BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015450
(406 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255554923|ref|XP_002518499.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542344|gb|EEF43886.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 430
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 267/326 (81%), Positives = 292/326 (89%), Gaps = 8/326 (2%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMDE Y+N+CFAHTGEV +VKVIRNKQTGQ+EGYGFIEF S AER+
Sbjct: 87 EVRTLWIGDLQYWMDENYINSCFAHTGEVTSVKVIRNKQTGQVEGYGFIEFGSHGTAERI 146
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NGTPMPNGEQNFRLNWASF G+KRDDTPD TIFVGDLAADVTDY+LQ+TFR YP
Sbjct: 147 LQTYNGTPMPNGEQNFRLNWASFSGGDKRDDTPDFTIFVGDLAADVTDYILQDTFRVHYP 206
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS- 258
S KGAKVVIDRLTGRTKGYGFVRFGDESEQ+RAMT+MNG FCSTRPMRIG ATNK V+
Sbjct: 207 SVKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMTDMNGAFCSTRPMRIGLATNKNAVTG 266
Query: 259 -----ASYQNSQV-AQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 312
ASYQNSQ ++++DPNNTT+FVGNLDS VTD++LRELF +YGQL+HVKIPAGKR
Sbjct: 267 QQYPKASYQNSQTQGENENDPNNTTIFVGNLDSNVTDDNLRELFGRYGQLLHVKIPAGKR 326
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGY 372
CGFVQFADRSCAEEALR+LNGT L GQ+IRLSWGRSPSNKQ QPD NQWNAGYYGYAQGY
Sbjct: 327 CGFVQFADRSCAEEALRLLNGTSLSGQSIRLSWGRSPSNKQPQPDANQWNAGYYGYAQGY 386
Query: 373 ENYGYAAAAPQDPSMYYGGYPGYGNY 398
ENYGY A APQDP+MYYG YPGYGNY
Sbjct: 387 ENYGY-APAPQDPNMYYGNYPGYGNY 411
>gi|356563290|ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 402
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 269/362 (74%), Positives = 293/362 (80%), Gaps = 26/362 (7%)
Query: 48 PQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE 107
P AQPP+ +V P Q E+RTLWIGDLQYWMDE YL TCFAHTGE
Sbjct: 44 PSAQPPSQ-------------SVAPPQPTSADEVRTLWIGDLQYWMDENYLYTCFAHTGE 90
Query: 108 VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEK 167
+ +VKVIRNKQT Q EGYGFIEF SRAGAERVLQT+NGT MPNG QNFRLNWA+F AGE+
Sbjct: 91 LASVKVIRNKQTSQSEGYGFIEFTSRAGAERVLQTYNGTIMPNGGQNFRLNWATFSAGER 150
Query: 168 R-DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDE 226
R DD+PDHTIFVGDLAADVTDY+LQETFRARYPS KGAKVVIDRLTGRTKGYGFVRFGDE
Sbjct: 151 RHDDSPDHTIFVGDLAADVTDYLLQETFRARYPSAKGAKVVIDRLTGRTKGYGFVRFGDE 210
Query: 227 SEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS-----ASYQNSQVAQSDDDPNNTTVFVG 281
SEQ+RAM+EM GV CSTRPMRIGPA+NK + ASYQN Q AQ++ DPNNTT+FVG
Sbjct: 211 SEQVRAMSEMQGVLCSTRPMRIGPASNKNPSTQSQPKASYQNPQGAQNEHDPNNTTIFVG 270
Query: 282 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
NLD VTD+HLR++F QYG+LVHVKIPAGKRCGFVQFADRSCAEEALR+LNGT LGGQN+
Sbjct: 271 NLDPNVTDDHLRQVFGQYGELVHVKIPAGKRCGFVQFADRSCAEEALRVLNGTLLGGQNV 330
Query: 342 RLSWGRSPSNKQAQPDPNQWN-----AGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYG 396
RLSWGRSPSNKQAQPD NQWN Y GYENYGYA A QDP+M YG YPGY
Sbjct: 331 RLSWGRSPSNKQAQPDANQWNGSGGGGYYGYAQGGYENYGYAPAG-QDPNM-YGSYPGYA 388
Query: 397 NY 398
NY
Sbjct: 389 NY 390
>gi|356521983|ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 397
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 268/353 (75%), Positives = 289/353 (81%), Gaps = 15/353 (4%)
Query: 56 WATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIR 115
WAT A P + V P Q E+RTLWIGDLQYWMDE YL TC AHTGEV +VKVIR
Sbjct: 38 WATSAQPPSQS---VAPPQPTSADEVRTLWIGDLQYWMDENYLYTCLAHTGEVASVKVIR 94
Query: 116 NKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDH 174
NKQT Q EGYGFIEF SRAGAERVLQT+NGT MPNG QNFRLNWA+ AGE+R DD+PDH
Sbjct: 95 NKQTSQSEGYGFIEFTSRAGAERVLQTYNGTIMPNGGQNFRLNWATLSAGERRHDDSPDH 154
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
TIFVGDLAADVTDY+LQETFRARYPS KGAKVVIDRLTGRTKGYGFVRFGDESEQ+RAMT
Sbjct: 155 TIFVGDLAADVTDYLLQETFRARYPSIKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMT 214
Query: 235 EMNGVFCSTRPMRIGPATNKKTVS-----ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTD 289
EM GV CSTRPMRIGPA+NK + ASYQN Q AQ++ DPNNTT+FVGNLD VTD
Sbjct: 215 EMQGVLCSTRPMRIGPASNKNPSTQSQPKASYQNPQGAQNEHDPNNTTIFVGNLDPNVTD 274
Query: 290 EHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP 349
+HLR++F YG+LVHVKIPAGKRCGFVQFADRSCAEEALR+LNGT LGGQN+RLSWGRSP
Sbjct: 275 DHLRQVFGHYGELVHVKIPAGKRCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSP 334
Query: 350 SNKQAQPDPNQWN----AGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNY 398
SNKQAQPD NQWN Y GYENYGYA A QDP+M YG YPGY NY
Sbjct: 335 SNKQAQPDANQWNGSGGGYYGYAQGGYENYGYAPAG-QDPNM-YGSYPGYANY 385
>gi|356555656|ref|XP_003546146.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 411
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 274/378 (72%), Positives = 302/378 (79%), Gaps = 28/378 (7%)
Query: 42 MMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTC 101
+MMPPQ QA P MWA A P PQQ E+RTLWIGDLQYWMDE YL TC
Sbjct: 35 VMMPPQHQA-PQPMWAPSAQPPL-------PQQPASADEVRTLWIGDLQYWMDENYLYTC 86
Query: 102 FAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS 161
FAHTGEV +VKVIRNKQT Q EGYGFIEF SRAGAER+LQT+NG MPNG Q+FRLNWA+
Sbjct: 87 FAHTGEVSSVKVIRNKQTSQSEGYGFIEFNSRAGAERILQTYNGAIMPNGGQSFRLNWAT 146
Query: 162 FGAGEK--RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYG 219
F AGE+ +DD+PD+TIFVGDLAADVTDY+LQETFRARY S KGAKVVIDRLTGRTKGYG
Sbjct: 147 FSAGERSRQDDSPDYTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYG 206
Query: 220 FVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS-----ASYQNSQ--VAQSDDD 272
FVRF +ESEQ+RAMTEM GV CSTRPMRIGPA+NK + ASY NSQ +Q+++D
Sbjct: 207 FVRFSEESEQMRAMTEMQGVLCSTRPMRIGPASNKTPATQSQPKASYLNSQPQGSQNEND 266
Query: 273 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLN 332
PNNTT+FVGNLD VTD+HLR++FSQYG+LVHVKIPAGKRCGFVQFADRSCAEEALR+LN
Sbjct: 267 PNNTTIFVGNLDPNVTDDHLRQVFSQYGELVHVKIPAGKRCGFVQFADRSCAEEALRVLN 326
Query: 333 GTQLGGQNIRLSWGRSPSNKQAQPDPNQWN---------AGYYGYAQGYENYGYAAAAPQ 383
GT LGGQN+RLSWGRSPSNKQAQ DPNQWN Y AQGYENYGYA A Q
Sbjct: 327 GTLLGGQNVRLSWGRSPSNKQAQADPNQWNGAAGAGSGGGYYGYAAQGYENYGYAPAG-Q 385
Query: 384 DPSMYYGGYPGYGNYQQP 401
DP+M YG YPGY YQ P
Sbjct: 386 DPNM-YGSYPGYPGYQAP 402
>gi|357480263|ref|XP_003610417.1| RNA-binding protein [Medicago truncatula]
gi|355511472|gb|AES92614.1| RNA-binding protein [Medicago truncatula]
Length = 411
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 273/374 (72%), Positives = 305/374 (81%), Gaps = 19/374 (5%)
Query: 39 PYMMM----MPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMD 94
PYMMM PQPQ QPP MWA A PQ + AVPP E++TLWIGDLQYWMD
Sbjct: 31 PYMMMHPPQPQPQPQTQPPQMWAPNAQPPQQS--AVPPPSSAD--EVKTLWIGDLQYWMD 86
Query: 95 ETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQN 154
E YL CF+HTGEV +VKVIRNKQT Q EGYGF+EFISRAGAERVLQTFNGT MPNG QN
Sbjct: 87 ENYLYNCFSHTGEVGSVKVIRNKQTNQSEGYGFLEFISRAGAERVLQTFNGTIMPNGGQN 146
Query: 155 FRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTG 213
FRLNWA+F +GEKR DD+PD+TIFVGDLAADV+D+ L E FR RY S KGAKVVIDR TG
Sbjct: 147 FRLNWATFSSGEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTG 206
Query: 214 RTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----KTVSASYQNSQV-AQ 268
RTKGYGFVRF DESEQ+RAMTEM GV CSTRPMRIGPA+NK +T ASYQN Q AQ
Sbjct: 207 RTKGYGFVRFADESEQMRAMTEMQGVLCSTRPMRIGPASNKNLGTQTSKASYQNPQGGAQ 266
Query: 269 SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEAL 328
+++DPNNTT+FVGNLD VTDEHL+++F+QYG+LVHVKIP+GKRCGFVQFADRS AEEAL
Sbjct: 267 NENDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADRSSAEEAL 326
Query: 329 RMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWN--AGYY-GYAQGYENYGYAAAAPQDP 385
R+LNGT LGGQN+RLSWGRSP+NKQ Q DPNQWN + Y+ GYAQGYENY YA A QDP
Sbjct: 327 RVLNGTLLGGQNVRLSWGRSPANKQTQQDPNQWNGSSSYFGGYAQGYENYAYAPPAGQDP 386
Query: 386 SMYYGGYP-GYGNY 398
+M YG YP GY +Y
Sbjct: 387 NM-YGSYPAGYASY 399
>gi|388507756|gb|AFK41944.1| unknown [Medicago truncatula]
Length = 411
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 273/374 (72%), Positives = 304/374 (81%), Gaps = 19/374 (5%)
Query: 39 PYMMM----MPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMD 94
PYMMM PQPQ QPP MWA A PQ + AVPP E+ TLWIGDLQYWMD
Sbjct: 31 PYMMMHPPQPQPQPQTQPPQMWAPNAQPPQQS--AVPPPSSAD--EVETLWIGDLQYWMD 86
Query: 95 ETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQN 154
E YL CF+HTGEV +VKVIRNKQT Q EGYGF+EFISRAGAERVLQTFNGT MPNG QN
Sbjct: 87 ENYLYNCFSHTGEVGSVKVIRNKQTNQSEGYGFLEFISRAGAERVLQTFNGTIMPNGGQN 146
Query: 155 FRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTG 213
FRLNWA+F +GEKR DD+PD+TIFVGDLAADV+D+ L E FR RY S KGAKVVIDR TG
Sbjct: 147 FRLNWATFSSGEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTG 206
Query: 214 RTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----KTVSASYQNSQV-AQ 268
RTKGYGFVRF DESEQ+RAMTEM GV CSTRPMRIGPA+NK +T ASYQN Q AQ
Sbjct: 207 RTKGYGFVRFADESEQMRAMTEMQGVLCSTRPMRIGPASNKNLGTQTSKASYQNPQGGAQ 266
Query: 269 SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEAL 328
+++DPNNTT+FVGNLD VTDEHL+++F+QYG+LVHVKIP+GKRCGFVQFADRS AEEAL
Sbjct: 267 NENDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADRSSAEEAL 326
Query: 329 RMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWN--AGYY-GYAQGYENYGYAAAAPQDP 385
R+LNGT LGGQN+RLSWGRSP+NKQ Q DPNQWN + Y+ GYAQGYENY YA A QDP
Sbjct: 327 RVLNGTLLGGQNVRLSWGRSPANKQTQQDPNQWNGSSSYFGGYAQGYENYAYAPPAGQDP 386
Query: 386 SMYYGGYP-GYGNY 398
+M YG YP GY +Y
Sbjct: 387 NM-YGSYPAGYASY 399
>gi|356548971|ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 409
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 268/363 (73%), Positives = 294/363 (80%), Gaps = 24/363 (6%)
Query: 42 MMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTC 101
+MMPPQ QA P AMWA A P A E+RTLWIGDLQYWMDE YL TC
Sbjct: 34 VMMPPQAQA-PQAMWAPSAQPPPQQQPA-------SADEVRTLWIGDLQYWMDENYLYTC 85
Query: 102 FAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS 161
FAHTGEV +VKVIRNKQT Q EGYGFIEF SRAGAER+LQT+NG MPNG Q+FRLNWA+
Sbjct: 86 FAHTGEVTSVKVIRNKQTSQSEGYGFIEFNSRAGAERILQTYNGAIMPNGGQSFRLNWAT 145
Query: 162 FGAGEK--RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYG 219
F AGE+ DD+PD+TIFVGDLAADVTDY+LQETFRARY S KGAKVVIDRLTGRTKGYG
Sbjct: 146 FSAGERSRHDDSPDYTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYG 205
Query: 220 FVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS-----ASYQNSQ--VAQSDDD 272
FVRF DESEQ+RAMTEM GV CSTRPMRIGPA+NK + ASYQNSQ +Q+++D
Sbjct: 206 FVRFSDESEQVRAMTEMQGVLCSTRPMRIGPASNKTPTTQSQPKASYQNSQPQGSQNEND 265
Query: 273 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLN 332
PNNTT+FVGNLD VTD+HLR++FSQYG+LVHVKIPAGKRCGFVQFADRSCAEEALR+LN
Sbjct: 266 PNNTTIFVGNLDPNVTDDHLRQVFSQYGELVHVKIPAGKRCGFVQFADRSCAEEALRVLN 325
Query: 333 GTQLGGQNIRLSWGRSPSNKQAQPDPNQWN-------AGYYGYAQGYENYGYAAAAPQDP 385
GT LGGQN+RLSWGRSPSNKQAQ DPNQWN Y AQGYENYGYA AA QDP
Sbjct: 326 GTLLGGQNVRLSWGRSPSNKQAQADPNQWNGGAGSGGGYYGYAAQGYENYGYAPAAGQDP 385
Query: 386 SMY 388
+MY
Sbjct: 386 NMY 388
>gi|84468322|dbj|BAE71244.1| putative DNA binding protein [Trifolium pratense]
Length = 402
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 274/416 (65%), Positives = 306/416 (73%), Gaps = 41/416 (9%)
Query: 3 QPAPGAVPPPPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAA 62
QP G PP QY QAPPQQ PY+MM P PQA +WA A
Sbjct: 1 QPGHGIAPPNIGQQPPQQYH---QAPPQQ-------PYVMMPPQAPQA----LWAQSAQ- 45
Query: 63 PQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQI 122
PPQQ E+RTLWIGDLQYWMDE YL TCF +TGEV +VKVIRNKQT Q
Sbjct: 46 --------PPQQPASADEVRTLWIGDLQYWMDENYLYTCFGNTGEVTSVKVIRNKQTSQS 97
Query: 123 EGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEK---RDDTPDHTIFVG 179
EGYGFIEF +RA AERVLQT+ G MPNG Q++RLNWA+F AGE+ +DD PDHTIFVG
Sbjct: 98 EGYGFIEFNTRASAERVLQTYQGAIMPNGGQSYRLNWATFSAGERSSRQDDGPDHTIFVG 157
Query: 180 DLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV 239
DLAADVTDY+LQETFRARY S KGAKVVIDRLTGR+KGYGFVRF DE EQ+RAMTEM GV
Sbjct: 158 DLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRSKGYGFVRFADEGEQMRAMTEMQGV 217
Query: 240 FCSTRPMRIGPATNKKTVS-----ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
CSTRPMRIGPATNK + ASY N+ QS++DPNNTT+FVGNLD VTD+HLR+
Sbjct: 218 LCSTRPMRIGPATNKNPAATTQAKASYSNTPGGQSENDPNNTTIFVGNLDPNVTDDHLRQ 277
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 354
+FSQYG+LVHVKIP+GKRCGFVQF+DRS AEEA+R+LNGT LGGQN+RLSWGR+PSNKQ
Sbjct: 278 VFSQYGELVHVKIPSGKRCGFVQFSDRSSAEEAIRVLNGTLLGGQNVRLSWGRTPSNKQT 337
Query: 355 QPDPNQWN--------AGYYGYAQGYENYGYAAA-APQDPSMYYGGYPGYGNYQQP 401
Q DPNQWN Y GYENYGYAAA A QDP++ YG YPGY YQ P
Sbjct: 338 QQDPNQWNAAAAGGGGGYYGYPQGGYENYGYAAAPAGQDPNV-YGSYPGYAGYQHP 392
>gi|147859325|emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
Length = 410
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 256/331 (77%), Positives = 284/331 (85%), Gaps = 2/331 (0%)
Query: 74 QQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISR 133
Q P EIR+LWIGDLQ WM+E Y CF+ TGEVV+VKVIRNKQTGQ EGYGFIE +R
Sbjct: 67 QASNPEEIRSLWIGDLQPWMEENYXWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELATR 126
Query: 134 AGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQE 192
A AER+LQT+NGT MPN EQNFRLNWA+ GAGE+R DDTPD+TIFVGDLA+DVTDY+LQE
Sbjct: 127 AAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQE 186
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
TFR YPS KGAKVV DR TGR+KGYGFVRFGDE EQLRAM EMNG+FCSTRPMRIGPA
Sbjct: 187 TFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGPAA 246
Query: 253 NKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 312
KK V AS+QN+Q Q + DPNNTT+FVG LDS VTD++LR++FSQYG+LVHVKIP GKR
Sbjct: 247 TKKPVGASFQNTQGXQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKR 306
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGY 372
CGFVQFA+R+CAE+AL LNGTQLG Q+IRLSWGRSPSNKQAQPD QWN GYYGYAQGY
Sbjct: 307 CGFVQFANRACAEQALAGLNGTQLGAQSIRLSWGRSPSNKQAQPDQAQWNGGYYGYAQGY 366
Query: 373 ENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQ 403
E YGY A PQDP+MYYG YPGYGNYQQPQQ
Sbjct: 367 EAYGY-APPPQDPNMYYGAYPGYGNYQQPQQ 396
>gi|365192966|gb|AEW68341.1| putative nuclear acid binding protein [Medicago sativa]
Length = 409
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 269/372 (72%), Positives = 303/372 (81%), Gaps = 17/372 (4%)
Query: 39 PYMMM--MPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDET 96
PYMMM PQPQ QPP MWA PQ + AVPP E++TLWIGDLQYWMDE
Sbjct: 31 PYMMMHPPQPQPQTQPPQMWAPNTQPPQQS--AVPPPTSAD--EVKTLWIGDLQYWMDEN 86
Query: 97 YLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFR 156
YL CF+HTGEV +VKVIRNK Q EGYGF+EFISRAGAERVLQT+NGT MPNG QNFR
Sbjct: 87 YLYNCFSHTGEVGSVKVIRNKLNNQSEGYGFLEFISRAGAERVLQTYNGTIMPNGGQNFR 146
Query: 157 LNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRT 215
LNWA+F +GEKR DD+PD+TIFVGDLAADV+D+ L E FR RY S KGAKVVIDR TGR+
Sbjct: 147 LNWATFSSGEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRNTGRS 206
Query: 216 KGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----KTVSASYQNSQV-AQSD 270
KGYGFVRF DESEQ+RAMTEM GV CSTRPMRIGPA+NK +T ASYQN Q AQ++
Sbjct: 207 KGYGFVRFADESEQMRAMTEMQGVLCSTRPMRIGPASNKNLGTQTSKASYQNPQGGAQNE 266
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRM 330
+DPNNTT+FVGNLD VTDEHL+++F+QYG+LVHVKIP+GKRCGFVQFADRS AEEALR+
Sbjct: 267 NDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADRSSAEEALRV 326
Query: 331 LNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWN--AGYY-GYAQGYENYGYAAAAPQDPSM 387
LNGT LGGQN+RLSWGRSP+NKQ Q DPNQWN +GY+ GYAQGYENY YA A QDP+M
Sbjct: 327 LNGTLLGGQNVRLSWGRSPANKQTQQDPNQWNGSSGYFGGYAQGYENYAYAPPAGQDPNM 386
Query: 388 YYGGYP-GYGNY 398
YG YP GY +Y
Sbjct: 387 -YGSYPAGYASY 397
>gi|225461001|ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Vitis vinifera]
Length = 417
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 260/343 (75%), Positives = 288/343 (83%), Gaps = 10/343 (2%)
Query: 68 VAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGF 127
VA P Q P EIR+LWIGDLQ WM+E YL CF+ TGEVV+VKVIRNKQTGQ EGYGF
Sbjct: 78 VAAP--QASNPEEIRSLWIGDLQPWMEENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGF 135
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVT 186
IE +RA AER+LQT+NGT MPN EQNFRLNWA+ GAGE+R DDTPD+TIFVGDLA+DVT
Sbjct: 136 IELATRAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVT 195
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
DY+LQETFR YPS KGAKVV DR TGR+KGYGFVRFGDE EQLRAM EMNG+FCSTRPM
Sbjct: 196 DYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPM 255
Query: 247 RIGPATNKKTV------SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 300
RIGPA KK V AS+QN+Q Q + DPNNTT+FVG LDS VTD++LR++FSQYG
Sbjct: 256 RIGPAATKKPVGGQQFQKASFQNTQGNQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYG 315
Query: 301 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ 360
+LVHVKIP GKRCGFVQFA+R+CAE+AL LNGTQLG Q+IRLSWGRSPSNKQAQPD Q
Sbjct: 316 ELVHVKIPVGKRCGFVQFANRACAEQALAGLNGTQLGAQSIRLSWGRSPSNKQAQPDQAQ 375
Query: 361 WNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQ 403
WN GYYGYAQGYE YGY A PQDP+MYYG YPGYGNYQQPQQ
Sbjct: 376 WNGGYYGYAQGYEAYGY-APPPQDPNMYYGAYPGYGNYQQPQQ 417
>gi|224078632|ref|XP_002305583.1| predicted protein [Populus trichocarpa]
gi|222848547|gb|EEE86094.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/352 (73%), Positives = 279/352 (79%), Gaps = 13/352 (3%)
Query: 47 QPQAQPPAMWA----TQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF 102
Q Q PP MWA QA+ P Q E+RTLWIGDLQYWMDE Y+ +CF
Sbjct: 11 QTQPPPPHMWAQHQAHQASIPPPQQQQGQGQPPATADEVRTLWIGDLQYWMDENYIASCF 70
Query: 103 AHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF 162
AHTGEV +VK+IRNKQT QIEGYGFIE S AER+LQT+NGTPMPNGEQNFRLNWASF
Sbjct: 71 AHTGEVASVKIIRNKQTSQIEGYGFIEMTSHGAAERILQTYNGTPMPNGEQNFRLNWASF 130
Query: 163 GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVR 222
G+KRDD+PD TIFVGDLAADVTD+MLQETFRA +PS KGAKVVIDRLTGRTKGYGFVR
Sbjct: 131 SGGDKRDDSPDFTIFVGDLAADVTDFMLQETFRAHFPSVKGAKVVIDRLTGRTKGYGFVR 190
Query: 223 FGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV------SASYQNSQVAQSDDDPNNT 276
FGDESEQLRAMTEMNG FCSTRPMR+G A+NKK V ASYQN Q Q+D DPNNT
Sbjct: 191 FGDESEQLRAMTEMNGAFCSTRPMRVGLASNKKAVVGQQYPKASYQNPQ-PQNDGDPNNT 249
Query: 277 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQL 336
T+FVGNLDS V D+HL+ELF QYGQL+HVKIPAGKRCGFVQFADRS AEEAL+MLNG QL
Sbjct: 250 TIFVGNLDSNVMDDHLKELFGQYGQLLHVKIPAGKRCGFVQFADRSSAEEALKMLNGAQL 309
Query: 337 GGQNIRLSWGRSPSNKQAQPDPN-QWNAGYYGYAQGYENYGYAAAAPQDPSM 387
GQNIRLSWGR+PSNKQAQPD N Y QGYENYGYA A QDP+M
Sbjct: 310 SGQNIRLSWGRNPSNKQAQPDANQYGGGYYGYGQQGYENYGYAPAT-QDPNM 360
>gi|449454734|ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 404
Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust.
Identities = 254/325 (78%), Positives = 279/325 (85%), Gaps = 11/325 (3%)
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
P Q E+RTLWIGDLQYWMDE Y+ CFAHTGEV +VKVIRNKQTGQ EGYGFIEF+
Sbjct: 56 PPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFL 115
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYML 190
+R AERVLQT+NGT MPNG QNFRLNWAS AGEKR DD+PD+TIFVGDLA DVTDY+L
Sbjct: 116 TRPAAERVLQTYNGTAMPNGAQNFRLNWAS--AGEKRQDDSPDYTIFVGDLAGDVTDYVL 173
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
QETFRARY S KGAKVVIDRLTGRTKGYGFV+FGDESEQ+RAMTEMNGV CS+RPMRIGP
Sbjct: 174 QETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGP 233
Query: 251 ATNKKTV------SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 304
A NK T SYQN Q AQ+++DPNNTT+FVGNLD+ VTDEHLR++F QYG+LVH
Sbjct: 234 AANKNTSGGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVH 293
Query: 305 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWN-A 363
VKIP GKRCGFVQFADR+CAEEALR+LNGTQ+GGQNIRLSWGRSPSNKQ Q DPNQWN
Sbjct: 294 VKIPVGKRCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGG 353
Query: 364 GYYGYAQGYENYGYAAAAPQDPSMY 388
GYYGY QGYENY Y A APQDP+M+
Sbjct: 354 GYYGYGQGYENYSY-APAPQDPNMF 377
>gi|449454730|ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
gi|449472157|ref|XP_004153511.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
Length = 408
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 272/359 (75%), Positives = 297/359 (82%), Gaps = 18/359 (5%)
Query: 63 PQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQI 122
PQA P Q E+RTLWIGDLQYWMDE Y+ CFAHTGEV +VKVIRNKQTGQ
Sbjct: 47 PQAGSPQGQPPQPANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQS 106
Query: 123 EGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDL 181
EGYGFIEF++R AERVLQT+NGT MPNG QNFRLNWAS AGEKR DD+PD+TIFVGDL
Sbjct: 107 EGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWAS--AGEKRQDDSPDYTIFVGDL 164
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
A DVTDY+LQETFRARY S KGAKVVIDRLTGRTKGYGFV+FGDESEQ+RAMTEMNGV C
Sbjct: 165 AGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHC 224
Query: 242 STRPMRIGPATNKKTVSA------SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 295
S+RPMRIGPA NK T + SYQN Q+++DPNNTT+FVGNLDS VTDEHLR++
Sbjct: 225 SSRPMRIGPAANKNTSGSQQFSKTSYQNPPGTQNENDPNNTTIFVGNLDSNVTDEHLRQV 284
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
FSQYG+LVHVKIPAGKRCGFVQF+DRSCAEEALR+LNGT +GGQNIRLSWGRSPSNKQ Q
Sbjct: 285 FSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRILNGTPIGGQNIRLSWGRSPSNKQPQ 344
Query: 356 PDPNQWN------AGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQP--QQPQQ 406
DPNQWN GYYGY QGYENY YA AA QDP+M+Y GY GYGNYQQP QQP Q
Sbjct: 345 ADPNQWNGGGGGGGGYYGYGQGYENYSYAPAA-QDPNMFYSGYGGYGNYQQPATQQPSQ 402
>gi|297844004|ref|XP_002889883.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
gi|297335725|gb|EFH66142.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 258/393 (65%), Positives = 291/393 (74%), Gaps = 33/393 (8%)
Query: 1 MMQPAPGAVPP--PPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWAT 58
M QP PG + P PPP A QY YQQ PSPY + P PP MW
Sbjct: 2 MQQPPPGGILPHHAPPPSAQQQYGYQQ-----------PSPYGIAGAAPP---PPQMWNP 47
Query: 59 QAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ 118
QAAAP P Q EIRTLWIGDLQYWMDE +L CFAHTGE+V+ KVIRNKQ
Sbjct: 48 QAAAP-------PSAQPMTVDEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQ 100
Query: 119 TGQIEGYGFIEFISRAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTPDHTIF 177
TGQ+EGYGFIEF S A AERVLQTFN P+P+ +Q FRLNWAS +G+KRDD+PD+TIF
Sbjct: 101 TGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDSPDYTIF 160
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDLAADVTDY+L ETFRA YPS KGAKVVIDR TGRTKGYGFVRF DESEQ+RAMTEMN
Sbjct: 161 VGDLAADVTDYILLETFRASYPSVKGAKVVIDRATGRTKGYGFVRFSDESEQIRAMTEMN 220
Query: 238 GVFCSTRPMRIGPATNKKTVSASYQNSQVAQ----SDDDPNNTTVFVGNLDSIVTDEHLR 293
GV CSTRPMRIGPA +KK V+ + Q A +D+DPNNTTVFVG LD VTD+HL+
Sbjct: 221 GVPCSTRPMRIGPAASKKGVTGQRDSYQSAAGGVPTDNDPNNTTVFVGGLDQSVTDDHLK 280
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
+F QYG++VHVKIPAGKRCGFVQF+++SCAEEALRMLNG QLGG +RLSWGRSPSNKQ
Sbjct: 281 NVFGQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQ 340
Query: 354 AQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPS 386
+ DP+Q+ G GY QG E YGY PQDP+
Sbjct: 341 SA-DPSQFYYG--GYGQGQEQYGY--TMPQDPN 368
>gi|75334880|sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding protein RBP45;
Short=Poly(A)-binding protein RBP45; AltName:
Full=RNA-binding protein 45; Short=NplRBP45
gi|9663767|emb|CAC01237.1| RNA Binding Protein 45 [Nicotiana plumbaginifolia]
Length = 409
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 240/357 (67%), Positives = 274/357 (76%), Gaps = 11/357 (3%)
Query: 56 WATQAAAPQAAGVAVP---PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
WA Q + Q +A P G P E+R+LWIGDLQYWMDE YL+TCF HTGE+V+ K
Sbjct: 55 WAQQPSQQQYGAMATTNPNPSPTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAK 114
Query: 113 VIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTP 172
VIRNKQTGQ EGYGF+EF S A AE +LQT+NGT MPN EQNFR+NWAS GAGE+RDD+
Sbjct: 115 VIRNKQTGQSEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERRDDSA 174
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+HTIFVGDLAADVTDY+LQETF++ Y S +GAKVV DR+TGR+KGYGFV+F DESEQLRA
Sbjct: 175 EHTIFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRA 234
Query: 233 MTEMNGVFCSTRPMRIGPATNKKTV----SASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
MTEMNGV CSTRPMRIGPA NKK V A+YQN Q Q + DPNNTT+FVG LD V
Sbjct: 235 MTEMNGVLCSTRPMRIGPAANKKPVGTPQKATYQNPQATQGESDPNNTTIFVGGLDPTVA 294
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
+EHLR++FS YG+LVHVKI AGKRCGFVQF R+ AE+AL LNGTQLGGQ+IRLSWGRS
Sbjct: 295 EEHLRQVFSPYGELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLGGQSIRLSWGRS 354
Query: 349 PSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAP--QDPSMYYGGYPGYGNYQQPQQ 403
PS+KQ D QW Y + Y AP QDP+MYYG YPGY NYQQPQQ
Sbjct: 355 PSSKQT--DQTQWGGSGGAYYGYGQGYEAYGYAPPAQDPNMYYGNYPGYANYQQPQQ 409
>gi|15221071|ref|NP_172630.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75336898|sp|Q9SAB3.1|RB45B_ARATH RecName: Full=Polyadenylate-binding protein RBP45B;
Short=Poly(A)-binding protein RBP45B; AltName:
Full=RNA-binding protein 45B; Short=AtRBP45B
gi|4835793|gb|AAD30259.1|AC007296_20 Similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains. ESTs gb|T44278, gb|R65195, gb|N65904,
gb|H37499, gb|R90487, gb|N95952, gb|T44278, gb|Z20166,
gb|N96891, gb|W43137, gb|F15504, gb|F15495 and gb|Z30868
come from this gene [Arabidopsis thaliana]
gi|20260604|gb|AAM13200.1| similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains [Arabidopsis thaliana]
gi|30725662|gb|AAP37853.1| At1g11650 [Arabidopsis thaliana]
gi|332190643|gb|AEE28764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 405
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 258/393 (65%), Positives = 292/393 (74%), Gaps = 35/393 (8%)
Query: 1 MMQPAPGAVPP--PPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWAT 58
M QP PG + P PPP A QY YQQ PP PP MW
Sbjct: 2 MQQPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPP----------------PPQMWNP 45
Query: 59 QAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ 118
QAAAP P Q EIRTLWIGDLQYWMDE +L CFAHTGE+V+ KVIRNKQ
Sbjct: 46 QAAAP-------PSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQ 98
Query: 119 TGQIEGYGFIEFISRAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTPDHTIF 177
TGQ+EGYGFIEF S A AERVLQTFN P+P+ +Q FRLNWAS +G+KRDD+PD+TIF
Sbjct: 99 TGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDSPDYTIF 158
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDLAADVTDY+L ETFRA YPS KGAKVVIDR+TGRTKGYGFVRF DESEQ+RAMTEMN
Sbjct: 159 VGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMN 218
Query: 238 GVFCSTRPMRIGPATNKKTVSA---SYQNSQV-AQSDDDPNNTTVFVGNLDSIVTDEHLR 293
GV CSTRPMRIGPA +KK V+ SYQ+S +D+DPNNTTVFVG LD+ VTD+HL+
Sbjct: 219 GVPCSTRPMRIGPAASKKGVTGQRDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLK 278
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
+FSQYG++VHVKIPAGKRCGFVQF+++SCAEEALRMLNG QLGG +RLSWGRSPSNKQ
Sbjct: 279 NVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQ 338
Query: 354 AQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPS 386
+ DP+Q+ Y GY QG E YGY PQDP+
Sbjct: 339 SG-DPSQFY--YGGYGQGQEQYGY--TMPQDPN 366
>gi|21592583|gb|AAM64532.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 404
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 256/393 (65%), Positives = 291/393 (74%), Gaps = 35/393 (8%)
Query: 1 MMQPAPGAVPP--PPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWAT 58
M QP PG + P PPP A QY YQQ PP PP MW
Sbjct: 1 MQQPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPP----------------PPQMWNP 44
Query: 59 QAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ 118
QAAAP P Q EIRTLWIGDLQYWMDE +L CFAHTGE+V+ KVIRNKQ
Sbjct: 45 QAAAP-------PSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQ 97
Query: 119 TGQIEGYGFIEFISRAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTPDHTIF 177
TGQ+EGYGFIEF S A AERVLQTFN P+P+ +Q FRL WAS +G+KRDD+PD+TIF
Sbjct: 98 TGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLXWASLSSGDKRDDSPDYTIF 157
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDLAADVTDY+L ETFRA YPS KGAKVVI+R+TGRTKGYGFVRF DESEQ+RAMTEMN
Sbjct: 158 VGDLAADVTDYILLETFRASYPSVKGAKVVINRVTGRTKGYGFVRFSDESEQIRAMTEMN 217
Query: 238 GVFCSTRPMRIGPATNKKTVSA---SYQNSQV-AQSDDDPNNTTVFVGNLDSIVTDEHLR 293
GV CSTRPMRIGPA +KK V+ SYQ+S +D+DPNNTTVFVG LD+ VTD+HL+
Sbjct: 218 GVPCSTRPMRIGPAASKKGVTGQRDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLK 277
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
+FSQYG++VHVKIPAGKRCGFVQF+++SCAEEALRMLNG QLGG +RLSWGRSPSNKQ
Sbjct: 278 NVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQ 337
Query: 354 AQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPS 386
+ DP+Q+ Y GY QG E YGY PQDP+
Sbjct: 338 SG-DPSQFY--YGGYGQGQEQYGY--TMPQDPN 365
>gi|255563907|ref|XP_002522953.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223537765|gb|EEF39383.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 404
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/327 (73%), Positives = 273/327 (83%), Gaps = 8/327 (2%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
I++LWIGDLQ WMDE YL F+ TGEVV+ KVIRNKQTG EGYGFIEFI+RA AER+L
Sbjct: 65 IKSLWIGDLQQWMDEGYLFNIFSGTGEVVSAKVIRNKQTGMPEGYGFIEFINRAAAERIL 124
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
QT+NGT MPN EQNFRLNWA+ AGE+R DD PD+T+FVGDLA DV D++LQETFR YP
Sbjct: 125 QTYNGTQMPNTEQNFRLNWATLAAGERRQDDGPDYTVFVGDLAPDVNDFILQETFRTVYP 184
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV-- 257
S KGAKVV DRLTGRTKGYGFVRFGDE+EQ RAM EMNG +CSTR MRIGPA KK
Sbjct: 185 SVKGAKVVTDRLTGRTKGYGFVRFGDENEQRRAMVEMNGQYCSTRAMRIGPAATKKPAVQ 244
Query: 258 ---SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
A YQ++Q Q ++DPNNTT+FVG LD V+DEHLR++F +YG+LVHVKIPAGKRCG
Sbjct: 245 QYQKAPYQSTQGTQGENDPNNTTIFVGALDPSVSDEHLRQVFGKYGELVHVKIPAGKRCG 304
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYEN 374
FVQFA+R+CAE+AL LNGTQL GQ+IRLSWGRSPSNKQAQPD +QWN GYYGYAQGY+
Sbjct: 305 FVQFANRACAEQALLGLNGTQLAGQSIRLSWGRSPSNKQAQPDQSQWNGGYYGYAQGYDA 364
Query: 375 YGYAAAAPQDPSMYYGGYPGYGNYQQP 401
YGY A PQDP+MYY GYPGYGNYQQP
Sbjct: 365 YGY--APPQDPNMYYSGYPGYGNYQQP 389
>gi|218193173|gb|EEC75600.1| hypothetical protein OsI_12307 [Oryza sativa Indica Group]
Length = 406
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/328 (69%), Positives = 267/328 (81%), Gaps = 10/328 (3%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQ+WM+E YL CF+ GE+++ K+IRNKQTGQ EGYGFIEF S A AE+V
Sbjct: 65 EVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQV 124
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARY 198
LQ +NG MPNG Q F+LNWA+ GAGEKR DD D+TIFVGDLA+DVTD +LQ+TF+A Y
Sbjct: 125 LQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHY 184
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV- 257
S KGAKVV DR TGR+KGYGFV+FGD EQ RAMTEMNG +CS+RPMRIGPA+NKK +
Sbjct: 185 QSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNIG 244
Query: 258 -----SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 312
SA+YQN+Q SD DPNNTTVFVG LD VTDE L++ FS YG+LV+VKIP GKR
Sbjct: 245 GQQQPSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKR 304
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGY-AQG 371
CGFVQ+++R+ AEEA+RMLNG+QLGGQ+IRLSWGRSP NKQ Q D NQWNAGYYGY QG
Sbjct: 305 CGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQDQNQWNAGYYGYPPQG 364
Query: 372 YENYGYAAAAPQDPSMY-YGGYPGYGNY 398
Y+ YGY A PQDP+MY Y YPGYGNY
Sbjct: 365 YDPYGY-ARPPQDPAMYAYAAYPGYGNY 391
>gi|108709398|gb|ABF97193.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 406
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/328 (69%), Positives = 266/328 (81%), Gaps = 10/328 (3%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQ+WM+E YL CF+ GE+++ K+IRNKQTGQ EGYGFIEF S A AE+V
Sbjct: 65 EVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQV 124
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARY 198
LQ +NG MPNG Q F+LNWA+ GAGEKR DD D+TIFVGDLA+DVTD +LQ+TF+A Y
Sbjct: 125 LQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHY 184
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV- 257
S KGAKVV DR TGR+KGYGFV+FGD EQ RAMTEMNG +CS+RPMRIGPA+NKK +
Sbjct: 185 QSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNIG 244
Query: 258 -----SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 312
SA+YQN+Q SD DPNNTTVFVG LD VTDE L++ FS YG+LV+VKIP GKR
Sbjct: 245 GQQQPSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKR 304
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGY-AQG 371
CGFVQ+++R+ AEEA+RMLNG+QLGGQ+IRLSWGRSP NKQ Q D NQWNAGYYGY QG
Sbjct: 305 CGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQDQNQWNAGYYGYPPQG 364
Query: 372 YENYGYAAAAPQDPSMY-YGGYPGYGNY 398
Y+ YGY PQDP+MY Y YPGYGNY
Sbjct: 365 YDPYGY-VRPPQDPAMYAYAAYPGYGNY 391
>gi|12583812|gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709397|gb|ABF97192.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215678704|dbj|BAG95141.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 402
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/328 (69%), Positives = 266/328 (81%), Gaps = 10/328 (3%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQ+WM+E YL CF+ GE+++ K+IRNKQTGQ EGYGFIEF S A AE+V
Sbjct: 65 EVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQV 124
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARY 198
LQ +NG MPNG Q F+LNWA+ GAGEKR DD D+TIFVGDLA+DVTD +LQ+TF+A Y
Sbjct: 125 LQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHY 184
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV- 257
S KGAKVV DR TGR+KGYGFV+FGD EQ RAMTEMNG +CS+RPMRIGPA+NKK +
Sbjct: 185 QSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNIG 244
Query: 258 -----SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 312
SA+YQN+Q SD DPNNTTVFVG LD VTDE L++ FS YG+LV+VKIP GKR
Sbjct: 245 GQQQPSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKR 304
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGY-AQG 371
CGFVQ+++R+ AEEA+RMLNG+QLGGQ+IRLSWGRSP NKQ Q D NQWNAGYYGY QG
Sbjct: 305 CGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQDQNQWNAGYYGYPPQG 364
Query: 372 YENYGYAAAAPQDPSMY-YGGYPGYGNY 398
Y+ YGY PQDP+MY Y YPGYGNY
Sbjct: 365 YDPYGY-VRPPQDPAMYAYAAYPGYGNY 391
>gi|148910710|gb|ABR18422.1| unknown [Picea sitchensis]
Length = 418
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/349 (66%), Positives = 268/349 (76%), Gaps = 22/349 (6%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
QQ E+RTLW+GDLQYWMDETY+ +CF + EVV+VK+IRNKQTGQ EGYGF+EF S
Sbjct: 70 QQPTSADEVRTLWVGDLQYWMDETYMQSCFGNNQEVVSVKIIRNKQTGQSEGYGFVEFAS 129
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQ 191
AGAER LQ NG MPN EQ +RLNWA+FG GEKR + PD+ IFVGDLA+DVTDY+LQ
Sbjct: 130 HAGAERFLQNHNGAQMPNTEQFYRLNWATFGIGEKRPEMGPDYPIFVGDLASDVTDYLLQ 189
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
ETFR+RY + KGAKVV DR+TGR+KGYGFVRFGDE+EQ+RAMTEMNG+FCS+RPMR GPA
Sbjct: 190 ETFRSRYQTVKGAKVVSDRVTGRSKGYGFVRFGDENEQVRAMTEMNGMFCSSRPMRTGPA 249
Query: 252 TNKKTVS---------ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 302
T KKT A+ QV SD+DPNNTT+FVG LD VTDE LR+LF Q+G+L
Sbjct: 250 TTKKTTGFQQPYPKAAAAAVPPQVVASDNDPNNTTIFVGGLDPSVTDEMLRQLFGQFGEL 309
Query: 303 VHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA-------- 354
VHVKIP GKRCGFVQF +R+ AEEAL+ML+GT LG Q IRLSWGRSP+NKQ
Sbjct: 310 VHVKIPVGKRCGFVQFNNRASAEEALQMLHGTVLGQQAIRLSWGRSPANKQVQTPGWVQP 369
Query: 355 -QPDPNQWN-AGYYGYAQGYE-NYGYAAAAPQDPSMYYGGYPGYGNYQQ 400
QPDPNQWN A YYGY QGY+ YGY A PQDP+MY YGNYQQ
Sbjct: 370 QQPDPNQWNGAAYYGYGQGYDAGYGY-APQPQDPNMYSYAPYAYGNYQQ 417
>gi|116789456|gb|ABK25253.1| unknown [Picea sitchensis]
Length = 487
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/336 (67%), Positives = 263/336 (78%), Gaps = 21/336 (6%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
QQ E+RTLW+GDLQYWMDETY+ +CF + EVV+VK+IRNKQTGQ EGYGF+EF S
Sbjct: 70 QQPTSADEVRTLWVGDLQYWMDETYMQSCFGNNQEVVSVKIIRNKQTGQSEGYGFVEFAS 129
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQ 191
AGAER LQ NG MPN EQ +RLNWA+FG GEKR + PD+ IFVGDLA+DVTDY+LQ
Sbjct: 130 HAGAERFLQNHNGAQMPNTEQFYRLNWATFGIGEKRPEMGPDYPIFVGDLASDVTDYLLQ 189
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
ETFR+RY + KGAKVV DR+TGR+KGYGFVRFGDE+EQ+RAMTEMNG+FCS+RPMR GPA
Sbjct: 190 ETFRSRYQTVKGAKVVSDRVTGRSKGYGFVRFGDENEQVRAMTEMNGMFCSSRPMRTGPA 249
Query: 252 TNKKTV--------SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
T KKT +A+ QV SD+DPNNTT+FVG LD VTDE LR+LF Q+G+LV
Sbjct: 250 TTKKTTGFQQPYPKAAAAVPPQVVASDNDPNNTTIFVGGLDPSVTDEMLRQLFGQFGELV 309
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA--------- 354
HVKIP GKRCGFVQF +R+ AEEAL+ML+GT LG Q IRLSWGRSP+NKQ
Sbjct: 310 HVKIPVGKRCGFVQFNNRASAEEALQMLHGTVLGQQAIRLSWGRSPANKQVQTPGWVQPQ 369
Query: 355 QPDPNQWN-AGYYGYAQGYE-NYGYAAAAPQDPSMY 388
QPDPNQWN A YYGY QGY+ YGY A PQDP+MY
Sbjct: 370 QPDPNQWNGAAYYGYGQGYDAGYGY-APQPQDPNMY 404
>gi|30524689|emb|CAC85246.1| salt tolerance protein 6 [Beta vulgaris]
Length = 322
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/299 (72%), Positives = 252/299 (84%), Gaps = 5/299 (1%)
Query: 93 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE 152
MDE Y+ TCFA +GE+V VK+IRNKQT Q E YGFIEF + A AER+LQT+N T MPN E
Sbjct: 1 MDENYIRTCFAQSGELVNVKIIRNKQTMQSECYGFIEFSTHAAAERILQTYNNTLMPNVE 60
Query: 153 QNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRL 211
QN+RLNWA +G+GEKR +D D+TIFVGDLA DVTDY LQETFR RYPS KGAKVVIDRL
Sbjct: 61 QNYRLNWAFYGSGEKRGEDASDYTIFVGDLAPDVTDYTLQETFRVRYPSVKGAKVVIDRL 120
Query: 212 TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV--SASYQNSQVAQS 269
T R+KGYGFVRFGDESEQ RAM+EMNG+ C R MRIG A NKK+V +ASYQN+Q +
Sbjct: 121 TSRSKGYGFVRFGDESEQARAMSEMNGMMCLGRAMRIGAAANKKSVGGTASYQNNQGTPN 180
Query: 270 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALR 329
D DP+NTT+FVGNLDS VTDEHLR+ FS YG+LVHVKIPAGK+CGFVQF +RS AEEALR
Sbjct: 181 DSDPSNTTIFVGNLDSNVTDEHLRQTFSPYGELVHVKIPAGKQCGFVQFTNRSSAEEALR 240
Query: 330 MLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQW-NAGYYGYAQGYENYGYAAAAPQDPSM 387
+LNG QLGG+N+RLSWGRSP+N+Q+QPD NQW NA YYGY QGY++YGY +APQDP+M
Sbjct: 241 VLNGMQLGGRNVRLSWGRSPNNRQSQPDQNQWNNAAYYGYPQGYDSYGY-VSAPQDPNM 298
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 60 AAAPQAAGVAVPPQQQGQPGEI----RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIR 115
A G A QG P + T+++G+L + + +L F+ GE+V VK+
Sbjct: 161 ANKKSVGGTASYQNNQGTPNDSDPSNTTIFVGNLDSNVTDEHLRQTFSPYGELVHVKIPA 220
Query: 116 NKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNW 159
KQ GF++F +R+ AE L+ NG M G +N RL+W
Sbjct: 221 GKQC------GFVQFTNRSSAEEALRVLNG--MQLGGRNVRLSW 256
>gi|168064363|ref|XP_001784132.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664332|gb|EDQ51056.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 453
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/353 (63%), Positives = 263/353 (74%), Gaps = 30/353 (8%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E++TLW+GDLQYWMDE YL+T F HTGEV +VK+IRNKQTG EGYGF+EF+S AE++
Sbjct: 41 EVKTLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHVAAEKI 100
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQ +NGT MPN EQ FRLNWASFG GE+R + P+H+IFVGDLA DVTDYMLQETFR RY
Sbjct: 101 LQAYNGTQMPNTEQPFRLNWASFGIGERRPEAGPEHSIFVGDLAPDVTDYMLQETFRTRY 160
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS KGAKVV D TGR+KGYGFVRFGDE E+ RAM+EMNG++CS+RPMRI AT KK++
Sbjct: 161 PSVKGAKVVTDANTGRSKGYGFVRFGDEMERNRAMSEMNGIYCSSRPMRISAATPKKSLG 220
Query: 259 ASYQNSQVAQ-------------------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQY 299
+ N +V+ +D+DPNNTT+FVG LD V DE LR +F Q+
Sbjct: 221 PNQLNPKVSPVAVATYAAYGAQPSPQAFPTDNDPNNTTIFVGGLDPAVGDEDLRNVFGQF 280
Query: 300 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA----- 354
G+LV+VKIPAGK CGFVQF R+CAEEAL+ L+ T +G Q +RLSWGRSP NKQ
Sbjct: 281 GELVYVKIPAGKGCGFVQFTHRACAEEALQRLHQTVIGTQAVRLSWGRSPGNKQTSDPAW 340
Query: 355 --QPDPNQWN-AGYY-GYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNYQQPQ 402
DPNQWN AGYY GYAQGY+ YGY A APQDP+ YG YPGYGNY Q Q
Sbjct: 341 GHHQDPNQWNAAGYYQGYAQGYDQYGYPAPAPQDPAYAQYGNYPGYGNYPQQQ 393
>gi|224115306|ref|XP_002316998.1| predicted protein [Populus trichocarpa]
gi|222860063|gb|EEE97610.1| predicted protein [Populus trichocarpa]
Length = 403
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/289 (72%), Positives = 242/289 (83%), Gaps = 6/289 (2%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
EI++LWIGDLQ WMDE YL + F+ TGE+V KVIRNKQTG EGYGFIEF+SRA AER+
Sbjct: 67 EIKSLWIGDLQQWMDENYLLSIFSATGEIVQAKVIRNKQTGYPEGYGFIEFVSRAAAERI 126
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARY 198
LQT+NGTPMPN EQ FRLNWA+ GAGE+R DD PD T+FVGDLAADV DY+LQETFR Y
Sbjct: 127 LQTYNGTPMPNSEQAFRLNWATLGAGERRQDDGPDFTVFVGDLAADVNDYLLQETFRNVY 186
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS KGAKVV DR+TGR+KGYGF+RF DE+EQ RAM EMNG +CSTRPMRIGPA KK ++
Sbjct: 187 PSVKGAKVVTDRVTGRSKGYGFIRFADENEQRRAMVEMNGQYCSTRPMRIGPAATKKPLT 246
Query: 259 -----ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 313
A+YQN Q Q ++DPNNTT+FVG LD VTD+ LR +FS+YG+LVHVKIPAGKRC
Sbjct: 247 QQYQKATYQNPQGNQGENDPNNTTIFVGALDPSVTDDTLRAVFSKYGELVHVKIPAGKRC 306
Query: 314 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWN 362
GFVQFA+R+ AE+AL MLNGTQ+ GQNIRLSWGRSPSNKQ QPD +QWN
Sbjct: 307 GFVQFANRTSAEQALSMLNGTQIAGQNIRLSWGRSPSNKQVQPDQSQWN 355
>gi|168049769|ref|XP_001777334.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168061528|ref|XP_001782740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665773|gb|EDQ52446.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671310|gb|EDQ57864.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 416
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/357 (63%), Positives = 265/357 (74%), Gaps = 35/357 (9%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E++TLW+GDLQYWMDE YL+T F HTGEV +VK+IRNKQTG EGYGF+EF+S A AE++
Sbjct: 6 EVKTLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHAAAEKI 65
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQ +NGT MPN EQ FRLNWASFG GE+R + P+H+IFVGDLA DVTDYMLQETFR RY
Sbjct: 66 LQAYNGTQMPNTEQPFRLNWASFGIGERRPEAGPEHSIFVGDLAPDVTDYMLQETFRTRY 125
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS KGAKVV D TGR+KGYGFVRFGDE E+ RAM+EMNGV+CS+RPMRI AT KK++
Sbjct: 126 PSVKGAKVVTDANTGRSKGYGFVRFGDEMERNRAMSEMNGVYCSSRPMRISAATPKKSLG 185
Query: 259 ASYQNSQV---------------AQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELF 296
+ N +V AQ D+DPNNTT+FVG LD V DE LR +F
Sbjct: 186 PAQLNPKVDAVSPVAVATYAAYGAQPSPQAFPVDNDPNNTTIFVGGLDPAVGDEDLRNVF 245
Query: 297 SQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ-AQ 355
Q+G+LV+VKIPAGK CGFVQF R+CAEEAL+ L+ T +G Q +RLSWGRSP NKQ A
Sbjct: 246 GQFGELVYVKIPAGKGCGFVQFTHRACAEEALQRLHQTVIGTQAVRLSWGRSPGNKQTAD 305
Query: 356 P------DPNQWNAG--YYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNYQQPQQ 403
P DPNQWNAG Y GYAQGY+ YGY A PQDP+ YG YPGYGNY PQQ
Sbjct: 306 PGWGQHQDPNQWNAGGYYQGYAQGYDQYGYPAQPPQDPAYAQYGNYPGYGNY--PQQ 360
>gi|40253807|dbj|BAD05744.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
gi|40253847|dbj|BAD05783.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
Length = 427
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/325 (68%), Positives = 260/325 (80%), Gaps = 8/325 (2%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMDE Y++ CFA TGE+ +VK+IR+KQTGQ++GYGFIEF S AGAERV
Sbjct: 93 EVRTLWIGDLQYWMDENYISACFAPTGELQSVKLIRDKQTGQLQGYGFIEFTSHAGAERV 152
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NG MPN EQ +RLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFR YP
Sbjct: 153 LQTYNGAMMPNVEQTYRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYILQETFRVHYP 210
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT--V 257
S KGAKVV D++T R+KGYGFV+FGD SEQ RAMTEMNG+ CS+RPMRIGPA NKK V
Sbjct: 211 SVKGAKVVTDKMTMRSKGYGFVKFGDPSEQARAMTEMNGMVCSSRPMRIGPAANKKATGV 270
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 317
++Q QSD DP+NTT+FVG LD VTD+ L+++F+ YG +VHVKIP GKRCGFVQ
