.+...++.. + ... ..+ .+++ .++|+|+.|+|.+
T Consensus 120 ~~vlvlGa-Gg~g~a~a~~L~~~G-~~v~v~~-R~~~~a~~l~~~~~~~-~-~~~-~~~--~~~~~~~~~DivIn~t~~~ 191 (272)
T 1p77_A 120 QHVLILGA-GGATKGVLLPLLQAQ-QNIVLAN-RTFSKTKELAERFQPY-G-NIQ-AVS--MDSIPLQTYDLVINATSAG 191 (272)
T ss_dssp CEEEEECC-SHHHHTTHHHHHHTT-CEEEEEE-SSHHHHHHHHHHHGGG-S-CEE-EEE--GGGCCCSCCSEEEECCCC-
T ss_pred CEEEEECC-cHHHHHHHHHHHHCC-CEEEEEE-CCHHHHHHHHHHcccc-C-CeE-Eee--HHHhccCCCCEEEECCCCC
Confidence 57999996 779999999998765 5665543 331 111221111100 0 110 111 1123 3799999999977
Q ss_pred chHHHH---hh-CCCCCEEEEcCC
Q 015441 141 TTQEII---KG-LPKSLKIVDLSA 160 (406)
Q Consensus 141 ~s~~~~---~~-l~~G~~VIDlSa 160 (406)
...... .. +..+..|+|++-
T Consensus 192 ~~~~~~~i~~~~l~~~~~v~D~~y 215 (272)
T 1p77_A 192 LSGGTASVDAEILKLGSAFYDMQY 215 (272)
T ss_dssp ------CCCHHHHHHCSCEEESCC
T ss_pred CCCCCCCCCHHHcCCCCEEEEeeC
Confidence 643211 11 234678888864
No 443
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=84.31 E-value=0.88 Score=46.18 Aligned_cols=85 Identities=9% Similarity=0.080 Sum_probs=51.9
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCC--cc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPH--GT 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~--~~ 141 (406)
.+|+|+| .|.+|+.+++.|...- +++.. .++... +...... .+.. ...+ ++.+.++|+|+.+.+. -+
T Consensus 212 ktVgIiG-~G~IG~~vA~~Lka~G-a~Viv-~D~~p~-~a~~A~~---~G~~---~~sL-~eal~~ADVVilt~gt~~iI 280 (436)
T 3h9u_A 212 KTACVCG-YGDVGKGCAAALRGFG-ARVVV-TEVDPI-NALQAAM---EGYQ---VLLV-EDVVEEAHIFVTTTGNDDII 280 (436)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT-CEEEE-ECSCHH-HHHHHHH---TTCE---ECCH-HHHTTTCSEEEECSSCSCSB
T ss_pred CEEEEEe-eCHHHHHHHHHHHHCC-CEEEE-ECCChh-hhHHHHH---hCCe---ecCH-HHHHhhCCEEEECCCCcCcc
Confidence 5899999 9999999999998764 56544 333210 0000000 0101 1111 2335689999998764 34
Q ss_pred hHHHHhhCCCCCEEEEcC
Q 015441 142 TQEIIKGLPKSLKIVDLS 159 (406)
Q Consensus 142 s~~~~~~l~~G~~VIDlS 159 (406)
..+..+.++.|..||+.+
T Consensus 281 ~~e~l~~MK~gAIVINvg 298 (436)
T 3h9u_A 281 TSEHFPRMRDDAIVCNIG 298 (436)
T ss_dssp CTTTGGGCCTTEEEEECS
T ss_pred CHHHHhhcCCCcEEEEeC
Confidence 456666677899999876
No 444
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=84.19 E-value=0.41 Score=46.49 Aligned_cols=93 Identities=12% Similarity=0.103 Sum_probs=48.8
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC----CccccccccCccccCCCcccccCc-----ccCCCCCEEE
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA----GQSIGSVFPHLISQDLPTMVAVKD-----ADFSNVDAVF 134 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~----G~~i~~v~p~l~~~~~~~~~~~~~-----~~~~~vDvVF 134 (406)
.++.|+|| |-+|+.++..|.....-+++.+ +|+.. .+.+..-.....+..+. ...+++ +.+.++|+|+
T Consensus 155 k~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~-nR~~~~~~~a~~la~~~~~~~~~~~~-~~~~~~~~~l~~~l~~aDiII 231 (315)
T 3tnl_A 155 KKMTICGA-GGAATAICIQAALDGVKEISIF-NRKDDFYANAEKTVEKINSKTDCKAQ-LFDIEDHEQLRKEIAESVIFT 231 (315)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCSEEEEE-ECSSTTHHHHHHHHHHHHHHSSCEEE-EEETTCHHHHHHHHHTCSEEE
T ss_pred CEEEEECC-ChHHHHHHHHHHHCCCCEEEEE-ECCCchHHHHHHHHHHhhhhcCCceE-EeccchHHHHHhhhcCCCEEE
Confidence 57999996 8889999999987644355444 44311 11111000000000000 011111 1134789999
Q ss_pred EcCCCcchHH-----H--HhhCCCCCEEEEcC
Q 015441 135 CCLPHGTTQE-----I--IKGLPKSLKIVDLS 159 (406)
Q Consensus 135 ~al~~~~s~~-----~--~~~l~~G~~VIDlS 159 (406)
.|+|.+.... + ...+..+..|+|+.
T Consensus 232 NaTp~Gm~~~~~~~p~~~~~~l~~~~~V~Dlv 263 (315)
T 3tnl_A 232 NATGVGMKPFEGETLLPSADMLRPELIVSDVV 263 (315)
T ss_dssp ECSSTTSTTSTTCCSCCCGGGCCTTCEEEESC
T ss_pred ECccCCCCCCCCCCCCCcHHHcCCCCEEEEec
Confidence 9999776532 1 11245567788875
No 445
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=84.11 E-value=1.3 Score=40.43 Aligned_cols=31 Identities=13% Similarity=0.111 Sum_probs=25.5
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
.+|.|.||+|.+|+++++.|.++. .+++.+.
T Consensus 13 k~vlVTGasggiG~~~a~~l~~~G-~~V~~~~ 43 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLVGQG-ASAVLLD 43 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-CEEEEEe
Confidence 479999999999999999998764 4665554
No 446
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=83.83 E-value=1.2 Score=47.94 Aligned_cols=98 Identities=15% Similarity=0.279 Sum_probs=53.9
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC----Ccc-cccc----c--cCccc----cCCCccc-ccCccc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA----GQS-IGSV----F--PHLIS----QDLPTMV-AVKDAD 126 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~----G~~-i~~v----~--p~l~~----~~~~~~~-~~~~~~ 126 (406)
+.||+|+| .|.+|..+...|.+.- ++++.+ +++.. ++. +... . ..+.. .....+. ..+.+.
T Consensus 312 ~~kV~VIG-aG~MG~~iA~~la~aG-~~V~l~-D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~ 388 (725)
T 2wtb_A 312 IKKVAIIG-GGLMGSGIATALILSN-YPVILK-EVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYES 388 (725)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHHTTT-CCEEEE-CSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSSGG
T ss_pred CcEEEEEc-CCHhhHHHHHHHHhCC-CEEEEE-ECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCHHH
Confidence 46899999 8999999999998653 455544 32211 100 0000 0 00000 0000011 112234
Q ss_pred CCCCCEEEEcCCCcch--HHHH----hhCCCCCEEEEcCCccc
Q 015441 127 FSNVDAVFCCLPHGTT--QEII----KGLPKSLKIVDLSADFR 163 (406)
Q Consensus 127 ~~~vDvVF~al~~~~s--~~~~----~~l~~G~~VIDlSa~fR 163 (406)
+.++|+||.|.+.... +++. +.+..++.++++++...
