Your job contains 1 sequence.
>015442
MATSATGMVYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQAGVIIDRTSAPK
QPAPGGPITPVHDLNVPYEGTEEYETPTAEILFPPTPLQTPIQTPLPGSTPLPGSTPLPG
STPLPGTADNSTYNIPTGSSDYPTPASDSGGNTEAKSGNGRPSSYMPPPPSPWMNPRPPL
SVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRKREDFPAQYHNGGYNIPQQDGAGD
AMSEIFELEVSEFPGRQDSVTTANREIFANLASSSVKIPQLDGPIPDPYDDVLSTPNIYN
YQGVVNEDYNIVNTPAPNDIQASTPAVVTQNDAAEDDDDEPLNENDDDELDDVDQGEELN
TQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015442
(406 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2024977 - symbol:AT1G07480 "AT1G07480" species... 678 2.4e-91 2
TAIR|locus:2025027 - symbol:AT1G07470 "AT1G07470" species... 674 6.2e-91 2
TAIR|locus:2168464 - symbol:AT5G59230 species:3702 "Arabi... 160 1.9e-27 3
UNIPROTKB|G4MXK1 - symbol:MGG_01235 "Uncharacterized prot... 138 1.8e-16 3
POMBASE|SPBC28F2.09 - symbol:toa1 "transcription factor T... 131 4.1e-15 3
RGD|69246 - symbol:Gtf2a1 "general transcription factor I... 133 2.2e-14 3
MGI|MGI:1933277 - symbol:Gtf2a1 "general transcription fa... 133 2.2e-14 3
ZFIN|ZDB-GENE-030131-2694 - symbol:gtf2a1 "general transc... 133 3.1e-14 3
UNIPROTKB|P52655 - symbol:GTF2A1 "Transcription initiatio... 133 6.8e-14 3
UNIPROTKB|F1PJI5 - symbol:GTF2A1 "Uncharacterized protein... 133 8.7e-14 3
UNIPROTKB|J9NWE1 - symbol:GTF2A1 "Uncharacterized protein... 133 1.1e-13 3
UNIPROTKB|F1MII0 - symbol:GTF2A1 "Uncharacterized protein... 133 1.1e-13 3
UNIPROTKB|F1NTD4 - symbol:GTF2A1 "Uncharacterized protein... 132 3.1e-13 3
SGD|S000005720 - symbol:TOA1 "TFIIA large subunit" specie... 134 1.3e-12 2
CGD|CAL0003530 - symbol:orf19.2682 species:5476 "Candida ... 116 6.2e-12 2
FB|FBgn0011289 - symbol:TfIIA-L "Transcription factor IIA... 126 6.8e-12 2
DICTYBASE|DDB_G0290327 - symbol:gtf2a1 "transcription ini... 147 9.1e-12 3
ZFIN|ZDB-GENE-060929-28 - symbol:zgc:154100 "zgc:154100" ... 127 5.0e-11 3
MGI|MGI:1919078 - symbol:Gtf2a1l "general transcription f... 121 1.9e-10 2
WB|WBGene00004136 - symbol:pqn-51 species:6239 "Caenorhab... 133 2.1e-10 2
RGD|1308625 - symbol:Gtf2a1l "general transcription facto... 119 3.2e-10 2
UNIPROTKB|F1PKI8 - symbol:STON1 "Uncharacterized protein"... 113 5.5e-10 3
UNIPROTKB|F1MSE9 - symbol:GTF2A1L "Uncharacterized protei... 106 4.5e-09 2
UNIPROTKB|Q9UNN4 - symbol:GTF2A1L "TFIIA-alpha and beta-l... 113 5.5e-09 2
ASPGD|ASPL0000056854 - symbol:AN0816 species:162425 "Emer... 122 1.2e-08 2
UNIPROTKB|E1BRM0 - symbol:STON1 "Uncharacterized protein"... 121 3.1e-08 3
UNIPROTKB|Q53S48 - symbol:ALF "Putative uncharacterized p... 113 5.2e-08 2
UNIPROTKB|I3LE29 - symbol:GTF2A1 "Uncharacterized protein... 133 1.1e-06 2
UNIPROTKB|F1SE01 - symbol:GTF2A1 "Uncharacterized protein... 133 1.3e-06 2
UNIPROTKB|F1NKT1 - symbol:GTF2A1 "Uncharacterized protein... 132 1.4e-06 2
>TAIR|locus:2024977 [details] [associations]
symbol:AT1G07480 "AT1G07480" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005672 "transcription factor TFIIA complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=ISS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR004855 InterPro:IPR009083
InterPro:IPR009088 InterPro:IPR013028 Pfam:PF03153 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0006367 eggNOG:COG5149
GO:GO:0005672 Gene3D:2.30.18.10 SUPFAM:SSF50784 SUPFAM:SSF47396
KO:K03122 Gene3D:1.10.287.100 PANTHER:PTHR12694 HSSP:P32773
EMBL:AY463627 EMBL:AK316911 EMBL:AB493439 EMBL:AJ223635
IPI:IPI00542934 PIR:T51333 RefSeq:NP_172228.3 RefSeq:NP_850937.1
UniGene:At.20059 UniGene:At.48163 UniGene:At.72731
ProteinModelPortal:O49349 SMR:O49349 STRING:O49349 PRIDE:O49349
EnsemblPlants:AT1G07480.1 EnsemblPlants:AT1G07480.2 GeneID:837262
KEGG:ath:AT1G07480 TAIR:At1g07480 HOGENOM:HOG000241323
InParanoid:O49349 OMA:DSSGHYQ PhylomeDB:O49349
ProtClustDB:CLSN2687717 Genevestigator:O49349 Uniprot:O49349
Length = 375
Score = 678 (243.7 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
Identities = 149/280 (53%), Positives = 179/280 (63%)
Query: 128 ADNST-YNIPTGSSDYPTPASDSGGNTEAKSGNGRXXXXXXXXXXXXXXXXXXXXVDVNV 186
ADNS+ YNIPTGSSDYPTP +++G N + K+ +DVNV
Sbjct: 112 ADNSSMYNIPTGSSDYPTPGTENGVNIDVKA--------RPSPYMPPPSPWTNPRLDVNV 163
Query: 187 AYVEGRDEADRGTSHQPLTQDFFTMSAGKRKREDFPAQYHNGGYNIPQQDGAGDAMSEIF 246
AYV+GRDE +RG S+Q TQD F S+GKRKR+D Y NGG +IPQQDGAGDA+ E
Sbjct: 164 AYVDGRDEPERGNSNQQFTQDLFVPSSGKRKRDDSSGHYQNGG-SIPQQDGAGDAIPEA- 221
Query: 247 ELEVSEFPGRQDSVTTANREIFANLASSSVKIPQLDGPIPDPYDDVLSTPNIYNYQGVVN 306
E F R S+ +R++ + SSS KIPQ+DGP+PDPYD++LSTPNIY+YQG +
Sbjct: 222 NFECDAF--RITSI--GDRKVPRDFFSSSSKIPQVDGPMPDPYDEMLSTPNIYSYQGP-S 276
Query: 307 EDYNIVNTPAPNDIQASTPAVVTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTQHLVL 366
E++N TPAPN+IQ STP V Q NTQHLVL
Sbjct: 277 EEFNEARTPAPNEIQTSTPVAV-QNDIIEDDEELLNEDDDDDELDDLESGEDMNTQHLVL 335
Query: 367 AQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
AQFDKVTRTKSRWKC+LKDGIMHIN+KDILFNKA GEFDF
Sbjct: 336 AQFDKVTRTKSRWKCSLKDGIMHINDKDILFNKAAGEFDF 375
Score = 252 (93.8 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
Identities = 53/78 (67%), Positives = 64/78 (82%)
Query: 3 TSATGMVYIRVIEDVISKVRDEFVNNG-PGESVLNELQGIWEMKMIQAGVI---IDRTSA 58
T+ T VYI VIEDV++KVR+EF+NNG PGESVL+ELQGIWE KM+QAGV+ I+R+SA
Sbjct: 4 TTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQGIWETKMMQAGVLNGPIERSSA 63
Query: 59 PKQPAPGGPITPVHDLNV 76
K P PGGP+T HDLNV
Sbjct: 64 QK-PTPGGPLT--HDLNV 78
>TAIR|locus:2025027 [details] [associations]
symbol:AT1G07470 "AT1G07470" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005672 "transcription factor TFIIA complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=ISS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR004855 InterPro:IPR009083
InterPro:IPR009088 InterPro:IPR013028 Pfam:PF03153 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0003743 GO:GO:0006367 GO:GO:0005672
Gene3D:2.30.18.10 SUPFAM:SSF50784 SUPFAM:SSF47396 KO:K03122
Gene3D:1.10.287.100 PANTHER:PTHR12694 HSSP:P32773 UniGene:At.20059
UniGene:At.48163 HOGENOM:HOG000241323 ProtClustDB:CLSN2687717
EMBL:AY039987 EMBL:AY049254 EMBL:AF424559 EMBL:AY085902
EMBL:AY133802 EMBL:AY463597 IPI:IPI00539823 RefSeq:NP_563790.1
UniGene:At.67184 UniGene:At.75320 ProteinModelPortal:Q93VP4
SMR:Q93VP4 STRING:Q93VP4 PRIDE:Q93VP4 EnsemblPlants:AT1G07470.1
GeneID:837259 KEGG:ath:AT1G07470 TAIR:At1g07470 InParanoid:Q93VP4
OMA:SYQGPNE PhylomeDB:Q93VP4 ArrayExpress:Q93VP4
Genevestigator:Q93VP4 Uniprot:Q93VP4
Length = 375
Score = 674 (242.3 bits), Expect = 6.2e-91, Sum P(2) = 6.2e-91
