BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015449
(406 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2RGL|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGL|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
Length = 481
Score = 538 bits (1387), Expect = e-153, Method: Compositional matrix adjust.
Identities = 253/402 (62%), Positives = 306/402 (76%), Gaps = 3/402 (0%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
M +LNFDAYRFSISWSRIFP G G+VN +GVAYYN LINYLL++GITPY NLYHYDLP A
Sbjct: 82 MKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLA 141
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
LEKKY G L+ ++ F +YADFCFKTFG+RVK+W TFNEPR+VA LGYD G P RC+
Sbjct: 142 LEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCT 201
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
K GNSATEPYIVAHN +LSHAAAV G++GI+LDF WYE L+ S
Sbjct: 202 KC---AAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALSNS 258
Query: 181 KADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGIN 240
D AAQRARDFH+GW++ P++ G YP+ MQ++V +RLPKFT E+ ++VKGS D++GIN
Sbjct: 259 TEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGIN 318
Query: 241 QYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYI 300
QYTA YM L Q Y DW + + KNG PIGP+ANS WLY VPWGMY + YI
Sbjct: 319 QYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGCVNYI 378
Query: 301 KGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANVVGYFAW 360
K YGNPTV+++ENGMD P N++ + L DTTR+++Y+ YLTQLKKA+D+GANV GYFAW
Sbjct: 379 KQKYGNPTVVITENGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANVAGYFAW 438
Query: 361 SLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLK 402
SLLDNFEW GYTS+FGIVYVDF L+R+PK SAYWF+ +LK
Sbjct: 439 SLLDNFEWLSGYTSKFGIVYVDFNTLERHPKASAYWFRDMLK 480
>pdb|3F4V|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F4V|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3AHT|A Chain A, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHT|B Chain B, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHV|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
pdb|3AHV|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
Length = 481
Score = 537 bits (1383), Expect = e-153, Method: Compositional matrix adjust.
Identities = 252/402 (62%), Positives = 306/402 (76%), Gaps = 3/402 (0%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
M +LNFDAYRFSISWSRIFP G G+VN +GVAYYN LINYLL++GITPY NLYHYDLP A
Sbjct: 82 MKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLA 141
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
LEKKY G L+ ++ F +YADFCFKTFG+RVK+W TFN+PR+VA LGYD G P RC+
Sbjct: 142 LEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNQPRIVALLGYDQGTNPPKRCT 201
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
K GNSATEPYIVAHN +LSHAAAV G++GI+LDF WYE L+ S
Sbjct: 202 KC---AAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALSNS 258
Query: 181 KADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGIN 240
D AAQRARDFH+GW++ P++ G YP+ MQ++V +RLPKFT E+ ++VKGS D++GIN
Sbjct: 259 TEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGIN 318
Query: 241 QYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYI 300
QYTA YM L Q Y DW + + KNG PIGP+ANS WLY VPWGMY + YI
Sbjct: 319 QYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGCVNYI 378
Query: 301 KGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANVVGYFAW 360
K YGNPTV+++ENGMD P N++ + L DTTR+++Y+ YLTQLKKA+D+GANV GYFAW
Sbjct: 379 KQKYGNPTVVITENGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANVAGYFAW 438
Query: 361 SLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLK 402
SLLDNFEW GYTS+FGIVYVDF L+R+PK SAYWF+ +LK
Sbjct: 439 SLLDNFEWLSGYTSKFGIVYVDFNTLERHPKASAYWFRDMLK 480
>pdb|3SCR|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCR|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCS|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCS|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 536 bits (1381), Expect = e-153, Method: Compositional matrix adjust.
Identities = 252/402 (62%), Positives = 305/402 (75%), Gaps = 3/402 (0%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
M +LNFDAYRFSISWSRIFP G G+VN +GVAYYN LINYLL++GITPY NLYHYDLP A
Sbjct: 82 MKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLA 141
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
LEKKY G L+ ++ F +YADFCFKTFG+RVK+W TFNEPR+VA LGYD G P RC+
Sbjct: 142 LEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCT 201
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
K GNSATEPYIVAHN +LSHAAAV G++GI+LDF WYE L+ S
Sbjct: 202 KC---AAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALSNS 258
Query: 181 KADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGIN 240
D AAQRARDFH+GW++ P++ G YP+ MQ++V +RLPKFT E+ ++VKGS D++GIN
Sbjct: 259 TEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGIN 318
Query: 241 QYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYI 300
QYTA YM L Q Y DW + + KNG PIGP+ANS WLY VPWGMY + YI
Sbjct: 319 QYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGCVNYI 378
Query: 301 KGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANVVGYFAW 360
K YGNPTV+++ NGMD P N++ + L DTTR+++Y+ YLTQLKKA+D+GANV GYFAW
Sbjct: 379 KQKYGNPTVVITSNGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANVAGYFAW 438
Query: 361 SLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLK 402
SLLDNFEW GYTS+FGIVYVDF L+R+PK SAYWF+ +LK
Sbjct: 439 SLLDNFEWLSGYTSKFGIVYVDFNTLERHPKASAYWFRDMLK 480
>pdb|3SCP|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCP|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCQ|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCQ|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 536 bits (1380), Expect = e-152, Method: Compositional matrix adjust.
Identities = 252/402 (62%), Positives = 305/402 (75%), Gaps = 3/402 (0%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
M +LNFDAYRFSISWSRIFP G G+VN +GVAYYN LINYLL++GITPY NLYHYDLP A
Sbjct: 82 MKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLA 141
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
LEKKY G L+ ++ F +YADFCFKTFG+RVK+W TFNEPR+VA LGYD G P RC+
Sbjct: 142 LEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCT 201
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
K GNSATEPYIVAHN +LSHAAAV G++GI+LDF WYE L+ S
Sbjct: 202 KC---AAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALSNS 258
Query: 181 KADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGIN 240
D AAQRARDFH+GW++ P++ G YP+ MQ++V +RLPKFT E+ ++VKGS D++GIN
Sbjct: 259 TEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGIN 318
Query: 241 QYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYI 300
QYTA YM L Q Y DW + + KNG PIGP+ANS WLY VPWGMY + YI
Sbjct: 319 QYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGCVNYI 378
Query: 301 KGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANVVGYFAW 360
K YGNPTV+++ NGMD P N++ + L DTTR+++Y+ YLTQLKKA+D+GANV GYFAW
Sbjct: 379 KQKYGNPTVVITANGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANVAGYFAW 438
Query: 361 SLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLK 402
SLLDNFEW GYTS+FGIVYVDF L+R+PK SAYWF+ +LK
Sbjct: 439 SLLDNFEWLSGYTSKFGIVYVDFNTLERHPKASAYWFRDMLK 480
>pdb|3SCN|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCN|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCO|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCO|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCT|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCT|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCU|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
pdb|3SCU|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
Length = 481
Score = 535 bits (1379), Expect = e-152, Method: Compositional matrix adjust.
Identities = 252/402 (62%), Positives = 305/402 (75%), Gaps = 3/402 (0%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
M +LNFDAYRFSISWSRIFP G G+VN +GVAYYN LINYLL++GITPY NLYHYDLP A
Sbjct: 82 MKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLA 141
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
LEKKY G L+ ++ F +YADFCFKTFG+RVK+W TFNEPR+VA LGYD G P RC+
Sbjct: 142 LEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCT 201
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
K GNSATEPYIVAHN +LSHAAAV G++GI+LDF WYE L+ S
Sbjct: 202 KC---AAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALSNS 258
Query: 181 KADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGIN 240
D AAQRARDFH+GW++ P++ G YP+ MQ++V +RLPKFT E+ ++VKGS D++GIN
Sbjct: 259 TEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGIN 318
Query: 241 QYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYI 300
QYTA YM L Q Y DW + + KNG PIGP+ANS WLY VPWGMY + YI
Sbjct: 319 QYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGCVNYI 378
Query: 301 KGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANVVGYFAW 360
K YGNPTV+++ NGMD P N++ + L DTTR+++Y+ YLTQLKKA+D+GANV GYFAW
Sbjct: 379 KQKYGNPTVVITGNGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANVAGYFAW 438
Query: 361 SLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLK 402
SLLDNFEW GYTS+FGIVYVDF L+R+PK SAYWF+ +LK
Sbjct: 439 SLLDNFEWLSGYTSKFGIVYVDFNTLERHPKASAYWFRDMLK 480
>pdb|3SCV|A Chain A, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCV|B Chain B, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 535 bits (1377), Expect = e-152, Method: Compositional matrix adjust.
Identities = 252/402 (62%), Positives = 305/402 (75%), Gaps = 3/402 (0%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
M +LNFDAYRFSISWSRIFP G G+VN +GVAYYN LINYLL++GITPY NLYHYDLP A
Sbjct: 82 MKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLA 141
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
LEKKY G L+ ++ F +YADFCFKTFG+RVK+W TFNEPR+VA LGYD G P RC+
Sbjct: 142 LEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCT 201
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
K GNSATEPYIVAHN +LSHAAAV G++GI+LDF WYE L+ S
Sbjct: 202 KC---AAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALSNS 258
Query: 181 KADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGIN 240
D AAQRARDFH+GW++ P++ G YP+ MQ++V +RLPKFT E+ ++VKGS D++GIN
Sbjct: 259 TEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGIN 318
Query: 241 QYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYI 300
QYTA YM L Q Y DW + + KNG PIGP+ANS WLY VPWGMY + YI
Sbjct: 319 QYTASYMKGQQLMQQTPTSYAADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGCVNYI 378
Query: 301 KGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANVVGYFAW 360
K YGNPTV+++ NGMD P N++ + L DTTR+++Y+ YLTQLKKA+D+GANV GYFAW
Sbjct: 379 KQKYGNPTVVITGNGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANVAGYFAW 438
Query: 361 SLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLK 402
SLLDNFEW GYTS+FGIVYVDF L+R+PK SAYWF+ +LK
Sbjct: 439 SLLDNFEWLSGYTSKFGIVYVDFNTLERHPKASAYWFRDMLK 480
>pdb|3SCW|A Chain A, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCW|B Chain B, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 534 bits (1375), Expect = e-152, Method: Compositional matrix adjust.
Identities = 252/402 (62%), Positives = 304/402 (75%), Gaps = 3/402 (0%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
M +LNFDAYRFSISWSRIFP G G+VN +GVAYYN LINYLL++GITPY NLYHYDLP A
Sbjct: 82 MKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLA 141
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
LEKKY G L+ ++ F +YADFCFKTFG+RVK+W TFNEPR+VA LGYD G P RC+
Sbjct: 142 LEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCT 201
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
K GNSATEPYIVAHN +LSHAAAV G++GI+LDF WYE L+ S
Sbjct: 202 KC---AAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALSNS 258
Query: 181 KADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGIN 240
D AAQRARDFH+GW++ P++ G YP+ MQ++V +RLPKFT E+ ++VKGS D++GIN
Sbjct: 259 TEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGIN 318
Query: 241 QYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYI 300
QYTA YM L Q Y DW + KNG PIGP+ANS WLY VPWGMY + YI
Sbjct: 319 QYTASYMKGQQLMQQTPTSYSADWQVTAVFAKNGKPIGPQANSNWLYIVPWGMYGCVNYI 378
Query: 301 KGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANVVGYFAW 360
K YGNPTV+++ NGMD P N++ + L DTTR+++Y+ YLTQLKKA+D+GANV GYFAW
Sbjct: 379 KQKYGNPTVVITGNGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANVAGYFAW 438
Query: 361 SLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLK 402
SLLDNFEW GYTS+FGIVYVDF L+R+PK SAYWF+ +LK
Sbjct: 439 SLLDNFEWLSGYTSKFGIVYVDFNTLERHPKASAYWFRDMLK 480
>pdb|3PTK|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTK|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTM|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTM|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTQ|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
pdb|3PTQ|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
Length = 505
Score = 427 bits (1097), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/407 (52%), Positives = 273/407 (67%), Gaps = 6/407 (1%)
Query: 1 MANLNFDAYRFSISWSRIFPYGT--GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLP 58
M ++ DAYRFSISW+RI P G+ G VN +G+ YYN LIN LL +G+ P+ L+H+D P
Sbjct: 97 MKDMGMDAYRFSISWTRILPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFITLFHWDSP 156
Query: 59 EALEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGR 118
+ALE KYNG LS ++ DF DYA+ CFK FGDRVKNW+TFNEP + GY G FAPGR
Sbjct: 157 QALEDKYNGFLSPNIINDFKDYAEICFKEFGDRVKNWITFNEPWTFCSNGYATGLFAPGR 216
Query: 119 CSK-AFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPL 177
CS GNC+VG+S EPY H+ +L+HA V G+IGI L W+ P
Sbjct: 217 CSPWEKGNCSVGDSGREPYTACHHQLLAHAETVRLYKAKYQALQKGKIGITLVSHWFVPF 276
Query: 178 TRSKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFV 237
+RSK++N AA+RA DF GWF+ P++ G+YP +M+ +VGNRLP+FTKE+ K+VKG+ DF+
Sbjct: 277 SRSKSNNDAAKRAIDFMFGWFMDPLIRGDYPLSMRGLVGNRLPQFTKEQSKLVKGAFDFI 336
Query: 238 GINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKAL 297
G+N YTA Y + Y D A +NG+PIGP+A S WLY P G L
Sbjct: 337 GLNYYTANYADNLPPSNGLNNSYTTDSRANLTGVRNGIPIGPQAASPWLYVYPQGFRDLL 396
Query: 298 MYIKGHYGNPTVILSENGMDDPGNVTLP--KGLHDTTRINYYKGYLTQLKKAVDDGANVV 355
+Y+K +YGNPTV ++ENG+D+ N TLP + L D RI YY +L L A+ DGANV
Sbjct: 397 LYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHKHLLSLLSAIRDGANVK 456
Query: 356 GYFAWSLLDNFEWRLGYTSRFGIVYVDFTN-LKRYPKMSAYWFKQLL 401
GYFAWSLLDNFEW GYT RFGI +VD+ + KRYPK SA+WFK+ L
Sbjct: 457 GYFAWSLLDNFEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFKKFL 503
>pdb|3GNO|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase
pdb|3GNP|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-Glucosidase With
Octyl-Beta- D-Thio-Glucoside
pdb|3GNR|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase With
Covalently Bound 2-deoxy-2-fluoroglucoside To The
Catalytic Nucleophile E396
Length = 488
Score = 420 bits (1080), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/409 (51%), Positives = 272/409 (66%), Gaps = 7/409 (1%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
MA++ DAYRFSI+WSRI+P G G+VN G+ +YN+LI+ LL +GI PY LYH+DLP+A
Sbjct: 79 MADMGMDAYRFSIAWSRIYPNGVGQVNQAGIDHYNKLIDALLAKGIQPYVTLYHWDLPQA 138
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
LE KY G L +++V DFA YA+ CF+ FGDRVK+W+T NEP VA GYD G APGRCS
Sbjct: 139 LEDKYKGWLDRQIVDDFAAYAETCFREFGDRVKHWITLNEPHTVAIQGYDAGLQAPGRCS 198
Query: 121 KAFG-NCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTR 179
C GNS TEPY+VAH+ IL+HAAA G++GI D +W+EP++
Sbjct: 199 VLLHLYCKAGNSGTEPYVVAHHFILAHAAAASIYRTKYKATQNGQLGIAFDVMWFEPMSN 258
Query: 180 SKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGI 239
+ D AA+RA++F +GWF P +G+YP TM+ VG RLP+FT +E +VKG++DFVGI
Sbjct: 259 TTIDIEAAKRAQEFQLGWFADPFFFGDYPATMRARVGERLPRFTADEAAVVKGALDFVGI 318
Query: 240 NQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYE--KNGVPIGPRANSYWLYNVPWGMYKAL 297
N YT YY + + + G KNG PIG RANS WLY VP GM +
Sbjct: 319 NHYTTYYTRHNNTNIIGTLLNNTLADTGTVSLPFKNGKPIGDRANSIWLYIVPRGMRSLM 378
Query: 298 MYIKGHYGNPTVILSENGMDDPGN--VTLPKGLHDTTRINYYKGYLTQLKKAV-DDGANV 354
Y+K Y +P V ++ENGMDD N +++ L D+ RI Y+ YLT L ++ +DG +V
Sbjct: 379 NYVKERYNSPPVYITENGMDDSNNPFISIKDALKDSKRIKYHNDYLTNLAASIKEDGCDV 438
Query: 355 VGYFAWSLLDNFEWRLGYTSRFGIVYVDF-TNLKRYPKMSAYWFKQLLK 402
GYFAWSLLDN+EW GY+SRFG+ +VD+ NLKRYPK S WFK LLK
Sbjct: 439 RGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWFKALLK 487
>pdb|1CBG|A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase
From White Clover (Trifolium Repens L.), A Family 1
Glycosyl-Hydrolase
Length = 490
Score = 380 bits (977), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/410 (49%), Positives = 264/410 (64%), Gaps = 8/410 (1%)
Query: 1 MANLNFDAYRFSISWSRIFPYG--TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLP 58
M ++N DAYRFSISW R+ P G +G VN +G+ YYN LIN +L G+ PY L+H+D+P
Sbjct: 82 MKDMNLDAYRFSISWPRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFHWDVP 141
Query: 59 EALEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGR 118
+ALE +Y G L + +V DF DYA+ CFK FGDRVK+W+T NEP V+ Y G FAPGR
Sbjct: 142 QALEDEYRGFLGRNIVDDFRDYAELCFKEFGDRVKHWITLNEPWGVSMNAYAYGTFAPGR 201