T Consensus 389 ~~~aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~ 431 (725)
T 2wtb_A 389 FRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTID 431 (725)
T ss_dssp GTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSC
T ss_pred HCCCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCC
Confidence 6789999999997753 2232 23456788889887653
No 447
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=83.28 E-value=1.5 Score=44.51 Aligned_cols=85 Identities=15% Similarity=0.182 Sum_probs=51.5
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCC--Ccc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLP--HGT 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~--~~~ 141 (406)
.+|+|+| .|.+|+.+++.|..+- +++.. .++... +..... ..+.. ...+ ++.+.++|+|+.|++ +-+
T Consensus 221 ktV~ViG-~G~IGk~vA~~Lra~G-a~Viv-~D~dp~-ra~~A~---~~G~~---v~~L-eeal~~ADIVi~atgt~~lI 289 (435)
T 3gvp_A 221 KQVVVCG-YGEVGKGCCAALKAMG-SIVYV-TEIDPI-CALQAC---MDGFR---LVKL-NEVIRQVDIVITCTGNKNVV 289 (435)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT-CEEEE-ECSCHH-HHHHHH---HTTCE---ECCH-HHHTTTCSEEEECSSCSCSB
T ss_pred CEEEEEe-eCHHHHHHHHHHHHCC-CEEEE-EeCChh-hhHHHH---HcCCE---eccH-HHHHhcCCEEEECCCCcccC
Confidence 5899999 8999999999998663 45433 332210 000000 00100 1111 234568999999866 334
Q ss_pred hHHHHhhCCCCCEEEEcC
Q 015441 142 TQEIIKGLPKSLKIVDLS 159 (406)
Q Consensus 142 s~~~~~~l~~G~~VIDlS 159 (406)
..+....++.|..||+.+
T Consensus 290 ~~e~l~~MK~gailINvg 307 (435)
T 3gvp_A 290 TREHLDRMKNSCIVCNMG 307 (435)
T ss_dssp CHHHHHHSCTTEEEEECS
T ss_pred CHHHHHhcCCCcEEEEec
Confidence 566777778899999764
No 448
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=82.85 E-value=1.9 Score=38.76 Aligned_cols=36 Identities=8% Similarity=0.066 Sum_probs=28.5
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK 99 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~ 99 (406)
++.++.|+||.|. |+++++.|.+ ..++++.+.++..
T Consensus 11 ~~k~v~IiGAGg~-g~~v~~~l~~-~~~~~vgfiDd~~ 46 (220)
T 4ea9_A 11 AIGGVVIIGGGGH-AKVVIESLRA-CGETVAAIVDADP 46 (220)
T ss_dssp CSSCEEEECCSHH-HHHHHHHHHH-TTCCEEEEECSCC
T ss_pred CCCCEEEEcCCHH-HHHHHHHHHh-CCCEEEEEEeCCc
Confidence 3457999996665 9999999987 5688888887654
No 449
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=82.79 E-value=0.93 Score=39.61 Aligned_cols=27 Identities=33% Similarity=0.517 Sum_probs=23.2
Q ss_pred EEEEECcccHHHHHHHHHHHcCCCceEEEE
Q 015441 65 RIGLLGASGYTGAEIVRLLANHPYFGIKLM 94 (406)
Q Consensus 65 kVaIvGATG~vG~eLlrlL~~hp~~elv~l 94 (406)
+|.|.||+|.+|+++++.|.++ +++.+
T Consensus 2 ~vlVtGasg~iG~~la~~l~~~---~V~~~ 28 (207)
T 2yut_A 2 RVLITGATGGLGGAFARALKGH---DLLLS 28 (207)
T ss_dssp EEEEETTTSHHHHHHHHHTTTS---EEEEE
T ss_pred EEEEEcCCcHHHHHHHHHHHhC---CEEEE
Confidence 6899999999999999999876 55544
No 450
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=82.37 E-value=1.2 Score=43.19 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=26.2
Q ss_pred CCccEEEEECcccHHHHHHHHHHHcCCCceEEEEecc
Q 015441 61 EKQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTAD 97 (406)
Q Consensus 61 ~~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~ 97 (406)
.+++||+|+|| |.+|..+...|.....++ +.+.+.
T Consensus 7 ~~~~kI~VIGa-G~vG~~lA~~la~~g~~~-V~L~D~ 41 (331)
T 1pzg_A 7 QRRKKVAMIGS-GMIGGTMGYLCALRELAD-VVLYDV 41 (331)
T ss_dssp SCCCEEEEECC-SHHHHHHHHHHHHHTCCE-EEEECS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCe-EEEEEC
Confidence 34469999997 999999999998654446 444443
No 451
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=81.86 E-value=1.3 Score=39.57 Aligned_cols=33 Identities=27% Similarity=0.342 Sum_probs=26.1
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
|..+|.|.||+|.+|+++++.|+++. .+++.+.
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G-~~V~~~~ 36 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKG-YRVGLMA 36 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEE
Confidence 34579999999999999999998754 4665553
No 452
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=81.85 E-value=1.1 Score=45.12 Aligned_cols=77 Identities=16% Similarity=0.201 Sum_probs=42.4
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccc-cccCccccCCCcccccCcccCCCCCEEEEcCCCcch
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGS-VFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~-v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s 142 (406)
.+|.|+| .|.+|+.+.+.|.... .+++.+-.+...-..+.. ..+.+.+ +......+....+.++|+|+.|++....
T Consensus 5 ~~viIiG-~Gr~G~~va~~L~~~g-~~vvvId~d~~~v~~~~~~g~~vi~G-Dat~~~~L~~agi~~A~~viv~~~~~~~ 81 (413)
T 3l9w_A 5 MRVIIAG-FGRFGQITGRLLLSSG-VKMVVLDHDPDHIETLRKFGMKVFYG-DATRMDLLESAGAAKAEVLINAIDDPQT 81 (413)
T ss_dssp CSEEEEC-CSHHHHHHHHHHHHTT-CCEEEEECCHHHHHHHHHTTCCCEES-CTTCHHHHHHTTTTTCSEEEECCSSHHH
T ss_pred CeEEEEC-CCHHHHHHHHHHHHCC-CCEEEEECCHHHHHHHHhCCCeEEEc-CCCCHHHHHhcCCCccCEEEECCCChHH
Confidence 5799999 7999999999998643 566666432211000100 0111112 1111111112234689999999997655
Q ss_pred H
Q 015441 143 Q 143 (406)
Q Consensus 143 ~ 143 (406)
.
T Consensus 82 n 82 (413)
T 3l9w_A 82 N 82 (413)
T ss_dssp H
T ss_pred H
Confidence 3
No 453
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=81.68 E-value=0.37 Score=46.51 Aligned_cols=73 Identities=22% Similarity=0.311 Sum_probs=39.3
Q ss_pred EEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc---CCccccccccC-ccccCCCcccc-cCcccCCCCCEEEEcCCC
Q 015441 65 RIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK---AGQSIGSVFPH-LISQDLPTMVA-VKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 65 kVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~---~G~~i~~v~p~-l~~~~~~~~~~-~~~~~~~~vDvVF~al~~ 139 (406)
||+|+|| |.+|..++-.|.....-|++.+ +... .|.-.+..+.. +...... +.. .+.+++.++|+|+.+.+.
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~-Di~~~~~~g~~~dl~~~~~~~~~~~~-i~~t~d~~a~~~aD~Vi~~ag~ 77 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGYDDLLLI-ARTPGKPQGEALDLAHAAAELGVDIR-ISGSNSYEDMRGSDIVLVTAGI 77 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCSCEEEE-CSSTTHHHHHHHHHHHHHHHHTCCCC-EEEESCGGGGTTCSEEEECCSC
T ss_pred CEEEECc-CHHHHHHHHHHHhCCCCEEEEE-cCChhhHHHHHHHHHHhhhhcCCCeE-EEECCCHHHhCCCCEEEEeCCC
Confidence 6999997 9999999988875432256555 3221 11111100000 0001111 222 233467899999999764
Q ss_pred c
Q 015441 140 G 140 (406)
Q Consensus 140 ~ 140 (406)
.
T Consensus 78 ~ 78 (308)
T 2d4a_B 78 G 78 (308)
T ss_dssp C
T ss_pred C
Confidence 3
No 454
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=81.66 E-value=0.54 Score=45.52 Aligned_cols=95 Identities=19% Similarity=0.192 Sum_probs=45.0
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcchH
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQ 143 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s~ 143 (406)
-+|.|.||+|-+|...++++......+++...+.+.. ..+.....+....+....+.+....-.++|+||.|.+.....
T Consensus 144 ~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~~~~~-~~~~~ga~~~~~~~~~~~~~~~~~~~~g~Dvv~d~~g~~~~~ 222 (349)
T 4a27_A 144 MSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKH-EAIKDSVTHLFDRNADYVQEVKRISAEGVDIVLDCLCGDNTG 222 (349)
T ss_dssp CEEEESSTTSHHHHHHHHHHTTSTTCEEEEEECGGGH-HHHGGGSSEEEETTSCHHHHHHHHCTTCEEEEEEECC-----
T ss_pred CEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCCHHHH-HHHHcCCcEEEcCCccHHHHHHHhcCCCceEEEECCCchhHH
Confidence 4799999999999999988765545666666532211 001000000000000000010000113789999999876554
Q ss_pred HHHhhCCCCCEEEEcC
Q 015441 144 EIIKGLPKSLKIVDLS 159 (406)
Q Consensus 144 ~~~~~l~~G~~VIDlS 159 (406)
...+.+..+-+++..+
T Consensus 223 ~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 223 KGLSLLKPLGTYILYG 238 (349)
T ss_dssp --CTTEEEEEEEEEEC
T ss_pred HHHHHhhcCCEEEEEC
Confidence 4444454444555343
No 455
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=81.63 E-value=1.1 Score=42.66 Aligned_cols=85 Identities=19% Similarity=0.246 Sum_probs=48.8
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCc-CCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcch
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRK-AGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~-~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s 142 (406)
.++.|+|| |-+|+.++..|.....-+++.++ |+. ..+.+.. .+.. . .+.+++. + ++|+|+.|+|.+..