Identities = 149/281 (53%), Positives = 176/281 (62%)
Query: 128 ADNST-YNIPTGSSDYPTPASDSGGNTEAKSGNGRXXXXXXXXXXXXXXXXXXXXVDVNV 186
ADNS+ YNIPTGSSDYPTP +++G N + K+ +DVNV
Sbjct: 112 ADNSSMYNIPTGSSDYPTPGTENGVNIDVKA--------RPSPYMPPPSPWTNPRLDVNV 163
Query: 187 AYVEGRDEADRGTSHQPLTQDFFTMSAGKRKREDFPAQYHNGGYNIPQQDGAGDAMSEI- 245
AYV+GRDE +RG S+Q TQD F S+GKRKR+D A Y NGG +IPQQDGA DA+ E
Sbjct: 164 AYVDGRDEPERGNSNQQFTQDLFVPSSGKRKRDDSSAHYQNGG-SIPQQDGASDAIPEAN 222
Query: 246 FELEVSEFPGRQDSVTTANREIFANLASSSVKIPQLDGPIPDPYDDVLSTPNIYNYQGVV 305
FE +R+I +L SS KIPQ+DGP+PDPYD++LSTPNIY+YQG
Sbjct: 223 FECAALRI------TYVGDRKIPRDLIGSSSKIPQVDGPMPDPYDEMLSTPNIYSYQGP- 275
Query: 306 NEDYNIVNTPAPNDIQASTPAVVTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTQHLV 365
NE++N TPAPN+IQ STP V NTQHLV
Sbjct: 276 NEEFNEARTPAPNEIQTSTPVAVPNDIIEDDEELLNEDDDDDELDDLESGEDM-NTQHLV 334
Query: 366 LAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
LAQFDKVTRTKSRWKC+LKDGIMHIN+KDILFNKATGEFDF
Sbjct: 335 LAQFDKVTRTKSRWKCSLKDGIMHINDKDILFNKATGEFDF 375
Score = 252 (93.8 bits), Expect = 6.2e-91, Sum P(2) = 6.2e-91
Identities = 53/78 (67%), Positives = 64/78 (82%)
Query: 3 TSATGMVYIRVIEDVISKVRDEFVNNG-PGESVLNELQGIWEMKMIQAGVI---IDRTSA 58
T+ T VYI VIEDV++KVR+EF+NNG PGESVL+ELQGIWE KM+QAGV+ I+R+SA
Sbjct: 4 TTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQGIWETKMMQAGVLNGPIERSSA 63
Query: 59 PKQPAPGGPITPVHDLNV 76
K P PGGP+T HDLNV
Sbjct: 64 QK-PTPGGPLT--HDLNV 78
>TAIR|locus:2168464 [details] [associations]
symbol:AT5G59230 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005672 "transcription
factor TFIIA complex" evidence=IEA] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR004855 InterPro:IPR009083 InterPro:IPR009088
InterPro:IPR013028 Pfam:PF03153 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006367 EMBL:AB016890
eggNOG:COG5149 GO:GO:0005672 Gene3D:2.30.18.10 SUPFAM:SSF50784
SUPFAM:SSF47396 HSSP:P52655 KO:K03122 Gene3D:1.10.287.100
PANTHER:PTHR12694 EMBL:AY463598 IPI:IPI00548652 RefSeq:NP_200731.1
UniGene:At.29239 ProteinModelPortal:Q9FIF4 SMR:Q9FIF4 STRING:Q9FIF4
EnsemblPlants:AT5G59230.1 GeneID:836041 KEGG:ath:AT5G59230
TAIR:At5g59230 HOGENOM:HOG000152487 InParanoid:Q9FIF4 OMA:ECKFNAG
PhylomeDB:Q9FIF4 ProtClustDB:CLSN2914858 Genevestigator:Q9FIF4
Uniprot:Q9FIF4
Length = 186
Score = 160 (61.4 bits), Expect = 1.9e-27, Sum P(3) = 1.9e-27
Identities = 26/47 (55%), Positives = 38/47 (80%)
Query: 360 NTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
N QHLV+ QFDKV R+K++W+C G+M IN K++LF++ATG+F+F
Sbjct: 140 NIQHLVMCQFDKVKRSKNKWECKFNAGVMQINGKNVLFSQATGDFNF 186
Score = 122 (48.0 bits), Expect = 1.9e-27, Sum P(3) = 1.9e-27
Identities = 28/69 (40%), Positives = 40/69 (57%)
Query: 1 MATSATGMVYIRVIEDVISKVRDEFVNNGP-GESVLNELQGIWEMKMIQAGVIIDRTSAP 59
++TS T Y VI+DVI+K R + V NG ESVL+++Q +W+ KMIQAG +
Sbjct: 3 LSTSDTSSSYNYVIDDVINKSRCDLVYNGELDESVLSQIQSMWKTKMIQAGAMSGTIETS 62
Query: 60 KQPAPGGPI 68
P P+
Sbjct: 63 SASIPTTPV 71
Score = 62 (26.9 bits), Expect = 1.9e-27, Sum P(3) = 1.9e-27
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 222 PAQYHNGGYNIPQQDGAGDAMSEIFELEVSEFPGRQD 258
P + +G Y IPQQDGA D I +++ +E P +D
Sbjct: 92 PKKESDGFYYIPQQDGARD--EAIVDVDENEEPLNED 126
>UNIPROTKB|G4MXK1 [details] [associations]
symbol:MGG_01235 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR004855 InterPro:IPR009083
InterPro:IPR009088 InterPro:IPR013028 Pfam:PF03153 GO:GO:0043581
GO:GO:0006367 EMBL:CM001232 GO:GO:0005672 Gene3D:2.30.18.10
SUPFAM:SSF50784 SUPFAM:SSF47396 KO:K03122 Gene3D:1.10.287.100
PANTHER:PTHR12694 RefSeq:XP_003714139.1 ProteinModelPortal:G4MXK1
SMR:G4MXK1 EnsemblFungi:MGG_01235T0 GeneID:2679414
KEGG:mgr:MGG_01235 Uniprot:G4MXK1
Length = 407
Score = 138 (53.6 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 22/45 (48%), Positives = 35/45 (77%)
Query: 362 QHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
Q +L +DKV R K++WKC LKDG++ +N K+ +F+KATGE+++
Sbjct: 363 QQQMLCLYDKVQRVKNKWKCTLKDGVLCVNGKEYVFHKATGEYEW 407
Score = 123 (48.4 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 1 MATSATGMVYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQAGVIIDRTSAPK 60
M+ + G VY ++I+ V+ R +F +NG GES +NELQ +W+ K+ G S P
Sbjct: 1 MSNAVVGTVYEQIIKGVMEASRTDFEDNGFGESEINELQQVWQQKLTTMGA----ASFPW 56
Query: 61 QPAPGGPITP 70
P P P P
Sbjct: 57 DPKPDAPTPP 66
Score = 46 (21.3 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 272 ASSSVKIPQLDGPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPND 319
++S +PQ+DGP D D+ L +N D + N P +D
Sbjct: 317 STSGGSVPQVDGPDDDDGDEDLDD--------AINSDLDDDNEPDESD 356
>POMBASE|SPBC28F2.09 [details] [associations]
symbol:toa1 "transcription factor TFIIA complex large
subunit Toa1 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005672 "transcription factor TFIIA complex" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISO]
InterPro:IPR004855 InterPro:IPR009083 InterPro:IPR009088
InterPro:IPR013028 Pfam:PF03153 PomBase:SPBC28F2.09 GO:GO:0005829
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006367 GO:GO:0000991
eggNOG:COG5149 GO:GO:0005672 Gene3D:2.30.18.10 SUPFAM:SSF50784
SUPFAM:SSF47396 KO:K03122 Gene3D:1.10.287.100 PANTHER:PTHR12694
OMA:QEMKQVW PIR:T40052 RefSeq:NP_595670.1 HSSP:P32773
ProteinModelPortal:Q9USU9 STRING:Q9USU9 EnsemblFungi:SPBC28F2.09.1
GeneID:2540632 KEGG:spo:SPBC28F2.09 OrthoDB:EOG4QG0PR
NextBio:20801757 Uniprot:Q9USU9
Length = 369
Score = 131 (51.2 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 362 QHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
Q +VL +DKV K++WKC +DG++ +N KD LF KA GEF++
Sbjct: 324 QAIVLCLYDKVNHHKNKWKCVFRDGVVGVNGKDYLFFKANGEFEW 368
Score = 109 (43.4 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 28/75 (37%), Positives = 39/75 (52%)
Query: 1 MATSATGMVYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQAGVIIDRTSAPK 60
M+ S G VY VI DVI+ R +F NG ++ L ELQ +W+ K++ V + P
Sbjct: 1 MSNSIVGEVYHHVILDVIANSRSDFEENGVDDATLRELQNLWQSKLVATDV----ATFPW 56
Query: 61 QPAPGG--PITPVHD 73
AP G PI + D
Sbjct: 57 AQAPVGTFPIGQLFD 71
Score = 53 (23.7 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 227 NGGYNIPQQDGAGDAMSEIFELEVSEFPGRQDSVTT-ANREIFANLASSSVKIPQLDGPI 285
N ++PQ DGA + + S F + ++ A+ EI+ L + +I Q+DG I
Sbjct: 227 NSRNDVPQTDGAIHDLDDAGS--PSNFESNRFAIAQKADAEIYEVLKKN--RILQIDGTI 282
Query: 286 PDPYDD 291
D D+
Sbjct: 283 EDNEDE 288
Score = 43 (20.2 bits), Expect = 4.3e-14, Sum P(3) = 4.3e-14
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 272 ASSSVKIPQLDGPIPDPYDDVLSTPN 297
A+S +PQ DG I D DD S N
