Query 015446
Match_columns 406
No_of_seqs 112 out of 236
Neff 6.0
Searched_HMMs 13730
Date Mon Mar 25 12:46:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015446.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015446hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1jv2a2 b.1.15.1 (A:599-737) T 74.7 12 0.00084 29.7 10.2 85 41-139 19-104 (139)
2 d3b7sa2 b.98.1.1 (A:1-208) Leu 72.6 24 0.0017 29.1 12.5 94 29-138 13-108 (208)
3 d1e42a1 b.1.10.1 (A:705-824) B 33.8 22 0.0016 27.8 4.5 62 49-144 31-92 (120)
4 d1x9la_ b.2.10.1 (A:) Hypothet 19.7 48 0.0035 26.4 4.2 25 112-136 106-130 (149)
5 d2bi0a1 d.38.1.4 (A:8-185) Hyp 13.7 1.6E+02 0.012 23.3 6.2 33 114-146 86-118 (178)
6 d1pfoa_ f.9.1.1 (A:) Perfringo 12.0 1.2E+02 0.0091 28.5 5.5 55 329-390 371-426 (471)
7 d2pr9a1 b.2.7.1 (A:159-435) Se 11.5 1.1E+02 0.0077 26.1 4.6 35 357-392 145-180 (277)
8 d1t6aa_ d.129.8.1 (A:) Rbstp22 11.3 36 0.0026 26.5 1.0 31 351-385 61-91 (124)
9 d1jz8a2 b.1.4.1 (A:626-730) be 11.2 2.2E+02 0.016 20.3 5.9 43 116-158 53-97 (105)
10 d1mvma_ b.121.5.2 (A:) Parvovi 11.1 23 0.0017 34.6 -0.3 16 317-332 435-450 (549)
No 1
>d1jv2a2 b.1.15.1 (A:599-737) Thigh, calf-1 and calf-2 domains of integrin alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.68 E-value=12 Score=29.68 Aligned_cols=85 Identities=18% Similarity=0.307 Sum_probs=54.2
Q ss_pred EEcCCCeEEEEEEEEEEeCCCCC-ccEEEEEcCCCCCcceEEEEEEeccCccccceeeeeeeeeecCCCCCCCceEEEEE
Q 015446 41 IDLSTHIVKVFLTLKVENTGKTS-ASEILLAFPPTQVDHLAFLEALAATGKKKKKTYVSLAVKPTQLPDAPNETNYYTIV 119 (406)
Q Consensus 41 IDL~~~~vk~~~~i~vkN~g~~p-~~~y~~~l~~~~~~~ls~~~a~~~~~~~~~~~~~~L~v~~~~~~~~~~~~~~~~I~ 119 (406)
+-+++. -...++++|+|.|+.+ .+..++.+|++ |.|..+....... ..+.+.... ..+.....-.
T Consensus 19 l~vGs~-~~l~l~v~V~N~GE~AY~a~l~v~~P~~----L~y~~v~~~~~~~-----~~v~C~~~~----~~~~~~v~C~ 84 (139)
T d1jv2a2 19 IYIGDD-NPLTLIVKAQNQGEGAYEAELIVSIPLQ----ADFIGVVRNNEAL-----ARLSCAFKT----ENQTRQVVCD 84 (139)
T ss_dssp EESSSC-EEEEEEEEEEECSSCBSSCEEEEECCTT----CCEEEECCSSTTS-----BCCCCEEEE----SSSCEEEEEE
T ss_pred EEECCC-CEEEEEEEEEECCCChhhEEEEEEcCCC----CCEEeeeecCCCC-----ceeeccccC----CCCcEEEEEE
Confidence 335544 4688899999998654 45556778854 6666553222111 234555432 1233467889
Q ss_pred eCCCCCCCCeEEEEEEEEEc
Q 015446 120 LANPLNTGETATLEILYILT 139 (406)
Q Consensus 120 Lp~pl~~g~~~~l~v~~~~~ 139 (406)
|..|++.|+++++.+.+-..