T Consensus 123 k~vlvlGa-GGaaraia~~L~~~G~~~v~v~n-Rt~~ka~~La~---~~~~--~-~~~~l~~--l-~~DivInaTp~Gm~ 191 (282)
T 3fbt_A 123 NICVVLGS-GGAARAVLQYLKDNFAKDIYVVT-RNPEKTSEIYG---EFKV--I-SYDELSN--L-KGDVIINCTPKGMY 191 (282)
T ss_dssp SEEEEECS-STTHHHHHHHHHHTTCSEEEEEE-SCHHHHHHHCT---TSEE--E-EHHHHTT--C-CCSEEEECSSTTST
T ss_pred CEEEEECC-cHHHHHHHHHHHHcCCCEEEEEe-CCHHHHHHHHH---hcCc--c-cHHHHHh--c-cCCEEEECCccCcc
Confidence 58999995 77799999999876543665444 332 1111111 1110 0 1222222 4 78999999997754
Q ss_pred HH-----HHh-hCCCCCEEEEcC
Q 015441 143 QE-----IIK-GLPKSLKIVDLS 159 (406)
Q Consensus 143 ~~-----~~~-~l~~G~~VIDlS 159 (406)
.. +.. .+..+..|+|+-
T Consensus 192 ~~~~~~pi~~~~l~~~~~v~Dlv 214 (282)
T 3fbt_A 192 PKEGESPVDKEVVAKFSSAVDLI 214 (282)
T ss_dssp TSTTCCSSCHHHHTTCSEEEESC
T ss_pred CCCccCCCCHHHcCCCCEEEEEe
Confidence 32 111 235677888875
No 456
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=81.24 E-value=0.95 Score=48.73 Aligned_cols=98 Identities=16% Similarity=0.251 Sum_probs=53.1
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCC-cc-ccccccCc---ccc-CCC---------ccc-ccCccc
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAG-QS-IGSVFPHL---ISQ-DLP---------TMV-AVKDAD 126 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G-~~-i~~v~p~l---~~~-~~~---------~~~-~~~~~~ 126 (406)
..||+||| .|..|..+...|.+.- ++++.+ +++... .. ...+...+ ... .+. .+. ..+.+.
T Consensus 314 i~kV~VIG-aG~MG~~iA~~la~aG-~~V~l~-D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~ 390 (715)
T 1wdk_A 314 VKQAAVLG-AGIMGGGIAYQSASKG-TPILMK-DINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGD 390 (715)
T ss_dssp CSSEEEEC-CHHHHHHHHHHHHHTT-CCEEEE-CSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSSTT
T ss_pred CCEEEEEC-CChhhHHHHHHHHhCC-CEEEEE-ECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCHHH
Confidence 45799999 8999999999988642 355444 332110 00 00000000 000 000 000 112234
Q ss_pred CCCCCEEEEcCCCcch--HHHHh----hCCCCCEEEEcCCccc
Q 015441 127 FSNVDAVFCCLPHGTT--QEIIK----GLPKSLKIVDLSADFR 163 (406)
Q Consensus 127 ~~~vDvVF~al~~~~s--~~~~~----~l~~G~~VIDlSa~fR 163 (406)
+.++|+||.|.+.... +++.. .+..++.++++++...
T Consensus 391 ~~~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~ 433 (715)
T 1wdk_A 391 FGNVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTIS 433 (715)
T ss_dssp GGGCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSC
T ss_pred HCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCC
Confidence 5689999999997653 22322 2356788889887653
No 457
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=80.55 E-value=0.99 Score=41.22 Aligned_cols=31 Identities=16% Similarity=0.169 Sum_probs=25.3
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
.+|.|.||+|.+|+++++.|.+.. .+++.+.
T Consensus 16 k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~ 46 (247)
T 1uzm_A 16 RSVLVTGGNRGIGLAIAQRLAADG-HKVAVTH 46 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 469999999999999999998764 4665553
No 458
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=80.34 E-value=2.6 Score=38.77 Aligned_cols=84 Identities=11% Similarity=0.125 Sum_probs=48.6
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCc-ccccCcccCCCCCEEEEcCCCcch
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPT-MVAVKDADFSNVDAVFCCLPHGTT 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~-~~~~~~~~~~~vDvVF~al~~~~s 142 (406)
.+|.|+| .|-+|...++.|++.. .+++.++.+. ...+.... ....+.. ....+++++.++|+||.|++....
T Consensus 32 k~VLVVG-gG~va~~ka~~Ll~~G-A~VtVvap~~--~~~l~~l~---~~~~i~~i~~~~~~~dL~~adLVIaAT~d~~~ 104 (223)
T 3dfz_A 32 RSVLVVG-GGTIATRRIKGFLQEG-AAITVVAPTV--SAEINEWE---AKGQLRVKRKKVGEEDLLNVFFIVVATNDQAV 104 (223)
T ss_dssp CCEEEEC-CSHHHHHHHHHHGGGC-CCEEEECSSC--CHHHHHHH---HTTSCEEECSCCCGGGSSSCSEEEECCCCTHH
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCC-CEEEEECCCC--CHHHHHHH---HcCCcEEEECCCCHhHhCCCCEEEECCCCHHH
Confidence 5799999 8999999999998753 4565554321 11111100 0001110 112334567899999999987655
Q ss_pred HHHH-hhCCCCCE
Q 015441 143 QEII-KGLPKSLK 154 (406)
Q Consensus 143 ~~~~-~~l~~G~~ 154 (406)
...+ .....|+.
T Consensus 105 N~~I~~~ak~gi~ 117 (223)
T 3dfz_A 105 NKFVKQHIKNDQL 117 (223)
T ss_dssp HHHHHHHSCTTCE
T ss_pred HHHHHHHHhCCCE
Confidence 4433 33455654
No 459
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=79.67 E-value=0.97 Score=41.31 Aligned_cols=31 Identities=10% Similarity=0.029 Sum_probs=25.2
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEE
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLM 94 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l 94 (406)
..+|.|.||+|.+|+++.+.|+++. .+++.+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~ 32 (247)
T 3dii_A 2 NRGVIVTGGGHGIGKQICLDFLEAG-DKVCFI 32 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEE
Confidence 3579999999999999999998764 465554
No 460
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=79.50 E-value=2.1 Score=38.58 Aligned_cols=32 Identities=16% Similarity=0.053 Sum_probs=25.8
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
+.+|.|.||+|.+|+++++.|.++. .+++.+.
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G-~~V~~~~ 33 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARG-DRVAALD 33 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEe
Confidence 3579999999999999999998764 4665554
No 461
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=79.48 E-value=2 Score=39.57 Aligned_cols=31 Identities=23% Similarity=0.298 Sum_probs=25.1
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
.+|.|.||+|.+|+++++.|++.. .+++.+.
T Consensus 29 k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~ 59 (260)
T 3un1_A 29 KVVVITGASQGIGAGLVRAYRDRN-YRVVATS 59 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 469999999999999999998764 4665554
No 462
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=79.48 E-value=2.9 Score=40.73 Aligned_cols=88 Identities=17% Similarity=0.155 Sum_probs=49.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcc-------cCCCCCEEEEc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDA-------DFSNVDAVFCC 136 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~-------~~~~vDvVF~a 136 (406)
-+|.|.||+|-+|...++++...- .+++...+.+ +.+.+ ..+ +.+. .+ +.+.. ...++|+||.|
T Consensus 185 ~~VlV~Ga~G~vG~~~~qla~~~G-a~Vi~~~~~~----~~~~~-~~l-Ga~~-v~-~~~~~~~~~~~~~~~g~D~vid~ 255 (375)
T 2vn8_A 185 KRVLILGASGGVGTFAIQVMKAWD-AHVTAVCSQD----ASELV-RKL-GADD-VI-DYKSGSVEEQLKSLKPFDFILDN 255 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECGG----GHHHH-HHT-TCSE-EE-ETTSSCHHHHHHTSCCBSEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-CEEEEEeChH----HHHHH-HHc-CCCE-EE-ECCchHHHHHHhhcCCCCEEEEC
Confidence 479999999999999999887654 4766654321 11111 011 1010 00 00000 12478999999
Q ss_pred CCCcch--HHHHhhCCCCCEEEEcCC
Q 015441 137 LPHGTT--QEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 137 l~~~~s--~~~~~~l~~G~~VIDlSa 160 (406)
++.... ....+.+..+-++|..+.