Sbjct: 271 QEKVPSAQGVQSDSDPSNTTIFVGGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRCGFVQ 330
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP--DPNQW-NAGYYGYAQGYEN 374
FA+R+ A+EAL +L GT +GGQN+RLSWGRSPSN+QAQP D NQW A Y G
Sbjct: 331 FANRASADEALVLLQGTLIGGQNVRLSWGRSPSNRQAQPQQDSNQWGGANAGYYGYGQGY 390
Query: 375 YGYAAAAPQDPSMY-YGGYPGYGNY 398
GY A PQDP+MY YG Y GY NY
Sbjct: 391 EGYGYAQPQDPNMYGYGAYAGYPNY 415
>gi|413921124|gb|AFW61056.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 249/418 (59%), Positives = 285/418 (68%), Gaps = 36/418 (8%)
Query: 7 GAVPPPPPPMAAHQYQYQQQAPPQ-----------QQPPPQPSPYMMMMPPQPQAQPPAM 55
G +PPP P HQY Q Q PPP + Y +PP P A
Sbjct: 26 GGIPPPMAPQ--HQYAPQMWGQAPPPPPPPQAAYGQAPPPPQAAYGQALPP-----PQAA 78
Query: 56 WATQAAAPQAA------GVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVV 109
+ PQAA A P E+RTLWIGDLQYWMD+ Y+ CFA TGEV
Sbjct: 79 YGQAPPPPQAAYYGAVPAPAAVAAAPVGPSEVRTLWIGDLQYWMDDNYIYGCFASTGEVQ 138
Query: 110 AVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRD 169
VK+IR+K TGQ++GYGFIEFISRA AERVLQT+NGT MPN E FRLNWAS AGEKRD
Sbjct: 139 NVKLIRDKHTGQLQGYGFIEFISRAAAERVLQTYNGTMMPNVELPFRLNWAS--AGEKRD 196
Query: 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
DTPD+TIFVGDLAADVTDY+LQETFRA YPS KGAKVV D+LT RTKGYGFV+FGD +EQ
Sbjct: 197 DTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPNEQ 256
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKK--TVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
RAMTEMNG+ CS+RPMRIGPA NKK V ++Q QSD+DPNNTT+FVG LD V
Sbjct: 257 ARAMTEMNGMLCSSRPMRIGPAANKKATVVQEKVPSAQGVQSDNDPNNTTIFVGGLDPNV 316
Query: 288 TDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
T++ L+++F+ YG +VHVKIP GKRCGFVQ+A+RS AEEAL +L GT +GGQN+RLSWGR
Sbjct: 317 TEDMLKQVFTPYGDVVHVKIPVGKRCGFVQYANRSSAEEALVILQGTLVGGQNVRLSWGR 376
Query: 348 SPSNKQAQP--DPNQWNAGYYGYAQGYENYGYAAAAP--QDPSMY---YGGYPGYGNY 398
SPSNKQ QP D NQW AG GY A P QDP+MY G Y GY NY
Sbjct: 377 SPSNKQVQPQQDSNQW-AGANAGYYGYGQGYEAYGYPQSQDPNMYNYGAGAYAGYPNY 433
>gi|194702946|gb|ACF85557.1| unknown [Zea mays]
gi|413921126|gb|AFW61058.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 456
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 240/383 (62%), Positives = 275/383 (71%), Gaps = 23/383 (6%)
Query: 31 QQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAA------GVAVPPQQQGQPGEIRTL 84
Q PPP + Y +PP P A + PQAA A P E+RTL
Sbjct: 69 QAPPPPQAAYGQALPP-----PQAAYGQAPPPPQAAYYGAVPAPAAVAAAPVGPSEVRTL 123
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
WIGDLQYWMD+ Y+ CFA TGEV VK+IR+K TGQ++GYGFIEFISRA AERVLQT+N
Sbjct: 124 WIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAERVLQTYN 183
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
GT MPN E FRLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFRA YPS KGA
Sbjct: 184 GTMMPNVELPFRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGA 241
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK--TVSASYQ 262
KVV D+LT RTKGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA NKK V
Sbjct: 242 KVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPMRIGPAANKKATVVQEKVP 301
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRS 322
++Q QSD+DPNNTT+FVG LD VT++ L+++F+ YG +VHVKIP GKRCGFVQ+A+RS
Sbjct: 302 SAQGVQSDNDPNNTTIFVGGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRCGFVQYANRS 361
Query: 323 CAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP--DPNQWNAGYYGYAQGYENYGYAAA 380
AEEAL +L GT +GGQN+RLSWGRSPSNKQ QP D NQW AG GY A
Sbjct: 362 SAEEALVILQGTLVGGQNVRLSWGRSPSNKQVQPQQDSNQW-AGANAGYYGYGQGYEAYG 420
Query: 381 AP--QDPSMY---YGGYPGYGNY 398
P QDP+MY G Y GY NY
Sbjct: 421 YPQSQDPNMYNYGAGAYAGYPNY 443
>gi|357144721|ref|XP_003573391.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Brachypodium distachyon]
Length = 435
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/329 (65%), Positives = 256/329 (77%), Gaps = 12/329 (3%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMDE Y+ CFAHTGEV +VK+IR+KQTGQ++GYGF+EF +RAGAERV
Sbjct: 96 EVRTLWIGDLQYWMDENYVYGCFAHTGEVQSVKLIRDKQTGQLQGYGFVEFTTRAGAERV 155
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NG MPN E +RLNWAS AGEKRDD PD+TIFVGDLAADVTDY+LQETFR YP
Sbjct: 156 LQTYNGATMPNVEMPYRLNWAS--AGEKRDDGPDYTIFVGDLAADVTDYILQETFRVHYP 213
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S KGAKVV D+LT R+KGYGFV+F D +EQ RAMTEMNG+ CS+RPMRIGPA NK+ VS
Sbjct: 214 SVKGAKVVTDKLTMRSKGYGFVKFSDPTEQTRAMTEMNGMVCSSRPMRIGPAANKQKVSG 273
Query: 260 SYQ---NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFV 316
+ + ++Q QSD DP+NTT+FVG LD VT++ L+++F+ YG++VHVKIP GKRCGFV
Sbjct: 274 AQEKVPSAQGVQSDSDPSNTTIFVGGLDPNVTEDMLKQVFAPYGEVVHVKIPVGKRCGFV 333
Query: 317 QFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP--DPNQWNA----GYYGYAQ 370
Q+A RS +EEAL ML GT +GGQN+RLSWGRSPSNKQ Q D NQW Y
Sbjct: 334 QYASRSSSEEALLMLQGTVIGGQNVRLSWGRSPSNKQVQTPQDSNQWGGATANAGYYGYG 393
Query: 371 GYENYGYAAAAPQDPSMY-YGGYPGYGNY 398
AA PQDP+MY YG Y GY NY
Sbjct: 394 QGYEAYGYAAQPQDPNMYGYGAYAGYPNY 422
>gi|226504372|ref|NP_001141359.1| uncharacterized protein LOC100273450 [Zea mays]
gi|194704160|gb|ACF86164.1| unknown [Zea mays]
gi|413921127|gb|AFW61059.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/381 (62%), Positives = 274/381 (71%), Gaps = 22/381 (5%)
Query: 31 QQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAA------GVAVPPQQQGQPGEIRTL 84
Q PPP + Y +PP P A + PQAA A P E+RTL
Sbjct: 69 QAPPPPQAAYGQALPP-----PQAAYGQAPPPPQAAYYGAVPAPAAVAAAPVGPSEVRTL 123
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
WIGDLQYWMD+ Y+ CFA TGEV VK+IR+K TGQ++GYGFIEFISRA AERVLQT+N
Sbjct: 124 WIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAERVLQTYN 183
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
GT MPN E FRLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFRA YPS KGA
Sbjct: 184 GTMMPNVELPFRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGA 241
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK--TVSASYQ 262
KVV D+LT RTKGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA NKK V
Sbjct: 242 KVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPMRIGPAANKKATVVQEKVP 301
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRS 322
++Q QSD+DPNNTT+FVG LD VT++ L+++F+ YG +VHVKIP GKRCGFVQ+A+RS
Sbjct: 302 SAQGVQSDNDPNNTTIFVGGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRCGFVQYANRS 361
Query: 323 CAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAP 382
AEEAL +L GT +GGQN+RLSWGRSPSNKQ Q D NQW AG GY A P
Sbjct: 362 SAEEALVILQGTLVGGQNVRLSWGRSPSNKQVQ-DSNQW-AGANAGYYGYGQGYEAYGYP 419
Query: 383 --QDPSMY---YGGYPGYGNY 398
QDP+MY G Y GY NY
Sbjct: 420 QSQDPNMYNYGAGAYAGYPNY 440
>gi|293337265|ref|NP_001168324.1| uncharacterized protein LOC100382091 [Zea mays]
gi|223947441|gb|ACN27804.1| unknown [Zea mays]
gi|223947469|gb|ACN27818.1| unknown [Zea mays]
gi|413933766|gb|AFW68317.1| hypothetical protein ZEAMMB73_975236, partial [Zea mays]
Length = 406
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/356 (62%), Positives = 267/356 (75%), Gaps = 13/356 (3%)
Query: 52 PPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAV 111
PPAMW AA E RTLWIGDLQYWMDE YL +CF+ GEV++V
Sbjct: 43 PPAMWGQPPPQAAAAPAPAGGGAGD---EARTLWIGDLQYWMDENYLYSCFSQAGEVISV 99
Query: 112 KVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DD 170
K+IRNKQTGQ EGYGFIEF + A AE+VLQ +NG MPN Q F+LNWA+ GAGEKR DD
Sbjct: 100 KIIRNKQTGQPEGYGFIEFSNHAVAEQVLQNYNGQMMPNVNQPFKLNWATSGAGEKRGDD 159
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
D+TIFVGDLA+DVTD++LQ+TF++RYPS KGAKVV DR TGR+KGYGFV+F D EQ
Sbjct: 160 GSDYTIFVGDLASDVTDFILQDTFKSRYPSVKGAKVVFDRTTGRSKGYGFVKFADSDEQT 219
Query: 231 RAMTEMNGVFCSTRPMRIGPATNKKTV------SASYQNSQVAQSDDDPNNTTVFVGNLD 284
RAMTEMNG +CS+R MR+GPA+NKK SA YQN+Q SD DPNNTTVFVG LD
Sbjct: 220 RAMTEMNGQYCSSRAMRLGPASNKKNTGGPQPSSAIYQNTQGTDSDSDPNNTTVFVGGLD 279
Query: 285 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 344
VTDE L++ FS YG+L++VKIP GKRCGFVQ+++R+ AEEA+R+LNG+QLGGQ+IRLS
Sbjct: 280 PSVTDELLKQTFSPYGELLYVKIPVGKRCGFVQYSNRASAEEAIRVLNGSQLGGQSIRLS 339
Query: 345 WGRSPSNKQAQPDPNQWNAGYYGYAQGYEN-YGYAAAAPQDPSMY-YGGYPGYGNY 398
WGRSP+NKQ Q + +QW+ G Y + YGYA PQDP+MY Y YPGYGNY
Sbjct: 340 WGRSPANKQPQQEQSQWSGGGYYGYPQGYDPYGYARP-PQDPAMYAYAAYPGYGNY 394
>gi|359478387|ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 438
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/365 (60%), Positives = 267/365 (73%), Gaps = 25/365 (6%)
Query: 60 AAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQT 119
AA + A P Q E+RTLWIGDLQYW+DE YL++CFAHTGEV+++K+IRNK T
Sbjct: 19 AATVSSMASAQPYTQPTSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKIT 78
Query: 120 GQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFV 178
GQ EGYGF+EF+S A AER+LQ +NGT MP EQ FRLNWASFG GE+R D P+H+IFV
Sbjct: 79 GQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFV 138
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDLA DVTDY+LQETFRA+YPS +GAKVV D TGRTKGYGFV+F DE E+ RAMTEMNG
Sbjct: 139 GDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNG 198
Query: 239 VFCSTRPMRIGPATNKKTVSASYQNS-----------------QVAQSDDDPNNTTVFVG 281
V+CSTRPMRI AT KKT Q + Q +D+D NNTT+FVG
Sbjct: 199 VYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTIFVG 258
Query: 282 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
NLD VT+E L+++FSQ+G+LV+VKIPAG+ CGFVQF R+ AEEA++ + GT +G +
Sbjct: 259 NLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQLVV 318
Query: 342 RLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNYQQ 400
R+SWGRSP+ KQA DP+QW++ YYGY QGY+ Y Y A QDPS+Y YG Y GY Y
Sbjct: 319 RISWGRSPTAKQA--DPSQWSSAYYGYGQGYDAYPYGAT--QDPSLYAYGAYAGYLQY-- 372
Query: 401 PQQPQ 405
PQQ +
Sbjct: 373 PQQAE 377
>gi|326513006|dbj|BAK03410.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525779|dbj|BAJ88936.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 436
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/336 (66%), Positives = 264/336 (78%), Gaps = 19/336 (5%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMDE Y+ +CFA+TGE +VK+IR+KQTGQ++GYGF+EF S A AERV
Sbjct: 89 EVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERV 148
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQTFNG MPN E +RLNWAS AGEKRDDTPD+TIFVGDLAADVTDYMLQETFR YP
Sbjct: 149 LQTFNGQMMPNVELAYRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYMLQETFRVHYP 206
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S KGAKVV D++T R+KGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA N+KT
Sbjct: 207 SVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAANRKTTGV 266
Query: 260 SYQ------NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 313
+ N+Q AQSD+DPNNTT+FVG LD VT++ L+++F+ YG++VHVKIP GKRC
Sbjct: 267 QERVPIPNTNTQGAQSDNDPNNTTIFVGGLDPNVTEDALKQVFAPYGEVVHVKIPVGKRC 326
Query: 314 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP-DPNQW---------NA 363
GFVQ+A+R AE+AL++L GT +GGQN+RLSWGRSPSNKQ QP + QW
Sbjct: 327 GFVQYANRPSAEQALQLLQGTLVGGQNVRLSWGRSPSNKQTQPQEATQWGAGAAAGAAGG 386
Query: 364 GYYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNY 398
Y GY QGYE YG A PQDP+MY YG Y GY NY
Sbjct: 387 YYAGYGQGYEAYGQGYAQPQDPNMYGYGAYAGYPNY 422
>gi|225435468|ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 447
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/372 (58%), Positives = 267/372 (71%), Gaps = 30/372 (8%)
Query: 60 AAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQT 119
AA + A P Q E+RTLWIGDLQYW+DE YL++CFAHTGEV+++K+IRNK T
Sbjct: 19 AATVSSMASAQPYTQPTSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKIT 78
Query: 120 GQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFV 178
GQ EGYGF+EF+S A AER+LQ +NGT MP EQ FRLNWASFG GE+R D P+H+IFV
Sbjct: 79 GQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFV 138
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDLA DVTDY+LQETFRA+YPS +GAKVV D TGRTKGYGFV+F DE E+ RAMTEMNG
Sbjct: 139 GDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNG 198
Query: 239 VFCSTRPMRIGPATNKKTVSASYQNS-----------------QVAQSDDDPNNTTVFVG 281
V+CSTRPMRI AT KKT Q + Q +D+D NNTT+FVG
Sbjct: 199 VYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTIFVG 258
Query: 282 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
NLD VT+E L+++FSQ+G+LV+VKIPAG+ CGFVQF R+ AEEA++ + GT +G +
Sbjct: 259 NLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQLVV 318
Query: 342 RLSWGRSPSNKQAQP-------DPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY-YGGYP 393
R+SWGRSP+ KQ P DP+QW++ YYGY QGY+ Y Y A QDPS+Y YG Y
Sbjct: 319 RISWGRSPTAKQDLPGSWGQQADPSQWSSAYYGYGQGYDAYPYGAT--QDPSLYAYGAYA 376
Query: 394 GYGNYQQPQQPQ 405
GY Y PQQ +
Sbjct: 377 GYLQY--PQQAE 386
>gi|297746331|emb|CBI16387.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/370 (59%), Positives = 266/370 (71%), Gaps = 30/370 (8%)
Query: 60 AAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQT 119
AA + A P Q E+RTLWIGDLQYW+DE YL++CFAHTGEV+++K+IRNK T
Sbjct: 19 AATVSSMASAQPYTQPTSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKIT 78
Query: 120 GQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFV 178
GQ EGYGF+EF+S A AER+LQ +NGT MP EQ FRLNWASFG GE+R D P+H+IFV
Sbjct: 79 GQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFV 138
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDLA DVTDY+LQETFRA+YPS +GAKVV D TGRTKGYGFV+F DE E+ RAMTEMNG
Sbjct: 139 GDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNG 198
Query: 239 VFCSTRPMRIGPATNKKTVSASYQNS-----------------QVAQSDDDPNNTTVFVG 281
V+CSTRPMRI AT KKT Q + Q +D+D NNTT+FVG
Sbjct: 199 VYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTIFVG 258
Query: 282 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
NLD VT+E L+++FSQ+G+LV+VKIPAG+ CGFVQF R+ AEEA++ + GT +G +
Sbjct: 259 NLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQLVV 318
Query: 342 RLSWGRSPSNKQAQP-------DPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY-YGGYP 393
R+SWGRSP+ KQ P DP+QW++ YYGY QGY+ Y Y A QDPS+Y YG Y
Sbjct: 319 RISWGRSPTAKQDLPGSWGQQADPSQWSSAYYGYGQGYDAYPYGAT--QDPSLYAYGAYA 376
Query: 394 GYGNYQQPQQ 403
GY Y PQQ
Sbjct: 377 GYLQY--PQQ 384
>gi|224124344|ref|XP_002319308.1| predicted protein [Populus trichocarpa]
gi|222857684|gb|EEE95231.1| predicted protein [Populus trichocarpa]
Length = 344
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/280 (72%), Positives = 235/280 (83%), Gaps = 6/280 (2%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
EI++LWIGDLQ WMDE Y+ + F+ TGEVV KVIRNKQTG EGYGFIEF+S A AER+
Sbjct: 65 EIKSLWIGDLQQWMDENYILSIFSTTGEVVQAKVIRNKQTGYPEGYGFIEFVSHAAAERI 124
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARY 198
LQT+NGTPMPN EQ FRLNWA+ GAGE+R DD PD+T+F+GDLAADV DY+LQETFR Y
Sbjct: 125 LQTYNGTPMPNSEQTFRLNWATLGAGERRQDDGPDYTVFIGDLAADVNDYLLQETFRNVY 184
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S KGAKVV DR+TGR+KGYGFVRF DE+EQ+RAM EMNG +CSTRPMRIGPA KK ++
Sbjct: 185 SSVKGAKVVTDRVTGRSKGYGFVRFADENEQMRAMVEMNGQYCSTRPMRIGPAATKKPLT 244
Query: 259 -----ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 313
A+YQ+ Q Q + DPNNTT+FVG LD VTD+ LR +FS+YG+LVHVKIPAGKRC
Sbjct: 245 QQYQKAAYQSPQGNQGESDPNNTTIFVGALDPSVTDDTLRAVFSKYGELVHVKIPAGKRC 304
Query: 314 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
GFVQFA+R+CAE+AL MLNGTQ+ GQNIRLSWGRSPSNKQ
Sbjct: 305 GFVQFANRTCAEQALSMLNGTQIAGQNIRLSWGRSPSNKQ 344
>gi|357166074|ref|XP_003580589.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Brachypodium distachyon]
Length = 426
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/330 (65%), Positives = 262/330 (79%), Gaps = 13/330 (3%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMDETY++ CFA TGE+ +VK+IR+KQTGQ++GYGF+EF S A AERV
Sbjct: 86 EVRTLWIGDLQYWMDETYIHGCFASTGELQSVKLIRDKQTGQLQGYGFVEFTSHAAAERV 145
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQ +NG MPN + +RLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFR YP
Sbjct: 146 LQGYNGHAMPNVDLAYRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYILQETFRVHYP 203
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S KGAKVV D++T R+KGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA N+KT
Sbjct: 204 SVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAANRKTTGV 263
Query: 260 SYQ----NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGF 315
+ N+Q AQSD+DPNNTT+FVG LD VT++ L+++F+ YG+++HVKIP GKRCGF
Sbjct: 264 QERVPNTNTQGAQSDNDPNNTTIFVGGLDPNVTEDALKQVFAPYGEVIHVKIPVGKRCGF 323
Query: 316 VQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP--DPNQW----NAGYYGYA 369
VQF +R AE+AL+ML GT +GGQN+RLSWGRSPSNKQAQP + +QW AGYYG
Sbjct: 324 VQFVNRPSAEQALQMLQGTPIGGQNVRLSWGRSPSNKQAQPQQESSQWGANAGAGYYGGY 383
Query: 370 QGYENYGYAAAAPQDPSMY-YGGYPGYGNY 398
+ A PQDP+MY YG Y GY NY
Sbjct: 384 GQGYDAYGGYAQPQDPNMYGYGAYAGYPNY 413
>gi|326495314|dbj|BAJ85753.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 385
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/383 (60%), Positives = 269/383 (70%), Gaps = 44/383 (11%)
Query: 1 MMQPAPGAVPPPP------------PPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQP 48
M QP PG PP P PPM HQ APP Q QP +PPQ
Sbjct: 2 MPQPQPGVAPPHPASGAPPQWGAIPPPMLPHQLY----APPPLQMWSQP------LPPQQ 51
Query: 49 ----QAQPPAMWATQAAAPQAAGV---AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTC 101
QAQPP PQ A +VP Q P E RTLWIGDLQYWMDE Y+ C
Sbjct: 52 AAYGQAQPP---------PQTAYYGWPSVPTQAPAGPNEARTLWIGDLQYWMDENYVYNC 102
Query: 102 FAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS 161
FA TGEV +VK+IR+KQTGQ++GYGFIEF SRAGAERVLQTFNG MPN E +RLNWA+
Sbjct: 103 FASTGEVQSVKLIRDKQTGQLQGYGFIEFTSRAGAERVLQTFNGAMMPNVEMTYRLNWAT 162
Query: 162 FGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFV 221
AGEK DD D+TIFVGDLAADVTDY+LQETFRA+YPS KGAKVV D+LT R+KGYGFV
Sbjct: 163 --AGEKHDDGADYTIFVGDLAADVTDYLLQETFRAQYPSVKGAKVVTDKLTMRSKGYGFV 220
Query: 222 RFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT---VSASYQNSQVAQSDDDPNNTTV 278
+FGD +EQ RAMTEMNG+ CS+RPMRIGPA NK+ V +Q Q+D+DP+N+T+
Sbjct: 221 KFGDPTEQTRAMTEMNGMICSSRPMRIGPAANKQKANGVQEKVPTAQGIQTDNDPSNSTI 280
Query: 279 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 338
FVG LD T++ L+++F+ YG++VHVKIP GKRCGFVQ+A RS AEEAL ML GT + G
Sbjct: 281 FVGGLDPSATEDVLKQVFTPYGEVVHVKIPVGKRCGFVQYASRSSAEEALLMLQGTMIEG 340
Query: 339 QNIRLSWGRSPSNKQAQPDPNQW 361
QN+RLSWGRSPSNKQ Q D NQW
Sbjct: 341 QNVRLSWGRSPSNKQVQ-DFNQW 362
>gi|326513618|dbj|BAJ87828.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/385 (60%), Positives = 269/385 (69%), Gaps = 45/385 (11%)
Query: 1 MMQPAPGAVPPPP------------PPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQP 48
M QP PG PP P PPM HQ APP Q QP +PPQ
Sbjct: 2 MPQPQPGVAPPHPASGAPPQWGAIPPPMLPHQLY----APPPLQMWSQP------LPPQQ 51
Query: 49 ----QAQPPAMWATQAAAPQAAGV---AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTC 101
QAQPP PQ A +VP Q P E RTLWIGDLQYWMDE Y+ C
Sbjct: 52 AAYGQAQPP---------PQTAYYGWPSVPTQAPAGPNEARTLWIGDLQYWMDENYVYNC 102
Query: 102 FAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS 161
FA TGEV +VK+IR+KQTGQ++GYGFIEF SRAGAERVLQTFNG MPN E +RLNWA+
Sbjct: 103 FASTGEVQSVKLIRDKQTGQLQGYGFIEFTSRAGAERVLQTFNGAMMPNVEMAYRLNWAT 162
Query: 162 FGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFV 221
AGEK DD D+TIFVGDLAADVTDY+LQETFRA+YPS KGAKVV D+LT R+KGYGFV
Sbjct: 163 --AGEKHDDGADYTIFVGDLAADVTDYLLQETFRAQYPSVKGAKVVTDKLTMRSKGYGFV 220
Query: 222 RFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT---VSASYQNSQVAQSDDDPNNTTV 278
+FGD +EQ RAMTEMNG+ CS+RPMRIGPA NK+ V +Q Q+D+DP+N+T+
Sbjct: 221 KFGDPTEQTRAMTEMNGMICSSRPMRIGPAANKQKANGVQEKVPTAQGIQTDNDPSNSTI 280
Query: 279 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 338
FVG LD T++ L+++F+ YG++VHVKIP GKRCGFVQ+A RS AEEAL ML GT + G
Sbjct: 281 FVGGLDPSATEDVLKQVFTPYGEVVHVKIPVGKRCGFVQYASRSSAEEALLMLQGTMIEG 340
Query: 339 QNIRLSWGRSPSNKQAQP--DPNQW 361
QN+RLSWGRSPSNKQ Q D NQW
Sbjct: 341 QNVRLSWGRSPSNKQVQSQQDFNQW 365
>gi|115460682|ref|NP_001053941.1| Os04g0625800 [Oryza sativa Japonica Group]
gi|113565512|dbj|BAF15855.1| Os04g0625800 [Oryza sativa Japonica Group]
gi|215767966|dbj|BAH00195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 425
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/327 (65%), Positives = 256/327 (78%), Gaps = 10/327 (3%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E++TLWIGDLQ WMDE+Y+ CFA TGEV +VK+IR+KQ+GQ++GYGF+EF SRA A+R+
Sbjct: 88 EVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRI 147
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NG MPN E FRLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFR YP
Sbjct: 148 LQTYNGQMMPNVEMVFRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYP 205
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT--V 257
S KGAKVV D++T R+KGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA NKKT V
Sbjct: 206 SVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGV 265
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 317
N+Q AQS++DPNNTT+FVG LD VT++ L+++F+ YG++VHVKIP GKRCGFVQ
Sbjct: 266 QERVPNAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQ 325
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQW-----NAGYYGYAQGY 372
+ +R AE+AL +L GT +GGQN+RLSWGRS SNKQ Q D NQW GYYG
Sbjct: 326 YVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSNKQPQHDSNQWGAGAGAGGYYGGYGQG 385
Query: 373 ENYGYAAAAPQDPSMY-YGGYPGYGNY 398
A PQDP+MY YG Y GY NY
Sbjct: 386 YEAYGGYAQPQDPNMYGYGAYAGYPNY 412
>gi|39545835|emb|CAE04743.3| OSJNBb0060E08.6 [Oryza sativa Japonica Group]
gi|116309791|emb|CAH66831.1| OSIGBa0148A10.8 [Oryza sativa Indica Group]
Length = 414
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/327 (65%), Positives = 256/327 (78%), Gaps = 10/327 (3%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E++TLWIGDLQ WMDE+Y+ CFA TGEV +VK+IR+KQ+GQ++GYGF+EF SRA A+R+
Sbjct: 77 EVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRI 136
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NG MPN E FRLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFR YP
Sbjct: 137 LQTYNGQMMPNVEMVFRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYP 194
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT--V 257
S KGAKVV D++T R+KGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA NKKT V
Sbjct: 195 SVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGV 254
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 317
N+Q AQS++DPNNTT+FVG LD VT++ L+++F+ YG++VHVKIP GKRCGFVQ
Sbjct: 255 QERVPNAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQ 314
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQW-----NAGYYGYAQGY 372
+ +R AE+AL +L GT +GGQN+RLSWGRS SNKQ Q D NQW GYYG
Sbjct: 315 YVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSNKQPQHDSNQWGAGAGAGGYYGGYGQG 374
Query: 373 ENYGYAAAAPQDPSMY-YGGYPGYGNY 398
A PQDP+MY YG Y GY NY
Sbjct: 375 YEAYGGYAQPQDPNMYGYGAYAGYPNY 401
>gi|125549823|gb|EAY95645.1| hypothetical protein OsI_17510 [Oryza sativa Indica Group]
Length = 426
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/327 (65%), Positives = 256/327 (78%), Gaps = 10/327 (3%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E++TLWIGDLQ WMDE+Y+ CFA TGEV +VK+IR+KQ+GQ++GYGF+EF SRA A+R+
Sbjct: 89 EVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRI 148
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NG MPN E FRLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFR YP
Sbjct: 149 LQTYNGQMMPNVEMVFRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYP 206
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT--V 257
S KGAKVV D++T R+KGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA NKKT V
Sbjct: 207 SVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGV 266
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 317
N+Q AQS++DPNNTT+FVG LD VT++ L+++F+ YG++VHVKIP GKRCGFVQ
Sbjct: 267 QERVPNAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQ 326
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQW-----NAGYYGYAQGY 372
+ +R AE+AL +L GT +GGQN+RLSWGRS SNKQ Q D NQW GYYG
Sbjct: 327 YVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSNKQPQHDSNQWGAGAGAGGYYGGYGQG 386
Query: 373 ENYGYAAAAPQDPSMY-YGGYPGYGNY 398
A PQDP+MY YG Y GY NY
Sbjct: 387 YEAYGGYAQPQDPNMYGYGAYAGYPNY 413
>gi|242074396|ref|XP_002447134.1| hypothetical protein SORBIDRAFT_06g029180 [Sorghum bicolor]
gi|241938317|gb|EES11462.1| hypothetical protein SORBIDRAFT_06g029180 [Sorghum bicolor]
Length = 440
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/336 (65%), Positives = 254/336 (75%), Gaps = 21/336 (6%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMDE+Y+ CF TGEV VK+IR+K +GQ++GYGF+EF SRA AERV
Sbjct: 90 EVRTLWIGDLQYWMDESYVLGCFLSTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERV 149
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NG MPN E FRLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFR YP
Sbjct: 150 LQTYNGQMMPNVELTFRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYP 207
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S KGAKVV D+LT RTKGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA ++K
Sbjct: 208 SVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNTGG 267
Query: 260 SYQ----NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGF 315
Q NSQ AQS++DPNNTT+FVG LD VT++ L+++FS YG++VHVKIP GKRCGF
Sbjct: 268 VVQERVPNSQGAQSENDPNNTTIFVGGLDPNVTEDTLKQVFSPYGEVVHVKIPVGKRCGF 327
Query: 316 VQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP--DPNQWNAGYYGYAQGYE 373
VQF R AE+AL ML G +G QN+RLSWGRS SNKQAQP + NQW A A GY
Sbjct: 328 VQFVTRPSAEQALLMLQGALIGAQNVRLSWGRSLSNKQAQPQQESNQWGAAAAAGAGGYY 387
Query: 374 NY----------GYAAAAPQDPSMY-YGGYPGYGNY 398
GY A PQDP+MY YG Y GY NY
Sbjct: 388 GGYGQGYEAYGSGY--AQPQDPNMYGYGAYAGYPNY 421
>gi|449469386|ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Cucumis
sativus]
Length = 422
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/347 (60%), Positives = 258/347 (74%), Gaps = 28/347 (8%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYW+DE+YLN+CFAHTGEV+++K+IRNK TGQ EGYGF+EF+S A AER+
Sbjct: 18 EVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERI 77
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQT+NGT MP EQ FRLNWASFG GE+R D P+H+IFVGDLA DVTDY+LQETFRA+Y
Sbjct: 78 LQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQY 137
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS +GAKVV D TGR+KGYGFV+F DE+E+ RAM+EMNGV+CSTRPMRI AT KKT+
Sbjct: 138 PSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAATPKKTIG 197
Query: 259 ASYQNSQ---------------VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
Q S V +D D NNTT+FVGNLD +T+E L++ F Q+G++
Sbjct: 198 VQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQFGEIA 257
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA------QPD 357
+VKIPAGK CGFVQF R+ AEEA++ + G +G Q +R SWGR+P+ KQ Q D
Sbjct: 258 YVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDLTTWGQQVD 317
Query: 358 PNQWNAGYYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNYQQPQQ 403
PNQW+A YYGY Y+ YGY QDPS+Y YG Y GY +Y PQQ
Sbjct: 318 PNQWSA-YYGYGGTYDAYGYGVV--QDPSLYGYGAYSGYASY--PQQ 359
>gi|115453831|ref|NP_001050516.1| Os03g0569900 [Oryza sativa Japonica Group]
gi|113548987|dbj|BAF12430.1| Os03g0569900, partial [Oryza sativa Japonica Group]
Length = 446
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/342 (63%), Positives = 253/342 (73%), Gaps = 38/342 (11%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQ+WM+E YL CF+ GE+++ K+IRNKQTGQ EGYGFIEF S A AE+V
Sbjct: 109 EVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQV 168
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR---------------DDTPDHTIFVGDLAAD 184
LQ +NG MPNG Q F+LNWA+ GAGEKR D
Sbjct: 169 LQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLAS--------------D 214
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
VTD +LQ+TF+A Y S KGAKVV DR TGR+KGYGFV+FGD EQ RAMTEMNG +CS+R
Sbjct: 215 VTDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSR 274
Query: 245 PMRIGPATNKKTV------SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQ 298
PMRIGPA+NKK + SA+YQN+Q SD DPNNTTVFVG LD VTDE L++ FS
Sbjct: 275 PMRIGPASNKKNIGGQQQPSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSP 334
Query: 299 YGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP 358
YG+LV+VKIP GKRCGFVQ+++R+ AEEA+RMLNG+QLGGQ+IRLSWGRSP NKQ Q D
Sbjct: 335 YGELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQDQ 394
Query: 359 NQWNAGYYGY-AQGYENYGYAAAAPQDPSMY-YGGYPGYGNY 398
NQWNAGYYGY QGY+ YGY PQDP+MY Y YPGYGNY
Sbjct: 395 NQWNAGYYGYPPQGYDPYGY-VRPPQDPAMYAYAAYPGYGNY 435
>gi|297792959|ref|XP_002864364.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
gi|297310199|gb|EFH40623.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
Length = 398
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/318 (65%), Positives = 246/318 (77%), Gaps = 14/318 (4%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+++LWIGDLQ WMDE Y+ + F +GE + KVIRNK TGQ EGYGFIEFI+ + AERV
Sbjct: 62 EVKSLWIGDLQQWMDENYIMSVFNQSGEAQSAKVIRNKLTGQSEGYGFIEFINHSVAERV 121
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT--PDHTIFVGDLAADVTDYMLQETFRAR 197
LQT+NG MP+ EQ FRLNWA GAGEKR T PDHTIFVGDLA +VTDYML +TF+
Sbjct: 122 LQTYNGAQMPSTEQTFRLNWAQAGAGEKRHQTEGPDHTIFVGDLAPEVTDYMLSDTFKNV 181
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
Y S KGAKVV+DR TGR+KGYGFVRF DE+EQ+RAMTEMNG +CSTRPMRIGPA NK +
Sbjct: 182 YGSVKGAKVVVDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNAL 241
Query: 258 ---SASYQNSQVAQS-DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 313
A YQN+Q + D DPNNTT+FVG LD+ VTD+ L+ +F Q+G+L+HVKIP GKRC
Sbjct: 242 PMQPAMYQNTQGGNAGDSDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRC 301
Query: 314 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWN-AGYYGY---- 368
GFVQ+A+R+ AE AL +LNGTQLGGQ+IRLSWGRSP+ QPD QWN GYYGY
Sbjct: 302 GFVQYANRATAEHALSVLNGTQLGGQSIRLSWGRSPNK---QPDQAQWNGGGYYGYPPQP 358
Query: 369 AQGYENYGYAAAAPQDPS 386
GYE YGYAA QDP+
Sbjct: 359 QGGYEPYGYAAQPNQDPN 376
>gi|242033859|ref|XP_002464324.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
gi|241918178|gb|EER91322.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
Length = 409
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/359 (62%), Positives = 264/359 (73%), Gaps = 16/359 (4%)
Query: 52 PPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAV 111
PPAMW A P E RTLWIGDLQYWMDE YL +CF+ GEV++V
Sbjct: 43 PPAMWGQPPPQAAPAPAPAPSGGG-AGDEARTLWIGDLQYWMDENYLYSCFSQAGEVISV 101
Query: 112 KVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DD 170
K+IRNKQTGQ EGYGFIEF + A AE+VLQ +NG MPN Q F+LNWA+ GAGEKR DD
Sbjct: 102 KIIRNKQTGQPEGYGFIEFGNHALAEQVLQNYNGQMMPNVNQPFKLNWATSGAGEKRGDD 161
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
D+TIFVGDLA+DVTD++LQ+TF++RYPS K AKVV DR TGR+KGYGFV+F D EQ
Sbjct: 162 GSDYTIFVGDLASDVTDFILQDTFKSRYPSVKSAKVVFDRTTGRSKGYGFVKFADLDEQT 221
Query: 231 RAMTEMNGVFCSTRPMRIGPATNKKTV-------SASYQNSQVAQSDDDP--NNTTVFVG 281
RAMTEMNG +CS+RPMR+GPA+NKK S YQN+Q SD DP TTVFVG
Sbjct: 222 RAMTEMNGQYCSSRPMRLGPASNKKNTGGQPQPSSTIYQNTQGTDSDSDPNN--TTVFVG 279
Query: 282 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
LD VTDE L++ FS YG+L++VKIP GKRCGFVQ+++R+ AEEA+RMLNG+QLGGQ+I
Sbjct: 280 GLDPSVTDELLKQTFSPYGELLYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQSI 339
Query: 342 RLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYEN-YGYAAAAPQDPSMY-YGGYPGYGNY 398
RLSWGRSP+NKQ Q + NQW+ G Y + YGY A PQDP+MY Y YPGYGNY
Sbjct: 340 RLSWGRSPANKQPQQEQNQWSGGGYYGYPQGYDPYGY-ARPPQDPAMYAYTPYPGYGNY 397
>gi|9758270|dbj|BAB08769.1| unnamed protein product [Arabidopsis thaliana]
Length = 390
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/327 (64%), Positives = 253/327 (77%), Gaps = 12/327 (3%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
+ Q G ++++LWIGDLQ WMDE Y+ + FA +GE + KVIRNK TGQ EGYGFI
Sbjct: 47 GIGSQNPGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFI 106
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT--PDHTIFVGDLAADVT 186
EF+S + AERVLQT+NG PMP+ EQ FRLNWA GAGEKR T PDHTIFVGDLA +VT
Sbjct: 107 EFVSHSVAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVT 166
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
DYML +TF+ Y S KGAKVV+DR TGR+KGYGFVRF DE+EQ+RAMTEMNG +CSTRPM
Sbjct: 167 DYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPM 226
Query: 247 RIGPATNKKTV---SASYQNSQVAQS-DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 302
RIGPA NK + A YQN+Q A + D+DPNNTT+FVG LD+ VTD+ L+ +F Q+G+L
Sbjct: 227 RIGPAANKNALPMQPAMYQNTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGEL 286
Query: 303 VHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWN 362
+HVKIP GKRCGFVQ+A+++ AE AL +LNGTQLGGQ+IRLSWGRSP NKQ+ D QWN
Sbjct: 287 LHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSP-NKQS--DQAQWN 343
Query: 363 -AGYYGY-AQGYENYGYAAAAP-QDPS 386
GYYGY Q YGYAA P QDP+
Sbjct: 344 GGGYYGYPPQPQGGYGYAAQPPTQDPN 370
>gi|18423684|ref|NP_568815.1| RNA-binding protein 45A [Arabidopsis thaliana]
gi|75334165|sp|Q9FPJ8.1|RB45A_ARATH RecName: Full=Polyadenylate-binding protein RBP45A;
Short=Poly(A)-binding protein RBP45A; AltName:
Full=RNA-binding protein 45A; Short=AtRBP45A
gi|11762114|gb|AAG40335.1|AF324983_1 AT5g54900 [Arabidopsis thaliana]
gi|119360145|gb|ABL66801.1| At5g54900 [Arabidopsis thaliana]
gi|332009171|gb|AED96554.1| RNA-binding protein 45A [Arabidopsis thaliana]
Length = 387
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/327 (64%), Positives = 253/327 (77%), Gaps = 12/327 (3%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
+ Q G ++++LWIGDLQ WMDE Y+ + FA +GE + KVIRNK TGQ EGYGFI
Sbjct: 47 GIGSQNPGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFI 106
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT--PDHTIFVGDLAADVT 186
EF+S + AERVLQT+NG PMP+ EQ FRLNWA GAGEKR T PDHTIFVGDLA +VT
Sbjct: 107 EFVSHSVAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVT 166
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
DYML +TF+ Y S KGAKVV+DR TGR+KGYGFVRF DE+EQ+RAMTEMNG +CSTRPM
Sbjct: 167 DYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPM 226
Query: 247 RIGPATNKKTV---SASYQNSQVAQS-DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 302
RIGPA NK + A YQN+Q A + D+DPNNTT+FVG LD+ VTD+ L+ +F Q+G+L
Sbjct: 227 RIGPAANKNALPMQPAMYQNTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGEL 286
Query: 303 VHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWN 362
+HVKIP GKRCGFVQ+A+++ AE AL +LNGTQLGGQ+IRLSWGRSP NKQ+ D QWN
Sbjct: 287 LHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSP-NKQS--DQAQWN 343
Query: 363 -AGYYGY-AQGYENYGYAAAAP-QDPS 386
GYYGY Q YGYAA P QDP+
Sbjct: 344 GGGYYGYPPQPQGGYGYAAQPPTQDPN 370
>gi|297799290|ref|XP_002867529.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
gi|297313365|gb|EFH43788.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
Length = 418
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/316 (63%), Positives = 241/316 (76%), Gaps = 10/316 (3%)
Query: 52 PPAMWATQAAAPQAAGVAVPPQQQ------GQPGEIRTLWIGDLQYWMDETYLNTCFAHT 105
PPA W Q+A G GEIR+LWIGDLQ WM+E YL F+ T
Sbjct: 45 PPAGWNQQSAPSPGQPQQQQYGGGGGSQNPGSAGEIRSLWIGDLQPWMEENYLMNIFSLT 104
Query: 106 GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAG 165
G+ + KVIRNKQ+G EGYGFIEF++ A AER+LQ +NGT MP+ +Q FRLNWA GAG
Sbjct: 105 GDATSAKVIRNKQSGYSEGYGFIEFVNHATAERILQAYNGTTMPSSDQAFRLNWAQLGAG 164
Query: 166 EKRD-DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFG 224
E+R + P+HT+FVGDLA DVTD+ML ETF+A Y S KGAKVV DR TGR+KGYGFVRFG
Sbjct: 165 ERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVTDRTTGRSKGYGFVRFG 224
Query: 225 DESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS---ASYQNSQVAQSDDDPNNTTVFVG 281
DESEQ+RAMTEMNG +CS+RPMR GPA NKK ++ ASYQN+Q Q + DP NTT+FVG
Sbjct: 225 DESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQPASYQNTQGNQGESDPTNTTIFVG 284
Query: 282 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
LD V ++ L+ +F Q+G+LVHVKIPAGKRCGFVQ+A+R+CAE+AL +LNGTQLGGQ+I
Sbjct: 285 ALDQSVIEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSLLNGTQLGGQSI 344
Query: 342 RLSWGRSPSNKQAQPD 357
RLSWGRSPSNKQ QPD
Sbjct: 345 RLSWGRSPSNKQTQPD 360
>gi|18416906|ref|NP_567764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331668|sp|Q93W34.1|RP45C_ARATH RecName: Full=Polyadenylate-binding protein RBP45C;
Short=Poly(A)-binding protein RBP45C; AltName:
Full=RNA-binding protein 45C; Short=AtRBP45C
gi|13878153|gb|AAK44154.1|AF370339_1 putative DNA binding protein [Arabidopsis thaliana]
gi|15450814|gb|AAK96678.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17104569|gb|AAL34173.1| putative DNA binding protein [Arabidopsis thaliana]
gi|20259888|gb|AAM13291.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332659882|gb|AEE85282.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 415
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/315 (64%), Positives = 238/315 (75%), Gaps = 9/315 (2%)
Query: 52 PPAMWATQAAAPQAAGVAVPPQQQ-----GQPGEIRTLWIGDLQYWMDETYLNTCFAHTG 106
PPA W Q+A G GEIR+LWIGDLQ WMDE YL F TG
Sbjct: 45 PPAGWNQQSAPSSGQPQQQQYGGGGSQNPGSAGEIRSLWIGDLQPWMDENYLMNVFGLTG 104
Query: 107 EVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGE 166
E A KVIRNKQ G EGYGFIEF++ A AER LQT+NG PMP+ EQ FRLNWA GAGE
Sbjct: 105 EATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQTYNGAPMPSSEQAFRLNWAQLGAGE 164
Query: 167 KRD-DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGD 225
+R + P+HT+FVGDLA DVTD+ML ETF+A Y S KGAKVV DR TGR+KGYGFVRF D
Sbjct: 165 RRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFAD 224
Query: 226 ESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS---ASYQNSQVAQSDDDPNNTTVFVGN 282
ESEQ+RAMTEMNG +CS+RPMR GPA NKK ++ ASYQN+Q + DP NTT+FVG
Sbjct: 225 ESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQPASYQNTQGNSGESDPTNTTIFVGA 284
Query: 283 LDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+D VT++ L+ +F Q+G+LVHVKIPAGKRCGFVQ+A+R+CAE+AL +LNGTQLGGQ+IR
Sbjct: 285 VDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQSIR 344
Query: 343 LSWGRSPSNKQAQPD 357
LSWGRSPSNKQ QPD
Sbjct: 345 LSWGRSPSNKQTQPD 359
>gi|4455223|emb|CAB36546.1| putative DNA binding protein [Arabidopsis thaliana]
gi|7269553|emb|CAB79555.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 427
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/315 (64%), Positives = 238/315 (75%), Gaps = 9/315 (2%)
Query: 52 PPAMWATQAAAPQAAGVAVPPQQQ-----GQPGEIRTLWIGDLQYWMDETYLNTCFAHTG 106
PPA W Q+A G GEIR+LWIGDLQ WMDE YL F TG
Sbjct: 45 PPAGWNQQSAPSSGQPQQQQYGGGGSQNPGSAGEIRSLWIGDLQPWMDENYLMNVFGLTG 104
Query: 107 EVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGE 166
E A KVIRNKQ G EGYGFIEF++ A AER LQT+NG PMP+ EQ FRLNWA GAGE
Sbjct: 105 EATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQTYNGAPMPSSEQAFRLNWAQLGAGE 164
Query: 167 KRD-DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGD 225
+R + P+HT+FVGDLA DVTD+ML ETF+A Y S KGAKVV DR TGR+KGYGFVRF D
Sbjct: 165 RRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFAD 224
Query: 226 ESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS---ASYQNSQVAQSDDDPNNTTVFVGN 282
ESEQ+RAMTEMNG +CS+RPMR GPA NKK ++ ASYQN+Q + DP NTT+FVG
Sbjct: 225 ESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQPASYQNTQGNSGESDPTNTTIFVGA 284
Query: 283 LDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+D VT++ L+ +F Q+G+LVHVKIPAGKRCGFVQ+A+R+CAE+AL +LNGTQLGGQ+IR
Sbjct: 285 VDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQSIR 344
Query: 343 LSWGRSPSNKQAQPD 357
LSWGRSPSNKQ QPD
Sbjct: 345 LSWGRSPSNKQTQPD 359
>gi|2708532|gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
Length = 482
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/355 (59%), Positives = 259/355 (72%), Gaps = 25/355 (7%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q Q + +T+WIGDLQ WMDE+YL++CF+ GEV++VK+IRNKQTGQ E YGF+EF
Sbjct: 127 PTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEF 186
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYM 189
+ A AE+VLQ++NGT MPN EQ FRLNWA F GEKR +T D +IFVGDLA+DVTD M
Sbjct: 187 NTHAAAEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTM 246
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
L++TF +RYPS KGAKVV+D TG +KGYGFVRFGDESE+ RAMTEMNGV+CS+R MRIG
Sbjct: 247 LRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIG 306
Query: 250 PATNKK------------TVSASYQNSQVA----QSDDDPNNTTVFVGNLDSIVTDEHLR 293
AT KK +S Y ++ A QSD D +NTT+FVG LDS VTDE LR
Sbjct: 307 VATPKKPSAQQQYSSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELR 366
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
+ F+Q+G++V VKIPAGK CGFVQF+DRS A+EA++ L+G +G Q +RLSWGRSP+NKQ
Sbjct: 367 QSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQ 426
Query: 354 AQPDP-NQWNAGYYGYAQGYENYGYAAAAPQDPSMY-----YGGYP-GYGNYQQP 401
+ D +QWN GY G Q Y YGY A+ QD MY YG GYGN+QQP
Sbjct: 427 MRADSGSQWNGGYNG-RQNYGGYGYGASQNQDSGMYATGAAYGASSNGYGNHQQP 480
>gi|212722596|ref|NP_001131852.1| uncharacterized protein LOC100193230 [Zea mays]
gi|194692726|gb|ACF80447.1| unknown [Zea mays]
gi|413919585|gb|AFW59517.1| hypothetical protein ZEAMMB73_768040 [Zea mays]
Length = 434
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/336 (63%), Positives = 252/336 (75%), Gaps = 21/336 (6%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMD+ Y+ CF++TGEV VK+IR+K +GQ++GYGF+EF SRA AERV
Sbjct: 84 EVRTLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERV 143
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NG MPN + FRLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFR YP
Sbjct: 144 LQTYNGQMMPNVDLTFRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYP 201
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S KGAKVV D+LT RTKGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA ++K
Sbjct: 202 SVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNAGG 261
Query: 260 SYQ----NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGF 315
Q NSQ AQS++DPNNTT+FVG LD VT++ L++ FS YG+++HVKIP GKRCGF
Sbjct: 262 VVQERVPNSQGAQSENDPNNTTIFVGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGKRCGF 321
Query: 316 VQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP--DPNQWNAG--------- 364
VQF R AE+AL ML G +G QN+RLSWGRS SNKQ QP + QW AG
Sbjct: 322 VQFVTRPSAEQALLMLQGALIGAQNVRLSWGRSLSNKQTQPQQESMQWGAGAPAGVGDYY 381
Query: 365 -YYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNY 398
YG GY A PQDP+MY YG Y GY NY
Sbjct: 382 GGYGQGYEAYGSGY--AQPQDPNMYGYGAYVGYPNY 415
>gi|413919584|gb|AFW59516.1| hypothetical protein ZEAMMB73_768040, partial [Zea mays]
Length = 428
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/336 (63%), Positives = 252/336 (75%), Gaps = 21/336 (6%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMD+ Y+ CF++TGEV VK+IR+K +GQ++GYGF+EF SRA AERV
Sbjct: 84 EVRTLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERV 143
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NG MPN + FRLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFR YP
Sbjct: 144 LQTYNGQMMPNVDLTFRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYP 201
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S KGAKVV D+LT RTKGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA ++K
Sbjct: 202 SVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNAGG 261
Query: 260 SYQ----NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGF 315
Q NSQ AQS++DPNNTT+FVG LD VT++ L++ FS YG+++HVKIP GKRCGF
Sbjct: 262 VVQERVPNSQGAQSENDPNNTTIFVGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGKRCGF 321
Query: 316 VQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP--DPNQWNAG--------- 364
VQF R AE+AL ML G +G QN+RLSWGRS SNKQ QP + QW AG
Sbjct: 322 VQFVTRPSAEQALLMLQGALIGAQNVRLSWGRSLSNKQTQPQQESMQWGAGAPAGVGDYY 381
Query: 365 -YYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNY 398
YG GY A PQDP+MY YG Y GY NY
Sbjct: 382 GGYGQGYEAYGSGY--AQPQDPNMYGYGAYVGYPNY 415
>gi|326495566|dbj|BAJ85879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 479