Sbjct: 226 ANSRNDVPQTDGAIHD-LDDAGSPSN 250
>RGD|69246 [details] [associations]
symbol:Gtf2a1 "general transcription factor IIA, 1" species:10116
"Rattus norvegicus" [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005672 "transcription factor TFIIA complex" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017025 "TBP-class protein binding" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
InterPro:IPR004855 InterPro:IPR009083 InterPro:IPR009088
InterPro:IPR013028 Pfam:PF03153 RGD:69246 GO:GO:0006355
GO:GO:0003677 GO:GO:0006367 GeneTree:ENSGT00530000063152
eggNOG:COG5149 GO:GO:0005672 Gene3D:2.30.18.10 SUPFAM:SSF50784
SUPFAM:SSF47396 KO:K03122 Gene3D:1.10.287.100 PANTHER:PTHR12694
CTD:2957 HOGENOM:HOG000015236 HOVERGEN:HBG052771 OMA:HMSATGM
OrthoDB:EOG4TXBST EMBL:AF000943 IPI:IPI00197475 RefSeq:NP_071544.1
UniGene:Rn.44436 ProteinModelPortal:O08949 SMR:O08949 STRING:O08949
PhosphoSite:O08949 PRIDE:O08949 Ensembl:ENSRNOT00000005873
GeneID:83830 KEGG:rno:83830 UCSC:RGD:69246 InParanoid:O08949
NextBio:616464 ArrayExpress:O08949 Genevestigator:O08949
GermOnline:ENSRNOG00000004300 Uniprot:O08949
Length = 377
Score = 133 (51.9 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 21/47 (44%), Positives = 39/47 (82%)
Query: 360 NTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
+T+++V+ Q+DK+ R+K++WK LKDGIM++N +D +F+KA G+ ++
Sbjct: 331 DTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIFSKAIGDAEW 377
Score = 108 (43.1 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 3 TSATGMVYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQAGVI 52
T+ +Y VIEDVI+ VRD F+++G E VL EL+ +WE K++Q+ +
Sbjct: 7 TNTVPKLYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAV 56
Score = 45 (20.9 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 212 SAGKRKREDFPAQYHNGGYNIPQQDGAGDAMSEIFELEVSEF 253
+AG+++ + PAQ + Q DG GD SE E E ++
Sbjct: 253 AAGQQQPQAQPAQQQ--APLVLQVDGTGDTSSEEDEDEEEDY 292
>MGI|MGI:1933277 [details] [associations]
symbol:Gtf2a1 "general transcription factor II A, 1"
species:10090 "Mus musculus" [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IPI] [GO:0003677
"DNA binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005672
"transcription factor TFIIA complex" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017025 "TBP-class protein binding" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
InterPro:IPR004855 InterPro:IPR009083 InterPro:IPR009088
InterPro:IPR013028 Pfam:PF03153 MGI:MGI:1933277 GO:GO:0005737
GO:GO:0006355 GO:GO:0006367 GeneTree:ENSGT00530000063152
eggNOG:COG5149 GO:GO:0005672 Gene3D:2.30.18.10 SUPFAM:SSF50784
SUPFAM:SSF47396 KO:K03122 Gene3D:1.10.287.100 PANTHER:PTHR12694
CTD:2957 HOGENOM:HOG000015236 HOVERGEN:HBG052771 OMA:HMSATGM
OrthoDB:EOG4TXBST EMBL:AF250834 EMBL:AK048711 IPI:IPI00121198
RefSeq:NP_113568.2 RefSeq:NP_780544.1 UniGene:Mm.275728
UniGene:Mm.432242 ProteinModelPortal:Q99PM3 SMR:Q99PM3
MINT:MINT-1348159 STRING:Q99PM3 PhosphoSite:Q99PM3 PaxDb:Q99PM3
PRIDE:Q99PM3 Ensembl:ENSMUST00000021345 GeneID:83602 KEGG:mmu:83602
UCSC:uc007okr.2 InParanoid:Q99PM3 NextBio:350672 Bgee:Q99PM3
CleanEx:MM_GTF2A1 Genevestigator:Q99PM3
GermOnline:ENSMUSG00000020962 Uniprot:Q99PM3
Length = 378
Score = 133 (51.9 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 21/47 (44%), Positives = 39/47 (82%)
Query: 360 NTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
+T+++V+ Q+DK+ R+K++WK LKDGIM++N +D +F+KA G+ ++
Sbjct: 332 DTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIFSKAIGDAEW 378
Score = 108 (43.1 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 3 TSATGMVYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQAGVI 52
T+ +Y VIEDVI+ VRD F+++G E VL EL+ +WE K++Q+ +
Sbjct: 7 TNTVPKLYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAV 56
Score = 45 (20.9 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 212 SAGKRKREDFPAQYHNGGYNIPQQDGAGDAMSEIFELEVSEF 253
+AG+++ + PAQ + Q DG GD SE E E ++
Sbjct: 254 AAGQQQPQAQPAQQQ--APLVLQVDGTGDTSSEEDEDEEEDY 293
>ZFIN|ZDB-GENE-030131-2694 [details] [associations]
symbol:gtf2a1 "general transcription factor IIA,
1" species:7955 "Danio rerio" [GO:0005672 "transcription factor
TFIIA complex" evidence=IEA] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR004855
InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR013028
Pfam:PF03153 ZFIN:ZDB-GENE-030131-2694 GO:GO:0006367 GO:GO:0005672
Gene3D:2.30.18.10 SUPFAM:SSF50784 SUPFAM:SSF47396 HSSP:P52655
KO:K03122 Gene3D:1.10.287.100 PANTHER:PTHR12694 CTD:2957
HOVERGEN:HBG052771 EMBL:BC048894 IPI:IPI00490547 RefSeq:NP_997822.1
UniGene:Dr.78440 ProteinModelPortal:Q7ZUK2 SMR:Q7ZUK2 STRING:Q7ZUK2
GeneID:323974 KEGG:dre:323974 InParanoid:Q7ZUK2 NextBio:20808514
ArrayExpress:Q7ZUK2 Uniprot:Q7ZUK2
Length = 369
Score = 133 (51.9 bits), Expect = 3.1e-14, Sum P(3) = 3.1e-14
Identities = 21/47 (44%), Positives = 39/47 (82%)
Query: 360 NTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
+T+++V+ Q+DK+ R+K++WK LKDGIM++N +D +F+KA G+ ++
Sbjct: 323 DTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDFVFSKAIGDAEW 369
Score = 102 (41.0 bits), Expect = 3.1e-14, Sum P(3) = 3.1e-14
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 1 MATSATG----MVYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQAGVI 52
MA+SA +Y V+EDVI++VR+ F++ G E VL EL+ +WE K++Q+ +
Sbjct: 1 MASSANSNQVPKLYRSVMEDVIAEVRELFLDEGVDEQVLMELKTLWESKLMQSKAV 56
Score = 49 (22.3 bits), Expect = 3.1e-14, Sum P(3) = 3.1e-14
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 234 QQDGAGDAMSEIFELEVSEFPGRQD 258
Q DGAGD SE E E E+ +D
Sbjct: 265 QVDGAGDTSSEEDEEEEDEYDEDED 289
>UNIPROTKB|P52655 [details] [associations]
symbol:GTF2A1 "Transcription initiation factor IIA subunit
1" species:9606 "Homo sapiens" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IDA;TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0005672 "transcription factor TFIIA complex" evidence=IDA]
[GO:0017025 "TBP-class protein binding" evidence=IPI] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] Reactome:REACT_71
InterPro:IPR004855 InterPro:IPR009083 InterPro:IPR009088
InterPro:IPR013028 Pfam:PF03153 Reactome:REACT_116125 GO:GO:0016032
GO:GO:0006355 GO:GO:0003677 GO:GO:0003713 GO:GO:0006368
GO:GO:0006367 Reactome:REACT_1788 eggNOG:COG5149 GO:GO:0005672
Gene3D:2.30.18.10 SUPFAM:SSF50784 SUPFAM:SSF47396 PDB:1NVP
PDBsum:1NVP KO:K03122 Gene3D:1.10.287.100 PANTHER:PTHR12694
EMBL:X75383 EMBL:X77225 EMBL:D14887 EMBL:D14886 EMBL:AC010582
EMBL:BC107155 EMBL:BC107156 IPI:IPI00004350 IPI:IPI00401787