Query: 119 CSKAFG-NCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPL 177
CS NCT G+S EPY+ AH +L+HAAA G IGI L W+EP
Sbjct: 202 CSDWLKLNCTGGDSGREPYLAAHYQLLAHAAAARLYKTKYQASQNGIIGITLVSHWFEPA 261
Query: 178 TRSKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFV 237
++ KAD AA+R DF +GWF+HP+ G YP++M+ +V RLPKF+ EE K + GS DF+
Sbjct: 262 SKEKADVDAAKRGLDFMLGWFMHPLTKGRYPESMRYLVRKRLPKFSTEESKELTGSFDFL 321
Query: 238 GINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKAL 297
G+N Y++YY + Q D +E NG P+GP A S WL P G+ K L
Sbjct: 322 GLNYYSSYYAAKAPRIPNARPAIQTDSLINATFEHNGKPLGPMAASSWLCIYPQGIRKLL 381
Query: 298 MYIKGHYGNPTVILSENG---MDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANV 354
+Y+K HY NP + ++ENG +DP ++L + L DT RI+YY +L + A+ DG NV
Sbjct: 382 LYVKNHYNNPVIYITENGRNEFNDP-TLSLQESLLDTPRIDYYYRHLYYVLTAIGDGVNV 440
Query: 355 VGYFAWSLLDNFEWRLGYTSRFGIVYVDF-TNLKRYPKMSAYWFKQLLKR 403
GYFAWSL DN EW GYT RFG+V+VDF NLKR+PK+SA+WFK LK+
Sbjct: 441 KGYFAWSLFDNMEWDSGYTVRFGLVFVDFKNNLKRHPKLSAHWFKSFLKK 490
>pdb|2JF6|A Chain A, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF6|B Chain B, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF7|A Chain A, Structure Of Strictosidine Glucosidase
pdb|2JF7|B Chain B, Structure Of Strictosidine Glucosidase
Length = 532
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/405 (43%), Positives = 251/405 (61%), Gaps = 8/405 (1%)
Query: 1 MANLNFDAYRFSISWSRIFPYG--TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLP 58
M ++YRFSISWSR+ P G VN GV +Y+ I+ LL GI P L+H+DLP
Sbjct: 106 MKQTGLESYRFSISWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTLFHWDLP 165
Query: 59 EALEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGR 118
+ALE +Y G LS R+V DF +YA+FCF FGD++K W TFNEP A GY G FAPGR
Sbjct: 166 QALEDEYGGFLSHRIVDDFCEYAEFCFWEFGDKIKYWTTFNEPHTFAVNGYALGEFAPGR 225
Query: 119 CSKAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLT 178
K G+ A EPY+V HN++L+H AAV G IGI+L+ +W EPL+
Sbjct: 226 GGKG----DEGDPAIEPYVVTHNILLAHKAAVEEYRNKFQKCQEGEIGIVLNSMWMEPLS 281
Query: 179 RSKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVG 238
+AD A +RA DF +GWF+ P+ G+YPK+M+ +V RLPKF+ ++ + +KG DF+G
Sbjct: 282 DVQADIDAQKRALDFMLGWFLEPLTTGDYPKSMRELVKGRLPKFSADDSEKLKGCYDFIG 341
Query: 239 INQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALM 298
+N YTA Y+ + +++ Y+ D +E+N PIG W + VPWG+YK L+
Sbjct: 342 MNYYTATYVTNAVKSNSEKLSYETDDQVTKTFERNQKPIGHALYGGWQHVVPWGLYKLLV 401
Query: 299 YIKGHYGNPTVILSENGM--DDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANVVG 356
Y K Y P + ++E+GM ++ + L + D R +Y++ +L ++ A+DDG NV G
Sbjct: 402 YTKETYHVPVLYVTESGMVEENKTKILLSEARRDAERTDYHQKHLASVRDAIDDGVNVKG 461
Query: 357 YFAWSLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLL 401
YF WS DNFEW LGY R+GI++VD+ + +RYPK SA W+K +
Sbjct: 462 YFVWSFFDNFEWNLGYICRYGIIHVDYKSFERYPKESAIWYKNFI 506
>pdb|4A3Y|A Chain A, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
pdb|4A3Y|B Chain B, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
Length = 540
Score = 356 bits (914), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 197/430 (45%), Positives = 262/430 (60%), Gaps = 26/430 (6%)
Query: 1 MANLNFDAYRFSISWSRIFPYG--TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLP 58
+ NL DAYRFSISWSR+ P G +G VN +G+ YYN LI+ LL GI P+ L+H+D+P
Sbjct: 85 LKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVP 144
Query: 59 EALEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPG- 117
+ALE +Y G LS R+V DF +YA+ CF FGDRVK+WMT NEP + GY G +APG
Sbjct: 145 QALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNEPWTFSVHGYATGLYAPGR 204
Query: 118 ---------------RCSKAFGN--CTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXX 160
RCS C+ GN TEPY V H+L+L+HAAAV
Sbjct: 205 GRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAAVELYKNKFQRG 264
Query: 161 XXGRIGILLDFVWYEPLTR-SKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRL 219
G+IGI W EP S +D AA RA DF +GWF+ PI G+YPK+M+ VG+RL
Sbjct: 265 QEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITSGDYPKSMKKFVGSRL 324
Query: 220 PKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQ--PKQVGYQQDWNAGFAYEKNGVPI 277
PKF+ E+ KM+KGS DFVG+N YTA Y+ + Y D + + ++NGVPI
Sbjct: 325 PKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHVTYETDRNGVPI 384
Query: 278 GPRANSYWLYNVPWGMYKALMYIKGHYGNPTVILSENGMDD--PGNVTLPKGLHDTTRIN 335
GP++ S WL P G+ K L+Y K Y P + ++ENG+DD N+TL + D+ R+
Sbjct: 385 GPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLTLSEARKDSMRLK 444
Query: 336 YYKGYLTQLKKAVDDGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFT-NLKRYPKMSA 394
Y + ++ +++A++DG NV GYFAWSLLDNFEW GY RFGI+++D+ N RYPK SA
Sbjct: 445 YLQDHIFNVRQAMNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYNDNFARYPKDSA 504
Query: 395 YWFKQLLKRN 404
W +N
Sbjct: 505 VWLMNSFHKN 514
>pdb|4ATD|A Chain A, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATD|B Chain B, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATL|A Chain A, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
pdb|4ATL|B Chain B, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
Length = 513
Score = 353 bits (907), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 196/423 (46%), Positives = 260/423 (61%), Gaps = 26/423 (6%)
Query: 1 MANLNFDAYRFSISWSRIFPYG--TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLP 58
+ NL DAYRFSISWSR+ P G +G VN +G+ YYN LI+ LL GI P+ L+H+D+P
Sbjct: 85 LKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVP 144
Query: 59 EALEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPG- 117
+ALE +Y G LS R+V DF +YA+ CF FGDRVK+WMT NEP + GY G +APG
Sbjct: 145 QALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNEPWTFSVHGYATGLYAPGR 204
Query: 118 ---------------RCSKAFGN--CTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXX 160
RCS C+ GN TEPY V H+L+L+HAAAV
Sbjct: 205 GRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAAVELYKNKFQRG 264
Query: 161 XXGRIGILLDFVWYEPLTR-SKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRL 219
G+IGI W EP S +D AA RA DF +GWF+ PI G+YPK+M+ VG+RL
Sbjct: 265 QEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITSGDYPKSMKKFVGSRL 324
Query: 220 PKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQ--PKQVGYQQDWNAGFAYEKNGVPI 277
PKF+ E+ KM+KGS DFVG+N YTA Y+ + Y D + + ++NGVPI
Sbjct: 325 PKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHVTYETDRNGVPI 384
Query: 278 GPRANSYWLYNVPWGMYKALMYIKGHYGNPTVILSENGMDD--PGNVTLPKGLHDTTRIN 335
GP++ S WL P G+ K L+Y K Y P + ++ENG+DD N+TL + D+ R+
Sbjct: 385 GPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLTLSEARKDSMRLK 444
Query: 336 YYKGYLTQLKKAVDDGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFT-NLKRYPKMSA 394
Y + ++ +++A++DG NV GYFAWSLLDNFEW GY RFGI+++D+ N RYPK SA
Sbjct: 445 YLQDHIFNVRQAMNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYNDNFARYPKDSA 504
Query: 395 YWF 397
W
Sbjct: 505 VWL 507
>pdb|2DGA|A Chain A, Crystal Structure Of Hexameric Beta-Glucosidase In Wheat
pdb|3AIQ|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With An Aglycone Dimboa
pdb|3AIR|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With 2-Deoxy- 2-Fluoroglucoside And Dinitrophenol
Length = 565
Score = 353 bits (905), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 173/408 (42%), Positives = 253/408 (62%), Gaps = 11/408 (2%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
+ ++ YRFSISWSRI P GTGKVN G+ YYN+LIN L+ I PY ++H+D P+A
Sbjct: 137 LKDMGMKVYRFSISWSRILPDGTGKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWDTPQA 196
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
LE KY G L++++V D+ +A+ CFK FGDRVKNW TFNEP Y G APGRCS
Sbjct: 197 LEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKNWFTFNEPHTYCCFSYGEGIHAPGRCS 256
Query: 121 KAFGNCTV--GNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLT 178
+C V G+S EPY H+++L+HA AV +IG+ D + YEP
Sbjct: 257 PGM-DCAVPEGDSLREPYTAGHHILLAHAEAVQLFKARYNMHGDSKIGMAFDVMGYEPYQ 315
Query: 179 RSKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVG 238
S D+ A +R+ D+++GWF+ P+V G+YP +M++++G+RLP FTKEE + + S D +G
Sbjct: 316 DSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPMFTKEEQEKLASSCDIMG 375
Query: 239 INQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEK----NGVPIGPRANSYWLYNVPWGMY 294
+N YT+ + H+ + + +A + +G IGP +YW+Y P G+
Sbjct: 376 LNYYTS--RFSKHVDMSPDFTPTLNTDDAYASSETTGSDGNDIGPITGTYWIYMYPKGLT 433
Query: 295 KALMYIKGHYGNPTVILSENGMDD-PGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGAN 353
L+ +K YGNP V ++ENG+ D G+ ++P L D R++Y + +++ +K A+D GA+
Sbjct: 434 DLLLIMKEKYGNPPVFITENGIADVEGDESMPDPLDDWKRLDYLQRHISAVKDAIDQGAD 493
Query: 354 VVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTN-LKRYPKMSAYWFKQL 400
V G+F W L+DNFEW LGY+SRFG+VY+D + KR K SA WF +
Sbjct: 494 VRGHFTWGLIDNFEWSLGYSSRFGLVYIDKNDGNKRKLKKSAKWFSKF 541
>pdb|3U57|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U57|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|4EK7|A Chain A, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
pdb|4EK7|B Chain B, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
Length = 513
Score = 352 bits (904), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 195/423 (46%), Positives = 260/423 (61%), Gaps = 26/423 (6%)
Query: 1 MANLNFDAYRFSISWSRIFPYG--TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLP 58
+ NL DAYRFSISWSR+ P G +G VN +G+ YYN LI+ LL GI P+ L+H+D+P
Sbjct: 85 LKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVP 144
Query: 59 EALEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPG- 117
+ALE +Y G LS R+V DF +YA+ CF FGDRVK+WMT N+P + GY G +APG
Sbjct: 145 QALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNQPWTFSVHGYATGLYAPGR 204
Query: 118 ---------------RCSKAFGN--CTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXX 160
RCS C+ GN TEPY V H+L+L+HAAAV
Sbjct: 205 GRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAAVELYKNKFQRG 264
Query: 161 XXGRIGILLDFVWYEPLTR-SKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRL 219
G+IGI W EP S +D AA RA DF +GWF+ PI G+YPK+M+ VG+RL
Sbjct: 265 QEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITSGDYPKSMKKFVGSRL 324
Query: 220 PKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQ--PKQVGYQQDWNAGFAYEKNGVPI 277
PKF+ E+ KM+KGS DFVG+N YTA Y+ + Y D + + ++NGVPI
Sbjct: 325 PKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHVTYETDRNGVPI 384
Query: 278 GPRANSYWLYNVPWGMYKALMYIKGHYGNPTVILSENGMDD--PGNVTLPKGLHDTTRIN 335
GP++ S WL P G+ K L+Y K Y P + ++ENG+DD N+TL + D+ R+
Sbjct: 385 GPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLTLSEARKDSMRLK 444
Query: 336 YYKGYLTQLKKAVDDGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFT-NLKRYPKMSA 394
Y + ++ +++A++DG NV GYFAWSLLDNFEW GY RFGI+++D+ N RYPK SA
Sbjct: 445 YLQDHIFNVRQAMNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYNDNFARYPKDSA 504
Query: 395 YWF 397
W
Sbjct: 505 VWL 507
>pdb|3AIS|A Chain A, Crystal Structure Of A Mutant Beta-Glucosidase In Wheat
Complexed With Dimboa-Glc
Length = 565
Score = 350 bits (899), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 172/408 (42%), Positives = 252/408 (61%), Gaps = 11/408 (2%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
+ ++ YRFSISWSRI P GTGKVN G+ YYN+LIN L+ I PY ++H+D P+A
Sbjct: 137 LKDMGMKVYRFSISWSRILPDGTGKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWDTPQA 196
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
LE KY G L++++V D+ +A+ CFK FGDRVKNW TFN P Y G APGRCS
Sbjct: 197 LEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKNWFTFNAPHTYCCFSYGEGIHAPGRCS 256
Query: 121 KAFGNCTV--GNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLT 178
+C V G+S EPY H+++L+HA AV +IG+ D + YEP
Sbjct: 257 PGM-DCAVPEGDSLREPYTAGHHILLAHAEAVQLFKARYNMHGDSKIGMAFDVMGYEPYQ 315
Query: 179 RSKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVG 238
S D+ A +R+ D+++GWF+ P+V G+YP +M++++G+RLP FTKEE + + S D +G
Sbjct: 316 DSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPMFTKEEQEKLASSCDIMG 375
Query: 239 INQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEK----NGVPIGPRANSYWLYNVPWGMY 294
+N YT+ + H+ + + +A + +G IGP +YW+Y P G+
Sbjct: 376 LNYYTS--RFSKHVDMSPDFTPTLNTDDAYASSETTGSDGNDIGPITGTYWIYMYPKGLT 433
Query: 295 KALMYIKGHYGNPTVILSENGMDD-PGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGAN 353
L+ +K YGNP V ++ENG+ D G+ ++P L D R++Y + +++ +K A+D GA+
Sbjct: 434 DLLLIMKEKYGNPPVFITENGIADVEGDESMPDPLDDWKRLDYLQRHISAVKDAIDQGAD 493
Query: 354 VVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTN-LKRYPKMSAYWFKQL 400
V G+F W L+DNFEW LGY+SRFG+VY+D + KR K SA WF +
Sbjct: 494 VRGHFTWGLIDNFEWSLGYSSRFGLVYIDKNDGNKRKLKKSAKWFSKF 541
>pdb|3AIU|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye
pdb|3AIV|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With An Aglycone Dimboa
pdb|3AIW|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With 2-Deoxy-2- Fluoroglucoside And Dinitrophenol
Length = 564
Score = 350 bits (898), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 176/414 (42%), Positives = 252/414 (60%), Gaps = 23/414 (5%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
+ ++ YRFSISWSRI P GTGK N KG+ YYN LIN L++ GI PY ++H+D P+A
Sbjct: 137 LKDMGMKVYRFSISWSRILPNGTGKPNQKGIDYYNNLINSLIRHGIVPYVTIWHWDTPQA 196
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
LE KY G L K++V D+ +A+ CF++FGDRVKNW TFNEP Y G APGRCS
Sbjct: 197 LEDKYGGFLDKQIVNDYKYFAELCFQSFGDRVKNWFTFNEPHTYCCFSYGEGIHAPGRCS 256
Query: 121 KAFGNCTV--GNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLT 178
+C V G+S EPY H+++L+HA AV +IG+ D + YEP
Sbjct: 257 PGL-DCAVPEGDSLREPYTAGHHILLAHAEAVELFKAHYNKHGDSKIGMAFDVMGYEPYQ 315
Query: 179 RSKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVG 238
S D+ A +R+ D+++GWF+ P+V G+YP +M++++G+RLP FTKEE + + S D +G
Sbjct: 316 DSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPMFTKEEQEKLASSCDIMG 375
Query: 239 INQYTAYYMYDPHLKQPKQVGYQQDW----NAGFAYE------KNGVPIGPRANSYWLYN 288
+N YT+ + K V D+ N AY +G IGP +YW+Y
Sbjct: 376 LNYYTSRFS--------KHVDISSDYTPTLNTDDAYASSETTGSDGNEIGPITGTYWIYM 427
Query: 289 VPWGMYKALMYIKGHYGNPTVILSENGMDD-PGNVTLPKGLHDTTRINYYKGYLTQLKKA 347
P G+ L+ +K YGNP + ++ENG+ D G+ +P L D R++Y + +++ +K A
Sbjct: 428 YPKGLTDLLLIMKEKYGNPPIFITENGIADVEGDPEMPDPLDDWKRLDYLQRHISAVKDA 487
Query: 348 VDDGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTNL-KRYPKMSAYWFKQL 400
+D GA+V G+F W L+DNFEW GY+SRFG+VY+D + KR K SA WF +
Sbjct: 488 IDQGADVRGHFTWGLIDNFEWGSGYSSRFGLVYIDKEDGNKRKLKKSAKWFAKF 541
>pdb|1V03|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 335 bits (859), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 177/411 (43%), Positives = 251/411 (61%), Gaps = 15/411 (3%)
Query: 1 MANLNFDAYRFSISWSRIFPYGT--GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLP 58
+ + DAYRFSISW RI P GT G +N KGV YYN+LI+ LL+ GI PY ++H+D P
Sbjct: 139 LKEMGMDAYRFSISWPRILPKGTLAGGINEKGVEYYNKLIDLLLENGIEPYITIFHWDTP 198
Query: 59 EALEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGR 118
+AL + Y G L +R++KD+ D+A CF+ FG VKNW+TFN+P ++ Y G APGR
Sbjct: 199 QALVEAYGGFLDERIIKDYTDFAKVCFEKFGKTVKNWLTFNDPETFCSVSYGTGVLAPGR 258
Query: 119 CSKAFGNCTV--GNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEP 176
CS +C V GNS +EPYIVAHNL+ +HA V GRIG+ L+ P
Sbjct: 259 CSPGV-SCAVPTGNSLSEPYIVAHNLLRAHAETV-DIYNKYHKGADGRIGLALNVFGRVP 316
Query: 177 LTRSKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDF 236
T + D A +R+ D +GWF+ P+V G+YP +M+ +R+P F ++E + + GS D
Sbjct: 317 YTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYFKEKEQEKLVGSYDM 376
Query: 237 VGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEK----NGVPIGPRANSYWLYNVPWG 292
+GIN YT+ + H+ + + +A ++ +G IGP + W+ P G
Sbjct: 377 IGINYYTS--TFSKHIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPPTGNAWINMYPKG 434
Query: 293 MYKALMYIKGHYGNPTVILSENGMD--DPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDD 350
++ LM +K YGNP + ++ENGM D G++ P L D TR++Y + +L+ LK+++D
Sbjct: 435 LHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQRHLSVLKQSIDL 494
Query: 351 GANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTN-LKRYPKMSAYWFKQL 400
GA+V GYFAWSLLDNFEW GYT RFGIVYVD N +R K SA W ++
Sbjct: 495 GADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENGCERTMKRSARWLQEF 545
>pdb|1V02|E Chain E, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 334 bits (857), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 177/411 (43%), Positives = 250/411 (60%), Gaps = 15/411 (3%)
Query: 1 MANLNFDAYRFSISWSRIFPYGT--GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLP 58
+ + DAYRFSISW RI P GT G +N K V YYN+LI+ LL+ GI PY ++H+D P
Sbjct: 139 LKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHWDTP 198
Query: 59 EALEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGR 118
+AL Y G L +R++KD+ D+A CF+ FG +VKNW+TFNEP ++ Y G APGR
Sbjct: 199 QALVDAYGGFLDERIIKDYTDFAKVCFEKFGKKVKNWLTFNEPETFCSVSYGTGVLAPGR 258
Query: 119 CSKAFGNCTV--GNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEP 176
CS +C V GNS +EPYIVAHNL+ +HA V GRIG+ L+ P
Sbjct: 259 CSPGV-SCAVPTGNSLSEPYIVAHNLLRAHAETV-DIYNKYHKGADGRIGLALNVFGRVP 316
Query: 177 LTRSKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDF 236
T + D A +R+ D +GWF+ P+V G+YP +M+ +R+P F ++E + + GS D
Sbjct: 317 YTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYFKEKEQEKLVGSYDM 376