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/406 (56%), Positives = 273/406 (67%), Gaps = 19/406 (4%)
Query: 3 QPAPGAVPPPPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAA 62
QP A+P PP AA +Q P Q P P+ + PP P QP A + A
Sbjct: 83 QPHWVAMPFAPPGAAAMVVPHQMAPAPPHQFAPHFVPFHAVAPPPPPLQPRVGVAMGSPA 142
Query: 63 PQAAGVAVPPQQQGQPG--EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTG 120
P A QPG E +T+W+GDL YWMDE YL+TCF +TGEVVA+KVIRNKQTG
Sbjct: 143 PAA-----------QPGQEENKTIWVGDLHYWMDENYLHTCFGYTGEVVAIKVIRNKQTG 191
Query: 121 QIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVG 179
Q EGYGF+EF S A AE+VL F G MPN +Q FR+NWASF G++R D DH+IFVG
Sbjct: 192 QSEGYGFVEFYSHAAAEKVLDGFAGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVG 251
Query: 180 DLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV 239
DLA+DV D L ETF +RY S KGAKVVID TGR+KGYGFVRFGD+SE+ AMTEMNGV
Sbjct: 252 DLASDVNDTALLETFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKTNAMTEMNGV 311
Query: 240 FCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQY 299
+CSTRPMRIGPAT +K+ S A+SD D NTTVFVG LD V+++ L++ FSQY
Sbjct: 312 YCSTRPMRIGPATPRKSSGTSGSTGSSARSDGDLTNTTVFVGGLDPNVSEDDLKQTFSQY 371
Query: 300 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP- 358
G++ VKIP GK+CGFVQF R AE+AL+ LNG+ +G Q +RLSWGR+P+NKQ + D
Sbjct: 372 GEISSVKIPVGKQCGFVQFLQRKNAEDALQGLNGSTIGKQTVRLSWGRNPANKQLRSDNG 431
Query: 359 NQWNAG-YYGYAQGYENYGYAAAAPQDPSMY---YGGYPGYGNYQQ 400
NQWN G YY + Y YGY AA DP MY YG YP YGN QQ
Sbjct: 432 NQWNNGMYYAPSPFYNGYGYPAAPFPDPGMYAAAYGAYPLYGNQQQ 477
>gi|449513289|ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
RBP47B'-like [Cucumis sativus]
Length = 427
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/352 (59%), Positives = 258/352 (73%), Gaps = 33/352 (9%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYW+DE+YLN+CFAHTGEV+++K+IRNK TGQ EGYGF+EF+S A AER+
Sbjct: 18 EVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERI 77
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQT+NGT MP EQ FRLNWASFG GE+R D P+H+IFVGDLA DVTDY+LQETFRA+Y
Sbjct: 78 LQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQY 137
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK--- 255
PS +GAKVV D TGR+KGYGFV+F DE+E+ RAM+EMNG +CSTRPMRI AT KK
Sbjct: 138 PSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGXYCSTRPMRISAATPKKPLV 197
Query: 256 ----TVSASYQNSQ-------------VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQ 298
TV N++ V +D D NNTT+FVGNLD +T+E L++ F Q
Sbjct: 198 FSSNTVXVKVMNNESMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQ 257
Query: 299 YGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA---- 354
+G++ +VKIPAGK CGFVQF R+ AEEA++ + G +G Q +R SWGR+P+ KQ
Sbjct: 258 FGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDLTTW 317
Query: 355 --QPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNYQQPQQ 403
Q DPNQW+A YYGY Y+ YGY QDPS+Y YG Y GY +Y PQQ
Sbjct: 318 GQQVDPNQWSA-YYGYGGTYDAYGYGVV--QDPSLYGYGAYSGYASY--PQQ 364
>gi|359492062|ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 409
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/363 (58%), Positives = 260/363 (71%), Gaps = 6/363 (1%)
Query: 43 MMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF 102
MMPPQ Q + Q Q QQQG + RT+W+GDL WMDE YL++CF
Sbjct: 45 MMPPQHYPQHFVAYHHQPHQYQHQHQQQHQQQQGSNADNRTIWVGDLHNWMDENYLHSCF 104
Query: 103 AHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF 162
A TGE+ ++KVIRNKQTG EGYGF+EF S A AE+VLQ + G MPN +Q FRLNWA+F
Sbjct: 105 AATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQGYAGVLMPNTDQPFRLNWATF 164
Query: 163 GAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFV 221
G+KR D PD +IFVGDLA+DV+D +L ETF +YPS K AKVV D TGR+KGYGFV
Sbjct: 165 SMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFV 224
Query: 222 RFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVG 281
RFGDE+E+ +AMTEMNGV+CS+RPMRIG AT +K+ Q S QSD D NTT+FVG
Sbjct: 225 RFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHVQSDGDSMNTTIFVG 284
Query: 282 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
LD V+DE LR+ FSQYG++V VKIP GK CGFVQFA+R+ AE+AL+ LNGT +G Q +
Sbjct: 285 GLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQTV 344
Query: 342 RLSWGRSPSNKQAQPD-PNQWNAGYYGYAQGYENYGYAAAAPQDPSMY---YGGYPGYGN 397
RLSWGR+P+NKQ + D NQW+ YYG Q Y+ YGYA P DP+MY YG YP YGN
Sbjct: 345 RLSWGRNPANKQMRADFGNQWSGAYYG-GQVYDGYGYALPPPHDPTMYAAAYGAYPVYGN 403
Query: 398 YQQ 400
+QQ
Sbjct: 404 HQQ 406
>gi|255544854|ref|XP_002513488.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223547396|gb|EEF48891.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 412
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/364 (59%), Positives = 261/364 (71%), Gaps = 34/364 (9%)
Query: 65 AAGVAVPPQQQGQPG---EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQ 121
AA A P QP E+RTLWIGDLQYW+DE YL++CFAHTGEV+++K+IRNK TGQ
Sbjct: 2 AAPTATNPGGYHQPATLEEVRTLWIGDLQYWVDENYLSSCFAHTGEVLSIKIIRNKITGQ 61
Query: 122 IEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGD 180
EGYGF+EF+S AER+LQT+NGT MP EQ FRLNWASFG GE+R D P+H+IFVGD
Sbjct: 62 PEGYGFVEFVSHVAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGD 121
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L+ DVTDY+LQETFRA YPS +GAKVV D TGR+KGYGFV+FGDE+E+ RAMTEMNGVF
Sbjct: 122 LSPDVTDYLLQETFRANYPSVRGAKVVTDPNTGRSKGYGFVKFGDENERNRAMTEMNGVF 181
Query: 241 CSTRPMRIGPATNKKTVSASYQNS-----------------QVAQSDDDPNNTTVFVGNL 283
CSTRPMRI AT KKT A+YQ QV +D+D NTT+FVGNL
Sbjct: 182 CSTRPMRISAATPKKT--AAYQQQYATAKAIYPLPAYTAPVQVVPADNDITNTTIFVGNL 239
Query: 284 DSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRL 343
D VT+E LR +F Q+G++V+VKIP G+ CGFVQFA R+ AEEA++ + G +G Q +R+
Sbjct: 240 DPNVTEEELRPIFLQFGEIVYVKIPVGRGCGFVQFATRASAEEAIQRMQGHVIGQQPVRI 299
Query: 344 SWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNYQQPQ 402
SWGR + D QW+A YYGY QGY+ Y Y A QDPS+Y YG Y GY PQ
Sbjct: 300 SWGRKQARSTLILD--QWSA-YYGYGQGYDAYAYGAT--QDPSLYAYGAYAGY-----PQ 349
Query: 403 QPQQ 406
PQQ
Sbjct: 350 YPQQ 353
>gi|226492692|ref|NP_001144988.1| uncharacterized protein LOC100278143 [Zea mays]
gi|195649537|gb|ACG44236.1| hypothetical protein [Zea mays]
Length = 436
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/383 (58%), Positives = 269/383 (70%), Gaps = 21/383 (5%)
Query: 28 PPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIG 87
PP Q P P+ + PP+ Q+ P A+ A P Q GQ E +++W+G
Sbjct: 63 PPPQFAPTHFVPFHAVAPPRAQSVPAAVALGSPA----------PHQPGQE-ENKSVWVG 111
Query: 88 DLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTP 147
DL YWMDE YL++CF +TGEVVA+KVIRNKQTGQ EGYGF+EF S A AE+VL+ F+G
Sbjct: 112 DLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFSGHI 171
Query: 148 MPNGEQNFRLNWASFGAGEKRDD-TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKV 206
MPN +Q FRLNWASF G++R D DH+IFVGDLA+DV D L E F +RY S KGAKV
Sbjct: 172 MPNTDQPFRLNWASFSMGDRRSDAASDHSIFVGDLASDVNDATLLEAFSSRYSSVKGAKV 231
Query: 207 VIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQV 266
VID TGR+KGYGFVRFGD+SE+ +AMTEMNGV+CS+RPMRIGPAT +K+ S N
Sbjct: 232 VIDANTGRSKGYGFVRFGDDSEKTQAMTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSA 291
Query: 267 AQSD-DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAE 325
A+SD D NTTVFVG LD V++E LR+ FSQYG++ VKIP GK+CGFVQFA R AE
Sbjct: 292 ARSDGGDLTNTTVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCGFVQFAQRKNAE 351
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAG--YYGYAQGYENYGYAAAAP 382
+AL+ LNG+ +G QN+RLSWGR+P+NKQ + D NQWN G YY Y YGY AAAP
Sbjct: 352 DALQGLNGSTIGKQNVRLSWGRNPANKQFRGDNGNQWNNGGMYYAAPPFYNGYGYPAAAP 411
Query: 383 -QDPSMY----YGGYPGYGNYQQ 400
DP MY YG YP YGN QQ
Sbjct: 412 FPDPGMYAAPAYGAYPFYGNQQQ 434
>gi|224286528|gb|ACN40970.1| unknown [Picea sitchensis]
Length = 430
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/337 (61%), Positives = 254/337 (75%), Gaps = 25/337 (7%)
Query: 74 QQGQP---GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
QQ QP E++TLW+GDLQ+WMDE YL+TCF+HTGE+V+ K+IRNK TGQ EGYGF+EF
Sbjct: 81 QQHQPQSSDEVKTLWVGDLQFWMDEGYLHTCFSHTGELVSAKIIRNKYTGQSEGYGFMEF 140
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYM 189
I+R AE+++QT+NGT MPN EQ FR+NWA+F GE+R D PD +IFVGDL +DV+D +
Sbjct: 141 ITRTAAEKIMQTYNGTLMPNTEQVFRMNWATFSMGERRLDGGPDFSIFVGDLDSDVSDLV 200
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
LQETF++RY S K AKVV+D TGR+KGYGFVRFG+ESE+ RAMTEMNGV+CSTRPMRI
Sbjct: 201 LQETFQSRYSSVKAAKVVMDANTGRSKGYGFVRFGEESERARAMTEMNGVYCSTRPMRIS 260
Query: 250 PATNKKTVSASYQNSQVAQ----------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQY 299
AT +K+ +Q S A SD+D NNTT+FVG LD TDE LR++F QY
Sbjct: 261 AATPRKSAGVQHQYSGRAGNGGSHAQGFPSDNDLNNTTIFVGRLDPNATDEDLRQVFGQY 320
Query: 300 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK------- 352
G+LV VKIP GK CGFVQF +R+ AEEAL+ L+GT + Q +RLSWGRSP+NK
Sbjct: 321 GELVSVKIPVGKGCGFVQFGNRASAEEALQRLHGTVIRQQTVRLSWGRSPANKQQPQPQG 380
Query: 353 -QAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY 388
Q Q DPNQWN YYG QGYE+YGY A PQDP+MY
Sbjct: 381 QQPQSDPNQWNGAYYG--QGYESYGY-APPPQDPAMY 414
>gi|75334879|sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
Short=Poly(A)-binding protein RBP47; AltName:
Full=RNA-binding protein 47; Short=NplRBP47
gi|9663769|emb|CAC01238.1| RNA Binding Protein 47 [Nicotiana plumbaginifolia]
Length = 428
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/355 (59%), Positives = 258/355 (72%), Gaps = 25/355 (7%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q Q + +T+WIGDLQ WMDE+YL++CF+ GEV++VK+IRNKQTGQ E YGF+EF
Sbjct: 73 PTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEF 132
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYM 189
+ A AE+VLQ++NGT MPN EQ FRLNWA F GEKR +T D +IFVGDLA+DVTD M
Sbjct: 133 NTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTM 192
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
L++TF +RYPS KGAKVV+D TG +KGYGFVRFGDESE+ RAMTEMNGV+CS+R MRIG
Sbjct: 193 LRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIG 252
Query: 250 PATNKK------------TVSASYQNSQVA----QSDDDPNNTTVFVGNLDSIVTDEHLR 293
AT KK +S Y ++ A QSD D +NTT+FVG LDS VTDE LR
Sbjct: 253 VATPKKPSAHEQYSSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELR 312
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
+ F+Q+G++V VKIPAGK CGFVQF+DRS A+EA++ L+G +G Q +RLSWGRSP+NKQ
Sbjct: 313 QSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQ 372
Query: 354 AQPDP-NQWNAGYYGYAQGYENYGYAAAAPQDPSMY-----YGGYPG-YGNYQQP 401
+ D +QWN GY G Q Y YGY A+ QD MY YG YGN+QQP
Sbjct: 373 MRTDSGSQWNGGYNG-RQNYGGYGYGASQNQDSGMYATGAAYGASSNRYGNHQQP 426
>gi|255538402|ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223550967|gb|EEF52453.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 443
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/335 (61%), Positives = 248/335 (74%), Gaps = 15/335 (4%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E RT+WIGDL +WMDE YL+TCFA TGE+V++KVIRNKQTG EGYGF+EF + A AE+V
Sbjct: 107 ENRTVWIGDLHHWMDENYLHTCFASTGEIVSIKVIRNKQTGLSEGYGFVEFYTHATAEKV 166
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARY 198
LQ + G MPN EQ FRLNWA+F G+KR D+ PD +IFVGDLAADVTD +L ETF +RY
Sbjct: 167 LQNYAGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLHETFVSRY 226
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS K AKVV D TGR+KGYGFVRFGD++E+ +AMTEMNGV+CS+R MRIG AT +K+
Sbjct: 227 PSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTEMNGVYCSSRAMRIGAATPRKSTG 286
Query: 259 ASYQNSQVA--------QSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG 310
+Q V+ Q+D D NTT+FVG LD VTDE L++ FSQYG++V VKIP G
Sbjct: 287 YQHQGGYVSNGASGQAFQADGDSTNTTIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVG 346
Query: 311 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP--NQWNAGYYGY 368
K CGFVQFA RS AEEAL+ LNGT +G Q +RLSWGR+P+NKQ NQW YYG
Sbjct: 347 KGCGFVQFASRSNAEEALQKLNGTVIGKQTVRLSWGRNPANKQQLRSDFGNQWGGAYYG- 405
Query: 369 AQGYENYGYAAAAPQDPSMY---YGGYPGYGNYQQ 400
Q Y+ YGYA P DPSMY YG YP YG++QQ
Sbjct: 406 GQIYDGYGYALPPPHDPSMYAAPYGAYPVYGSHQQ 440
>gi|224284226|gb|ACN39849.1| unknown [Picea sitchensis]
Length = 429
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/336 (61%), Positives = 255/336 (75%), Gaps = 24/336 (7%)
Query: 74 QQGQP---GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
QQ QP E++TLW+GDLQ+WMDE YL+TCF+HTGE+V+ K+IRNK TGQ EGYGF+EF
Sbjct: 81 QQHQPQSSDEVKTLWVGDLQFWMDEGYLHTCFSHTGELVSAKIIRNKYTGQSEGYGFMEF 140
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYM 189
I+R AE+++QT+NGT MPN EQ FR+NWA+F GE+R D PD +IFVGDL +DV+D +
Sbjct: 141 ITRTAAEKIMQTYNGTLMPNTEQVFRMNWATFSMGERRLDGGPDFSIFVGDLDSDVSDLV 200
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
LQETF++RY S K AKVV+D TGR+KGYGFVRFG+ESE+ RAMTEMNGV+CSTRPMRI
Sbjct: 201 LQETFQSRYSSVKAAKVVMDANTGRSKGYGFVRFGEESERARAMTEMNGVYCSTRPMRIS 260
Query: 250 PATNKKTVSASYQ---------NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 300
AT +K+ +Q ++Q SD+D NNTT+FVG LD TDE LR++F QYG
Sbjct: 261 AATPRKSAGVQHQYSGRGNGGSHAQGFPSDNDLNNTTIFVGRLDPNATDEDLRQVFGQYG 320
Query: 301 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK-------- 352
+LV VKIP GK CGFVQF +R+ AEEAL+ L+GT + Q +RLSWGRSP+NK
Sbjct: 321 ELVSVKIPVGKGCGFVQFGNRASAEEALQRLHGTVIRQQTVRLSWGRSPANKQQPQPQGQ 380
Query: 353 QAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY 388
Q Q DPNQWN YYG QGYE+YGY A PQDP+MY
Sbjct: 381 QPQSDPNQWNGAYYG--QGYESYGY-APPPQDPAMY 413
>gi|357158812|ref|XP_003578248.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 431
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/412 (55%), Positives = 271/412 (65%), Gaps = 22/412 (5%)
Query: 4 PAPGAVPPPP--------PPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAM 55
P A+ PPP PP AA Q AP PPQ +P+ + PP +
Sbjct: 25 PTVAALAPPPHWVAMPFAPPGAAAMVMPHQMAPA----PPQFAPHFVPFHAVAAPPPPPL 80
Query: 56 WATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIR 115
A A G P QG E +T+W+GDL YWMDE YL++CF +TGEVVA+KVIR
Sbjct: 81 QPRPAPVAVALG---SPAAQGGQEENKTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIR 137
Query: 116 NKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDH 174
NKQTGQ EGYGF+EF S A AE+VL F G MPN +Q FR+NWASF G++R D DH
Sbjct: 138 NKQTGQSEGYGFVEFYSHAAAEKVLDGFAGHIMPNTDQPFRINWASFSMGDRRSDIASDH 197
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+IFVGDLA+DV D L E F +RY S KGAKVVID TGR+KGYGFVRFGD+SE+ AMT
Sbjct: 198 SIFVGDLASDVNDATLLEIFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKTHAMT 257
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
EMNGV+CSTRPMRIGPAT +K+ S A+SD D NTTVFVG LD V+++ LR+
Sbjct: 258 EMNGVYCSTRPMRIGPATPRKSSGNSGSTGSSARSDGDLTNTTVFVGGLDPNVSEDDLRQ 317
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 354
FSQYG++ VKIP GK+CGFVQF R AE+AL+ LNG+ +G Q +RLSWGR+P+NKQ
Sbjct: 318 SFSQYGEISSVKIPVGKQCGFVQFLQRKNAEDALQGLNGSTIGKQTVRLSWGRNPANKQL 377
Query: 355 QPDP-NQWNAG-YYGYAQGYENYGYAAAAPQDPSMY----YGGYPGYGNYQQ 400
+ D NQWN G YY + Y YGY AA DP MY YG YP YGN QQ
Sbjct: 378 RSDNGNQWNNGMYYAASPFYNGYGYPAAPFPDPGMYTAAAYGAYPFYGNQQQ 429
>gi|414886904|tpg|DAA62918.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 484
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/337 (62%), Positives = 251/337 (74%), Gaps = 16/337 (4%)
Query: 79 GEIRTLWIGDLQYWMDETYL--NTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
GE+RTLWIGDLQ+WMDE YL N A ++ +VK+IRNKQTG EGYGFIEF SRA A
Sbjct: 111 GEVRTLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGYGFIEFYSRAAA 170
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFR 195
E L FNG MPN E F+LNWAS G+KR D+ D TIFVGDLA DVTD ML++ FR
Sbjct: 171 EHTLMNFNGQMMPNVEMTFKLNWASASTGDKRGDSGSDRTIFVGDLAHDVTDSMLEDVFR 230
Query: 196 ARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255
A+YPS +GA VV+DR+TG KG+GFVRFGD +EQ RAMTEMNG+ STR MRIG A NKK
Sbjct: 231 AKYPSVRGANVVVDRMTGWPKGFGFVRFGDLNEQARAMTEMNGMLLSTRQMRIGAAANKK 290
Query: 256 TVSA--------SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 307
A +YQ+S+ S++DPNNTTVFVG LDS V +E+LR++F+ YG++ +VKI
Sbjct: 291 NRDAQQTYATDGAYQSSKGNSSENDPNNTTVFVGGLDSNVNEEYLRQIFTPYGEISYVKI 350
Query: 308 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA-QPDP-NQWNA-G 364
P GK CGFVQF RSCAEEA+RMLNG+Q+GGQ +RLSWGRSP N+QA Q D NQ+N
Sbjct: 351 PVGKHCGFVQFTSRSCAEEAIRMLNGSQVGGQKVRLSWGRSPQNRQASQHDANNQYNGNS 410
Query: 365 YYGYAQ-GYENYGYAAAAPQDPSM-YYGGYPGYGNYQ 399
YYGY Q GYE YGY A++ QDPSM Y GY G GNY+
Sbjct: 411 YYGYQQPGYEGYGYGASSAQDPSMQNYYGYSGCGNYE 447
>gi|222629596|gb|EEE61728.1| hypothetical protein OsJ_16246 [Oryza sativa Japonica Group]
Length = 607
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/381 (57%), Positives = 262/381 (68%), Gaps = 31/381 (8%)
Query: 26 QAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLW 85
Q PPQ AA E++TLW
Sbjct: 4 QPPPQAHYGQ---------------------VPPPQPYYAAPPPQAMPAPAAADEVKTLW 42
Query: 86 IGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNG 145
IGDLQ WMDE+Y+ CFA TGEV +VK+IR+KQ+GQ++GYGF+EF SRA A+R+LQT+NG
Sbjct: 43 IGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQTYNG 102
Query: 146 TPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAK 205
MPN E FRLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFR YPS KGAK
Sbjct: 103 QMMPNVEMVFRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAK 160
Query: 206 VVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT--VSASYQN 263
VV D++T R+KGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA NKKT V N
Sbjct: 161 VVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGVQERVPN 220
Query: 264 SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSC 323
+Q AQS++DPNNTT+FVG LD VT++ L+++F+ YG++VHVKIP GKRCGFVQ+ +R
Sbjct: 221 AQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPS 280
Query: 324 AEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQW-----NAGYYGYAQGYENYGYA 378
AE+AL +L GT +GGQN+RLSWGRS SNKQ Q D NQW GYYG
Sbjct: 281 AEQALAVLQGTLIGGQNVRLSWGRSLSNKQPQHDSNQWGAGAGAGGYYGGYGQGYEAYGG 340
Query: 379 AAAPQDPSMY-YGGYPGYGNY 398
A PQDP+MY YG Y GY NY
Sbjct: 341 YAQPQDPNMYGYGAYAGYPNY 361
>gi|82621116|gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]
Length = 423
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/345 (60%), Positives = 252/345 (73%), Gaps = 27/345 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+WIGDLQ WMDE YL+TCFA GEV++VKVIRNKQTGQ E YGFIEF + AE+VLQ
Sbjct: 79 RTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQ 138
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDT-------PDHTIFVGDLAADVTDYMLQETF 194
++NGT MPN EQ FRLNW++F GEKR D D +IFVGDLA+DVTD ML++TF
Sbjct: 139 SYNGTMMPNAEQPFRLNWSAFSTGEKRADVGAAAGSGSDLSIFVGDLASDVTDTMLRDTF 198
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+RYPS KGAKVVID TGR+KGYGFVRF DESE+ RAMTEMNG++CS+R MRIG AT K
Sbjct: 199 SSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIGVATPK 258
Query: 255 K-TVSASYQN----------SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
K + Y + +Q +Q+D D +NTTVFVG LDS VTDE LR+ FSQ+G +V
Sbjct: 259 KPSAMQQYSSQGGHASNGAATQTSQTDSDLSNTTVFVGGLDSDVTDEELRQSFSQFGNVV 318
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWN 362
VKIPAGK CGFVQF++RS AE+A+ LNGT +G Q +RLSWGR+P+NKQ + D +QWN
Sbjct: 319 SVKIPAGKGCGFVQFSERSAAEDAIEKLNGTVIGTQTVRLSWGRNPANKQFRTDSGSQWN 378
Query: 363 AGYYGYAQGYENYGYAAAAPQDPSMYYGGYP------GYGNYQQP 401
GYYG Q Y YGY A+ QD SMY G GYGN++Q
Sbjct: 379 GGYYG-RQNYGGYGYGASQSQD-SMYGAGAAHGASSNGYGNHEQS 421
>gi|226491568|ref|NP_001142233.1| uncharacterized protein LOC100274401 [Zea mays]
gi|194707728|gb|ACF87948.1| unknown [Zea mays]
gi|414886903|tpg|DAA62917.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 465
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/337 (62%), Positives = 251/337 (74%), Gaps = 16/337 (4%)
Query: 79 GEIRTLWIGDLQYWMDETYL--NTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
GE+RTLWIGDLQ+WMDE YL N A ++ +VK+IRNKQTG EGYGFIEF SRA A
Sbjct: 111 GEVRTLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGYGFIEFYSRAAA 170
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFR 195
E L FNG MPN E F+LNWAS G+KR D+ D TIFVGDLA DVTD ML++ FR
Sbjct: 171 EHTLMNFNGQMMPNVEMTFKLNWASASTGDKRGDSGSDRTIFVGDLAHDVTDSMLEDVFR 230
Query: 196 ARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255
A+YPS +GA VV+DR+TG KG+GFVRFGD +EQ RAMTEMNG+ STR MRIG A NKK
Sbjct: 231 AKYPSVRGANVVVDRMTGWPKGFGFVRFGDLNEQARAMTEMNGMLLSTRQMRIGAAANKK 290
Query: 256 TVSA--------SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 307
A +YQ+S+ S++DPNNTTVFVG LDS V +E+LR++F+ YG++ +VKI
Sbjct: 291 NRDAQQTYATDGAYQSSKGNSSENDPNNTTVFVGGLDSNVNEEYLRQIFTPYGEISYVKI 350
Query: 308 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA-QPDP-NQWNA-G 364
P GK CGFVQF RSCAEEA+RMLNG+Q+GGQ +RLSWGRSP N+QA Q D NQ+N
Sbjct: 351 PVGKHCGFVQFTSRSCAEEAIRMLNGSQVGGQKVRLSWGRSPQNRQASQHDANNQYNGNS 410
Query: 365 YYGYAQ-GYENYGYAAAAPQDPSM-YYGGYPGYGNYQ 399
YYGY Q GYE YGY A++ QDPSM Y GY G GNY+
Sbjct: 411 YYGYQQPGYEGYGYGASSAQDPSMQNYYGYSGCGNYE 447
>gi|222640040|gb|EEE68172.1| hypothetical protein OsJ_26296 [Oryza sativa Japonica Group]
Length = 329
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/312 (67%), Positives = 246/312 (78%), Gaps = 8/312 (2%)
Query: 93 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE 152
MDE ++ CFA TGE+ +VK+IR+KQTGQ++GYGFIEF S AGAERVLQT+NG MPN E
Sbjct: 1 MDENTVSACFAPTGELQSVKLIRDKQTGQLQGYGFIEFTSHAGAERVLQTYNGAMMPNVE 60
Query: 153 QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLT 212
Q +RLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFR YPS KGAKVV D++T
Sbjct: 61 QTYRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYILQETFRVHYPSVKGAKVVTDKMT 118
Query: 213 GRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT--VSASYQNSQVAQSD 270
R+KGYGFV+FGD SEQ RAMTEMNG+ CS+RPMRIGPA NKK V ++Q QSD
Sbjct: 119 MRSKGYGFVKFGDPSEQARAMTEMNGMVCSSRPMRIGPAANKKATGVQEKVPSAQGVQSD 178
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRM 330
DP+NTT+FVG LD VTD+ L+++F+ YG +VHVKIP GKRCGFVQFA+R+ A+EAL +
Sbjct: 179 SDPSNTTIFVGGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRCGFVQFANRASADEALVL 238
Query: 331 LNGTQLGGQNIRLSWGRSPSNKQAQP--DPNQW-NAGYYGYAQGYENYGYAAAAPQDPSM 387
L GT +GGQN+RLSWGRSPSN+QAQP D NQW A Y G GY A PQDP+M
Sbjct: 239 LQGTLIGGQNVRLSWGRSPSNRQAQPQQDSNQWGGANAGYYGYGQGYEGYGYAQPQDPNM 298
Query: 388 Y-YGGYPGYGNY 398
Y YG Y GY NY
Sbjct: 299 YGYGAYAGYPNY 310
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 17/148 (11%)
Query: 16 MAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAM----WATQAAAPQAAGVAVP 71
M + Y + + P +Q M+ +P PA Q P A GV
Sbjct: 119 MRSKGYGFVKFGDPSEQARAMTEMNGMVCSSRPMRIGPAANKKATGVQEKVPSAQGV--- 175
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
Q P T+++G L + + L F G+VV VK+ K+ GF++F
Sbjct: 176 -QSDSDPSNT-TIFVGGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRC------GFVQFA 227
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNW 159
+RA A+ L GT + G QN RL+W
Sbjct: 228 NRASADEALVLLQGTLI--GGQNVRLSW 253
>gi|449446975|ref|XP_004141245.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449498692|ref|XP_004160607.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 426
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/384 (55%), Positives = 267/384 (69%), Gaps = 29/384 (7%)
Query: 38 SPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQ--QGQPGEIRTLWIGDLQYWMDE 95
+P M PP P PP + + P Q +G E +T+W+GDL +WMDE
Sbjct: 43 TPQHYMAPPLP---PPY--MHYHHQYHHHHLPIQPSQPLKGSGSENKTIWVGDLHHWMDE 97
Query: 96 TYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNF 155
+YL++CF+ GE+ ++KVIRNKQTG EGYGF+EF+S AE+VLQ ++G MP+ EQ F
Sbjct: 98 SYLHSCFSSVGEISSMKVIRNKQTGLSEGYGFVEFLSHTTAEKVLQNYSGMFMPSTEQTF 157
Query: 156 RLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGR 214
RLNWA+F G+KR D+ PD +IFVGDLAADVTD +L ETF +++PS K AKVVID TGR
Sbjct: 158 RLNWATFSTGDKRSDNDPDLSIFVGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGR 217
Query: 215 TKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQN----------- 263
+KGYGFVRFGD++E+ +AMTEMNG++CS+RPMRIG AT +K S+ YQ
Sbjct: 218 SKGYGFVRFGDDNERSQAMTEMNGIYCSSRPMRIGAATPRK--SSGYQQQHSSQGGGYST 275
Query: 264 ----SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFA 319
SQ QS+ D NTT+FVG LD VTDE LR+ FSQYG++V VKIP GK CGFVQFA
Sbjct: 276 NGYFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFA 335
Query: 320 DRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAA 379
+R+ AEEAL+ LNGT +G Q +RLSWGR+P+NKQ + NQWN YYG Y+ YGY
Sbjct: 336 NRNDAEEALQKLNGTVIGKQTVRLSWGRNPANKQFRDFGNQWNGAYYG-GHIYDGYGYGL 394
Query: 380 AAPQDPSMY---YGGYPGYGNYQQ 400
A+P DPSMY YG Y YGN+QQ
Sbjct: 395 ASPHDPSMYHAAYGAYTVYGNHQQ 418
>gi|350536139|ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum]
gi|40804404|gb|AAR91698.1| DNA-binding protein [Solanum lycopersicum]
Length = 428
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/350 (59%), Positives = 254/350 (72%), Gaps = 32/350 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+WIGDLQ WMDE YL+TCFA GEV++VKVIRNKQTGQ E YGFIEF + AE+VLQ
Sbjct: 79 RTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQ 138
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDT-------PDHTIFVGDLAADVTDYMLQETF 194
++NGT MPN EQ FRLNW++F +GEKR D D +IFVGDLA+DVTD ML++TF
Sbjct: 139 SYNGTMMPNAEQPFRLNWSAFSSGEKRADVGAGAGSGSDLSIFVGDLASDVTDTMLRDTF 198
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+RYPS KGAKVVID TGR+KGYGFVRF DESE+ RAMTEMNG++CS+R MRIG AT K
Sbjct: 199 SSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIGVATPK 258
Query: 255 K------------TVSASYQN----SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQ 298
K ++ + + +Q +Q+D D +NTTVFVG LDS VTDE LR+ FSQ
Sbjct: 259 KPSPMQQYFPQAVILAGGHASNGAATQTSQTDSDLSNTTVFVGGLDSEVTDEELRQSFSQ 318
Query: 299 YGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP 358
+G +V VKIPAGK CGFVQF++RS AE+A+ LNGT +G Q +RLSWGR+P+NKQ + D
Sbjct: 319 FGNVVSVKIPAGKGCGFVQFSERSAAEDAIEKLNGTVIGAQTVRLSWGRNPANKQFRTDS 378
Query: 359 -NQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYP------GYGNYQQP 401
+QWN GYYG Q Y YGY A+ QD SMY G GYGN++Q
Sbjct: 379 GSQWNGGYYG-RQNYGGYGYGASQSQD-SMYGAGAAHGASSNGYGNHEQS 426
>gi|115479619|ref|NP_001063403.1| Os09g0462700 [Oryza sativa Japonica Group]
gi|113631636|dbj|BAF25317.1| Os09g0462700, partial [Oryza sativa Japonica Group]
Length = 441
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/335 (61%), Positives = 247/335 (73%), Gaps = 7/335 (2%)
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
P+ GQ E +T+W+GDL YWMDE YL++CF +TGEVVA+KVIRNKQTGQ EGYGF+EF
Sbjct: 106 PRGGGQE-ENKTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFY 164
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYML 190
S A AE+VL+ F G MPN +Q FR+NWASF G++R D DH+IFVGDLA+DV D L
Sbjct: 165 SHAAAEKVLEGFAGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTTL 224
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
ETF RY S KGAKVVID TGR+KGYGFVRFGD++E+ AMTEMNGV+CSTRPMRIGP
Sbjct: 225 LETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGP 284
Query: 251 ATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG 310
AT +KT S A+SD D NTTVFVG LD V+++ LR+ FSQYG++ VKIP G
Sbjct: 285 ATPRKTSGTSGPTGSAARSDGDLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVG 344
Query: 311 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAG-YYGY 368
K+CGFVQF R AE+AL+ LNG+ +G Q +RLSWGR+P+NKQ + D +QWN G YY
Sbjct: 345 KQCGFVQFVQRKNAEDALQGLNGSTIGKQTVRLSWGRNPANKQLRSDNGSQWNNGMYYAA 404
Query: 369 AQGYENYGYAAAAPQDPSMY---YGGYPGYGNYQQ 400
+ Y YGY A P DP MY YG YP YGN QQ
Sbjct: 405 SPFYSGYGYPAPFPADPGMYAAAYGAYPFYGNQQQ 439
>gi|215765810|dbj|BAG87507.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 345
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/325 (62%), Positives = 242/325 (74%), Gaps = 6/325 (1%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+T+W+GDL YWMDE YL++CF +TGEVVA+KVIRNKQTGQ EGYGF+EF S A AE+VL+
Sbjct: 19 KTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLE 78
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPS 200
F G MPN +Q FR+NWASF G++R D DH+IFVGDLA+DV D L ETF RY S
Sbjct: 79 GFAGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSS 138
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
KGAKVVID TGR+KGYGFVRFGD++E+ AMTEMNGV+CSTRPMRIGPAT +KT S
Sbjct: 139 VKGAKVVIDANTGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGPATPRKTSGTS 198
Query: 261 YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFAD 320
A+SD D NTTVFVG LD V+++ LR+ FSQYG++ VKIP GK+CGFVQF
Sbjct: 199 GPTGSAARSDGDLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQ 258
Query: 321 RSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAG-YYGYAQGYENYGYA 378
R AE+AL+ LNG+ +G Q +RLSWGR+P+NKQ + D +QWN G YY + Y YGY
Sbjct: 259 RKNAEDALQGLNGSTIGKQTVRLSWGRNPANKQLRSDNGSQWNNGMYYAASPFYSGYGYP 318
Query: 379 AAAPQDPSMY---YGGYPGYGNYQQ 400
A P DP MY YG YP YGN QQ
Sbjct: 319 APFPADPGMYAAAYGAYPFYGNQQQ 343
>gi|293336608|ref|NP_001168401.1| uncharacterized protein LOC100382170 [Zea mays]
gi|223948043|gb|ACN28105.1| unknown [Zea mays]
gi|414585352|tpg|DAA35923.1| TPA: hypothetical protein ZEAMMB73_028165 [Zea mays]
Length = 432
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/288 (68%), Positives = 234/288 (81%), Gaps = 8/288 (2%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMDE Y+ CF++TGEV VK+IR+K +GQ++GYGF+EF SRA AERV
Sbjct: 90 EVRTLWIGDLQYWMDENYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERV 149
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NG MPN + FRLNWAS AGEKRDDTP++TIFVGDLAADVTDY+LQETFR YP
Sbjct: 150 LQTYNGQMMPNVDLTFRLNWAS--AGEKRDDTPEYTIFVGDLAADVTDYLLQETFRVHYP 207
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S KGAKVV D+LT RTKGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA ++K
Sbjct: 208 SVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNTGG 267
Query: 260 SYQ----NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGF 315
Q NSQ AQS++DPNNTT+FVG LD VT++ L+++FS YG++VHVKIP GKRCGF
Sbjct: 268 VVQERVPNSQGAQSENDPNNTTIFVGGLDPNVTEDTLKQVFSPYGEVVHVKIPVGKRCGF 327
Query: 316 VQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP--DPNQW 361
VQF R AE+AL ML G +G QN+RLSWGRS SNKQAQP + NQW
Sbjct: 328 VQFVTRPSAEQALLMLQGALIGAQNVRLSWGRSLSNKQAQPQQESNQW 375
>gi|356562301|ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 401
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/401 (55%), Positives = 269/401 (67%), Gaps = 20/401 (4%)
Query: 12 PPPPMAAHQYQYQQQAPPQQQPPPQ-PSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAV 70
PPPP Q A PQQ P Q P+ M+MP PP +A P A
Sbjct: 6 PPPPR-----QSPAVARPQQWVPMQYPAAAAMVMPHH--MLPPQHYAPPPYVPYHHQYAA 58
Query: 71 PPQQQ---GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGF 127
PQ Q G GE +T+WIGDL +WMDE YL+ CFA TGE+ ++KVIRNKQTG EGYGF
Sbjct: 59 QPQHQHQNGSGGENKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGF 118
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEK-RDDTPDHTIFVGDLAADVT 186
+EF S A AE+VLQ + G MPN EQ FRLNWA+F G+K D+ PD +IFVGDLAADVT
Sbjct: 119 VEFYSHATAEKVLQNYAGILMPNAEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVT 178
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
D +L ETF + YPS K AKVV D TGR+KGYGFVRFGD++E+ +AMT+MNGV+CS+RPM
Sbjct: 179 DSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTQMNGVYCSSRPM 238
Query: 247 RIGPATNKKTVS---ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
RIG AT +K+ N QS+ D NTT+FVG LD V+DE LR+ FSQYG++V
Sbjct: 239 RIGAATPRKSSGHQQGGLSNGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIV 298
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ-WN 362
VKIP GK CGFVQFA+R+ AEEAL+ LNGT +G Q +RLSWGR+P+NKQ + D W
Sbjct: 299 SVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGSPWT 358
Query: 363 AGYYGYAQGYENYGYAAAAPQDPSMY---YGGYPGYGNYQQ 400
YYG A Y+ YGYA DPS+Y YG YP YG +QQ
Sbjct: 359 GAYYG-APMYDGYGYALPPRHDPSIYAAAYGAYPLYGGHQQ 398
>gi|224067280|ref|XP_002302445.1| predicted protein [Populus trichocarpa]
gi|222844171|gb|EEE81718.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/390 (55%), Positives = 265/390 (67%), Gaps = 27/390 (6%)
Query: 35 PQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQ---------QQGQPGEIRTLW 85
P + M MPPQ PP A A ++G G+ +T+
Sbjct: 40 PVAAMVMQHMPPQHYGLPPPQHYMAATAYHQYQHHHHLPHVQQQQQQQREGSSGDNKTIC 99
Query: 86 IGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNG 145
IGDL +WMDE YL+TCFA TGE+ ++KVIR+KQTG EGYGF+EF + A AE+VLQ + G
Sbjct: 100 IGDLHHWMDENYLHTCFASTGEIASIKVIRSKQTGLSEGYGFVEFFTHATAEKVLQNYGG 159
Query: 146 TPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
MPN EQ FRLNWA+F G+KR D+TPD +IFVGDLAADVTD +LQETF ++Y S K A
Sbjct: 160 ILMPNTEQPFRLNWATFSTGDKRSDNTPDLSIFVGDLAADVTDSLLQETFASKYQSVKSA 219
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ-- 262
KVV D TGR+KGYGFVRFGD++E+ +AMTEMNGV+CS+RPMRIG AT +K S+ YQ
Sbjct: 220 KVVFDANTGRSKGYGFVRFGDDTERTQAMTEMNGVYCSSRPMRIGAATPRK--SSGYQQQ 277
Query: 263 --------NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
+SQ QSD D +N T+FVG LD VTDE L++ FSQYG++V VKIP K CG
Sbjct: 278 GGYGSNGASSQGFQSDGDSSNATIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVSKGCG 337
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ-WNAGYYGYAQGYE 373
FVQFA+R+ AEEAL+ LNGT +G Q +RLSWGR+P +KQ + D + WN YYG Q Y+
Sbjct: 338 FVQFANRNNAEEALQKLNGTVIGKQTVRLSWGRNPGHKQHRADFSSPWNGAYYG-GQVYD 396
Query: 374 NYGYAAAAPQDPSMY---YGGYPGYGNYQQ 400
YGYA P DPS Y YG YP YGN+QQ
Sbjct: 397 GYGYALPPPHDPSTYAAAYGAYPMYGNHQQ 426
>gi|194707750|gb|ACF87959.1| unknown [Zea mays]
gi|414885794|tpg|DAA61808.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 433
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/339 (62%), Positives = 254/339 (74%), Gaps = 11/339 (3%)
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
P Q GQ E +++W+GDL YWMDE YL++CF +TGEVVA+KVIRNKQTGQ EGYGF+EF
Sbjct: 94 PHQPGQE-ENKSVWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFY 152
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYML 190
S A AE+VL+ F+G MPN +Q FRLNWASF G++R D+ DH+IFVGDLA+DV D L
Sbjct: 153 SHAAAEKVLEGFSGHIMPNTDQPFRLNWASFSMGDRRSDSASDHSIFVGDLASDVNDATL 212
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
E F +RY S KGAKVVID TGR+KGYGFVRFGD+SE+ +AMTEMNGV+CS+RPMRIGP
Sbjct: 213 LEAFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKTQAMTEMNGVYCSSRPMRIGP 272
Query: 251 ATNKKTVSASYQNSQVAQSD-DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 309
AT +K+ S N A+SD D NTTVFVG LD V++E LR+ FSQYG++ VKIP
Sbjct: 273 ATPRKSSGTSGSNGSAARSDGGDLTNTTVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPI 332
Query: 310 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAG--YY 366
GK+CGFVQFA R AE+AL+ LNG+ +G QN+RLSWGR+P+NKQ + D NQWN G YY
Sbjct: 333 GKQCGFVQFAQRKNAEDALQGLNGSTIGKQNVRLSWGRNPANKQFRGDNGNQWNNGGMYY 392
Query: 367 GYAQGYENYGYAAAAP-QDPSMY----YGGYPGYGNYQQ 400
Y YGY AAAP DP MY YG YP YGN QQ
Sbjct: 393 AAPPFYNGYGYPAAAPFPDPGMYAAPAYGAYPFYGNQQQ 431
>gi|356521484|ref|XP_003529385.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/327 (62%), Positives = 238/327 (72%), Gaps = 23/327 (7%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
EIRT+W+GDL +WMDE YL+ CFAHTGEVV+ KVIRNKQTGQ EGYGF+EF SRA AE+V
Sbjct: 99 EIRTVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRATAEKV 158
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQETFRAR 197
LQ +NGT MPN +Q FRLNWA+F AGE+R D T D +IFVGDLA DVTD MLQETF R
Sbjct: 159 LQNYNGTMMPNTDQAFRLNWATFSAGERRSSDATSDLSIFVGDLAIDVTDAMLQETFAGR 218
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
Y S KGAKVVID TGR+KGYGFVRFGDE+E+ RAMTEMNGV+CS+RPMRIG AT KKT
Sbjct: 219 YSSIKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRPMRIGVATPKKTY 278
Query: 258 SASYQ--------------NSQVAQ---SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 300
Q N VAQ S+ D NNTT+FVG LDS +DE LR+ F Q+G
Sbjct: 279 GYQQQYSSQAVLLAGGHAANGAVAQGSHSEGDLNNTTIFVGGLDSDTSDEDLRQPFLQFG 338
Query: 301 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ 360
++V VKIP GK CGFVQFADR AEEA+ LNGT +G Q +RLSWGRSP NK + D
Sbjct: 339 EVVSVKIPVGKGCGFVQFADRKNAEEAIHALNGTVIGKQTVRLSWGRSPGNKHWRSDS-- 396
Query: 361 WNAGYYGYAQGYENYGYAAAAPQDPSM 387
N GY+G Q Y +G+A QD +M
Sbjct: 397 -NGGYFG-GQSYGGHGFAVRQNQDIAM 421
>gi|224137382|ref|XP_002327112.1| predicted protein [Populus trichocarpa]
gi|222835427|gb|EEE73862.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/346 (60%), Positives = 256/346 (73%), Gaps = 21/346 (6%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
QQ+ GE +T+WIGDL +WMDE YL++CF TGE+ ++KVIRNKQTG EGYGF+EF++
Sbjct: 84 QQREGSGENKTIWIGDLHHWMDENYLHSCFVSTGEIASIKVIRNKQTGLSEGYGFVEFLT 143
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQ 191
A AE+VLQ + G MPN EQ FRLNWA+F G+KR D+ PD +IFVGDLAADVTD +LQ
Sbjct: 144 HATAEKVLQNYGGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLQ 203
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
ETF ++YPS K AKVV D TGR+KGYGFVRFGD+SE+ +AMTEMNGV+CS+RPMRIG A
Sbjct: 204 ETFVSKYPSVKAAKVVFDANTGRSKGYGFVRFGDDSERTQAMTEMNGVYCSSRPMRIGAA 263
Query: 252 TNKKTVSASYQ----------NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQ 301
T +K S+ YQ ++Q QSD D NNTT+FVG LD VTDE L++ FSQYG+
Sbjct: 264 TPRK--SSGYQQQGGYGSNGASAQGFQSDGDSNNTTIFVGGLDPNVTDEDLKQPFSQYGE 321
Query: 302 LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ- 360
+V VKIP GK CGFVQFA+R AEEAL+ LNGT +G Q +RLSWGR+P+NKQ + D
Sbjct: 322 IVSVKIPVGKGCGFVQFANRDNAEEALQKLNGTVIGKQTVRLSWGRNPANKQFRADFGSP 381
Query: 361 WNAGYYGYAQGYENYGYAAAAPQDPSM------YYGGYPGYGNYQQ 400
WN YYG Q Y+ YGYA P DPSM YG YP YG++QQ
Sbjct: 382 WNGAYYG-GQVYDGYGYALPPPHDPSMYAAAAAAYGAYPIYGSHQQ 426
>gi|116788528|gb|ABK24911.1| unknown [Picea sitchensis]
Length = 397
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/335 (62%), Positives = 247/335 (73%), Gaps = 28/335 (8%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVV-AVKVIRNKQTGQIEGYGFIEFISRAGAER 138
EI+TLW+GDLQYWMDE YL TCF+ GEVV +VK+IRNKQTGQ EGYGF+E SRA AER
Sbjct: 49 EIKTLWVGDLQYWMDENYLQTCFSSNGEVVVSVKIIRNKQTGQPEGYGFVELDSRASAER 108
Query: 139 VLQTFNGTPMPNGEQNFRLNWASFGAGEKRDD-TPDHTIFVGDLAADVTDYMLQETFRAR 197
+LQT +GTPMPN FRLNWA+FGAG++R + ++IFVGDL +V D +LQETF++R
Sbjct: 109 ILQTLHGTPMPNSPHPFRLNWATFGAGDRRTEPGTGYSIFVGDLGPEVIDILLQETFQSR 168
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
Y S K AKVVID TGRTKGYGFVRFGDE+E+ RAMTEMNGV+C +RPMRI AT KK++
Sbjct: 169 YSSVKSAKVVIDANTGRTKGYGFVRFGDENEKNRAMTEMNGVYCCSRPMRINEATPKKSL 228
Query: 258 SASYQNS----------------QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQ 301
S Q QSD+DPNNTT+FVG LD TDE LR++F +G+
Sbjct: 229 GLQQSYSMKGNYYTQAYGGAVAGQGFQSDNDPNNTTIFVGGLDPNATDEDLRQVFGPFGE 288
Query: 302 LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA------- 354
+V+VKIP GK CGFVQF +RS AEEAL+ L+GT +G Q+IRLSWGRSP+NKQ
Sbjct: 289 IVYVKIPVGKGCGFVQFTNRSSAEEALQKLHGTIIGQQSIRLSWGRSPANKQTASWGVQP 348
Query: 355 QPDPNQWNAG--YYGYAQGYENYGYAAAAPQDPSM 387
QPDPNQWN G YY Y QGYE YGYA A QDP+M
Sbjct: 349 QPDPNQWNGGGAYYSYGQGYEAYGYAPPA-QDPTM 382
>gi|357116772|ref|XP_003560152.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 470
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/334 (63%), Positives = 248/334 (74%), Gaps = 15/334 (4%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTG--EVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
+IR+LWIGDLQYWMDE YL+ FA G +V +VK+IRNKQTGQ EGYGFIEF SRA AE
Sbjct: 112 DIRSLWIGDLQYWMDEAYLHNAFAPMGPQQVASVKIIRNKQTGQPEGYGFIEFHSRAAAE 171
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRA 196
L +FNG MPN + F+LNWAS AG++R DD DHTIFVGDLA+DVTD MLQE F+A
Sbjct: 172 YALASFNGHAMPNVDLPFKLNWASASAGDRRGDDGSDHTIFVGDLASDVTDSMLQEIFKA 231
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK- 255
YPS +GA VV DR TGR+KGYGFVRFGD +EQ RAMTEMNGV S+R +RIGPA NKK
Sbjct: 232 SYPSVRGANVVTDRATGRSKGYGFVRFGDVNEQTRAMTEMNGVTLSSRQLRIGPAANKKN 291
Query: 256 -----TVSASYQNSQVAQSDD---DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 307
T S + SQ +Q +D DPNNTT+FVG LDS + + +LR++F+ YG++ +VKI
Sbjct: 292 MGTQQTYSTNGYQSQSSQGNDVQNDPNNTTIFVGGLDSNIDENYLRQVFTPYGEVGYVKI 351
Query: 308 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA-QPDPNQWN-AGY 365
P GKRCGFVQF RSCAEEA+ LNGT +GG N+RLSWGRS NKQA Q D NQ N + Y
Sbjct: 352 PVGKRCGFVQFTSRSCAEEAINALNGTPIGGNNVRLSWGRSTQNKQAPQQDANQGNGSNY 411
Query: 366 YGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQ 399
YGY QG + Y Y A QDPSM GY GYGNY+
Sbjct: 412 YGYQQGNDAY-YGAPNAQDPSMQNYGYSGYGNYE 444
>gi|356550323|ref|XP_003543537.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 410
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/353 (59%), Positives = 253/353 (71%), Gaps = 27/353 (7%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
QQ E+RTLWIGDLQYW+DE YL+ CF HTGEV+++K+IRNK TGQ EGYGF+EF+S
Sbjct: 5 QQASTIEEVRTLWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVS 64
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQ 191
A AERVLQT+NGT MP +Q FRLNWASFG GE+R D P+H+IFVGDLA DVTDY+LQ
Sbjct: 65 HAAAERVLQTYNGTQMPATDQTFRLNWASFGIGERRPDAAPEHSIFVGDLAPDVTDYLLQ 124
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
ETFRA YPS +GAKVV D T R+KGYGFV+F DE+E+ RAMTEMNGV+CSTRPMRI A
Sbjct: 125 ETFRAHYPSVRGAKVVTDPNTARSKGYGFVKFSDENERNRAMTEMNGVYCSTRPMRISAA 184
Query: 252 TNKKTVSA----------------SYQN--SQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
T KKT A +Y + QV D D NNTT+FVGNLD V++E L+
Sbjct: 185 TPKKTTGAYAAPAAPVPKPVYPVPAYTSPVVQVQPPDYDVNNTTIFVGNLDLNVSEEELK 244
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
+ Q+G++V VKI GK GFVQF R+ AEEA++ + G +G Q +R+SWGR+ + +Q
Sbjct: 245 QNSLQFGEIVSVKIQPGKGFGFVQFGTRASAEEAIQKMQGKMIGQQVVRISWGRTLTARQ 304
Query: 354 AQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNYQQPQQPQ 405
DPNQW+A YYGY QGYE Y Y A DPS+Y YG YPGY Y PQQ +
Sbjct: 305 M--DPNQWSA-YYGYGQGYEAYAYGPA--HDPSLYAYGAYPGYAQY--PQQVE 350
>gi|1899188|gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
Length = 428
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/356 (58%), Positives = 256/356 (71%), Gaps = 27/356 (7%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q Q + +T+WIGDLQ WMDE+YL++CF+ GEV++VK+IRNKQTGQ E YGF+EF
Sbjct: 73 PTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEF 132
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYM 189
+ A AE+VLQ++NGT MPN EQ FRLNWA F GEKR +T D +IFVGDLA+DVTD M
Sbjct: 133 NTHAAAEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTM 192
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
L++TF +RYPS KGAKVV+D TG +KGYGFVRFGDESE+ RAMTEMNGV+CS+R MRIG
Sbjct: 193 LRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIG 252
Query: 250 PATNKK------------TVSASYQNSQVA----QSDDDPNNTTVFVGNLDSIVTDEHLR 293
AT KK +S Y ++ A QSD D +NTT+FVG LDS VTDE LR
Sbjct: 253 VATPKKPSAQQQYSSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELR 312
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
+ F+Q+G++V VKIPAGK CGFVQF+DRS A+EA++ L+G +G Q +RLSWGR+ +NKQ
Sbjct: 313 QSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRT-ANKQ 371
Query: 354 AQPDP-NQWNAGYYGYAQGYENYGYAAAAPQDPSM-------YYGGYPGYGNYQQP 401
+ D +QWN GY G Q Y YGY A+ QD M Y GYGN+QQP
Sbjct: 372 MRADSGSQWNGGYNGR-QNYGGYGYGASQNQDSGMYATGAAAYGASSNGYGNHQQP 426
>gi|356552180|ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 425
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/407 (54%), Positives = 268/407 (65%), Gaps = 20/407 (4%)
Query: 13 PPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAM-WATQAAAPQAAGVAVP 71
PPP + QQ P Q P M+PPQ A PP + + Q A VP
Sbjct: 17 PPPRQSPAVARPQQWLPMQYPAAAMVMPHHMLPPQHYAPPPYVPFHHHHHHHQYAAPHVP 76
Query: 72 ----------PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQ 121
Q G GE +T+WIGDL +WMDE YL+ CFA TGE+ ++KVIRNKQTG
Sbjct: 77 NQHQQQQQHHHHQNGSGGENKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGL 136
Query: 122 IEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEK-RDDTPDHTIFVGD 180
EGYGF+EF S A AE+VLQ + G MPN EQ FRLNWA+F G+K D+ PD +IFVGD
Sbjct: 137 SEGYGFVEFYSHATAEKVLQNYAGILMPNTEQPFRLNWATFSTGDKGSDNVPDLSIFVGD 196