T Consensus 256 ~g~~~~~~~~~~~~l~~~G~iv~~g~ 281 (375)
T 2vn8_A 256 VGGSTETWAPDFLKKWSGATYVTLVT 281 (375)
T ss_dssp SCTTHHHHGGGGBCSSSCCEEEESCC
T ss_pred CCChhhhhHHHHHhhcCCcEEEEeCC
Confidence 987632 233344555666665553
No 463
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=79.29 E-value=1.4 Score=40.03 Aligned_cols=32 Identities=22% Similarity=0.113 Sum_probs=26.0
Q ss_pred ccEEEEECcccHHHHHHHHHHHc-CCCceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLAN-HPYFGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~-hp~~elv~l~ 95 (406)
+.+|.|.||+|.+|+.+++.|++ +. .+++.+.
T Consensus 4 ~k~vlITGasggIG~~~a~~L~~~~g-~~V~~~~ 36 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLCRLFS-GDVVLTA 36 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSS-SEEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHhcC-CeEEEEe
Confidence 35799999999999999999987 54 4665554
No 464
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=79.28 E-value=1.3 Score=43.49 Aligned_cols=99 Identities=15% Similarity=0.234 Sum_probs=56.9
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccC---------------cCCc--------cccccccCccccCCCc-c
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADR---------------KAGQ--------SIGSVFPHLISQDLPT-M 119 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~---------------~~G~--------~i~~v~p~l~~~~~~~-~ 119 (406)
.||.|+| .|-+|.++++.|..--.-++..+-.+. +.|+ .+...+|......+.. +
T Consensus 35 ~~VlIvG-aGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~~~i 113 (340)
T 3rui_A 35 TKVLLLG-AGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSI 113 (340)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCCC
T ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEeccc
Confidence 5899999 677799999999876555666553211 1221 1222233221100000 0
Q ss_pred ------------cccC----cccCCCCCEEEEcCCCcchHHHHhh-C-CCCCEEEEcCCcccCC
Q 015441 120 ------------VAVK----DADFSNVDAVFCCLPHGTTQEIIKG-L-PKSLKIVDLSADFRLR 165 (406)
Q Consensus 120 ------------~~~~----~~~~~~vDvVF~al~~~~s~~~~~~-l-~~G~~VIDlSa~fRl~ 165 (406)
..++ .+.+.+.|+||.|+.+..++.+... . ..++.+|+. .++++
T Consensus 114 ~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~tR~lin~~c~~~~~plI~a--a~G~~ 175 (340)
T 3rui_A 114 PMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINA--ALGFD 175 (340)
T ss_dssp CCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTGGGHHHHHHHHHTTCEEEEE--EECSS
T ss_pred cccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHHHHHHHHHHHHHcCCcEEEe--eecce
Confidence 0000 1123578999999999988776543 2 578888863 36664
No 465
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=79.15 E-value=1.2 Score=40.45 Aligned_cols=31 Identities=16% Similarity=-0.014 Sum_probs=25.3
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
.+|.|.||+|.+|+++++.|+++. .+++.+.
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~ 37 (246)
T 2ag5_A 7 KVIILTAAAQGIGQAAALAFAREG-AKVIATD 37 (246)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEE
Confidence 469999999999999999998764 4665553
No 466
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=79.08 E-value=0.92 Score=41.64 Aligned_cols=30 Identities=23% Similarity=0.205 Sum_probs=24.3
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEE
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLM 94 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l 94 (406)
.++.|.||+|.+|+++++.|++.. .+++.+
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~ 32 (258)
T 3a28_C 3 KVAMVTGGAQGIGRGISEKLAADG-FDIAVA 32 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHT-CEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-CEEEEE
Confidence 469999999999999999998653 455544
No 467
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=79.06 E-value=2 Score=44.20 Aligned_cols=86 Identities=13% Similarity=0.146 Sum_probs=51.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCCcc--
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGT-- 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~-- 141 (406)
.+|+|+| .|.+|+.+++.|..+. .+++.+ ++... +..... .+ +.+. ..+ ++.+.++|+||.|++...
T Consensus 275 ktV~IiG-~G~IG~~~A~~lka~G-a~Viv~-d~~~~--~~~~A~-~~-Ga~~---~~l-~e~l~~aDvVi~atgt~~~i 343 (494)
T 3ce6_A 275 KKVLICG-YGDVGKGCAEAMKGQG-ARVSVT-EIDPI--NALQAM-ME-GFDV---VTV-EEAIGDADIVVTATGNKDII 343 (494)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEE-CSCHH--HHHHHH-HT-TCEE---CCH-HHHGGGCSEEEECSSSSCSB
T ss_pred CEEEEEc-cCHHHHHHHHHHHHCC-CEEEEE-eCCHH--HHHHHH-Hc-CCEE---ecH-HHHHhCCCEEEECCCCHHHH
Confidence 5799999 6999999999998664 465444 32211 100000 00 1110 111 122457999999988543
Q ss_pred hHHHHhhCCCCCEEEEcCC
Q 015441 142 TQEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 142 s~~~~~~l~~G~~VIDlSa 160 (406)
..+..+.+..|..||+.+.
T Consensus 344 ~~~~l~~mk~ggilvnvG~ 362 (494)
T 3ce6_A 344 MLEHIKAMKDHAILGNIGH 362 (494)
T ss_dssp CHHHHHHSCTTCEEEECSS
T ss_pred HHHHHHhcCCCcEEEEeCC
Confidence 3355566778889997664
No 468
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=78.89 E-value=2 Score=38.56 Aligned_cols=33 Identities=24% Similarity=0.257 Sum_probs=26.6
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEecc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTAD 97 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~ 97 (406)
.+|.|.||+|.+|+++++.|.+.. .+++.+.++
T Consensus 2 k~vlITGasggiG~~~a~~l~~~G-~~v~~~~~r 34 (245)
T 2ph3_A 2 RKALITGASRGIGRAIALRLAEDG-FALAIHYGQ 34 (245)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTT-CEEEEEESS
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-CEEEEEcCC
Confidence 479999999999999999999764 566665443
No 469
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=78.30 E-value=2.2 Score=41.81 Aligned_cols=93 Identities=13% Similarity=0.185 Sum_probs=52.3
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccC---------------cCCc--------cccccccCcccc----C
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADR---------------KAGQ--------SIGSVFPHLISQ----D 115 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~---------------~~G~--------~i~~v~p~l~~~----~ 115 (406)
..||.|+| .|-+|.+++..|...-.-++..+-.+. +.|+ .+....|..... .
T Consensus 118 ~~~VlvvG-~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~ 196 (353)
T 3h5n_A 118 NAKVVILG-CGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALN 196 (353)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred CCeEEEEC-CCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeecc
Confidence 35899999 577899999999865445565553221 1221 111222222110 1
Q ss_pred CCcccccCcccCCCCCEEEEcCCCcc-hHHHHhh-C-CCCCEEEEc
Q 015441 116 LPTMVAVKDADFSNVDAVFCCLPHGT-TQEIIKG-L-PKSLKIVDL 158 (406)
Q Consensus 116 ~~~~~~~~~~~~~~vDvVF~al~~~~-s~~~~~~-l-~~G~~VIDl 158 (406)
+.....+ .+ +.+.|+|+.|+.... ++.++.. . +.|+.+|+.
T Consensus 197 i~~~~~~-~~-~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~~ 240 (353)
T 3h5n_A 197 INDYTDL-HK-VPEADIWVVSADHPFNLINWVNKYCVRANQPYINA 240 (353)
T ss_dssp CCSGGGG-GG-SCCCSEEEECCCCSTTHHHHHHHHHHHTTCCEEEE
T ss_pred cCchhhh-hH-hccCCEEEEecCChHHHHHHHHHHHHHhCCCEEEE
Confidence 1000001 12 678999999998877 6665533 3 567887753
No 470
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=77.89 E-value=2.3 Score=43.30 Aligned_cols=84 Identities=14% Similarity=0.116 Sum_probs=50.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcCCC--cc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPH--GT 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al~~--~~ 141 (406)
.+|+|+| .|.||+.+++.|..+- +++... ++... ....... .+.. +..+ ++.+..+|+|+.|++. -+
T Consensus 248 KTVgVIG-~G~IGr~vA~~lrafG-a~Viv~-d~dp~-~a~~A~~---~G~~---vv~L-eElL~~ADIVv~atgt~~lI 316 (464)
T 3n58_A 248 KVAVVCG-YGDVGKGSAQSLAGAG-ARVKVT-EVDPI-CALQAAM---DGFE---VVTL-DDAASTADIVVTTTGNKDVI 316 (464)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEE-CSSHH-HHHHHHH---TTCE---ECCH-HHHGGGCSEEEECCSSSSSB
T ss_pred CEEEEEC-cCHHHHHHHHHHHHCC-CEEEEE-eCCcc-hhhHHHh---cCce---eccH-HHHHhhCCEEEECCCCcccc
Confidence 4799999 9999999999998764 465433 22110 0000000 0101 1111 2334679999999864 33
Q ss_pred hHHHHhhCCCCCEEEEc
Q 015441 142 TQEIIKGLPKSLKIVDL 158 (406)
Q Consensus 142 s~~~~~~l~~G~~VIDl 158 (406)
..+.....+.|+.+|..