T Consensus 85 lGnP~~~~~~~~f~l~f~~~ 104 (139)
T d1jv2a2 85 LGNPMKAGTQLLAGLRFSVH 104 (139)
T ss_dssp CCSSBCSSCBCCEEEEEEEC
T ss_pred CCCcccCCCEEEEEEEEEee
Confidence 99999999999998887654
No 2
>d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.62 E-value=24 Score=29.07 Aligned_cols=94 Identities=12% Similarity=0.155 Sum_probs=57.0
Q ss_pred CCCeEEee--EEEEEEcCCCeEEEEEEEEEEeCCCCCccEEEEEcCCCCCcceEEEEEEeccCccccceeeeeeeeeecC
Q 015446 29 SHQIRINN--AERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEALAATGKKKKKTYVSLAVKPTQL 106 (406)
Q Consensus 29 ~~~~~n~~--v~R~IDL~~~~vk~~~~i~vkN~g~~p~~~y~~~l~~~~~~~ls~~~a~~~~~~~~~~~~~~L~v~~~~~ 106 (406)
...++.+. ++=++|+.+....-+++|+++-..+ ..++..+.. .++..-++.+.+.+ +......
T Consensus 13 ~~~~~v~Hy~L~l~~d~~~~~~~G~v~I~~~~~~~-~~~~i~Ld~-----~~l~I~~v~~~g~~--------~~~~~~~- 77 (208)
T d3b7sa2 13 ASVCRTKHLHLRCSVDFTRRTLTGTAALTVQSQED-NLRSLVLDT-----KDLTIEKVVINGQE--------VKYALGE- 77 (208)
T ss_dssp TTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECST-TEEEEEEEE-----SSCEEEEEEETTEE--------CCEEECC-
T ss_pred cccceEEEEEEEEEEcCCCCEEEEEEEEEEEECcC-CccEeeeec-----cCCEEEEEEECCcc--------cceEecc-
Confidence 33445554 4567788888888888888875432 345544432 23555556554422 2222111
Q ss_pred CCCCCCceEEEEEeCCCCCCCCeEEEEEEEEE
Q 015446 107 PDAPNETNYYTIVLANPLNTGETATLEILYIL 138 (406)
Q Consensus 107 ~~~~~~~~~~~I~Lp~pl~~g~~~~l~v~~~~ 138 (406)
..........|.++.++.+|++.+|.|.|..
T Consensus 78 -~~~~~~~~l~i~~~~~~~~g~~~~l~i~y~~ 108 (208)
T d3b7sa2 78 -RQSYKGSPMEISLPIALSKNQEIVIEISFET 108 (208)
T ss_dssp -CCGGGCEEEEEEEEEEECTTCEEEEEEEEEC
T ss_pred -ceeeccceeeeecccccCCCCEEEEEEEEEE
Confidence 0112335678999999999999999999864
No 3
>d1e42a1 b.1.10.1 (A:705-824) Beta2-adaptin AP2 ear domain, N-terminal subdomain {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.84 E-value=22 Score=27.83 Aligned_cols=62 Identities=10% Similarity=0.325 Sum_probs=42.3
Q ss_pred EEEEEEEEEeCCCCCccEEEEEcCCCCCcceEEEEEEeccCccccceeeeeeeeeecCCCCCCCceEEEEEeCCCCCCCC
Q 015446 49 KVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEALAATGKKKKKTYVSLAVKPTQLPDAPNETNYYTIVLANPLNTGE 128 (406)
Q Consensus 49 k~~~~i~vkN~g~~p~~~y~~~l~~~~~~~ls~~~a~~~~~~~~~~~~~~L~v~~~~~~~~~~~~~~~~I~Lp~pl~~g~ 128 (406)
++..+++++|.+..+.+.|.+.|.+.-+. |. +.. . ..+|.||.||+
T Consensus 31 ~i~l~l~itN~s~~~ls~faIQfNKNsFG---------------------L~--P~~----~-------l~~p~~l~pgq 76 (120)
T d1e42a1 31 HIYMEMNFTNKALQHMTDFAIQFNKNSFG---------------------VI--PST----P-------LAIHTPLMPNQ 76 (120)
T ss_dssp EEEEEEEEEECSSSCBCCCEEEECCBTTC---------------------CE--ESS----C-------CCCCSCBCTTC
T ss_pred EEEEEEEEecCCCCccchheEEEcccccc---------------------cc--cCC----c-------ccCCCccCCCC
Confidence 45689999999888888887777643221 11 100 0 12578899999
Q ss_pred eEEEEEEEEEcccccc
Q 015446 129 TATLEILYILTHSLEP 144 (406)
Q Consensus 129 ~~~l~v~~~~~~~~~P 144 (406)
+++..+-..+......