PIR:A49077 RefSeq:NP_056943.1 RefSeq:NP_963889.1 UniGene:Hs.592334
ProteinModelPortal:P52655 SMR:P52655 IntAct:P52655 STRING:P52655
PhosphoSite:P52655 DMDM:1711663 PRIDE:P52655 DNASU:2957
Ensembl:ENST00000434192 Ensembl:ENST00000553612 GeneID:2957
KEGG:hsa:2957 UCSC:uc001xvf.1 CTD:2957 GeneCards:GC14M081646
HGNC:HGNC:4646 HPA:HPA000869 MIM:600520 neXtProt:NX_P52655
PharmGKB:PA29033 HOGENOM:HOG000015236 HOVERGEN:HBG052771
InParanoid:P52655 OMA:HMSATGM OrthoDB:EOG4TXBST PhylomeDB:P52655
ChEMBL:CHEMBL4832 ChiTaRS:GTF2A1 EvolutionaryTrace:P52655
GenomeRNAi:2957 NextBio:11720 PMAP-CutDB:P52655 ArrayExpress:P52655
Bgee:P52655 Genevestigator:P52655 GermOnline:ENSG00000165417
Uniprot:P52655
Length = 376
Score = 133 (51.9 bits), Expect = 6.8e-14, Sum P(3) = 6.8e-14
Identities = 21/47 (44%), Positives = 39/47 (82%)
Query: 360 NTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
+T+++V+ Q+DK+ R+K++WK LKDGIM++N +D +F+KA G+ ++
Sbjct: 330 DTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIFSKAIGDAEW 376
Score = 108 (43.1 bits), Expect = 6.8e-14, Sum P(3) = 6.8e-14
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 3 TSATGMVYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQAGVI 52
T+ +Y VIEDVI+ VRD F+++G E VL EL+ +WE K++Q+ +
Sbjct: 7 TNTVPKLYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAV 56
Score = 40 (19.1 bits), Expect = 6.8e-14, Sum P(3) = 6.8e-14
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 212 SAGKRKREDFPAQYHNGGYNIPQQDGAGDAMSEIFELEVSEF 253
+ G+++ + PAQ + Q DG GD SE E E ++
Sbjct: 252 ATGQQQPQAQPAQTQ--APLVLQVDGTGDTSSEEDEDEEEDY 291
>UNIPROTKB|F1PJI5 [details] [associations]
symbol:GTF2A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005672 "transcription
factor TFIIA complex" evidence=IEA] InterPro:IPR004855
InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR013028
Pfam:PF03153 GO:GO:0003677 GO:GO:0006367
GeneTree:ENSGT00530000063152 GO:GO:0005672 Gene3D:2.30.18.10
SUPFAM:SSF50784 SUPFAM:SSF47396 Gene3D:1.10.287.100
PANTHER:PTHR12694 EMBL:AAEX03005890 Ensembl:ENSCAFT00000027417
Uniprot:F1PJI5
Length = 376
Score = 133 (51.9 bits), Expect = 8.7e-14, Sum P(3) = 8.7e-14
Identities = 21/47 (44%), Positives = 39/47 (82%)
Query: 360 NTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
+T+++V+ Q+DK+ R+K++WK LKDGIM++N +D +F+KA G+ ++
Sbjct: 330 DTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIFSKAIGDAEW 376
Score = 105 (42.0 bits), Expect = 8.7e-14, Sum P(3) = 8.7e-14
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 9 VYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQAGVI 52
+Y VIEDVI+ VRD F+++G E VL EL+ +WE K++Q+ +
Sbjct: 13 LYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAV 56
Score = 42 (19.8 bits), Expect = 8.7e-14, Sum P(3) = 8.7e-14
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 212 SAGKRKREDFPAQYHNGGYNIPQQDGAGDAMSEIFELEVSEFPGRQD 258
+ G+++ + PAQ + Q DG GD SE E E ++ ++
Sbjct: 252 ATGQQQPQTQPAQPQ--APLVLQVDGTGDTSSEEDEDEEEDYDDEEE 296
>UNIPROTKB|J9NWE1 [details] [associations]
symbol:GTF2A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005672 "transcription
factor TFIIA complex" evidence=IEA] InterPro:IPR004855
InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR013028
Pfam:PF03153 GO:GO:0006367 GeneTree:ENSGT00530000063152
GO:GO:0005672 Gene3D:2.30.18.10 SUPFAM:SSF50784 SUPFAM:SSF47396
Gene3D:1.10.287.100 PANTHER:PTHR12694 OMA:HMSATGM EMBL:AAEX03005890
Ensembl:ENSCAFT00000047079 Uniprot:J9NWE1
Length = 392
Score = 133 (51.9 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 21/47 (44%), Positives = 39/47 (82%)
Query: 360 NTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
+T+++V+ Q+DK+ R+K++WK LKDGIM++N +D +F+KA G+ ++
Sbjct: 346 DTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIFSKAIGDAEW 392
Score = 105 (42.0 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 9 VYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQAGVI 52
+Y VIEDVI+ VRD F+++G E VL EL+ +WE K++Q+ +
Sbjct: 29 LYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAV 72
Score = 42 (19.8 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 212 SAGKRKREDFPAQYHNGGYNIPQQDGAGDAMSEIFELEVSEFPGRQD 258
+ G+++ + PAQ + Q DG GD SE E E ++ ++
Sbjct: 268 ATGQQQPQTQPAQPQ--APLVLQVDGTGDTSSEEDEDEEEDYDDEEE 312
>UNIPROTKB|F1MII0 [details] [associations]
symbol:GTF2A1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006367 "transcription initiation from RNA polymerase
II promoter" evidence=IEA] [GO:0005672 "transcription factor TFIIA
complex" evidence=IEA] InterPro:IPR004855 InterPro:IPR009083
InterPro:IPR009088 InterPro:IPR013028 Pfam:PF03153 GO:GO:0003677
GO:GO:0006367 GeneTree:ENSGT00530000063152 GO:GO:0005672
Gene3D:2.30.18.10 SUPFAM:SSF50784 SUPFAM:SSF47396
Gene3D:1.10.287.100 PANTHER:PTHR12694 OMA:HMSATGM EMBL:DAAA02029838
EMBL:DAAA02029839 EMBL:DAAA02029840 IPI:IPI00704075
Ensembl:ENSBTAT00000018145 Uniprot:F1MII0
Length = 378
Score = 133 (51.9 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 21/47 (44%), Positives = 39/47 (82%)
Query: 360 NTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
+T+++V+ Q+DK+ R+K++WK LKDGIM++N +D +F+KA G+ ++
Sbjct: 332 DTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIFSKAIGDAEW 378
Score = 105 (42.0 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 9 VYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQAGVI 52
+Y VIEDVI+ VRD F+++G E VL EL+ +WE K++Q+ +
Sbjct: 15 LYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAV 58
Score = 41 (19.5 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 212 SAGKRKREDFPAQYHNGGYNIPQQDGAGDAMSEIFELEVSEF 253
+ G+++ + PAQ + Q DG GD SE E E ++
Sbjct: 254 ATGQQQPQAQPAQQQ--APLVLQVDGTGDTSSEEDEDEEEDY 293
>UNIPROTKB|F1NTD4 [details] [associations]
symbol:GTF2A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005672 "transcription factor TFIIA complex"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR004855
InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR013028
Pfam:PF03153 GO:GO:0003677 GO:GO:0006367
GeneTree:ENSGT00530000063152 GO:GO:0005672 Gene3D:2.30.18.10
SUPFAM:SSF50784 SUPFAM:SSF47396 Gene3D:1.10.287.100
PANTHER:PTHR12694 OMA:HMSATGM EMBL:AADN02003552 IPI:IPI00577234
Ensembl:ENSGALT00000037655 ArrayExpress:F1NTD4 Uniprot:F1NTD4
Length = 379
Score = 132 (51.5 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 21/47 (44%), Positives = 39/47 (82%)
Query: 360 NTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
+T+++V+ Q+DK+ R+K++WK LKDGIM++N +D +F+KA G+ ++