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
LAADVTD +L ETF + YPS K AKVV D TGR+KGYGFVRFGD++++ +AMT+MNGV+
Sbjct: 197 LAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNQRTQAMTQMNGVY 256
Query: 241 CSTRPMRIGPATNKKTVS---ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 297
CS+RPMRIG AT +K+ N QS+ D NTT+FVG LD V+DE LR+ FS
Sbjct: 257 CSSRPMRIGAATPRKSSGHQQGGQSNGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFS 316
Query: 298 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD 357
QYG++V VKIP GK CGFVQFA+R+ AEEAL+ LNGT +G Q +RLSWGR+P+NKQ + D
Sbjct: 317 QYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTSIGKQTVRLSWGRNPANKQFRMD 376
Query: 358 -PNQWNAGYYGYAQGYENYGYAAAAPQDPSMY---YGGYPGYGNYQQ 400
N W YYG A Y+ YGYA DPS+Y YG YP YG +QQ
Sbjct: 377 FGNPWTGAYYG-APMYDGYGYALTPRHDPSIYAAAYGAYPLYGGHQQ 422
>gi|30682335|ref|NP_849641.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332190644|gb|AEE28765.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 306
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/328 (65%), Positives = 243/328 (74%), Gaps = 30/328 (9%)
Query: 1 MMQPAPGAVPP--PPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWAT 58
M QP PG + P PPP A QY YQQ PP PP MW
Sbjct: 2 MQQPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPP----------------PPQMWNP 45
Query: 59 QAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ 118
QAAAP P Q EIRTLWIGDLQYWMDE +L CFAHTGE+V+ KVIRNKQ
Sbjct: 46 QAAAP-------PSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQ 98
Query: 119 TGQIEGYGFIEFISRAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTPDHTIF 177
TGQ+EGYGFIEF S A AERVLQTFN P+P+ +Q FRLNWAS +G+KRDD+PD+TIF
Sbjct: 99 TGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDSPDYTIF 158
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDLAADVTDY+L ETFRA YPS KGAKVVIDR+TGRTKGYGFVRF DESEQ+RAMTEMN
Sbjct: 159 VGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMN 218
Query: 238 GVFCSTRPMRIGPATNKKTVSA---SYQNSQV-AQSDDDPNNTTVFVGNLDSIVTDEHLR 293
GV CSTRPMRIGPA +KK V+ SYQ+S +D+DPNNTTVFVG LD+ VTD+HL+
Sbjct: 219 GVPCSTRPMRIGPAASKKGVTGQRDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLK 278
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADR 321
+FSQYG++VHVKIPAGKRCGFVQF+++
Sbjct: 279 NVFSQYGEIVHVKIPAGKRCGFVQFSEK 306
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 16/197 (8%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GDL + + L F A AKV+ ++ TG+ +GYGF+ F + R +
Sbjct: 63 TLWIGDLQYWMDENFLYGCF-AHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQ 121
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
N P+ P+ + ++ + DD + T+FVG+L + VTD L E
Sbjct: 122 TFNNA-----PI---PSFPDQLFRLNWASLSSGDKRDDSPDYTIFVGDLAADVTDYILLE 173
Query: 295 LF-----SQYGQLVHVKIPAG--KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
F S G V + G K GFV+F+D S A+ +NG + +R+
Sbjct: 174 TFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAA 233
Query: 348 SPSNKQAQPDPNQWNAG 364
S Q D Q +A
Sbjct: 234 SKKGVTGQRDSYQSSAA 250
>gi|359492060|ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 418
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/391 (55%), Positives = 264/391 (67%), Gaps = 32/391 (8%)
Query: 39 PYMM-------------MMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLW 85
+M MMPPQ Q + Q Q QQQG + RT+W
Sbjct: 28 QWMAMQYPAAAMVMQHQMMPPQHYPQHFVAYHHQPHQYQHQHQQQHQQQQGSNADNRTIW 87
Query: 86 IGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNG 145
+GDL WMDE YL++CFA TGE+ ++KVIRNKQTG EGYGF+EF S A AE+VLQ + G
Sbjct: 88 VGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQGYAG 147
Query: 146 TPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
MPN +Q FRLNWA+F G+KR D PD +IFVGDLA+DV+D +L ETF +YPS K A
Sbjct: 148 VLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAA 207
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ-- 262
KVV D TGR+KGYGFVRFGDE+E+ +AMTEMNGV+CS+RPMRIG AT +K S+ YQ
Sbjct: 208 KVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRK--SSGYQQQ 265
Query: 263 ---------NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 313
N QSD D NTT+FVG LD V+DE LR+ FSQYG++V VKIP GK C
Sbjct: 266 YSSHGGYASNGASVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGC 325
Query: 314 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD-PNQWNAGYYGYAQGY 372
GFVQFA+R+ AE+AL+ LNGT +G Q +RLSWGR+P+NKQ + D NQW+ YYG Q Y
Sbjct: 326 GFVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYG-GQVY 384
Query: 373 ENYGYAAAAPQDPSMY---YGGYPGYGNYQQ 400
+ YGYA P DP+MY YG YP YGN+QQ
Sbjct: 385 DGYGYALPPPHDPTMYAAAYGAYPVYGNHQQ 415
>gi|224104133|ref|XP_002313332.1| predicted protein [Populus trichocarpa]
gi|222849740|gb|EEE87287.1| predicted protein [Populus trichocarpa]
Length = 415
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/345 (59%), Positives = 244/345 (70%), Gaps = 26/345 (7%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYW DE+YL +CFAHTGEVV++K+IRNK TGQ EGYGF+EF+S A AER+
Sbjct: 18 EVRTLWIGDLQYWADESYLTSCFAHTGEVVSIKIIRNKLTGQPEGYGFVEFVSHAAAERI 77
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQT+NGT MP EQ FRLNWASFG GE+R D P+H+IFVGDLA DVTDY+LQETFR Y
Sbjct: 78 LQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRVHY 137
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS +GAKVV D TGR+KGYGFV+F DE+E+ RAMTEMNGVFCSTRPMRI AT KKT S
Sbjct: 138 PSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVFCSTRPMRISMATPKKTTS 197
Query: 259 ASYQNS---------------QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
Q + QV +D D NTT+FVGNLD T+E LR+ F Q G++
Sbjct: 198 FQQQYAVPKAFYPAPAYTAPVQVVSADGDVTNTTIFVGNLDPNATEEDLRQTFLQLGEIA 257
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS-NKQAQPDPNQWN 362
VKIPAG+ CGFVQFA R+ AEEA++ + G +G Q +R+SWG+ +QWN
Sbjct: 258 SVKIPAGRGCGFVQFATRTSAEEAIQRMQGHVIGQQPVRISWGKKQDLTATWGQQVDQWN 317
Query: 363 AGYYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNYQQPQQPQQ 406
A YYGY QGY+ Y Y DPS+Y Y Y GY PQ PQQ
Sbjct: 318 A-YYGYGQGYDAYAYGGT--HDPSLYAYNAYAGY-----PQYPQQ 354
>gi|356550321|ref|XP_003543536.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 419
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/358 (58%), Positives = 253/358 (70%), Gaps = 32/358 (8%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
QQ E+RTLWIGDLQYW+DE YL+ CF HTGEV+++K+IRNK TGQ EGYGF+EF+S
Sbjct: 5 QQASTIEEVRTLWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVS 64
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQ 191
A AERVLQT+NGT MP +Q FRLNWASFG GE+R D P+H+IFVGDLA DVTDY+LQ
Sbjct: 65 HAAAERVLQTYNGTQMPATDQTFRLNWASFGIGERRPDAAPEHSIFVGDLAPDVTDYLLQ 124
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
ETFRA YPS +GAKVV D T R+KGYGFV+F DE+E+ RAMTEMNGV+CSTRPMRI A
Sbjct: 125 ETFRAHYPSVRGAKVVTDPNTARSKGYGFVKFSDENERNRAMTEMNGVYCSTRPMRISAA 184
Query: 252 TNKKTVSA----------------SYQN--SQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
T KKT A +Y + QV D D NNTT+FVGNLD V++E L+
Sbjct: 185 TPKKTTGAYAAPAAPVPKPVYPVPAYTSPVVQVQPPDYDVNNTTIFVGNLDLNVSEEELK 244
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
+ Q+G++V VKI GK GFVQF R+ AEEA++ + G +G Q +R+SWGR+ + +Q
Sbjct: 245 QNSLQFGEIVSVKIQPGKGFGFVQFGTRASAEEAIQKMQGKMIGQQVVRISWGRTLTARQ 304
Query: 354 AQP-------DPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNYQQPQQ 403
P DPNQW+A YYGY QGYE Y Y A DPS+Y YG YPGY Y PQQ
Sbjct: 305 DLPGGWGPQMDPNQWSA-YYGYGQGYEAYAYGPA--HDPSLYAYGAYPGYAQY--PQQ 357
>gi|302784144|ref|XP_002973844.1| hypothetical protein SELMODRAFT_100454 [Selaginella moellendorffii]
gi|302803590|ref|XP_002983548.1| hypothetical protein SELMODRAFT_118305 [Selaginella moellendorffii]
gi|300148791|gb|EFJ15449.1| hypothetical protein SELMODRAFT_118305 [Selaginella moellendorffii]
gi|300158176|gb|EFJ24799.1| hypothetical protein SELMODRAFT_100454 [Selaginella moellendorffii]
Length = 350
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/350 (62%), Positives = 265/350 (75%), Gaps = 19/350 (5%)
Query: 70 VPPQQQGQP-------GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQI 122
+PP +QGQ GE++TLW+GDLQYWMDE YL +CFAHT EV KVIRNKQTG
Sbjct: 2 LPPLKQGQAHSPGHANGELKTLWVGDLQYWMDEGYLYSCFAHTSEVQVAKVIRNKQTGYS 61
Query: 123 EGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDL 181
EGYGF+EF + + AE+VLQ+FNGT MP+ + FRLNWA FG GE+R D PD +IFVGDL
Sbjct: 62 EGYGFVEFTNHSTAEKVLQSFNGTQMPSTDIAFRLNWACFGIGERRPDQGPDFSIFVGDL 121
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
A DVTDYMLQETF++RY S KGAKVV+D T R+KGYGFVRFGDE+E++RAMTEM GV+C
Sbjct: 122 APDVTDYMLQETFQSRYSSVKGAKVVMDTTTARSKGYGFVRFGDEAEKMRAMTEMAGVYC 181
Query: 242 STRPMRIGPATNKKTVSA----SYQNSQV-AQSDDDPNNTTVFVGNLDSIVTDEHLRELF 296
STRPMRI AT KK+++ +QN V +D+DP+NTTVFVG LD V DE L+++F
Sbjct: 182 STRPMRISTATPKKSLATIPPKGFQNFGVPPLTDNDPSNTTVFVGGLDHSVKDEDLKQVF 241
Query: 297 SQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK-QAQ 355
SQ+G + +VKIPAGK CGFVQF R+ AEEAL+ L+G+ +G Q IRLSWGRSP+NK Q Q
Sbjct: 242 SQFGDIQYVKIPAGKNCGFVQFYTRASAEEALQKLHGSTIGQQTIRLSWGRSPANKQQVQ 301
Query: 356 PDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY-YGGYP-GYGNYQQPQQ 403
P+ NQWN YYGY QGYE YG+ A PQDP Y YG +P YG Y PQQ
Sbjct: 302 PEFNQWNGPYYGYGQGYECYGF-APPPQDPGAYAYGNFPQAYGTY--PQQ 348
>gi|388494114|gb|AFK35123.1| unknown [Medicago truncatula]
Length = 425
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 229/425 (53%), Positives = 279/425 (65%), Gaps = 29/425 (6%)
Query: 2 MQPAPGAVPPPPPPMAAHQYQYQQ----QAPPQQQPPPQ-PSPYMMM----MPPQPQAQP 52
MQ G+ P ++ Q QQ A PQQ P Q P+ M+M MPPQ A P
Sbjct: 1 MQQTNGSDSSSPSETTTNKQQRQQPPAPVAVPQQWIPMQYPTAAMVMPHHMMPPQHYAPP 60
Query: 53 PAMWATQAAAPQAAGVAVPPQQQ-------GQPGEIRTLWIGDLQYWMDETYLNTCFAHT 105
P + + VPP Q G GE +TLWIGDL WMDE+YL+ CFA T
Sbjct: 61 PYVPYHHHHHQFQQPLHVPPHQHQNHQNQHGSNGENKTLWIGDLHSWMDESYLHRCFAST 120
Query: 106 GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAG 165
GE+ +VKVIRNK +G EGYGF EF S A AE+VLQ + G MPN +Q FRLNWA+F G
Sbjct: 121 GEITSVKVIRNKHSGISEGYGFAEFFSHATAEKVLQNYAGILMPNADQAFRLNWATFSTG 180
Query: 166 EK-RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFG 224
+K D+ D +IFVGDLAADVTD +L ETF + YPS K AKVV D TGR+KGYGFVRFG
Sbjct: 181 DKGSDNVTDLSIFVGDLAADVTDSVLHETFSSSYPSVKAAKVVYDANTGRSKGYGFVRFG 240
Query: 225 DESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ-----NSQVAQSDDDPNNTTVF 279
DESE+ +AMT+MNGV+CS+RPMRIG AT +K S+ +Q N +QS+ D NTT+F
Sbjct: 241 DESERSQAMTQMNGVYCSSRPMRIGAATPRK--SSGHQPGGQTNGTSSQSEADSTNTTIF 298
Query: 280 VGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQ 339
VG LDS VTDE L++ FSQYG++ VKIP GK CGFVQFA+R+ AEEAL+ LNGT +G Q
Sbjct: 299 VGGLDSNVTDEDLKQTFSQYGEIASVKIPVGKGCGFVQFANRNNAEEALQKLNGTMIGKQ 358
Query: 340 NIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAP-QDPSMY---YGGYPGY 395
+RLSWGR+P+ KQ + D W AG Y + Y+ YGYA +P DPSMY YGGYP Y
Sbjct: 359 TVRLSWGRNPAYKQFRLDVGSW-AGPYFPSPIYDGYGYAMPSPHHDPSMYPLAYGGYPIY 417
Query: 396 GNYQQ 400
G + Q
Sbjct: 418 GGHSQ 422
>gi|356510359|ref|XP_003523906.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 409
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/370 (58%), Positives = 256/370 (69%), Gaps = 20/370 (5%)
Query: 43 MMPPQPQAQPP---AMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLN 99
MMPPQ A P A Q PQA G E +T+W+GDL +WMDE YL+
Sbjct: 45 MMPPQHYAPPQPYMAYHQYQQQVPQA-------HHLGSSAENKTVWVGDLHHWMDENYLH 97
Query: 100 TCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNW 159
CFA TGE+ ++KVIRNKQTG EGYGF+EF S A++VLQ + G MPN EQ FRLNW
Sbjct: 98 RCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTADKVLQNYAGILMPNTEQPFRLNW 157
Query: 160 ASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGY 218
A+F G+KR D+ PD +IFVGDLAADVTD ML ETF RYPS K AKVV D TGR+KGY
Sbjct: 158 ATFSTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFTNRYPSVKAAKVVFDANTGRSKGY 217
Query: 219 GFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS---ASYQNSQVAQSDDDPNN 275
GFVRFGD++E+ +AMTEMNGV+CS+RPMRIG AT +KT S N +QS+ D N
Sbjct: 218 GFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKTSGYQQGSQSNGTSSQSEADSTN 277
Query: 276 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQ 335
TT+FVG LD VT E L++ FSQYG++V VKIP GK CGFVQFA+R+ AEEAL+ LNGT
Sbjct: 278 TTIFVGGLDPNVTAEDLKQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTT 337
Query: 336 LGGQNIRLSWGRSPSNKQAQPD-PNQWNAGYYGYAQGYENYGYAAAAPQDPSM----YYG 390
+G Q +RLSWGRSP+NKQ + D N W+ YYG Y+ YGYA P DPS+ YG
Sbjct: 338 IGKQMVRLSWGRSPANKQFRADFGNAWSGAYYG-GPVYDGYGYALPPPYDPSIYAAAAYG 396
Query: 391 GYPGYGNYQQ 400
YP YG YQQ
Sbjct: 397 AYPIYGGYQQ 406
>gi|357465449|ref|XP_003603009.1| RNA-binding protein [Medicago truncatula]
gi|355492057|gb|AES73260.1| RNA-binding protein [Medicago truncatula]
Length = 420
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/401 (53%), Positives = 262/401 (65%), Gaps = 32/401 (7%)
Query: 29 PQQQPPPQPSPYMMMMPP----QPQAQPPA--------MWATQAAAPQAAGVA------- 69
PQQ+ PP PSP+ + PP P PPA + P +A
Sbjct: 20 PQQKTPPPPSPHSLTFPPPQQWVPMQYPPAAMVMPHHMLPPQHYPPPPHHYMAYHHYLHH 79
Query: 70 VPPQQQGQPG-EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
VP G + +TLW+GDL +WMDE YL+ CFA TGE+ ++KVIRNKQT Q EGYGF+
Sbjct: 80 VPHVHHGSSAADNKTLWVGDLHHWMDENYLHRCFASTGEIFSIKVIRNKQTCQTEGYGFV 139
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVT 186
EF S AE+VLQT+ G MPN EQ FRLNWA+F G+ + D+ PD +IFVGDLAADVT
Sbjct: 140 EFTSHGTAEKVLQTYAGMLMPNTEQPFRLNWATFSTGDHKRSDNVPDLSIFVGDLAADVT 199
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
D ML ETF +YPS K AKVV D TGR+KGYGFVRFGD+ E+ +A+ EMNGVFCS+R M
Sbjct: 200 DTMLLETFSDKYPSVKAAKVVFDANTGRSKGYGFVRFGDDGERSKALNEMNGVFCSSRAM 259
Query: 247 RIGPATNKKTVSASYQ-----NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQ 301
RIG AT +K S+ YQ N +QSD D NTT+FVG LD T E LR+ FSQYG+
Sbjct: 260 RIGAATPRK--SSGYQQGGQSNGTPSQSDTDSTNTTIFVGGLDPSATAEDLRQPFSQYGE 317
Query: 302 LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ- 360
+V VKIP GK CGFVQFA+R+ AEEAL+ LNGT +G Q +RLSWGR+P+NKQ + +
Sbjct: 318 IVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTVGKQTVRLSWGRNPANKQFRSEFGSP 377
Query: 361 WNA-GYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQ 400
WN YYG Y+ YGYA P D SMY YP YG +QQ
Sbjct: 378 WNGPAYYG-GPAYDGYGYAMPHPYDQSMYAAAYPMYGGHQQ 417
>gi|414589689|tpg|DAA40260.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 424
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/356 (60%), Positives = 256/356 (71%), Gaps = 15/356 (4%)
Query: 59 QAAAPQAAGV--AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRN 116
Q AAP A V + P Q GQ E +T+W+GDL +WMDE YL+ CF +TGEVVA+KVIRN
Sbjct: 68 QLAAPVPAVVLGSPAPHQAGQE-ENKTIWVGDLHFWMDENYLHNCFGYTGEVVAIKVIRN 126
Query: 117 KQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHT 175
KQTGQ EGYGF+EF S A AERVL+ F+G MPN +Q FRLNWASF G++R D DH+
Sbjct: 127 KQTGQSEGYGFVEFYSHAAAERVLEGFSGHIMPNTDQPFRLNWASFSMGDRRSDVASDHS 186
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
IFVGDLA+DV D L E F +RY S KGAKVVID TGR+KGYGFVRFGD+SE+ AMTE
Sbjct: 187 IFVGDLASDVNDATLLEVFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKTHAMTE 246
Query: 236 MNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSD-DDPNNTTVFVGNLDSIVTDEHLRE 294
MNGV+CS+RPMRIGPAT +K+ S N A+ D D NTTVFVG LD V++E LR+
Sbjct: 247 MNGVYCSSRPMRIGPATPRKSSGTSGSNGSSARPDGGDLTNTTVFVGGLDPDVSEEDLRQ 306
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 354
FSQYG++ VKIP GK+CGFVQFA R AE+AL+ LNG+ +G Q +RLSWGR+P+NKQ
Sbjct: 307 AFSQYGEISSVKIPVGKQCGFVQFAQRKNAEDALQGLNGSTIGKQAVRLSWGRNPANKQF 366
Query: 355 QPDPN--QW-NAGYYGYAQGYEN--YGYAAAAPQ-DPSMY----YGGYPGYGNYQQ 400
+ D QW N G Y A + N YGY AAAP DP MY YG YP YGN QQ
Sbjct: 367 RGDNGNMQWKNGGVYYAAPPFYNGGYGYPAAAPFPDPGMYAAPAYGAYPFYGNQQQ 422
>gi|356500047|ref|XP_003518846.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/299 (64%), Positives = 225/299 (75%), Gaps = 19/299 (6%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
EIRT+W+GDL +WMDE YL+ CFAHTGEVV+ KVIRNKQTGQ EGYGF+EF SR AE+V
Sbjct: 98 EIRTVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRGTAEKV 157
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQETFRAR 197
LQ +NGT MPN +Q FRLNWA+F AGE+R D T D +IFVGDLA DVTD MLQ+TF R
Sbjct: 158 LQNYNGTMMPNTDQAFRLNWATFSAGERRSSDATSDLSIFVGDLAIDVTDAMLQDTFAGR 217
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
Y S KGAKVVID TGR+KGYGFVRFGDE+E+ RAMTEMNGV+CS+RPMRIG AT KKT
Sbjct: 218 YSSIKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRPMRIGVATPKKTY 277
Query: 258 -----------------SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 300
SA+ +Q + S+ D NNTT+FVG LDS +DE LR+ F Q+G
Sbjct: 278 GFQQQYSSQAVVLAGGHSANGAVAQGSHSEGDINNTTIFVGGLDSDTSDEDLRQPFLQFG 337
Query: 301 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPN 359
++V VKIP GK CGFVQFADR AEEA++ LNGT +G Q +RLSWGRSP NK + D N
Sbjct: 338 EVVSVKIPVGKGCGFVQFADRKNAEEAIQGLNGTVIGKQTVRLSWGRSPGNKHWRSDSN 396
>gi|326528543|dbj|BAJ93453.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 416
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/331 (59%), Positives = 236/331 (71%), Gaps = 31/331 (9%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYW DE YL CFAHTGEV +VK+IRNK +G EGYGFIEFIS AE+V
Sbjct: 15 EVRTLWIGDLQYWADENYLYGCFAHTGEVQSVKLIRNKLSGLPEGYGFIEFISHEAAEKV 74
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQ +NG MP E FRLNWASF +GEKR D PDH+IFVGDLA DVTDY+LQETFR Y
Sbjct: 75 LQAYNGAQMPGTELTFRLNWASFSSGEKRPDAGPDHSIFVGDLAPDVTDYLLQETFRVNY 134
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S +GAKVV D TGR+KGYGFV+F DE+E+ RAM+EMNGV+CSTRPMRI A KK+
Sbjct: 135 SSVRGAKVVTDPNTGRSKGYGFVKFADENEKTRAMSEMNGVYCSTRPMRISAAIPKKSSG 194
Query: 259 ASYQ----------------NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 302
+ Q +Q D D NTT+F+GNLD VT+E LR++ Q+G+L
Sbjct: 195 SQLQYGAAKAMYPATAYAIPQAQTVLPDSDLTNTTIFIGNLDPNVTEEELRQICVQFGEL 254
Query: 303 VHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP------ 356
++VKIP GK CGFVQ+A R+ AEEA++ L+GT +G Q +RLSWGRSP+NKQ Q
Sbjct: 255 IYVKIPVGKGCGFVQYASRASAEEAVQRLHGTVIGQQVVRLSWGRSPANKQDQSAAWGQQ 314
Query: 357 -DPNQWNAGYYGYAQGYENYGYAAAAPQDPS 386
DPNQW+A YY Y GY+ YGY PQDPS
Sbjct: 315 ADPNQWSA-YYSY--GYDPYGY----PQDPS 338
>gi|356519168|ref|XP_003528246.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 410
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/402 (55%), Positives = 265/402 (65%), Gaps = 32/402 (7%)
Query: 26 QAPPQQQPPPQ------PSPYMMM----MPPQPQAQPP-----AMWATQAAAPQAAGVAV 70
QA Q+ PPPQ P+ M+M MPPQ A PP A Q P A+
Sbjct: 11 QATEQRTPPPQWMPMQYPAAAMVMQHHMMPPQHYAPPPPQPYMAYHHYQQQLPH----AL 66
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
QG E +T+W+GDL +WMDE YL+ CFA GE+ ++KVIRNKQTG EGYGF+EF
Sbjct: 67 HAHHQGSSAENKTVWVGDLHHWMDENYLHRCFASNGEISSIKVIRNKQTGLSEGYGFVEF 126
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYM 189
S AE+VLQ + G MPN EQ FRLNWA+FG G+KR D+ PD +IFVGDLAADVTD M
Sbjct: 127 YSHGTAEKVLQNYAGILMPNTEQPFRLNWATFGTGDKRSDNVPDLSIFVGDLAADVTDSM 186
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
L ETF RYPS K AKVV D TGR+KGYGFVRFGD+ E+ +AMTEMNGV+CS+RPMRIG
Sbjct: 187 LHETFSNRYPSVKAAKVVFDANTGRSKGYGFVRFGDDDERSQAMTEMNGVYCSSRPMRIG 246
Query: 250 PATNKKTVS---ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 306
AT +KT S N +QS+ D NTT+FVG LDS VT E L++ FSQYG++V VK
Sbjct: 247 AATPRKTSGYQQGSQSNGISSQSEADSTNTTIFVGGLDSNVTAEDLKQPFSQYGEIVSVK 306
Query: 307 IPAGKRCGFVQFADRS----CAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD-PNQW 361
IP GK CGF RS AEEAL+ LNGT +G Q +RLSWGR+P+NKQ + D N W
Sbjct: 307 IPVGKGCGFTICNSRSPGPKNAEEALQKLNGTTIGKQMVRLSWGRNPANKQFRADFGNAW 366
Query: 362 NAGYYGYAQGYENYGYAAAAPQDPSMY---YGGYPGYGNYQQ 400
+ YYG Y+ YGYA DPS+Y YG YP YG +QQ
Sbjct: 367 SGAYYG-GPVYDGYGYALPPSHDPSIYAAAYGAYPIYGGHQQ 407
>gi|82621158|gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum]
Length = 372
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/303 (61%), Positives = 234/303 (77%), Gaps = 18/303 (5%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+T+WIGDLQ WMDE YL++CF+H GEV++VK+IRNKQTGQ E YGF+EF + A AE+VLQ
Sbjct: 33 KTIWIGDLQQWMDENYLHSCFSHAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQ 92
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPS 200
++NGT MPN EQ FRLNWA+F AGEKR +T D +IFVGDLA+DVTD ML++TF +R+PS
Sbjct: 93 SYNGTMMPNAEQPFRLNWAAFSAGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRFPS 152
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK----- 255
KGAKVV+D TG +KGYGFVRFGDESE+ RAMTEMNG++CS+RPMR+G AT KK
Sbjct: 153 VKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGIYCSSRPMRVGVATPKKPSAQQ 212
Query: 256 -------TVSASYQNSQVA----QSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 304
+S Y ++ A QSD D +NTT+FVG LDS VTDE LR+ F+Q+G++V
Sbjct: 213 QFSSQAVILSGGYASNGSATHGSQSDGDSSNTTIFVGGLDSDVTDEELRQSFTQFGEVVS 272
Query: 305 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAG 364
VKIPAGK CGFVQF+DRS A+EA++ L+G +G Q +RLSWGRSP+NKQ + D G
Sbjct: 273 VKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRTDSGN-GGG 331
Query: 365 YYG 367
YYG
Sbjct: 332 YYG 334
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 270 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK------RCGFVQFADRSC 323
+ +N T+++G+L + + +L FS G+++ VKI K R GFV+F +
Sbjct: 27 NSSEDNKTIWIGDLQQWMDENYLHSCFSHAGEVISVKIIRNKQTGQSERYGFVEFNTHAA 86
Query: 324 AEEALRMLNGTQL--GGQNIRLSW 345
AE+ L+ NGT + Q RL+W
Sbjct: 87 AEKVLQSYNGTMMPNAEQPFRLNW 110
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 14/130 (10%)
Query: 34 PPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAA----GVAVPPQQQGQPGEIRTLWIGDL 89
+P + P +P AQ +++QA G A Q T+++G L
Sbjct: 194 SSRPMRVGVATPKKPSAQQQ--FSSQAVILSGGYASNGSATHGSQSDGDSSNTTIFVGGL 251
Query: 90 QYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMP 149
+ + L F GEVV+VK+ K G GF++F R+ A+ +Q +G +
Sbjct: 252 DSDVTDEELRQSFTQFGEVVSVKIPAGK------GCGFVQFSDRSSAQEAIQKLSGAII- 304
Query: 150 NGEQNFRLNW 159
G+Q RL+W
Sbjct: 305 -GKQAVRLSW 313
>gi|242042043|ref|XP_002468416.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
gi|241922270|gb|EER95414.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
Length = 415
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/360 (56%), Positives = 242/360 (67%), Gaps = 32/360 (8%)
Query: 68 VAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGF 127
+A P Q E+RTLWIGDLQYW DE YL +CFAHTGEV +VK+IRNK T EGYGF
Sbjct: 1 MAAPYHQPTSLEEVRTLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGF 60
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVT 186
IEF+S AE++LQT+NGT MP E FRLNWASF +GE+R D DH+IFVGDLA DVT
Sbjct: 61 IEFVSHEAAEKILQTYNGTQMPGTEHTFRLNWASFSSGERRPDPGSDHSIFVGDLAPDVT 120
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
DY+LQETFR YPS +GAKVV D TGR+KGYGFV+F DE+E+ RAMTEMNGV+CSTRPM
Sbjct: 121 DYLLQETFRVNYPSVRGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRPM 180
Query: 247 RIGPATNKKTVSASYQNS----------------QVAQSDDDPNNTTVFVGNLDSIVTDE 290
RI A KK+ + Q S Q D DP NTT+F+GNLD VT++
Sbjct: 181 RISAAIPKKSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNTTIFIGNLDPNVTED 240
Query: 291 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
LR++ Q+G+L++VKIP GK CGFVQ+A R+ AEEA++ L+GT +G Q +RLSWGRSP+
Sbjct: 241 ELRQICVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGRSPA 300
Query: 351 NKQ-------AQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQ 403
+KQ Q DPNQW Y A QDPS YG Y GY Y PQQ
Sbjct: 301 SKQDPSAVWSQQADPNQWA------NTYYGYGYDAYGYAQDPSYAYGAYAGYSQY--PQQ 352
>gi|108706453|gb|ABF94248.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215694482|dbj|BAG89475.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 416
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/359 (57%), Positives = 242/359 (67%), Gaps = 32/359 (8%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
A P Q E+RTLWIGDLQYW DE YL CFAHTGE+ +VK+IRNK T EGYGFI
Sbjct: 3 AAPYHQPTSLEEVRTLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFI 62
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTD 187
EFIS AE+VLQT+NGT MP E FRLNWASF +GE+R D PDH+IFVGDLA DVTD
Sbjct: 63 EFISHEVAEKVLQTYNGTQMPGTEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTD 122
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
Y+LQETFR YPS KGAKVV D TGR+KGYGFV+F DE+E+ RAMTEMNG++CSTRPMR
Sbjct: 123 YLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMR 182
Query: 248 IGPATNKKTV--------------SASYQNSQV--AQSDDDPNNTTVFVGNLDSIVTDEH 291
I A KKT +A Y QV D DP NTT+F+GNLD VT++
Sbjct: 183 ISAAIPKKTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPTNTTIFIGNLDQNVTEDE 242
Query: 292 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 351
LR++ Q+G+L++VKIPA K CGFVQ+A R+ AEEA++ L+GT +G Q +RLSWGRSP++
Sbjct: 243 LRQICVQFGELIYVKIPANKACGFVQYASRASAEEAVQRLHGTTIGQQVVRLSWGRSPAS 302
Query: 352 KQAQP-------DPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQ 403
KQ Q DPNQW + Y A QDPS Y Y GY Y PQQ
Sbjct: 303 KQDQSAVWSQQADPNQWA------SAYYGYGYDAYGYAQDPSYAYNSYAGYTQY--PQQ 353
>gi|449523756|ref|XP_004168889.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 437
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/311 (62%), Positives = 233/311 (74%), Gaps = 22/311 (7%)
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
P++QG E++TLWIGDLQ WMDETYLN CFAHTGEV +VKVI NKQTGQ EGYGF+EF
Sbjct: 90 PRRQGSTDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFF 149
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYML 190
S AE+VLQ +NGT MPN E FRLNWA+F A ++R DT D +IFVGDLAADVTD +L
Sbjct: 150 SHTTAEKVLQNYNGTIMPNTELPFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAIL 209
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
QETF +RY S KGAKVVID +GR+KGYGFVRFGDE+E+ RAMTEMNG++CS+RPMRIG
Sbjct: 210 QETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRPMRIGV 269
Query: 251 ATNKKTVSASYQNS------------------QVAQSDDDPNNTTVFVGNLDSIVTDEHL 292
AT KK ++ YQ Q +QSD + NNTT+FVG LDS V+DE L
Sbjct: 270 ATPKK--ASGYQQGYASQALVLAGGHPNGMAVQGSQSDSESNNTTIFVGGLDSDVSDEDL 327
Query: 293 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
++ FS++G +V VKIP GK CGFVQFA+R AE+A++ LNGT +G Q +RLSWGRS NK
Sbjct: 328 KQAFSKFGDVVSVKIPIGKGCGFVQFANRKNAEDAIQGLNGTVIGKQTVRLSWGRSTGNK 387
Query: 353 QAQPDP-NQWN 362
Q + D NQWN
Sbjct: 388 QWRGDSNNQWN 398
>gi|115451047|ref|NP_001049124.1| Os03g0174100 [Oryza sativa Japonica Group]
gi|113547595|dbj|BAF11038.1| Os03g0174100, partial [Oryza sativa Japonica Group]
Length = 438
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/359 (57%), Positives = 242/359 (67%), Gaps = 32/359 (8%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
A P Q E+RTLWIGDLQYW DE YL CFAHTGE+ +VK+IRNK T EGYGFI
Sbjct: 25 AAPYHQPTSLEEVRTLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFI 84
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTD 187
EFIS AE+VLQT+NGT MP E FRLNWASF +GE+R D PDH+IFVGDLA DVTD
Sbjct: 85 EFISHEVAEKVLQTYNGTQMPGTEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTD 144
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
Y+LQETFR YPS KGAKVV D TGR+KGYGFV+F DE+E+ RAMTEMNG++CSTRPMR
Sbjct: 145 YLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMR 204
Query: 248 IGPATNKKTV--------------SASYQNSQV--AQSDDDPNNTTVFVGNLDSIVTDEH 291
I A KKT +A Y QV D DP NTT+F+GNLD VT++
Sbjct: 205 ISAAIPKKTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPTNTTIFIGNLDQNVTEDE 264
Query: 292 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 351
LR++ Q+G+L++VKIPA K CGFVQ+A R+ AEEA++ L+GT +G Q +RLSWGRSP++
Sbjct: 265 LRQICVQFGELIYVKIPANKACGFVQYASRASAEEAVQRLHGTTIGQQVVRLSWGRSPAS 324
Query: 352 KQAQP-------DPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQ 403
KQ Q DPNQW + Y A QDPS Y Y GY Y PQQ
Sbjct: 325 KQDQSAVWSQQADPNQWA------SAYYGYGYDAYGYAQDPSYAYNSYAGYTQY--PQQ 375
>gi|224123466|ref|XP_002330321.1| predicted protein [Populus trichocarpa]
gi|222871356|gb|EEF08487.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/306 (63%), Positives = 232/306 (75%), Gaps = 20/306 (6%)
Query: 76 GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAG 135
G E +T+W+GDL +WMDE YL+ CF+HTGEV +VK+IRNKQTGQ+EGYGF+EF SRA
Sbjct: 59 GSNEEAKTIWVGDLLHWMDEAYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYSRAA 118
Query: 136 AERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDD-TPDHTIFVGDLAADVTDYMLQETF 194
AE+VLQ+++G+ MPN EQ FRLNWASF AGE+R D D +IFVGDLAADVTD MLQETF
Sbjct: 119 AEKVLQSYSGSMMPNTEQPFRLNWASF-AGERRADPGSDLSIFVGDLAADVTDSMLQETF 177
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+YPS KGAKVVID TGR+KGYGFVRFGDE+E+ RAM EMNG FCS+RPMRIG AT K
Sbjct: 178 AGKYPSVKGAKVVIDSNTGRSKGYGFVRFGDENEKTRAMMEMNGAFCSSRPMRIGVATPK 237
Query: 255 KTVSASYQNS-----------------QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 297
K + Q S Q +QSD D NNTT+FVG +DS VTDE LR+ FS
Sbjct: 238 KPSAYQQQYSSQALVLAGGHASNGAMAQGSQSDGDSNNTTIFVGGIDSDVTDEDLRQPFS 297
Query: 298 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD 357
Q+G++V VKIP GK C FVQFA+R AE+AL+ LNGT +G Q +RLSWGR+P+NKQ + D
Sbjct: 298 QFGEVVSVKIPVGKGCAFVQFANRKNAEDALQSLNGTTIGKQTVRLSWGRTPANKQWRGD 357
Query: 358 P-NQWN 362
NQW+
Sbjct: 358 HGNQWH 363
>gi|218192181|gb|EEC74608.1| hypothetical protein OsI_10216 [Oryza sativa Indica Group]
Length = 416
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/359 (57%), Positives = 242/359 (67%), Gaps = 32/359 (8%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
A P Q E+RTLWIGDLQYW DE YL CFAHTGE+ +VK+IRNK T EGYGFI
Sbjct: 3 AAPYHQPTSLEEVRTLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFI 62
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTD 187
EFIS AE+VLQT+NGT MP E FRLNWASF +GE+R D PDH+IFVGDLA DVTD
Sbjct: 63 EFISHEVAEKVLQTYNGTQMPGTEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTD 122
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
Y+LQETFR YPS KGAKVV D TGR+KGYGFV+F DE+E+ RAMTEMNG++CSTRPMR
Sbjct: 123 YLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMR 182
Query: 248 IGPATNKKTV--------------SASYQNSQV--AQSDDDPNNTTVFVGNLDSIVTDEH 291
I A KKT +A Y QV D DP NTT+F+GNLD VT++
Sbjct: 183 ISAAIPKKTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPTNTTIFIGNLDQNVTEDE 242
Query: 292 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 351
LR++ Q+G+L++VKIPA K CGFVQ+A R+ AEEA++ L+GT +G Q +RLSWGRSP++
Sbjct: 243 LRQICVQFGELIYVKIPANKACGFVQYASRASAEEAVQRLHGTTIGQQVVRLSWGRSPAS 302
Query: 352 KQAQP-------DPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQ 403
KQ Q DPNQW + Y A QDPS Y Y GY Y PQQ
Sbjct: 303 KQDQSAVWSQQADPNQWA------SAYYGYGYDAYGYAQDPSYAYNSYAGYTQY--PQQ 353
>gi|357113824|ref|XP_003558701.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 418
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/360 (55%), Positives = 238/360 (66%), Gaps = 32/360 (8%)
Query: 68 VAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGF 127
+A P Q E+RTLWIGDLQ+W DE YL CFAHTGEV +VK+IRNK T EGYGF
Sbjct: 3 MAAPYHQPTTLEEVRTLWIGDLQFWADEAYLYNCFAHTGEVQSVKIIRNKVTNLPEGYGF 62
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVT 186
IEFIS AE+VLQT+NG MP E FRLNWASF +GE+R D PDH+IFVGDLA DVT
Sbjct: 63 IEFISHEAAEKVLQTYNGAQMPGSEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVT 122
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
DY+LQETFR Y S +GAKVV D TGR+KGYGFV+F DE+E+ RAM+EMNGV+CSTRPM
Sbjct: 123 DYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKTRAMSEMNGVYCSTRPM 182
Query: 247 RIGPATNKKTVSASYQ----------------NSQVAQSDDDPNNTTVFVGNLDSIVTDE 290
RI A KK+ + Q +Q A D D NTT+F+GNLD T+E
Sbjct: 183 RISAAIPKKSSGSQLQYGTAKAMYPAAAYAVPQAQPALPDSDLTNTTIFIGNLDPNATEE 242
Query: 291 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
LR+L Q+G+L++VKIP GK CGFVQ+A R+ AEEA++ L+GT +G Q +RLSWGRSP+
Sbjct: 243 ELRQLCVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMIGQQVVRLSWGRSPA 302
Query: 351 NKQAQP-------DPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQ 403
NKQ Q DPNQW Y QDPS YG Y GY Y PQQ
Sbjct: 303 NKQDQSAAWTQQADPNQWT------GAYYGYGYDPYGYAQDPSYAYGAYAGYSQY--PQQ 354
>gi|297741313|emb|CBI32444.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/309 (60%), Positives = 231/309 (74%), Gaps = 23/309 (7%)
Query: 75 QGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRA 134
G EI+TLW+GDL WMD+ YL TCF HTGEV ++K+IRNKQTGQ EGYGF+EF SRA
Sbjct: 2 HGSTDEIKTLWVGDLHQWMDDNYLRTCFGHTGEVSSIKIIRNKQTGQSEGYGFVEFFSRA 61
Query: 135 GAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQET 193
AE++L ++NGT MPN EQ FRLNWA+F G++R D D +IFVGDLA+DVTD +LQET
Sbjct: 62 TAEKILHSYNGTLMPNTEQPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQET 121
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F RYPS KGAKVV D TGR+KGYGFVRFGDE+E+ RAM EMNG++CS+RPMRIG AT
Sbjct: 122 FATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATP 181
Query: 254 KKTVSASYQN-------------------SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
KK ++ YQ +Q +Q++ D NTT+FVG LDS VTDE LR+
Sbjct: 182 KK--ASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQ 239
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 354
FSQ+G++V VKIP GK CGFVQFA+R+ AE+AL+ LNGT +G Q +RLSWGR+P++KQ
Sbjct: 240 SFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGRNPASKQW 299
Query: 355 QPDP-NQWN 362
+ D NQWN
Sbjct: 300 RNDSNNQWN 308
>gi|223948225|gb|ACN28196.1| unknown [Zea mays]
gi|414590425|tpg|DAA40996.1| TPA: hypothetical protein ZEAMMB73_114709 [Zea mays]
Length = 503
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/324 (62%), Positives = 237/324 (73%), Gaps = 15/324 (4%)
Query: 79 GEIRTLWIGDLQYWMDETYLN-TCFAHTGEVVA-VKVIRNKQTGQIEGYGFIEFISRAGA 136
GE+RTLWIGDLQYWMDE YL+ FA + +A VK+IRNKQTG EGYGFIEF S+A A
Sbjct: 143 GEVRTLWIGDLQYWMDENYLHYNAFAPVAQQIASVKIIRNKQTGHSEGYGFIEFYSQAAA 202
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFR 195
E L FNG MPN E F+LNWAS G+KR D+ DH IFVGDLA DVTD ML++ FR
Sbjct: 203 EHTLMNFNGQMMPNIEMAFKLNWASASTGDKRGDNGSDHAIFVGDLAPDVTDSMLEDVFR 262
Query: 196 ARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255
A YPS +GAKVV+DR+TGR KGYGFV FGD +EQ RAMTEMNG+ STR MRIG A +KK
Sbjct: 263 ANYPSVRGAKVVVDRITGRPKGYGFVHFGDLNEQARAMTEMNGMMLSTRKMRIGAAASKK 322
Query: 256 TVSA--------SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 307
A +YQ+SQ S++DPNNTTVFVG LDS V +E+LR++F+ YG++ +VKI
Sbjct: 323 NTDAQQTYATNGAYQSSQGNCSENDPNNTTVFVGGLDSNVDEEYLRQIFTPYGEISYVKI 382
Query: 308 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA-QPDPN-QWNA-G 364
P GK CGFVQF RSCAEEA++MLNG+Q+GGQ RLSWGRS N+QA Q D N Q+N
Sbjct: 383 PVGKHCGFVQFTSRSCAEEAIQMLNGSQIGGQKARLSWGRSTQNRQASQHDANSQYNGNN 442
Query: 365 YYGYAQ-GYENYGYAAAAPQDPSM 387
YY Y Q G E Y Y A QDPS+
Sbjct: 443 YYRYQQPGNEGYSYGAPNAQDPSI 466
>gi|212276053|ref|NP_001130512.1| uncharacterized protein LOC100191611 [Zea mays]
gi|194689348|gb|ACF78758.1| unknown [Zea mays]
gi|414590424|tpg|DAA40995.1| TPA: hypothetical protein ZEAMMB73_114709 [Zea mays]
Length = 472
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/324 (62%), Positives = 237/324 (73%), Gaps = 15/324 (4%)
Query: 79 GEIRTLWIGDLQYWMDETYLN-TCFAHTGEVVA-VKVIRNKQTGQIEGYGFIEFISRAGA 136
GE+RTLWIGDLQYWMDE YL+ FA + +A VK+IRNKQTG EGYGFIEF S+A A
Sbjct: 112 GEVRTLWIGDLQYWMDENYLHYNAFAPVAQQIASVKIIRNKQTGHSEGYGFIEFYSQAAA 171
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFR 195
E L FNG MPN E F+LNWAS G+KR D+ DH IFVGDLA DVTD ML++ FR
Sbjct: 172 EHTLMNFNGQMMPNIEMAFKLNWASASTGDKRGDNGSDHAIFVGDLAPDVTDSMLEDVFR 231
Query: 196 ARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255
A YPS +GAKVV+DR+TGR KGYGFV FGD +EQ RAMTEMNG+ STR MRIG A +KK
Sbjct: 232 ANYPSVRGAKVVVDRITGRPKGYGFVHFGDLNEQARAMTEMNGMMLSTRKMRIGAAASKK 291
Query: 256 TVSA--------SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 307
A +YQ+SQ S++DPNNTTVFVG LDS V +E+LR++F+ YG++ +VKI
Sbjct: 292 NTDAQQTYATNGAYQSSQGNCSENDPNNTTVFVGGLDSNVDEEYLRQIFTPYGEISYVKI 351
Query: 308 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA-QPDPN-QWNA-G 364
P GK CGFVQF RSCAEEA++MLNG+Q+GGQ RLSWGRS N+QA Q D N Q+N
Sbjct: 352 PVGKHCGFVQFTSRSCAEEAIQMLNGSQIGGQKARLSWGRSTQNRQASQHDANSQYNGNN 411
Query: 365 YYGYAQ-GYENYGYAAAAPQDPSM 387
YY Y Q G E Y Y A QDPS+
Sbjct: 412 YYRYQQPGNEGYSYGAPNAQDPSI 435
>gi|302142363|emb|CBI19566.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/324 (60%), Positives = 239/324 (73%), Gaps = 19/324 (5%)
Query: 93 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE 152
MDE YL++CFA TGE+ ++KVIRNKQTG EGYGF+EF S A AE+VLQ + G MPN +
Sbjct: 1 MDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQGYAGVLMPNTD 60
Query: 153 QNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRL 211
Q FRLNWA+F G+KR D PD +IFVGDLA+DV+D +L ETF +YPS K AKVV D
Sbjct: 61 QPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDAN 120
Query: 212 TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ--------- 262
TGR+KGYGFVRFGDE+E+ +AMTEMNGV+CS+RPMRIG AT +K S+ YQ
Sbjct: 121 TGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRK--SSGYQQQYSSHGGY 178
Query: 263 --NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFAD 320
N QSD D NTT+FVG LD V+DE LR+ FSQYG++V VKIP GK CGFVQFA+
Sbjct: 179 ASNGASVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFAN 238
Query: 321 RSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD-PNQWNAGYYGYAQGYENYGYAA 379
R+ AE+AL+ LNGT +G Q +RLSWGR+P+NKQ + D NQW+ YYG Q Y+ YGYA
Sbjct: 239 RNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYG-GQVYDGYGYAL 297
Query: 380 AAPQDPSMY---YGGYPGYGNYQQ 400
P DP+MY YG YP YGN+QQ
Sbjct: 298 PPPHDPTMYAAAYGAYPVYGNHQQ 321
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + + L F+ GE+V+VK+ K G GF++F +R AE LQ
Sbjct: 195 TIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGK------GCGFVQFANRNNAEDALQK 248
Query: 143 FNGTPMPNGEQNFRLNW 159
NGT + G+Q RL+W
Sbjct: 249 LNGTVI--GKQTVRLSW 263
>gi|356538950|ref|XP_003537963.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/342 (57%), Positives = 242/342 (70%), Gaps = 28/342 (8%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYW+DE+YL+ CFAH GEVV++K+IRNK TGQ EGYGF+EF+S A AE
Sbjct: 8 EVRTLWIGDLQYWVDESYLSQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAF 67
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
L+T+NG MP EQ FRLNWASFG D PDH+IFVGDLA DVTD++LQETFRA YP
Sbjct: 68 LRTYNGAQMPGTEQTFRLNWASFG-----DSGPDHSIFVGDLAPDVTDFLLQETFRAHYP 122
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S KGAKVV D TGR+KGYGFV+F DE+++ RAMTEMNGV+CSTRPMRI AT KK S
Sbjct: 123 SVKGAKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASF 182
Query: 260 SYQNS---------------QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 304
+Q + ++D NNTTV +GNLD VT+E L++ F Q+G +V
Sbjct: 183 QHQYAPPKAMYQFPAYSAPVSAVAPENDVNNTTVCIGNLDLNVTEEELKQTFMQFGDIVL 242
Query: 305 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAG 364
VKI AGK G+VQF R AE+A++ + G +G Q I++SWG S + +Q DP+QW+A
Sbjct: 243 VKIYAGKGYGYVQFGTRVSAEDAIQRMQGKVIGQQVIQISWGSSMTARQM--DPSQWSA- 299
Query: 365 YYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNYQQPQQPQ 405
YYGY QGYE Y Y A QDPS+Y YG Y GY Y PQQ +
Sbjct: 300 YYGYGQGYEAYAYGAT--QDPSIYTYGAYAGYAQY--PQQVE 337
>gi|50725189|dbj|BAD33940.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|51535291|dbj|BAD38554.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
Length = 316
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/314 (62%), Positives = 232/314 (73%), Gaps = 6/314 (1%)
Query: 93 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE 152
MDE YL++CF +TGEVVA+KVIRNKQTGQ EGYGF+EF S A AE+VL+ F G MPN +
Sbjct: 1 MDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFAGHIMPNTD 60
Query: 153 QNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRL 211
Q FR+NWASF G++R D DH+IFVGDLA+DV D L ETF RY S KGAKVVID
Sbjct: 61 QPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDAN 120
Query: 212 TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDD 271
TGR+KGYGFVRFGD++E+ AMTEMNGV+CSTRPMRIGPAT +KT S A+SD
Sbjct: 121 TGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGPATPRKTSGTSGPTGSAARSDG 180
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
D NTTVFVG LD V+++ LR+ FSQYG++ VKIP GK+CGFVQF R AE+AL+ L
Sbjct: 181 DLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGL 240
Query: 332 NGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAG-YYGYAQGYENYGYAAAAPQDPSMY- 388
NG+ +G Q +RLSWGR+P+NKQ + D +QWN G YY + Y YGY A P DP MY
Sbjct: 241 NGSTIGKQTVRLSWGRNPANKQLRSDNGSQWNNGMYYAASPFYSGYGYPAPFPADPGMYA 300
Query: 389 --YGGYPGYGNYQQ 400
YG YP YGN QQ
Sbjct: 301 AAYGAYPFYGNQQQ 314
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L F+ GE+ +VK+ KQ GF++F+ R AE LQ
Sbjct: 186 TVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQC------GFVQFVQRKNAEDALQG 239
Query: 143 FNGTPMPNGEQNFRLNWA 160
NG+ + G+Q RL+W
Sbjct: 240 LNGSTI--GKQTVRLSWG 255
>gi|356538948|ref|XP_003537962.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/349 (57%), Positives = 243/349 (69%), Gaps = 33/349 (9%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYW+DE+YL+ CFAH GEVV++K+IRNK TGQ EGYGF+EF+S A AE
Sbjct: 8 EVRTLWIGDLQYWVDESYLSQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAF 67
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
L+T+NG MP EQ FRLNWASFG D PDH+IFVGDLA DVTD++LQETFRA YP
Sbjct: 68 LRTYNGAQMPGTEQTFRLNWASFG-----DSGPDHSIFVGDLAPDVTDFLLQETFRAHYP 122
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S KGAKVV D TGR+KGYGFV+F DE+++ RAMTEMNGV+CSTRPMRI AT KK S
Sbjct: 123 SVKGAKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASF 182
Query: 260 SYQNS---------------QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 304
+Q + ++D NNTTV +GNLD VT+E L++ F Q+G +V
Sbjct: 183 QHQYAPPKAMYQFPAYSAPVSAVAPENDVNNTTVCIGNLDLNVTEEELKQTFMQFGDIVL 242
Query: 305 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ-------AQPD 357
VKI AGK G+VQF R AE+A++ + G +G Q I++SWG S + +Q Q D
Sbjct: 243 VKIYAGKGYGYVQFGTRVSAEDAIQRMQGKVIGQQVIQISWGSSMTARQDVPGGWGVQMD 302
Query: 358 PNQWNAGYYGYAQGYENYGYAAAAPQDPSMY-YGGYPGYGNYQQPQQPQ 405
P+QW+A YYGY QGYE Y Y A QDPS+Y YG Y GY Y PQQ +
Sbjct: 303 PSQWSA-YYGYGQGYEAYAYGAT--QDPSIYTYGAYAGYAQY--PQQVE 346
>gi|226506980|ref|NP_001152183.1| LOC100285821 [Zea mays]
gi|195653617|gb|ACG46276.1| RNA-binding post-transcriptional regulator csx1 [Zea mays]
Length = 415
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/360 (55%), Positives = 240/360 (66%), Gaps = 32/360 (8%)
Query: 68 VAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGF 127
+A P Q E+RTLWIGDLQYW DE YL +CFAHTGEV +VK+IRNK T EGYGF
Sbjct: 1 MAAPYHQPTSLEEVRTLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGF 60
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVT 186
IEF+S AE++LQT+NGT MP E FRLNWASF +GE+R D DH+IFVGDLA DVT
Sbjct: 61 IEFVSHEAAEKILQTYNGTQMPGTEHTFRLNWASFSSGERRPDPGSDHSIFVGDLAPDVT 120
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
DY+LQETFR Y S +GAKVV D TGR+KGYGFV+F DE+E+ RAMTEMNGV+CSTRPM
Sbjct: 121 DYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRPM 180
Query: 247 RIGPATNKKTVSASYQNS----------------QVAQSDDDPNNTTVFVGNLDSIVTDE 290
RI A KK+ + Q S Q D DP NTT+F+GNLD V ++
Sbjct: 181 RISAAIPKKSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNTTIFIGNLDPNVIED 240
Query: 291 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
LR++ Q+G+L++VKIP GK CGFVQ+A R+ AEEA++ L+GT +G Q +RLSWGRSP+
Sbjct: 241 ELRQICVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGRSPA 300
Query: 351 NKQ-------AQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQ 403
+KQ Q DPNQW Y A QDPS YG Y GY Y PQQ
Sbjct: 301 SKQDSSAVWSQQADPNQWA------NAYYGYGYDAYGYAQDPSYAYGAYAGYSQY--PQQ 352
>gi|238005936|gb|ACR34003.1| unknown [Zea mays]
gi|414865083|tpg|DAA43640.1| TPA: RNA-binding post-transcriptional regulator csx1 [Zea mays]
Length = 415
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/360 (55%), Positives = 240/360 (66%), Gaps = 32/360 (8%)
Query: 68 VAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGF 127
+A P Q E+RTLWIGDLQYW DE YL +CFAHTGEV +VK+IRNK T EGYGF
Sbjct: 1 MAAPYHQPTSLEEVRTLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGF 60
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVT 186