Query: 237 VGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEK----NGVPIGPRANSYWLYNVPWG 292
+GIN YT+ + H+ + + +A ++ +G IGP + W+ P G
Sbjct: 377 IGINYYTS--TFSKHIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPPTGNAWINMYPKG 434
Query: 293 MYKALMYIKGHYGNPTVILSENGMD--DPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDD 350
++ LM +K YGNP + ++ENGM D G++ P L D TR++Y + +L+ LK+++D
Sbjct: 435 LHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQRHLSVLKQSIDL 494
Query: 351 GANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTN-LKRYPKMSAYWFKQL 400
GA+V GYFAWSLLDNFEW GYT RFGIVYVD N +R K SA W ++
Sbjct: 495 GADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENGCERTMKRSARWLQEF 545
>pdb|1V02|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|B Chain B, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|C Chain C, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|D Chain D, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|F Chain F, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 333 bits (853), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 177/411 (43%), Positives = 249/411 (60%), Gaps = 15/411 (3%)
Query: 1 MANLNFDAYRFSISWSRIFPYGT--GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLP 58
+ + DAYRFSISW RI P GT G +N K V YYN+LI+ LL+ GI PY ++H+D P
Sbjct: 139 LKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHWDTP 198
Query: 59 EALEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGR 118
+AL Y G L +R++KD+ D+A CF+ FG VKNW+TFNEP ++ Y G APGR
Sbjct: 199 QALVDAYGGFLDERIIKDYTDFAKVCFEKFGKTVKNWLTFNEPETFCSVSYGTGVLAPGR 258
Query: 119 CSKAFGNCTV--GNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEP 176
CS +C V GNS +EPYIVAHNL+ +HA V GRIG+ L+ P
Sbjct: 259 CSPGV-SCAVPTGNSLSEPYIVAHNLLRAHAETV-DIYNKYHKGADGRIGLALNVFGRVP 316
Query: 177 LTRSKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDF 236
T + D A +R+ D +GWF+ P+V G+YP +M+ +R+P F ++E + + GS D
Sbjct: 317 YTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYFKEKEQEKLVGSYDM 376
Query: 237 VGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEK----NGVPIGPRANSYWLYNVPWG 292
+GIN YT+ + H+ + + +A ++ +G IGP + W+ P G
Sbjct: 377 IGINYYTS--TFSKHIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPPTGNAWINMYPKG 434
Query: 293 MYKALMYIKGHYGNPTVILSENGMD--DPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDD 350
++ LM +K YGNP + ++ENGM D G++ P L D TR++Y + +L+ LK+++D
Sbjct: 435 LHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQRHLSVLKQSIDL 494
Query: 351 GANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTN-LKRYPKMSAYWFKQL 400
GA+V GYFAWSLLDNFEW GYT RFGIVYVD N +R K SA W ++
Sbjct: 495 GADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENGCERTMKRSARWLQEF 545
>pdb|1HXJ|A Chain A, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
pdb|1HXJ|B Chain B, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
Length = 507
Score = 322 bits (826), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/420 (41%), Positives = 241/420 (57%), Gaps = 28/420 (6%)
Query: 1 MANLNFDAYRFSISWSRIFPYGT--GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLP 58
+ + DAYRFSISW RI P GT G +N G+ YY LIN LL+ GI PY ++H+D+P
Sbjct: 82 LKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVP 141
Query: 59 EALEKKYNGLLSKR---VVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFA 115
+ALE+KY G L K +V+D+ +A CF FGD+VKNW+TFNEP+ + Y G FA
Sbjct: 142 QALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNEPQTFTSFSYGTGVFA 201
Query: 116 PGRCSKAFGNCT--VGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVW 173
PGRCS +C GNS EPY HN++L+HA AV RIG+ D +
Sbjct: 202 PGRCSPGL-DCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDT-RIGLAFDVMG 259
Query: 174 YEPLTRSKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGS 233
P S D A +R+ D ++GWF+ P+V G+YP +M+++ RLP F E+ + + GS
Sbjct: 260 RVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARERLPFFKDEQKEKLAGS 319
Query: 234 IDFVGINQYTAYYM--------YDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYW 285
+ +G+N YT+ + Y P L Q+ +G PIGP + W
Sbjct: 320 YNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQE------VNGPDGKPIGPPMGNPW 373
Query: 286 LYNVPWGMYKALMYIKGHYGNPTVILSENGMDDPGNVTLP----KGLHDTTRINYYKGYL 341
+Y P G+ LM +K YGNP + ++ENG+ D P L+D R++Y + ++
Sbjct: 374 IYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYKRLDYIQRHI 433
Query: 342 TQLKKAVDDGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDF-TNLKRYPKMSAYWFKQL 400
LK+++D G+NV GYFAWSLLDNFEW G+T R+GIVYVD N RY K SA W K+
Sbjct: 434 ATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 493
>pdb|1E1E|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1E|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1F|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
pdb|1E1F|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
Length = 512
Score = 322 bits (825), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/420 (41%), Positives = 241/420 (57%), Gaps = 28/420 (6%)
Query: 1 MANLNFDAYRFSISWSRIFPYGT--GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLP 58
+ + DAYRFSISW RI P GT G +N G+ YY LIN LL+ GI PY ++H+D+P
Sbjct: 87 LKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVP 146
Query: 59 EALEKKYNGLLSKR---VVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFA 115
+ALE+KY G L K +V+D+ +A CF FGD+VKNW+TFNEP+ + Y G FA
Sbjct: 147 QALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNEPQTFTSFSYGTGVFA 206
Query: 116 PGRCSKAFGNCT--VGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVW 173
PGRCS +C GNS EPY HN++L+HA AV RIG+ D +
Sbjct: 207 PGRCSPGL-DCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDT-RIGLAFDVMG 264
Query: 174 YEPLTRSKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGS 233
P S D A +R+ D ++GWF+ P+V G+YP +M+++ RLP F E+ + + GS
Sbjct: 265 RVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARERLPFFKDEQKEKLAGS 324
Query: 234 IDFVGINQYTAYYM--------YDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYW 285
+ +G+N YT+ + Y P L Q+ +G PIGP + W
Sbjct: 325 YNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQE------VNGPDGKPIGPPMGNPW 378
Query: 286 LYNVPWGMYKALMYIKGHYGNPTVILSENGMDDPGNVTLP----KGLHDTTRINYYKGYL 341
+Y P G+ LM +K YGNP + ++ENG+ D P L+D R++Y + ++
Sbjct: 379 IYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYKRLDYIQRHI 438
Query: 342 TQLKKAVDDGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDF-TNLKRYPKMSAYWFKQL 400
LK+++D G+NV GYFAWSLLDNFEW G+T R+GIVYVD N RY K SA W K+
Sbjct: 439 ATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 498
>pdb|1H49|A Chain A, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
pdb|1H49|B Chain B, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
Length = 512
Score = 321 bits (822), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 173/420 (41%), Positives = 242/420 (57%), Gaps = 28/420 (6%)
Query: 1 MANLNFDAYRFSISWSRIFPYGT--GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLP 58
+ + DAYRFSISW RI P GT G +N G+ YY LIN LL+ GI PY ++H+D+P
Sbjct: 87 LKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVP 146
Query: 59 EALEKKYNGLLSKR---VVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFA 115
+ALE+KY G L K +V+D+ +A CF FGD+VKNW+TFN+P+ ++ Y G FA
Sbjct: 147 QALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNDPQTFTSVSYGTGVFA 206
Query: 116 PGRCSKAFGNCT--VGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVW 173
PGRCS +C GNS EPY HN++L+HA AV RIG+ D +
Sbjct: 207 PGRCSPGL-DCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDT-RIGLAFDVMG 264
Query: 174 YEPLTRSKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGS 233
P S D A +R+ D ++GWF+ P+V G+YP +M+++ RLP F E+ + + GS
Sbjct: 265 RVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARERLPFFKDEQKEKLAGS 324
Query: 234 IDFVGINQYTAYYM--------YDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYW 285
+ +G+N YT+ + Y P L Q+ +G PIGP + W
Sbjct: 325 YNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQE------VNGPDGKPIGPPMGNPW 378
Query: 286 LYNVPWGMYKALMYIKGHYGNPTVILSENGMDDPGNVTLP----KGLHDTTRINYYKGYL 341
+Y P G+ LM +K YGNP + ++ENG+ D P L+D R++Y + ++
Sbjct: 379 IYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYKRLDYIQRHI 438
Query: 342 TQLKKAVDDGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDF-TNLKRYPKMSAYWFKQL 400
LK+++D G+NV GYFAWSLLDNFEW G+T R+GIVYVD N RY K SA W K+
Sbjct: 439 ATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 498
>pdb|1E4L|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4L|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4N|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E4N|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E55|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E55|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E56|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1E56|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1V08|A Chain A, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
pdb|1V08|B Chain B, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
Length = 512
Score = 320 bits (821), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 173/420 (41%), Positives = 241/420 (57%), Gaps = 28/420 (6%)
Query: 1 MANLNFDAYRFSISWSRIFPYGT--GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLP 58
+ + DAYRFSISW RI P GT G +N G+ YY LIN LL+ GI PY ++H+D+P
Sbjct: 87 LKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVP 146
Query: 59 EALEKKYNGLLSKR---VVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFA 115
+ALE+KY G L K +V+D+ +A CF FGD+VKNW+TFN+P+ + Y G FA
Sbjct: 147 QALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNDPQTFTSFSYGTGVFA 206
Query: 116 PGRCSKAFGNCT--VGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVW 173
PGRCS +C GNS EPY HN++L+HA AV RIG+ D +
Sbjct: 207 PGRCSPGL-DCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDT-RIGLAFDVMG 264
Query: 174 YEPLTRSKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGS 233
P S D A +R+ D ++GWF+ P+V G+YP +M+++ RLP F E+ + + GS
Sbjct: 265 RVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARERLPFFKDEQKEKLAGS 324
Query: 234 IDFVGINQYTAYYM--------YDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYW 285
+ +G+N YT+ + Y P L Q+ +G PIGP + W
Sbjct: 325 YNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQE------VNGPDGKPIGPPMGNPW 378
Query: 286 LYNVPWGMYKALMYIKGHYGNPTVILSENGMDDPGNVTLP----KGLHDTTRINYYKGYL 341
+Y P G+ LM +K YGNP + ++ENG+ D P L+D R++Y + ++
Sbjct: 379 IYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYKRLDYIQRHI 438
Query: 342 TQLKKAVDDGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDF-TNLKRYPKMSAYWFKQL 400
LK+++D G+NV GYFAWSLLDNFEW G+T R+GIVYVD N RY K SA W K+
Sbjct: 439 ATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 498
>pdb|2E3Z|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E3Z|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E40|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
pdb|2E40|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
Length = 465
Score = 310 bits (793), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 177/410 (43%), Positives = 239/410 (58%), Gaps = 36/410 (8%)
Query: 8 AYRFSISWSRIFPYG--TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKY 65
AYRFS+SWSRI P G + VN G+ +Y LI L+K GITP+ LYH+DLP+AL+ +Y
Sbjct: 78 AYRFSLSWSRIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTLYHWDLPQALDDRY 137
Query: 66 NGLLSKR-VVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSKAFG 124
G L+K ++DF +YA CF++FGD V+NW+TFNEP V++ +GY NG FAPG S
Sbjct: 138 GGWLNKEEAIQDFTNYAKLCFESFGDLVQNWITFNEPWVISVMGYGNGIFAPGHVSN--- 194
Query: 125 NCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRSKADN 184
TEP+IV+H++IL+HA AV G+IGI LD W P + A
Sbjct: 195 --------TEPWIVSHHIILAHAHAVKLYRDEFKEKQGGQIGITLDSHWLIPYDDTDASK 246
Query: 185 YAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTA 244
A RA +F +G F +PI GEYP ++ I+G+RLP+FT EE+++VKGS DF G+N YT
Sbjct: 247 EATLRAMEFKLGRFANPIYKGEYPPRIKKILGDRLPEFTPEEIELVKGSSDFFGLNTYTT 306
Query: 245 YYMYDPHLKQPKQVGYQQDWNAGFA----YEKNGVPIGPRANSYWLYNVPWGMYKALMYI 300
+ + D D AGF +G +G +++ WL G L Y+
Sbjct: 307 HLVQDG----------GSDELAGFVKTGHTRADGTQLGTQSDMGWLQTYGPGFRWLLNYL 356
Query: 301 KGHYGNPTVILSENGMDDPGNVTLP--KGLHDTTRINYYKGYLTQLKKAV-DDGANVVGY 357
Y P V ++ENG G LP + + DT R YY+ Y L +AV +DGA+V GY
Sbjct: 357 WKAYDKP-VYVTENGFPVKGENDLPVEQAVDDTDRQAYYRDYTEALLQAVTEDGADVRGY 415
Query: 358 FAWSLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAY----WFKQLLKR 403
F WSLLDNFEW GY RFG+ +VD+ KR PK SA WFK+ ++
Sbjct: 416 FGWSLLDNFEWAEGYKVRFGVTHVDYETQKRTPKKSAEFLSRWFKEHIEE 465
>pdb|4GXP|A Chain A, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|B Chain B, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|C Chain C, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
Length = 467
Score = 308 bits (790), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 173/406 (42%), Positives = 234/406 (57%), Gaps = 19/406 (4%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
+ L AYRFSISW RI P GTG+VN KG+ +YN++I+ LL++GITP+ ++H+DLP A
Sbjct: 75 IEKLGVKAYRFSISWPRILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIFHWDLPFA 134
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
L+ K GLL++ + FA+Y+ F+ FGDRVKNW+TFNEP A GY +G FAPGR
Sbjct: 135 LQLK-GGLLNREIADWFAEYSRVLFENFGDRVKNWITFNEPLCSAIPGYGSGTFAPGR-- 191
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
S +EP+ V HN++++H AV G+IGI+L+ + P +
Sbjct: 192 ---------QSTSEPWTVGHNILVAHGRAV---KVFRETVKDGKIGIVLNGDFTYPWDAA 239
Query: 181 K-ADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGI 239
AD AA+R +F WF PI G+YP +M+ +G+RLP FT EE +V GS DF G+
Sbjct: 240 DPADKEAAERRLEFFTAWFADPIYLGDYPASMRKQLGDRLPTFTPEERALVHGSNDFYGM 299
Query: 240 NQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMY 299
N YT+ Y+ H P K G IGP WL G L++
Sbjct: 300 NHYTSNYIR--HRSSPASADDTVGNVDVLFTNKQGNCIGPETAMPWLRPCAAGFRDFLVW 357
Query: 300 IKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVD-DGANVVGYF 358
I YG P + ++ENG V+ +HD RI+Y K Y+ + AV+ DG NV GYF
Sbjct: 358 ISKRYGYPPIYVTENGAAFDDVVSEDGRVHDQNRIDYLKAYIGAMVTAVELDGVNVKGYF 417
Query: 359 AWSLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLKRN 404
WSLLDNFEW GY+ RFGIVYVD++ KR K S YW+ ++K N
Sbjct: 418 VWSLLDNFEWAEGYSKRFGIVYVDYSTQKRIVKDSGYWYSNVVKNN 463
>pdb|1E6Q|M Chain M, Myrosinase From Sinapis Alba With The Bound Transition
State Analogue Gluco-Tetrazole
pdb|1E6X|M Chain M, Myrosinase From Sinapis Alba With A Bound Transition State
Analogue,D-Glucono-1,5-Lactone
pdb|1E70|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba
pdb|1E71|M Chain M, Myrosinase From Sinapis Alba With Bound Ascorbate
pdb|1E72|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate Or Ascorbate
pdb|1E73|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba With Bound
L-Ascorbate
pdb|1E6S|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate
pdb|1E4M|M Chain M, Myrosinase From Sinapis Alba
pdb|1W9B|M Chain M, S. Alba Myrosinase In Complex With Carba-Glucotropaeolin
pdb|1W9D|M Chain M, S. Alba Myrosinase In Complex With S-Ethyl
Phenylacetothiohydroximate-O-Sulfate
pdb|2WXD|M Chain M, A Micromolar O-Sulfated Thiohydroximate Inhibitor Bound To
Plant Myrosinase
Length = 501
Score = 292 bits (748), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/416 (40%), Positives = 239/416 (57%), Gaps = 15/416 (3%)
Query: 1 MANLNFDAYRFSISWSRIFPYG--TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLP 58
+ LN YRFSI+WSRI P G + VN KG+ YY+ LI+ L+K+GITP+ L+H+DLP
Sbjct: 86 LDELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLP 145
Query: 59 EALEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGR 118
+ L+ +Y G L +++ DF DYAD CF+ FGD VK W+T N+ V GY + APGR
Sbjct: 146 QTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGR 205
Query: 119 CSKAFG-NCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPL 177
CS +C GNS+TEPYIVAH+ +L+HA V G+IG + W+ P
Sbjct: 206 CSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVV-DLYRKNYTHQGGKIGPTMITRWFLPY 264
Query: 178 TRSKADNYAA-QRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDF 236
+ + AA +R ++F +GWF+ P+ G YP+ M + VG RLP F+ EE +VKGS DF
Sbjct: 265 NDTDRHSIAATERMKEFFLGWFMGPLTNGTYPQIMIDTVGERLPSFSPEESNLVKGSYDF 324
Query: 237 VGINQY-TAYYMYDPHLKQPKQVGYQQDWNAGFAY-EKNGVPIGP-----RANSYW-LYN 288
+G+N Y T Y P+ D A Y +G IGP +A+S +Y
Sbjct: 325 LGLNYYFTQYAQPSPNPVNSTNHTAMMDAGAKLTYINASGHYIGPLFEKDKADSTDNIYY 384
Query: 289 VPWGMYKALMYIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAV 348
P G+Y + Y K Y NP + ++ENG+ PG+ + + D TRI+Y +L L K +
Sbjct: 385 YPKGIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQSMLDYTRIDYLCSHLCFLNKVI 444
Query: 349 -DDGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTNL-KRYPKMSAYWFKQLLK 402
+ NV GY AW+L DN+E+ G+T RFG+ Y+D+ N+ R K S W++ +
Sbjct: 445 KEKDVNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNNVTDRDLKKSGQWYQSFIS 500
>pdb|1DWA|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 1:
Structure Prior To Irradiation
pdb|1DWF|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 2:
Structure After Irradiation With 9.110e15 PhotonsMM2
pdb|1DWG|M Chain M, Study On Radiation Damage On A Cryocooled Crystal: Part 3
Structure After Irradiation With 18.210e15 PhotonsMM2.