Sbjct: 333 DTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYVFSKAIGDAEW 379
Score = 101 (40.6 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 20/44 (45%), Positives = 31/44 (70%)
Query: 9 VYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQAGVI 52
+Y VIEDVI+ VR+ F++ G E VL EL+ +WE K++Q+ +
Sbjct: 15 LYRSVIEDVINDVREVFLDEGVDEQVLMELKTLWENKLMQSKAV 58
Score = 42 (19.8 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 234 QQDGAGDAMSEIFELEVSEF 253
Q DGAGD SE E E ++
Sbjct: 275 QVDGAGDTSSEEEEDEEEDY 294
>SGD|S000005720 [details] [associations]
symbol:TOA1 "TFIIA large subunit" species:4932 "Saccharomyces
cerevisiae" [GO:0001129 "TBP-class protein binding RNA polymerase
II transcription factor activity involved in preinitiation complex
assembly" evidence=IGI;IDA] [GO:0051123 "RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IGI;IDA]
[GO:0017025 "TBP-class protein binding" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005672 "transcription factor
TFIIA complex" evidence=IEA;IDA] InterPro:IPR004855
InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR013028
Pfam:PF03153 SGD:S000005720 GO:GO:0005737 EMBL:BK006948
GO:GO:0051123 GeneTree:ENSGT00530000063152 eggNOG:COG5149
GO:GO:0005672 Gene3D:2.30.18.10 SUPFAM:SSF50784 SUPFAM:SSF47396
PDB:1NH2 PDB:1RM1 PDB:1YTF PDBsum:1NH2 PDBsum:1RM1 PDBsum:1YTF
KO:K03122 Gene3D:1.10.287.100 PANTHER:PTHR12694 OrthoDB:EOG4QG0PR
EMBL:M85248 EMBL:Z75102 EMBL:AY693223 PIR:B41810 RefSeq:NP_014837.1
DisProt:DP00104 ProteinModelPortal:P32773 SMR:P32773 DIP:DIP-2347N
IntAct:P32773 MINT:MINT-503105 STRING:P32773 PaxDb:P32773
PeptideAtlas:P32773 EnsemblFungi:YOR194C GeneID:854369
KEGG:sce:YOR194C CYGD:YOR194c HOGENOM:HOG000246665 OMA:DSRQDFE
EvolutionaryTrace:P32773 NextBio:976493 Genevestigator:P32773
GermOnline:YOR194C Uniprot:P32773
Length = 286
Score = 134 (52.2 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 362 QHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
++L+L +DKVTRTK+RWKC+LKDG++ IN D F KA E ++
Sbjct: 241 ENLMLCLYDKVTRTKARWKCSLKDGVVTINRNDYTFQKAQVEAEW 285
Score = 95 (38.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 1 MATSATGMVYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQAGV 51
M+ + VY ++E V+++VR++F N G E L +L+ IW+ K+ + V
Sbjct: 1 MSNAEASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETKV 51
>CGD|CAL0003530 [details] [associations]
symbol:orf19.2682 species:5476 "Candida albicans" [GO:0005672
"transcription factor TFIIA complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0051123 "RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0001129
"TBP-class protein binding RNA polymerase II transcription factor
activity involved in preinitiation complex assembly" evidence=IEA]
InterPro:IPR004855 InterPro:IPR009083 InterPro:IPR009088
InterPro:IPR013028 Pfam:PF03153 CGD:CAL0003530 GO:GO:0006367
EMBL:AACQ01000023 EMBL:AACQ01000025 eggNOG:COG5149 GO:GO:0005672
Gene3D:2.30.18.10 SUPFAM:SSF50784 SUPFAM:SSF47396 KO:K03122
Gene3D:1.10.287.100 PANTHER:PTHR12694 RefSeq:XP_720205.1
RefSeq:XP_720435.1 ProteinModelPortal:Q5AFC5 SMR:Q5AFC5
STRING:Q5AFC5 GeneID:3637926 GeneID:3638110 KEGG:cal:CaO19.10197
KEGG:cal:CaO19.2682 Uniprot:Q5AFC5
Length = 275
Score = 116 (45.9 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 1 MATSATGMVYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQAGV 51
M+ + T +Y VIEDVI+ R +F NNG ES L EL+ IW K+ Q+GV
Sbjct: 1 MSNTETSKLYESVIEDVINDSRQDFENNGIDESTLQELRRIWCEKLTQSGV 51
Score = 109 (43.4 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 363 HLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
+ L FDKV R K++WK L GI +IN KD +F+KA GE ++
Sbjct: 232 NFALCLFDKVQRIKNKWKSTLVAGIANINGKDYVFHKANGESEW 275
>FB|FBgn0011289 [details] [associations]
symbol:TfIIA-L "Transcription factor IIA L" species:7227
"Drosophila melanogaster" [GO:0001094 "TFIID-class transcription
factor binding" evidence=IPI] [GO:0005672 "transcription factor
TFIIA complex" evidence=ISS;IDA] [GO:0017025 "TBP-class protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001128 "RNA polymerase
II transcription coactivator activity involved in preinitiation
complex assembly" evidence=IPI] [GO:0001129 "TBP-class protein
binding RNA polymerase II transcription factor activity involved in
preinitiation complex assembly" evidence=IPI] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=ISS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=NAS] InterPro:IPR004855
InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR013028
Pfam:PF03153 EMBL:AE014297 GO:GO:0045944 GO:GO:0001129
GeneTree:ENSGT00530000063152 eggNOG:COG5149 GO:GO:0005672
Gene3D:2.30.18.10 SUPFAM:SSF50784 SUPFAM:SSF47396 KO:K03122
Gene3D:1.10.287.100 PANTHER:PTHR12694 EMBL:S66759 EMBL:AY061325
PIR:A49076 RefSeq:NP_476995.1 RefSeq:NP_476996.1 RefSeq:NP_733208.1
UniGene:Dm.3640 ProteinModelPortal:P52654 SMR:P52654 IntAct:P52654
MINT:MINT-313938 STRING:P52654 PaxDb:P52654
EnsemblMetazoa:FBtr0085155 GeneID:43284 KEGG:dme:Dmel_CG5930
CTD:43284 FlyBase:FBgn0011289 InParanoid:P52654 OMA:QEMKQVW
OrthoDB:EOG4VHHPH PhylomeDB:P52654 GenomeRNAi:43284 NextBio:833140
Bgee:P52654 GermOnline:CG5930 Uniprot:P52654
Length = 366
Score = 126 (49.4 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 19/47 (40%), Positives = 37/47 (78%)
Query: 360 NTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
+T ++++ Q+DK+TR++++WK LKDGIM++ KD +F K+ G+ ++
Sbjct: 320 DTDNVIVCQYDKITRSRNKWKFYLKDGIMNMRGKDYVFQKSNGDAEW 366
Score = 102 (41.0 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 1 MATSATGM--VYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQAGVI 52
MA T + VY VIEDVI+ VRD F++ G E VL E++ +W K++ + +
Sbjct: 1 MALCQTSVLKVYHAVIEDVITNVRDAFLDEGVDEQVLQEMKQVWRNKLLASKAV 54
>DICTYBASE|DDB_G0290327 [details] [associations]
symbol:gtf2a1 "transcription initiation factor IIA
alpha chain" species:44689 "Dictyostelium discoideum" [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA;ISS] [GO:0005672 "transcription factor TFIIA complex"
evidence=IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR004855 InterPro:IPR009088 InterPro:IPR013028
Pfam:PF03153 dictyBase:DDB_G0290327 GO:GO:0006355
GenomeReviews:CM000154_GR GO:GO:0006367 EMBL:AAFI02000162
eggNOG:COG5149 GO:GO:0005672 Gene3D:2.30.18.10 SUPFAM:SSF50784
RefSeq:XP_635803.1 HSSP:P52655 ProteinModelPortal:Q54G80 SMR:Q54G80
STRING:Q54G80 EnsemblProtists:DDB0216284 GeneID:8627608
KEGG:ddi:DDB_G0290327 KO:K03122 Gene3D:1.10.287.100
PANTHER:PTHR12694 Uniprot:Q54G80
Length = 310