IEF+S AE++LQT+NGT MP E FRLNWASF +GE+R D DH+IFVGDLA DVT
Sbjct: 61 IEFVSHEAAEKILQTYNGTQMPGTEHTFRLNWASFSSGERRPDPGSDHSIFVGDLAPDVT 120
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
DY+LQETFR Y S +GAKVV D TGR+KGYGFV+F DE+E+ RAMTEMNGV+CSTRPM
Sbjct: 121 DYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRPM 180
Query: 247 RIGPATNKKTVSASYQNS----------------QVAQSDDDPNNTTVFVGNLDSIVTDE 290
RI A KK+ + Q S Q D DP NTT+F+GNLD V ++
Sbjct: 181 RISAAIPKKSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNTTIFIGNLDPNVIED 240
Query: 291 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
LR++ Q+G+L++VKIP GK CGFVQ+A R+ AEEA++ L+GT +G Q +RLSWGRSP+
Sbjct: 241 ELRQICVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGRSPA 300
Query: 351 NKQ-------AQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQ 403
+KQ Q DPNQW Y A QDPS YG Y GY Y PQQ
Sbjct: 301 SKQDSSAVWSQQADPNQWA------NTYYGYGYDAYGYAQDPSYAYGAYAGYSQY--PQQ 352
>gi|357475467|ref|XP_003608019.1| RNA Binding Protein [Medicago truncatula]
gi|355509074|gb|AES90216.1| RNA Binding Protein [Medicago truncatula]
Length = 454
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/304 (61%), Positives = 225/304 (74%), Gaps = 24/304 (7%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P EIRT+W+GDL +WMDET+L+ CFAHTGEV + KVIRNKQTGQ EGYGF+EF +RA AE
Sbjct: 112 PEEIRTIWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNKQTGQSEGYGFVEFYTRAMAE 171
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASF----GAGEKR--DDTPDHTIFVGDLAADVTDYMLQ 191
+VLQ FNGT MPN +Q FRLNWA+F G GE+R + T D ++FVGDLA DVTD MLQ
Sbjct: 172 KVLQNFNGTMMPNTDQAFRLNWATFSAAGGGGERRSSEATSDLSVFVGDLAIDVTDAMLQ 231
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
ETF +++ S KGAKVVID TGR+KGYGFVRFGDESE+ RAMTEMNGV+CS+RPMR+G A
Sbjct: 232 ETFASKFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRVGVA 291
Query: 252 TNKKTVSASYQNS------------------QVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
T KKT Q S Q +QS+ D NNTT+FVG LDS ++DE LR
Sbjct: 292 TPKKTYGNPQQYSSQAVVLAGGGGHSNGAMAQGSQSEGDSNNTTIFVGGLDSDISDEDLR 351
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
+ F Q+G ++ VKIP GK CGFVQ ADR AEEA++ LNGT +G Q +RLSWGRSP NK
Sbjct: 352 QPFLQFGDVISVKIPVGKGCGFVQLADRKNAEEAIQGLNGTVIGKQTVRLSWGRSPGNKH 411
Query: 354 AQPD 357
+ D
Sbjct: 412 GRND 415
>gi|297852632|ref|XP_002894197.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
gi|297340039|gb|EFH70456.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
Length = 450
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/324 (60%), Positives = 237/324 (73%), Gaps = 21/324 (6%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+++TLW+GDL +WMDETYL+TCF+HT EV +VKVIRNKQT Q EGYGF+EF+SR+ AE
Sbjct: 122 DVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEA 181
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQETFRAR 197
LQ+F+G MPN EQ FRLNWASF GEKR ++ PD +IFVGDLA DV+D +L ETF R
Sbjct: 182 LQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGR 241
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
YPS KGAKVVID TGR+KGYGFVRFGDE+E+ RAMTEMNG FCS+R MR+G AT K+
Sbjct: 242 YPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAA 301
Query: 258 SASYQNSQVA------------QSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 305
+ QN A SD + NN+T+FVG LD+ VT+E L + FSQ+G++V V
Sbjct: 302 AYGQQNGSQALTLAGGHGGNGSLSDGESNNSTIFVGGLDADVTEEDLMQPFSQFGEVVSV 361
Query: 306 KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAG 364
KIP GK CGFVQFA+R AEEA+ LNGT +G +RLSWGRSP NKQ + D NQWN G
Sbjct: 362 KIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSP-NKQWRSDTGNQWNGG 420
Query: 365 YYGYAQGYENYGYAAAAPQDPSMY 388
Y QGY N GY A QD +MY
Sbjct: 421 -YSRGQGYNN-GY---ANQDSNMY 439
>gi|225428741|ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 416
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/311 (60%), Positives = 231/311 (74%), Gaps = 25/311 (8%)
Query: 75 QGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEV--VAVKVIRNKQTGQIEGYGFIEFIS 132
G EI+TLW+GDL WMD+ YL TCF HTGEV ++K+IRNKQTGQ EGYGF+EF S
Sbjct: 74 HGSTDEIKTLWVGDLHQWMDDNYLRTCFGHTGEVKVSSIKIIRNKQTGQSEGYGFVEFFS 133
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQ 191
RA AE++L ++NGT MPN EQ FRLNWA+F G++R D D +IFVGDLA+DVTD +LQ
Sbjct: 134 RATAEKILHSYNGTLMPNTEQPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQ 193
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
ETF RYPS KGAKVV D TGR+KGYGFVRFGDE+E+ RAM EMNG++CS+RPMRIG A
Sbjct: 194 ETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVA 253
Query: 252 TNKKTVSASYQN-------------------SQVAQSDDDPNNTTVFVGNLDSIVTDEHL 292
T KK ++ YQ +Q +Q++ D NTT+FVG LDS VTDE L
Sbjct: 254 TPKK--ASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDL 311
Query: 293 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
R+ FSQ+G++V VKIP GK CGFVQFA+R+ AE+AL+ LNGT +G Q +RLSWGR+P++K
Sbjct: 312 RQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGRNPASK 371
Query: 353 QAQPDP-NQWN 362
Q + D NQWN
Sbjct: 372 QWRNDSNNQWN 382
>gi|194697962|gb|ACF83065.1| unknown [Zea mays]
gi|414885795|tpg|DAA61809.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 320
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/318 (63%), Positives = 239/318 (75%), Gaps = 10/318 (3%)
Query: 93 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE 152
MDE YL++CF +TGEVVA+KVIRNKQTGQ EGYGF+EF S A AE+VL+ F+G MPN +
Sbjct: 1 MDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFSGHIMPNTD 60
Query: 153 QNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRL 211
Q FRLNWASF G++R D+ DH+IFVGDLA+DV D L E F +RY S KGAKVVID
Sbjct: 61 QPFRLNWASFSMGDRRSDSASDHSIFVGDLASDVNDATLLEAFSSRYSSVKGAKVVIDAN 120
Query: 212 TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSD- 270
TGR+KGYGFVRFGD+SE+ +AMTEMNGV+CS+RPMRIGPAT +K+ S N A+SD
Sbjct: 121 TGRSKGYGFVRFGDDSEKTQAMTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSAARSDG 180
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRM 330
D NTTVFVG LD V++E LR+ FSQYG++ VKIP GK+CGFVQFA R AE+AL+
Sbjct: 181 GDLTNTTVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCGFVQFAQRKNAEDALQG 240
Query: 331 LNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAG--YYGYAQGYENYGYAAAAPQ-DPS 386
LNG+ +G QN+RLSWGR+P+NKQ + D NQWN G YY Y YGY AAAP DP
Sbjct: 241 LNGSTIGKQNVRLSWGRNPANKQFRGDNGNQWNNGGMYYAAPPFYNGYGYPAAAPFPDPG 300
Query: 387 MY----YGGYPGYGNYQQ 400
MY YG YP YGN QQ
Sbjct: 301 MYAAPAYGAYPFYGNQQQ 318
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L F+ GE+ +VK+ KQ GF++F R AE LQ
Sbjct: 187 TVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQC------GFVQFAQRKNAEDALQG 240
Query: 143 FNGTPMPNGEQNFRLNWA 160
NG+ + G+QN RL+W
Sbjct: 241 LNGSTI--GKQNVRLSWG 256
>gi|388505308|gb|AFK40720.1| unknown [Medicago truncatula]
Length = 454
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/304 (61%), Positives = 225/304 (74%), Gaps = 24/304 (7%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P EIRT+W+GDL +WMDET+L+ CFAHTGEV + KVIRNKQTGQ EGYGF+EF +RA AE
Sbjct: 112 PEEIRTIWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNKQTGQSEGYGFVEFYTRAMAE 171
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASF----GAGEKR--DDTPDHTIFVGDLAADVTDYMLQ 191
+VLQ FNGT MPN +Q FRLNWA+F G GE+R + T D ++FVGDLA DVTD MLQ
Sbjct: 172 KVLQNFNGTMMPNTDQAFRLNWATFSAAGGGGERRSSEATSDLSVFVGDLAIDVTDAMLQ 231
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
ETF +++ S KGAKVVID TGR+KGYGFVRFGDESE+ RAMTEMNGV+CS+RPMR+G A
Sbjct: 232 ETFASKFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRVGVA 291
Query: 252 TNKKTVSASYQNS------------------QVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
T KKT Q S Q +QS+ D NNTT+FVG LDS ++DE LR
Sbjct: 292 TPKKTYGNPQQYSSQAVVLAGGGGHSNGAMAQGSQSEGDSNNTTIFVGGLDSDISDEDLR 351
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
+ F Q+G ++ VKIP GK CGFVQ ADR AEEA++ LNGT +G Q +RLSWGRSP NK
Sbjct: 352 QPFLQFGDVISVKIPVGKGCGFVQLADRKNAEEAIQGLNGTVIGKQTVRLSWGRSPGNKH 411
Query: 354 AQPD 357
+ D
Sbjct: 412 WRND 415
>gi|224105517|ref|XP_002313840.1| predicted protein [Populus trichocarpa]
gi|222850248|gb|EEE87795.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/306 (61%), Positives = 231/306 (75%), Gaps = 20/306 (6%)
Query: 76 GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAG 135
G E +T+W+GDL +WMDETYL+ CF+HTGEV +VK+IRNKQTGQ+EGYGF+EF S A
Sbjct: 74 GSNEEAKTVWVGDLLHWMDETYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYSHAA 133
Query: 136 AERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETF 194
AE+VLQ+++G+ MPN +Q FRLNWASF AGE+R D D +IFVGDLAADVTD MLQETF
Sbjct: 134 AEKVLQSYSGSMMPNTDQPFRLNWASF-AGERRADAGSDLSIFVGDLAADVTDAMLQETF 192
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+Y S KGAKVV D TGR+KGYGFVRFGDE+E+ RA+TEMNG +CS+RPMRIG AT K
Sbjct: 193 ATKYASVKGAKVVADSNTGRSKGYGFVRFGDENEKTRAITEMNGAYCSSRPMRIGVATPK 252
Query: 255 KTVSASYQNS-----------------QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 297
K + Q S Q +QSD D NNTT+FVG +DS VTDE LR+ FS
Sbjct: 253 KPSAYQQQYSSQALVLAGGHASNGTMAQGSQSDGDSNNTTIFVGGIDSDVTDEDLRQPFS 312
Query: 298 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD 357
Q+G++V VK+P GK C FVQFA+R AE+AL+ LNGT +G Q +RLSWGR+P+NKQ + D
Sbjct: 313 QFGEVVSVKMPTGKGCAFVQFANRKNAEDALQSLNGTTIGKQTVRLSWGRTPANKQWRGD 372
Query: 358 P-NQWN 362
NQW+
Sbjct: 373 HGNQWH 378
>gi|357454295|ref|XP_003597428.1| RNA-binding protein [Medicago truncatula]
gi|355486476|gb|AES67679.1| RNA-binding protein [Medicago truncatula]
Length = 428
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/343 (58%), Positives = 239/343 (69%), Gaps = 40/343 (11%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYW+DE YL CF+HTGEV+++K+IRNK TGQ EGYGFIEF+S + AERV
Sbjct: 13 EVRTLWIGDLQYWVDENYLTHCFSHTGEVISIKIIRNKITGQPEGYGFIEFVSHSAAERV 72
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQT+NGT MP EQ FRLNWASFG GE+R D PDH+IFVGDLA DVTDY+LQETFR Y
Sbjct: 73 LQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRTHY 132
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S +GAKVV D TGR+KGYGFV+F DESE+ RAM+EMNGV+CSTRPMRI AT KKT
Sbjct: 133 GSVRGAKVVTDPNTGRSKGYGFVKFSDESERNRAMSEMNGVYCSTRPMRISAATPKKT-- 190
Query: 259 ASYQNSQVAQS--------------------------DDDPNNTTVFVGNLDSIVTDEHL 292
YQ + A + D NNTT++VGNLD V++E L
Sbjct: 191 TGYQQNPYAAVVAAAPVPKAIYPVPAYTTAPVNTVPPEYDVNNTTIYVGNLDLNVSEEEL 250
Query: 293 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
++ F Q+G++V VK+ GK CGFVQF R+ AEEA++ + G LG Q IR+SWGR + +
Sbjct: 251 KQNFLQFGEIVSVKVHPGKACGFVQFGARASAEEAIQKMQGKILGQQVIRVSWGRPQTAR 310
Query: 353 QAQP-------DPNQWNAGYYGYAQ-GYENYGYAAAAPQDPSM 387
Q P D +QW+A YYGY Q GYE Y Y AA QDPSM
Sbjct: 311 QDVPGGWGQQVDQSQWSA-YYGYGQPGYEAYAYGAA--QDPSM 350
>gi|449455232|ref|XP_004145357.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 436
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/311 (61%), Positives = 231/311 (74%), Gaps = 23/311 (7%)
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
P++QG E++TLWIGDLQ WMDETYLN CFAHTGEV +VKVI NKQTGQ EGYGF+EF
Sbjct: 90 PRRQGSTDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFF 149
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYML 190
S AE+VLQ +NGT MPN E FRLNWA+F A ++R DT D +IFVGDLAADVTD +L
Sbjct: 150 SHTTAEKVLQNYNGTIMPNTELPFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAIL 209
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
QETF +RY S KGAKVVID +G +KGYGF RFGDE+E+ RAMTEMNG++CS+RPMRIG
Sbjct: 210 QETFSSRYTSVKGAKVVIDSNSGPSKGYGF-RFGDENERTRAMTEMNGIYCSSRPMRIGV 268
Query: 251 ATNKKTVSASYQNS------------------QVAQSDDDPNNTTVFVGNLDSIVTDEHL 292
AT KK ++ YQ Q +QSD + NNTT+FVG LDS V+DE L
Sbjct: 269 ATPKK--ASGYQQGYASQALVLAGGHPNGMAVQGSQSDSESNNTTIFVGGLDSDVSDEDL 326
Query: 293 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
++ FS++G +V VKIP GK CGFVQFA+R AE+A++ LNGT +G Q +RLSWGRS NK
Sbjct: 327 KQAFSKFGDVVSVKIPIGKGCGFVQFANRKNAEDAIQGLNGTVIGKQTVRLSWGRSTGNK 386
Query: 353 QAQPDP-NQWN 362
Q + D NQWN
Sbjct: 387 QWRGDSNNQWN 397
>gi|242073268|ref|XP_002446570.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
gi|241937753|gb|EES10898.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
Length = 423
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/325 (58%), Positives = 243/325 (74%), Gaps = 8/325 (2%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E +T+W+GDLQYWMDE YL++CF +GEVV +KVIRN+QTGQ EGYGF+EF S A AE+
Sbjct: 99 ENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKA 158
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQ F G MPN ++ F+LNWAS+ GEKR + DH+IFVGDLAADVTD ML E F ++Y
Sbjct: 159 LQNFTGHVMPNTDRAFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKY 218
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S KGAKV+ID TGR++GYGFVRFGD++++ AM+EMNGV+CSTRP+RIGPAT +++
Sbjct: 219 RSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIGPATPRRSSG 278
Query: 259 ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQF 318
S ++ SD D +N TV+VG LD V+++ LR+ F++YG L VKIP GK+CGFVQF
Sbjct: 279 DSGSSTP-GHSDGDSSNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPLGKQCGFVQF 337
Query: 319 ADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAGYYGYAQGYENYGY 377
A R+ AEEAL+ LNG+ +G Q +RLSWGRSPS+KQ++ D N+ N YYG Y YGY
Sbjct: 338 ASRTDAEEALQGLNGSLIGKQAVRLSWGRSPSHKQSRGDSGNRRNNMYYG-TPFYGGYGY 396
Query: 378 AAAAPQDPSMY---YGGYPGYGNYQ 399
A+ P P+MY YG YP YGN Q
Sbjct: 397 ASPVPH-PNMYAAAYGAYPMYGNQQ 420
>gi|356541995|ref|XP_003539457.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/330 (56%), Positives = 235/330 (71%), Gaps = 30/330 (9%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYW+DE+YL+ CFAH+GEVV++K+IRNK TGQ EGYGF+EF+S A AE
Sbjct: 8 EVRTLWIGDLQYWVDESYLSQCFAHSGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAF 67
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
L+TFNG MP +Q FRLNWASFG D PDH+IFVGDLA DVTD++LQETFRA YP
Sbjct: 68 LRTFNGAQMPGTDQTFRLNWASFG-----DSGPDHSIFVGDLAPDVTDFILQETFRAHYP 122
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S KG+KVV D TGR+KGYGFV+F DE+++ RAMTEMNGV+CSTRPMRI AT KK S
Sbjct: 123 SVKGSKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASF 182
Query: 260 SYQNS---------------QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 304
+Q + ++D NNTTV +GNLD VT+E L++ F Q+G +V
Sbjct: 183 QHQYAPPKAMYQFPAYTAPVSTVAPENDVNNTTVCIGNLDLNVTEEELKQAFVQFGDIVL 242
Query: 305 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ-------AQPD 357
VKI AGK G+VQF R+ AE+A++ + G +G Q I++SWG + + +Q AQ D
Sbjct: 243 VKIYAGKGYGYVQFGTRASAEDAIQRMQGKVIGQQVIQISWGSTLTARQDVPGGWGAQMD 302
Query: 358 PNQWNAGYYGYAQGYENYGYAAAAPQDPSM 387
P+QW+A YYGY QGYE+Y Y A DPS+
Sbjct: 303 PSQWSA-YYGYGQGYESYAYGAT--HDPSL 329
>gi|356541997|ref|XP_003539458.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/323 (57%), Positives = 233/323 (72%), Gaps = 25/323 (7%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYW+DE+YL+ CFAH+GEVV++K+IRNK TGQ EGYGF+EF+S A AE
Sbjct: 8 EVRTLWIGDLQYWVDESYLSQCFAHSGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAF 67
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
L+TFNG MP +Q FRLNWASFG D PDH+IFVGDLA DVTD++LQETFRA YP
Sbjct: 68 LRTFNGAQMPGTDQTFRLNWASFG-----DSGPDHSIFVGDLAPDVTDFILQETFRAHYP 122
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S KG+KVV D TGR+KGYGFV+F DE+++ RAMTEMNGV+CSTRPMRI AT KK S
Sbjct: 123 SVKGSKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASF 182
Query: 260 SYQNS---------------QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 304
+Q + ++D NNTTV +GNLD VT+E L++ F Q+G +V
Sbjct: 183 QHQYAPPKAMYQFPAYTAPVSTVAPENDVNNTTVCIGNLDLNVTEEELKQAFVQFGDIVL 242
Query: 305 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAG 364
VKI AGK G+VQF R+ AE+A++ + G +G Q I++SWG + + +Q DP+QW+A
Sbjct: 243 VKIYAGKGYGYVQFGTRASAEDAIQRMQGKVIGQQVIQISWGSTLTARQM--DPSQWSA- 299
Query: 365 YYGYAQGYENYGYAAAAPQDPSM 387
YYGY QGYE+Y Y A DPS+
Sbjct: 300 YYGYGQGYESYAYGAT--HDPSL 320
>gi|212722984|ref|NP_001132004.1| uncharacterized protein LOC100193409 [Zea mays]
gi|194693170|gb|ACF80669.1| unknown [Zea mays]
Length = 422
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/299 (62%), Positives = 226/299 (75%), Gaps = 5/299 (1%)
Query: 59 QAAAPQAAGV--AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRN 116
Q AAP A V + P Q GQ E +T+W+GDL +WMDE YL+ CF +TGEVVA+KVIRN
Sbjct: 68 QLAAPVPAVVLGSPAPHQAGQE-ENKTIWVGDLHFWMDENYLHNCFGYTGEVVAIKVIRN 126
Query: 117 KQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHT 175
KQTGQ EGYGF+EF S A AERVL+ F+G MPN +Q FRLNWASF G++R D DH+
Sbjct: 127 KQTGQSEGYGFVEFYSHAAAERVLEGFSGHIMPNTDQPFRLNWASFSMGDRRSDVASDHS 186
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
IFVGDLA+DV D L E F +RY S KGAKVVID TGR+KGYGFVRFGD+SE+ AMTE
Sbjct: 187 IFVGDLASDVNDATLLEVFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKTHAMTE 246
Query: 236 MNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSD-DDPNNTTVFVGNLDSIVTDEHLRE 294
MNGV+CS+RPMRIGPAT +K+ S N A+ D D NTTVFVG LD V++E LR+
Sbjct: 247 MNGVYCSSRPMRIGPATPRKSSGTSGSNGSSARPDGGDLTNTTVFVGGLDPDVSEEDLRQ 306
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
FSQYG++ VKIP GK+CGFVQFA R AE+AL+ LNG+ +G Q +RLSWGR+P+NKQ
Sbjct: 307 AFSQYGEISSVKIPVGKQCGFVQFAQRKNAEDALQGLNGSTIGKQAVRLSWGRNPANKQ 365
>gi|449470045|ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449496017|ref|XP_004160013.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 429
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 223/422 (52%), Positives = 275/422 (65%), Gaps = 39/422 (9%)
Query: 13 PPPMAAHQYQYQQQAPPQQQPPPQ-------PSPYMMM----MPPQPQAQPPA---MWAT 58
P AAHQ + QQ +QP PQ P+ M+M MPPQ PP+ +
Sbjct: 10 PQQQAAHQTEQNQQT--HKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPPPSPHYIPYR 67
Query: 59 QAAAP-QAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK 117
Q P Q G QG E +T+W+GDLQ+WMDE YL++CFA TGE+ ++KVIRNK
Sbjct: 68 QYPPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGEISSLKVIRNK 127
Query: 118 QTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTI 176
QTG EGYGF+EF S AE+VLQ ++ MPN EQ FRLNWA+F G+KR + D +I
Sbjct: 128 QTGISEGYGFVEFFSHTTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSENGSDLSI 187
Query: 177 FVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM 236
FVGDLAADVTD +L ETF ++Y S K AKVV D TG +KGYGFVRFGD++E+ +AMTEM
Sbjct: 188 FVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMTEM 247
Query: 237 NGVFCSTRPMRIGPATNKKTVSASYQN-------------SQVAQSDDDPNNTTVFVGNL 283
NG++CS+RPMRIG AT KK S+ YQ S QSD D NTT+F+G L
Sbjct: 248 NGIYCSSRPMRIGAATPKK--SSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIGGL 305
Query: 284 DSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRL 343
D VTDE L++LFSQ+G++V VKIP GK CGF+QFA+R AEEAL+ LNGT +G Q +RL
Sbjct: 306 DPNVTDEDLKQLFSQHGEIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTVRL 365
Query: 344 SWGRSPSNKQAQPD-PNQWNAGYYGYAQGYENYGYAAAAPQD-PSMY---YGGYPGYGNY 398
SWGRSP+NKQ + D N W+ Y Q Y YGYA P D P+MY YG YP YG +
Sbjct: 366 SWGRSPTNKQYRGDYGNHWSGA-YYGGQVYGGYGYALPLPYDPPTMYAAAYGAYPMYGTH 424
Query: 399 QQ 400
QQ
Sbjct: 425 QQ 426
>gi|145334517|ref|NP_001078604.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332005307|gb|AED92690.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 421
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/344 (56%), Positives = 232/344 (67%), Gaps = 25/344 (7%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYW+DE YL +CF+ TGE+V+VKVIRNK TGQ EGYGFIEFIS A AER
Sbjct: 22 EVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERT 81
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NGT MP E FRLNWASFG+G+K D PDH+IFVGDLA DVTDY+LQETFR Y
Sbjct: 82 LQTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYS 141
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S +GAKVV D TGR+KGYGFV+F +ESE+ RAM EMNG++CSTRPMRI AT KK V
Sbjct: 142 SVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKKNVGV 201
Query: 260 SYQ---------------NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 304
Q + VA + D TT+ V NLD VT+E L++ FSQ G++++
Sbjct: 202 QQQYVTKVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEELKKAFSQLGEVIY 261
Query: 305 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK--QAQPDPNQWN 362
VKIPA K G+VQF R AEEA++ + G +G Q +R+SW ++P Q DPNQWN
Sbjct: 262 VKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNPGQDGWVTQADPNQWN 321
Query: 363 AGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQPQQ 406
Y G YA A QDPS+Y YG Y PQ PQQ
Sbjct: 322 G---YYGYGQGYDAYAYGATQDPSVY-----AYGGYGYPQYPQQ 357
>gi|15220241|ref|NP_175181.1| RNA-binding protein 47C' [Arabidopsis thaliana]
gi|75337808|sp|Q9SX80.1|R47CP_ARATH RecName: Full=Polyadenylate-binding protein RBP47C';
Short=Poly(A)-binding protein RBP47C'; AltName:
Full=RNA-binding protein 47C'; Short=AtRBP47C prime;
Short=AtRBP47C'
gi|5668811|gb|AAD46037.1|AC007519_22 Contains 3 PF|00076 RNA recognition motif domains. EST gb|T20424
comes from this gene [Arabidopsis thaliana]
gi|110743035|dbj|BAE99410.1| hypothetical protein [Arabidopsis thaliana]
gi|124301030|gb|ABN04767.1| At1g47500 [Arabidopsis thaliana]
gi|332194057|gb|AEE32178.1| RNA-binding protein 47C' [Arabidopsis thaliana]
Length = 434
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/334 (58%), Positives = 236/334 (70%), Gaps = 14/334 (4%)
Query: 79 GEIRTLWIGDLQYWMDETYLNTCF--AHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
GE +T+W+GDLQ WMDE YLN+ F A E+V++KVIRNK G EGYGF+EF S A
Sbjct: 100 GENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVA 159
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQETF 194
++VLQ FNG PMPN +Q FRLNWASF GEKR ++ PD +IFVGDLA DV+D +L ETF
Sbjct: 160 DKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDALLHETF 219
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+YPS K AKVV+D TGR+KGYGFVRFGDE+E+ +AMTEMNGV CS+R MRIGPAT +
Sbjct: 220 SEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPR 279
Query: 255 KTVSASYQ-----NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 309
KT Q + +S+ D NTT+FVG LDS VTDE L++ FS++G++V VKIP
Sbjct: 280 KTNGYQQQGGYMPSGAFTRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPV 339
Query: 310 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD-PNQWNAGYYGY 368
GK CGFVQF +R AEEAL LNGT +G Q +RLSWGR+P+NKQ + NQW YYG
Sbjct: 340 GKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYG- 398
Query: 369 AQGYENYGYAAAAPQDPSMYYGG--YPGYGNYQQ 400
Q Y YGY P DP MY YP YG +QQ
Sbjct: 399 GQFYNGYGYMVPQP-DPRMYPAAPYYPMYGGHQQ 431
>gi|302795494|ref|XP_002979510.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
gi|300152758|gb|EFJ19399.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
Length = 432
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/317 (59%), Positives = 221/317 (69%), Gaps = 33/317 (10%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMDE YL FAHTGEV++ KVIRNKQTG EGYGFIEF S AERV
Sbjct: 26 EVRTLWIGDLQYWMDENYLRNLFAHTGEVLSAKVIRNKQTGYPEGYGFIEFNSHPAAERV 85
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARY 198
L +NGT MP EQ FRLNWASFG GEKR D P+ +IFVGDLA DVTDYML ETFR R+
Sbjct: 86 LLAYNGTQMPQTEQAFRLNWASFGMGEKRMDGGPELSIFVGDLAPDVTDYMLHETFRTRF 145
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS +GAKVVID +TGR+KGYGFVRF DE+E+ RAM+EMNGV+CS+RPMRI AT KK ++
Sbjct: 146 PSVRGAKVVIDAVTGRSKGYGFVRFADENERARAMSEMNGVYCSSRPMRISAATPKKAMA 205
Query: 259 ASYQN-------------------------SQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
A SQV D DP NTT+FVG LD +T+E ++
Sbjct: 206 AGLTTVTAATIVPQPTIASPITPPPSLSIQSQVLPPDSDPTNTTIFVGGLDLNITEEEVK 265
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP-SNK 352
+ FS G+LV VKIP GK C FVQ+A R+ AE+AL+ L+GT +G Q IRLSWGRSP S K
Sbjct: 266 QTFSHIGELVSVKIPPGKGCAFVQYAQRNSAEDALQRLHGTVIGQQAIRLSWGRSPTSTK 325
Query: 353 QAQPDP------NQWNA 363
QA P QWN+
Sbjct: 326 QAPTSPWRDAAQTQWNS 342
>gi|15230291|ref|NP_188544.1| RNA-binding protein 47B [Arabidopsis thaliana]
gi|122246579|sp|Q0WW84.1|RB47B_ARATH RecName: Full=Polyadenylate-binding protein RBP47B;
Short=Poly(A)-binding protein RBP47B; AltName:
Full=RNA-binding protein 47B; Short=AtRBP47B
gi|110741040|dbj|BAE98614.1| putative nuclear acid binding protein [Arabidopsis thaliana]
gi|111074446|gb|ABH04596.1| At3g19130 [Arabidopsis thaliana]
gi|332642675|gb|AEE76196.1| RNA-binding protein 47B [Arabidopsis thaliana]
Length = 435
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/311 (57%), Positives = 225/311 (72%), Gaps = 21/311 (6%)
Query: 75 QGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRA 134
+G +++TLW+GDL +WMDETYL++CF+HTGEV +VKVIRNK T Q EGYGF+EF+SRA
Sbjct: 101 RGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRA 160
Query: 135 GAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQE 192
AE VLQ ++G+ MPN +Q FR+NWASF GEKR ++ PD ++FVGDL+ DVTD +L E
Sbjct: 161 AAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHE 220
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
TF RYPS K AKVVID TGR+KGYGFVRFGDE+E+ RA+TEMNG +CS R MR+G AT
Sbjct: 221 TFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIAT 280
Query: 253 NKKTVSASYQNSQVA-----------------QSDDDPNNTTVFVGNLDSIVTDEHLREL 295
K+ ++ Q+S A QSD + N T+FVG +D V DE LR+
Sbjct: 281 PKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQP 340
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
FSQ+G++V VKIP GK CGFVQFADR AE+A+ LNGT +G +RLSWGRSP NKQ +
Sbjct: 341 FSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQWR 399
Query: 356 PDPN-QWNAGY 365
D QWN GY
Sbjct: 400 GDSGQQWNGGY 410
>gi|15239715|ref|NP_197436.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331115|sp|Q8VXZ9.1|R47BP_ARATH RecName: Full=Polyadenylate-binding protein RBP47B';
Short=Poly(A)-binding protein RBP47B'; AltName:
Full=RNA-binding protein 47B'; Short=AtRBP47B prime;
Short=AtRBP47B'
gi|18377731|gb|AAL67015.1| putative DNA binding protein ACBF [Arabidopsis thaliana]
gi|21281189|gb|AAM45052.1| putative DNA binding protein ACBF [Arabidopsis thaliana]
gi|332005306|gb|AED92689.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 425
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/348 (55%), Positives = 232/348 (66%), Gaps = 29/348 (8%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYW+DE YL +CF+ TGE+V+VKVIRNK TGQ EGYGFIEFIS A AER
Sbjct: 22 EVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERT 81
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NGT MP E FRLNWASFG+G+K D PDH+IFVGDLA DVTDY+LQETFR Y
Sbjct: 82 LQTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYS 141
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S +GAKVV D TGR+KGYGFV+F +ESE+ RAM EMNG++CSTRPMRI AT KK V
Sbjct: 142 SVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKKNVGV 201
Query: 260 SYQ-------------------NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 300
Q + VA + D TT+ V NLD VT+E L++ FSQ G
Sbjct: 202 QQQYVTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEELKKAFSQLG 261
Query: 301 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK--QAQPDP 358
++++VKIPA K G+VQF R AEEA++ + G +G Q +R+SW ++P Q DP
Sbjct: 262 EVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNPGQDGWVTQADP 321
Query: 359 NQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQPQQ 406
NQWN Y G YA A QDPS+Y YG Y PQ PQQ
Sbjct: 322 NQWNG---YYGYGQGYDAYAYGATQDPSVY-----AYGGYGYPQYPQQ 361
>gi|219888851|gb|ACL54800.1| unknown [Zea mays]
gi|414589690|tpg|DAA40261.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 322
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 199/320 (62%), Positives = 234/320 (73%), Gaps = 12/320 (3%)
Query: 93 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE 152
MDE YL+ CF +TGEVVA+KVIRNKQTGQ EGYGF+EF S A AERVL+ F+G MPN +
Sbjct: 1 MDENYLHNCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAERVLEGFSGHIMPNTD 60
Query: 153 QNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRL 211
Q FRLNWASF G++R D DH+IFVGDLA+DV D L E F +RY S KGAKVVID
Sbjct: 61 QPFRLNWASFSMGDRRSDVASDHSIFVGDLASDVNDATLLEVFSSRYSSVKGAKVVIDAN 120
Query: 212 TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSD- 270
TGR+KGYGFVRFGD+SE+ AMTEMNGV+CS+RPMRIGPAT +K+ S N A+ D
Sbjct: 121 TGRSKGYGFVRFGDDSEKTHAMTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSSARPDG 180
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRM 330
D NTTVFVG LD V++E LR+ FSQYG++ VKIP GK+CGFVQFA R AE+AL+
Sbjct: 181 GDLTNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQCGFVQFAQRKNAEDALQG 240
Query: 331 LNGTQLGGQNIRLSWGRSPSNKQAQPDPN--QW-NAGYYGYAQGYEN--YGYAAAAPQ-D 384
LNG+ +G Q +RLSWGR+P+NKQ + D QW N G Y A + N YGY AAAP D
Sbjct: 241 LNGSTIGKQAVRLSWGRNPANKQFRGDNGNMQWKNGGVYYAAPPFYNGGYGYPAAAPFPD 300
Query: 385 PSMY----YGGYPGYGNYQQ 400
P MY YG YP YGN QQ
Sbjct: 301 PGMYAAPAYGAYPFYGNQQQ 320
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L F+ GE+ +VK+ KQ GF++F R AE LQ
Sbjct: 187 TVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQC------GFVQFAQRKNAEDALQG 240
Query: 143 FNGTPMPNGEQNFRLNWA 160
NG+ + G+Q RL+W
Sbjct: 241 LNGSTI--GKQAVRLSWG 256
>gi|21618243|gb|AAM67293.1| nuclear acid binding protein, putative [Arabidopsis thaliana]
Length = 392
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 180/311 (57%), Positives = 225/311 (72%), Gaps = 21/311 (6%)
Query: 75 QGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRA 134
+G +++TLW+GDL +WMDETYL++CF+HTGEV +VKVIRNK T Q EGYGF+EF+SRA
Sbjct: 58 RGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRA 117
Query: 135 GAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQE 192
AE VLQ ++G+ MPN +Q FR+NWASF GEKR ++ PD ++FVGDL+ DVTD +L E
Sbjct: 118 AAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHE 177
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
TF RYPS K AKVVID TGR+KGYGFVRFGDE+E+ RA+TEMNG +CS R MR+G AT
Sbjct: 178 TFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIAT 237
Query: 253 NKKTVSASYQNSQVA-----------------QSDDDPNNTTVFVGNLDSIVTDEHLREL 295
K+ ++ Q+S A QSD + N T+FVG +D V DE LR+
Sbjct: 238 PKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQP 297
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
FSQ+G++V VKIP GK CGFVQFADR AE+A+ LNGT +G +RLSWGRSP NKQ +
Sbjct: 298 FSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQWR 356
Query: 356 PDPN-QWNAGY 365
D QWN GY
Sbjct: 357 GDSGQQWNGGY 367
>gi|357149687|ref|XP_003575198.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 421
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 183/322 (56%), Positives = 233/322 (72%), Gaps = 6/322 (1%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+W+GDLQYWMDE YL++CF +GEVV +KVIRN+ +G EGYGF+EF S A AE+ LQ
Sbjct: 99 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 158
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDD-TPDHTIFVGDLAADVTDYMLQETFRARYPS 200
F G MPN ++ F+LNWAS+ GEKR + DH+IFVGDLA DVTD ML E F +Y S
Sbjct: 159 NFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRS 218
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
KGAKV+ID TGR++GYGFVRFGD++++ AMTEMNGV+CSTRP+RIGPAT ++T S
Sbjct: 219 VKGAKVIIDANTGRSRGYGFVRFGDDNDRTHAMTEMNGVYCSTRPIRIGPATPRRT-SGD 277
Query: 261 YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFAD 320
+S QSD D N TV+VG LD V+++ LR+ F++YG + VKIP GK+CGFVQF +
Sbjct: 278 SGSSPPRQSDGDLTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFVN 337
Query: 321 RSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAA 380
R+ AEEAL+ L+G+ +G Q +RLSWGRSP++KQ + D G Y Y YGYA+
Sbjct: 338 RADAEEALQALSGSTIGKQAVRLSWGRSPASKQPRGDSGHRRNGMYYGTPFYGGYGYASP 397
Query: 381 APQDPSMY---YGGYPGYGNYQ 399
P P+MY YG YP YGN Q
Sbjct: 398 VPH-PNMYAAAYGAYPFYGNQQ 418
>gi|15220233|ref|NP_175180.1| RNA-binding protein 47C [Arabidopsis thaliana]
gi|75337807|sp|Q9SX79.1|RB47C_ARATH RecName: Full=Polyadenylate-binding protein RBP47C;
Short=Poly(A)-binding protein RBP47C; AltName:
Full=RNA-binding protein 47C; Short=AtRBP47C
gi|5668812|gb|AAD46038.1|AC007519_23 Contains 3 PF|00076 RNA recognition motif domains. ESTs gb|R30092,
gb|R30093, gb|AA394338, gb|N65719 and gb|AA597577 come
from this gene [Arabidopsis thaliana]
gi|12744993|gb|AAK06876.1|AF344325_1 putative DNA binding protein [Arabidopsis thaliana]
gi|14334552|gb|AAK59684.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17065624|gb|AAL33806.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332194053|gb|AEE32174.1| RNA-binding protein 47C [Arabidopsis thaliana]
Length = 432
Score = 368 bits (944), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 192/334 (57%), Positives = 236/334 (70%), Gaps = 14/334 (4%)
Query: 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGE--VVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
GE +T+W+GDL +WMDE YLN+ FA E +V+VKVIRNK G EGYGF+EF S A
Sbjct: 98 GENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVA 157
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQETF 194
++VL+ FNGT MPN +Q FRLNWASF GEKR ++ PD +IFVGDL+ DV+D +L ETF
Sbjct: 158 DKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETF 217
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+YPS K AKVV+D TGR+KGYGFVRFGDE+E+ +AMTEMNGV CS+R MRIGPAT +
Sbjct: 218 SEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPR 277
Query: 255 KTVSASYQ-----NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 309
KT Q N + + + D NTT+FVG LDS VTDE L++ F+++G++V VKIP
Sbjct: 278 KTNGYQQQGGYMPNGTLTRPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPV 337
Query: 310 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD-PNQWNAGYYGY 368
GK CGFVQF +R AEEAL LNGT +G Q +RLSWGR+P+NKQ + NQW YYG
Sbjct: 338 GKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYG- 396
Query: 369 AQGYENYGYAAAAPQDPSMYYGG--YPGYGNYQQ 400
Q Y YGY P DP MY YP YG +QQ
Sbjct: 397 GQFYNGYGYMVPQP-DPRMYPAAPYYPMYGGHQQ 429
>gi|357163840|ref|XP_003579863.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 428
Score = 367 bits (941), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 181/310 (58%), Positives = 233/310 (75%), Gaps = 5/310 (1%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E +T+W+GDLQYWMDE YL++CF +GEVV +KVIRN+QTGQ EGYGF+EF S A A++
Sbjct: 102 ENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQTEGYGFVEFYSHASADKA 161
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQ F G MPN ++ F+LNWAS+ GEKR + DH+IFVGDLAADVTD ML E F ++Y
Sbjct: 162 LQNFTGHAMPNTDRPFKLNWASYSMGEKRSEVVSDHSIFVGDLAADVTDEMLMELFASKY 221
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S KGAKV+ID TGR++GYGFVRFG++S++ RAMTEMNGV+CSTRP+RIGPAT ++T
Sbjct: 222 RSVKGAKVIIDANTGRSRGYGFVRFGEDSDKSRAMTEMNGVYCSTRPIRIGPATPRRTAG 281
Query: 259 ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQF 318
S +S SD D N TV+VG LD V+++ LR+ F++YG + VKIP GK+CGFVQ+
Sbjct: 282 DS-GSSTPGHSDGDSTNRTVYVGGLDPNVSEDELRKSFAKYGDVASVKIPQGKQCGFVQY 340
Query: 319 ADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAGYYGYAQGYENYGY 377
+R+ AEEAL+ LNG+ +G Q +RLSWGRSPS+KQ + D N+ N YYG Y YGY
Sbjct: 341 VNRTDAEEALQGLNGSVIGKQAVRLSWGRSPSHKQPRGDSGNRRNNMYYG-TPFYGGYGY 399
Query: 378 AAAAPQDPSM 387
A+ P P+M
Sbjct: 400 ASPVPH-PNM 408
>gi|302792090|ref|XP_002977811.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
gi|300154514|gb|EFJ21149.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
Length = 455
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 191/335 (57%), Positives = 222/335 (66%), Gaps = 51/335 (15%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMDE YL FAHTGEV++ KVIRNKQTG EGYGFIEF S AERV
Sbjct: 26 EVRTLWIGDLQYWMDENYLRNLFAHTGEVLSAKVIRNKQTGYPEGYGFIEFNSHPAAERV 85
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARY 198
L +NGT MP EQ FRLNWASFG GEKR D P+ +IFVGDLA DVTDYML ETFR R+
Sbjct: 86 LLAYNGTQMPQTEQAFRLNWASFGMGEKRMDGGPELSIFVGDLAPDVTDYMLHETFRTRF 145
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS +GAKVVID +TGR+KGYGFVRF DE+E+ RAM+EMNGV+CS+RPMRI AT KK ++
Sbjct: 146 PSVRGAKVVIDAVTGRSKGYGFVRFADENERARAMSEMNGVYCSSRPMRISAATPKKAMA 205
Query: 259 ASYQN-------------------------------------------SQVAQSDDDPNN 275
A SQV D DP N
Sbjct: 206 AGLTTVTAATIVPQPTIASPFKAATTTTTPTYQTMPYSITPPPSLSIQSQVLPPDSDPTN 265
Query: 276 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQ 335
TT+FVG LD +T+E +++ FSQ G+LV VKIP GK C FVQ+A R+ AE+AL+ L+GT
Sbjct: 266 TTIFVGGLDLNITEEEVKQTFSQIGELVSVKIPPGKGCAFVQYAQRNSAEDALQRLHGTV 325
Query: 336 LGGQNIRLSWGRSP-SNKQAQPDP------NQWNA 363
+G Q IRLSWGRSP S KQA P QWN+
Sbjct: 326 IGQQAIRLSWGRSPTSTKQAPTSPWGDAAQTQWNS 360
>gi|125548504|gb|EAY94326.1| hypothetical protein OsI_16094 [Oryza sativa Indica Group]
Length = 426
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 188/339 (55%), Positives = 242/339 (71%), Gaps = 12/339 (3%)
Query: 70 VPPQQQGQPG----EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGY 125
PP G G E +T+W+GDLQYWMDE YL++CF +GEVV +KVIRN+QTGQ EGY
Sbjct: 88 TPPAPAGSGGNGCEENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGY 147
Query: 126 GFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAAD 184
GF+EF S AE+ LQ F G MPN ++ F+LNWAS+ GEKR + D++IFVGDLAAD
Sbjct: 148 GFVEFYSHGSAEKALQNFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAAD 207
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
VTD ML E F +Y S KGAKV+ID TGR++GYGFVRFGD++++ AMTEMNG +CSTR
Sbjct: 208 VTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTR 267
Query: 245 PMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 304
P+RIGPAT +++ S ++ SD D N TV+VG LD V+++ LR+ F++YG +
Sbjct: 268 PIRIGPATPRRSSGDSGSSTP-GHSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVAS 326
Query: 305 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNA 363
VKIP GK+CGFVQF R+ AEEAL+ LNG+ +G Q +RLSWGRSPS+KQ++ D ++ N
Sbjct: 327 VKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQAVRLSWGRSPSHKQSRADSGSRRNN 386
Query: 364 GYYGYAQGYENYGYAAAAPQDPSMY---YGGYPGYGNYQ 399
YYG Y YGYA+ P P+MY YG YP YG+ Q
Sbjct: 387 MYYG-TPFYGGYGYASPVPH-PNMYAAAYGAYPVYGSQQ 423
>gi|116310076|emb|CAH67097.1| H0818E04.14 [Oryza sativa Indica Group]
Length = 426
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 188/339 (55%), Positives = 242/339 (71%), Gaps = 12/339 (3%)
Query: 70 VPPQQQGQPG----EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGY 125
PP G G E +T+W+GDLQYWMDE YL++CF +GEVV +KVIRN+QTGQ EGY
Sbjct: 88 TPPAPAGSGGNGCEENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGY 147
Query: 126 GFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAAD 184
GF+EF S AE+ LQ F G MPN ++ F+LNWAS+ GEKR + D++IFVGDLAAD
Sbjct: 148 GFVEFYSHGSAEKALQNFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAAD 207
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
VTD ML E F +Y S KGAKV+ID TGR++GYGFVRFGD++++ AMTEMNG +CSTR
Sbjct: 208 VTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTR 267
Query: 245 PMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 304
P+RIGPAT +++ S ++ SD D N TV+VG LD V+++ LR+ F++YG +
Sbjct: 268 PIRIGPATPRRSSGDSGSSTP-GHSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVAS 326
Query: 305 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNA 363
VKIP GK+CGFVQF R+ AEEAL+ LNG+ +G Q +RLSWGRSPS+KQ++ D ++ N
Sbjct: 327 VKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQAVRLSWGRSPSHKQSRADSGSRRNN 386
Query: 364 GYYGYAQGYENYGYAAAAPQDPSMY---YGGYPGYGNYQ 399
YYG Y YGYA+ P P+MY YG YP YG+ Q
Sbjct: 387 MYYG-TPFYGGYGYASPVPH-PNMYAAAYGAYPVYGSQQ 423
>gi|222641726|gb|EEE69858.1| hypothetical protein OsJ_29658 [Oryza sativa Japonica Group]
Length = 310
Score = 364 bits (934), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 185/300 (61%), Positives = 220/300 (73%), Gaps = 6/300 (2%)
Query: 107 EVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGE 166
+VVA+KVIRNKQTGQ EGYGF+EF S A AE+VL+ F G MPN +Q FR+NWASF G+
Sbjct: 9 QVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFAGHIMPNTDQPFRINWASFSMGD 68
Query: 167 KRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGD 225
+R D DH+IFVGDLA+DV D L ETF RY S KGAKVVID TGR+KGYGFVRFGD
Sbjct: 69 RRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGD 128
Query: 226 ESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDS 285
++E+ AMTEMNGV+CSTRPMRIGPAT +KT S A+SD D NTTVFVG LD
Sbjct: 129 DNEKTHAMTEMNGVYCSTRPMRIGPATPRKTSGTSGPTGSAARSDGDLTNTTVFVGGLDP 188
Query: 286 IVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 345
V+++ LR+ FSQYG++ VKIP GK+CGFVQF R AE+AL+ LNG+ +G Q +RLSW
Sbjct: 189 NVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGKQTVRLSW 248
Query: 346 GRSPSNKQAQPDP-NQWNAG-YYGYAQGYENYGYAAAAPQDPSMY---YGGYPGYGNYQQ 400
GR+P+NKQ + D +QWN G YY + Y YGY A P DP MY YG YP YGN QQ
Sbjct: 249 GRNPANKQLRSDNGSQWNNGMYYAASPFYSGYGYPAPFPADPGMYAAAYGAYPFYGNQQQ 308
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 17/177 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
++++GDL +++T L F+ V KV+ + TG+ +GYGF+ F +
Sbjct: 77 HSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKTHAM 136
Query: 141 QTFNGT-----PMPNGEQNFRLNWASFG----AGEKRDDTPDHTIFVGDLAADVTDYMLQ 191
NG PM G R + G A D + T+FVG L +V++ L+
Sbjct: 137 TEMNGVYCSTRPMRIGPATPRKTSGTSGPTGSAARSDGDLTNTTVFVGGLDPNVSEDDLR 196
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248
+TF ++Y K+ + K GFV+F A+ +NG + +R+
Sbjct: 197 QTF-SQYGEISSVKIPVG------KQCGFVQFVQRKNAEDALQGLNGSTIGKQTVRL 246
>gi|226495169|ref|NP_001150649.1| nucleic acid binding protein [Zea mays]
gi|195640856|gb|ACG39896.1| nucleic acid binding protein [Zea mays]
Length = 420
Score = 363 bits (933), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 187/325 (57%), Positives = 239/325 (73%), Gaps = 9/325 (2%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E +T+W+GDLQYWMDE YL+ CF +GEVV +KVIRN+QTGQ EGYGF+EF S A AE+
Sbjct: 97 ENKTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKA 156
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQ F G MPN ++ F+LNWAS+ GEKR + DH+IFVGDLAADVTD ML E F ++Y
Sbjct: 157 LQNFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKY 216
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S KGAKV+ID TGR++GYGFVRFGD++++ AM+EMNGV+CSTRP+RIGPAT +++
Sbjct: 217 RSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIGPATPRRSSG 276
Query: 259 ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQF 318
S ++ SD D +N TV+VG LD V+++ LR+ F++Y L VKIP GK+CGFVQF
Sbjct: 277 DSGSSTP-GHSDGDSSNRTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCGFVQF 334
Query: 319 ADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAGYYGYAQGYENYGY 377
R+ AEEAL+ LNG+ +G Q +RLSW RSPS+KQ++ D N+ N YYG Y YGY
Sbjct: 335 VSRTDAEEALQGLNGSLIGKQAVRLSWVRSPSHKQSRGDSVNRRNNMYYG-TPFYGGYGY 393
Query: 378 AAAAPQDPSMY---YGGYPGYGNYQ 399
A+ P P+MY YG YP YGN Q
Sbjct: 394 ASPVPH-PNMYAAAYGTYPLYGNQQ 417
>gi|194703366|gb|ACF85767.1| unknown [Zea mays]
Length = 420
Score = 363 bits (933), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 187/325 (57%), Positives = 239/325 (73%), Gaps = 9/325 (2%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E +T+W+GDLQYWMDE YL+ CF +GEVV +KVIRN+QTGQ EGYGF+EF S A AE+
Sbjct: 97 ENKTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKA 156
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQ F G MPN ++ F+LNWAS+ GEKR + DH+IFVGDLAADVTD ML E F ++Y
Sbjct: 157 LQNFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKY 216
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S KGAKV+ID TGR++GYGFVRFGD++++ AM+EMNGV+CSTRP+RIGPAT +++
Sbjct: 217 RSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIGPATPRRSSG 276
Query: 259 ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQF 318
S ++ SD D +N TV+VG LD V+++ LR+ F++Y L VKIP GK+CGFVQF
Sbjct: 277 DSGSSTP-GHSDGDSSNRTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCGFVQF 334
Query: 319 ADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAGYYGYAQGYENYGY 377
R+ AEEAL+ LNG+ +G Q +RLSW RSPS+KQ++ D N+ N YYG Y YGY
Sbjct: 335 VSRTDAEEALQGLNGSLIGKQAVRLSWVRSPSHKQSRGDSVNRRNNMYYG-TPFYGGYGY 393
Query: 378 AAAAPQDPSMY---YGGYPGYGNYQ 399
A+ P P+MY YG YP YGN Q
Sbjct: 394 ASPVPH-PNMYAAAYGTYPLYGNQQ 417
>gi|297807995|ref|XP_002871881.1| hypothetical protein ARALYDRAFT_488820 [Arabidopsis lyrata subsp.