T Consensus 317 ~~e~l~~MK~GAILINv 333 (464)
T 3n58_A 317 TIDHMRKMKDMCIVGNI 333 (464)
T ss_dssp CHHHHHHSCTTEEEEEC
T ss_pred CHHHHhcCCCCeEEEEc
Confidence 46666777889999844
No 471
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=77.81 E-value=0.82 Score=42.58 Aligned_cols=30 Identities=20% Similarity=0.187 Sum_probs=22.8
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEE
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLM 94 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l 94 (406)
.||.|+|+ |-+|.++++.|.....-++..+
T Consensus 29 ~~VlvvG~-GglG~~va~~La~~Gvg~i~lv 58 (251)
T 1zud_1 29 SQVLIIGL-GGLGTPAALYLAGAGVGTLVLA 58 (251)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCSEEEEE
T ss_pred CcEEEEcc-CHHHHHHHHHHHHcCCCeEEEE
Confidence 58999996 5579999999986655566554
No 472
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=77.70 E-value=0.67 Score=45.70 Aligned_cols=103 Identities=16% Similarity=0.131 Sum_probs=64.8
Q ss_pred cEEEEECcccHHHHHHHHHH---HcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcC---
Q 015441 64 VRIGLLGASGYTGAEIVRLL---ANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCL--- 137 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL---~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al--- 137 (406)
.++.|.+ .|.+|+...+.. .+++..+++++.+...+|+.+.++.+. ...++.+.++++..-.+.|+++..+
T Consensus 8 ~~~vi~~-~g~~~~~~aKta~gl~r~~~~~iVgvid~~~~G~d~ge~~g~--~~gipi~~~l~~al~~~~d~lvig~a~~ 84 (349)
T 2obn_A 8 QRVAILL-HEGTTGTIGKTGLALLRYSEAPIVAVIDRNCAGQSLREITGI--YRYVPIVKSVEAALEYKPQVLVIGIAPK 84 (349)
T ss_dssp CCEEEEC-TTTSSSSSCHHHHHHHHHCCSCEEEEECGGGTTSCHHHHHCC--CSCCCEESSHHHHGGGCCSEEEECCCCC
T ss_pred CcEEEEe-CCCCCcHHHHHhHHhhhcCCCcEEEEEeCCCCCCcHHHhcCC--cCCCCccCCHHHHHhCCCCEEEEEecCC
Confidence 3577777 777776555544 667779999999988999988876553 2345544443222113789999987
Q ss_pred CCcchHHHH----hhCCCCCEEEEcCCcccCCCccch
Q 015441 138 PHGTTQEII----KGLPKSLKIVDLSADFRLRDVSEY 170 (406)
Q Consensus 138 ~~~~s~~~~----~~l~~G~~VIDlSa~fRl~~~~~~ 170 (406)
+.....+|. +++++|.-||. +-.+++.+++++
T Consensus 85 gG~l~~~~~~~i~~Al~~G~~Vvs-glh~~l~~~pel 120 (349)
T 2obn_A 85 GGGIPDDYWIELKTALQAGMSLVN-GLHTPLANIPDL 120 (349)
T ss_dssp CC-SCGGGHHHHHHHHHTTCEEEE-CSSSCCTTCHHH
T ss_pred CCCCCHHHHHHHHHHHHcCCcEEe-CccchhhCCHHH
Confidence 444333333 44678999984 333466654444
No 473
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=77.48 E-value=1.3 Score=38.81 Aligned_cols=96 Identities=16% Similarity=0.090 Sum_probs=48.6
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccC--ccccCCCcccccCcc-cCCCCCEEEEcCCCc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPH--LISQDLPTMVAVKDA-DFSNVDAVFCCLPHG 140 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~--l~~~~~~~~~~~~~~-~~~~vDvVF~al~~~ 140 (406)
.+|.|.||+|-+|+.+++++.... .+++.+......-+........ +...+....+.+... .-.++|++|.|.+..
T Consensus 40 ~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~ 118 (198)
T 1pqw_A 40 ERVLIHSATGGVGMAAVSIAKMIG-ARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGE 118 (198)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCTH
T ss_pred CEEEEeeCCChHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCchH
Confidence 479999999999999999887543 4665554321100011100000 000000000000000 012589999999754
Q ss_pred chHHHHhhCCCCCEEEEcCC
Q 015441 141 TTQEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 141 ~s~~~~~~l~~G~~VIDlSa 160 (406)
......+.+..+.++|..+.
T Consensus 119 ~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 119 AIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp HHHHHHHTEEEEEEEEECSC
T ss_pred HHHHHHHHhccCCEEEEEcC
Confidence 44444455555556665654
No 474
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=76.57 E-value=1.1 Score=41.06 Aligned_cols=30 Identities=23% Similarity=0.142 Sum_probs=24.4
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEE
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLM 94 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l 94 (406)
.+|.|.||+|.+|+++++.|++.. .+++.+
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~ 34 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQG-ADIVLN 34 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcC-CEEEEE
Confidence 469999999999999999998764 455544
No 475
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=76.44 E-value=2.4 Score=39.11 Aligned_cols=33 Identities=24% Similarity=0.261 Sum_probs=25.7
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEec
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTA 96 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s 96 (406)
+.+|.|.||+|.+|+++++.|++.. .+++.+..
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~~~G-~~V~~~~~ 58 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAARQG-WRVGVNYA 58 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-CEEEEEcC
Confidence 3579999999999999999998764 45544433
No 476
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=76.25 E-value=0.93 Score=42.15 Aligned_cols=31 Identities=23% Similarity=0.290 Sum_probs=24.7
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
.+|.|.||+|.+|+++++.|++.- .+++.+.
T Consensus 17 k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~ 47 (266)
T 3p19_A 17 KLVVITGASSGIGEAIARRFSEEG-HPLLLLA 47 (266)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEE
Confidence 468999999999999999998654 4555543
No 477
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=76.18 E-value=0.89 Score=43.52 Aligned_cols=96 Identities=10% Similarity=0.059 Sum_probs=49.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccc-cccccC--ccccCCCcccccCcccCCCCCEEEEcCCCc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSI-GSVFPH--LISQDLPTMVAVKDADFSNVDAVFCCLPHG 140 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i-~~v~p~--l~~~~~~~~~~~~~~~~~~vDvVF~al~~~ 140 (406)
.+|.|.||+|-+|..+++++...- .+++.+..+...-..+ .+..-. +...+....+.+....-.++|++|.|++..
T Consensus 151 ~~vlI~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~ 229 (336)
T 4b7c_A 151 ETVVISGAAGAVGSVAGQIARLKG-CRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGGE 229 (336)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCCcc
Confidence 479999999999999999887654 3776665321100111 110000 000000000000000113689999999864
Q ss_pred chHHHHhhCCCCCEEEEcCC
Q 015441 141 TTQEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 141 ~s~~~~~~l~~G~~VIDlSa 160 (406)
......+.+..+-++|..+.
T Consensus 230 ~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 230 ILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp HHHHHHTTEEEEEEEEECCC
T ss_pred hHHHHHHHHhhCCEEEEEee
Confidence 33444444555556665543
No 478
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=76.03 E-value=1.6 Score=42.21 Aligned_cols=94 Identities=13% Similarity=0.177 Sum_probs=49.7
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCC-ccccccccCccccCC--------CcccccCcccCCCCCEEE
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAG-QSIGSVFPHLISQDL--------PTMVAVKDADFSNVDAVF 134 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G-~~i~~v~p~l~~~~~--------~~~~~~~~~~~~~vDvVF 134 (406)
-+|.|.||+|-+|...++++... ..+++.+++..... .+.+.. ..+..... ..+..... ...++|+||
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~-~~lGa~~vi~~~~~~~~~~~~~~~-~~~~~Dvvi 245 (357)
T 1zsy_A 169 DSVIQNASNSGVGQAVIQIAAAL-GLRTINVVRDRPDIQKLSDRL-KSLGAEHVITEEELRRPEMKNFFK-DMPQPRLAL 245 (357)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHH-TCEEEEEECCCSCHHHHHHHH-HHTTCSEEEEHHHHHSGGGGGTTS-SSCCCSEEE
T ss_pred CEEEEeCCcCHHHHHHHHHHHHc-CCEEEEEecCccchHHHHHHH-HhcCCcEEEecCcchHHHHHHHHh-CCCCceEEE
Confidence 47999999999999999877644 34555555432110 000100 00110000 00111100 112589999
Q ss_pred EcCCCcchHHHHhhCCCCCEEEEcCC
Q 015441 135 CCLPHGTTQEIIKGLPKSLKIVDLSA 160 (406)
Q Consensus 135 ~al~~~~s~~~~~~l~~G~~VIDlSa 160 (406)
.|++.....+..+.+..+-++|..+.