Score = 147 (56.8 bits), Expect = 9.1e-12, Sum P(3) = 9.1e-12
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 362 QHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGE 403
+H VL Q++KV+R K++ KC KDGIMH+N KD LFNKA GE
Sbjct: 265 EHFVLCQYEKVSRIKNKRKCNFKDGIMHLNGKDTLFNKANGE 306
Score = 65 (27.9 bits), Expect = 9.1e-12, Sum P(3) = 9.1e-12
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 9 VYIRVIEDVISKVRDEFVNNGP----GESVLNELQGIWEMKMIQAGVIIDRTSAPKQPA 63
VY ++ DVI ++ N+ ES+++E+Q +W ++ Q G I ++ + A
Sbjct: 6 VYKYIVFDVIRNIKSNIKNDSDTENVDESIIDEIQTMWLDRLTQTGAISNQNDPDETTA 64
Score = 39 (18.8 bits), Expect = 9.1e-12, Sum P(3) = 9.1e-12
Identities = 8/14 (57%), Positives = 8/14 (57%)
Query: 227 NGGYNIPQQDGAGD 240
NG IPQ DG D
Sbjct: 214 NGDEVIPQNDGLND 227
>ZFIN|ZDB-GENE-060929-28 [details] [associations]
symbol:zgc:154100 "zgc:154100" species:7955 "Danio
rerio" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0005672 "transcription factor TFIIA complex" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA]
InterPro:IPR004855 InterPro:IPR008968 InterPro:IPR009083
InterPro:IPR009088 InterPro:IPR012320 InterPro:IPR013028
Pfam:PF00928 Pfam:PF03153 PROSITE:PS51070 PROSITE:PS51072
ZFIN:ZDB-GENE-060929-28 GO:GO:0006886 GO:GO:0006897 GO:GO:0006367
GO:GO:0030131 SUPFAM:SSF49447 GeneTree:ENSGT00530000063152
GO:GO:0005672 Gene3D:2.30.18.10 SUPFAM:SSF50784 SUPFAM:SSF47396
Gene3D:1.10.287.100 PANTHER:PTHR12694 EMBL:FP102515 IPI:IPI00994361
Ensembl:ENSDART00000093247 Bgee:F1R8F7 Uniprot:F1R8F7
Length = 917
Score = 127 (49.8 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 21/47 (44%), Positives = 36/47 (76%)
Query: 360 NTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
+T+++++ Q+DK+ R+K+RWK LKDG+M KD +F+KA GE ++
Sbjct: 871 DTENVIVCQYDKIHRSKNRWKFYLKDGVMCYGGKDYVFSKAVGEAEW 917
Score = 92 (37.4 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 9 VYIRVIEDVISKVRDEFVNNGPGESVLNEL-QGIWEMKMIQAGVI 52
+Y+ VIEDV+ VR+ F + G E VL L Q +WE K++Q+ +
Sbjct: 469 LYLSVIEDVLESVRELFQDEGVEERVLEHLRQQLWESKVVQSKAV 513
Score = 51 (23.0 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 260 VTTANREIFANLASSSVKIPQLDGPIPDP 288
VT + + A + V +PQL +PDP
Sbjct: 607 VTRGAQHVLTRPAQAPVTLPQLPARLPDP 635
Score = 44 (20.5 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 221 FPAQYHNGGYNIPQQDGAGDAMSEIFELEVSE 252
FP + +IPQ DGA D+ + E + E
Sbjct: 768 FPQLSFSPLLDIPQLDGAADSSDSLEEEDEDE 799
>MGI|MGI:1919078 [details] [associations]
symbol:Gtf2a1l "general transcription factor IIA, 1-like"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005672 "transcription
factor TFIIA complex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR004855
InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR013028
Pfam:PF03153 MGI:MGI:1919078 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0006367 GeneTree:ENSGT00530000063152
eggNOG:COG5149 OrthoDB:EOG4D7Z4V GO:GO:0005672 Gene3D:2.30.18.10
SUPFAM:SSF50784 SUPFAM:SSF47396 KO:K03122 Gene3D:1.10.287.100
PANTHER:PTHR12694 HOGENOM:HOG000015236 HOVERGEN:HBG052771 CTD:11036
EMBL:AF250835 EMBL:AF452125 EMBL:AK005881 EMBL:BC050756
IPI:IPI00321094 RefSeq:NP_076119.2 UniGene:Mm.61330
ProteinModelPortal:Q8R4I4 SMR:Q8R4I4 MINT:MINT-1348145
STRING:Q8R4I4 PhosphoSite:Q8R4I4 PRIDE:Q8R4I4 DNASU:71828
Ensembl:ENSMUST00000024970 GeneID:71828 KEGG:mmu:71828
UCSC:uc008dvt.2 InParanoid:Q8R4I4 OMA:IRDADEN NextBio:334620
Bgee:Q8R4I4 CleanEx:MM_GTF2A1L Genevestigator:Q8R4I4
GermOnline:ENSMUSG00000024154 Uniprot:Q8R4I4
Length = 468
Score = 121 (47.7 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 20/47 (42%), Positives = 35/47 (74%)
Query: 360 NTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
+T+++++ Q+DK+ R+K+RWK LKDG+M +D +F KA GE ++
Sbjct: 422 DTENVIVCQYDKIHRSKNRWKFYLKDGVMCFGGRDYVFAKAIGEAEW 468
Score = 97 (39.2 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 9 VYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQA 49
+Y VIEDVI VRD F G E VL +L+ +WE K++Q+
Sbjct: 10 LYQSVIEDVIEGVRDLFAEEGIEEQVLKDLKKLWETKVLQS 50
>WB|WBGene00004136 [details] [associations]
symbol:pqn-51 species:6239 "Caenorhabditis elegans"
[GO:0005672 "transcription factor TFIIA complex" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] InterPro:IPR004855
InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR013028
Pfam:PF03153 GO:GO:0009792 GO:GO:0006367
GeneTree:ENSGT00530000063152 eggNOG:COG5149 GO:GO:0005672
Gene3D:2.30.18.10 SUPFAM:SSF50784 SUPFAM:SSF47396 HSSP:P52655
KO:K03122 Gene3D:1.10.287.100 PANTHER:PTHR12694 OMA:DGIMHID
EMBL:FO080527 PIR:T32660 RefSeq:NP_504355.1
ProteinModelPortal:O44625 SMR:O44625 STRING:O44625 PaxDb:O44625
EnsemblMetazoa:K11D12.2.1 EnsemblMetazoa:K11D12.2.2
EnsemblMetazoa:K11D12.2.3 EnsemblMetazoa:K11D12.2.4 GeneID:178893
KEGG:cel:CELE_K11D12.2 UCSC:K11D12.2.1 CTD:178893 WormBase:K11D12.2
HOGENOM:HOG000018626 InParanoid:O44625 NextBio:903012
Uniprot:O44625
Length = 354
Score = 133 (51.9 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 363 HLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
++V+ QF+KV R +++WK LKDGIMHI+ KD F K TGE ++
Sbjct: 311 NVVMCQFEKVNRARTKWKFQLKDGIMHIDKKDYCFQKCTGEAEW 354
Score = 79 (32.9 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 18/56 (32%), Positives = 34/56 (60%)
Query: 9 VYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQAGVIIDRTSAPKQPAP 64
+Y V+ DVI+ +++ F++ VL++L+ WE K+ +G + ++AP PAP
Sbjct: 10 LYKSVMADVIANMKEAFLDENIDVDVLSQLRKEWEDKVNSSGCVDLESNAPP-PAP 64
>RGD|1308625 [details] [associations]
symbol:Gtf2a1l "general transcription factor IIA, 1-like"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005672 "transcription factor TFIIA complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR004855 InterPro:IPR009083
InterPro:IPR009088 InterPro:IPR013028 Pfam:PF03153 RGD:1308625
GO:GO:0006367 EMBL:CH473947 GeneTree:ENSGT00530000063152
eggNOG:COG5149 OrthoDB:EOG4D7Z4V GO:GO:0005672 Gene3D:2.30.18.10
SUPFAM:SSF50784 SUPFAM:SSF47396 KO:K03122 Gene3D:1.10.287.100
PANTHER:PTHR12694 HOGENOM:HOG000015236 HOVERGEN:HBG052771 CTD:11036
OMA:IRDADEN EMBL:BC082104 IPI:IPI00363487 RefSeq:NP_001012136.1
UniGene:Rn.201753 SMR:Q641W8 STRING:Q641W8
Ensembl:ENSRNOT00000022380 GeneID:316711 KEGG:rno:316711
UCSC:RGD:1308625 InParanoid:Q641W8 NextBio:671154
Genevestigator:Q641W8 Uniprot:Q641W8
Length = 468
Score = 119 (46.9 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 20/47 (42%), Positives = 34/47 (72%)
Query: 360 NTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
+T ++++ Q+DK+ R+K+RWK LKDG+M +D +F KA GE ++