lyrata]
gi|297317718|gb|EFH48140.1| hypothetical protein ARALYDRAFT_488820 [Arabidopsis lyrata subsp.
lyrata]
Length = 426
Score = 363 bits (932), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 197/365 (53%), Positives = 237/365 (64%), Gaps = 37/365 (10%)
Query: 71 PPQQQGQ------PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG 124
PPQ QG E+RTLWIGDLQYW+DE YL +CF+ TGE+V+VKVIRNK TGQ EG
Sbjct: 6 PPQPQGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEG 65
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
YGFIEFIS A AER LQT+NGT MP E FRLNWASFG+G+K D PDH+IFVGDLA D
Sbjct: 66 YGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIFVGDLAPD 125
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
VTDY+LQETFR Y S +GAKVV D TGR+KGYGFV+F +ESE+ RAM EMNG++CSTR
Sbjct: 126 VTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTR 185
Query: 245 PMRIGPATNKKTVSASYQ---------------NSQVAQ------SDDDPNNTTVFVGNL 283
PMRI AT KK V Q + +AQ + D TT+ + NL
Sbjct: 186 PMRISAATPKKNVGVQQQYVTKGPVPSAVAAPVQAYIAQPGQGLPPESDVTCTTISIANL 245
Query: 284 DSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRL 343
D VT+E L++ FSQ G++++VKIPA K G+VQF R AEEA++ + G +G Q +R+
Sbjct: 246 DPNVTEEELKKAFSQLGEIIYVKIPATKGYGYVQFKTRPSAEEAVQKMQGQVIGQQAVRI 305
Query: 344 SWGRSPSNK--QAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQP 401
SW ++P AQ DPNQWN Y G Y QDPS+Y YG Y P
Sbjct: 306 SWSKNPGQDGWVAQADPNQWNG---YYGYGQGYDAYGYGTTQDPSLY-----AYGGYGYP 357
Query: 402 QQPQQ 406
Q PQQ
Sbjct: 358 QYPQQ 362
>gi|195620484|gb|ACG32072.1| nucleic acid binding protein [Zea mays]
gi|195625400|gb|ACG34530.1| nucleic acid binding protein [Zea mays]
Length = 369
Score = 363 bits (932), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 187/325 (57%), Positives = 239/325 (73%), Gaps = 9/325 (2%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E +T+W+GDLQYWMDE YL+ CF +GEVV +KVIRN+QTGQ EGYGF+EF S A AE+
Sbjct: 46 ENKTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKA 105
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQ F G MPN ++ F+LNWAS+ GEKR + DH+IFVGDLAADVTD ML E F ++Y
Sbjct: 106 LQNFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKY 165
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S KGAKV+ID TGR++GYGFVRFGD++++ AM+EMNGV+CSTRP+RIGPAT +++
Sbjct: 166 RSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIGPATPRRSSG 225
Query: 259 ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQF 318
S ++ SD D +N TV+VG LD V+++ LR+ F++Y L VKIP GK+CGFVQF
Sbjct: 226 DSGSSTP-GHSDGDSSNRTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCGFVQF 283
Query: 319 ADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAGYYGYAQGYENYGY 377
R+ AEEAL+ LNG+ +G Q +RLSW RSPS+KQ++ D N+ N YYG Y YGY
Sbjct: 284 VSRTDAEEALQGLNGSLIGKQAVRLSWVRSPSHKQSRGDSVNRRNNMYYG-TPFYGGYGY 342
Query: 378 AAAAPQDPSMY---YGGYPGYGNYQ 399
A+ P P+MY YG YP YGN Q
Sbjct: 343 ASPVPH-PNMYAAAYGTYPLYGNQQ 366
>gi|9294614|dbj|BAB02953.1| DNA/RNA binding protein-like [Arabidopsis thaliana]
Length = 489
Score = 361 bits (927), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 174/298 (58%), Positives = 218/298 (73%), Gaps = 20/298 (6%)
Query: 75 QGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRA 134
+G +++TLW+GDL +WMDETYL++CF+HTGEV +VKVIRNK T Q EGYGF+EF+SRA
Sbjct: 101 RGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRA 160
Query: 135 GAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQE 192
AE VLQ ++G+ MPN +Q FR+NWASF GEKR ++ PD ++FVGDL+ DVTD +L E
Sbjct: 161 AAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHE 220
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
TF RYPS K AKVVID TGR+KGYGFVRFGDE+E+ RA+TEMNG +CS R MR+G AT
Sbjct: 221 TFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIAT 280
Query: 253 NKKTVSASYQNSQVA-----------------QSDDDPNNTTVFVGNLDSIVTDEHLREL 295
K+ ++ Q+S A QSD + N T+FVG +D V DE LR+
Sbjct: 281 PKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQP 340
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
FSQ+G++V VKIP GK CGFVQFADR AE+A+ LNGT +G +RLSWGRSP NKQ
Sbjct: 341 FSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQ 397
>gi|218202287|gb|EEC84714.1| hypothetical protein OsI_31675 [Oryza sativa Indica Group]
Length = 377
Score = 361 bits (926), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 185/305 (60%), Positives = 221/305 (72%), Gaps = 6/305 (1%)
Query: 102 FAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS 161
F +VVA+KVIRNKQTGQ EGYGF+EF S A AE+VL+ F G MPN +Q FR+NWAS
Sbjct: 71 FGLMCQVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFAGHIMPNTDQPFRINWAS 130
Query: 162 FGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGF 220
F G++R D DH+IFVGDLA+DV D L ETF RY S KGAKVVID TGR+KGYGF
Sbjct: 131 FSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGF 190
Query: 221 VRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFV 280
VRFGD++E+ AMTEMNGV+CSTRPMRIGPAT +KT S A+SD D NTTVFV
Sbjct: 191 VRFGDDNEKTHAMTEMNGVYCSTRPMRIGPATPRKTSGTSGPTGSAARSDGDLTNTTVFV 250
Query: 281 GNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQN 340
G LD V+++ LR+ FSQYG++ VKIP GK+CGFVQF R AE+AL+ LNG+ +G Q
Sbjct: 251 GGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGKQT 310
Query: 341 IRLSWGRSPSNKQAQPDP-NQWNAG-YYGYAQGYENYGYAAAAPQDPSMY---YGGYPGY 395
+RLSWGR+P+NKQ + D +QWN G +Y + Y YGY A P DP MY YG YP Y
Sbjct: 311 VRLSWGRNPANKQLRSDNGSQWNNGMFYAASPFYSGYGYPAPFPADPGMYAAAYGAYPFY 370
Query: 396 GNYQQ 400
GN QQ
Sbjct: 371 GNQQQ 375
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 17/182 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
++++GDL +++T L F+ V KV+ + TG+ +GYGF+ F +
Sbjct: 144 HSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKTHAM 203
Query: 141 QTFNGT-----PMPNGEQNFRLNWASFG----AGEKRDDTPDHTIFVGDLAADVTDYMLQ 191
NG PM G R + G A D + T+FVG L +V++ L+
Sbjct: 204 TEMNGVYCSTRPMRIGPATPRKTSGTSGPTGSAARSDGDLTNTTVFVGGLDPNVSEDDLR 263
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
+TF ++Y K+ + K GFV+F A+ +NG + +R+
Sbjct: 264 QTF-SQYGEISSVKIPVG------KQCGFVQFVQRKNAEDALQGLNGSTIGKQTVRLSWG 316
Query: 252 TN 253
N
Sbjct: 317 RN 318
>gi|413919586|gb|AFW59518.1| hypothetical protein ZEAMMB73_768040 [Zea mays]
Length = 329
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 171/248 (68%), Positives = 203/248 (81%), Gaps = 6/248 (2%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMD+ Y+ CF++TGEV VK+IR+K +GQ++GYGF+EF SRA AERV
Sbjct: 84 EVRTLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERV 143
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQT+NG MPN + FRLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFR YP
Sbjct: 144 LQTYNGQMMPNVDLTFRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYP 201
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S KGAKVV D+LT RTKGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA ++K
Sbjct: 202 SVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNAGG 261
Query: 260 SYQ----NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGF 315
Q NSQ AQS++DPNNTT+FVG LD VT++ L++ FS YG+++HVKIP GKRCGF
Sbjct: 262 VVQERVPNSQGAQSENDPNNTTIFVGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGKRCGF 321
Query: 316 VQFADRSC 323
VQF R C
Sbjct: 322 VQFVTRRC 329
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 21/188 (11%)
Query: 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
T+++GDL + D + F + + K++ D+ +G+ +GYGFV F + R +
Sbjct: 86 RTLWIGDLQYWMDDNYVFGCF-SNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERVL 144
Query: 234 TEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
NG ++ P + ++ + + DD + T+FVG+L + VTD L+
Sbjct: 145 QTYNG--------QMMPNVD---LTFRLNWASAGEKRDDTPDYTIFVGDLAADVTDYLLQ 193
Query: 294 ELFS-QYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 346
E F Y + K+ K GFV+F D + A+ +NG + +R+ G
Sbjct: 194 ETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRI--G 251
Query: 347 RSPSNKQA 354
+ S K A
Sbjct: 252 PAASRKNA 259
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 277 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRM 330
T+++G+L + D ++ FS G++ +VK+ K G FV+F R+ AE L+
Sbjct: 87 TLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERVLQT 146
Query: 331 LNGTQLGGQNI--RLSWGRSPSNKQAQPD 357
NG + ++ RL+W + + PD
Sbjct: 147 YNGQMMPNVDLTFRLNWASAGEKRDDTPD 175
>gi|297846966|ref|XP_002891364.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
gi|297337206|gb|EFH67623.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
Length = 443
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 191/360 (53%), Positives = 236/360 (65%), Gaps = 27/360 (7%)
Query: 30 QQQPPPQPSPYMMMMPPQPQAQPPAM---------------WATQAAAPQAAGVAVPPQQ 74
Q + P P P+ M PP P PP M + + Q+ G Q
Sbjct: 42 QPKTSPTPPPHWMRYPP-PVLMPPQMMYAPPPPHPFSPYHQYPSHHLHHQSRGNNNNKHQ 100
Query: 75 QGQPGEIRTLWIGDLQYWMDETYLNTCFAHTG---EVVAVKVIRNKQTGQIEGYGFIEFI 131
GE +T+W+GDL +WMDETYLN+ FA ++V+VKVIRNK G EGYGF+EF
Sbjct: 101 NASNGENKTIWVGDLHHWMDETYLNSSFASADGEIQIVSVKVIRNKHNGLSEGYGFVEFD 160
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYM 189
S A++VLQ FNGT MP+ EQ FRLNWASF GEKR ++ PD +IFVGDLA DV+D +
Sbjct: 161 SHDVADKVLQEFNGTTMPDTEQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDTL 220
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
L ETF +YPS K AKVVID TGR+KGYGFVRFGDE+E+ +AMTEMNGV CS+R MRIG
Sbjct: 221 LHETFSEKYPSVKAAKVVIDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIG 280
Query: 250 PATNKKTVSASYQ-----NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 304
PAT +KT Q N + + + D NTT+FVG LDS VTD+ LR+ FS++G++V
Sbjct: 281 PATPRKTTGYQQQGGYMPNGALTRPEGDTLNTTIFVGGLDSSVTDDDLRQPFSEFGEIVS 340
Query: 305 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD-PNQWNA 363
VKIP GK CGFVQF +R AEEAL LNGT +G Q +RLSWGR+ +NKQ + NQW A
Sbjct: 341 VKIPVGKGCGFVQFVNRPSAEEALEKLNGTVIGKQTVRLSWGRNQANKQPRDKYGNQWVA 400
>gi|15594035|emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]
Length = 456
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 190/338 (56%), Positives = 235/338 (69%), Gaps = 20/338 (5%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+W+GDL WMDE YL CFA T EV ++KVIRNKQTG EGYGF+EF + A AE+VLQ
Sbjct: 117 RTIWVGDLLNWMDEDYLRNCFASTNEVASIKVIRNKQTGFSEGYGFVEFFTHAAAEKVLQ 176
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
T++ MPN +Q FRLNWA+F G+KR ++ D +IFVGDLAADVTD +L ETF +YPS
Sbjct: 177 TYSCMTMPNVDQPFRLNWATFSMGDKRANNGSDLSIFVGDLAADVTDTLLHETFATKYPS 236
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS-- 258
K AKVV D TGR+KGYGFVRFGD++E+ +AMTEMNGV+CS+RPMRIG AT +K+
Sbjct: 237 VKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQ 296
Query: 259 ------ASYQN---SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 309
Y N +Q +Q D D NTT+FVG LD V+DE LR+ F QYG++V VKIP
Sbjct: 297 QQYSSQGGYSNGGPAQGSQPDADSTNTTIFVGGLDPNVSDEDLRQPFVQYGEIVSVKIPV 356
Query: 310 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD-PNQWNAGYYGY 368
+R QFA+R+ AEEAL+ LNGT +G Q +RL WGR+P+NKQ++ D NQW YYG
Sbjct: 357 EERVWVWQFANRNDAEEALQKLNGTFIGKQTVRLFWGRNPANKQSRGDFGNQWTGPYYG- 415
Query: 369 AQGYENYGYAAAAPQDPSM------YYGGYPGYGNYQQ 400
Y+ YGYA DP M YG YP YG +QQ
Sbjct: 416 GHFYDGYGYAFPPQHDPGMYAAAAAAYGAYPIYGTHQQ 453
>gi|147856810|emb|CAN81343.1| hypothetical protein VITISV_008697 [Vitis vinifera]
Length = 536
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 186/311 (59%), Positives = 223/311 (71%), Gaps = 24/311 (7%)
Query: 111 VKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDD 170
+KVIRNKQTG EGYGF+EF S A AE+VLQ + G MPN +Q FRLNWA+F G+KR D
Sbjct: 1 MKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQGYAGVLMPNTDQPFRLNWATFSMGDKRSD 60
Query: 171 T-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
PD +IFVGDLA+DV+D +L ETF +YPS K AKVV D TGR+KGYGFVRFGDE+E+
Sbjct: 61 NGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENER 120
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ-----------NSQVAQSDDDPNNTTV 278
+AMTEMNGV+CS+RPMRIG AT +K S+ YQ N QSD D NTT+
Sbjct: 121 SQAMTEMNGVYCSSRPMRIGAATPRK--SSGYQQQYSSHGGYASNGASVQSDGDSMNTTI 178
Query: 279 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 338
FVG LD V+DE LR+ FSQYG++V VKIP GK CGFVQFA+R+ AE+AL+ LNGT +G
Sbjct: 179 FVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGK 238
Query: 339 QNIRLSWGRSPSNKQAQPD------PNQWNAGYYGYAQGYENYGYAAAAPQDPSMY---Y 389
Q +RLSWGR+P+NKQA NQW+ YYG Q Y+ YGYA P DP+MY Y
Sbjct: 239 QTVRLSWGRNPANKQANSLFMRADFGNQWSGAYYG-GQVYDGYGYALPPPHDPTMYAAAY 297
Query: 390 GGYPGYGNYQQ 400
G YP YGN+QQ
Sbjct: 298 GAYPVYGNHQQ 308
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 26/190 (13%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTG-EVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
++++GDL + ++ L+ FA V A KV+ + TG+ +GYGF+ F + +
Sbjct: 66 SIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMT 125
Query: 142 TFNGT-----PMPNGEQNFRLN------------WASFGAGEKRD-DTPDHTIFVGDLAA 183
NG PM G R + +AS GA + D D+ + TIFVG L
Sbjct: 126 EMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGASVQSDGDSMNTTIFVGGLDP 185
Query: 184 DVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST 243
+V+D L++ F ++Y K+ + KG GFV+F + + A+ ++NG
Sbjct: 186 NVSDEDLRQPF-SQYGEIVSVKIPVG------KGCGFVQFANRNNAEDALQKLNGTVIGK 238
Query: 244 RPMRIGPATN 253
+ +R+ N
Sbjct: 239 QTVRLSWGRN 248
>gi|242062048|ref|XP_002452313.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
gi|241932144|gb|EES05289.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
Length = 435
Score = 354 bits (909), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 175/312 (56%), Positives = 227/312 (72%), Gaps = 9/312 (2%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+W+GDLQYWMDE YL++CF +GEVV +KVIRN+ +G EGYGF+EF S AE+ LQ
Sbjct: 109 RTIWVGDLQYWMDENYLHSCFGPSGEVVNIKVIRNRHSGVSEGYGFVEFYSHVSAEKALQ 168
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDD-TPDHTIFVGDLAADVTDYMLQETFRARYPS 200
F+G MPN ++ F+LNWAS+ GEKR + + DH+IFVGDLA DVTD ML E F +Y S
Sbjct: 169 NFSGHVMPNTDRAFKLNWASYSMGEKRTELSSDHSIFVGDLAVDVTDEMLLELFSNKYRS 228
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
KGAKV+ID TGR++GYGFVRFGD++++ AMTEMNGV+CSTRP+R+GPAT +++ S
Sbjct: 229 VKGAKVIIDANTGRSRGYGFVRFGDDNDKTHAMTEMNGVYCSTRPIRVGPATPRRSQGDS 288
Query: 261 YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFAD 320
+S QSD D N TV+VG LD V+++ LR+ F++YG L VKIP GK+CGFVQF +
Sbjct: 289 -GSSPPRQSDVDSTNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFGKQCGFVQFVN 347
Query: 321 RSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAG-----YYGYAQGYENY 375
R+ AEEAL+ LNG +G Q +RLSWGRSP++KQ++ D G YYG Y Y
Sbjct: 348 RADAEEALQGLNGATIGKQAVRLSWGRSPASKQSRGDSGHRRNGNGNGMYYG-TPFYSGY 406
Query: 376 GYAAAAPQDPSM 387
GYA+ P P+M
Sbjct: 407 GYASPVPH-PNM 417
>gi|413922759|gb|AFW62691.1| hypothetical protein ZEAMMB73_026342 [Zea mays]
Length = 430
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 187/362 (51%), Positives = 241/362 (66%), Gaps = 14/362 (3%)
Query: 33 PPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEI-RTLWIGDLQY 91
P P P M+ PP P Q + P + P G GE RT+W+GDLQY
Sbjct: 58 PYPPPHHPMVAAPPPPSLQ----FVKHFTPPSSVTPPPPTGSGGNGGEDNRTIWVGDLQY 113
Query: 92 WMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNG 151
WMDE YL++CF +GEVV +KVIRN+ +G EGYGFIEF + AE+ LQ F+G MPN
Sbjct: 114 WMDENYLHSCFGSSGEVVNIKVIRNRHSGVSEGYGFIEFYTHVSAEKALQNFSGHVMPNT 173
Query: 152 EQNFRLNWASFGAGEKRDD-TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDR 210
++ F+LNWAS+ GEKR + + DH+IFVGDLA DVTD ML E F +Y S KGAKV+ID
Sbjct: 174 DRAFKLNWASYSMGEKRSEISSDHSIFVGDLAVDVTDAMLLELFSNKYRSVKGAKVIIDA 233
Query: 211 LTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSD 270
TGR++GYGFVRFGD+++++ AMTEMNGV+CSTRP+R+GPAT +++ S S QS
Sbjct: 234 NTGRSRGYGFVRFGDDNDKIHAMTEMNGVYCSTRPIRVGPATPRRSQGDS-GTSPPRQSH 292
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRM 330
D N TV+VG LD V+++ LR+ F++YG L VKIP GK+CGFVQF +R AEEAL
Sbjct: 293 VDSTNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFGKQCGFVQFVNRVDAEEALHG 352
Query: 331 LNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ-----WNAGYYGYAQGYENYGYAAAAPQDP 385
LNG+ +G Q +RLSWGRSP++KQ++ D N YYG Y YGYA+ P P
Sbjct: 353 LNGSTIGKQAVRLSWGRSPASKQSRGDSGHRRNGNCNGMYYG-TPFYGGYGYASPIPH-P 410
Query: 386 SM 387
+M
Sbjct: 411 NM 412
>gi|212275334|ref|NP_001130489.1| uncharacterized protein LOC100191587 [Zea mays]
gi|194689276|gb|ACF78722.1| unknown [Zea mays]
Length = 417
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 174/302 (57%), Positives = 221/302 (73%), Gaps = 6/302 (1%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+W+GDLQYWMDE YL++CF GEVV +KVIRN+ +G EGYGF+EF S AE+ LQ
Sbjct: 93 RTIWVGDLQYWMDENYLHSCFGPGGEVVNIKVIRNRHSGVSEGYGFVEFYSHVSAEKALQ 152
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPS 200
F+G MPN E+ F+LNWAS+ GEKR + PDH+IFVGDLA DVTD ML E F +Y S
Sbjct: 153 NFSGHVMPNTERAFKLNWASYSMGEKRSEVPPDHSIFVGDLAVDVTDEMLLELFSNKYRS 212
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
KGAKV+ID TGR++GYGFVRFGD++++ AMTEMNGV+CSTRP+R+G AT +++ S
Sbjct: 213 VKGAKVIIDANTGRSRGYGFVRFGDDNDKTLAMTEMNGVYCSTRPIRVGLATPRRSQGDS 272
Query: 261 YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFAD 320
+S QSD D N TV+VG LD V+++ LR+ F++YG L VKIP GK+CGFVQF +
Sbjct: 273 -GSSPPRQSDVDSTNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFGKQCGFVQFVN 331
Query: 321 RSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAG---YYGYAQGYENYGY 377
R AEEAL+ LNG+ +G Q IRLSWGRSP++KQ++ D G YYG Y YGY
Sbjct: 332 RVDAEEALQGLNGSTIGKQAIRLSWGRSPTSKQSRGDYGHRRNGNGMYYG-TPFYGGYGY 390
Query: 378 AA 379
A+
Sbjct: 391 AS 392
>gi|302794528|ref|XP_002979028.1| hypothetical protein SELMODRAFT_418663 [Selaginella moellendorffii]
gi|302806386|ref|XP_002984943.1| hypothetical protein SELMODRAFT_424039 [Selaginella moellendorffii]
gi|300147529|gb|EFJ14193.1| hypothetical protein SELMODRAFT_424039 [Selaginella moellendorffii]
gi|300153346|gb|EFJ19985.1| hypothetical protein SELMODRAFT_418663 [Selaginella moellendorffii]
Length = 408
Score = 347 bits (889), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 176/288 (61%), Positives = 220/288 (76%), Gaps = 13/288 (4%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P +++TLW+GDLQYWMDE+YLN+ F+ TGE+V+ K+IRNK +G EGYGF+EF S A AE
Sbjct: 16 PIDMKTLWVGDLQYWMDESYLNSIFSSTGELVSAKIIRNKASGFPEGYGFVEFASHACAE 75
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRA 196
RVL F GT MP EQ FRLNWA FG GE+R + P+++IFVGDLA DVTDYMLQETFR
Sbjct: 76 RVLTAFTGTQMPQTEQLFRLNWAYFGIGERRPEGGPENSIFVGDLAPDVTDYMLQETFRT 135
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
RYPS +GAKVV D TGR+KGYGFVRF D+SE++RAM+EMNG++CS+RPMRI AT KK
Sbjct: 136 RYPSVRGAKVVTDVATGRSKGYGFVRFADDSERVRAMSEMNGIYCSSRPMRINAATPKKA 195
Query: 257 V---------SASYQNS--QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 305
+ ++ S Q +D+DPNNTT+FVG LD V++E L++ F ++G+LV+V
Sbjct: 196 LIPSAPAPQKVTTFATSPLQNVPNDNDPNNTTIFVGGLDPAVSEEELQKTFGEFGELVYV 255
Query: 306 KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
KIP GK CGFVQF RSCAEEAL L+GT + Q IRLSWGR+ +NKQ
Sbjct: 256 KIPPGKGCGFVQFTHRSCAEEALGKLHGTMIRQQAIRLSWGRT-ANKQ 302
>gi|297602825|ref|NP_001052934.2| Os04g0449900 [Oryza sativa Japonica Group]
gi|255675510|dbj|BAF14848.2| Os04g0449900 [Oryza sativa Japonica Group]
Length = 387
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 176/330 (53%), Positives = 227/330 (68%), Gaps = 25/330 (7%)
Query: 70 VPPQQQGQPG----EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGY 125
PP G G E +T+W+GDLQYWMDE YL++CF +GEVV +KVIRN+QTGQ EGY
Sbjct: 49 TPPAPAGSGGNGCEENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGY 108
Query: 126 GFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAAD 184
GF+EF S AE+ LQ F G MPN ++ F+LNWAS+ GEKR + D++IFVGDLAAD
Sbjct: 109 GFVEFYSHGSAEKALQNFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAAD 168
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
VTD ML E F +Y S KGAKV+ID TGR++GYGFVRFGD++++ AMTEMNG +CSTR
Sbjct: 169 VTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTR 228
Query: 245 PMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 304
P+RIGPAT +++ S ++ SD D N TV+VG LD V+++ LR+ F++YG +
Sbjct: 229 PIRIGPATPRRSSGDSGSSTP-GHSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVAS 287
Query: 305 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNA 363
VKIP GK+CGFVQF R+ AEEAL+ LNG+ +G Q +RLSWGRSPS+KQ++ D ++ N
Sbjct: 288 VKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQAVRLSWGRSPSHKQSRADSGSRRNN 347
Query: 364 GYYG------------------YAQGYENY 375
YYG YA Y Y
Sbjct: 348 MYYGTPFYGGYGYASPVPHPNMYAAAYGAY 377
>gi|302813198|ref|XP_002988285.1| hypothetical protein SELMODRAFT_447249 [Selaginella moellendorffii]
gi|300144017|gb|EFJ10704.1| hypothetical protein SELMODRAFT_447249 [Selaginella moellendorffii]
Length = 352
Score = 343 bits (881), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 182/340 (53%), Positives = 229/340 (67%), Gaps = 29/340 (8%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
++R+LWIGDLQYWMDE+YL +CF + +V+ KVIRNK TG EGYGF+EF S A AE+
Sbjct: 15 DVRSLWIGDLQYWMDESYLKSCFPQS-TIVSTKVIRNKITGHHEGYGFVEFESHAAAEKA 73
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQ+F G MP EQ FRLNWA G G+KRD D +IFVGDLAADVTD ML ETF++RYP
Sbjct: 74 LQSFTGAVMPRTEQAFRLNWACVG-GDKRDSGADDSIFVGDLAADVTDAMLLETFKSRYP 132
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV-- 257
S K AKVV+D +GR +GYGFVRFGDE+E+ AMTEM+GV+CS+RPMRI AT KK
Sbjct: 133 SVKSAKVVMDVNSGRCRGYGFVRFGDEAEKSSAMTEMHGVYCSSRPMRIRTATPKKQTQQ 192
Query: 258 ----SASYQ-----NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP 308
SYQ +DD NTT+FVG LD V+ + L+++FS YG++ + KIP
Sbjct: 193 HPVQRVSYQLVPAYAMPAPAGEDDFTNTTIFVGGLDQNVSLDDLKDVFSPYGEIKYTKIP 252
Query: 309 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ----------PDP 358
G+ CGFVQF R+ AEEAL+ ++G+ +G Q +RLSWGR P+NKQ P
Sbjct: 253 PGRGCGFVQFMTRASAEEALKQVHGSVIGQQTVRLSWGRHPANKQRLSSSALPWYQPPFD 312
Query: 359 NQWNAGY-YGYAQGYENYGYAAAAPQDPSMYY-GGYPGYG 396
+QWNA Y Y ++Q YA PQDP++ Y GY YG
Sbjct: 313 SQWNAFYPYNHSQA----PYAYLYPQDPALVYTTGYQVYG 348
>gi|356557398|ref|XP_003547003.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 404
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 179/325 (55%), Positives = 224/325 (68%), Gaps = 34/325 (10%)
Query: 89 LQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPM 148
L+ +DE YL+ CFA GEVV++K+IRN+ TGQ EGYGF+EF+S A AERVLQT+N T
Sbjct: 11 LRTAVDEAYLSHCFAPAGEVVSIKIIRNELTGQPEGYGFVEFVSHATAERVLQTYNAT-- 68
Query: 149 PNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVV 207
+Q FRLNWASFG GE+R D +H+IFVGDLA D+TDY+LQE FRA YPS +GAKVV
Sbjct: 69 ---DQTFRLNWASFGIGERRPDAALEHSIFVGDLAPDITDYLLQEMFRAHYPSVRGAKVV 125
Query: 208 IDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNS--- 264
D TGR+KGYGFV+F DE+E+ RAMTEMNGV+CSTRPMRI AT KKT SA +
Sbjct: 126 SDPNTGRSKGYGFVKFSDENERNRAMTEMNGVYCSTRPMRISAATPKKTTSAYAAPAAPV 185
Query: 265 ---------------QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 309
QV + D NNT +FVGNLD V++E L++ F Q+G++V VK+ +
Sbjct: 186 PKPVYPVPAYTAPVVQVQPPEYDVNNTAIFVGNLDLNVSEEELKQNFLQFGEIVSVKVQS 245
Query: 310 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP-------DPNQWN 362
GK CGFVQF R+ AEEA++ + +G Q +R+SWGR+ + +Q P DPNQW+
Sbjct: 246 GKGCGFVQFGTRASAEEAIQKMQEKMIGQQVVRISWGRTLTARQDLPGGWGPQMDPNQWS 305
Query: 363 AGYYGYAQGYENYGYAAAAPQDPSM 387
A YYGY QGYE Y Y AA DPS
Sbjct: 306 A-YYGYGQGYEAYAYGAA--HDPSF 327
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++G+L + E L F GE+V+VKV Q+G+ G GF++F +RA AE +Q
Sbjct: 214 IFVGNLDLNVSEEELKQNFLQFGEIVSVKV----QSGK--GCGFVQFGTRASAEEAIQKM 267
Query: 144 NGTPMPNGEQNFRLNW 159
+ G+Q R++W
Sbjct: 268 QEKMI--GQQVVRISW 281
>gi|302760919|ref|XP_002963882.1| hypothetical protein SELMODRAFT_80061 [Selaginella moellendorffii]
gi|300169150|gb|EFJ35753.1| hypothetical protein SELMODRAFT_80061 [Selaginella moellendorffii]
Length = 332
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 163/286 (56%), Positives = 205/286 (71%), Gaps = 13/286 (4%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
++R+LWIGDLQYWMDE+YL +CF + +V+ KVIRNK TG EGYGF+EF S A AE+
Sbjct: 15 DVRSLWIGDLQYWMDESYLKSCFPQS-TIVSTKVIRNKITGHHEGYGFVEFESHAAAEKA 73
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
LQ+F G MP EQ FRLNWA G G+KRD D +IFVGDLAADVTD ML ETF++RYP
Sbjct: 74 LQSFTGAVMPRTEQAFRLNWACVG-GDKRDSGADDSIFVGDLAADVTDAMLLETFKSRYP 132
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV-- 257
S K AKVV+D +GR +GYGFVRFGDE+E+ AMTEM+GV+CS+RPMRI AT KK
Sbjct: 133 SVKSAKVVMDVNSGRCRGYGFVRFGDETEKSSAMTEMHGVYCSSRPMRIRTATPKKQTQQ 192
Query: 258 ----SASYQ-----NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP 308
SYQ +DD NTT+FVG LD V+ + L+++FS YG++ + KIP
Sbjct: 193 HPVQRVSYQLVPAYAMPAPAGEDDFTNTTIFVGGLDQNVSLDDLKDVFSPYGEIKYTKIP 252
Query: 309 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 354
G+ CGFVQF R+ AEEAL+ ++G+ +G Q +RLSWGR P+NKQ
Sbjct: 253 PGRGCGFVQFMTRASAEEALKQVHGSVIGQQTVRLSWGRHPANKQV 298
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 33/208 (15%)
Query: 165 GEKRDDTPDHTIFVGDLAADVTDYMLQETF-RARYPSTK--GAKVVIDRLTGRTKGYGFV 221
+ RDD ++++GDL Y + E++ ++ +P + KV+ +++TG +GYGFV
Sbjct: 10 AQARDDV--RSLWIGDL-----QYWMDESYLKSCFPQSTIVSTKVIRNKITGHHEGYGFV 62
Query: 222 RFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSD--DDPNNTTVF 279
F + +A+ G A +T A N D D + ++F
Sbjct: 63 EFESHAAAEKALQSFTG------------AVMPRTEQAFRLNWACVGGDKRDSGADDSIF 110
Query: 280 VGNLDSIVTDEHLRELF-SQYGQLVHVKIPA---GKRC---GFVQFADRSCAEEALRMLN 332
VG+L + VTD L E F S+Y + K+ RC GFV+F D + A+ ++
Sbjct: 111 VGDLAADVTDAMLLETFKSRYPSVKSAKVVMDVNSGRCRGYGFVRFGDETEKSSAMTEMH 170
Query: 333 GTQLGGQNIRLSWGRSPSNKQAQPDPNQ 360
G + +R+ + KQ Q P Q
Sbjct: 171 GVYCSSRPMRIR--TATPKKQTQQHPVQ 196
>gi|297834824|ref|XP_002885294.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
gi|297331134|gb|EFH61553.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
Length = 435
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 171/332 (51%), Positives = 212/332 (63%), Gaps = 57/332 (17%)
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
P +G +++TLW+GDL +WMDETYL++CF+HTGEV +VKVIRNK T Q EGYGFIEF+
Sbjct: 98 PLDRGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFIEFL 157
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-------------------- 171
SRA AE VLQ ++G+ MP D
Sbjct: 158 SRAAAEEVLQNYSGSLMP------------------NSDQPFRINWASFSTGEKRAVENG 199
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
PD +IFVGDL+ DVTD +L ETF RYPS K AKVVID TGR+KGYGFVRFGDE+E+ R
Sbjct: 200 PDLSIFVGDLSPDVTDALLHETFFDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSR 259
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVA-----------------QSDDDPN 274
A+TEMNG +CS R MR+G AT K+ ++ Q+S A QSD +
Sbjct: 260 ALTEMNGAYCSNRQMRVGVATPKRAIANQQQHSSQALILAGGHGANGSMAHGSQSDGEST 319
Query: 275 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGT 334
N T+FVG +D+ VTDE LR+ FSQ+G++V VKIP GK CGFVQFA+R AE+A+ LNGT
Sbjct: 320 NATIFVGGIDADVTDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFAERKSAEDAIETLNGT 379
Query: 335 QLGGQNIRLSWGRSPSNKQAQPDPN-QWNAGY 365
+G +RLSWGRSP NKQ + D QWN GY
Sbjct: 380 VIGKNTVRLSWGRSP-NKQWRGDSGQQWNGGY 410
>gi|218191015|gb|EEC73442.1| hypothetical protein OsI_07730 [Oryza sativa Indica Group]
Length = 312
Score = 327 bits (837), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 163/296 (55%), Positives = 209/296 (70%), Gaps = 3/296 (1%)
Query: 93 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE 152
MDE YL+ CF +GEVV +KVIRN+ +G EGYGF+EF S A AE+ LQ F+G MPN +
Sbjct: 1 MDEGYLHNCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFFSHASAEKALQNFSGHVMPNTD 60
Query: 153 QNFRLNWASFGAGEKRDD-TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRL 211
+ F+LNWAS+ GEKR + DH+IFVGDLA DVTD ML + F +Y S KGAKV+ID
Sbjct: 61 RAFKLNWASYSMGEKRSELASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDAN 120
Query: 212 TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDD 271
TGR++GYGFVRFGD++++ AMTEMNG +CSTRP+RIGPAT + S +S QSD
Sbjct: 121 TGRSRGYGFVRFGDDNDKTHAMTEMNGAYCSTRPIRIGPAT-PRRSSGDSGSSPPRQSDS 179
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
D N T++VG LD T++ LR+ F++YG L VKIP GK+CGFVQF +R AEEAL+ L
Sbjct: 180 DSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPDAEEALQGL 239
Query: 332 NGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSM 387
NG+ +G Q +RLSWGRSP++KQ++ D G Y Y YGYA+ P P+M
Sbjct: 240 NGSTIGKQAVRLSWGRSPASKQSRGDSGHRRNGMYYGTPFYGGYGYASPLPH-PNM 294
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+++G L E L FA G++ +VK+ KQ GF++F++R AE LQ
Sbjct: 184 RTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQC------GFVQFVNRPDAEEALQ 237
Query: 142 TFNGTPMPNGEQNFRLNWA 160
NG+ + G+Q RL+W
Sbjct: 238 GLNGSTI--GKQAVRLSWG 254
>gi|297791731|ref|XP_002863750.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
gi|297309585|gb|EFH40009.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
Length = 400
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 179/330 (54%), Positives = 217/330 (65%), Gaps = 27/330 (8%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E +T+W+GDL +WMDE YLN+ F+ GE+ +VKVIRNK TG EGYGF+EF+S AE+V
Sbjct: 89 ENKTIWVGDLLHWMDENYLNSSFSSAGEISSVKVIRNKHTGLTEGYGFVEFVSHDVAEKV 148
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARY 198
LQ NG M N EQ FRLNWASF GEKR ++ PD +IFVGDLA +VTD ML++ F +Y
Sbjct: 149 LQELNGEAMLNAEQPFRLNWASFSTGEKRLENGPDLSIFVGDLAPEVTDTMLEQIFSEKY 208
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS K AKVVID TGR+KGYGFVRFGD+SE+ +AM EMNGV C R MRIGPAT +K
Sbjct: 209 PSVKNAKVVIDGNTGRSKGYGFVRFGDDSERSKAMLEMNGVKCCGRAMRIGPATPRKPSG 268
Query: 259 ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQF 318
Q LDS VTD+ LR+ F+ YG++V VKIP GK CGF+QF
Sbjct: 269 YHQQ-------------------GLDSSVTDDDLRQPFAGYGEIVSVKIPVGKGCGFIQF 309
Query: 319 ADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD-PNQWNAGYYGYAQGYENYGY 377
+R AEEAL LNG+ +G Q +RLSWGR+P NKQ + + +QW Y Q Y YGY
Sbjct: 310 VNRENAEEALEKLNGSMIGKQTVRLSWGRNPGNKQPRGEYADQW-VEPYYGGQYYNGYGY 368
Query: 378 AAAAPQDPSMYY-----GGYPGYGNYQQPQ 402
P DP MY GGYP Y +QQ Q
Sbjct: 369 MMPPPVDPRMYAAAPYGGGYPVYSGHQQQQ 398
>gi|147781769|emb|CAN74486.1| hypothetical protein VITISV_029928 [Vitis vinifera]
Length = 434
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 173/332 (52%), Positives = 216/332 (65%), Gaps = 46/332 (13%)
Query: 75 QGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ-TGQIEGYGF-IE--- 129
G EI+TLW+GDL WMD+ YL TCF HTGE + V IR+ ++ +GF IE
Sbjct: 71 HGSTDEIKTLWVGDLHQWMDDNYLRTCFGHTGEWLFVMCIRHIYFINRLLVFGFSIEVLY 130
Query: 130 ------------------FISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT 171
F E ++NGT MPN EQ FRLNWA+F G++R D
Sbjct: 131 IVKSFKIYEWIWLWAGDVFHELGILENFXHSYNGTLMPNTEQPFRLNWATFSTGDRRTDA 190
Query: 172 -PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
D +IFVGDLA+DVTD +LQETF RYPS KGAKVV D TGR+KGYGFVRFGDE+E+
Sbjct: 191 GSDLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERS 250
Query: 231 RAMTEMNGVFCSTRPMRIGPATNKKTVSASYQN-------------------SQVAQSDD 271
RAM EMNG++CS+RPMRIG AT KK ++ YQ +Q +Q++
Sbjct: 251 RAMNEMNGIYCSSRPMRIGVATPKK--ASGYQQQYSSQALVLAGGNASNGAVAQGSQANG 308
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
D NTT+FVG LDS VTDE LR+ FSQ+G++V VKIP GK CGFVQFA+R+ AE+AL+ L
Sbjct: 309 DSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDALQRL 368
Query: 332 NGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWN 362
NGT +G Q +RLSWGR+P++KQ + D NQWN
Sbjct: 369 NGTVIGKQTVRLSWGRNPASKQWRNDSNNQWN 400
>gi|255555523|ref|XP_002518798.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542179|gb|EEF43723.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 438
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/325 (53%), Positives = 210/325 (64%), Gaps = 70/325 (21%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+T+W+GDL +WMDETYL++CF+HTGEV +VKVIRNKQTGQ EGYGFIEF S A AE+VLQ
Sbjct: 106 KTIWVGDLLHWMDETYLHSCFSHTGEVTSVKVIRNKQTGQPEGYGFIEFYSHATAEKVLQ 165
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPS 200
+NG+ MPN +Q FRLNWASF AGE+R +T D +IFVGDLAADVTD MLQETF ++Y S
Sbjct: 166 NYNGSMMPNADQPFRLNWASF-AGERRTETGSDLSIFVGDLAADVTDAMLQETFSSKYLS 224
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV--- 257
KGAKVV D TGR+KGYGFVRFGDE +
Sbjct: 225 VKGAKVVTDLNTGRSKGYGFVRFGDE-------------------------NERSRAMME 259
Query: 258 --------------------SASYQN-------------------SQVAQSDDDPNNTTV 278
S +YQ +Q +QSD D NNTT+
Sbjct: 260 MNGVYCSSRPMRIGVATPKKSPAYQQQYSSQALVLAGGHAPNGSMAQGSQSDGDSNNTTI 319
Query: 279 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 338
FVG +DS ++DE LR+ FSQ+G++V VKIPAGK CGFVQFADR AE+AL+ LNGT +G
Sbjct: 320 FVGGIDSDISDEDLRQPFSQFGEVVSVKIPAGKGCGFVQFADRKSAEDALQSLNGTTIGK 379
Query: 339 QNIRLSWGRSPSNKQAQPDP-NQWN 362
Q +RLSWGRSP+NKQ + D NQWN
Sbjct: 380 QTVRLSWGRSPANKQWRGDHNNQWN 404
>gi|227204263|dbj|BAH56983.1| AT1G11650 [Arabidopsis thaliana]
Length = 271
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 180/282 (63%), Positives = 200/282 (70%), Gaps = 30/282 (10%)
Query: 1 MMQPAPGAVPP--PPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWAT 58
M QP PG + P PPP A QY YQQ PP PP MW
Sbjct: 2 MQQPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPP----------------PPQMWNP 45
Query: 59 QAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ 118
QAAAP P Q EIRTLWIGDLQYWMDE +L CFAHTGE+V+ KVIRNKQ
Sbjct: 46 QAAAP-------PSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQ 98
Query: 119 TGQIEGYGFIEFISRAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTPDHTIF 177
TGQ+EGYGFIEF S A AERVLQTFN P+P+ +Q FRLNWAS +G+KRDD+PD+TIF
Sbjct: 99 TGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDSPDYTIF 158
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDLAADVTDY+L ETFRA YPS KGAKVVIDR+TGRTKGYGFVRF DESEQ+RAMTEMN
Sbjct: 159 VGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMN 218
Query: 238 GVFCSTRPMRIGPATNKKTVSA---SYQNSQV-AQSDDDPNN 275
GV CSTRPMRIGPA +KK V+ SYQ+S +D+DPNN
Sbjct: 219 GVPCSTRPMRIGPAASKKGVTGQRDSYQSSAAGVTTDNDPNN 260
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 16/198 (8%)
Query: 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
T+++GDL + + L F A AKV+ ++ TG+ +GYGF+ F + R +
Sbjct: 62 RTLWIGDLQYWMDENFLYGCF-AHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVL 120
Query: 234 TEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
N P+ P+ + ++ + DD + T+FVG+L + VTD L
Sbjct: 121 QTFNNA-----PI---PSFPDQLFRLNWASLSSGDKRDDSPDYTIFVGDLAADVTDYILL 172
Query: 294 ELF-----SQYGQLVHVKIPAG--KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 346
E F S G V + G K GFV+F+D S A+ +NG + +R+
Sbjct: 173 ETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPA 232
Query: 347 RSPSNKQAQPDPNQWNAG 364
S Q D Q +A
Sbjct: 233 ASKKGVTGQRDSYQSSAA 250
>gi|15222783|ref|NP_175383.1| RNA-binding protein 47A [Arabidopsis thaliana]
gi|378522727|sp|F4I3B3.1|RB47A_ARATH RecName: Full=Polyadenylate-binding protein RBP47A;
Short=Poly(A)-binding protein RBP47A; AltName:
Full=RNA-binding protein 47A; Short=AtRBP47A
gi|332194327|gb|AEE32448.1| RNA-binding protein 47A [Arabidopsis thaliana]
Length = 445
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/350 (50%), Positives = 216/350 (61%), Gaps = 73/350 (20%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+++TLW+GDL +WMDETYL+TCF+HT EV +VKVIRNKQT Q EGYGF+EF+SR+ AE
Sbjct: 117 DVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEA 176
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQETFRAR 197
LQ+F+G MPN EQ FRLNWASF GEKR ++ PD +IFVGDLA DV+D +L ETF R
Sbjct: 177 LQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGR 236
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
YPS KGAKVVID TGR+KGYGFVRFGDE+E+ RA
Sbjct: 237 YPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRA------------------------- 271
Query: 258 SASYQNSQV--------------------------------------AQSDDDPNNTTVF 279
+ N + SD + NN+T+F
Sbjct: 272 -MTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSMSDGESNNSTIF 330
Query: 280 VGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQ 339
VG LD+ VT+E L + FS +G++V VKIP GK CGFVQFA+R AEEA+ LNGT +G
Sbjct: 331 VGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKN 390
Query: 340 NIRLSWGRSPSNKQAQPDP-NQWNAGYYGYAQGYENYGYAAAAPQDPSMY 388
+RLSWGRSP NKQ + D NQWN G Y QGY N GY A QD +MY
Sbjct: 391 TVRLSWGRSP-NKQWRSDSGNQWNGG-YSRGQGYNN-GY---ANQDSNMY 434
>gi|357111822|ref|XP_003557709.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 361
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 164/326 (50%), Positives = 220/326 (67%), Gaps = 21/326 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R+L IG L WM+E YL +CF + E+++ V RNK+TG+ E +G++ F A A+++LQ
Sbjct: 51 RSLRIGGLLDWMNEEYLRSCFTRSPELLSAVVKRNKETGKSECFGYLNFADHATADQILQ 110
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
++NG MPN +++FRL+W + +KRDD H I+VGDLA DVTD+ML F++RYPS
Sbjct: 111 SYNGQKMPNADRDFRLSWVTNYPVQKRDDD-GHNIYVGDLAFDVTDFMLHHVFKSRYPSV 169
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
K AK+ D GR+KGYGFV FGD +E+ +AMTEMNG +CSTRPMR+GPAT ++ Y
Sbjct: 170 KHAKIAWDHFNGRSKGYGFVVFGDVNERRQAMTEMNGAYCSTRPMRVGPATK---MAGKY 226
Query: 262 QNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADR 321
SD D NNT +FVG LD IVTDE L++ FS YG+L VK+ AGK+CGFV + +R
Sbjct: 227 -------SDSDSNNTRLFVGGLDRIVTDEDLKKAFSPYGELTEVKVIAGKKCGFVTYLNR 279
Query: 322 SCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAA 381
+ AEEA+R+LNG+ LG IR+SWGRS +KQ D NQWN G GY ++
Sbjct: 280 ASAEEAMRILNGSLLGDNTIRISWGRSLYHKQKH-DQNQWNGERQGSGPGYRSH------ 332
Query: 382 PQDPSMY-YGGYPGYGNYQQPQQPQQ 406
P+DP M+ Y G+P Y +Y PQQ Q
Sbjct: 333 PEDPKMHGYTGHPEYPHY--PQQQAQ 356
>gi|357480265|ref|XP_003610418.1| RNA-binding protein [Medicago truncatula]
gi|355511473|gb|AES92615.1| RNA-binding protein [Medicago truncatula]
Length = 319
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 182/289 (62%), Positives = 200/289 (69%), Gaps = 53/289 (18%)
Query: 39 PYMMM----MPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMD 94
PYMMM PQPQ QPP MWA A PQ + AVPP E++TLWIGDLQYWMD
Sbjct: 31 PYMMMHPPQPQPQPQTQPPQMWAPNAQPPQQS--AVPPPSSAD--EVKTLWIGDLQYWMD 86
Query: 95 ETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQN 154
E YL CF+HTGEV +VKVIRNKQT Q EGYGF+EFISRAGAERVLQTFNGT MPNG QN
Sbjct: 87 ENYLYNCFSHTGEVGSVKVIRNKQTNQSEGYGFLEFISRAGAERVLQTFNGTIMPNGGQN 146
Query: 155 FRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTG 213
FRLNWA+F +GEKR DD+PD+TIFVGDLAADV+D+ L E FR RY S KGAKVVIDR TG
Sbjct: 147 FRLNWATFSSGEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTG 206
Query: 214 RTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK-------KTV--------- 257
RTKGYGFVRF DESEQ+RAMTEM GV CSTRPMRIGPA+NK K V
Sbjct: 207 RTKGYGFVRFADESEQMRAMTEMQGVLCSTRPMRIGPASNKNLGTQTSKAVHFIIYMVLV 266
Query: 258 ---------------------------SASYQNSQ-VAQSDDDPNNTTV 278
+ASYQN Q AQ+++DPNNTTV
Sbjct: 267 YFLSFFYELLPSMSYVIYLFILFYFENAASYQNPQGGAQNENDPNNTTV 315
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 20/178 (11%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GDL + + L F + KV+ ++ T +++GYGF+ F + R +
Sbjct: 75 TLWIGDLQYWMDENYLYNCF-SHTGEVGSVKVIRNKQTNQSEGYGFLEFISRAGAERVLQ 133
Query: 235 EMNGVFCST--RPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 292
NG + R+ AT +S + DD P+ T+FVG+L + V+D HL
Sbjct: 134 TFNGTIMPNGGQNFRLNWAT---------FSSGEKRHDDSPD-YTIFVGDLAADVSDHHL 183
Query: 293 RELF-SQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRMLNGTQLGGQNIRL 343
E+F ++Y + K+ + GFV+FAD S A+ + G + +R+
Sbjct: 184 TEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAMTEMQGVLCSTRPMRI 241
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 277 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRM 330
T+++G+L + + +L FS G++ VK+ K+ GF++F R+ AE L+
Sbjct: 75 TLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQTNQSEGYGFLEFISRAGAERVLQT 134
Query: 331 LNGTQL--GGQNIRLSWGRSPSNKQAQPD 357
NGT + GGQN RL+W S ++ D
Sbjct: 135 FNGTIMPNGGQNFRLNWATFSSGEKRHDD 163
>gi|222628961|gb|EEE61093.1| hypothetical protein OsJ_14988 [Oryza sativa Japonica Group]
Length = 373
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 166/298 (55%), Positives = 215/298 (72%), Gaps = 8/298 (2%)
Query: 107 EVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGE 166
+VV +KVIRN+QTGQ EGYGF+EF S AE+ LQ F G MPN ++ F+LNWAS+ GE
Sbjct: 76 KVVTIKVIRNRQTGQSEGYGFVEFYSHGSAEKALQNFTGHVMPNTDRPFKLNWASYSMGE 135
Query: 167 KRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGD 225
KR + D++IFVGDLAADVTD ML E F +Y S KGAKV+ID TGR++GYGFVRFGD
Sbjct: 136 KRSEVASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGD 195
Query: 226 ESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDS 285
++++ AMTEMNG +CSTRP+RIGPAT +++ S ++ SD D N TV+VG LD
Sbjct: 196 DNDKSHAMTEMNGAYCSTRPIRIGPATPRRSSGDSGSSTP-GHSDGDSTNRTVYVGGLDP 254
Query: 286 IVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 345
V+++ LR+ F++YG + VKIP GK+CGFVQF R+ AEEAL+ LNG+ +G Q +RLSW
Sbjct: 255 NVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQAVRLSW 314
Query: 346 GRSPSNKQAQPDP-NQWNAGYYGYAQGYENYGYAAAAPQDPSMY---YGGYPGYGNYQ 399
GRSPS+KQ++ D ++ N YYG Y YGYA+ P P+MY YG YP YG+ Q
Sbjct: 315 GRSPSHKQSRADSGSRRNNMYYG-TPFYGGYGYASPVPH-PNMYAAAYGAYPVYGSQQ 370
>gi|449488366|ref|XP_004158014.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 260
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 179/265 (67%), Positives = 193/265 (72%), Gaps = 19/265 (7%)
Query: 2 MQPAPGAVPPPPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAA 61
MQPAPG P P A Q Q Q PPQ P M P QPQA P Q
Sbjct: 1 MQPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSP-----QGQ 55
Query: 62 APQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQ 121
PQ+A E+RTLWIGDLQYWMDE Y+ CFAHTGEV +VKVIRNKQTGQ
Sbjct: 56 PPQSA----------NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQ 105
Query: 122 IEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGD 180
EGYGFIEF++R AERVLQT+NGT MPNG QNFRLNWAS AGEKR DD+PD+TIFVGD
Sbjct: 106 SEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWAS--AGEKRQDDSPDYTIFVGD 163
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
LA DVTDY+LQETFRARY S KGAKVVIDRLTGRTKGYGFV+FGDESEQ+RAMTEMNGV
Sbjct: 164 LAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVH 223
Query: 241 CSTRPMRIGPATNKKTVSASYQNSQ 265
CS+RPMRIGPA NK T S S Q S+
Sbjct: 224 CSSRPMRIGPAANKNT-SGSQQFSK 247
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 18/177 (10%)
Query: 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
T+++GDL + + + F A KV+ ++ TG+++GYGF+ F R +
Sbjct: 66 RTLWIGDLQYWMDENYIFNCF-AHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVL 124
Query: 234 TEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
NG M G + +++ + Q DD + T+FVG+L VTD L+
Sbjct: 125 QTYNGT-----AMPNGAQNFRLNWASAGEKRQ-----DDSPDYTIFVGDLAGDVTDYVLQ 174
Query: 294 ELF-SQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRMLNGTQLGGQNIRL 343
E F ++Y + K+ + GFV+F D S A+ +NG + +R+
Sbjct: 175 ETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRI 231
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 268 QSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADR 321
QS + T+++G+L + + ++ F+ G++ VK+ K+ GF++F R
Sbjct: 58 QSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTR 117
Query: 322 SCAEEALRMLNGTQL--GGQNIRLSWGRSPSNKQ 353
AE L+ NGT + G QN RL+W + +Q
Sbjct: 118 PAAERVLQTYNGTAMPNGAQNFRLNWASAGEKRQ 151
>gi|255073999|ref|XP_002500674.1| predicted protein [Micromonas sp. RCC299]
gi|226515937|gb|ACO61932.1| predicted protein [Micromonas sp. RCC299]
Length = 440
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 165/326 (50%), Positives = 206/326 (63%), Gaps = 16/326 (4%)
Query: 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
+ GE++TLW+GDL YWM+E+YL+TCFAH G + +VK+IRNKQTG EGYGF+EF+ RA A
Sbjct: 8 ETGEVKTLWVGDLGYWMEESYLHTCFAHFGAIGSVKIIRNKQTGFSEGYGFVEFVDRATA 67