pdb|1DWH|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 4:
Structure After Irradiation With 27.210e15 PhotonsMM2
pdb|1DWI|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 5:
Structure After Irradiation With 54.010e15 PhotonsMM2
pdb|1DWJ|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Refined
Part 6: Structure After A Radiation Dose Of 5410e15
PhotonsMM2
Length = 499
Score = 292 bits (747), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/416 (40%), Positives = 239/416 (57%), Gaps = 15/416 (3%)
Query: 1 MANLNFDAYRFSISWSRIFPYG--TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLP 58
+ LN YRFSI+WSRI P G + VN KG+ YY+ LI+ L+K+GITP+ L+H+DLP
Sbjct: 84 LDELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLP 143
Query: 59 EALEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGR 118
+ L+ +Y G L +++ DF DYAD CF+ FGD VK W+T N+ V GY + APGR
Sbjct: 144 QTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGR 203
Query: 119 CSKAFG-NCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPL 177
CS +C GNS+TEPYIVAH+ +L+HA V G+IG + W+ P
Sbjct: 204 CSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVV-DLYRKNYTHQGGKIGPTMITRWFLPY 262
Query: 178 TRSKADNYAA-QRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDF 236
+ + AA +R ++F +GWF+ P+ G YP+ M + VG RLP F+ EE +VKGS DF
Sbjct: 263 NDTDRHSIAATERMKEFFLGWFMGPLTNGTYPQIMIDTVGERLPSFSPEESNLVKGSYDF 322
Query: 237 VGINQY-TAYYMYDPHLKQPKQVGYQQDWNAGFAY-EKNGVPIGP-----RANSYW-LYN 288
+G+N Y T Y P+ D A Y +G IGP +A+S +Y
Sbjct: 323 LGLNYYFTQYAQPSPNPVNSTNHTAMMDAGAKLTYINASGHYIGPLFEKDKADSTDNIYY 382
Query: 289 VPWGMYKALMYIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAV 348
P G+Y + Y K Y NP + ++ENG+ PG+ + + D TRI+Y +L L K +
Sbjct: 383 YPKGIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQSMLDYTRIDYLCSHLCFLNKVI 442
Query: 349 -DDGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTNL-KRYPKMSAYWFKQLLK 402
+ NV GY AW+L DN+E+ G+T RFG+ Y+D+ N+ R K S W++ +
Sbjct: 443 KEKDVNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNNVTDRDLKKSGQWYQTFIS 498
>pdb|1MYR|A Chain A, Myrosinase From Sinapis Alba
Length = 501
Score = 289 bits (740), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/416 (39%), Positives = 236/416 (56%), Gaps = 15/416 (3%)
Query: 1 MANLNFDAYRFSISWSRIFPYG--TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLP 58
+ LN YRFSI+WSRI P G + VN KG+ YY+ LI+ L+K+GITP+ L+H+DLP
Sbjct: 86 LDELNATGYRFSIAWSRIIPRGKRSRGVNQKGIDYYHGLIDGLIKKGITPFVTLFHWDLP 145
Query: 59 EALEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGR 118
+ L+ +Y G L +++ DF DYAD CF+ FGD VK W+T N+ V GY + APGR
Sbjct: 146 QTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGR 205
Query: 119 CSKAFG-NCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPL 177
CS +C GNS+TEPYIVAH+ +L+HA V G+IG + W+ P
Sbjct: 206 CSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVV-DLYRKNYTHQGGKIGPTMITRWFLPY 264
Query: 178 TRSKADNYAA-QRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDF 236
+ + AA +R + F +GWF+ P+ G YP+ M + VG RLP F+ EE +VKGS DF
Sbjct: 265 NDTDRHSIAATERMKQFFLGWFMGPLTNGTYPQIMIDTVGARLPTFSPEETNLVKGSYDF 324
Query: 237 VGINQY-TAYYMYDPHLKQPKQVGYQQDWNAGFAY-EKNGVPIGPR------ANSYWLYN 288
+G+N Y T Y P+ D A Y +G IGP S +Y
Sbjct: 325 LGLNYYFTQYAQPSPNPVNATNHTAMMDAGAKLTYINASGHYIGPLFESDGGDGSSNIYY 384
Query: 289 VPWGMYKALMYIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAV 348
P G+Y + Y K Y NP + ++ENG+ PG+ + + D TRI+Y +L L K +
Sbjct: 385 YPKGIYSVMDYFKNKYYNPLIYVTENGISTPGSENRKESMLDYTRIDYLCSHLCFLNKVI 444
Query: 349 -DDGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTNL-KRYPKMSAYWFKQLLK 402
+ NV GY AW+L DN+E+ G+T RFG+ Y+++ N+ R K S W+++ +
Sbjct: 445 KEKDVNVKGYLAWALGDNYEFNNGFTVRFGLSYINWNNVTDRDLKKSGQWYQKFIS 500
>pdb|3AHY|A Chain A, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|B Chain B, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|C Chain C, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|D Chain D, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
Length = 473
Score = 278 bits (711), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 167/412 (40%), Positives = 224/412 (54%), Gaps = 23/412 (5%)
Query: 1 MANLNFDAYRFSISWSRIFPYGT--GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLP 58
+ +L +YRFSISWSRI P G VN G+ +Y + ++ LL GITP+ L+H+DLP
Sbjct: 71 LKSLGAKSYRFSISWSRIIPEGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITLFHWDLP 130
Query: 59 EALEKKYNGLLSKRVVK-DFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPG 117
E L ++Y GLL++ DF +YA F+ +V+NW+TFNEP A GY +G FAPG
Sbjct: 131 EGLHQRYGGLLNRTEFPLDFENYARVMFRAL-PKVRNWITFNEPLCSAIPGYGSGTFAPG 189
Query: 118 RCSKAFGNCTVGNSATEPYIVAHNLILSHAAAVXX-XXXXXXXXXXGRIGILLDFVWYEP 176
R S +EP+ V HN++++H AV G+IGI+L+ + P
Sbjct: 190 R-----------QSTSEPWTVGHNILVAHGRAVKAYRDDFKPASGDGQIGIVLNGDFTYP 238
Query: 177 LTRSK-ADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSID 235
+ AD AA+R +F WF PI G+YP +M+ +G+RLP FT EE +V GS D
Sbjct: 239 WDAADPADKEAAERRLEFFTAWFADPIYLGDYPASMRKQLGDRLPTFTPEERALVHGSND 298
Query: 236 FVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYK 295
F G+N YT+ Y+ H P K G IGP S WL G
Sbjct: 299 FYGMNHYTSNYIR--HRSSPASADDTVGNVDVLFTNKQGNCIGPETQSPWLRPCAAGFRD 356
Query: 296 ALMYIKGHYGNPTVILSENGMDDPGNVTLPKG--LHDTTRINYYKGYLTQLKKAVD-DGA 352
L++I YG P + ++ENG G LPK L D R+ YY Y+ + AV+ DG
Sbjct: 357 FLVWISKRYGYPPIYVTENGTSIKGESDLPKEKILEDDFRVKYYNEYIRAMVTAVELDGV 416
Query: 353 NVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTN-LKRYPKMSAYWFKQLLKR 403
NV GYFAWSL+DNFEW GY +RFG+ YVD+ N KR+PK SA K L
Sbjct: 417 NVKGYFAWSLMDNFEWADGYVTRFGVTYVDYENGQKRFPKKSAKSLKPLFDE 468
>pdb|2E9L|A Chain A, Crystal Structure Of Human Cytosolic Neutral
Beta-Glycosylceramidase (Klotho-Related Prote:klrp)
Complex With Glucose And Fatty Acids
pdb|2E9M|A Chain A, Crystal Structure Of Human Cytosolic Neutral Beta-
Glycosylceramidase (Klotho-Related Prote:klrp) Complex
With Galactose And Fatty Acids
Length = 469
Score = 274 bits (701), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 165/420 (39%), Positives = 231/420 (55%), Gaps = 38/420 (9%)
Query: 1 MANLNFDAYRFSISWSRIFPYGT-GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPE 59
+ L YRFS+SWSR+ P GT G +N KG+ YYN++I+ LLK G+TP LYH+DLP+
Sbjct: 66 IKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQ 125
Query: 60 ALEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRC 119
LE + G LS+ +++ F YA FCF TFGDRVK W+T NE V++ + YD G F PG
Sbjct: 126 TLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPPG-- 182
Query: 120 SKAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLT- 178
+ + T Y AHNLI +HA + G + + L VW EP
Sbjct: 183 --------IPHFGTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADP 234
Query: 179 RSKADNYAAQRARDFHVGWFIHPI-VYGEYPKTMQNIVG----------NRLPKFTKEEV 227
S +D AA+RA FH+ F PI + G+YP+ +++ + +RLP+FT+EE
Sbjct: 235 NSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEK 294
Query: 228 KMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLY 287
KM+KG+ DF + YT + K+ ++G QD F P N W+Y
Sbjct: 295 KMIKGTADFFAVQYYTTRLIKYQENKK-GELGILQDAEIEF------FPDPSWKNVDWIY 347
Query: 288 NVPWGMYKALMYIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKA 347
VPWG+ K L YIK Y NP + ++ENG + P L DT R Y++ +L KA
Sbjct: 348 VVPWGVCKLLKYIKDTYNNPVIYITENGFPQ----SDPAPLDDTQRWEYFRQTFQELFKA 403
Query: 348 VD-DGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTN--LKRYPKMSAYWFKQLLKRN 404
+ D N+ Y AWSLLDNFEW GY+SRFG+ +VDF + R P SA + ++++ N
Sbjct: 404 IQLDKVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSAKEYAKIIRNN 463
>pdb|2JFE|X Chain X, The Crystal Structure Of Human Cytosolic Beta-Glucosidase
Length = 469
Score = 274 bits (701), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 165/420 (39%), Positives = 231/420 (55%), Gaps = 38/420 (9%)
Query: 1 MANLNFDAYRFSISWSRIFPYGT-GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPE 59
+ L YRFS+SWSR+ P GT G +N KG+ YYN++I+ LLK G+TP LYH+DLP+
Sbjct: 66 IKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQ 125
Query: 60 ALEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRC 119
LE + G LS+ +++ F YA FCF TFGDRVK W+T NE V++ + YD G F PG
Sbjct: 126 TLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPPG-- 182
Query: 120 SKAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLT- 178
+ + T Y AHNLI +HA + G + + L VW EP
Sbjct: 183 --------IPHFGTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADP 234
Query: 179 RSKADNYAAQRARDFHVGWFIHPI-VYGEYPKTMQNIVG----------NRLPKFTKEEV 227
S +D AA+RA FH+ F PI + G+YP+ +++ + +RLP+FT+EE
Sbjct: 235 NSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEK 294
Query: 228 KMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLY 287
KM+KG+ DF + YT + K+ ++G QD F P N W+Y
Sbjct: 295 KMIKGTADFFAVQYYTTRLIKYQENKK-GELGILQDAEIEF------FPDPSWINVDWIY 347
Query: 288 NVPWGMYKALMYIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKA 347
VPWG+ K L YIK Y NP + ++ENG + P L DT R Y++ +L KA
Sbjct: 348 VVPWGVCKLLKYIKDTYNNPVIYITENGFPQ----SDPAPLDDTQRWEYFRQTFQELFKA 403
Query: 348 VD-DGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTN--LKRYPKMSAYWFKQLLKRN 404
+ D N+ Y AWSLLDNFEW GY+SRFG+ +VDF + R P SA + ++++ N
Sbjct: 404 IQLDKVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSAKEYAKIIRNN 463
>pdb|2ZOX|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase
pdb|3VKK|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase-Mannose Complex
Length = 469
Score = 273 bits (697), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 164/420 (39%), Positives = 231/420 (55%), Gaps = 38/420 (9%)
Query: 1 MANLNFDAYRFSISWSRIFPYGT-GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPE 59
+ L YRFS+SWSR+ P GT G +N KG+ YYN++I+ LLK G+TP LYH+DLP+
Sbjct: 66 IKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQ 125
Query: 60 ALEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRC 119
LE + G LS+ +++ F YA FCF TFGDRVK W+T N+ V++ + YD G F PG
Sbjct: 126 TLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINQANVLSVMSYDLGMFPPG-- 182
Query: 120 SKAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLT- 178
+ + T Y AHNLI +HA + G + + L VW EP
Sbjct: 183 --------IPHFGTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADP 234
Query: 179 RSKADNYAAQRARDFHVGWFIHPI-VYGEYPKTMQNIVG----------NRLPKFTKEEV 227
S +D AA+RA FH+ F PI + G+YP+ +++ + +RLP+FT+EE
Sbjct: 235 NSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEK 294
Query: 228 KMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLY 287
KM+KG+ DF + YT + K+ ++G QD F P N W+Y
Sbjct: 295 KMIKGTADFFAVQYYTTRLIKYQENKK-GELGILQDAEIEF------FPDPSWKNVDWIY 347
Query: 288 NVPWGMYKALMYIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKA 347
VPWG+ K L YIK Y NP + ++ENG + P L DT R Y++ +L KA
Sbjct: 348 VVPWGVCKLLKYIKDTYNNPVIYITENGFPQ----SDPAPLDDTQRWEYFRQTFQELFKA 403
Query: 348 VD-DGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTN--LKRYPKMSAYWFKQLLKRN 404
+ D N+ Y AWSLLDNFEW GY+SRFG+ +VDF + R P SA + ++++ N
Sbjct: 404 IQLDKVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSAKEYAKIIRNN 463
>pdb|3AHZ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Tris
pdb|3VIF|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Gluconolactone
pdb|3VIG|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With 1-Deoxynojirimycin
pdb|3VIH|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glycerol
pdb|3VII|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Bis-Tris
Length = 487
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 161/426 (37%), Positives = 228/426 (53%), Gaps = 49/426 (11%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGK-VNWKGVAYYNQLINYLLKRGITPYANLYHYDLPE 59
+ L YRFSISW+R+ P G VN G+ YYN LIN LL GI P +YH+DLP+
Sbjct: 75 LKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQ 134
Query: 60 ALEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRC 119
AL + G + + K +YA FK FGDRVK W+TFNEP L + +G+ +
Sbjct: 135 AL-QDLGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNEP-----LTFMDGYASEIGM 188
Query: 120 SKAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTR 179
+ + +G+ Y+ AH +I +HA G++GI L+ W EP T
Sbjct: 189 APSINTPGIGD-----YLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEPATN 243
Query: 180 SKADNYAAQRARDFHVGWFIHPIVY--GEYPKTMQNIVG----------NRLPKFTKEEV 227
S D + + + F++G + HPI G+YP +++ V +RLP+FT EEV
Sbjct: 244 SAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEV 303
Query: 228 KMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIG-----PRAN 282
+ ++G+ DF+GIN YTA L + GY+ Y +GV + P +
Sbjct: 304 EYIRGTHDFLGINFYTAL------LGKSGVEGYEPS-----RYRDSGVILTQDAAWPISA 352
Query: 283 SYWLYNVPWGMYKALMYIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLT 342
S WL VPWG K L +IK Y NP V ++ENG D G GL+DT R++YY +L
Sbjct: 353 SSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYG------GLNDTGRVHYYTEHLK 406
Query: 343 QLKKAV-DDGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTN--LKRYPKMSAYWFKQ 399
++ KA+ +DG NV+GY AWSL+DNFEW GY+ +FGI VDF + R PK SA +
Sbjct: 407 EMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESAKVLAE 466
Query: 400 LLKRNK 405
++ K
Sbjct: 467 IMNTRK 472
>pdb|1OD0|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OD0|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIF|A Chain A, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIF|B Chain B, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIM|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIM|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1W3J|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1W3J|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1UZ1|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|1UZ1|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|2CBU|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBU|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBV|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CBV|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CES|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CES|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CET|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2CET|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2J77|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J77|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J78|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J78|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J79|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J79|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J7B|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7B|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7C|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7C|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7D|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7D|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7E|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7E|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7F|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7F|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7G|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7G|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7H|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J7H|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J75|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2J75|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2JAL|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2JAL|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2VRJ|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2VRJ|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2WBG|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WC3|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC4|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
Length = 468
Score = 255 bits (651), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 155/407 (38%), Positives = 228/407 (56%), Gaps = 35/407 (8%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
+ L AYRFSISW RI P GTG+VN KG+ +YN++I+ LL++GITP+ +YH+DLP A
Sbjct: 90 IEKLGVKAYRFSISWPRILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPFA 149
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
L+ K G ++ + FA+Y+ F+ FGDRVKNW+T NEP VVA +G+ G APG
Sbjct: 150 LQLK-GGWANREIADWFAEYSRVLFENFGDRVKNWITLNEPWVVAIVGHLYGVHAPG--- 205
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
+ V A HNL+ +HA AV G+IGI+ + ++EP +
Sbjct: 206 --MRDIYVAFRAV------HNLLRAHARAVKVFRETVKD---GKIGIVFNNGYFEPASEK 254
Query: 181 KADNYAAQRARDFH-VGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGI 239
+ D A + F+ F++PI G+YP+ + LP+ K+++ ++ IDFVG+
Sbjct: 255 EEDIRAVRFMHQFNNYPLFLNPIYRGDYPELVLEFAREYLPENYKDDMSEIQEKIDFVGL 314
Query: 240 NQYTAYYM-YDPHLKQPKQVGY-QQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKAL 297
N Y+ + + +DP P +V + ++D P+ W VP G+Y L
Sbjct: 315 NYYSGHLVKFDP--DAPAKVSFVERDL--------------PKTAMGWEI-VPEGIYWIL 357
Query: 298 MYIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANVVGY 357
+K Y P V ++ENG V+ +HD RI+Y K ++ Q KA+ +G + GY
Sbjct: 358 KKVKEEYNPPEVYITENGAAFDDVVSEDGRVHDQNRIDYLKAHIGQAWKAIQEGVPLKGY 417
Query: 358 FAWSLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLKRN 404
F WSLLDNFEW GY+ RFGIVYVD++ KR K S YW+ ++K N
Sbjct: 418 FVWSLLDNFEWAEGYSKRFGIVYVDYSTQKRIVKDSGYWYSNVVKNN 464
>pdb|3AI0|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With
Para-Nitrophenyl-Beta-D-Glucopyranoside
pdb|3VIM|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIN|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIO|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIP|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
Length = 487
Score = 254 bits (650), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 228/426 (53%), Gaps = 49/426 (11%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGK-VNWKGVAYYNQLINYLLKRGITPYANLYHYDLPE 59
+ L YRFSISW+R+ P G VN G+ YYN LIN LL GI P +YH+DLP+
Sbjct: 75 LKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQ 134
Query: 60 ALEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRC 119
AL + G + + K +YA FK FGDRVK W+TFN+P L + +G+ +
Sbjct: 135 AL-QDLGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNDP-----LTFMDGYASEIGM 188
Query: 120 SKAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTR 179
+ + +G+ Y+ AH +I +HA G++GI L+ W EP T
Sbjct: 189 APSINTPGIGD-----YLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEPATN 243
Query: 180 SKADNYAAQRARDFHVGWFIHPIVY--GEYPKTMQNIVG----------NRLPKFTKEEV 227
S D + + + F++G + HPI G+YP +++ V +RLP+FT EEV
Sbjct: 244 SAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEV 303
Query: 228 KMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIG-----PRAN 282
+ ++G+ DF+GIN YTA L + GY+ Y +GV + P +
Sbjct: 304 EYIRGTHDFLGINFYTAL------LGKSGVEGYEPS-----RYRDSGVILTQDAAWPISA 352
Query: 283 SYWLYNVPWGMYKALMYIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLT 342
S WL VPWG K L +IK Y NP V ++ENG D G GL+DT R++YY +L
Sbjct: 353 SSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYG------GLNDTGRVHYYTEHLK 406
Query: 343 QLKKAV-DDGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTN--LKRYPKMSAYWFKQ 399
++ KA+ +DG NV+GY AWSL+DNFEW GY+ +FGI VDF + R PK SA +
Sbjct: 407 EMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESAKVLAE 466
Query: 400 LLKRNK 405
++ K
Sbjct: 467 IMNTRK 472
>pdb|3VIK|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Cellobiose
pdb|3VIL|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Salicin
Length = 487
Score = 254 bits (649), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 227/426 (53%), Gaps = 49/426 (11%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGK-VNWKGVAYYNQLINYLLKRGITPYANLYHYDLPE 59
+ L YRFSISW+R+ P G VN G+ YYN LIN LL GI P +YH+DLP+
Sbjct: 75 LKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQ 134
Query: 60 ALEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRC 119
AL + G + + K +YA FK FGDRVK W+TFN P L + +G+ +
Sbjct: 135 AL-QDLGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNSP-----LTFMDGYASEIGM 188
Query: 120 SKAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTR 179
+ + +G+ Y+ AH +I +HA G++GI L+ W EP T
Sbjct: 189 APSINTPGIGD-----YLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEPATN 243
Query: 180 SKADNYAAQRARDFHVGWFIHPIVY--GEYPKTMQNIVG----------NRLPKFTKEEV 227
S D + + + F++G + HPI G+YP +++ V +RLP+FT EEV
Sbjct: 244 SAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEV 303
Query: 228 KMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIG-----PRAN 282
+ ++G+ DF+GIN YTA L + GY+ Y +GV + P +
Sbjct: 304 EYIRGTHDFLGINFYTAL------LGKSGVEGYEPS-----RYRDSGVILTQDAAWPISA 352