T Consensus 77 S~~~~lpl~~~~~~~~ 92 (120)
T d1e42a1 77 SIDVSLPLNTLGPVMK 92 (120)
T ss_dssp EEEEEEEEESCSCBCC
T ss_pred EEEEEEEEecCCcccC
Confidence 9999998887765443
No 4
>d1x9la_ b.2.10.1 (A:) Hypothetical protein DR1885 {Deinococcus radiodurans [TaxId: 1299]}
Probab=19.71 E-value=48 Score=26.41 Aligned_cols=25 Identities=24% Similarity=0.372 Sum_probs=18.7
Q ss_pred CceEEEEEeCCCCCCCCeEEEEEEE
Q 015446 112 ETNYYTIVLANPLNTGETATLEILY 136 (406)
Q Consensus 112 ~~~~~~I~Lp~pl~~g~~~~l~v~~ 136 (406)
+...-...|..||++|+++.|++.+
T Consensus 106 G~HlML~gl~~~l~~Gd~v~ltL~f 130 (149)
T d1x9la_ 106 GDHVMLMGLKRPLKVGETVNITLKA 130 (149)
T ss_dssp SSEEEEEEECSCCCTTEEEEEEECB
T ss_pred ceEEEEcCCCCCCCCCCEEEEEEEE
Confidence 4456667788999999988877643
No 5
>d2bi0a1 d.38.1.4 (A:8-185) Hypothetical protein Rv0216/MT0226 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=13.69 E-value=1.6e+02 Score=23.30 Aligned_cols=33 Identities=15% Similarity=0.095 Sum_probs=25.5
Q ss_pred eEEEEEeCCCCCCCCeEEEEEEEEEcccccccC
Q 015446 114 NYYTIVLANPLNTGETATLEILYILTHSLEPFP 146 (406)
Q Consensus 114 ~~~~I~Lp~pl~~g~~~~l~v~~~~~~~~~P~P 146 (406)
.+-.+++.+|+.+|++++..++..=...-+..|
T Consensus 86 g~~~~rf~~PV~~GDTl~~~~eV~~~r~~~srp 118 (178)
T d2bi0a1 86 FYRGLRFHRFPAVGDTLYTRTEVVGLRANSPKP 118 (178)
T ss_dssp EEECEEBSSCCBTTCEEEEEEEEEEEEECCCCT
T ss_pred EeeeeEEeeeccCCCEEEEEEEEEEEEecCCCC
Confidence 345689999999999999999887665554444
No 6
>d1pfoa_ f.9.1.1 (A:) Perfringolysin {Clostridium perfringens [TaxId: 1502]}
Probab=12.04 E-value=1.2e+02 Score=28.50 Aligned_cols=55 Identities=13% Similarity=0.248 Sum_probs=35.7
Q ss_pred CCceeeEEEeecCCcccceeeccCCceEEE-EEccCCCcceEEEEEEEEEEecCCCcccceee
Q 015446 329 GGWRATFVIGYGLPLEDFLFESSDGRRYLN-FTFGCPLVETVVDKLTIKVSCVAGRSKRPFCC 390 (406)
Q Consensus 329 GGWk~~FtiGyn~pl~~~L~~~~~~~~yL~-vp~~~~~~d~~~d~~~l~IiLPEG~A~~i~v~ 390 (406)
||.=..|.|-|. ++-+ +.+|+..+. -.-.-.-.| ---+++..|.||.+ |+||+|.
T Consensus 371 g~yva~f~i~wd----e~~y-d~~g~e~~~~k~w~gn~~~-~ta~f~t~i~l~~n-arni~v~ 426 (471)
T d1pfoa_ 371 GAYVAQFEVAWD----EVSY-DKEGNEVLTHKTWDGNYQD-KTAHYSTVIPLEAN-ARNIRIK 426 (471)
T ss_dssp CSSCEEEEEEEE----EEEE-CTTSCEEEEEEECTTTTCC-BCSSEEEEEEECTT-EEEEEEE
T ss_pred ceEEEEEEEEee----eccc-CCCCcEecccccccCCCcc-ccccceEEEecCCC-ceeeEEE
Confidence 888889999998 3443 355665532 222112222 22467889999999 9999985
No 7
>d2pr9a1 b.2.7.1 (A:159-435) Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=11.48 E-value=1.1e+02 Score=26.12 Aligned_cols=35 Identities=6% Similarity=0.202 Sum_probs=25.3
Q ss_pred EEEEccCCC-cceEEEEEEEEEEecCCCcccceeecC
Q 015446 357 LNFTFGCPL-VETVVDKLTIKVSCVAGRSKRPFCCCS 392 (406)
Q Consensus 357 L~vp~~~~~-~d~~~d~~~l~IiLPEG~A~~i~v~~P 392 (406)
+.+-+...+ .....+++.++|=+|.+ +.++++.+.