T Consensus 246 d~~g~~~~~~~~~~l~~~G~iv~~G~ 271 (357)
T 1zsy_A 246 NCVGGKSSTELLRQLARGGTMVTYGG 271 (357)
T ss_dssp ESSCHHHHHHHHTTSCTTCEEEECCC
T ss_pred ECCCcHHHHHHHHhhCCCCEEEEEec
Confidence 99987655555555666666665543
No 479
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=75.88 E-value=1.7 Score=40.87 Aligned_cols=87 Identities=11% Similarity=0.121 Sum_probs=48.1
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCc-c----cCCCCCEEEEcCC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKD-A----DFSNVDAVFCCLP 138 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~-~----~~~~vDvVF~al~ 138 (406)
-+|.|+||+|-+|...++++...- .+++.+......-+.... + +.+. .+ +.+. . .+.++|+||. ++
T Consensus 127 ~~vlV~Ga~G~vG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~----~-ga~~-~~-~~~~~~~~~~~~~~~d~vid-~g 197 (302)
T 1iz0_A 127 EKVLVQAAAGALGTAAVQVARAMG-LRVLAAASRPEKLALPLA----L-GAEE-AA-TYAEVPERAKAWGGLDLVLE-VR 197 (302)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSGGGSHHHHH----T-TCSE-EE-EGGGHHHHHHHTTSEEEEEE-CS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHh----c-CCCE-EE-ECCcchhHHHHhcCceEEEE-CC
Confidence 479999999999999999887654 477666542211111111 1 1110 01 1101 1 1257899999 88
Q ss_pred CcchHHHHhhCCCCCEEEEcC
Q 015441 139 HGTTQEIIKGLPKSLKIVDLS 159 (406)
Q Consensus 139 ~~~s~~~~~~l~~G~~VIDlS 159 (406)
........+.+..+-+++..+
T Consensus 198 ~~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 198 GKEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp CTTHHHHHTTEEEEEEEEEC-
T ss_pred HHHHHHHHHhhccCCEEEEEe
Confidence 744444445555555666454
No 480
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=75.53 E-value=3.3 Score=37.05 Aligned_cols=31 Identities=23% Similarity=0.222 Sum_probs=25.3
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
.+|.|.||+|.+|+++++.|.+.. .+++.+.
T Consensus 8 ~~vlVTGasggiG~~~a~~l~~~G-~~V~~~~ 38 (244)
T 1cyd_A 8 LRALVTGAGKGIGRDTVKALHASG-AKVVAVT 38 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-CEEEEEe
Confidence 479999999999999999998754 4665553
No 481
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=75.43 E-value=2 Score=38.05 Aligned_cols=35 Identities=23% Similarity=0.249 Sum_probs=24.1
Q ss_pred CccEEEEECcccHHHHHHHHHHHcCCCceEEEEeccC
Q 015441 62 KQVRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADR 98 (406)
Q Consensus 62 ~~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~ 98 (406)
||.|+.|+||.|+ |+++++.+.... +++..+.++.
T Consensus 2 ~m~~~~I~Gagg~-gk~v~~~~~~~~-~~v~~f~Dd~ 36 (194)
T 3bfp_A 2 RTEKIYIYGASGH-GLVCEDVAKNMG-YKECIFLDDF 36 (194)
T ss_dssp CCSEEEEEC--CH-HHHHHHHHHHHT-CSEEEEEC--
T ss_pred CCccEEEEeCCHH-HHHHHHHHHhCC-CeEEEEEeCC
Confidence 3458999998887 999999886433 7787887653
No 482
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=75.24 E-value=3.4 Score=39.67 Aligned_cols=86 Identities=10% Similarity=0.195 Sum_probs=48.5
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccCcccC-CCCCEEEEcCCCcch
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADF-SNVDAVFCCLPHGTT 142 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~-~~vDvVF~al~~~~s 142 (406)
-+|.|+|| |-+|...++++...- .+++.+..... +.+.+. .+ +.+. .+ .+++.+ .++|+||.|.+...+
T Consensus 178 ~~VlV~Ga-G~vG~~a~qla~~~G-a~Vi~~~~~~~---~~~~~~-~l-Ga~~-v~--~~~~~~~~~~D~vid~~g~~~~ 247 (348)
T 3two_A 178 TKVGVAGF-GGLGSMAVKYAVAMG-AEVSVFARNEH---KKQDAL-SM-GVKH-FY--TDPKQCKEELDFIISTIPTHYD 247 (348)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHTT-CEEEEECSSST---THHHHH-HT-TCSE-EE--SSGGGCCSCEEEEEECCCSCCC
T ss_pred CEEEEECC-cHHHHHHHHHHHHCC-CeEEEEeCCHH---HHHHHH-hc-CCCe-ec--CCHHHHhcCCCEEEECCCcHHH
Confidence 47999997 999999998887554 47666542221 111110 01 1111 11 112222 279999999998744
Q ss_pred -HHHHhhCCCCCEEEEcC
Q 015441 143 -QEIIKGLPKSLKIVDLS 159 (406)
Q Consensus 143 -~~~~~~l~~G~~VIDlS 159 (406)
....+.+..+-+++..+
T Consensus 248 ~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 248 LKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp HHHHHTTEEEEEEEEECC
T ss_pred HHHHHHHHhcCCEEEEEC
Confidence 44445555555666453
No 483
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=75.21 E-value=0.66 Score=43.17 Aligned_cols=92 Identities=20% Similarity=0.297 Sum_probs=50.7
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccC---------------cCCcc--------ccccccCccccCCCccc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADR---------------KAGQS--------IGSVFPHLISQDLPTMV 120 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~---------------~~G~~--------i~~v~p~l~~~~~~~~~ 120 (406)
.||.|+| .|-+|.++++.|...-.-+++.+..+. +.|+. +....|......+. .
T Consensus 32 ~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~--~ 108 (249)
T 1jw9_B 32 SRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN--A 108 (249)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC--S
T ss_pred CeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe--c
Confidence 5899999 688899999999865444665543221 12211 11111111100000 0
Q ss_pred ccCc----ccCCCCCEEEEcCCCcchHHHHhh-C-CCCCEEEEc
Q 015441 121 AVKD----ADFSNVDAVFCCLPHGTTQEIIKG-L-PKSLKIVDL 158 (406)
Q Consensus 121 ~~~~----~~~~~vDvVF~al~~~~s~~~~~~-l-~~G~~VIDl 158 (406)
.+++ +.+.++|+|+.|++...++..+.. + ..|+.+|+.
T Consensus 109 ~~~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p~i~~ 152 (249)
T 1jw9_B 109 LLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSG 152 (249)
T ss_dssp CCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCEEEE
T ss_pred cCCHhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 0111 123578999999998776665543 2 457778864
No 484
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=75.19 E-value=3.4 Score=38.27 Aligned_cols=32 Identities=16% Similarity=0.080 Sum_probs=25.6
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
..+|.|.||+|.+|+++++.|++.. .+++.+.
T Consensus 14 ~k~vlVTGas~GIG~aia~~l~~~G-~~V~~~~ 45 (269)
T 3vtz_A 14 DKVAIVTGGSSGIGLAVVDALVRYG-AKVVSVS 45 (269)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 3579999999999999999998763 4555543
No 485
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=75.08 E-value=2.2 Score=41.47 Aligned_cols=94 Identities=14% Similarity=0.156 Sum_probs=49.8
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCcccccccc-C-ccccCCCcccccCcccCCCCCEEEEcCCCcc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFP-H-LISQDLPTMVAVKDADFSNVDAVFCCLPHGT 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p-~-l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~ 141 (406)
-+|.|+||+|-+|...++++......+++.+.+....-..+.+..- . +...+ ...+.+....-.++|+||.|++...