Query: 283 SYWLYNVPWGMYKALMYIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLT 342
S WL VPWG K L +IK Y NP V ++ENG D G GL+DT R++YY +L
Sbjct: 353 SSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYG------GLNDTGRVHYYTEHLK 406
Query: 343 QLKKAV-DDGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTN--LKRYPKMSAYWFKQ 399
++ KA+ +DG NV+GY AWSL+DNFEW GY+ +FGI VDF + R PK SA +
Sbjct: 407 EMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESAKVLAE 466
Query: 400 LLKRNK 405
++ K
Sbjct: 467 IMNTRK 472
>pdb|3VIJ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glucose
Length = 487
Score = 254 bits (648), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 227/426 (53%), Gaps = 49/426 (11%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGK-VNWKGVAYYNQLINYLLKRGITPYANLYHYDLPE 59
+ L YRFSISW+R+ P G VN G+ YYN LIN LL GI P +YH+DLP+
Sbjct: 75 LKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQ 134
Query: 60 ALEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRC 119
AL + G + + K +YA FK FGDRVK W+TFN P L + +G+ +
Sbjct: 135 AL-QDLGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNAP-----LTFMDGYASEIGM 188
Query: 120 SKAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTR 179
+ + +G+ Y+ AH +I +HA G++GI L+ W EP T
Sbjct: 189 APSINTPGIGD-----YLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEPATN 243
Query: 180 SKADNYAAQRARDFHVGWFIHPIVY--GEYPKTMQNIVG----------NRLPKFTKEEV 227
S D + + + F++G + HPI G+YP +++ V +RLP+FT EEV
Sbjct: 244 SAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEV 303
Query: 228 KMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIG-----PRAN 282
+ ++G+ DF+GIN YTA L + GY+ Y +GV + P +
Sbjct: 304 EYIRGTHDFLGINFYTAL------LGKSGVEGYEPS-----RYRDSGVILTQDAAWPISA 352
Query: 283 SYWLYNVPWGMYKALMYIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLT 342
S WL VPWG K L +IK Y NP V ++ENG D G GL+DT R++YY +L
Sbjct: 353 SSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYG------GLNDTGRVHYYTEHLK 406
Query: 343 QLKKAV-DDGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTN--LKRYPKMSAYWFKQ 399
++ KA+ +DG NV+GY AWSL+DNFEW GY+ +FGI VDF + R PK SA +
Sbjct: 407 EMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESAKVLAE 466
Query: 400 LLKRNK 405
++ K
Sbjct: 467 IMNTRK 472
>pdb|1QOX|A Chain A, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|B Chain B, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|C Chain C, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|D Chain D, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|E Chain E, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|F Chain F, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|G Chain G, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|H Chain H, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|I Chain I, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|J Chain J, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|K Chain K, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|L Chain L, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|M Chain M, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|N Chain N, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|O Chain O, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|P Chain P, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
Length = 449
Score = 251 bits (642), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 150/408 (36%), Positives = 217/408 (53%), Gaps = 35/408 (8%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
+ +L YRFSISW R+ P GTG+VN G+ YY++L++ LL GI P+ LYH+DLP+A
Sbjct: 67 LKDLGVKVYRFSISWPRVLPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLPQA 126
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
L+ + G S+ + FA+YA+ FK G ++K W+TFNEP +A L G APG
Sbjct: 127 LQDQ-GGWGSRITIDAFAEYAELMFKELGGKIKQWITFNEPWCMAFLSNYLGVHAPG--- 182
Query: 121 KAFGNCTVGNSATEPYI-VAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTR 179
N + I V+H+L+++H AV G IGI + W P R
Sbjct: 183 ---------NKDLQLAIDVSHHLLVAHGRAVTLFRELGIS---GEIGIAPNTSWAVPYRR 230
Query: 180 SKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNR--LPKFTKEEVKMVKGSIDFV 237
+K D A R + W++ PI +GEYPK M + N P +++++ IDF+
Sbjct: 231 TKEDMEACLRVNGWSGDWYLDPIYFGEYPKFMLDWYENLGYKPPIVDGDMELIHQPIDFI 290
Query: 238 GINQYTAYY-MYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIG-PRANSYWLYNVPWGMYK 295
GIN YT+ Y+P AG + +G P+ + W G+Y
Sbjct: 291 GINYYTSSMNRYNPG-------------EAGGMLSSEAISMGAPKTDIGWEIYAE-GLYD 336
Query: 296 ALMYIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANVV 355
L Y YGNPT+ ++ENG ++L +HD RI+Y +L Q +A++DG N+
Sbjct: 337 LLRYTADKYGNPTLYITENGACYNDGLSLDGRIHDQRRIDYLAMHLIQASRAIEDGINLK 396
Query: 356 GYFAWSLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLKR 403
GY WSL+DNFEW GY RFG+V+VD+ L R PK S YW+K ++ R
Sbjct: 397 GYMEWSLMDNFEWAEGYGMRFGLVHVDYDTLVRTPKDSFYWYKGVISR 444
>pdb|1WCG|A Chain A, Aphid Myrosinase
pdb|1WCG|B Chain B, Aphid Myrosinase
Length = 464
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 151/426 (35%), Positives = 219/426 (51%), Gaps = 51/426 (11%)
Query: 1 MANLNFDAYRFSISWSRIFPYGT-GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPE 59
+ +LN YRFSISW+RI P G + KG+AYYN LIN L+K I P +YH+DLP+
Sbjct: 68 IKDLNLKFYRFSISWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHWDLPQ 127
Query: 60 ALEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRC 119
L+ G ++ + F +YA F FGDRVK W+TFNEP V GY +AP
Sbjct: 128 YLQD-LGGWVNPIMSDYFKEYARVLFTYFGDRVKWWITFNEPIAVCK-GYSIKAYAPNLN 185
Query: 120 SKAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPL-T 178
K G+ Y+ H +++H A G+I I + V++ P
Sbjct: 186 LKTTGH----------YLAGHTQLIAHGKAYRLYEEMFKPTQNGKISISISGVFFMPKNA 235
Query: 179 RSKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVG----------NRLPKFTKEEVK 228
S D A+RA F GWF HP+ G+YP M+ V ++LPKFTK+E+K
Sbjct: 236 ESDDDIETAERANQFERGWFGHPVYKGDYPPIMKKWVDQKSKEEGLPWSKLPKFTKDEIK 295
Query: 229 MVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVP------IGPRAN 282
++KG+ DF +N Y++ + V + D N F + + V + P
Sbjct: 296 LLKGTADFYALNHYSS-----------RLVTFGSDPNPNFNPDASYVTSVDEAWLKPNET 344
Query: 283 SYWLYNVPWGMYKALMYIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLT 342
Y + VP G+ K L+++K YGNP ++++ENG D G L D +I+Y K YL
Sbjct: 345 PY-IIPVPEGLRKLLIWLKNEYGNPQLLITENGYGDDGQ------LDDFEKISYLKNYLN 397
Query: 343 QLKKAV-DDGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTNLK--RYPKMSAYWFKQ 399
+A+ +D NV+GY WSLLDNFEW GY+ FG+V +DF + + R + S +FK
Sbjct: 398 ATLQAMYEDKCNVIGYTVWSLLDNFEWFYGYSIHFGLVKIDFNDPQRTRTKRESYTYFKN 457
Query: 400 LLKRNK 405
++ K
Sbjct: 458 VVSTGK 463
>pdb|1E4I|A Chain A, 2-Deoxy-2-Fluoro-Beta-D-GlucosylENZYME INTERMEDIATE
Complex Of The Beta-Glucosidase From Bacillus Polymyxa
Length = 447
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/410 (33%), Positives = 215/410 (52%), Gaps = 41/410 (10%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
M L YRFS+SW RIFP G G+VN KG+ YY+++++ L GI P+ LYH+DLP+A
Sbjct: 67 MKELGIRTYRFSVSWPRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQA 126
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
L+ G ++R ++ F +A+ F+ F ++++W+TFNEP +A L G APG
Sbjct: 127 LQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPG--- 182
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
T +A + V H+L+++H +V G+IGI + W P + S
Sbjct: 183 -----LTNLQTAID---VGHHLLVAHGLSVRRFRELGTS---GQIGIAPNVSWAVPYSTS 231
Query: 181 KADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIV---GNRLPKFTKEEVKMVKGSIDFV 237
+ D A R H WF+ PI G YP+ + + G +P ++ ++ ID +
Sbjct: 232 EEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPIDMI 290
Query: 238 GINQYT-AYYMYDPHLKQPKQVGYQQ--DWNAGFAYEKNGVPIGPRANSYWLYNVPWGMY 294
GIN Y+ + ++P + G+ Q + N G G P+ R G+Y
Sbjct: 291 GINYYSMSVNRFNP------EAGFLQSEEINMGLPVTDIGWPVESR-----------GLY 333
Query: 295 KALMYIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANV 354
+ L Y++ YGN + ++ENG V K + D RI+Y + +L Q+ + + DG +V
Sbjct: 334 EVLHYLQ-KYGNIDIYITENGACINDEVVNGK-VQDDRRISYMQQHLVQVHRTIHDGLHV 391
Query: 355 VGYFAWSLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLKRN 404
GY AWSLLDNFEW GY RFG+++VDF R PK S YW++ ++ N
Sbjct: 392 KGYMAWSLLDNFEWAEGYNMRFGMIHVDFRTQVRTPKQSYYWYRNVVSNN 441
>pdb|1UYQ|A Chain A, Mutated B-Glucosidase A From Paenibacillus Polymyxa
Showing Increased Stability
Length = 447
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/410 (33%), Positives = 216/410 (52%), Gaps = 41/410 (10%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
M L YRFS+SW RIFP G G+VN +G+ YY+++++ L GI P+ LYH+DLP+A
Sbjct: 67 MKELGIRTYRFSVSWPRIFPNGDGEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQA 126
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
L+ G ++R ++ F +A+ F+ F ++++W+TFNEP +A L G APG
Sbjct: 127 LQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPG--- 182
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
T +A + V H+L+++H +V G+IGI + W P + S
Sbjct: 183 -----LTNLQTAID---VGHHLLVAHGLSVRRFRELGTS---GQIGIAPNVSWAVPYSTS 231
Query: 181 KADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIV---GNRLPKFTKEEVKMVKGSIDFV 237
+ D A R H WF+ PI G YP+ + + G +P ++ ++ ID +
Sbjct: 232 EEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPIDMI 290
Query: 238 GINQYT-AYYMYDPHLKQPKQVGYQQ--DWNAGFAYEKNGVPIGPRANSYWLYNVPWGMY 294
GIN Y+ + ++P + G+ Q + N G G P+ R G+Y
Sbjct: 291 GINYYSMSVNRFNP------EAGFLQSEEINMGLPVTDIGWPVESR-----------GLY 333
Query: 295 KALMYIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANV 354
+ L Y++ YGN + ++ENG V K + D RI+Y + +L Q+ +A+ DG +V
Sbjct: 334 EVLHYLQ-KYGNIDIYITENGACINDEVVNGK-VQDDRRISYMQQHLVQVHRAIHDGLHV 391
Query: 355 VGYFAWSLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLKRN 404
GY AWSLLDNFEW GY RFG+++VDF R PK S YW++ ++ N
Sbjct: 392 KGYMAWSLLDNFEWAEGYNMRFGMIHVDFRTQVRTPKQSYYWYRNVVGNN 441
>pdb|1TR1|A Chain A, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|B Chain B, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|C Chain C, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|D Chain D, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
Length = 447
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/410 (33%), Positives = 215/410 (52%), Gaps = 41/410 (10%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
M L YRFS+SW RIFP G G+VN KG+ YY+++++ L GI P+ LYH+DLP+A
Sbjct: 67 MKELGIRTYRFSVSWPRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQA 126
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
L+ G ++R ++ F +A+ F+ F ++++W+TFNEP +A L G APG
Sbjct: 127 LQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPG--- 182
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
T +A + V H+L+++H +V G+IGI + W P + S
Sbjct: 183 -----LTNLQTAID---VGHHLLVAHGLSVRRFRELGTS---GQIGIAPNVSWAVPYSTS 231
Query: 181 KADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIV---GNRLPKFTKEEVKMVKGSIDFV 237
+ D A R H WF+ PI G YP+ + + G +P ++ ++ ID +
Sbjct: 232 EEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPIDMI 290
Query: 238 GINQYT-AYYMYDPHLKQPKQVGYQQ--DWNAGFAYEKNGVPIGPRANSYWLYNVPWGMY 294
GIN Y+ + ++P + G+ Q + N G G P+ R G+Y
Sbjct: 291 GINYYSMSVNRFNP------EAGFLQSEEINMGLPVTDIGWPVESR-----------GLY 333
Query: 295 KALMYIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANV 354
+ L Y++ YGN + ++ENG V K + D RI+Y + +L Q+ + + DG +V
Sbjct: 334 EVLHYLQ-KYGNIDIYITENGACINDEVVNGK-VQDDRRISYMQQHLVQVHRTIHDGLHV 391
Query: 355 VGYFAWSLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLKRN 404
GY AWSLLDNFEW GY RFG+++VDF R PK S YW++ ++ N
Sbjct: 392 KGYMAWSLLDNFEWAEGYNMRFGMIHVDFRTQVRTPKESYYWYRNVVSNN 441
>pdb|1BGG|A Chain A, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|B Chain B, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|C Chain C, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|D Chain D, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
Length = 448
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 138/410 (33%), Positives = 215/410 (52%), Gaps = 41/410 (10%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
M L YRFS+SW RIFP G G+VN +G+ YY+++++ L GI P+ LYH+DLP+A
Sbjct: 68 MKELGIRTYRFSVSWPRIFPNGDGEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQA 127
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
L+ G ++R ++ F +A+ F+ F ++++W+TFNEP +A L G APG
Sbjct: 128 LQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPG--- 183
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
T +A + V H+L+++H +V G+IGI + W P + S
Sbjct: 184 -----LTNLQTAID---VGHHLLVAHGLSVRRFRELGTS---GQIGIAPNVSWAVPYSTS 232
Query: 181 KADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIV---GNRLPKFTKEEVKMVKGSIDFV 237
+ D A R H WF+ PI G YP+ + + G +P ++ ++ ID +
Sbjct: 233 EEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPIDMI 291
Query: 238 GINQYT-AYYMYDPHLKQPKQVGYQQ--DWNAGFAYEKNGVPIGPRANSYWLYNVPWGMY 294
GIN Y+ + ++P + G+ Q + N G G P+ R G+Y
Sbjct: 292 GINYYSMSVNRFNP------EAGFLQSEEINMGLPVTDIGWPVESR-----------GLY 334
Query: 295 KALMYIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANV 354
+ L Y++ YGN + ++ENG V K + D RI+Y + +L Q+ + + DG +V
Sbjct: 335 EVLHYLQ-KYGNIDIYITENGACINDEVVNGK-VQDDRRISYMQQHLVQVHRTIHDGLHV 392
Query: 355 VGYFAWSLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLKRN 404
GY AWSLLDNFEW GY RFG+++VDF R PK S YW++ ++ N
Sbjct: 393 KGYMAWSLLDNFEWAEGYNMRFGMIHVDFRTQVRTPKESYYWYRNVVSNN 442
>pdb|1BGA|A Chain A, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|B Chain B, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|C Chain C, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|D Chain D, Beta-Glucosidase A From Bacillus Polymyxa
Length = 447
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 138/410 (33%), Positives = 215/410 (52%), Gaps = 41/410 (10%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
M L YRFS+SW RIFP G G+VN +G+ YY+++++ L GI P+ LYH+DLP+A
Sbjct: 67 MKELGIRTYRFSVSWPRIFPNGDGEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQA 126
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
L+ G ++R ++ F +A+ F+ F ++++W+TFNEP +A L G APG
Sbjct: 127 LQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPG--- 182
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
T +A + V H+L+++H +V G+IGI + W P + S
Sbjct: 183 -----LTNLQTAID---VGHHLLVAHGLSVRRFRELGTS---GQIGIAPNVSWAVPYSTS 231
Query: 181 KADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIV---GNRLPKFTKEEVKMVKGSIDFV 237
+ D A R H WF+ PI G YP+ + + G +P ++ ++ ID +
Sbjct: 232 EEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPIDMI 290
Query: 238 GINQYT-AYYMYDPHLKQPKQVGYQQ--DWNAGFAYEKNGVPIGPRANSYWLYNVPWGMY 294
GIN Y+ + ++P + G+ Q + N G G P+ R G+Y
Sbjct: 291 GINYYSMSVNRFNP------EAGFLQSEEINMGLPVTDIGWPVESR-----------GLY 333
Query: 295 KALMYIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANV 354
+ L Y++ YGN + ++ENG V K + D RI+Y + +L Q+ + + DG +V
Sbjct: 334 EVLHYLQ-KYGNIDIYITENGACINDEVVNGK-VQDDRRISYMQQHLVQVHRTIHDGLHV 391
Query: 355 VGYFAWSLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLKRN 404
GY AWSLLDNFEW GY RFG+++VDF R PK S YW++ ++ N
Sbjct: 392 KGYMAWSLLDNFEWAEGYNMRFGMIHVDFRTQVRTPKESYYWYRNVVSNN 441
>pdb|3TA9|A Chain A, Beta-Glucosidase A From The Halothermophile H. Orenii
pdb|3TA9|B Chain B, Beta-Glucosidase A From The Halothermophile H. Orenii
Length = 458
Score = 224 bits (572), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 142/408 (34%), Positives = 209/408 (51%), Gaps = 31/408 (7%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
M + +YRFS SW RI P G G+VN KG+ +Y +L++ LLK I P LYH+DLP+A
Sbjct: 75 MKEIGIRSYRFSTSWPRILPEGKGRVNQKGLDFYKRLVDNLLKANIRPMITLYHWDLPQA 134
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
L+ K G ++ K FA+YA F+ F V W+T NEP VVA G+ G APG +
Sbjct: 135 LQDK-GGWTNRDTAKYFAEYARLMFEEFNGLVDLWVTHNEPWVVAFEGHAFGNHAPG--T 191
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
K F VAH+L+LSH AV G IGI L+ P S
Sbjct: 192 KDFKTALQ---------VAHHLLLSHGMAVDIFREEDLP---GEIGITLNLTPAYPAGDS 239
Query: 181 KADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKE--EVKMVKGSIDFVG 238
+ D AA D+ WF+ P+ G YP+ + +I L FT + ++ ++ IDF+G
Sbjct: 240 EKDVKAASLLDDYINAWFLSPVFKGSYPEELHHIYEQNLGAFTTQPGDMDIISRDIDFLG 299
Query: 239 INQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALM 298
IN Y+ + V + + F E + P W P G+Y L+
Sbjct: 300 INYYS------------RMVVRHKPGDNLFNAEVVKMEDRPSTEMGWEI-YPQGLYDILV 346
Query: 299 YIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANVVGYF 358
+ Y + + ++ENG +T +HD RINY + Q KA+ DG + GY+
Sbjct: 347 RVNKEYTDKPLYITENGAAFDDKLTEEGKIHDEKRINYLGDHFKQAYKALKDGVPLRGYY 406
Query: 359 AWSLLDNFEWRLGYTSRFGIVYVDFTN-LKRYPKMSAYWFKQLLKRNK 405
WSL+DNFEW GY+ RFG++YVD+ N +R+ K SA W+++++++ +
Sbjct: 407 VWSLMDNFEWAYGYSKRFGLIYVDYENGNRRFLKDSALWYREVIEKGQ 454
>pdb|4HZ6|A Chain A, Crystal Structure Of Bglb
pdb|4HZ7|A Chain A, Crystal Structure Of Bglb With Glucose
pdb|4HZ8|A Chain A, Crystal Structure Of Bglb With Natural Substrate
Length = 444
Score = 222 bits (565), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 203/405 (50%), Gaps = 32/405 (7%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
M L YRFSI+W+RI P + ++N +G+ +Y +L+ L KR I P A LYH+DLP+
Sbjct: 67 MRQLGLKTYRFSIAWARIQPDSSRQINQRGLDFYRRLVEGLHKRDILPMATLYHWDLPQW 126
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
+E + G LS+ FA+Y GD++ W+T NEP V GY G FAPG
Sbjct: 127 VEDE-GGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEPMVTVWAGYHMGLFAPGLKD 185
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
G VAH+L+LSH A+ ++GI L+F P++
Sbjct: 186 PTLGGR-----------VAHHLLLSHGQALQAFRALSPAG--SQMGITLNFNTIYPVSAE 232
Query: 181 KADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKF-TKEEVKMVKGSIDFVGI 239
AD AA+R F F+ P++ G+Y + N LP+F E+++ + IDF+G+
Sbjct: 233 PADVEAARRMHSFQNELFLEPLIRGQYNQATLMAYPN-LPEFIAPEDMQTISAPIDFLGV 291
Query: 240 NQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMY 299
N Y M QP + Q E +G W P G+Y LM
Sbjct: 292 NYYNP--MRVKSSPQPPGIEVVQ-------VESPVTAMG------WEI-APEGLYDLLMG 335
Query: 300 IKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANVVGYFA 359
I YG + ++ENG ++D R+ Y++G++ ++A+ DG ++ GY+A
Sbjct: 336 ITRTYGKLPIYITENGAAFDDQPDQSGQVNDPQRVGYFQGHIGAARRALADGVDLRGYYA 395
Query: 360 WSLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLKRN 404
WSLLDNFEW GY+ RFGI+YVDF +R K SA W++ ++ N
Sbjct: 396 WSLLDNFEWAEGYSKRFGIIYVDFETQQRTLKQSAQWYRDVIANN 440
>pdb|3CMJ|A Chain A, Crystal Structure Of Engineered Beta-Glucosidase From Soil
Metagenome
Length = 465
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 203/405 (50%), Gaps = 32/405 (7%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
M L YRFSI+W+RI P + ++N +G+ +Y +L+ L KR I P A LYH+DLP+
Sbjct: 88 MRQLGLKTYRFSIAWARIQPDSSRQINQRGLDFYRRLVEGLHKRDILPMATLYHWDLPQW 147
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
+E + G LS+ FA+Y GD++ W+T NEP V GY G FAPG
Sbjct: 148 VEDE-GGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEPMVTVWAGYHMGLFAPGLKD 206
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
G VAH+L+LSH A+ ++GI L+F P++
Sbjct: 207 PTLGGR-----------VAHHLLLSHGQALQAFRALSPAG--SQMGITLNFNTIYPVSAE 253
Query: 181 KADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKF-TKEEVKMVKGSIDFVGI 239
AD AA+R F F+ P++ G+Y + N LP+F E+++ + IDF+G+
Sbjct: 254 PADVEAARRMHSFQNELFLEPLIRGQYNQATLMAYPN-LPEFIAPEDMQTISAPIDFLGV 312
Query: 240 NQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMY 299
N Y M QP + Q E +G W P G+Y LM
Sbjct: 313 NYYNP--MRVKSSPQPPGIEVVQ-------VESPVTAMG------WEI-APEGLYDLLMG 356
Query: 300 IKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANVVGYFA 359
I YG + ++ENG ++D R+ Y++G++ ++A+ DG ++ GY+A
Sbjct: 357 ITRTYGKLPIYITENGAAFDDQPDQSGQVNDPQRVGYFQGHIGAARRALADGVDLRGYYA 416
Query: 360 WSLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLKRN 404
WSLLDNFEW GY+ RFGI+YVDF +R K SA W++ ++ N
Sbjct: 417 WSLLDNFEWAEGYSKRFGIIYVDFETQQRTLKQSAQWYRDVIANN 461
>pdb|3AHX|A Chain A, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|B Chain B, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|C Chain C, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|D Chain D, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
Length = 453
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/407 (34%), Positives = 207/407 (50%), Gaps = 34/407 (8%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
+ +L +YRFSI+W RIFP G G++N KG+ +Y LI+ L+K I P +YH+DLP+
Sbjct: 68 LKSLGIKSYRFSIAWPRIFPKGFGEINQKGIQFYRDLIDELIKNDIEPAITIYHWDLPQK 127
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
L+ G + +V + DYA+ F+ FGDRVK W+T NEP V + LGY G APG
Sbjct: 128 LQD-IGGWANPQVADYYVDYANLLFREFGDRVKTWITHNEPWVASYLGYALGVHAPGIKD 186
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