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----DHTIFVGDLAADVTDYMLQE 192
E L+T NGTPMP+ QNFRLNWASFG G DH++FVGDL +V DY LQE
Sbjct: 68 EHALKTLNGTPMPSAHQNFRLNWASFGVGGGAGGAGGAANDHSVFVGDLPPEVNDYALQE 127
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
TF RYPS + A+VV D TGR+KG+GFVRFGDE E+ RA+ EMNGV C +R MRI A
Sbjct: 128 TFAERYPSVRNARVVTDPNTGRSKGFGFVRFGDEGERDRALVEMNGVPCGSRVMRISLAI 187
Query: 253 NKKTVSASYQNSQVAQSDD-----------DPNNTTVFVGNLDSIVTDEHLRELFSQYGQ 301
+K V + + +P N+TVFVG LD +T+ LR F +G+
Sbjct: 188 PRKGVDGVGGGGVGSNTGVGSNGVGGSPAPEPENSTVFVGGLDPTLTEPDLRTHFEAFGE 247
Query: 302 LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQW 361
LV+VKIPAGK CGFVQF R+ AE +++ LNGT +G +RLSW RS +
Sbjct: 248 LVYVKIPAGKGCGFVQFTRRADAEASIQALNGTMMGASRVRLSWVRSGGGGGGRHTGPFG 307
Query: 362 NAGYYGY-AQGYENYGYAAAAPQDPS 386
YG GY Y A A DPS
Sbjct: 308 GGSPYGMPYGGYPPYAMAGAYGVDPS 333
>gi|223973753|gb|ACN31064.1| unknown [Zea mays]
Length = 359
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 158/326 (48%), Positives = 209/326 (64%), Gaps = 33/326 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R+LWIG L WMDE YL CF + E++++ + RNKQTGQ EG+GF++F A +L+
Sbjct: 37 RSLWIGGLLLWMDEDYLYGCFTTSRELLSLVIKRNKQTGQSEGFGFLKFSDHTAAAHILK 96
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKR--------------------DDTPDHTIFVGDL 181
++NG MPN Q+F+LNWA+ K+ D + DH+IFVGDL
Sbjct: 97 SYNGQKMPNAVQDFKLNWATQQPAPKKLPDPDFKLDLATQQERHAAVDSSSDHSIFVGDL 156
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
A +VT YML F+ARYPS K AK++ D+ TG +K YGFV+FGD EQ++A+TEMNG +C
Sbjct: 157 AYNVTGYMLHHVFKARYPSVKSAKIIFDKFTGLSKCYGFVQFGDVDEQIQALTEMNGAYC 216
Query: 242 STRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQ 301
STRPMRIGP KK S+++ Q +S D NN+ +FVG LD VT E L + FS YG+
Sbjct: 217 STRPMRIGPVPKKKN---SFRSKQWTESYHDANNSRLFVGQLDQSVTSEDLMQAFSPYGE 273
Query: 302 LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ------ 355
LV VK GK CGFV +++R+ AEEA+RMLNG+QLGG+ I+LSWG ++KQAQ
Sbjct: 274 LVDVKALPGKGCGFVTYSNRASAEEAIRMLNGSQLGGKAIKLSWGYPSADKQAQRNSGGG 333
Query: 356 --PDPNQWNAGY-YGYAQGYE-NYGY 377
D W+ Y Y YAQ + YGY
Sbjct: 334 FGRDCFVWSPQYPYAYAQTCQPGYGY 359
>gi|222623094|gb|EEE57226.1| hypothetical protein OsJ_07197 [Oryza sativa Japonica Group]
Length = 459
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 156/304 (51%), Positives = 203/304 (66%), Gaps = 23/304 (7%)
Query: 106 GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAG 165
G+VV +KVIRN+ +G EGYGF+EF S A AE+ LQ F+G MPN ++ F+LNWAS+ G
Sbjct: 139 GKVVTIKVIRNRHSGVSEGYGFVEFFSHASAEKALQNFSGHVMPNTDRAFKLNWASYSMG 198
Query: 166 EKRDD-TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFG 224
EKR + DH+IFVGDLA DVTD ML + F +Y S KGAKV+ID TGR++GYGFVRFG
Sbjct: 199 EKRAELASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFG 258
Query: 225 DESEQLRAMTEMNGVFCSTRPMRIGPATNKK---TVSASYQNSQVA-------------- 267
D++++ AMTEMNG +CSTRP+RIGPAT + T +++Y A
Sbjct: 259 DDNDKTHAMTEMNGAYCSTRPIRIGPATPRDLQPTSASAYGLVAKARANIWGEYVGDSGS 318
Query: 268 ----QSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSC 323
QSD D N T++VG LD T++ LR+ F++YG L VKIP GK+CGFVQF +R
Sbjct: 319 SPPRQSDSDSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPD 378
Query: 324 AEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQ 383
AEEAL+ LNG+ +G Q +RLSWGRSP++KQ++ D G Y Y YGYA+ P
Sbjct: 379 AEEALQGLNGSTIGKQAVRLSWGRSPASKQSRGDSGHRRNGMYYGTPFYGGYGYASPLPH 438
Query: 384 DPSM 387
P+M
Sbjct: 439 -PNM 441
>gi|10120421|gb|AAG13046.1|AC011807_5 Putative RNA binding protein [Arabidopsis thaliana]
Length = 468
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 177/373 (47%), Positives = 212/373 (56%), Gaps = 96/373 (25%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+++TLW+GDL +WMDETYL+TCF+HT EV +VKVIRNKQT Q EGYGF+EF+SR+ AE
Sbjct: 117 DVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEA 176
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQETFRAR 197
LQ+F+G MPN EQ FRLNWASF GEKR ++ PD +IFVGDLA DV+D +L ETF R
Sbjct: 177 LQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGR 236
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
YPS KGAKVVID TGR+KGYGFVRFGDE+E+ RA
Sbjct: 237 YPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRA------------------------- 271
Query: 258 SASYQNSQVAQSD----------------------------DDPN-----NTTVFVG--- 281
+ N S D N N VF+G
Sbjct: 272 -MTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQGLITCLDALNIASEVNCNVFIGLAL 330
Query: 282 -------------------------NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFV 316
LD+ VT+E L + FS +G++V VKIP GK CGFV
Sbjct: 331 TLAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFV 390
Query: 317 QFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAGYYGYAQGYENY 375
QFA+R AEEA+ LNGT +G +RLSWGRSP NKQ + D NQWN G Y QGY N
Sbjct: 391 QFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSP-NKQWRSDSGNQWNGG-YSRGQGYNN- 447
Query: 376 GYAAAAPQDPSMY 388
GY A QD +MY
Sbjct: 448 GY---ANQDSNMY 457
>gi|384244508|gb|EIE18010.1| hypothetical protein COCSUDRAFT_31894 [Coccomyxa subellipsoidea
C-169]
Length = 407
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/302 (49%), Positives = 204/302 (67%), Gaps = 32/302 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TLW+GDL YWMDE+++ + F TG +V+VK+IRNK T EGYGF+EF + AE+VL+
Sbjct: 11 KTLWMGDLAYWMDESFIYSIFVGTGNLVSVKIIRNKNTAVSEGYGFVEFATHEAAEQVLR 70
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
TFNG P+PN +Q FRLNWA+FG G+ D+ D+++FVGDLA DVTDY LQE FR + S
Sbjct: 71 TFNGCPIPNTDQIFRLNWAAFGVGKVTTDS-DYSVFVGDLAPDVTDYALQEHFRQFFASV 129
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS- 260
+ AKV+ D LTGR+KGYGFVRFG+E+E+ R++TEM+G ++RP+R+ AT KK+ +A+
Sbjct: 130 RSAKVITDPLTGRSKGYGFVRFGNEAERDRSLTEMSGHVINSRPIRVSIATAKKSQTATM 189
Query: 261 ---------YQN-------------SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQ 298
++N SQ SD DPNNTT+F+G L S V+++ LR LF +
Sbjct: 190 LPKQCQNFDFENFRLRVQGAPAPVASQPHPSDYDPNNTTLFIGGLSSGVSEDDLRVLFGR 249
Query: 299 YGQLVHVKIPAGKRCGFVQFADRSCAEEALRM--------LNGTQLGGQNIRLSWGRSPS 350
+G +V+ KIP GK CGFVQF R AE A+ L G LGG IR+SWGRS +
Sbjct: 250 FGDIVYTKIPPGKGCGFVQFVQRPAAESAMAQMQARCSPSLFGQILGGSTIRISWGRSST 309
Query: 351 NK 352
++
Sbjct: 310 SR 311
>gi|84453184|dbj|BAE71189.1| putative DNA binding protein [Trifolium pratense]
Length = 253
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 139/176 (78%), Positives = 150/176 (85%), Gaps = 1/176 (0%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQYWMDE YL CF+HTGEV VKVIRNKQT Q EGYGF+EF SRAGAER+
Sbjct: 66 EVRTLWIGDLQYWMDENYLYQCFSHTGEVGNVKVIRNKQTNQSEGYGFLEFTSRAGAERI 125
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARY 198
LQ +NG MPNG QNFRLNWA+F +GEKR DD+PD TIFVGDLAADVTDY L E FR RY
Sbjct: 126 LQQYNGNIMPNGGQNFRLNWATFSSGEKRHDDSPDFTIFVGDLAADVTDYHLTEVFRTRY 185
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
S KGAKVVIDR TGRTKGYGFVRF DE EQ+RAM+EM GV CSTRPMRIGPA+NK
Sbjct: 186 NSVKGAKVVIDRTTGRTKGYGFVRFADEGEQMRAMSEMQGVLCSTRPMRIGPASNK 241
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 86/178 (48%), Gaps = 20/178 (11%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GDL + + L + F + KV+ ++ T +++GYGF+ F + R +
Sbjct: 69 TLWIGDLQYWMDENYLYQCF-SHTGEVGNVKVIRNKQTNQSEGYGFLEFTSRAGAERILQ 127
Query: 235 EMNGVFCSTRPMRIGP--ATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 292
+ NG I P N + A++ + + + DD P+ T+FVG+L + VTD HL
Sbjct: 128 QYNG--------NIMPNGGQNFRLNWATFSSGE-KRHDDSPD-FTIFVGDLAADVTDYHL 177
Query: 293 RELF-SQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRMLNGTQLGGQNIRL 343
E+F ++Y + K+ + GFV+FAD A+ + G + +R+
Sbjct: 178 TEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADEGEQMRAMSEMQGVLCSTRPMRI 235
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 277 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRM 330
T+++G+L + + +L + FS G++ +VK+ K+ GF++F R+ AE L+
Sbjct: 69 TLWIGDLQYWMDENYLYQCFSHTGEVGNVKVIRNKQTNQSEGYGFLEFTSRAGAERILQQ 128
Query: 331 LNGTQL--GGQNIRLSWGRSPSNKQAQPD 357
NG + GGQN RL+W S ++ D
Sbjct: 129 YNGNIMPNGGQNFRLNWATFSSGEKRHDD 157
>gi|303290118|ref|XP_003064346.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453944|gb|EEH51251.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 420
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 152/288 (52%), Positives = 186/288 (64%), Gaps = 23/288 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLWIGDL YWMDE YL+ CFA G V +VK+IRNKQTG EGYGF+E RA AE L+
Sbjct: 14 TLWIGDLGYWMDEAYLHQCFASVGGVASVKIIRNKQTGYSEGYGFVEMCDRATAEHALRA 73
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEK--------RDDTPDHTIFVGDLAADVTDYMLQETF 194
NGT MPN +QN+RLNWASFG G + ++ DH+IFVGDL +V D+MLQE F
Sbjct: 74 LNGTQMPNAQQNYRLNWASFGVGARFAGGGDGGATNSNDHSIFVGDLPPEVNDFMLQEVF 133
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+RY S + A+VV D TGR+KG+GFVRF DES++ RA+ EMNG+ C +R MRI A +
Sbjct: 134 SSRYASVRNARVVTDPATGRSKGFGFVRFADESQRDRALVEMNGLACGSRNMRISLAIPR 193
Query: 255 KTVSASYQ--------------NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 300
K ++ YQ DD +N TVFVG L SI +D LR F YG
Sbjct: 194 KNMTVGYQGGGGGGGDGGGGGGGGGGGARDDGDDNCTVFVGGLGSI-SDAELRIHFEPYG 252
Query: 301 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
+LV++KIP GK CGFVQFA RSCAE A+ LN +G +RLSW RS
Sbjct: 253 ELVYIKIPHGKGCGFVQFAQRSCAEAAIAGLNNALIGTSRVRLSWVRS 300
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCA 324
++ +T+++G+L + + +L + F+ G + VKI K+ GFV+ DR+ A
Sbjct: 8 EEAGGSTLWIGDLGYWMDEAYLHQCFASVGGVASVKIIRNKQTGYSEGYGFVEMCDRATA 67
Query: 325 EEALRMLNGTQL--GGQNIRLSW 345
E ALR LNGTQ+ QN RL+W
Sbjct: 68 EHALRALNGTQMPNAQQNYRLNW 90
>gi|413921125|gb|AFW61057.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 322
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/243 (64%), Positives = 175/243 (72%), Gaps = 13/243 (5%)
Query: 31 QQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAA------GVAVPPQQQGQPGEIRTL 84
Q PPP + Y +PP P A + PQAA A P E+RTL
Sbjct: 69 QAPPPPQAAYGQALPP-----PQAAYGQAPPPPQAAYYGAVPAPAAVAAAPVGPSEVRTL 123
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
WIGDLQYWMD+ Y+ CFA TGEV VK+IR+K TGQ++GYGFIEFISRA AERVLQT+N
Sbjct: 124 WIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAERVLQTYN 183
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
GT MPN E FRLNWAS AGEKRDDTPD+TIFVGDLAADVTDY+LQETFRA YPS KGA
Sbjct: 184 GTMMPNVELPFRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGA 241
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNS 264
KVV D+LT RTKGYGFV+FGD +EQ RAMTEMNG+ CS+RPMRIGPA NKK +
Sbjct: 242 KVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPMRIGPAANKKATVVQEKGY 301
Query: 265 QVA 267
Q A
Sbjct: 302 QQA 304
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 23/178 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GDL + D + F A + K++ D+ TG+ +GYGF+ F + R +
Sbjct: 122 TLWIGDLQYWMDDNYIYGCF-ASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAERVLQ 180
Query: 235 EMNGVFCST--RPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 292
NG P R+ A+ + DD + T+FVG+L + VTD L
Sbjct: 181 TYNGTMMPNVELPFRLNWAS-------------AGEKRDDTPDYTIFVGDLAADVTDYVL 227
Query: 293 RELF-SQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRMLNGTQLGGQNIRL 343
+E F + Y + K+ K GFV+F D + A+ +NG + +R+
Sbjct: 228 QETFRAHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPMRI 285
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 277 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRM 330
T+++G+L + D ++ F+ G++ +VK+ K G F++F R+ AE L+
Sbjct: 122 TLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAERVLQT 181
Query: 331 LNGTQLGGQNI--RLSWGRSPSNKQAQPD 357
NGT + + RL+W + + PD
Sbjct: 182 YNGTMMPNVELPFRLNWASAGEKRDDTPD 210
>gi|46806694|dbj|BAD17764.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
Length = 396
Score = 283 bits (725), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 151/309 (48%), Positives = 193/309 (62%), Gaps = 41/309 (13%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E RT+W+GDLQYWMDE YL+ CF +GE V
Sbjct: 110 ENRTIWVGDLQYWMDEGYLHNCFGPSGEHV------------------------------ 139
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDD-TPDHTIFVGDLAADVTDYMLQETFRARY 198
MPN ++ F+LNWAS+ GEKR + DH+IFVGDLA DVTD ML + F +Y
Sbjct: 140 --------MPNTDRAFKLNWASYSMGEKRAELASDHSIFVGDLAVDVTDEMLMDLFAKKY 191
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S KGAKV+ID TGR++GYGFVRFGD++++ AMTEMNG +CSTRP+RIGPAT + S
Sbjct: 192 RSVKGAKVIIDANTGRSRGYGFVRFGDDNDKTHAMTEMNGAYCSTRPIRIGPAT-PRRSS 250
Query: 259 ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQF 318
+S QSD D N T++VG LD T++ LR+ F++YG L VKIP GK+CGFVQF
Sbjct: 251 GDSGSSPPRQSDSDSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQF 310
Query: 319 ADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYA 378
+R AEEAL+ LNG+ +G Q +RLSWGRSP++KQ++ D G Y Y YGYA
Sbjct: 311 VNRPDAEEALQGLNGSTIGKQAVRLSWGRSPASKQSRGDSGHRRNGMYYGTPFYGGYGYA 370
Query: 379 AAAPQDPSM 387
+ P P+M
Sbjct: 371 SPLPH-PNM 378
>gi|326532404|dbj|BAK05131.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 356
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 155/354 (43%), Positives = 210/354 (59%), Gaps = 23/354 (6%)
Query: 43 MMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF 102
M PP PP AA +G Q+ E R+L I +L WMDE YL +CF
Sbjct: 11 MAPPYHYHGPPQQEQAAPAAEDESGAGSGEQE----AESRSLRIRELFPWMDEDYLRSCF 66
Query: 103 AHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF 162
+ E+V + RN++T Q EG+G++ F A A+++L ++NG MPN +++F L+W +
Sbjct: 67 TRSPELVTAVITRNRETKQSEGFGYLTFSDHATADQILHSYNGQKMPNADRDFSLSWVQY 126
Query: 163 GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVR 222
A + +H I+VG L+ DVTD+ML F+ RYPS K AKV+ + R+KGYGFV
Sbjct: 127 AAADH-----EHAIYVGGLSFDVTDFMLHHVFKNRYPSVKKAKVIWNVFARRSKGYGFVV 181
Query: 223 FGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGN 282
FGD +E +AMTEMNG +CS+RPMRIGPAT K +Q D + NN+ +FVG
Sbjct: 182 FGDVNECTQAMTEMNGAYCSSRPMRIGPATFKSDF-----RTQGTYPDSNRNNSRLFVGQ 236
Query: 283 LDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
LDS VTDE L + FS YG+L VKI GK CGFV ++ R+ AEEAL +LNG+QLG I
Sbjct: 237 LDSCVTDEDLIKAFSPYGELT-VKIIEGKSCGFVTYSSRASAEEALTILNGSQLGDNIIT 295
Query: 343 LSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY-YGGYPGY 395
+ W R KQ +QWN +G+ Q GY P+DP++ Y G+PGY
Sbjct: 296 VVWARHAPKKQ-----DQWNGVDHGHPQS-SGPGY-GCCPEDPNIVGYTGHPGY 342
>gi|297737424|emb|CBI26625.3| unnamed protein product [Vitis vinifera]
Length = 194
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 131/166 (78%), Positives = 144/166 (86%), Gaps = 1/166 (0%)
Query: 93 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE 152
M+E YL CF+ TGEVV+VKVIRNKQTGQ EGYGFIE +RA AER+LQT+NGT MPN E
Sbjct: 1 MEENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELATRAAAERILQTYNGTLMPNSE 60
Query: 153 QNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRL 211
QNFRLNWA+ GAGE+R DDTPD+TIFVGDLA+DVTDY+LQETFR YPS KGAKVV DR
Sbjct: 61 QNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRT 120
Query: 212 TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
TGR+KGYGFVRFGDE EQLRAM EMNG+FCSTRPMRIGPA KK V
Sbjct: 121 TGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGPAATKKPV 166
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 19/139 (13%)
Query: 204 AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC--STRPMRIGPATNKKTVSASY 261
KV+ ++ TG+ +GYGF+ + R + NG S + R+ N T+ A
Sbjct: 19 VKVIRNKQTGQCEGYGFIELATRAAAERILQTYNGTLMPNSEQNFRL----NWATLGAGE 74
Query: 262 QNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELF-----SQYGQLVHVKIPAG--KRCG 314
+ ++DD P+ T+FVG+L S VTD L+E F S G V G K G
Sbjct: 75 R-----RADDTPD-YTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYG 128
Query: 315 FVQFADRSCAEEALRMLNG 333
FV+F D A+ +NG
Sbjct: 129 FVRFGDEGEQLRAMNEMNG 147
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 289 DEHLRELFSQYGQLVHVKIPAGKR---C---GFVQFADRSCAEEALRMLNGTQL--GGQN 340
+ +L FSQ G++V VK+ K+ C GF++ A R+ AE L+ NGT + QN
Sbjct: 3 ENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELATRAAAERILQTYNGTLMPNSEQN 62
Query: 341 IRLSWGRSPSNKQAQPD 357
RL+W + ++ D
Sbjct: 63 FRLNWATLGAGERRADD 79
>gi|110681486|emb|CAL25353.1| ACBF-like dna binding protein [Platanus x acerifolia]
Length = 216
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 127/188 (67%), Positives = 153/188 (81%), Gaps = 3/188 (1%)
Query: 76 GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAG 135
G E +T+W+GDL YWMD YLN CFAHTGEV+++KVIRNKQTGQ EGYGF+EF SR
Sbjct: 23 GLTEENKTIWVGDLHYWMDGNYLNNCFAHTGEVISIKVIRNKQTGQSEGYGFVEFFSREA 82
Query: 136 AERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETF 194
AE+VLQ +NGT MPN EQ FRLNWASF GE+R + DH+IFVGDL++DVTD +LQETF
Sbjct: 83 AEKVLQNYNGTAMPNTEQPFRLNWASFSMGERRSEAGSDHSIFVGDLSSDVTDTLLQETF 142
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+RYPS KGAKVVID TGR+KGYGFVRFGD++E+ RA++EMNG +CS RPMR+G AT +
Sbjct: 143 ASRYPSVKGAKVVIDANTGRSKGYGFVRFGDDNERSRAISEMNGAYCSNRPMRVGVATPR 202
Query: 255 KTVSASYQ 262
K S+ YQ
Sbjct: 203 K--SSGYQ 208
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 20/180 (11%)
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ TI+VGDL + L F A KV+ ++ TG+++GYGFV F +
Sbjct: 28 NKTIWVGDLHYWMDGNYLNNCF-AHTGEVISIKVIRNKQTGQSEGYGFVEFFSREAAEKV 86
Query: 233 MTEMNGVFC--STRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDE 290
+ NG + +P R+ N + S + S+ A SD ++FVG+L S VTD
Sbjct: 87 LQNYNGTAMPNTEQPFRL----NWASFSMGERRSE-AGSDH-----SIFVGDLSSDVTDT 136
Query: 291 HLRELF-SQY----GQLVHVKIPAG--KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRL 343
L+E F S+Y G V + G K GFV+F D + A+ +NG + +R+
Sbjct: 137 LLQETFASRYPSVKGAKVVIDANTGRSKGYGFVRFGDDNERSRAISEMNGAYCSNRPMRV 196
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 275 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEAL 328
N T++VG+L + +L F+ G+++ +K+ K+ GFV+F R AE+ L
Sbjct: 28 NKTIWVGDLHYWMDGNYLNNCFAHTGEVISIKVIRNKQTGQSEGYGFVEFFSREAAEKVL 87
Query: 329 RMLNGTQL--GGQNIRLSW 345
+ NGT + Q RL+W
Sbjct: 88 QNYNGTAMPNTEQPFRLNW 106
>gi|125586872|gb|EAZ27536.1| hypothetical protein OsJ_11491 [Oryza sativa Japonica Group]
Length = 257
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 128/186 (68%), Positives = 151/186 (81%), Gaps = 1/186 (0%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E+RTLWIGDLQ+WM+E YL CF+ GE+++ K+IRNKQTGQ EGYGFIEF S A AE+V
Sbjct: 65 EVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQV 124
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARY 198
LQ +NG MPNG Q F+LNWA+ GAGEKR DD D+TIFVGDLA+DVTD +LQ+TF+A Y
Sbjct: 125 LQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHY 184
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S KGAKVV DR TGR+KGYGFV+FGD EQ RAMTEMNG +CS+RPMRIGPA+NKK +
Sbjct: 185 QSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNIG 244
Query: 259 ASYQNS 264
Q S
Sbjct: 245 GQQQPS 250
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GDL + + L F ++ AK++ ++ TG+ +GYGF+ FG + + +
Sbjct: 68 TLWIGDLQFWMEENYLYNCF-SQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQ 126
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
NG ++ P N+ + + DD ++ T+FVG+L S VTD L++
Sbjct: 127 GYNG--------QMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQD 178
Query: 295 LFSQYGQLVHVKIPAGKRC-------GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
F + Q V R GFV+F D A+ +NG + +R+
Sbjct: 179 TFKAHYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPAS 238
Query: 348 SPSNKQAQPDPN 359
+ N Q P+
Sbjct: 239 NKKNIGGQQQPS 250
>gi|430812963|emb|CCJ29641.1| unnamed protein product [Pneumocystis jirovecii]
Length = 853
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 190/327 (58%), Gaps = 18/327 (5%)
Query: 43 MMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRT-LWIGDLQYWMDETYLNTC 101
++ P A P T +P Q GE +T LW+G+L+ W+DE ++
Sbjct: 27 IVAPSANASSPTFQTTNTTVQNVNNNQIPSSQSPLQGENKTALWMGELEPWVDEAFIRQV 86
Query: 102 FAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS 161
+ + GE V VK+IR+K +G GY F++F S A A + L + NGT +P + F+LNWAS
Sbjct: 87 WFNLGEQVNVKMIRDKFSGSNAGYCFVDFSSTAAASKAL-SLNGTIIPGTTRLFKLNWAS 145
Query: 162 FG--AGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYG 219
G K D P+ +IFVGDL +V +Y+L F++RYPS K AK++ D ++G ++GYG
Sbjct: 146 GGGLTDRKDDREPEFSIFVGDLGPEVNEYLLVSLFQSRYPSCKSAKIMTDLVSGMSRGYG 205
Query: 220 FVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNS--------------Q 265
FVRF DE +Q RA+TEM GV+C +RP+RI AT K S+ N Q
Sbjct: 206 FVRFSDEVDQRRALTEMQGVYCGSRPIRISTATPKNKPGMSHINMMHMGMSPLGYYGAPQ 265
Query: 266 VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAE 325
DPNNTTVFVG L S VT++ LR F +G++ +VKIP GK CGFVQF R AE
Sbjct: 266 PMNQFTDPNNTTVFVGGLSSFVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAE 325
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNK 352
A+ + G +G +RLSWGRS +N
Sbjct: 326 MAISQMQGYPIGNSRVRLSWGRSQNNS 352
>gi|378727642|gb|EHY54101.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 398
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 151/361 (41%), Positives = 202/361 (55%), Gaps = 40/361 (11%)
Query: 24 QQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRT 83
QQ+A P Q PPPQ P QP P A +P A P Q G GE +T
Sbjct: 12 QQEAAPGQIPPPQDG----AAPGQP-TDPSAQQQMAFQSPDPNVNAAP--QPGSGGEQKT 64
Query: 84 -LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G+L+ W+DE ++ + GE V+VK+IR+K +G GY F++F S A + LQ
Sbjct: 65 TLWMGELEPWIDENFVRNLWFQMGEQVSVKMIRDKFSGSNAGYCFVDFSSPQAAAKALQ- 123
Query: 143 FNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPS 200
+G PMPN + F+LNWA+ G ++RDD P+++IFVGDL +V +Y+L F++R+PS
Sbjct: 124 LSGQPMPNSTRPFKLNWATGGGLADRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRFPS 183
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT---- 256
K AK++ D L+G ++GYGFVRF DE +Q RA+TEM GV+C RPMRI AT K
Sbjct: 184 CKSAKIMTDPLSGMSRGYGFVRFSDEGDQQRALTEMQGVYCGNRPMRISTATPKNKGLPM 243
Query: 257 -------------------------VSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEH 291
Q Q DPNNTTVFVG L VT++
Sbjct: 244 QGANMGMPGPAGPMGYPPMGGPPMPYYGQQQTPQPMNQFTDPNNTTVFVGGLSGYVTEDE 303
Query: 292 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 351
LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWGRS +N
Sbjct: 304 LRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 363
Query: 352 K 352
Sbjct: 364 S 364
>gi|34395215|dbj|BAC83714.1| RNA Binding Protein-like [Oryza sativa Japonica Group]
gi|50508741|dbj|BAD31317.1| RNA Binding Protein-like [Oryza sativa Japonica Group]
Length = 206
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 124/181 (68%), Positives = 144/181 (79%), Gaps = 3/181 (1%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAER 138
EIR+LWIGDLQYWMDE+YL+ FA G+ V +VKVIRNKQ+G EGYGFIEF S A AE
Sbjct: 11 EIRSLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQSHAAAEY 70
Query: 139 VLQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQETFRA 196
L FNG M N +Q F+LNWAS GAGE+R DD P+HTIFVGDLA+DVTD ML+E F+
Sbjct: 71 ALANFNGRMMLNVDQLFKLNWASSGAGERRAADDGPEHTIFVGDLASDVTDSMLEEAFKT 130
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
YPS +GAKVV D++TGR+KGYGFVRFGDE+EQ RAMTEMNG STR MR+GPA NKK
Sbjct: 131 SYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLSTRQMRLGPAANKKN 190
Query: 257 V 257
+
Sbjct: 191 M 191
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 14/176 (7%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + L F KV+ ++ +G ++GYGF+ F + A+
Sbjct: 14 SLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQSHAAAEYALA 73
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
NG M + K AS + +DD P +T +FVG+L S VTD L E
Sbjct: 74 NFNG------RMMLNVDQLFKLNWASSGAGERRAADDGPEHT-IFVGDLASDVTDSMLEE 126
Query: 295 LFS------QYGQLVHVKIPA-GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRL 343
F + ++V K+ K GFV+F D + A+ +NG L + +RL
Sbjct: 127 AFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLSTRQMRL 182
>gi|70982362|ref|XP_746709.1| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
fumigatus Af293]
gi|66844333|gb|EAL84671.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus fumigatus Af293]
gi|159123048|gb|EDP48168.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus fumigatus A1163]
Length = 418
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 138/311 (44%), Positives = 185/311 (59%), Gaps = 29/311 (9%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
A P QQG G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G GY F+
Sbjct: 55 AAPVAQQGNEGKT-TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFV 113
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADV 185
+F S A A + L + NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL +V
Sbjct: 114 DFSSPAAAAKAL-SLNGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEV 172
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
+Y+L F+ R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM GV+C RP
Sbjct: 173 NEYVLVSLFQNRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRP 232
Query: 246 MRIGPATNKKTVSAS------------------------YQNSQVAQSDDDPNNTTVFVG 281
MRI AT K Y Q DPNNTTVFVG
Sbjct: 233 MRISTATPKNKGPGVVPGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVG 292
Query: 282 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +
Sbjct: 293 GLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRV 352
Query: 342 RLSWGRSPSNK 352
RLSWGRS +N
Sbjct: 353 RLSWGRSQNNS 363
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 8/109 (7%)
Query: 52 PPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAV 111
P M+ A P A P Q T+++G L ++ E L + F GE+ V
Sbjct: 257 PAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYV 316
Query: 112 KVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160
K+ K G GF++F+ R AE + G P+ G RL+W
Sbjct: 317 KIPPGK------GCGFVQFVQRHAAEMAINQMQGYPI--GNSRVRLSWG 357
>gi|325183868|emb|CCA18326.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325183943|emb|CCA18401.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 429
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 198/340 (58%), Gaps = 38/340 (11%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +TLW+GD+Q DE Y+ + FA E ++K+IR+K TG GYGF+EF S+ GA+ V
Sbjct: 4 DCKTLWMGDIQLNWDEAYIGSLFASAVEQPSIKLIRDKVTGYPAGYGFLEFPSQQGAQAV 63
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
L TFNG +PN FRLNW GAG +R DT DH+IFVGDLA +V+D +L TF R+
Sbjct: 64 LNTFNGQIVPNTIHRFRLNW---GAGGRRIDTVEDHSIFVGDLAPEVSDELLLSTFSTRF 120
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S +GAKVVID +T KG+GFVRFGD+ E +A+ MNGV+CS+RPMR+ AT++
Sbjct: 121 SSVRGAKVVIDPVTRMPKGFGFVRFGDKGEADQALQTMNGVYCSSRPMRVSVATDRTKTR 180
Query: 259 A------SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 312
SY ++++ NTTVF+G LD T++ LR F G+++ VK+P G+
Sbjct: 181 GIMPPPISYTVVGTGNTEEEGANTTVFIGGLDPSTTEDDLRARFGVIGEIMSVKVPPGRG 240
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA-----------------Q 355
CGFVQ+ + A+ A+ +NG + G +R +WGRS + + A
Sbjct: 241 CGFVQYVTKDAADVAINQMNGALINGVKVRCAWGRSAAARLAGSTTPAAGYYQQYPYQQT 300
Query: 356 PDPNQWNAGYY--GYAQGYENYGYAAAAPQDPSMYYGGYP 393
N + Y+ GYAQ +Y Y A YGGYP
Sbjct: 301 AYQNAYGYNYFPQGYAQQPGSYAYNA---------YGGYP 331
>gi|125558527|gb|EAZ04063.1| hypothetical protein OsI_26200 [Oryza sativa Indica Group]
Length = 323
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 124/181 (68%), Positives = 144/181 (79%), Gaps = 3/181 (1%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAER 138
EIR+LWIGDLQYWMDE+YL+ FA G+ V +VKVIRNKQ+G EGYGFIEF S A AE
Sbjct: 126 EIRSLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQSHAAAEY 185
Query: 139 VLQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQETFRA 196
L FNG M N +Q F+LNWAS GAGE+R DD P+HTIFVGDLA+DVTD ML+E F+
Sbjct: 186 ALANFNGRMMLNVDQLFKLNWASSGAGERRAADDGPEHTIFVGDLASDVTDSMLEEAFKT 245
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
YPS +GAKVV D++TGR+KGYGFVRFGDE+EQ RAMTEMNG STR MR+GPA NKK
Sbjct: 246 SYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLSTRQMRLGPAANKKN 305
Query: 257 V 257
+
Sbjct: 306 M 306
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 14/176 (7%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + L F KV+ ++ +G ++GYGF+ F + A+
Sbjct: 129 SLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQSHAAAEYALA 188
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
NG M + K AS + +DD P +T +FVG+L S VTD L E
Sbjct: 189 NFNGR------MMLNVDQLFKLNWASSGAGERRAADDGPEHT-IFVGDLASDVTDSMLEE 241
Query: 295 LFS------QYGQLVHVKIPA-GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRL 343
F + ++V K+ K GFV+F D + A+ +NG L + +RL
Sbjct: 242 AFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLSTRQMRL 297
>gi|125600441|gb|EAZ40017.1| hypothetical protein OsJ_24455 [Oryza sativa Japonica Group]
Length = 323
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 124/181 (68%), Positives = 144/181 (79%), Gaps = 3/181 (1%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAER 138
EIR+LWIGDLQYWMDE+YL+ FA G+ V +VKVIRNKQ+G EGYGFIEF S A AE
Sbjct: 126 EIRSLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQSHAAAEY 185
Query: 139 VLQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDYMLQETFRA 196
L FNG M N +Q F+LNWAS GAGE+R DD P+HTIFVGDLA+DVTD ML+E F+
Sbjct: 186 ALANFNGRMMLNVDQLFKLNWASSGAGERRAADDGPEHTIFVGDLASDVTDSMLEEAFKT 245
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
YPS +GAKVV D++TGR+KGYGFVRFGDE+EQ RAMTEMNG STR MR+GPA NKK
Sbjct: 246 SYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLSTRQMRLGPAANKKN 305
Query: 257 V 257
+
Sbjct: 306 M 306
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 14/176 (7%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + L F KV+ ++ +G ++GYGF+ F + A+
Sbjct: 129 SLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQSHAAAEYALA 188
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
NG M + K AS + +DD P +T +FVG+L S VTD L E
Sbjct: 189 NFNGR------MMLNVDQLFKLNWASSGAGERRAADDGPEHT-IFVGDLASDVTDSMLEE 241
Query: 295 LFS------QYGQLVHVKIPA-GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRL 343
F + ++V K+ K GFV+F D + A+ +NG L + +RL
Sbjct: 242 AFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLSTRQMRL 297
>gi|171695760|ref|XP_001912804.1| hypothetical protein [Podospora anserina S mat+]
gi|170948122|emb|CAP60286.1| unnamed protein product [Podospora anserina S mat+]
Length = 390
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 135/313 (43%), Positives = 189/313 (60%), Gaps = 29/313 (9%)
Query: 67 GVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGY 125
G A P Q +TLW+G+++ WMDE ++ F++T E V VKVIR++ +G GY
Sbjct: 26 GFASPSQMPAPSEAAKTLWMGEMEPWMDENFIKNVFSNTSAENVQVKVIRDRNSGN-AGY 84
Query: 126 GFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAA 183
F+EF + A++ L NGTP+PN ++ F+LNWAS G ++RDD P+++IFVGDL
Sbjct: 85 CFVEFSTPEAAQKAL-ALNGTPVPNSQRVFKLNWASGGGLVDRRDDRGPEYSIFVGDLGP 143
Query: 184 DVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST 243
+V +++L F++R+PS K AK++ D +TG+++GYGFVRF DES+Q RA+ EM GV+C
Sbjct: 144 EVNEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDESDQQRALVEMQGVYCGN 203
Query: 244 RPMRIGPATNKKTV------------------------SASYQNSQVAQSDDDPNNTTVF 279
RPMRI AT K +A + Q DPNNTTVF
Sbjct: 204 RPMRISTATPKTRYMMPPVPGAQAPMWGGVPPYGYAQPAAPFNPMQPMNQFTDPNNTTVF 263
Query: 280 VGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQ 339
VG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G
Sbjct: 264 VGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNS 323
Query: 340 NIRLSWGRSPSNK 352
+RLSWGRS +N
Sbjct: 324 RVRLSWGRSQNNS 336
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 13/122 (10%)
Query: 43 MMPPQPQAQPPAMWATQA----AAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYL 98
MMPP P AQ P MW A P A + P Q T+++G L ++ E L
Sbjct: 218 MMPPVPGAQAP-MWGGVPPYGYAQPAAPFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDEL 276
Query: 99 NTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158
+ F GE+ VK+ K G GF++F+ R AE + G P+ G RL+
Sbjct: 277 RSFFQGFGEITYVKIPPGK------GCGFVQFVHRHAAEMAINQMQGYPI--GNSRVRLS 328
Query: 159 WA 160
W
Sbjct: 329 WG 330
>gi|212546039|ref|XP_002153173.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces marneffei ATCC 18224]
gi|210064693|gb|EEA18788.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces marneffei ATCC 18224]
Length = 392
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 150/367 (40%), Positives = 204/367 (55%), Gaps = 40/367 (10%)
Query: 16 MAAHQYQYQ-QQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQ 74
M+ Y+YQ QQ P P+ M P PA +A P AA Q
Sbjct: 1 MSFQNYEYQNQQDGAASAGAPTPADTNMTGQADPS---PAPFAGTPGEPSAAA-----PQ 52
Query: 75 QGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRA 134
QG G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G GY F++F S A
Sbjct: 53 QGGDGKT-TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSAA 111
Query: 135 GAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADVTDYMLQ 191
A + L + NGTPMPN + F+LNWA+ G A RD+ P+++IFVGDL +V +Y+L
Sbjct: 112 AAGKAL-SLNGTPMPNTTRAFKLNWATGGGLADRGRDERGPEYSIFVGDLGPEVNEYVLV 170
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA++EM GV+C RPMRI A
Sbjct: 171 SLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTA 230
Query: 252 TNKKTVSAS--------------------------YQNSQVAQSDDDPNNTTVFVGNLDS 285
T K Y Q DPNNTTVFVG L
Sbjct: 231 TPKNKGPGVGPGGMGMPGPAGIYPPAAMGGPPMGFYGAPQPMNQFTDPNNTTVFVGGLSG 290
Query: 286 IVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 345
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSW
Sbjct: 291 YVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSW 350
Query: 346 GRSPSNK 352
GRS +N
Sbjct: 351 GRSQNNS 357
>gi|83774240|dbj|BAE64365.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 488
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/310 (43%), Positives = 185/310 (59%), Gaps = 32/310 (10%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIE 129
V P Q+G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G GY F++
Sbjct: 56 VQPAQEGK----TTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVD 111
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADVT 186
F S A A + L + NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL +V
Sbjct: 112 FSSPAAAAKAL-SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVN 170
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
+Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA++EM GV+C RPM
Sbjct: 171 EYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPM 230
Query: 247 RIGPATNKKTVSAS------------------------YQNSQVAQSDDDPNNTTVFVGN 282
RI AT K Y Q DPNNTTVFVG
Sbjct: 231 RISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGG 290
Query: 283 LDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +R
Sbjct: 291 LSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVR 350
Query: 343 LSWGRSPSNK 352
LSWGRS +N
Sbjct: 351 LSWGRSQNNS 360
>gi|115446801|ref|NP_001047180.1| Os02g0567900 [Oryza sativa Japonica Group]
gi|113536711|dbj|BAF09094.1| Os02g0567900, partial [Oryza sativa Japonica Group]
Length = 259
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/241 (54%), Positives = 169/241 (70%), Gaps = 3/241 (1%)
Query: 148 MPNGEQNFRLNWASFGAGEKRDD-TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKV 206
MPN ++ F+LNWAS+ GEKR + DH+IFVGDLA DVTD ML + F +Y S KGAKV
Sbjct: 3 MPNTDRAFKLNWASYSMGEKRAELASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKV 62
Query: 207 VIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQV 266
+ID TGR++GYGFVRFGD++++ AMTEMNG +CSTRP+RIGPAT + S +S
Sbjct: 63 IIDANTGRSRGYGFVRFGDDNDKTHAMTEMNGAYCSTRPIRIGPAT-PRRSSGDSGSSPP 121
Query: 267 AQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEE 326
QSD D N T++VG LD T++ LR+ F++YG L VKIP GK+CGFVQF +R AEE
Sbjct: 122 RQSDSDSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPDAEE 181
Query: 327 ALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPS 386
AL+ LNG+ +G Q +RLSWGRSP++KQ++ D G Y Y YGYA+ P P+
Sbjct: 182 ALQGLNGSTIGKQAVRLSWGRSPASKQSRGDSGHRRNGMYYGTPFYGGYGYASPLPH-PN 240
Query: 387 M 387
M
Sbjct: 241 M 241
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+++G L E L FA G++ +VK+ KQ GF++F++R AE LQ
Sbjct: 131 RTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQC------GFVQFVNRPDAEEALQ 184
Query: 142 TFNGTPMPNGEQNFRLNW 159
NG+ + G+Q RL+W
Sbjct: 185 GLNGSTI--GKQAVRLSW 200
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 16/185 (8%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGYGFIEFI 131
+++ + ++++GDL + + L FA V KVI + TG+ GYGF+ F
Sbjct: 21 EKRAELASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFG 80
Query: 132 SRAGAERVLQTFNGT-----PMPNGEQNFRLNWASFGAGEKR---DDTPDHTIFVGDLAA 183
+ NG P+ G R + G+ R D+ + TI+VG L
Sbjct: 81 DDNDKTHAMTEMNGAYCSTRPIRIGPATPRRSSGDSGSSPPRQSDSDSTNRTIYVGGLDP 140
Query: 184 DVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST 243
+ T+ L++ F A+Y K+ + K GFV+F + + A+ +NG
Sbjct: 141 NATEDELRKAF-AKYGDLASVKIPV------GKQCGFVQFVNRPDAEEALQGLNGSTIGK 193
Query: 244 RPMRI 248
+ +R+
Sbjct: 194 QAVRL 198
>gi|296412343|ref|XP_002835884.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629680|emb|CAZ80041.1| unnamed protein product [Tuber melanosporum]
Length = 412
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/302 (45%), Positives = 188/302 (62%), Gaps = 15/302 (4%)
Query: 60 AAAPQAAGVAVPPQQQGQPGEI------RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKV 113
+A+P A PP G TLW+G+L+ W+DE ++ + GE V VK+
Sbjct: 16 SASPTGASAGGPPPTAGSSNGAAGSDAKTTLWMGELEPWIDEAFVRNVWYQLGEGVNVKM 75
Query: 114 IRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT- 171
IR+K +G GY F++F S A A + L T N TP+P + F+LNWAS G ++RDD
Sbjct: 76 IRDKFSGN-AGYCFVDFSSPAAAAKAL-TLNATPIPGSSRPFKLNWASGGGLADRRDDRG 133
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P+++IFVGDL +V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE +Q R
Sbjct: 134 PEYSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPVSGMSRGYGFVRFSDEMDQQR 193
Query: 232 AMTEMNGVFCSTRPMRIGPATNK-KTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDE 290
A+TEM GV+C RPMRI AT K K+ + +Q DPNNTTVFVG L VT++
Sbjct: 194 ALTEMQGVYCGNRPMRISTATPKNKSATGGPPMNQFT----DPNNTTVFVGGLSGYVTED 249
Query: 291 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWGRS +
Sbjct: 250 ELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQN 309
Query: 351 NK 352
N
Sbjct: 310 NS 311
>gi|391868084|gb|EIT77307.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 395
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/310 (43%), Positives = 185/310 (59%), Gaps = 32/310 (10%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIE 129
V P Q+G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G GY F++
Sbjct: 56 VQPAQEGK----TTLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVD 111
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADVT 186
F S A A + L + NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL +V
Sbjct: 112 FSSPAAAAKAL-SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVN 170
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
+Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA++EM GV+C RPM
Sbjct: 171 EYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPM 230
Query: 247 RIGPATNKKTVSAS------------------------YQNSQVAQSDDDPNNTTVFVGN 282
RI AT K Y Q DPNNTTVFVG
Sbjct: 231 RISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGG 290
Query: 283 LDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +R
Sbjct: 291 LSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVR 350
Query: 343 LSWGRSPSNK 352
LSWGRS +N
Sbjct: 351 LSWGRSQNNS 360
>gi|302893889|ref|XP_003045825.1| hypothetical protein NECHADRAFT_66100 [Nectria haematococca mpVI
77-13-4]
gi|256726752|gb|EEU40112.1| hypothetical protein NECHADRAFT_66100 [Nectria haematococca mpVI
77-13-4]
Length = 408
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 138/321 (42%), Positives = 186/321 (57%), Gaps = 37/321 (11%)
Query: 67 GVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQIEGY 125
G PP GQ TLW+G+L+ WMDE ++ F + GE V VKVIR+K +G GY
Sbjct: 35 GAVAPPPGAGQEPPKTTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSGN-AGY 93
Query: 126 GFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAA 183
F+EF S A + L NGTP+PN + F+LNWAS G ++RDD P+++IFVGDL
Sbjct: 94 CFVEFQSPDAATKAL-GLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGP 152
Query: 184 DVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST 243
+V +Y+L F+AR+PS K AK++ D ++G+++GYGFVRF DE++Q RA+ EM GV+C
Sbjct: 153 EVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGN 212
Query: 244 RPMRIGPATNKKTVSASYQNSQVAQSD--------------------------------D 271
RPMRI AT K + + + Q
Sbjct: 213 RPMRISTATPKNRGNHGFGHGQHNGGPMMGGGVMPQQQMWNGAQGFYGGFNPATQMNQFT 272
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ +
Sbjct: 273 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQM 332
Query: 332 NGTQLGGQNIRLSWGRSPSNK 352
G +G +RLSWGRS +N
Sbjct: 333 QGYPIGNSRVRLSWGRSQNNS 353
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 35/221 (15%)
Query: 163 GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVR 222
GAG+ + P T+++G+L + + ++ F + T KV+ D+ +G GY FV
Sbjct: 42 GAGQ---EPPKTTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSGNA-GYCFVE 97
Query: 223 FGDESEQLRAMTEMNG--VFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFV 280
F +A+ +NG V S+R ++ A+ V + DD ++FV
Sbjct: 98 FQSPDAATKALG-LNGTPVPNSSRQFKLNWASGGGLVD---------RRDDRGPEYSIFV 147
Query: 281 GNLDSIVTDEHLRELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNG 333
G+L V + L LF +++ KI + GFV+F+D + + AL + G
Sbjct: 148 GDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQG 207
Query: 334 TQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYEN 374
G + +R+S A P N G +G+ G N
Sbjct: 208 VYCGNRPMRIS--------TATPK----NRGNHGFGHGQHN 236
>gi|303315831|ref|XP_003067920.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240107596|gb|EER25775.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320032017|gb|EFW13973.1| mRNA binding post-transcriptional regulator [Coccidioides posadasii
str. Silveira]
gi|392867443|gb|EAS29326.2| mRNA binding post-transcriptional regulator [Coccidioides immitis
RS]
Length = 400
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 143/339 (42%), Positives = 193/339 (56%), Gaps = 36/339 (10%)
Query: 44 MPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFA 103
M QP A P Q AP A A QQ G+ TLW+G+L+ W+DE ++ +
Sbjct: 33 MTGQPDATAPGF---QGPAPGEASAAPGGQQSGE--GKTTLWMGELEPWIDENFIRNIWY 87
Query: 104 HTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG 163
GE V VK+IR+K +G GY F++F + A A + L + NGTPMPN + F+LNWA+ G
Sbjct: 88 QMGEQVNVKMIRDKFSGSNAGYCFVDFATPAAAAKAL-SVNGTPMPNTNRPFKLNWATGG 146
Query: 164 AGEKR---DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGF 220
R D TP+++IFVGDL +V +Y+L F++R+PS K AK++ D ++G ++GYGF
Sbjct: 147 GLSDRSREDRTPEYSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGF 206
Query: 221 VRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS-------------------- 260
VRF DE++Q RA+TEM GV+C RPMRI AT K +
Sbjct: 207 VRFSDETDQQRALTEMQGVYCGNRPMRISTATPKNKGPSGAPGQMGMPGAPPAGMYPPAM 266
Query: 261 -------YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 313
Y Q DPNNTTVFVG L VT++ LR F +G++ +VKIP GK C
Sbjct: 267 GGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGC 326
Query: 314 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
GFVQF R AE A+ + G +G +RLSWGRS +N
Sbjct: 327 GFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNS 365
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 34/259 (13%)
Query: 160 ASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYG 219
AS G ++ T+++G+L + + ++ + K++ D+ +G GY
Sbjct: 52 ASAAPGGQQSGEGKTTLWMGELEPWIDENFIRNIWYQMGEQVN-VKMIRDKFSGSNAGYC 110
Query: 220 FVRFGDESEQLRAMTEMNGVFC--STRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTT 277
FV F + +A++ +NG + RP ++ AT S ++ D P +
Sbjct: 111 FVDFATPAAAAKALS-VNGTPMPNTNRPFKLNWATGGGL-------SDRSREDRTPE-YS 161