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~-~~~~~v~~~~~~g~Dvvid~~g~~~ 251 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSK-PLAAEVAALGLGAPAFVFSTTHTDK 251 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTS-CHHHHHHTTCSCCEEEEEECSCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCC-CHHHHHHHhcCCCceEEEECCCchh
Confidence 4799999999999999887764345677666542210000000000 0 00000 0011111111147899999998653
Q ss_pred h-HHHHhhCCCCCEEEEc
Q 015441 142 T-QEIIKGLPKSLKIVDL 158 (406)
Q Consensus 142 s-~~~~~~l~~G~~VIDl 158 (406)
+ ....+.+..+-+++..
T Consensus 252 ~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 252 HAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp HHHHHHHHSCTTCEEEEC
T ss_pred hHHHHHHHhcCCCEEEEE
Confidence 3 3444566666566645
No 486
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=75.04 E-value=1.2 Score=42.46 Aligned_cols=94 Identities=16% Similarity=0.197 Sum_probs=48.9
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccC-ccccCCCcc--cccCcccCCCCCEEEEcCCC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPH-LISQDLPTM--VAVKDADFSNVDAVFCCLPH 139 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~-l~~~~~~~~--~~~~~~~~~~vDvVF~al~~ 139 (406)
.++.|+|| |-+|+.++..|.....-+++. .+|+.. .+.+...+.. .....+... .++ .+.+.++|+|+.|+|.
T Consensus 128 k~vlVlGa-GG~g~aia~~L~~~G~~~v~i-~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l-~~~l~~~DiVInaTp~ 204 (283)
T 3jyo_A 128 DSVVQVGA-GGVGNAVAYALVTHGVQKLQV-ADLDTSRAQALADVINNAVGREAVVGVDARGI-EDVIAAADGVVNATPM 204 (283)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCSEEEE-ECSSHHHHHHHHHHHHHHHTSCCEEEECSTTH-HHHHHHSSEEEECSST
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCCEEEE-EECCHHHHHHHHHHHHhhcCCceEEEcCHHHH-HHHHhcCCEEEECCCC
Confidence 57999996 888999999998764335544 444321 1111110000 000000000 011 1123468999999997
Q ss_pred cchHH----HHh-hCCCCCEEEEcCC
Q 015441 140 GTTQE----IIK-GLPKSLKIVDLSA 160 (406)
Q Consensus 140 ~~s~~----~~~-~l~~G~~VIDlSa 160 (406)
+.... +.. .+..+..|+|+.-
T Consensus 205 Gm~~~~~~pi~~~~l~~~~~v~DlvY 230 (283)
T 3jyo_A 205 GMPAHPGTAFDVSCLTKDHWVGDVVY 230 (283)
T ss_dssp TSTTSCSCSSCGGGCCTTCEEEECCC
T ss_pred CCCCCCCCCCCHHHhCCCCEEEEecC
Confidence 75432 111 2455677788653
No 487
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=74.97 E-value=1.4 Score=42.42 Aligned_cols=95 Identities=16% Similarity=0.162 Sum_probs=48.6
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccC-ccccCCCcccccCcc-cCCCCCEEEEcCCCcc
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPH-LISQDLPTMVAVKDA-DFSNVDAVFCCLPHGT 141 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~-l~~~~~~~~~~~~~~-~~~~vDvVF~al~~~~ 141 (406)
-+|.|.||+|-+|...++++...- .+++.+......-....+.... .........+.+... .-.++|+||.|++...
T Consensus 161 ~~VlV~Gasg~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~~~ 239 (342)
T 4eye_A 161 ETVLVLGAAGGIGTAAIQIAKGMG-AKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGGPA 239 (342)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC--C
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCchhH
Confidence 479999999999999999887654 4776665422110111110000 000000000000000 0126899999999865
Q ss_pred hHHHHhhCCCCCEEEEcC
Q 015441 142 TQEIIKGLPKSLKIVDLS 159 (406)
Q Consensus 142 s~~~~~~l~~G~~VIDlS 159 (406)
.......+..+-+++..+
T Consensus 240 ~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 240 FDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp HHHHHHTEEEEEEEEEC-
T ss_pred HHHHHHhhcCCCEEEEEE
Confidence 555556665555666554
No 488
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=74.46 E-value=2.3 Score=44.75 Aligned_cols=30 Identities=27% Similarity=0.371 Sum_probs=23.9
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEE
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLM 94 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l 94 (406)
.||.|+| .|-+|.++++.|..--.-++..+
T Consensus 328 ~kVLIVG-aGGLGs~va~~La~aGVG~ItLv 357 (598)
T 3vh1_A 328 TKVLLLG-AGTLGCYVSRALIAWGVRKITFV 357 (598)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHTTTCCEEEEE
T ss_pred CeEEEEC-CCHHHHHHHHHHHHcCCCEEEEE
Confidence 5899999 66679999999987655566655
No 489
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=74.45 E-value=2.6 Score=37.81 Aligned_cols=23 Identities=22% Similarity=0.121 Sum_probs=20.6
Q ss_pred cEEEEECcccHHHHHHHHHHHcC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANH 86 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~h 86 (406)
.+|.|.||+|.+|+++++.|+++
T Consensus 3 k~vlITGasggiG~~la~~l~~~ 25 (244)
T 2bd0_A 3 HILLITGAGKGIGRAIALEFARA 25 (244)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHh
Confidence 46999999999999999999854
No 490
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=74.45 E-value=3.7 Score=37.88 Aligned_cols=31 Identities=26% Similarity=0.238 Sum_probs=25.3
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
.+|.|.||+|.+|+++++.|++.. .+++.+.
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G-~~V~~~~ 63 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQG-LKVVGCA 63 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-CEEEEEE
Confidence 469999999999999999998763 5665554
No 491
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=74.38 E-value=2.4 Score=39.38 Aligned_cols=31 Identities=19% Similarity=0.162 Sum_probs=25.2
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
.+|.|.||+|.+|+++++.|+.+. .+++.+.
T Consensus 13 k~vlITGas~GIG~~~a~~L~~~G-~~V~~~~ 43 (311)
T 3o26_A 13 RCAVVTGGNKGIGFEICKQLSSNG-IMVVLTC 43 (311)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred cEEEEecCCchHHHHHHHHHHHCC-CEEEEEe
Confidence 469999999999999999998764 4665554
No 492
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=74.30 E-value=1.3 Score=42.20 Aligned_cols=87 Identities=16% Similarity=0.085 Sum_probs=50.0
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCccccccccCccccCCCcccccC----cccCCCCCEEEEcCCC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVK----DADFSNVDAVFCCLPH 139 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~----~~~~~~vDvVF~al~~ 139 (406)
-+|.|+||+|-+|...++++...- .+++.+.+... ..+.. .+ +.+. .+...+ .+...++|+||.|++.
T Consensus 154 ~~vlV~Ga~G~vG~~a~q~a~~~G-a~vi~~~~~~~--~~~~~---~l-Ga~~-~i~~~~~~~~~~~~~g~D~v~d~~g~ 225 (321)
T 3tqh_A 154 DVVLIHAGAGGVGHLAIQLAKQKG-TTVITTASKRN--HAFLK---AL-GAEQ-CINYHEEDFLLAISTPVDAVIDLVGG 225 (321)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-CEEEEEECHHH--HHHHH---HH-TCSE-EEETTTSCHHHHCCSCEEEEEESSCH
T ss_pred CEEEEEcCCcHHHHHHHHHHHHcC-CEEEEEeccch--HHHHH---Hc-CCCE-EEeCCCcchhhhhccCCCEEEECCCc
Confidence 479999999999999999887554 47666654321 11100 01 1110 011000 1122578999999997
Q ss_pred cchHHHHhhCCCCCEEEEc
Q 015441 140 GTTQEIIKGLPKSLKIVDL 158 (406)
Q Consensus 140 ~~s~~~~~~l~~G~~VIDl 158 (406)
.......+.+..+-+++..
T Consensus 226 ~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 226 DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp HHHHHHGGGEEEEEEEEEC
T ss_pred HHHHHHHHhccCCCEEEEe
Confidence 6664455555555555644
No 493
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=73.91 E-value=4.6 Score=36.40 Aligned_cols=32 Identities=16% Similarity=0.285 Sum_probs=25.9
Q ss_pred ccEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 63 QVRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 63 ~ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
..+|.|.||+|.+|+++++.|.++. .+++.+.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~ 38 (241)
T 1dhr_A 7 ARRVLVYGGRGALGSRCVQAFRARN-WWVASID 38 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCC-CEEEEEe
Confidence 3579999999999999999999764 4665553
No 494
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=73.85 E-value=3 Score=39.08 Aligned_cols=33 Identities=18% Similarity=0.297 Sum_probs=25.8
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADR 98 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~ 98 (406)
.++.|+||+|-+|+.+++.|.... .++ .+.+++
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G-~~V-~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEG-AEV-VLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT-CEE-EEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCc-CEE-EEEECC
Confidence 579999999999999999998765 454 444443
No 495
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=73.74 E-value=2 Score=40.00 Aligned_cols=31 Identities=10% Similarity=0.075 Sum_probs=24.7
Q ss_pred cEEEEECcccH--HHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGY--TGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~--vG~eLlrlL~~hp~~elv~l~ 95 (406)
.+|.|.||+|. +|+++++.|+.+. .+++.+.