+ AHN++LSH AV G+IGI L+ +
Sbjct: 187 MKMA-----------LLAAHNILLSHFKAVKAYRELEQD---GQIGITLNLSTCYSNSAD 232
Query: 181 KADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVG--NRLPKFTKEEVKMVKGSIDFVG 238
+ D AA R+ ++ WF+ + G YP+ M I N +P+ KE V + DF+G
Sbjct: 233 EEDIAAAHRSDGWNNRWFLDAALKGTYPEDMIKIFSDTNIMPELPKELFTEVFETSDFLG 292
Query: 239 INQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYW-LYNVPWGMYKAL 297
IN YT +QV ++ + F ++ P+ W +Y P G+Y L
Sbjct: 293 INYYT------------RQV--VKNNSEAFIGAESVAMDNPKTEMGWEIY--PQGLYDLL 336
Query: 298 MYIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANVVGY 357
I YGN + ++ENG V + D R++Y + A++ G + GY
Sbjct: 337 TRIHRDYGNIDLYITENGAAFNDMVNRDGKVEDENRLDYLYTHFAAALSAIEAGVPLKGY 396
Query: 358 FAWSLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLKRN 404
+ WS +DNFEW GY RFGIV+V++ +R K SAYW+K+L++R+
Sbjct: 397 YIWSFMDNFEWAEGYEKRFGIVHVNYKTQERTIKKSAYWYKELIERS 443
>pdb|1GNX|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GNX|B Chain B, B-Glucosidase From Streptomyces Sp
pdb|1GON|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GON|B Chain B, B-Glucosidase From Streptomyces Sp
Length = 479
Score = 201 bits (512), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 201/420 (47%), Gaps = 45/420 (10%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
MA L AYRFS++W RI P G G KG+ +Y +L + LL +GI P A LYH+DLP+
Sbjct: 80 MAELGLGAYRFSLAWPRIQPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYHWDLPQE 139
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
LE G + + FA+YA GDRVK W T NEP A LGY +G APGR
Sbjct: 140 LENA-GGWPERATAERFAEYAAIAADALGDRVKTWTTLNEPWCSAFLGYGSGVHAPGR-- 196
Query: 121 KAFGNCTVGNSATEPYIV---AHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPL 177
T+P AH+L L H AV + + L+ PL
Sbjct: 197 ------------TDPVAALRAAHHLNLGHGLAVQALRDRLPAD--AQCSVTLNIHHVRPL 242
Query: 178 TRSKADNYAAQRARDFHVGWFIHPIVYGEYPKTM-QNIVGNRLPKFTKE-EVKMVKGSID 235
T S AD A +R F P++ G YP+ + ++ G F ++ ++++ +D
Sbjct: 243 TDSDADADAVRRIDALANRVFTGPMLQGAYPEDLVKDTAGLTDWSFVRDGDLRLAHQKLD 302
Query: 236 FVGINQYTAYYMYDP-----HLKQPKQVGYQQDWNAG--FAYEKNGVPIGPRANSYWLYN 288
F+G+N Y+ + + H W A+ + P G W +
Sbjct: 303 FLGVNYYSPTLVSEADGSGTHNSDGHGRSAHSPWPGADRVAFHQ---PPGETTAMGWAVD 359
Query: 289 VPWGMYKALMYIKGHYGNPTVILSENGM------DDPGNVTLPKGLHDTTRINYYKGYLT 342
P G+Y+ L + + ++++ENG D GNV P+ RI Y + +L
Sbjct: 360 -PSGLYELLRRLSSDFPALPLVITENGAAFHDYADPEGNVNDPE------RIAYVRDHLA 412
Query: 343 QLKKAVDDGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLK 402
+ +A+ DG++V GYF WSLLDNFEW GY+ RFG VYVD+ R PK SA W+ ++ +
Sbjct: 413 AVHRAIKDGSDVRGYFLWSLLDNFEWAHGYSKRFGAVYVDYPTGTRIPKASARWYAEVAR 472
>pdb|2O9R|A Chain A, Beta-Glucosidase B Complexed With Thiocellobiose
Length = 452
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 199/414 (48%), Gaps = 47/414 (11%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
M L F YRFS++W RI P G +N +G+ +Y L++ + G+ P LYH+DLP+
Sbjct: 74 MKQLGFLHYRFSVAWPRIMP-AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQW 132
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
+E + G + ++ F YA FG+R+ W T NEP + LGY G APG
Sbjct: 133 IEDE-GGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPGH-- 189
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
+ E + AH++++ H A G+IGI L+ + +
Sbjct: 190 ---------ENWREAFTAAHHILMCHGIA---SNLHKEKGLTGKIGITLNMEHVDAASER 237
Query: 181 KADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVG---NRLPKFTKEEVKMVKGSIDFV 237
D AA R F WF P+ G+YP+ M G N L ++++++ DF+
Sbjct: 238 PEDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGDFL 297
Query: 238 GINQYTAYYMY---DPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMY 294
GIN YT + D L Q +QV ++ P + W + P Y
Sbjct: 298 GINYYTRSIIRSTNDASLLQVEQVHMEE----------------PVTDMGWEIH-PESFY 340
Query: 295 KALMYIKGHY--GNPTVILSENG--MDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDD 350
K L I+ + G P ++++ENG M D + + DT R Y + +L + +++
Sbjct: 341 KLLTRIEKDFSKGLP-ILITENGAAMRDE---LVNGQIEDTGRQRYIEEHLKACHRFIEE 396
Query: 351 GANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLKRN 404
G + GYF WS LDNFEW GY+ RFGIV++++ +R PK SA WFKQ++ +N
Sbjct: 397 GGQLKGYFVWSFLDNFEWAWGYSKRFGIVHINYETQERTPKQSALWFKQMMAKN 450
>pdb|2O9P|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa
pdb|2O9T|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
Glucose
pdb|2Z1S|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa Complexed
With Cellotetraose
Length = 454
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 199/414 (48%), Gaps = 47/414 (11%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
M L F YRFS++W RI P G +N +G+ +Y L++ + G+ P LYH+DLP+
Sbjct: 76 MKQLGFLHYRFSVAWPRIMP-AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQW 134
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
+E + G + ++ F YA FG+R+ W T NEP + LGY G APG
Sbjct: 135 IEDE-GGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPGH-- 191
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
+ E + AH++++ H A G+IGI L+ + +
Sbjct: 192 ---------ENWREAFTAAHHILMCHGIA---SNLHKEKGLTGKIGITLNMEHVDAASER 239
Query: 181 KADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVG---NRLPKFTKEEVKMVKGSIDFV 237
D AA R F WF P+ G+YP+ M G N L ++++++ DF+
Sbjct: 240 PEDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGDFL 299
Query: 238 GINQYTAYYMY---DPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMY 294
GIN YT + D L Q +QV ++ P + W + P Y
Sbjct: 300 GINYYTRSIIRSTNDASLLQVEQVHMEE----------------PVTDMGWEIH-PESFY 342
Query: 295 KALMYIKGHY--GNPTVILSENG--MDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDD 350
K L I+ + G P ++++ENG M D + + DT R Y + +L + +++
Sbjct: 343 KLLTRIEKDFSKGLP-ILITENGAAMRDE---LVNGQIEDTGRQRYIEEHLKACHRFIEE 398
Query: 351 GANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLKRN 404
G + GYF WS LDNFEW GY+ RFGIV++++ +R PK SA WFKQ++ +N
Sbjct: 399 GGQLKGYFVWSFLDNFEWAWGYSKRFGIVHINYETQERTPKQSALWFKQMMAKN 452
>pdb|2JIE|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
2- F-Glucose
Length = 454
Score = 195 bits (496), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 199/414 (48%), Gaps = 47/414 (11%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
M L F YRFS++W RI P G +N +G+ +Y L++ + G+ P LYH+DLP+
Sbjct: 76 MKQLGFLHYRFSVAWPRIMP-AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQW 134
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
+E + G + ++ F YA FG+R+ W T NEP + LGY G APG
Sbjct: 135 IEDE-GGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPGH-- 191
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
+ E + AH++++ H A G+IGI L+ + +
Sbjct: 192 ---------ENWREAFTAAHHILMCHGIA---SNLHKEKGLTGKIGITLNMEHVDAASER 239
Query: 181 KADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVG---NRLPKFTKEEVKMVKGSIDFV 237
D AA R F WF P+ G+YP+ M G N L ++++++ DF+
Sbjct: 240 PEDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGDFL 299
Query: 238 GINQYTAYYMY---DPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMY 294
GIN YT + D L Q +QV ++ P + W + P Y
Sbjct: 300 GINYYTRSIIRSTNDASLLQVEQVHMEE----------------PVTDMGWEIH-PESFY 342
Query: 295 KALMYIKGHY--GNPTVILSENG--MDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDD 350
K L I+ + G P ++++ENG M D + + DT R Y + +L + +++
Sbjct: 343 KLLTRIEKDFSKGLP-ILITENGAAMRDE---LVNGQIEDTGRHGYIEEHLKACHRFIEE 398
Query: 351 GANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLKRN 404
G + GYF WS LDNFEW GY+ RFGIV++++ +R PK SA WFKQ++ +N
Sbjct: 399 GGQLKGYFVWSFLDNFEWAWGYSKRFGIVHINYETQERTPKQSALWFKQMMAKN 452
>pdb|4B3K|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
Length = 479
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/414 (31%), Positives = 208/414 (50%), Gaps = 26/414 (6%)
Query: 1 MANLNFDAYRFSISWSRIFP-YGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPE 59
+A+L ++YR SI W+R+ + +N G+AYYN++I+ L GI P NL+H+DLP
Sbjct: 64 LASLGHNSYRTSIQWTRLIDDFEQATINPDGLAYYNRVIDACLANGIRPVINLHHFDLPI 123
Query: 60 ALEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRC 119
AL + Y G SK VV F ++ CF+ FGDRVK+W NEP VV Y F P
Sbjct: 124 ALYQAYGGWESKHVVDLFVAFSKVCFEQFGDRVKDWFVHNEPMVVVEGSYLMQFHYPAIV 183
Query: 120 SKAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTR 179
G A + VA+NL L+ A + GRIG +L+ P ++
Sbjct: 184 D--------GKKAVQ---VAYNLALATAKVIQAYRRGPAELSDGRIGTILNLTPAYPASQ 232
Query: 180 SKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNR--LPKFTKEEVKMV-KGSIDF 236
S+AD AA A ++ F+ V+G++P+ + ++ L + T EE+ ++ + +D+
Sbjct: 233 SEADMAAAHFAELWNNDLFMEAAVHGKFPEELVAVLKKDGVLWQSTPEELALIAENRVDY 292
Query: 237 VGINQYTAYYMYDPHLKQPKQVGY-QQDWNAGFAYEKNGVPIGPRANSYWLYNV-PWGMY 294
+G+N Y + +K P + W+ + Y+ +P G R N + + P +Y
Sbjct: 293 LGLNFY-----HPKRVKAPDAIPVISPSWSPEWYYDPYLMP-GRRMNVDKGWEIYPEAVY 346
Query: 295 KALMYIKGHYGNPTVILSENGMDDPGN---VTLPKGLHDTTRINYYKGYLTQLKKAVDDG 351
+ ++ HY N LSENG+ G + D RI + K +LT L K ++ G
Sbjct: 347 DIAIKMRDHYDNIPWFLSENGVGISGEDRYRDETGQIQDDYRIQFLKEHLTYLHKGIEAG 406
Query: 352 ANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLKRNK 405
+N GY W+ +D + W Y +R+G+V + R PK SAYWFK++ N+
Sbjct: 407 SNCFGYHVWTPIDGWSWLNAYKNRYGLVENNIHTQVRRPKASAYWFKKVATHNR 460
>pdb|1UG6|A Chain A, Structure Of Beta-Glucosidase At Atomic Resolution From
Thermus Thermophilus Hb8
Length = 431
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 134/405 (33%), Positives = 201/405 (49%), Gaps = 40/405 (9%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
M +L AYRFS++W RI P G G++N KG+A+Y++L++ LL GITP+ LYH+DLP A
Sbjct: 66 MQSLGVRAYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLA 125
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
LE++ G S+ FA+YA+ + DRV + T NEP A LG+ G APG
Sbjct: 126 LEER-GGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTGEHAPG--- 181
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
N A AH+L+L H AV R+GI+L+F
Sbjct: 182 --LRNLEAALRA------AHHLLLGHGLAVEALRAAGAR----RVGIVLNFA-----PAY 224
Query: 181 KADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGIN 240
D A A +H +F+ PI+ YP++ +P +++ +++V +DF+G+N
Sbjct: 225 GEDPEAVDVADRYHNRFFLDPILGKGYPESPFRDPPP-VPILSRD-LELVARPLDFLGVN 282
Query: 241 QYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYI 300
Y P +V G + P GP W P G+Y L +
Sbjct: 283 YYA-----------PVRVAP----GTGTLPVRYLPPEGPATAMGWEV-YPEGLYHLLKRL 326
Query: 301 KGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANVVGYFAW 360
P + +ENG P T + D R+ Y + ++ +A ++G ++ GYF W
Sbjct: 327 GREVPWPLYV-TENGAAYPDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVW 385
Query: 361 SLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLKRNK 405
SL+DNFEW GYT RFG+ YVDF + +R PK SA W+++ + R +
Sbjct: 386 SLMDNFEWAFGYTRRFGLYYVDFPSQRRIPKRSALWYRERIARAQ 430
>pdb|1NP2|A Chain A, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
pdb|1NP2|B Chain B, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
Length = 436
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/406 (32%), Positives = 196/406 (48%), Gaps = 42/406 (10%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
M +L YRFS++W RI P G G++N KG+A+Y++L++ LL GITP+ LYH+DLP+A
Sbjct: 66 MQSLGVGVYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLAAGITPFLTLYHWDLPQA 125
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
LE + G S+ FA+YA+ + DRV + T NEP A LG+ G APG
Sbjct: 126 LEDR-GGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTGEHAPG--- 181
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
N A AH+L+L H AV R+GI+L+F
Sbjct: 182 --LRNLEAALRA------AHHLLLGHGLAVEALRAAGAR----RVGIVLNFA-----PAY 224
Query: 181 KADNYAAQRARDFHVGWFIHPIVYGEYPKT-MQNIVGNRLPKFTKEEVKMVKGSIDFVGI 239
D A A +H +F+ PI+ YP++ Q+ +++ + +DF+G+
Sbjct: 225 GEDPEAVDVADRYHNRYFLDPILGRGYPESPFQDPPPA---PILSRDLEAIARPLDFLGV 281
Query: 240 NQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMY 299
N Y + P V Y P GP W P G+Y L
Sbjct: 282 NYYAPVRVAPG--TGPLPVRYLP-------------PEGPVTAMGWEV-YPEGLYHLLKR 325
Query: 300 IKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANVVGYFA 359
+ P I +ENG P T + D R+ Y + ++ +A ++G ++ GYF
Sbjct: 326 LGREVPWPLYI-TENGAAYPDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFV 384
Query: 360 WSLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLKRNK 405
WSL+DNFEW GYT RFG+ YVDF + +R PK SA W+++ + R +
Sbjct: 385 WSLMDNFEWAFGYTRRFGLYYVDFPSQRRIPKRSALWYRERIARAQ 430
>pdb|3ZJK|A Chain A, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|B Chain B, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|C Chain C, Crystal Structure Of Ttb-gly F401s Mutant
Length = 431
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 132/405 (32%), Positives = 201/405 (49%), Gaps = 40/405 (9%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
M +L AYRFS++W RI P G G++N KG+A+Y++L++ LL GITP+ LYH+DLP A
Sbjct: 66 MQSLGVRAYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLA 125
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
LE++ G S+ FA+YA+ + DRV + T NEP A LG+ G APG
Sbjct: 126 LEER-GGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTGEHAPG--- 181
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
N A AH+L+L H AV R+GI+L+F
Sbjct: 182 --LRNLEAALRA------AHHLLLGHGLAVEALRAAGAR----RVGIVLNFA-----PAY 224
Query: 181 KADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGIN 240
D A A +H +F+ PI+ YP++ +P +++ +++V +DF+G+N
Sbjct: 225 GEDPEAVDVADRYHNRFFLDPILGKGYPESPFRDPPP-VPILSRD-LELVARPLDFLGVN 282
Query: 241 QYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYI 300
Y P +V G + P GP W P G++ L +
Sbjct: 283 YYA-----------PVRVAP----GTGTLPVRYLPPEGPATAMGWEV-YPEGLHHLLKRL 326
Query: 301 KGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANVVGYFAW 360
P + ++ENG P T + D R+ Y + ++ +A ++G ++ GYF W
Sbjct: 327 GREVPWP-LYVTENGAAYPDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVW 385
Query: 361 SLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLKRNK 405
SL+DNFEW GYT R G+ YVDF + +R PK SA W+++ + R +
Sbjct: 386 SLMDNFEWAFGYTRRSGLYYVDFPSQRRIPKRSALWYRERIARAQ 430
>pdb|1PBG|A Chain A, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|1PBG|B Chain B, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|3PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-C
pdb|3PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-C
Length = 468
Score = 181 bits (459), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 137/411 (33%), Positives = 201/411 (48%), Gaps = 37/411 (9%)
Query: 10 RFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYNG-L 68
R SI+WSRIFP G G+VN KGV +Y++L KR + P+ L+H+D PEAL NG
Sbjct: 72 RISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEALHS--NGDF 129
Query: 69 LSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSKAFGNCTV 128
L++ ++ F DYA FCF+ F + V W TFNE + Y G F PG +
Sbjct: 130 LNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPG----------I 178
Query: 129 GNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRSKADNYAAQ 188
+ + HN+++SHA AV G + L Y+P + AD AA+
Sbjct: 179 KYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDP--ENPADVRAAE 236
Query: 189 RARDFHVGWFIHPIVYGEYP-KTMQNIV------GNRLPKFTK--EEVKMVKGSIDFVGI 239
H + + G Y KTM+ + G L + + + K DF+GI
Sbjct: 237 LEDIIHNKFILDATYLGHYSDKTMEGVNHILAENGGELDLRDEDFQALDAAKDLNDFLGI 296
Query: 240 NQYTAYYMYDPHLKQPKQVGYQQDWNAGFA-YEKNGV------PIGPRANSYWLYNVPWG 292
N Y + +M ++ + G + Y+ GV PR + W+ P G
Sbjct: 297 NYYMSDWM--QAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYVPRTDWDWII-YPEG 353
Query: 293 MYKALMYIKGHYGN-PTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDG 351
+Y +M +K Y N + ++ENG+ + ++D RI+Y K +L L A+ DG
Sbjct: 354 LYDQIMRVKNDYPNYKKIYITENGLGYKDEF-VDNTVYDDGRIDYVKQHLEVLSDAIADG 412
Query: 352 ANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLK 402
ANV GYF WSL+D F W GY R+G+ YVDF +RYPK SA+W+K+L +
Sbjct: 413 ANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFDTQERYPKKSAHWYKKLAE 463
>pdb|2PBG|A Chain A, 6-Phospho-Beta-D-Galactosidase Form-B
Length = 468
Score = 181 bits (458), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 137/411 (33%), Positives = 201/411 (48%), Gaps = 37/411 (9%)
Query: 10 RFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYNG-L 68
R SI+WSRIFP G G+VN KGV +Y++L KR + P+ L+H+D PEAL NG
Sbjct: 72 RISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEALHS--NGDF 129
Query: 69 LSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSKAFGNCTV 128
L++ ++ F DYA FCF+ F + V W TFNE + Y G F PG +
Sbjct: 130 LNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPG----------I 178
Query: 129 GNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRSKADNYAAQ 188
+ + HN+++SHA AV G + L Y+P + AD AA+
Sbjct: 179 KYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDP--ENPADVRAAE 236
Query: 189 RARDFHVGWFIHPIVYGEY-PKTMQNIV------GNRLPKFTK--EEVKMVKGSIDFVGI 239
H + + G Y KTM+ + G L + + + K DF+GI
Sbjct: 237 LEDIIHNKFILDATYLGHYCDKTMEGVNHILAENGGELDLRDEDFQALDAAKDLNDFLGI 296
Query: 240 NQYTAYYMYDPHLKQPKQVGYQQDWNAGFA-YEKNGV------PIGPRANSYWLYNVPWG 292
N Y + +M ++ + G + Y+ GV PR + W+ P G
Sbjct: 297 NYYMSDWM--QAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYVPRTDWDWII-YPEG 353
Query: 293 MYKALMYIKGHYGN-PTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDG 351
+Y +M +K Y N + ++ENG+ + ++D RI+Y K +L L A+ DG
Sbjct: 354 LYDQIMRVKNDYPNYKKIYITENGLGYKDEF-VDNTVYDDGRIDYVKQHLEVLSDAIADG 412
Query: 352 ANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLK 402
ANV GYF WSL+D F W GY R+G+ YVDF +RYPK SA+W+K+L +
Sbjct: 413 ANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFDTQERYPKKSAHWYKKLAE 463
>pdb|4PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-Cst
pdb|4PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-Cst
Length = 468
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 136/411 (33%), Positives = 200/411 (48%), Gaps = 37/411 (9%)
Query: 10 RFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYNG-L 68
R SI+WSRIFP G G+VN KGV +Y++L KR + P+ L+H+D PEAL NG
Sbjct: 72 RISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEALHS--NGDF 129
Query: 69 LSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSKAFGNCTV 128
L++ ++ F DYA FCF+ F + V W TFNE + Y G F PG +
Sbjct: 130 LNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPG----------I 178
Query: 129 GNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRSKADNYAAQ 188
+ + HN+++SHA AV G + L Y+P + AD AA+
Sbjct: 179 KYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDP--ENPADVRAAE 236
Query: 189 RARDFHVGWFIHPIVYGEYP-KTMQNIV------GNRLPKFTK--EEVKMVKGSIDFVGI 239
H + + G Y KTM+ + G L + + + K DF+GI
Sbjct: 237 LEDIIHNKFILDATYLGHYSDKTMEGVNHILAENGGELDLRDEDFQALDAAKDLNDFLGI 296
Query: 240 NQYTAYYMYDPHLKQPKQVGYQQDWNAGFA-YEKNGV------PIGPRANSYWLYNVPWG 292
N Y + +M ++ + G + Y+ GV PR + W+ P G
Sbjct: 297 NYYMSDWM--QAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYVPRTDWDWII-YPEG 353
Query: 293 MYKALMYIKGHYGN-PTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDG 351
+Y +M +K Y N + ++ NG+ + ++D RI+Y K +L L A+ DG
Sbjct: 354 LYDQIMRVKNDYPNYKKIYITCNGLGYKDEF-VDNTVYDDGRIDYVKQHLEVLSDAIADG 412
Query: 352 ANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLK 402
ANV GYF WSL+D F W GY R+G+ YVDF +RYPK SA+W+K+L +
Sbjct: 413 ANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFDTQERYPKKSAHWYKKLAE 463
>pdb|1VFF|A Chain A, Beta-Glycosidase From Pyrococcus Horikoshii
Length = 423
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 183/406 (45%), Gaps = 58/406 (14%)
Query: 1 MANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
M +L ++AYRFSI WSR+FP K N Y ++I+ LL RGITP L+H+ P
Sbjct: 59 MTSLGYNAYRFSIEWSRLFP-EENKFNEDAFMKYREIIDLLLTRGITPLVTLHHFTSPLW 117
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
KK G L + +K + Y + + ++VK TFNEP V +GY ++ P
Sbjct: 118 FMKK-GGFLREENLKHWEKYIEKVAELL-EKVKLVATFNEPMVYVMMGYLTAYWPP---- 171
Query: 121 KAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRS 180
S + + VA NL+ +HA A I I+L P +
Sbjct: 172 -------FIRSPFKAFKVAANLLKAHAIAYELLHGKFKVGIVKNIPIIL------PASDK 218
Query: 181 KADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGIN 240
+ D AA++A + F+ I G+Y + R+P+ DF+G+N
Sbjct: 219 ERDRKAAEKADNLFNWHFLDAIWSGKYRGVFKTY---RIPQ----------SDADFIGVN 265
Query: 241 QYTAYYMYDPHLKQPKQVGYQQDWNA-GFAYEKNGVPIGPRANSYWLYNVPWGMYKALMY 299
YTA + + WN F +E I R P G+Y AL
Sbjct: 266 YYTASEV-------------RHTWNPLKFFFEVKLADISERKTQMGWSVYPKGIYMALKK 312
Query: 300 IKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANVVGYFA 359
YG P I +ENG+ L D R+ + +L + KA++DG +V GYF
Sbjct: 313 -ASRYGRPLYI-TENGI---------ATLDDEWRVEFIIQHLQYVHKAIEDGLDVRGYFY 361
Query: 360 WSLLDNFEWRLGYTSRFGIVYVDFTNLKRYPKMSAYWFKQLLKRNK 405
WS +DN+EW+ G+ RFG+V VD+ +R P+ SAY + ++ + +
Sbjct: 362 WSFMDNYEWKEGFGPRFGLVEVDYQTFERRPRKSAYVYGEIARSKE 407
>pdb|4F66|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate.