Sbjct: 422 DTDNVIVCQYDKIHRSKNRWKFYLKDGVMCFGGRDYVFAKAIGEAEW 468
Score = 97 (39.2 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 9 VYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQA 49
+Y VIEDVI VRD F G E VL +L+ +WE K++Q+
Sbjct: 10 LYRSVIEDVIEGVRDLFAEEGIEEQVLKDLKKLWETKVLQS 50
>UNIPROTKB|F1PKI8 [details] [associations]
symbol:STON1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005672 "transcription
factor TFIIA complex" evidence=IEA] InterPro:IPR004855
InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR013028
Pfam:PF03153 GO:GO:0006367 GeneTree:ENSGT00530000063152
GO:GO:0005672 Gene3D:2.30.18.10 SUPFAM:SSF50784 SUPFAM:SSF47396
KO:K03122 Gene3D:1.10.287.100 PANTHER:PTHR12694 CTD:11036
OMA:IRDADEN EMBL:AAEX03007508 RefSeq:NP_001191772.1
Ensembl:ENSCAFT00000004251 GeneID:100534007 KEGG:cfa:100534007
Uniprot:F1PKI8
Length = 476
Score = 113 (44.8 bits), Expect = 5.5e-10, Sum P(3) = 5.5e-10
Identities = 18/47 (38%), Positives = 34/47 (72%)
Query: 360 NTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
+T ++++ Q+DK+ R+K++WK LKDG+M +D +F KA G+ ++
Sbjct: 430 DTDNVIVCQYDKIHRSKNKWKFYLKDGVMCFGGRDYVFAKAIGDAEW 476
Score = 97 (39.2 bits), Expect = 5.5e-10, Sum P(3) = 5.5e-10
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 9 VYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQA 49
+Y VIEDVI VRD F G E VL +L+ +WE K++Q+
Sbjct: 10 LYRSVIEDVIEGVRDLFAEEGIEEQVLKDLKQLWETKVLQS 50
Score = 41 (19.5 bits), Expect = 5.5e-10, Sum P(3) = 5.5e-10
Identities = 26/79 (32%), Positives = 38/79 (48%)
Query: 232 IPQQDGAGDAMS--EIF---ELEVSEFPG----------RQDSVTTANREIFANLASSSV 276
I Q DG GDA S EI +++ +EF G +++ + +N + AN SS
Sbjct: 344 IIQIDGTGDASSNDEIGSTRDVDENEFLGIIDAGDLKVLEEEADSISNEDSTAN--SSDN 401
Query: 277 KIPQLDGPIPDPY---DDV 292
+ PQ+D DP DDV
Sbjct: 402 EDPQIDIVEEDPLNSGDDV 420
>UNIPROTKB|F1MSE9 [details] [associations]
symbol:GTF2A1L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006367 "transcription initiation from RNA polymerase
II promoter" evidence=IEA] [GO:0005672 "transcription factor TFIIA
complex" evidence=IEA] InterPro:IPR004855 InterPro:IPR009083
InterPro:IPR009088 InterPro:IPR013028 Pfam:PF03153 GO:GO:0006367
GeneTree:ENSGT00530000063152 GO:GO:0005672 Gene3D:2.30.18.10
SUPFAM:SSF50784 SUPFAM:SSF47396 Gene3D:1.10.287.100
PANTHER:PTHR12694 OMA:IRDADEN EMBL:DAAA02030760 IPI:IPI00696476
UniGene:Bt.104044 Ensembl:ENSBTAT00000005456 Uniprot:F1MSE9
Length = 388
Score = 106 (42.4 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 363 HLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
++++ Q+DK+ R+K +WK LKDG+M +D +F KA G+ ++
Sbjct: 345 NVIVCQYDKIHRSKDKWKFYLKDGVMCFGGRDYVFAKAIGDAEW 388
Score = 98 (39.6 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 9 VYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQA 49
+Y VIEDVI VRD F G E VL +L+ +WE K++Q+
Sbjct: 10 LYRSVIEDVIEGVRDLFAEEGVEEQVLKDLKQLWETKVLQS 50
>UNIPROTKB|Q9UNN4 [details] [associations]
symbol:GTF2A1L "TFIIA-alpha and beta-like factor"
species:9606 "Homo sapiens" [GO:0005672 "transcription factor TFIIA
complex" evidence=IEA] [GO:0006367 "transcription initiation from
RNA polymerase II promoter" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] InterPro:IPR004855
InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR013028
Pfam:PF03153 GO:GO:0006355 GO:GO:0003677 GO:GO:0003713
GO:GO:0006366 GO:GO:0006367 EMBL:AF026169 UniGene:Hs.732016
eggNOG:COG5149 GermOnline:ENSG00000068781 GO:GO:0005672
Gene3D:2.30.18.10 SUPFAM:SSF50784 SUPFAM:SSF47396 KO:K03122
Gene3D:1.10.287.100 PANTHER:PTHR12694 HOGENOM:HOG000015236
HOVERGEN:HBG052771 EMBL:AF106857 EMBL:AK223350 EMBL:AK302220
EMBL:BC025991 EMBL:BC064585 IPI:IPI00009269 IPI:IPI00893167
RefSeq:NP_001180416.1 RefSeq:NP_006863.2 ProteinModelPortal:Q9UNN4
SMR:Q9UNN4 STRING:Q9UNN4 PhosphoSite:Q9UNN4 DMDM:13124585
PaxDb:Q9UNN4 PRIDE:Q9UNN4 Ensembl:ENST00000403751
Ensembl:ENST00000430487 GeneID:11036 KEGG:hsa:11036 UCSC:uc002rws.2
UCSC:uc010yom.2 CTD:11036 GeneCards:GC02P048844 HGNC:HGNC:30727
MIM:605358 neXtProt:NX_Q9UNN4 PharmGKB:PA162390383 GenomeRNAi:11036
NextBio:41940 ArrayExpress:Q9UNN4 Bgee:Q9UNN4 CleanEx:HS_GTF2A1L
Genevestigator:Q9UNN4 Uniprot:Q9UNN4
Length = 478
Score = 113 (44.8 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 18/47 (38%), Positives = 34/47 (72%)
Query: 360 NTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
+T ++++ Q+DK+ R+K++WK LKDG+M +D +F KA G+ ++
Sbjct: 432 DTDNVIVCQYDKIHRSKNKWKFYLKDGVMCFGGRDYVFAKAIGDAEW 478
Score = 92 (37.4 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 9 VYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQA 49
+Y VIEDVI VR+ F G E VL +L+ +WE K++Q+
Sbjct: 10 LYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQS 50
>ASPGD|ASPL0000056854 [details] [associations]
symbol:AN0816 species:162425 "Emericella nidulans"
[GO:0005672 "transcription factor TFIIA complex" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0001129
"TBP-class protein binding RNA polymerase II transcription factor
activity involved in preinitiation complex assembly" evidence=IEA]
[GO:0051123 "RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] InterPro:IPR004855
InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR013028
Pfam:PF03153 EMBL:BN001308 EMBL:AACD01000013 GO:GO:0006367
eggNOG:COG5149 GO:GO:0005672 Gene3D:2.30.18.10 SUPFAM:SSF50784
SUPFAM:SSF47396 KO:K03122 Gene3D:1.10.287.100 PANTHER:PTHR12694
OrthoDB:EOG4QG0PR RefSeq:XP_658420.1 ProteinModelPortal:Q5BF64
SMR:Q5BF64 EnsemblFungi:CADANIAT00001844 GeneID:2876593
KEGG:ani:AN0816.2 HOGENOM:HOG000204802 OMA:DGIMHID Uniprot:Q5BF64
Length = 419
Score = 122 (48.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 20/43 (46%), Positives = 31/43 (72%)
Query: 364 LVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
++L +DKV R K++WKC LKDGI+ K+ +F+K GEF++
Sbjct: 377 VMLCTYDKVQRVKNKWKCTLKDGILTTGGKEYVFHKGQGEFEW 419
Score = 77 (32.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 21/69 (30%), Positives = 33/69 (47%)
Query: 7 GMVYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQAGVIIDRTSAPKQPAPGG 66
G V+ RVI++V + +F +G + L++L+ W+ K+ GV P PAP
Sbjct: 11 GTVFERVIQEVCDASQVDFEESGVDQQTLSDLRKSWQKKLSSLGV----AHFPWDPAP-- 64
Query: 67 PITPVHDLN 75
P P N
Sbjct: 65 PQAPAQTQN 73
>UNIPROTKB|E1BRM0 [details] [associations]
symbol:STON1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005672 "transcription factor TFIIA complex"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR004855 InterPro:IPR008968 InterPro:IPR009083