T Consensus 145 ~~i~l~~~~~~~~~~~~v~I~iP~P~~-~~~~~~~~~ 180 (277)
T d2pr9a1 145 VKVVIKSNFKPSLLAQKIEVRIPTPLN-TSGVQVICM 180 (277)
T ss_dssp EEEEEEECSCTTCEEEEEEEEEECCTT-EEEEEEEES
T ss_pred EEEEEEeccCCCeeeeEEEEEeeCCCc-ccCceEEec
Confidence 444444332 46678999999999999 988877554
No 8
>d1t6aa_ d.129.8.1 (A:) Rbstp2229 protein {Bacillus stearothermophilus [TaxId: 1422]}
Probab=11.26 E-value=36 Score=26.46 Aligned_cols=31 Identities=19% Similarity=0.377 Sum_probs=18.6
Q ss_pred cCCceEEEEEccCCCcceEEEEEEEEEEecCCCcc
Q 015446 351 SDGRRYLNFTFGCPLVETVVDKLTIKVSCVAGRSK 385 (406)
Q Consensus 351 ~~~~~yL~vp~~~~~~d~~~d~~~l~IiLPEG~A~ 385 (406)
+++++|=.+-++.+.++ ++--+.|.||+| |+
T Consensus 61 g~~~rY~~I~vgVg~~~---e~sfIqi~LP~~-AT 91 (124)
T d1t6aa_ 61 GDGRLYKGMAISVRTAG---EETFIDIALPPG-AT 91 (124)
T ss_dssp ESSTTCCEEEEEEEEET---TEEEEEEECCTT-CC
T ss_pred cCCCceeeEEEeeccCC---ceeeEEEECCCC-CC
Confidence 45666622233223333 556689999999 86
No 9
>d1jz8a2 b.1.4.1 (A:626-730) beta-Galactosidase, domains 2 and 4 {Escherichia coli [TaxId: 562]}
Probab=11.19 E-value=2.2e+02 Score=20.30 Aligned_cols=43 Identities=9% Similarity=-0.093 Sum_probs=29.5
Q ss_pred EEEEeCCC--CCCCCeEEEEEEEEEcccccccCcccCcCCceeEE
Q 015446 116 YTIVLANP--LNTGETATLEILYILTHSLEPFPVEISQSESQLVY 158 (406)
Q Consensus 116 ~~I~Lp~p--l~~g~~~~l~v~~~~~~~~~P~P~~I~q~e~Q~l~ 158 (406)
-.|.||.. ..++++..|.|++.+.+...=.|+.=..+-.|+.+
T Consensus 53 ~~i~lp~~~~~~~~~e~~L~v~~~l~~~t~wa~aGh~vA~~Q~~L 97 (105)
T d1jz8a2 53 QLIELPELPQPESAGQLWLTVRVVQPNATAWSEAGHISAWQQWRL 97 (105)
T ss_dssp EEEECCCCCCCCSSEEEEEEEEEEECSCCSSSCTTEEEEEEEEEE
T ss_pred EEEEcCCCCcCCCCceEEEEEEEEEcCCCccccCCCEEEeEEEEc
Confidence 36667642 34677888888888887766567766666667665
No 10
>d1mvma_ b.121.5.2 (A:) Parvovirus (panleukopenia virus) capsid protein {Murine minute virus, strain i [TaxId: 10794]}
Probab=11.07 E-value=23 Score=34.63 Aligned_cols=16 Identities=25% Similarity=0.407 Sum_probs=13.6
Q ss_pred EEEEEecCCcccCCce
Q 015446 317 SELEIEPRYPLFGGWR 332 (406)
Q Consensus 317 ~~l~l~PRfPLfGGWk 332 (406)
-.++.+||+|++|||=
T Consensus 435 Pd~dfkp~~p~~gGfg 450 (549)
T d1mvma_ 435 LDLEHKPRLHITAPFV 450 (549)
T ss_dssp CCCSSCCSCCSSCSBC
T ss_pred CCCCcCCCCcccCCcc
Confidence 3577999999999993
Done!