pdb|4F66|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate
Length = 480
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 123/421 (29%), Positives = 194/421 (46%), Gaps = 42/421 (9%)
Query: 2 ANLNFDAYRFSISWSRIFPYG-TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
A + F +R SI+W+RIFP G + N G+ +Y+ L + LK GI P L H++LP
Sbjct: 80 AEMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIEPVVTLSHFELPYH 139
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
L +Y G +++V+ F +A+ CF+ + D+VK WMTFNE A D FAP
Sbjct: 140 LVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNEINNQANYQED---FAP---- 192
Query: 121 KAFGNCTV-----GNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYE 175
F N + + Y AH +++ A AV IG ++
Sbjct: 193 --FTNSGIVYKEGDDREAIMYQAAHYELVASARAVKIGHAINPNL---NIGCMVAMCPIY 247
Query: 176 PLTRSKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPK--FTKEEVK-MVKG 232
P T + D AQ+A +F V+G YP+ + + K FT+ + K + +G
Sbjct: 248 PATCNPKDILMAQKAMQKRY-YFADVHVHGFYPEHIFKYWERKAIKVDFTERDKKDLFEG 306
Query: 233 SIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRAN-SYWLYNV-P 290
++D++G + Y ++ + D H + Y E + P S W + + P
Sbjct: 307 TVDYIGFSYYMSFVI-DAHRENNPYYDY---------LETEDLVKNPYVKASDWDWQIDP 356
Query: 291 WGMYKALMYIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVD- 349
G+ AL + Y P I+ ENG V +HD RI+Y ++ ++ KAVD
Sbjct: 357 QGLRYALNWFTDMYHLPLFIV-ENGFGAIDQVEADGMVHDDYRIDYLGAHIKEMIKAVDE 415
Query: 350 DGANVVGYFAWSLLDNFEWRLG-YTSRFGIVYVDFTN-----LKRYPKMSAYWFKQLLKR 403
DG ++GY W +D G R+G +YVD + LKR PK+S W+K+++
Sbjct: 416 DGVELMGYTPWGCIDLVSAGTGEMRKRYGFIYVDKDDEGKGTLKRSPKLSFNWYKEVIAS 475
Query: 404 N 404
N
Sbjct: 476 N 476
>pdb|3QOM|A Chain A, Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Lactobacillus Plantarum
pdb|4GZE|A Chain A, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|B Chain B, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|C Chain C, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|D Chain D, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|E Chain E, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|F Chain F, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
Length = 481
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 190/418 (45%), Gaps = 38/418 (9%)
Query: 1 MANLNFDAYRFSISWSRIFPYG-TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPE 59
A F +R SI+W+RIFP G + N G+ +Y+ L + LK GI P L H++ P
Sbjct: 83 FAEXGFKCFRTSIAWTRIFPNGDESEPNEAGLQFYDDLFDECLKNGIQPVVTLAHFEXPY 142
Query: 60 ALEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRC 119
L K+Y G ++++++ + ++A CF+ + D+V W TFNE D
Sbjct: 143 HLVKQYGGWRNRKLIQFYLNFAKVCFERYRDKVTYWXTFNEINNQTNFESDGAXLTDSGI 202
Query: 120 SKAFGNCTVGNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTR 179
G N Y AH +++ AAAV +IG + PLT
Sbjct: 203 IHQPGE----NRERWXYQAAHYELVASAAAVQLGHQINPDF---QIGCXIAXCPIYPLTA 255
Query: 180 SKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRL--PKFTKEEVKMVK-GSIDF 236
+ AD AQRA +F G YP+ ++N + T E++K+++ G++D+
Sbjct: 256 APADVLFAQRAXQTRF-YFADVHCNGTYPQWLRNRFESEHFNLDITAEDLKILQAGTVDY 314
Query: 237 VGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAY-EKNGVPIGPRAN-SYWLYNV-PWGM 293
+G + Y ++ + D AY E++ + P S W + V P G+
Sbjct: 315 IGFSYYXSFTVKD---------------TGKLAYNEEHDLVKNPYVKASDWGWQVDPVGL 359
Query: 294 YKALMYIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAV-DDGA 352
A + Y P I+ ENG+ T +HD RI+Y +L Q+K AV +DG
Sbjct: 360 RYAXNWFTDRYHLPLFIV-ENGLGAIDKKTADNQIHDDYRIDYLTDHLRQIKLAVLEDGV 418
Query: 353 NVVGYFAWSLLDNFEWRLGYTS-RFGIVYVDFTN-----LKRYPKMSAYWFKQLLKRN 404
+++GY W +D G S R+G +YVD + LKRY K S WF+ ++ N
Sbjct: 419 DLIGYTPWGCIDLVAASTGQXSKRYGFIYVDENDDGSGSLKRYKKDSFTWFQHVIATN 476
>pdb|4F79|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase Mutant
(E375q) In Complex With Salicin 6-Phosphate
pdb|4GPN|A Chain A, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate.
pdb|4GPN|B Chain B, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate
Length = 480
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 194/421 (46%), Gaps = 42/421 (9%)
Query: 2 ANLNFDAYRFSISWSRIFPYG-TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
A + F +R SI+W+RIFP G + N G+ +Y+ L + LK GI P L H++LP
Sbjct: 80 AEMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIEPVVTLSHFELPYH 139
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
L +Y G +++V+ F +A+ CF+ + D+VK WMTFNE A D FAP
Sbjct: 140 LVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNEINNQANYQED---FAP---- 192
Query: 121 KAFGNCTV-----GNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYE 175
F N + + Y AH +++ A AV IG ++
Sbjct: 193 --FTNSGIVYKEGDDREAIMYQAAHYELVASARAVKIGHAINPNL---NIGCMVAMCPIY 247
Query: 176 PLTRSKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPK--FTKEEVK-MVKG 232
P T + D AQ+A +F V+G YP+ + + K FT+ + K + +G
Sbjct: 248 PATCNPKDILMAQKAMQKRY-YFADVHVHGFYPEHIFKYWERKAIKVDFTERDKKDLFEG 306
Query: 233 SIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRAN-SYWLYNV-P 290
++D++G + Y ++ + D H + Y E + P S W + + P
Sbjct: 307 TVDYIGFSYYMSFVI-DAHRENNPYYDY---------LETEDLVKNPYVKASDWDWQIDP 356
Query: 291 WGMYKALMYIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVD- 349
G+ AL + Y P I+ +NG V +HD RI+Y ++ ++ KAVD
Sbjct: 357 QGLRYALNWFTDMYHLPLFIV-QNGFGAIDQVEADGMVHDDYRIDYLGAHIKEMIKAVDE 415
Query: 350 DGANVVGYFAWSLLDNFEWRLG-YTSRFGIVYVDFTN-----LKRYPKMSAYWFKQLLKR 403
DG ++GY W +D G R+G +YVD + LKR PK+S W+K+++
Sbjct: 416 DGVELMGYTPWGCIDLVSAGTGEMRKRYGFIYVDKDDEGKGTLKRSPKLSFNWYKEVIAS 475
Query: 404 N 404
N
Sbjct: 476 N 476
>pdb|3PN8|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
pdb|3PN8|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
Length = 480
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 189/422 (44%), Gaps = 42/422 (9%)
Query: 1 MANLNFDAYRFSISWSRIFPYG-TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPE 59
A F +R SI+W+RIFP G + N G+ +Y+ L + LK GI P L H++LP
Sbjct: 79 FAEXGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIEPVVTLSHFELPY 138
Query: 60 ALEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRC 119
L +Y G +++V+ F +A+ CF+ + D+VK W TFNE A D FAP
Sbjct: 139 HLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWXTFNEINNQANYQED---FAP--- 192
Query: 120 SKAFGNCTV-----GNSATEPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWY 174
F N + + Y AH +++ A AV IG +
Sbjct: 193 ---FTNSGIVYKEGDDREAIXYQAAHYELVASARAVKIGHAINPNL---NIGCXVAXCPI 246
Query: 175 EPLTRSKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPK--FTKEEVK-MVK 231
P T + D AQ+A +F V+G YP+ + + K FT+ + K + +
Sbjct: 247 YPATCNPKDILXAQKAXQKRY-YFADVHVHGFYPEHIFKYWERKAIKVDFTERDKKDLFE 305
Query: 232 GSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRAN-SYWLYNV- 289
G++D++G + Y ++ + D H + Y E + P S W + +
Sbjct: 306 GTVDYIGFSYYXSFVI-DAHRENNPYYDY---------LETEDLVKNPYVKASDWDWQID 355
Query: 290 PWGMYKALMYIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVD 349
P G+ AL + Y P I+ ENG V +HD RI+Y ++ + KAVD
Sbjct: 356 PQGLRYALNWFTDXYHLPLFIV-ENGFGAIDQVEADGXVHDDYRIDYLGAHIKEXIKAVD 414
Query: 350 -DGANVVGYFAWSLLDNFEWRLG-YTSRFGIVYVDFTN-----LKRYPKMSAYWFKQLLK 402
DG + GY W +D G R+G +YVD + LKR PK+S W+K+++
Sbjct: 415 EDGVELXGYTPWGCIDLVSAGTGEXRKRYGFIYVDKDDEGKGTLKRSPKLSFNWYKEVIA 474
Query: 403 RN 404
N
Sbjct: 475 SN 476
>pdb|2XHY|A Chain A, Crystal Structure Of E.Coli Bgla
pdb|2XHY|B Chain B, Crystal Structure Of E.Coli Bgla
pdb|2XHY|C Chain C, Crystal Structure Of E.Coli Bgla
pdb|2XHY|D Chain D, Crystal Structure Of E.Coli Bgla
Length = 479
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 196/423 (46%), Gaps = 48/423 (11%)
Query: 2 ANLNFDAYRFSISWSRIFPYG-TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEA 60
A + F +R SI+W+RIFP G + N +G+ +Y+ + + LLK I P L H+++P
Sbjct: 81 AEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLH 140
Query: 61 LEKKYNGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 120
L ++Y +++VV F +A+ F+ + +VK WMTFNE + + AP
Sbjct: 141 LVQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNE------INNQRNWRAP---- 190
Query: 121 KAFGNCTVGNSATEP-------YIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVW 173
FG C G TE Y V H+ ++ A AV ++G +L V
Sbjct: 191 -LFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRINPEM---KVGCMLAMVP 246
Query: 174 YEPLTRSKADNYAAQRA-RDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVK---M 229
P + + D AQ + R+ +V F + G YP + N R E+ +
Sbjct: 247 LYPYSCNPDDVMFAQESMRERYV--FTDVQLRGYYPSYVLNEWERRGFNIKMEDGDLDVL 304
Query: 230 VKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLYNV 289
+G+ D++G +YYM + K G D +GF + VP S W + +
Sbjct: 305 REGTCDYLGF----SYYMTNA----VKAEGGTGDAISGF---EGSVPNPYVKASDWGWQI 353
Query: 290 -PWGMYKALMYIKGHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAV 348
P G+ AL + Y P I+ ENG V ++D RI+Y + ++ ++KKAV
Sbjct: 354 DPVGLRYALCELYERYQRPLFIV-ENGFGAYDKVEEDGSINDDYRIDYLRAHIEEMKKAV 412
Query: 349 D-DGANVVGYFAWSLLDNFEWRLG-YTSRFGIVYVD-----FTNLKRYPKMSAYWFKQLL 401
DG +++GY W +D + G Y+ R+G +YV+ ++ R K S W+K+++
Sbjct: 413 TYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFNWYKEVI 472
Query: 402 KRN 404
N
Sbjct: 473 ASN 475
>pdb|3APG|A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|B Chain B, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|C Chain C, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|D Chain D, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
Length = 473
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 177/446 (39%), Gaps = 105/446 (23%)
Query: 4 LNFDAYRFSISWSRIFPYGTGKV-----------------------------NWKGVAYY 34
L D R I W+RIFP T V N + + +Y
Sbjct: 72 LGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHY 131
Query: 35 NQLINYLLKRGITPYANLYHYDLPEAL-----------EKKYNGLLSKRVVKDFADYADF 83
++ + +RG T NLYH+ LP + ++ G L ++ V +F +A F
Sbjct: 132 RKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAF 191
Query: 84 CFKTFGDRVKNWMTFNEPRVVAALGYDN--GFFAPGRCSKAFGNCTVGNSATEPYIVAHN 141
D V W T NEP VV GY N F PG S A E N
Sbjct: 192 VAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLS---------FEAAEK--AKFN 240
Query: 142 LILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRSKADNYAAQRARDFHVGWFIHP 201
LI +H A +G++ F W++PL D R +D+ +H
Sbjct: 241 LIQAHIGAYDAIKEYSEKS----VGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHS 296
Query: 202 IVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYT--AYYMYDPHLKQPKQVG 259
KG +D++G+N Y+ Y D HL G
Sbjct: 297 -----------------------------KGKLDWIGVNYYSRLVYGAKDGHLVPLPGYG 327
Query: 260 YQQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKGHYGNPTVILSENGMDDP 319
+ + GFA K+G P A+ + P G+ L Y+ Y P +I++ENGM D
Sbjct: 328 FMSE-RGGFA--KSGRP----ASDFGWEMYPEGLENLLKYLNNAYELP-MIITENGMADA 379
Query: 320 GNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANVVGYFAWSLLDNFEWRLGYTSRFGIV 379
D R +Y +L + A+ +GA+V GY WSL DN+EW G+ RFG+V
Sbjct: 380 A---------DRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLV 430
Query: 380 YVDFTNLKRYPKMSAYWFKQLLKRNK 405
YVDF KRY + SA F+++ + +
Sbjct: 431 YVDFETKKRYLRPSALVFREIATQKE 456
>pdb|4HA3|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Tris
pdb|4HA4|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Glycerol
Length = 489
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 188/442 (42%), Gaps = 93/442 (21%)
Query: 4 LNFDAYRFSISWSRIFPYGTGKV----------------------------NWKGVAYYN 35
+ A R + WSRIFP T V N + +Y
Sbjct: 73 MGLTAARIGVEWSRIFPRPTFDVKVDAEVKGDDVLSVYVSEGALEQLDKMANRDAINHYR 132
Query: 36 QLINYLLKRGITPYANLYHYDLPEALEKKY----------NGLLSKRVVKDFADYADFCF 85
++ + L RGIT NLYH+ LP L +G L R V +FA ++ +
Sbjct: 133 EMFSDLRSRGITFILNLYHWPLPLWLHDPIAIRRGNLSAPSGWLDVRTVIEFAKFSAYVA 192
Query: 86 KTFGDRVKNWMTFNEPRVVAALGYD--NGFFAPG-RCSKAFGNCTVGNSATEPYIVAHNL 142
D V + T NEP VV LGY F PG C + G NL
Sbjct: 193 WKLDDLVYMYSTMNEPNVVWGLGYAAVKSGFPPGYLCLECAGRAM------------KNL 240
Query: 143 ILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRSKADNYAAQRARDFHVGW-FIHP 201
+ +HA A +G++ + PLT AD AA+RA+ F W F
Sbjct: 241 VQAHARAYDAVKAITKKP----VGVIYANSDFTPLT--DADREAAERAK-FDNRWAFFDA 293
Query: 202 IVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQ 261
+V G+ L T++++K G +D++G+N YT + + + GY+
Sbjct: 294 VVRGQ------------LGGSTRDDLK---GRLDWIGVNYYTR------QVVRARGSGYE 332
Query: 262 QDWNAGFAYEKNGV-PIGPRANSYWLYNVPWGMYKALMYIKGHYGNPTVILSENGMDDPG 320
G E NGV P G + + P G+Y L Y P ++++ENG+ D G
Sbjct: 333 IVPGYGHGCEPNGVSPAGRPCSDFGWEFYPEGLYNVLKEYWDRYHLP-LLVTENGIADEG 391
Query: 321 NVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANVVGYFAWSLLDNFEWRLGYTSRFGIVY 380
D R Y ++ Q+ +A+ DG NV+GY WSL DN+EW G++ RFG++
Sbjct: 392 ---------DYQRPYYLVSHVYQVHRALQDGVNVIGYLHWSLADNYEWASGFSKRFGLLM 442
Query: 381 VDFTNLKRYPKMSAYWFKQLLK 402
VD++ + + + SA+ ++++ K
Sbjct: 443 VDYSTKRLHWRPSAFIYREIAK 464
>pdb|4EAM|A Chain A, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAM|B Chain B, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAN|A Chain A, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
pdb|4EAN|B Chain B, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
Length = 489
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 180/432 (41%), Gaps = 86/432 (19%)
Query: 10 RFSISWSRIFPYGTGK---------------------------VNWKGVAYYNQLINYLL 42
R ++ WSRIFP + N + +Y ++ L
Sbjct: 79 RLNVEWSRIFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHYREIFKDLK 138
Query: 43 KRGITPYANLYHYDLPEALEKKY----------NGLLSKRVVKDFADYADFCFKTFGDRV 92
RG+ N+YH+ LP L +G LS R V +FA ++ + F D V
Sbjct: 139 SRGLYFILNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVYEFARFSAYIAWKFDDLV 198
Query: 93 KNWMTFNEPRVVAALGYD--NGFFAPGRCSKAFGNCTVGNSATEPYIVAHNLILSHAAAV 150
+ T NEP VV LGY F PG S + +N+I +HA A
Sbjct: 199 DEYSTMNEPNVVGGLGYVGVKSGFPPGYLSFELSRRAM-----------YNIIQAHARAY 247
Query: 151 XXXXXXXXXXXXGRIGILLDFVWYEPLTRSKADNYAAQRARDFHVGWFIHPIVYGEYPKT 210
+GI+ ++PLT D A + A + + WF I+ GE +
Sbjct: 248 DGIKSVSKKP----VGIIYANSSFQPLT--DKDMEAVEMAENDNRWWFFDAIIRGEITRG 301
Query: 211 MQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAY 270
+ IV + L KG +D++G+N YT + + + GY G
Sbjct: 302 NEKIVRDDL-----------KGRLDWIGVNYYTRTVV------KRTEKGYVSLGGYGHGC 344
Query: 271 EKNGVPIG--PRANSYWLYNVPWGMYKALMYIKGHYGNPTVILSENGMDDPGNVTLPKGL 328
E+N V + P ++ W + P G+Y L Y + + ++ENG+ D
Sbjct: 345 ERNSVSLAGLPTSDFGWEF-FPEGLYDVLTKYWNRY-HLYMYVTENGIADDA-------- 394
Query: 329 HDTTRINYYKGYLTQLKKAVDDGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTNLKR 388
D R Y ++ Q+ +A++ GA+V GY WSL DN+EW G++ RFG++ VD+ +
Sbjct: 395 -DYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADNYEWASGFSMRFGLLKVDYNTKRL 453
Query: 389 YPKMSAYWFKQL 400
Y + SA ++++
Sbjct: 454 YWRPSALVYREI 465
>pdb|1UWQ|A Chain A, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWQ|B Chain B, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWR|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWR|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWS|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWS|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWT|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWT|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWU|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|1UWU|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|2CEQ|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CEQ|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CER|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
pdb|2CER|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
Length = 489
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 180/432 (41%), Gaps = 86/432 (19%)