T Consensus 27 k~vlVTGasg~~GIG~~ia~~l~~~G-~~V~~~~ 59 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGIAKAMHREG-AELAFTY 59 (280)
T ss_dssp CEEEECCCCSTTCHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHcC-CEEEEee
Confidence 47999999988 9999999998764 4555543
No 496
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=73.67 E-value=3.1 Score=37.45 Aligned_cols=31 Identities=19% Similarity=0.112 Sum_probs=25.6
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
.+|.|.||+|.+|+++++.|++.. .+++.+.
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~G-~~V~~~~ 42 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATAG-ASVVVSD 42 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTT-CEEEEEE
T ss_pred CEEEEECCccHHHHHHHHHHHHCC-CEEEEEc
Confidence 479999999999999999999764 4665553
No 497
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=73.60 E-value=3.2 Score=39.44 Aligned_cols=93 Identities=14% Similarity=0.124 Sum_probs=47.4
Q ss_pred EEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcCCcccccccc-C-ccccCCCcccccCcccCCCCCEEEEcCCCcch
Q 015441 65 RIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKAGQSIGSVFP-H-LISQDLPTMVAVKDADFSNVDAVFCCLPHGTT 142 (406)
Q Consensus 65 kVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~G~~i~~v~p-~-l~~~~~~~~~~~~~~~~~~vDvVF~al~~~~s 142 (406)
+|.|+||+|-+|...++++...- .+++.+.+....-+.+.+..- . +...+.. ........-.++|+||.|++....
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~-~~~~~~~~~~~~d~vid~~g~~~~ 229 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG-YTVEASTGKAAEHDYLRVLGAKEVLAREDVM-AERIRPLDKQRWAAAVDPVGGRTL 229 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEESCTTCHHHHHHTTCSEEEECC----------CCSCCEEEEEECSTTTTH
T ss_pred eEEEecCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHcCCcEEEecCCcH-HHHHHHhcCCcccEEEECCcHHHH
Confidence 69999999999999999887554 466665543211011111000 0 0000000 000000011368999999997544
Q ss_pred HHHHhhCCCCCEEEEcC
Q 015441 143 QEIIKGLPKSLKIVDLS 159 (406)
Q Consensus 143 ~~~~~~l~~G~~VIDlS 159 (406)
....+.+..+-+++..+
T Consensus 230 ~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 230 ATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp HHHHHTEEEEEEEEECS
T ss_pred HHHHHhhccCCEEEEEe
Confidence 44445555555555444
No 498
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=73.53 E-value=1.8 Score=42.56 Aligned_cols=102 Identities=15% Similarity=0.268 Sum_probs=61.5
Q ss_pred cEEEEECcccHHHHHHHHH---HHcC-CCceEEEEeccCcCCccccccccCccccCCCcccccCcccCCCCCEEEEcC-C
Q 015441 64 VRIGLLGASGYTGAEIVRL---LANH-PYFGIKLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCL-P 138 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrl---L~~h-p~~elv~l~s~~~~G~~i~~v~p~l~~~~~~~~~~~~~~~~~~vDvVF~al-~ 138 (406)
.++.|.| .|..|+...+. |.++ +.++++.+. ...+|+.+.++..... ..++++.++++..-.++|+++.+. +
T Consensus 23 ~~~vi~~-~g~~g~~~aKta~gllr~~~~~~iVgvi-~~~~Gkd~ge~~~g~~-~gipv~~d~~~al~~~~d~lvig~a~ 99 (350)
T 2g0t_A 23 TPAAIVA-WGQLGTAHAKTTYGLLRHSRLFKPVCVV-AEHEGKMASDFVKPVR-YDVPVVSSVEKAKEMGAEVLIIGVSN 99 (350)
T ss_dssp EEEEEEC-TTTTTSGGGHHHHHHHHHCSSEEEEEEE-SSCTTCBGGGTCC-CC-SCCBEESSHHHHHHTTCCEEEECCCS
T ss_pred CCEEEEe-CCCCChHHHHHHHHHHhhCCCCeEEEEe-ecCCCCcHHHhhCCCC-CCceeeCCHHHHHhcCCCEEEEEecC
Confidence 4789988 88888777763 3556 669999998 7788998887652222 344444333221113689999976 3
Q ss_pred Cc--chHHHHh----hCCCCCEEEEcCCcccCCCccc
Q 015441 139 HG--TTQEIIK----GLPKSLKIVDLSADFRLRDVSE 169 (406)
Q Consensus 139 ~~--~s~~~~~----~l~~G~~VIDlSa~fRl~~~~~ 169 (406)
.+ ....+.+ ++++|..||.-- ..++.++++
T Consensus 100 ~gg~l~~~~~~~I~~Al~~G~nVvsgl-h~~l~~~pe 135 (350)
T 2g0t_A 100 PGGYLEEQIATLVKKALSLGMDVISGL-HFKISQQTE 135 (350)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEECC-CC--CCHHH
T ss_pred CCCCCCHHHHHHHHHHHHcCCcEEeCC-hhhhhCCHH
Confidence 33 3334433 457899999433 334555433
No 499
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=73.45 E-value=4 Score=36.93 Aligned_cols=31 Identities=16% Similarity=0.164 Sum_probs=25.7
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEe
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMT 95 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~ 95 (406)
.+|.|.||+|.+|+++++.|++.. .+++.+.
T Consensus 15 k~vlITGasggiG~~~a~~l~~~G-~~V~~~~ 45 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVAAAG-ANVAVIY 45 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTT-EEEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-CeEEEEe
Confidence 479999999999999999998764 5666554
No 500
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=73.23 E-value=2 Score=40.44 Aligned_cols=90 Identities=19% Similarity=0.325 Sum_probs=49.1
Q ss_pred cEEEEECcccHHHHHHHHHHHcCCCceEEEEeccCcC-CccccccccCccc-c---CCCcccccCcccCCCCCEEEEcCC
Q 015441 64 VRIGLLGASGYTGAEIVRLLANHPYFGIKLMTADRKA-GQSIGSVFPHLIS-Q---DLPTMVAVKDADFSNVDAVFCCLP 138 (406)
Q Consensus 64 ikVaIvGATG~vG~eLlrlL~~hp~~elv~l~s~~~~-G~~i~~v~p~l~~-~---~~~~~~~~~~~~~~~vDvVF~al~ 138 (406)
.++.|+|| |-+|+.+++.|.... +++.. +++.. .+.+...+..... . ... +.++ .+.+.++|+++.|+|
T Consensus 129 k~vlV~Ga-GgiG~aia~~L~~~G--~V~v~-~r~~~~~~~l~~~~~~~~~~~~~~~~d-~~~~-~~~~~~~DilVn~ag 202 (287)
T 1nvt_A 129 KNIVIYGA-GGAARAVAFELAKDN--NIIIA-NRTVEKAEALAKEIAEKLNKKFGEEVK-FSGL-DVDLDGVDIIINATP 202 (287)
T ss_dssp CEEEEECC-SHHHHHHHHHHTSSS--EEEEE-CSSHHHHHHHHHHHHHHHTCCHHHHEE-EECT-TCCCTTCCEEEECSC
T ss_pred CEEEEECc-hHHHHHHHHHHHHCC--CEEEE-ECCHHHHHHHHHHHhhhcccccceeEE-EeeH-HHhhCCCCEEEECCC
Confidence 47999997 588999999998765 65544 43321 1111110000000 0 000 1111 234568999999999
Q ss_pred CcchHH-----H-H-hhCCCCCEEEEcC
Q 015441 139 HGTTQE-----I-I-KGLPKSLKIVDLS 159 (406)
Q Consensus 139 ~~~s~~-----~-~-~~l~~G~~VIDlS 159 (406)
.+.... + . ..+..+..|+|++
T Consensus 203 ~~~~~~~~~~~~~~~~~l~~~~~v~Dv~ 230 (287)
T 1nvt_A 203 IGMYPNIDVEPIVKAEKLREDMVVMDLI 230 (287)
T ss_dssp TTCTTCCSSCCSSCSTTCCSSSEEEECC
T ss_pred CCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence 765421 1 1 1235677888886
Done!