InterPro:IPR009088 InterPro:IPR012320 InterPro:IPR013028
Pfam:PF00928 Pfam:PF03153 PROSITE:PS51070 PROSITE:PS51072
GO:GO:0006886 GO:GO:0006897 GO:GO:0006367 GO:GO:0030131
SUPFAM:SSF49447 GeneTree:ENSGT00530000063152 GO:GO:0005672
Gene3D:2.30.18.10 SUPFAM:SSF50784 SUPFAM:SSF47396
Gene3D:1.10.287.100 OMA:CKLELGS EMBL:AADN02036286 IPI:IPI00572948
Ensembl:ENSGALT00000014803 Uniprot:E1BRM0
Length = 1194
Score = 121 (47.7 bits), Expect = 3.1e-08, Sum P(3) = 3.1e-08
Identities = 19/47 (40%), Positives = 35/47 (74%)
Query: 360 NTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
+T ++++ Q++K+ R+K++WK LKDG+M N KD +F KA G+ ++
Sbjct: 1148 DTNNVIVCQYEKIHRSKNKWKFFLKDGVMSFNGKDYVFAKAVGDAEW 1194
Score = 82 (33.9 bits), Expect = 3.1e-08, Sum P(3) = 3.1e-08
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 9 VYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQA 49
+Y VIEDVI ++ F G + VL L+ +WE K++Q+
Sbjct: 711 LYKSVIEDVIESIQGLFAEEGVDKQVLRNLKELWETKVMQS 751
Score = 44 (20.5 bits), Expect = 3.1e-08, Sum P(3) = 3.1e-08
Identities = 24/97 (24%), Positives = 40/97 (41%)
Query: 237 GAGDAMSEIFELEVSEFPGRQDSVTTANREIFANLASSSVKIPQ--LDGPIPDPYDDVLS 294
G GDA L+ P Q SV N A + +SSV+ L + V+
Sbjct: 848 GQGDASILQHPLQQVFQPIGQPSVLKTNLATVAPVRTSSVQATAEILQTQKTEVQQTVVF 907
Query: 295 TPNIYNYQGVVNEDYNIV-NTPAPNDIQASTPAVVTQ 330
P+ ++ + N ++ PA + + +T AV+ Q
Sbjct: 908 QPSAFHNKHPENSTNTVLFQQPAVSQQEIATNAVLNQ 944
>UNIPROTKB|Q53S48 [details] [associations]
symbol:ALF "Putative uncharacterized protein ALF"
species:9606 "Homo sapiens" [GO:0005672 "transcription factor TFIIA
complex" evidence=IEA] [GO:0006367 "transcription initiation from
RNA polymerase II promoter" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006897
"endocytosis" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] InterPro:IPR004855 InterPro:IPR008968
InterPro:IPR009083 InterPro:IPR009088 InterPro:IPR012320
InterPro:IPR013028 Pfam:PF00928 Pfam:PF03153 PROSITE:PS51070
PROSITE:PS51072 GO:GO:0006886 GO:GO:0006897 GO:GO:0006367
GO:GO:0030131 SUPFAM:SSF49447 EMBL:AC073082 EMBL:AC087816
EMBL:AC091788 UniGene:Hs.732016 GO:GO:0005672 Gene3D:2.30.18.10
SUPFAM:SSF50784 SUPFAM:SSF47396 Gene3D:1.10.287.100 IPI:IPI00337314
RefSeq:NP_758515.1 SMR:Q53S48 STRING:Q53S48 Ensembl:ENST00000309827
Ensembl:ENST00000394754 Ensembl:ENST00000405008 GeneID:286749
KEGG:hsa:286749 UCSC:uc002rwp.2 CTD:286749 HGNC:HGNC:30651
PharmGKB:PA162405016 HOVERGEN:HBG054132 OMA:CKLELGS
GenomeRNAi:286749 NextBio:96286 Uniprot:Q53S48
Length = 1182
Score = 113 (44.8 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 18/47 (38%), Positives = 34/47 (72%)
Query: 360 NTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
+T ++++ Q+DK+ R+K++WK LKDG+M +D +F KA G+ ++
Sbjct: 1136 DTDNVIVCQYDKIHRSKNKWKFYLKDGVMCFGGRDYVFAKAIGDAEW 1182
Score = 92 (37.4 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 9 VYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQA 49
+Y VIEDVI VR+ F G E VL +L+ +WE K++Q+
Sbjct: 714 LYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQS 754
>UNIPROTKB|I3LE29 [details] [associations]
symbol:GTF2A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006367 "transcription initiation from RNA polymerase
II promoter" evidence=IEA] [GO:0005672 "transcription factor TFIIA
complex" evidence=IEA] InterPro:IPR004855 InterPro:IPR009088
Pfam:PF03153 GO:GO:0006367 GeneTree:ENSGT00530000063152
GO:GO:0005672 Gene3D:2.30.18.10 SUPFAM:SSF50784 PANTHER:PTHR12694
EMBL:CU407292 Ensembl:ENSSSCT00000029391 Uniprot:I3LE29
Length = 317
Score = 133 (51.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 21/47 (44%), Positives = 39/47 (82%)
Query: 360 NTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
+T+++V+ Q+DK+ R+K++WK LKDGIM++N +D +F+KA G+ ++
Sbjct: 271 DTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIFSKAIGDAEW 317
Score = 41 (19.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 212 SAGKRKREDFPAQYHNGGYNIPQQDGAGDAMSEIFELEVSEF 253
+ G+++ + PAQ + Q DG GD SE E E ++
Sbjct: 193 ATGQQQPQAQPAQQQ--APLVLQVDGTGDTSSEEDEDEEEDY 232
>UNIPROTKB|F1SE01 [details] [associations]
symbol:GTF2A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006367 "transcription initiation from RNA polymerase
II promoter" evidence=IEA] [GO:0005672 "transcription factor TFIIA
complex" evidence=IEA] InterPro:IPR004855 InterPro:IPR009088
Pfam:PF03153 GO:GO:0006367 GeneTree:ENSGT00530000063152
GO:GO:0005672 Gene3D:2.30.18.10 SUPFAM:SSF50784 PANTHER:PTHR12694
OMA:HMSATGM EMBL:CU407292 Ensembl:ENSSSCT00000002680 Uniprot:F1SE01
Length = 332
Score = 133 (51.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 21/47 (44%), Positives = 39/47 (82%)
Query: 360 NTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
+T+++V+ Q+DK+ R+K++WK LKDGIM++N +D +F+KA G+ ++
Sbjct: 286 DTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIFSKAIGDAEW 332
Score = 41 (19.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 212 SAGKRKREDFPAQYHNGGYNIPQQDGAGDAMSEIFELEVSEF 253
+ G+++ + PAQ + Q DG GD SE E E ++
Sbjct: 208 ATGQQQPQAQPAQQQ--APLVLQVDGTGDTSSEEDEDEEEDY 247
>UNIPROTKB|F1NKT1 [details] [associations]
symbol:GTF2A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005672 "transcription factor TFIIA complex"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR004855
InterPro:IPR009088 Pfam:PF03153 GO:GO:0003677 GO:GO:0006367
GeneTree:ENSGT00530000063152 GO:GO:0005672 Gene3D:2.30.18.10
SUPFAM:SSF50784 PANTHER:PTHR12694 EMBL:AADN02003552 IPI:IPI00821799
Ensembl:ENSGALT00000017211 ArrayExpress:F1NKT1 Uniprot:F1NKT1
Length = 333
Score = 132 (51.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 21/47 (44%), Positives = 39/47 (82%)
Query: 360 NTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406
+T+++V+ Q+DK+ R+K++WK LKDGIM++N +D +F+KA G+ ++
Sbjct: 287 DTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYVFSKAIGDAEW 333
Score = 42 (19.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 234 QQDGAGDAMSEIFELEVSEF 253
Q DGAGD SE E E ++
Sbjct: 229 QVDGAGDTSSEEEEDEEEDY 248
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.132 0.383 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 406 306 0.00099 115 3 11 23 0.47 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 30
No. of states in DFA: 601 (64 KB)
Total size of DFA: 206 KB (2115 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.18u 0.10s 24.28t Elapsed: 00:00:03
Total cpu time: 24.18u 0.10s 24.28t Elapsed: 00:00:03
Start: Sat May 11 01:22:10 2013 End: Sat May 11 01:22:13 2013