Query: 10 RFSISWSRIFPYGTGK---------------------------VNWKGVAYYNQLINYLL 42
R ++ WSRIFP + N + +Y ++ L
Sbjct: 79 RLNVEWSRIFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHYREIFKDLK 138
Query: 43 KRGITPYANLYHYDLPEALEKKY----------NGLLSKRVVKDFADYADFCFKTFGDRV 92
RG+ N+YH+ LP L +G LS R V +FA ++ + F D V
Sbjct: 139 SRGLYFILNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVYEFARFSAYIAWKFDDLV 198
Query: 93 KNWMTFNEPRVVAALGYD--NGFFAPGRCSKAFGNCTVGNSATEPYIVAHNLILSHAAAV 150
+ T NEP VV LGY F PG S + +N+I +HA A
Sbjct: 199 DEYSTMNEPNVVGGLGYVGVKSGFPPGYLSFELSRRAM-----------YNIIQAHARAY 247
Query: 151 XXXXXXXXXXXXGRIGILLDFVWYEPLTRSKADNYAAQRARDFHVGWFIHPIVYGEYPKT 210
+GI+ ++PLT D A + A + + WF I+ GE +
Sbjct: 248 DGIKSVSKKP----VGIIYANSSFQPLT--DKDMEAVEMAENDNRWWFFDAIIRGEITRG 301
Query: 211 MQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAY 270
+ IV + L KG +D++G+N YT + + + GY G
Sbjct: 302 NEKIVRDDL-----------KGRLDWIGVNYYTRTVV------KRTEKGYVSLGGYGHGC 344
Query: 271 EKNGVPIG--PRANSYWLYNVPWGMYKALMYIKGHYGNPTVILSENGMDDPGNVTLPKGL 328
E+N V + P ++ W + P G+Y L Y + + ++ENG+ D
Sbjct: 345 ERNSVSLAGLPTSDFGWEF-FPEGLYDVLTKYWNRY-HLYMYVTENGIADDA-------- 394
Query: 329 HDTTRINYYKGYLTQLKKAVDDGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTNLKR 388
D R Y ++ Q+ +A++ GA+V GY WSL DN+EW G++ RFG++ VD+ +
Sbjct: 395 -DYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADNYEWASGFSMRFGLLKVDYNTKRL 453
Query: 389 YPKMSAYWFKQL 400
Y + SA ++++
Sbjct: 454 YWRPSALVYREI 465
>pdb|1GOW|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus
pdb|1GOW|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus
Length = 489
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 170/389 (43%), Gaps = 59/389 (15%)
Query: 26 VNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKY----------NGLLSKRVVK 75
N + +Y ++ L RG+ N+YH+ LP L +G LS R V
Sbjct: 122 ANKDALNHYREIFKDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVY 181
Query: 76 DFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYD--NGFFAPGRCSKAFGNCTVGNSAT 133
+FA ++ + F D V + T NEP VV LGY F PG S +
Sbjct: 182 EFARFSAYTAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLSFELSRRAM----- 236
Query: 134 EPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRSKADNYAAQRARDF 193
+N+I +HA A +GI+ ++PLT D A + A +
Sbjct: 237 ------YNIIQAHARAYDGIKSVSKKP----VGIIYANSSFQPLT--DKDMEAVEMAEND 284
Query: 194 HVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLK 253
+ WF I+ GE + + IV + L KG +D++G+N YT +
Sbjct: 285 NRWWFFDAIIRGEITRGNEKIVRDDL-----------KGRLDWIGVNYYTRTVV------ 327
Query: 254 QPKQVGYQQDWNAGFAYEKNGVPIG--PRANSYWLYNVPWGMYKALMYIKGHYGNPTVIL 311
+ + GY G E+N V + P ++ W + P G+Y L Y + + +
Sbjct: 328 KRTEKGYVSLGGYGHGCERNSVSLAGLPTSDFGWEF-FPEGLYDVLTKYWNRY-HLYMYV 385
Query: 312 SENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANVVGYFAWSLLDNFEWRLG 371
+ENG+ D D R Y ++ Q+ +A++ GA+V GY WSL DN+EW G
Sbjct: 386 TENGIADDA---------DYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADNYEWASG 436
Query: 372 YTSRFGIVYVDFTNLKRYPKMSAYWFKQL 400
++ RFG++ VD+ + Y + SA ++++
Sbjct: 437 FSMRFGLLKVDYNTKRLYWRPSALVYREI 465
>pdb|1UWI|A Chain A, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|B Chain B, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|C Chain C, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|D Chain D, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
Length = 489
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 169/389 (43%), Gaps = 59/389 (15%)
Query: 26 VNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKY----------NGLLSKRVVK 75
N + +Y ++ L RG+ N+YH+ LP L +G LS R V
Sbjct: 122 ANKDALNHYREIFKDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVY 181
Query: 76 DFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYD--NGFFAPGRCSKAFGNCTVGNSAT 133
+FA ++ + F D V + T NEP VV LGY F PG S +
Sbjct: 182 EFARFSAYTAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLSFELSRRAM----- 236
Query: 134 EPYIVAHNLILSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRSKADNYAAQRARDF 193
+N+I +HA A +GI+ ++PLT D A + A +
Sbjct: 237 ------YNIIQAHARAYDGIKSVSKKP----VGIIYANSSFQPLT--DKDMEAVEMAEND 284
Query: 194 HVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLK 253
+ WF I+ GE + + IV + L KG +D++G+N YT +
Sbjct: 285 NRWWFFDAIIRGEITRGNEKIVRDDL-----------KGRLDWIGVNYYTRTVV------ 327
Query: 254 QPKQVGYQQDWNAGFAYEKNGVPIG--PRANSYWLYNVPWGMYKALMYIKGHYGNPTVIL 311
+ GY G E+N V + P ++ W + P G+Y L Y + + +
Sbjct: 328 KRTGKGYVSLGGYGHGCERNSVSLAGLPTSDFGWEF-FPEGLYDVLTKYWNRY-HLYMYV 385
Query: 312 SENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANVVGYFAWSLLDNFEWRLG 371
+ENG+ D D R Y ++ Q+ +A++ GA+V GY WSL DN+EW G
Sbjct: 386 TENGIADDA---------DYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADNYEWASG 436
Query: 372 YTSRFGIVYVDFTNLKRYPKMSAYWFKQL 400
++ RFG++ VD+ + Y + S+ ++++
Sbjct: 437 FSMRFGLLKVDYNTKRLYWRPSSLVYREI 465
>pdb|1QVB|A Chain A, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
pdb|1QVB|B Chain B, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
Length = 481
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 170/442 (38%), Gaps = 86/442 (19%)
Query: 4 LNFDAYRFSISWSRIFPYGTGKV-----------------------------NWKGVAYY 34
L + R + WSRIFP T V N + V +Y
Sbjct: 72 LGVNTIRVGVEWSRIFPKPTFNVKVPVERDENGSIVHVDVDDKAVERLDELANKEAVNHY 131
Query: 35 NQLINYLLKRGITPYANLYHYDLPEAL-----------EKKYNGLLSKRVVKDFADYADF 83
++ ++RG NLYH+ LP L ++ +G L++ V +FA YA +
Sbjct: 132 VEMYKDWVERGRKLILNLYHWPLPLWLHNPIMVRRMGPDRAPSGWLNEESVVEFAKYAAY 191
Query: 84 CFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSKAFGNCTVGNSATEPYIVAHNLI 143
G+ W T NEP VV GY F G + + + A N+I
Sbjct: 192 IAWKMGELPVMWSTMNEPNVVYEQGY---MFVKGGFPPGYLSLEAADKAR------RNMI 242
Query: 144 LSHAAAVXXXXXXXXXXXXGRIGILLDFVWYEPLTRSKADNYAAQRARDFHVGWFIHPIV 203
+HA A +G++ F W+E L A+ + ++ +
Sbjct: 243 QAHARAYDNIKRFSKKP----VGLIYAFQWFE-LLEGPAEVFDKFKSSKLYY-------- 289
Query: 204 YGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQD 263
+IV E + + +D++G+N Y+ K GY
Sbjct: 290 -------FTDIVSKGSSIINVEYRRDLANRLDWLGVNYYSRLVYKIVDDKPIILHGY--- 339
Query: 264 WNAGFAYEKNGVPIGPRANSYWLYNV-PWGMYKALMYIKGHYGNPTVILSENGMDDPGNV 322
GF G+ S + + V P G+Y L + YG +I++ENG+ D
Sbjct: 340 ---GFLCTPGGISPAENPCSDFGWEVYPEGLYLLLKELYNRYGV-DLIVTENGVSDS--- 392
Query: 323 TLPKGLHDTTRINYYKGYLTQLKKAVDDGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVD 382
D R Y ++ + KA ++G V GY WSL DN+EW G+ +FG+V VD
Sbjct: 393 ------RDALRPAYLVSHVYSVWKAANEGIPVKGYLHWSLTDNYEWAQGFRQKFGLVMVD 446
Query: 383 FTNLKRYPKMSAYWFKQLLKRN 404
F KRY + SA F+++ N
Sbjct: 447 FKTKKRYLRPSALVFREIATHN 468
>pdb|3AOF|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a In Complex
With Mannotriose Substrate
pdb|3AOF|B Chain B, Crystal Structures Of Thermotoga Maritima Cel5a In Complex
With Mannotriose Substrate
Length = 317
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 6 FDAYRFSISWS-RIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDL----PEA 60
F R I WS + + K+ + +++IN LKRG+ N++HY+ PE
Sbjct: 47 FSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMNDPEE 106
Query: 61 LEKKYNGLLSKRVVKDFADYADFCF 85
++++ L K++ + DY + F
Sbjct: 107 HKERFLALW-KQIADRYKDYPETLF 130
>pdb|3AMG|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a In Complex
With Cellobiose Substrate, Mutant Form
pdb|3AMG|B Chain B, Crystal Structures Of Thermotoga Maritima Cel5a In Complex
With Cellobiose Substrate, Mutant Form
Length = 317
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 6 FDAYRFSISWS-RIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDL----PEA 60
F R I WS + + K+ + +++IN LKRG+ N++HY+ PE
Sbjct: 47 FSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMNDPEE 106
Query: 61 LEKKYNGLLSKRVVKDFADYADFCF 85
++++ L K++ + DY + F
Sbjct: 107 HKERFLALW-KQIADRYKDYPETLF 130
>pdb|3AZR|A Chain A, Diverse Substrates Recognition Mechanism Revealed By
Thermotoga Maritima Cel5a Structures In Complex With
Cellobiose
pdb|3AZR|B Chain B, Diverse Substrates Recognition Mechanism Revealed By
Thermotoga Maritima Cel5a Structures In Complex With
Cellobiose
pdb|3AZS|A Chain A, Diverse Substrates Recognition Mechanism Revealed By
Thermotoga Maritima Cel5a Structures In Complex With
Mannotriose
pdb|3AZS|B Chain B, Diverse Substrates Recognition Mechanism Revealed By
Thermotoga Maritima Cel5a Structures In Complex With
Mannotriose
pdb|3AZT|A Chain A, Diverse Substrates Recognition Mechanism Revealed By
Thermotoga Maritima Cel5a Structures In Complex With
Cellotetraose
pdb|3AZT|B Chain B, Diverse Substrates Recognition Mechanism Revealed By
Thermotoga Maritima Cel5a Structures In Complex With
Cellotetraose
pdb|3AZT|C Chain C, Diverse Substrates Recognition Mechanism Revealed By
Thermotoga Maritima Cel5a Structures In Complex With
Cellotetraose
pdb|3AZT|D Chain D, Diverse Substrates Recognition Mechanism Revealed By
Thermotoga Maritima Cel5a Structures In Complex With
Cellotetraose
Length = 317
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 6 FDAYRFSISWS-RIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDL----PEA 60
F R I WS + + K+ + +++IN LKRG+ N++HY+ PE
Sbjct: 47 FSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMNDPEE 106
Query: 61 LEKKYNGLLSKRVVKDFADYADFCF 85
++++ L K++ + DY + F
Sbjct: 107 HKERFLALW-KQIADRYKDYPETLF 130
>pdb|3MMU|A Chain A, Crystal Structure Of Endoglucanase Cel5a From The
Hyperthermophilic Thermotoga Maritima
pdb|3MMU|B Chain B, Crystal Structure Of Endoglucanase Cel5a From The
Hyperthermophilic Thermotoga Maritima
pdb|3MMU|C Chain C, Crystal Structure Of Endoglucanase Cel5a From The
Hyperthermophilic Thermotoga Maritima
pdb|3MMU|D Chain D, Crystal Structure Of Endoglucanase Cel5a From The
Hyperthermophilic Thermotoga Maritima
pdb|3MMU|E Chain E, Crystal Structure Of Endoglucanase Cel5a From The
Hyperthermophilic Thermotoga Maritima
pdb|3MMU|F Chain F, Crystal Structure Of Endoglucanase Cel5a From The
Hyperthermophilic Thermotoga Maritima
pdb|3MMU|G Chain G, Crystal Structure Of Endoglucanase Cel5a From The
Hyperthermophilic Thermotoga Maritima
pdb|3MMU|H Chain H, Crystal Structure Of Endoglucanase Cel5a From The
Hyperthermophilic Thermotoga Maritima
pdb|3MMW|A Chain A, Crystal Structure Of Endoglucanase Cel5a From The
Hyperthermophilic Thermotoga Maritima
pdb|3MMW|B Chain B, Crystal Structure Of Endoglucanase Cel5a From The
Hyperthermophilic Thermotoga Maritima
pdb|3MMW|C Chain C, Crystal Structure Of Endoglucanase Cel5a From The
Hyperthermophilic Thermotoga Maritima
pdb|3MMW|D Chain D, Crystal Structure Of Endoglucanase Cel5a From The
Hyperthermophilic Thermotoga Maritima
pdb|3AMC|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a, Apo Form
And DimerAU
pdb|3AMC|B Chain B, Crystal Structures Of Thermotoga Maritima Cel5a, Apo Form
And DimerAU
pdb|3AMD|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a, Apo Form
And TetramerAU
pdb|3AMD|B Chain B, Crystal Structures Of Thermotoga Maritima Cel5a, Apo Form
And TetramerAU
pdb|3AMD|C Chain C, Crystal Structures Of Thermotoga Maritima Cel5a, Apo Form
And TetramerAU
pdb|3AMD|D Chain D, Crystal Structures Of Thermotoga Maritima Cel5a, Apo Form
And TetramerAU
Length = 317
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 6 FDAYRFSISWS-RIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDL----PEA 60
F R I WS + + K+ + +++IN LKRG+ N++HY+ PE
Sbjct: 47 FSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMNDPEE 106
Query: 61 LEKKYNGLLSKRVVKDFADYADFCF 85
++++ L K++ + DY + F
Sbjct: 107 HKERFLALW-KQIADRYKDYPETLF 130
>pdb|1K25|A Chain A, Pbp2x From A Highly Penicillin-Resistant Streptococcus
Pneumoniae Clinical Isolate
pdb|1K25|B Chain B, Pbp2x From A Highly Penicillin-Resistant Streptococcus
Pneumoniae Clinical Isolate
pdb|1K25|C Chain C, Pbp2x From A Highly Penicillin-Resistant Streptococcus
Pneumoniae Clinical Isolate
pdb|1K25|D Chain D, Pbp2x From A Highly Penicillin-Resistant Streptococcus
Pneumoniae Clinical Isolate
Length = 685
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 267 GFAYEKNGVPIGPRANSYWLYNVPWGMYKA 296
G Y++NGVPI A SY +Y V YK+
Sbjct: 12 GTIYDRNGVPIAEDATSYNVYAVIDKKYKS 41
>pdb|2Z2L|A Chain A, Penicillin-Binding Protein 2x (Pbp2x) From Streptococcus
Pneumoniae
pdb|2Z2L|D Chain D, Penicillin-Binding Protein 2x (Pbp2x) From Streptococcus
Pneumoniae
pdb|2Z2M|A Chain A, Cefditoren-Acylated Penicillin-Binding Protein 2x (Pbp2x)
From Streptococcus Pneumoniae
pdb|2Z2M|D Chain D, Cefditoren-Acylated Penicillin-Binding Protein 2x (Pbp2x)
From Streptococcus Pneumoniae
pdb|2ZC3|A Chain A, Penicillin-Binding Protein 2x (Pbp 2x) Acyl-Enzyme Complex
(Biapenem) From Streptococcus Pneumoniae
pdb|2ZC3|D Chain D, Penicillin-Binding Protein 2x (Pbp 2x) Acyl-Enzyme Complex
(Biapenem) From Streptococcus Pneumoniae
pdb|2ZC4|A Chain A, Penicillin-Binding Protein 2x (Pbp 2x) Acyl-Enzyme Complex
(Tebipenem) From Streptococcus Pneumoniae
pdb|2ZC4|D Chain D, Penicillin-Binding Protein 2x (Pbp 2x) Acyl-Enzyme Complex
(Tebipenem) From Streptococcus Pneumoniae
Length = 168
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 267 GFAYEKNGVPIGPRANSYWLYNVPWGMYKA 296
G Y++NGVPI A SY +Y V YK+
Sbjct: 7 GTIYDRNGVPIAEDATSYNVYAVIDENYKS 36
>pdb|1RP5|A Chain A, Pbp2x From Streptococcus Pneumoniae Strain 5259 With
Reduced Susceptibility To Beta-Lactam Antibiotics
pdb|1RP5|B Chain B, Pbp2x From Streptococcus Pneumoniae Strain 5259 With
Reduced Susceptibility To Beta-Lactam Antibiotics
Length = 702
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 267 GFAYEKNGVPIGPRANSYWLYNVPWGMYKA 296
G Y++NGVPI A SY +Y V YK+
Sbjct: 29 GTIYDRNGVPIAEDATSYNVYAVIDENYKS 58
>pdb|1PMD|A Chain A, Penicillin-Binding Protein 2x (Pbp-2x)
Length = 675
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 267 GFAYEKNGVPIGPRANSYWLYNVPWGMYKA 296
G Y++NGVPI A SY +Y V YK+
Sbjct: 2 GTIYDRNGVPIAEDATSYNVYAVIDENYKS 31
>pdb|1QME|A Chain A, Penicillin-binding Protein 2x (pbp-2x)
pdb|1QMF|A Chain A, Penicillin-Binding Protein 2x (Pbp-2x) Acyl-Enzyme Complex
Length = 702
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 267 GFAYEKNGVPIGPRANSYWLYNVPWGMYKA 296
G Y++NGVPI A SY +Y V YK+
Sbjct: 29 GTIYDRNGVPIAEDATSYNVYAVIDENYKS 58
>pdb|1PYY|A Chain A, Double Mutant Pbp2x T338aM339F FROM STREPTOCOCCUS
PNEUMONIAE STRAIN R6 At 2.4 A Resolution
Length = 702
Score = 28.5 bits (62), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 267 GFAYEKNGVPIGPRANSYWLYNVPWGMYKA 296
G Y++NGVPI A SY +Y V YK+
Sbjct: 29 GTIYDRNGVPIAEDATSYNVYAVIDENYKS 58
>pdb|2KRR|A Chain A, Solution Structure Of The Rbd1,2 Domains From Human
Nucleoli
Length = 180
Score = 28.1 bits (61), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 327 GLHDTTRINYYKGYLTQLKKAVDDGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFTNL 386
G TT N + G L K A + + FA + L + R+G T +FG YVDF +
Sbjct: 1 GTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAKNDLAVVDVRIGMTRKFG--YVDFESA 58
Query: 387 KRYPK 391
+ K
Sbjct: 59 EDLEK 63
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.140 0.454
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,038,023
Number of Sequences: 62578
Number of extensions: 647595
Number of successful extensions: 1690
Number of sequences better than 100.0: 85
Number of HSP's better than 100.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1279
Number of HSP's gapped (non-prelim): 100
length of query: 406
length of database: 14,973,337
effective HSP length: 101
effective length of query: 305
effective length of database: 8,652,959
effective search space: 2639152495
effective search space used: 2639152495
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)