Query: 278 VFVGNLDSIVTDEHLRELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRM 330
+FVG+L V + L LF S++ KI + GFV+F+D + + AL
Sbjct: 162 IFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTE 221
Query: 331 LNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWN------AGYYGYAQGYENYGYAAA---- 380
+ G G + +R+S +P NK P Q AG Y A G GY A
Sbjct: 222 MQGVYCGNRPMRISTA-TPKNKGPSGAPGQMGMPGAPPAGMYPPAMGGPPMGYYGAPQPM 280
Query: 381 ----APQDPSMYYGGYPGY 395
P + +++ GG GY
Sbjct: 281 NQFTDPNNTTVFVGGLSGY 299
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Query: 35 PQPSPYMMMMPPQPQAQ--PPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYW 92
P +P M MP P A PPAM P A P Q T+++G L +
Sbjct: 244 PSGAPGQMGMPGAPPAGMYPPAM----GGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGY 299
Query: 93 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE 152
+ E L + F GE+ VK+ K G GF++F+ R AE + G P+ G
Sbjct: 300 VTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVQRHAAEMAINQMQGYPI--GN 351
Query: 153 QNFRLNWA 160
RL+W
Sbjct: 352 SRVRLSWG 359
>gi|119177688|ref|XP_001240593.1| hypothetical protein CIMG_07756 [Coccidioides immitis RS]
Length = 401
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 143/339 (42%), Positives = 193/339 (56%), Gaps = 36/339 (10%)
Query: 44 MPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFA 103
M QP A P Q AP A A QQ G+ TLW+G+L+ W+DE ++ +
Sbjct: 33 MTGQPDATAPGF---QGPAPGEASAAPGGQQSGE--GKTTLWMGELEPWIDENFIRNIWY 87
Query: 104 HTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG 163
GE V VK+IR+K +G GY F++F + A A + L + NGTPMPN + F+LNWA+ G
Sbjct: 88 QMGEQVNVKMIRDKFSGSNAGYCFVDFATPAAAAKAL-SVNGTPMPNTNRPFKLNWATGG 146
Query: 164 AGEKR---DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGF 220
R D TP+++IFVGDL +V +Y+L F++R+PS K AK++ D ++G ++GYGF
Sbjct: 147 GLSDRSREDRTPEYSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGF 206
Query: 221 VRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS-------------------- 260
VRF DE++Q RA+TEM GV+C RPMRI AT K +
Sbjct: 207 VRFSDETDQQRALTEMQGVYCGNRPMRISTATPKNKGPSGAPGQMGMPGAPPAGMYPPAM 266
Query: 261 -------YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 313
Y Q DPNNTTVFVG L VT++ LR F +G++ +VKIP GK C
Sbjct: 267 GGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGC 326
Query: 314 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
GFVQF R AE A+ + G +G +RLSWGRS +N
Sbjct: 327 GFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNS 365
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 110/259 (42%), Gaps = 34/259 (13%)
Query: 160 ASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYG 219
AS G ++ T+++G+L + + ++ + + K++ D+ +G GY
Sbjct: 52 ASAAPGGQQSGEGKTTLWMGELEPWIDENFIRNIWY-QMGEQVNVKMIRDKFSGSNAGYC 110
Query: 220 FVRFGDESEQLRAMTEMNGVFC--STRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTT 277
FV F + +A++ +NG + RP ++ AT S ++ D P +
Sbjct: 111 FVDFATPAAAAKALS-VNGTPMPNTNRPFKLNWATGGGL-------SDRSREDRTPE-YS 161
Query: 278 VFVGNLDSIVTDEHLRELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRM 330
+FVG+L V + L LF S++ KI + GFV+F+D + + AL
Sbjct: 162 IFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTE 221
Query: 331 LNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWN------AGYYGYAQGYENYGYAAA---- 380
+ G G + +R+S +P NK P Q AG Y A G GY A
Sbjct: 222 MQGVYCGNRPMRISTA-TPKNKGPSGAPGQMGMPGAPPAGMYPPAMGGPPMGYYGAPQPM 280
Query: 381 ----APQDPSMYYGGYPGY 395
P + +++ GG GY
Sbjct: 281 NQFTDPNNTTVFVGGLSGY 299
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Query: 35 PQPSPYMMMMPPQPQAQ--PPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYW 92
P +P M MP P A PPAM P A P Q T+++G L +
Sbjct: 244 PSGAPGQMGMPGAPPAGMYPPAM----GGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGY 299
Query: 93 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE 152
+ E L + F GE+ VK+ K G GF++F+ R AE + G P+ G
Sbjct: 300 VTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVQRHAAEMAINQMQGYPI--GN 351
Query: 153 QNFRLNWA 160
RL+W
Sbjct: 352 SRVRLSWG 359
>gi|429854847|gb|ELA29832.1| mRNA binding post-transcriptional regulator, partial
[Colletotrichum gloeosporioides Nara gc5]
Length = 366
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 136/310 (43%), Positives = 181/310 (58%), Gaps = 42/310 (13%)
Query: 83 TLWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
TLW+G+L+ WMDE ++ F TGE V VKVIR+K +G GY F+EF S A + LQ
Sbjct: 58 TLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDKTSGN-AGYCFVEFTSSDAASKALQ 116
Query: 142 TFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYP 199
NGTP+PN + F+LNWAS G ++RDD P+++IFVGDL +V +Y+L F+AR+P
Sbjct: 117 -LNGTPVPNSNRAFKLNWASGGGINDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 175
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S K AK++ D ++G+++GYGFVRF DE +Q RA+ EM GV+C RPMRI AT K
Sbjct: 176 SCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRPMRISTATPKNRNHG 235
Query: 260 SYQN-------------------------------------SQVAQSDDDPNNTTVFVGN 282
YQ+ Q DPNNTTVFVG
Sbjct: 236 PYQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAYGAPYNPPGQQMNQFTDPNNTTVFVGG 295
Query: 283 LDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
L VT++ LR F +G++ +V+IP GK CGFVQF R AE A+ + G +G +R
Sbjct: 296 LSGYVTEDELRSFFQGFGEITYVQIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVR 355
Query: 343 LSWGRSPSNK 352
LSWGRS +N
Sbjct: 356 LSWGRSQNNS 365
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 97/236 (41%), Gaps = 33/236 (13%)
Query: 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
D +T+++G+L + + ++ F KV+ D+ +G GY FV F
Sbjct: 53 DANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDKTSGNA-GYCFVEFTSSDAA 111
Query: 230 LRAMTEMNG--VFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
+A+ ++NG V S R ++ A+ + DD ++FVG+L V
Sbjct: 112 SKAL-QLNGTPVPNSNRAFKLNWASGGGIND---------RRDDRGPEYSIFVGDLGPEV 161
Query: 288 TDEHLRELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 340
+ L LF +++ KI + GFV+F D + AL + G G +
Sbjct: 162 NEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRP 221
Query: 341 IRLSWGRSPSNKQAQPDPNQWN-----------AGYYGYAQGYENYGYAAAAPQDP 385
+R+S +P N+ P + N G+YG + YG A AP +P
Sbjct: 222 MRISTA-TPKNRNHGPYQHHGNQMMAPGLPPHQQGFYGVPSPAQ-YGGAYGAPYNP 275
>gi|346977902|gb|EGY21354.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
dahliae VdLs.17]
Length = 418
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 144/340 (42%), Positives = 187/340 (55%), Gaps = 50/340 (14%)
Query: 61 AAPQAAGVAVPPQQQ-------GQPGEIRTLWIGDLQYWMDETYLNTCFAH-TGEVVAVK 112
P AAG+ PP G TLW+G+L+ WMDE ++ FA TGE V VK
Sbjct: 23 GTPVAAGMGYPPNANELTGPGNSPDGNKTTLWMGELEPWMDENFIKGVFATATGEQVNVK 82
Query: 113 VIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT 171
VIR+K +G GY F+EF S A + L NGTP+PN + F+LNWAS G ++RDD
Sbjct: 83 VIRDKSSGN-AGYCFVEFNSTDAASKAL-ALNGTPVPNSARMFKLNWASGGGINDRRDDR 140
Query: 172 -PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
P+ +IFVGDL +V +++L F+AR+PS K AK++ D +TG+++GYGFVRF DE +Q
Sbjct: 141 GPEFSIFVGDLGPEVNEFVLVSLFQARFPSCKSAKIMTDAVTGQSRGYGFVRFTDEQDQQ 200
Query: 231 RAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQ---------------------- 268
RA+ EM GV+C RPMRI AT K Y Q Q
Sbjct: 201 RALVEMQGVYCGNRPMRISTATPKNRNHGPYGAQQGHQMPPAMHPHQPQAFYGVPPGPQF 260
Query: 269 ----------------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 312
DPNNTTVFVG L VT++ LR F +G++ +VKIP GK
Sbjct: 261 NQGYGAAPQFQQQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKG 320
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
CGFVQF R AE A+ + G +G +RLSWGRS +N
Sbjct: 321 CGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNS 360
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 32/234 (13%)
Query: 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
D T+++G+L + + ++ F KV+ D+ +G GY FV F
Sbjct: 47 DGNKTTLWMGELEPWMDENFIKGVFATATGEQVNVKVIRDKSSGNA-GYCFVEFNSTDAA 105
Query: 230 LRAMTEMNG--VFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
+A+ +NG V S R ++ A+ + DD ++FVG+L V
Sbjct: 106 SKALA-LNGTPVPNSARMFKLNWASGGGIND---------RRDDRGPEFSIFVGDLGPEV 155
Query: 288 TDEHLRELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 340
+ L LF +++ KI + GFV+F D + AL + G G +
Sbjct: 156 NEFVLVSLFQARFPSCKSAKIMTDAVTGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRP 215
Query: 341 IRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPG 394
+R+S +P N+ N G YG QG++ A P P +YG PG
Sbjct: 216 MRISTA-TPKNR---------NHGPYGAQQGHQM--PPAMHPHQPQAFYGVPPG 257
>gi|302420775|ref|XP_003008218.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
gi|261353869|gb|EEY16297.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
Length = 430
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 144/340 (42%), Positives = 187/340 (55%), Gaps = 50/340 (14%)
Query: 61 AAPQAAGVAVPPQQQ-------GQPGEIRTLWIGDLQYWMDETYLNTCFAH-TGEVVAVK 112
P AAG+ PP G TLW+G+L+ WMDE ++ FA TGE V VK
Sbjct: 23 GTPVAAGMGYPPNANELTGPGNSPDGNKTTLWMGELEPWMDENFIKGVFATATGEQVNVK 82
Query: 113 VIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT 171
VIR+K +G GY F+EF S A + L NGTP+PN + F+LNWAS G ++RDD
Sbjct: 83 VIRDKSSGN-AGYCFVEFNSTDAASKAL-ALNGTPVPNSARMFKLNWASGGGINDRRDDR 140
Query: 172 -PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
P+ +IFVGDL +V +++L F+AR+PS K AK++ D +TG+++GYGFVRF DE +Q
Sbjct: 141 GPEFSIFVGDLGPEVNEFVLVSLFQARFPSCKSAKIMTDAVTGQSRGYGFVRFTDEQDQQ 200
Query: 231 RAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQ---------------------- 268
RA+ EM GV+C RPMRI AT K Y Q Q
Sbjct: 201 RALVEMQGVYCGNRPMRISTATPKNRNHGPYGAQQGHQMPPAMHPHQPQAFYGVPPGPQF 260
Query: 269 ----------------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 312
DPNNTTVFVG L VT++ LR F +G++ +VKIP GK
Sbjct: 261 NQGYGAAPQFQQQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKG 320
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
CGFVQF R AE A+ + G +G +RLSWGRS +N
Sbjct: 321 CGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNS 360
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 32/234 (13%)
Query: 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
D T+++G+L + + ++ F KV+ D+ +G GY FV F
Sbjct: 47 DGNKTTLWMGELEPWMDENFIKGVFATATGEQVNVKVIRDKSSGNA-GYCFVEFNSTDAA 105
Query: 230 LRAMTEMNG--VFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
+A+ +NG V S R ++ A+ + DD ++FVG+L V
Sbjct: 106 SKALA-LNGTPVPNSARMFKLNWASGGGIND---------RRDDRGPEFSIFVGDLGPEV 155
Query: 288 TDEHLRELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 340
+ L LF +++ KI + GFV+F D + AL + G G +
Sbjct: 156 NEFVLVSLFQARFPSCKSAKIMTDAVTGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRP 215
Query: 341 IRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPG 394
+R+S +P N+ N G YG QG++ A P P +YG PG
Sbjct: 216 MRISTA-TPKNR---------NHGPYGAQQGHQM--PPAMHPHQPQAFYGVPPG 257
>gi|380478379|emb|CCF43635.1| RNA recognition domain-containing protein, partial [Colletotrichum
higginsianum]
Length = 419
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 141/330 (42%), Positives = 185/330 (56%), Gaps = 48/330 (14%)
Query: 66 AGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQIEG 124
GV P QQ TLW+G+L+ WMDE ++ F TGE V VKVIR+K +G G
Sbjct: 46 GGVQAPNQQDANK---NTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDKTSGN-AG 101
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLA 182
Y F+EF S A + L NGTP+PN + F+LNWAS G ++RDD P+++IFVGDL
Sbjct: 102 YCFVEFSSSDAASKAL-GLNGTPVPNSNRAFKLNWASGGGINDRRDDRGPEYSIFVGDLG 160
Query: 183 ADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCS 242
+V +Y+L F+AR+PS K AK++ D ++G+++GYGFVRF DE +Q RA+ EM GV+C
Sbjct: 161 PEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQGVYCG 220
Query: 243 TRPMRIGPAT--NKKTVSASYQN------------------------------------- 263
RPMRI AT N+ YQ
Sbjct: 221 NRPMRISTATPKNRSNHGGPYQQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAYGAPYNP 280
Query: 264 -SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRS 322
Q DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R
Sbjct: 281 PGQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRH 340
Query: 323 CAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
AE A+ + G +G +RLSWGRS +N
Sbjct: 341 AAEMAINQMQGYPIGNSRVRLSWGRSQNNS 370
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 21/204 (10%)
Query: 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
D +T+++G+L + + ++ F KV+ D+ +G GY FV F
Sbjct: 55 DANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDKTSGNA-GYCFVEFSSSDAA 113
Query: 230 LRAMTEMNG--VFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
+A+ +NG V S R ++ A+ + DD ++FVG+L V
Sbjct: 114 SKALG-LNGTPVPNSNRAFKLNWASGGGIND---------RRDDRGPEYSIFVGDLGPEV 163
Query: 288 TDEHLRELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 340
+ L LF +++ KI + GFV+F D + AL + G G +
Sbjct: 164 NEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRP 223
Query: 341 IRLSWGRSPSNKQAQPDPNQWNAG 364
+R+S +P N+ P Q + G
Sbjct: 224 MRIST-ATPKNRSNHGGPYQQHHG 246
>gi|240280986|gb|EER44489.1| mRNA binding post-transcriptional regulator [Ajellomyces capsulatus
H143]
gi|325092520|gb|EGC45830.1| mRNA binding post-transcriptional regulator [Ajellomyces capsulatus
H88]
Length = 399
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/306 (42%), Positives = 182/306 (59%), Gaps = 31/306 (10%)
Query: 77 QPGEIRT-LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAG 135
Q GE +T LW+G+L+ W+DE ++ + GE V VK+IR+K +G GY F++F + A
Sbjct: 59 QAGEAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFTTPAA 118
Query: 136 AERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR---DDTPDHTIFVGDLAADVTDYMLQE 192
A + L T +GTP+PN + F+LNWAS G R + P+ +IFVGDL +V +Y+L
Sbjct: 119 AAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVS 177
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM GV+C RPMRI AT
Sbjct: 178 LFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTAT 237
Query: 253 NKKTVSAS--------------------------YQNSQVAQSDDDPNNTTVFVGNLDSI 286
K + + Y Q DPNNTTVFVG L
Sbjct: 238 PKNKGAGAGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGY 297
Query: 287 VTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 346
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWG
Sbjct: 298 VTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 357
Query: 347 RSPSNK 352
RS +N
Sbjct: 358 RSQNNS 363
>gi|322705595|gb|EFY97180.1| mRNA binding post-transcriptional regulator [Metarhizium anisopliae
ARSEF 23]
Length = 390
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/320 (42%), Positives = 185/320 (57%), Gaps = 38/320 (11%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQIEGYGF 127
AVPP G TLW+G+L+ WMDE ++ F + GE V VKVIR+K +G GY F
Sbjct: 15 AVPPPAGGPEQPKTTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSGN-AGYCF 73
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAADV 185
+EF + A + L NGTP+PN + F+LNWAS G ++RDD P+++IFVGDL +V
Sbjct: 74 VEFTTPEAATKAL-GLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEV 132
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
+Y+L F+AR+PS K AK++ D ++G+++GYGFVRF DE++Q RA+ EM GV+C RP
Sbjct: 133 NEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRP 192
Query: 246 MRIGPATNKKTVS---------------------------------ASYQNSQVAQSDDD 272
MRI AT K + Y + D
Sbjct: 193 MRISTATPKNRGNHGFGGPGHHAGGAPMMGGVPQQPMWGGMQGFPYGGYNPATQMNQFTD 252
Query: 273 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLN 332
PNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ +
Sbjct: 253 PNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQ 312
Query: 333 GTQLGGQNIRLSWGRSPSNK 352
G +G +RLSWGRS +N
Sbjct: 313 GYPIGNSRVRLSWGRSQNNS 332
>gi|322694638|gb|EFY86462.1| mRNA binding post-transcriptional regulator [Metarhizium acridum
CQMa 102]
Length = 384
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 138/326 (42%), Positives = 187/326 (57%), Gaps = 38/326 (11%)
Query: 63 PQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQ 121
P + AVPP G TLW+G+L+ WMDE ++ F + GE V VKVIR+K +G
Sbjct: 9 PASDMAAVPPPAGGPEQPKTTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSGN 68
Query: 122 IEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVG 179
GY F+EF + A + L NGTP+PN + F+LNWAS G ++RDD P+++IFVG
Sbjct: 69 -AGYCFVEFTTPEAATKAL-GLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVG 126
Query: 180 DLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV 239
DL +V +Y+L F+AR+PS K AK++ D ++G+++GYGFVRF DE++Q RA+ EM GV
Sbjct: 127 DLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGV 186
Query: 240 FCSTRPMRIGPATNKKTVS---------------------------------ASYQNSQV 266
+C RPMRI AT K + Y +
Sbjct: 187 YCGNRPMRISTATPKNRGNHGFGGPGHHAGGAPMMGGVPQQPMWGGMQGFPYGGYNPATQ 246
Query: 267 AQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEE 326
DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE
Sbjct: 247 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEM 306
Query: 327 ALRMLNGTQLGGQNIRLSWGRSPSNK 352
A+ + G +G +RLSWGRS +N
Sbjct: 307 AINQMQGYPIGNSRVRLSWGRSQNNS 332
>gi|261199113|ref|XP_002625958.1| mRNA binding post-transcriptional regulator [Ajellomyces
dermatitidis SLH14081]
gi|239595110|gb|EEQ77691.1| mRNA binding post-transcriptional regulator [Ajellomyces
dermatitidis SLH14081]
gi|327353834|gb|EGE82691.1| hypothetical protein BDDG_05635 [Ajellomyces dermatitidis ATCC
18188]
Length = 399
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/318 (42%), Positives = 186/318 (58%), Gaps = 32/318 (10%)
Query: 65 AAGVAVPPQQQGQPGEIRT-LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE 123
A+G P Q Q GE +T LW+G+L+ W+DE ++ + GE V VK+IR+K +G
Sbjct: 48 ASGEPAPSSAQ-QGGEAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNA 106
Query: 124 GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR---DDTPDHTIFVGD 180
GY F++F + A A + L T +GTP+PN + F+LNWAS G R + P+ +IFVGD
Sbjct: 107 GYCFVDFTTPAAAAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGD 165
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L +V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM GV+
Sbjct: 166 LGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVY 225
Query: 241 CSTRPMRIGPATNKKTVSAS--------------------------YQNSQVAQSDDDPN 274
C RPMRI AT K + Y Q DPN
Sbjct: 226 CGNRPMRISTATPKNKGPGAGPGAMGMPGAGPAGMYPPMGGPPMGYYGAPQPMNQFTDPN 285
Query: 275 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGT 334
NTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G
Sbjct: 286 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 345
Query: 335 QLGGQNIRLSWGRSPSNK 352
+G +RLSWGRS +N
Sbjct: 346 PIGNSRVRLSWGRSQNNS 363
>gi|317155988|ref|XP_001825498.2| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
oryzae RIB40]
Length = 404
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/311 (43%), Positives = 186/311 (59%), Gaps = 33/311 (10%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE-GYGFI 128
V P Q+G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G+ GY F+
Sbjct: 56 VQPAQEGK----TTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGRSNAGYCFV 111
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADV 185
+F S A A + L + NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL +V
Sbjct: 112 DFSSPAAAAKAL-SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEV 170
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
+Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA++EM GV+C RP
Sbjct: 171 NEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRP 230
Query: 246 MRIGPATNKKTVSAS------------------------YQNSQVAQSDDDPNNTTVFVG 281
MRI AT K Y Q DPNNTTVFVG
Sbjct: 231 MRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVG 290
Query: 282 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +
Sbjct: 291 GLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRV 350
Query: 342 RLSWGRSPSNK 352
RLSWGRS +N
Sbjct: 351 RLSWGRSQNNS 361
>gi|258576821|ref|XP_002542592.1| hypothetical protein UREG_02108 [Uncinocarpus reesii 1704]
gi|237902858|gb|EEP77259.1| hypothetical protein UREG_02108 [Uncinocarpus reesii 1704]
Length = 399
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/309 (43%), Positives = 183/309 (59%), Gaps = 33/309 (10%)
Query: 76 GQPGE--IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISR 133
GQPG TLW+G+L+ W+DE ++ + GE V VK+IR+K +G GY F++F +
Sbjct: 54 GQPGGEGKTTLWMGELEPWIDENFIRNIWYQMGEQVNVKMIRDKFSGSNAGYCFVDFATP 113
Query: 134 AGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR---DDTPDHTIFVGDLAADVTDYML 190
A A + L + NGTPMPN + F+LNWA+ G R D TP+++IFVGDL +V +Y+L
Sbjct: 114 AAAAKAL-SVNGTPMPNTNRPFKLNWATGGGLSDRNREDRTPEYSIFVGDLGPEVNEYVL 172
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM GV+C RPMRI
Sbjct: 173 VSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRIST 232
Query: 251 ATNKKTVSAS---------------------------YQNSQVAQSDDDPNNTTVFVGNL 283
AT K A Y Q DPNNTTVFVG L
Sbjct: 233 ATPKNKGPAGGPGQMGMPGAPPAGMYPPAMGGPPMGYYGTPQPMNQFTDPNNTTVFVGGL 292
Query: 284 DSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRL 343
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RL
Sbjct: 293 SGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRL 352
Query: 344 SWGRSPSNK 352
SWGRS +N
Sbjct: 353 SWGRSQNNS 361
>gi|85115744|ref|XP_964924.1| hypothetical protein NCU00768 [Neurospora crassa OR74A]
gi|28926722|gb|EAA35688.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38636412|emb|CAE81949.1| related to polyadenylate-binding protein [Neurospora crassa]
Length = 491
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/308 (42%), Positives = 180/308 (58%), Gaps = 39/308 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+TLW+G+++ WMDE ++ F GE V VKVIR++ +G GY FIEF + A++ L
Sbjct: 43 KTLWMGEMEGWMDENFIKNVFTTVLGETVQVKVIRDRNSGN-AGYCFIEFATPEAAQKAL 101
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAG-EKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
NGTP+PN + F+LNWAS G ++RDD P+++IFVGDL +V +++L F++R+
Sbjct: 102 N-LNGTPVPNSNRAFKLNWASGGGLIDRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRF 160
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS K AK++ D +TG+++GYGFVRF DE +Q RA+ EM GV+C RPMRI AT K
Sbjct: 161 PSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRPMRISTATPKTRTH 220
Query: 259 ----------------------------------ASYQNSQVAQSDDDPNNTTVFVGNLD 284
+ + Q DPNNTTVFVG L
Sbjct: 221 QYGAHAPHAANPMMAPVPAHATNLQWGVPPQPYYSGFNPMQPMNQFTDPNNTTVFVGGLS 280
Query: 285 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 344
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLS
Sbjct: 281 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLS 340
Query: 345 WGRSPSNK 352
WGRS +N
Sbjct: 341 WGRSQNNS 348
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 90/219 (41%), Gaps = 27/219 (12%)
Query: 135 GAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
G T NG N E NF+ A G + T+++G++ + + ++ F
Sbjct: 11 GTNNAAPTMNG----NSEANFQAPAALVQPGT---NEASKTLWMGEMEGWMDENFIKNVF 63
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG--VFCSTRPMRIGPAT 252
T KV+ DR +G GY F+ F +A+ +NG V S R ++ A+
Sbjct: 64 TTVLGETVQVKVIRDRNSGNA-GYCFIEFATPEAAQKAL-NLNGTPVPNSNRAFKLNWAS 121
Query: 253 NKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELF-SQYGQLVHVKIPA-- 309
+ + DD ++FVG+L V + L LF S++ KI
Sbjct: 122 GGGLID---------RRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRFPSCKSAKIMTDA 172
Query: 310 ----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 344
+ GFV+F+D + AL + G G + +R+S
Sbjct: 173 MTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRPMRIS 211
>gi|336463751|gb|EGO51991.1| hypothetical protein NEUTE1DRAFT_149626 [Neurospora tetrasperma
FGSC 2508]
Length = 491
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/308 (42%), Positives = 180/308 (58%), Gaps = 39/308 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+TLW+G+++ WMDE ++ F GE V VKVIR++ +G GY FIEF + A++ L
Sbjct: 43 KTLWMGEMEGWMDENFIKNVFTTVLGETVQVKVIRDRNSGN-AGYCFIEFATPEAAQKAL 101
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAG-EKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
NGTP+PN + F+LNWAS G ++RDD P+++IFVGDL +V +++L F++R+
Sbjct: 102 N-LNGTPVPNSNRAFKLNWASGGGLIDRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRF 160
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS K AK++ D +TG+++GYGFVRF DE +Q RA+ EM GV+C RPMRI AT K
Sbjct: 161 PSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRPMRISTATPKTRTH 220
Query: 259 ----------------------------------ASYQNSQVAQSDDDPNNTTVFVGNLD 284
+ + Q DPNNTTVFVG L
Sbjct: 221 QYGAHAPHAANPMMAPVPAHATNLQWGVPPQPYYSGFNPMQPMNQFTDPNNTTVFVGGLS 280
Query: 285 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 344
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLS
Sbjct: 281 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLS 340
Query: 345 WGRSPSNK 352
WGRS +N
Sbjct: 341 WGRSQNNS 348
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 90/219 (41%), Gaps = 27/219 (12%)
Query: 135 GAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
G T NG N E NF+ A G + T+++G++ + + ++ F
Sbjct: 11 GTNNAAPTMNG----NSEANFQAPAALVQPG---TNEASKTLWMGEMEGWMDENFIKNVF 63
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG--VFCSTRPMRIGPAT 252
T KV+ DR +G GY F+ F +A+ +NG V S R ++ A+
Sbjct: 64 TTVLGETVQVKVIRDRNSGNA-GYCFIEFATPEAAQKAL-NLNGTPVPNSNRAFKLNWAS 121
Query: 253 NKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELF-SQYGQLVHVKIPA-- 309
+ + DD ++FVG+L V + L LF S++ KI
Sbjct: 122 GGGLID---------RRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRFPSCKSAKIMTDA 172
Query: 310 ----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 344
+ GFV+F+D + AL + G G + +R+S
Sbjct: 173 MTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRPMRIS 211
>gi|348670884|gb|EGZ10705.1| hypothetical protein PHYSODRAFT_520170 [Phytophthora sojae]
Length = 390
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 126/260 (48%), Positives = 175/260 (67%), Gaps = 7/260 (2%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E +TLW+GD+Q DET++++ FA GE VK+IR+K TG GYGF+EF ++ GA++V
Sbjct: 4 ECKTLWMGDIQMHWDETFISSLFASAGEQPVVKLIRDKVTGYPAGYGFLEFPTQRGAQQV 63
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPD-HTIFVGDLAADVTDYMLQETFRARY 198
L T+NG +PN FR+NW GAG +R +T D H+IFVGDLA DVTD +L TF +R+
Sbjct: 64 LDTYNGQVIPNTMHRFRMNW---GAGGRRIETSDDHSIFVGDLAPDVTDELLLSTFNSRF 120
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S +GAKVV+D +T +KG+GFVRFG + E +A+ MNGV+CS+RPMR+ AT + S
Sbjct: 121 TSVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRVSVATER---S 177
Query: 259 ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQF 318
S Q +++ NTTVFVG LD T++ LR F G++V VK+P G+ CGFVQ+
Sbjct: 178 KSRQQGAFGAPEEEGTNTTVFVGGLDPSTTEDELRARFGALGEIVSVKVPPGRGCGFVQY 237
Query: 319 ADRSCAEEALRMLNGTQLGG 338
+ AE A+ +NGT + G
Sbjct: 238 TSKEAAEVAITQMNGTVISG 257
>gi|226292803|gb|EEH48223.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides brasiliensis Pb18]
Length = 400
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 134/321 (41%), Positives = 184/321 (57%), Gaps = 32/321 (9%)
Query: 62 APQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQ 121
P + A QQG + TLW+G+L+ W+DE ++ + GE V VK+IR+K +G
Sbjct: 46 GPASGEAASGSAQQGGDAKT-TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGS 104
Query: 122 IEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR---DDTPDHTIFV 178
GY F++F S A A + L T +GTP+PN + F+LNWAS G R + P+ +IFV
Sbjct: 105 NAGYCFVDFSSPAAAAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFV 163
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDL +V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM G
Sbjct: 164 GDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQG 223
Query: 239 VFCSTRPMRIGPATNKKTVSAS---------------------------YQNSQVAQSDD 271
V+C RPMRI AT K + Y Q
Sbjct: 224 VYCGNRPMRISTATPKNKGPGAGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQPMNQFT 283
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ +
Sbjct: 284 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 343
Query: 332 NGTQLGGQNIRLSWGRSPSNK 352
G +G +RLSWGRS +N
Sbjct: 344 QGYPIGNSRVRLSWGRSQNNS 364
>gi|225680559|gb|EEH18843.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 400
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 134/321 (41%), Positives = 184/321 (57%), Gaps = 32/321 (9%)
Query: 62 APQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQ 121
P + A QQG + TLW+G+L+ W+DE ++ + GE V VK+IR+K +G
Sbjct: 46 GPASGEAASGSAQQGGDAKT-TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGS 104
Query: 122 IEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR---DDTPDHTIFV 178
GY F++F S A A + L T +GTP+PN + F+LNWAS G R + P+ +IFV
Sbjct: 105 NAGYCFVDFSSPAAAAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFV 163
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDL +V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM G
Sbjct: 164 GDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQG 223
Query: 239 VFCSTRPMRIGPATNKKTVSAS---------------------------YQNSQVAQSDD 271
V+C RPMRI AT K + Y Q
Sbjct: 224 VYCGNRPMRISTATPKNKGPGAGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQPMNQFT 283
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ +
Sbjct: 284 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 343
Query: 332 NGTQLGGQNIRLSWGRSPSNK 352
G +G +RLSWGRS +N
Sbjct: 344 QGYPIGNSRVRLSWGRSQNNS 364
>gi|350295821|gb|EGZ76798.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 523
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 130/308 (42%), Positives = 180/308 (58%), Gaps = 39/308 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+TLW+G+++ WMDE ++ F GE V VKVIR++ +G GY FIEF + A++ L
Sbjct: 75 KTLWMGEMEGWMDENFIKNVFTTVLGETVQVKVIRDRNSGN-AGYCFIEFATPEAAQKAL 133
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAG-EKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
NGTP+PN + F+LNWAS G ++RDD P+++IFVGDL +V +++L F++R+
Sbjct: 134 N-LNGTPVPNSNRAFKLNWASGGGLIDRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRF 192
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS K AK++ D +TG+++GYGFVRF DE +Q RA+ EM GV+C RPMRI AT K
Sbjct: 193 PSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRPMRISTATPKTRTH 252
Query: 259 ----------------------------------ASYQNSQVAQSDDDPNNTTVFVGNLD 284
+ + Q DPNNTTVFVG L
Sbjct: 253 QYGAHAPHAANPMMAPVPAHATNLQWGVPPQPYYSGFNPMQPMNQFTDPNNTTVFVGGLS 312
Query: 285 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 344
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLS
Sbjct: 313 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLS 372
Query: 345 WGRSPSNK 352
WGRS +N
Sbjct: 373 WGRSQNNS 380
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 90/219 (41%), Gaps = 27/219 (12%)
Query: 135 GAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
G T NG N E NF+ A G + T+++G++ + + ++ F
Sbjct: 43 GTNNAAPTMNG----NSEANFQAPAALVQPG---TNEASKTLWMGEMEGWMDENFIKNVF 95
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG--VFCSTRPMRIGPAT 252
T KV+ DR +G GY F+ F +A+ +NG V S R ++ A+
Sbjct: 96 TTVLGETVQVKVIRDRNSG-NAGYCFIEFATPEAAQKAL-NLNGTPVPNSNRAFKLNWAS 153
Query: 253 NKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELF-SQYGQLVHVKIPA-- 309
+ + DD ++FVG+L V + L LF S++ KI
Sbjct: 154 GGGLID---------RRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRFPSCKSAKIMTDA 204
Query: 310 ----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 344
+ GFV+F+D + AL + G G + +R+S
Sbjct: 205 MTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRPMRIS 243
>gi|310798962|gb|EFQ33855.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 419
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 136/313 (43%), Positives = 181/313 (57%), Gaps = 45/313 (14%)
Query: 83 TLWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
TLW+G+L+ WMDE ++ F TGE V VKVIR+K +G GY F+EF S A + L
Sbjct: 60 TLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDKTSGN-AGYCFVEFTSSEAASKAL- 117
Query: 142 TFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYP 199
T NG+P+PN + F+LNWAS G ++RDD P+++IFVGDL +V +Y+L F+AR+P
Sbjct: 118 TLNGSPVPNSNRAFKLNWASGGGINDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 177
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK-KTVS 258
S K AK++ D ++G+++GYGFVRF DE +Q RA+ EM GV+C RPMRI AT K +
Sbjct: 178 SCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRPMRISTATPKNRNHG 237
Query: 259 ASYQN---------------------------------------SQVAQSDDDPNNTTVF 279
YQ Q DPNNTTVF
Sbjct: 238 GPYQQQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAYGAPYNPPGQQMNQFTDPNNTTVF 297
Query: 280 VGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQ 339
VG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G
Sbjct: 298 VGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNS 357
Query: 340 NIRLSWGRSPSNK 352
+RLSWGRS +N
Sbjct: 358 RVRLSWGRSQNNS 370
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 99/239 (41%), Gaps = 36/239 (15%)
Query: 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
D +T+++G+L + + ++ F KV+ D+ +G GY FV F
Sbjct: 55 DANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDKTSGNA-GYCFVEFTSSEAA 113
Query: 230 LRAMTEMNG--VFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
+A+T +NG V S R ++ A+ + DD ++FVG+L V
Sbjct: 114 SKALT-LNGSPVPNSNRAFKLNWASGGGIND---------RRDDRGPEYSIFVGDLGPEV 163
Query: 288 TDEHLRELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 340
+ L LF +++ KI + GFV+F D + AL + G G +
Sbjct: 164 NEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRP 223
Query: 341 IRLSWGRSPSNK------QAQPDPNQWNA--------GYYGYAQGYENYGYAAAAPQDP 385
+R+S +P N+ Q Q NQ A G+YG + YG A AP +P
Sbjct: 224 MRISTA-TPKNRNHGGPYQQQHHGNQMMAPGLPPHQQGFYGVPSPAQ-YGGAYGAPYNP 280
>gi|295661580|ref|XP_002791345.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226280907|gb|EEH36473.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 400
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 138/330 (41%), Positives = 190/330 (57%), Gaps = 36/330 (10%)
Query: 53 PAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
PA + A+ A+G A QQG + TLW+G+L+ W+DE ++ + GE V VK
Sbjct: 41 PAPFQGPASGEAASGSA----QQGGDAKT-TLWMGELEPWIDENFIRNLWFQMGEQVNVK 95
Query: 113 VIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR---D 169
+IR+K +G GY F++F S A A + L T +GTP+PN + F+LNWAS G R +
Sbjct: 96 MIRDKFSGSNAGYCFVDFSSPAAAAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRSREE 154
Query: 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
P+ +IFVGDL +V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q
Sbjct: 155 RGPEFSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQ 214
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKKTVSAS---------------------------YQ 262
RA+TEM GV+C RPMRI AT K + Y
Sbjct: 215 QRALTEMQGVYCGNRPMRISTATPKNKGPGAGPGGAMGMPGAGPAGMYPPMGGPPMGYYG 274
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRS 322
Q DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R
Sbjct: 275 APQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRH 334
Query: 323 CAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
AE A+ + G +G +RLSWGRS +N
Sbjct: 335 AAEMAINQMQGYPIGNSRVRLSWGRSQNNS 364
>gi|320587473|gb|EFW99953.1| mRNA-binding post-transcriptional regulator [Grosmannia clavigera
kw1407]
Length = 399
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 135/313 (43%), Positives = 185/313 (59%), Gaps = 45/313 (14%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAH-TGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+TLW+G+L+ WMDE ++ F+ +GE V VKVIR++ +G GY F+EF + A + L
Sbjct: 42 KTLWMGELEPWMDENFVKNVFSTVSGEAVNVKVIRDRASGN-AGYCFVEFNTADAATKAL 100
Query: 141 QTFNGTPMPNGEQNFRLNWASFGA-GEKRDD-TPDHTIFVGDLAADVTDYMLQETFRARY 198
T NG+P+PN + F+LNWAS G ++RDD +P+ +IFVGDL +V +++L F+AR+
Sbjct: 101 -TLNGSPVPNSTRAFKLNWASGGGLVDRRDDRSPEFSIFVGDLGPEVNEFVLVSLFQARF 159
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS K AK++ D +TG+++GYGFVRF DE++Q RA+ EM GV+C RPMRI AT KT S
Sbjct: 160 PSCKSAKIMTDAVTGQSRGYGFVRFSDETDQQRALVEMQGVYCGNRPMRISTAT-PKTRS 218
Query: 259 ASYQNSQVAQSD---------------------------------------DDPNNTTVF 279
Y Q Q DPNNTTVF
Sbjct: 219 HQYGQGQHGQHMPAHGPAQGNMGWGGMGNGGNGGYYQPGFGPMAPQPMNQFTDPNNTTVF 278
Query: 280 VGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQ 339
VG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G
Sbjct: 279 VGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNS 338
Query: 340 NIRLSWGRSPSNK 352
+RLSWGRS +N
Sbjct: 339 RVRLSWGRSQNNS 351
>gi|400600479|gb|EJP68153.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 410
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 135/318 (42%), Positives = 184/318 (57%), Gaps = 36/318 (11%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQIEGYGF 127
A PP Q TLW+G+L+ WMDE ++ F + +GE V VKVIR+K +G GY F
Sbjct: 35 APPPTGSSQDQAKTTLWMGELEPWMDENFIKGVFLSASGETVNVKVIRDKNSGN-AGYCF 93
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAADV 185
+EF + A + L NG P+PN + F+LNWAS G ++RDD P+++IFVGDL +V
Sbjct: 94 VEFQTADAATKAL-GLNGNPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEV 152
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
+Y+L F+AR+PS K AK++ D ++G+++GYGFVRF DE++Q RA+ EM GV+C RP
Sbjct: 153 NEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRP 212
Query: 246 MRIGPATNKKTVS-------------------------------ASYQNSQVAQSDDDPN 274
MRI AT K + Y + DPN
Sbjct: 213 MRISTATPKNRGNHGFGHGPHGGPMMGGGMPQQPMWNGMQGFAYGGYNPATQMNQFTDPN 272
Query: 275 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGT 334
NTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G
Sbjct: 273 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGY 332
Query: 335 QLGGQNIRLSWGRSPSNK 352
+G +RLSWGRS +N
Sbjct: 333 PIGNSRVRLSWGRSQNNS 350
>gi|336275731|ref|XP_003352619.1| hypothetical protein SMAC_01453 [Sordaria macrospora k-hell]
gi|380094509|emb|CCC07889.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 517
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/308 (42%), Positives = 180/308 (58%), Gaps = 39/308 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+TLW+G+++ WMDE ++ F GE V VKVIR++ +G GY FIEF S A++ L
Sbjct: 43 KTLWMGEMEGWMDENFIKNVFTTVLGENVQVKVIRDRNSGN-AGYCFIEFASAEAAQKAL 101
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAG-EKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
NGTP+PN + F+LNWAS G ++RDD P+++IFVGDL +V +++L F++R+
Sbjct: 102 N-LNGTPVPNSNRAFKLNWASGGGLIDRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRF 160
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS K AK++ D +TG+++GYGFVRF DE +Q RA+ EM GV+C RPMRI AT K
Sbjct: 161 PSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRPMRISTATPKTRTH 220
Query: 259 ----------------------------------ASYQNSQVAQSDDDPNNTTVFVGNLD 284
+ + Q DPNNTTVFVG L
Sbjct: 221 QYGAHAPHAANAMMAPVPAHAANMQWGVPPQPYYSGFNPMQPMNQFTDPNNTTVFVGGLS 280
Query: 285 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 344
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLS
Sbjct: 281 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLS 340
Query: 345 WGRSPSNK 352
WGRS +N
Sbjct: 341 WGRSQNNS 348
>gi|121709146|ref|XP_001272322.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus clavatus NRRL 1]
gi|119400471|gb|EAW10896.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus clavatus NRRL 1]
Length = 417
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/311 (44%), Positives = 184/311 (59%), Gaps = 29/311 (9%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
A P QQG G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G GY F+
Sbjct: 54 AAPVSQQGSDGKT-TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFV 112
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADV 185
+F S A A + L NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL +V
Sbjct: 113 DFASPAAAAKALSL-NGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEV 171
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
+Y+L F+ R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM GV+C RP
Sbjct: 172 NEYVLVSLFQNRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRP 231
Query: 246 MRIGPATNKKTVSAS------------------------YQNSQVAQSDDDPNNTTVFVG 281
MRI AT K Y Q DPNNTTVFVG
Sbjct: 232 MRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVG 291
Query: 282 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +
Sbjct: 292 GLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRV 351
Query: 342 RLSWGRSPSNK 352
RLSWGRS +N
Sbjct: 352 RLSWGRSQNNS 362
>gi|238498926|ref|XP_002380698.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus flavus NRRL3357]
gi|220693972|gb|EED50317.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus flavus NRRL3357]
Length = 427
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 131/308 (42%), Positives = 181/308 (58%), Gaps = 34/308 (11%)
Query: 78 PGEIRTLWI------GDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
P + T+W+ G+L+ W+DE ++ + GE V VK+IR+K +G GY F++F
Sbjct: 78 PSWLGTIWLTVNVRMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFS 137
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADVTDY 188
S A A + L + NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL +V +Y
Sbjct: 138 SPAAAAKAL-SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEY 196
Query: 189 MLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248
+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA++EM GV+C RPMRI
Sbjct: 197 VLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRI 256
Query: 249 GPATNKKTVSAS------------------------YQNSQVAQSDDDPNNTTVFVGNLD 284
AT K Y Q DPNNTTVFVG L
Sbjct: 257 STATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLS 316
Query: 285 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 344
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLS
Sbjct: 317 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLS 376
Query: 345 WGRSPSNK 352
WGRS +N
Sbjct: 377 WGRSQNNS 384
>gi|367053249|ref|XP_003657003.1| hypothetical protein THITE_2132116 [Thielavia terrestris NRRL 8126]
gi|347004268|gb|AEO70667.1| hypothetical protein THITE_2132116 [Thielavia terrestris NRRL 8126]
Length = 396
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 138/326 (42%), Positives = 189/326 (57%), Gaps = 44/326 (13%)
Query: 66 AGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEG 124
AG + Q +TLW+G+++ WMDE ++ F V V VKVIR++ +G G
Sbjct: 25 AGFSATSQMSASNEAAKTLWMGEMEGWMDENFIKNVFQTVLSVDVQVKVIRDRNSGN-AG 83
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLA 182
Y FIEF + A++ L T NGTP+PN + F+LNWAS G ++RDD P+++IFVGDL
Sbjct: 84 YCFIEFPTPDAAQKAL-TLNGTPVPNSSRVFKLNWASGGGLVDRRDDRGPEYSIFVGDLG 142
Query: 183 ADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCS 242
+V +++L F++R+PS K AK++ D +TG+++GYGFVRF DESEQ RA+ EM GV+C
Sbjct: 143 PEVNEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDESEQQRALVEMQGVYCG 202
Query: 243 TRPMRIGPATNKKTVSASYQ----------------------------------NSQVAQ 268
R MRI AT K S S+Q N +A
Sbjct: 203 NRAMRISTATPK---SRSHQFGHHGHGATQMMPPIAGHPGPMWGVPSYYGQQPFNQHIAP 259
Query: 269 SD--DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEE 326
+ DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE
Sbjct: 260 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEM 319
Query: 327 ALRMLNGTQLGGQNIRLSWGRSPSNK 352
A+ + G +G +RLSWGRS +N
Sbjct: 320 AINQMQGYPIGNSRVRLSWGRSQNNS 345
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 28/204 (13%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++G++ + + ++ F+ KV+ DR +G GY F+ F +A+T
Sbjct: 42 TLWMGEMEGWMDENFIKNVFQTVLSVDVQVKVIRDRNSGNA-GYCFIEFPTPDAAQKALT 100
Query: 235 EMNG--VFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 292
+NG V S+R ++ A+ V + DD ++FVG+L V + L
Sbjct: 101 -LNGTPVPNSSRVFKLNWASGGGLVD---------RRDDRGPEYSIFVGDLGPEVNEFVL 150
Query: 293 RELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 345
LF S++ KI + GFV+F+D S + AL + G G + +R+S
Sbjct: 151 VSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDESEQQRALVEMQGVYCGNRAMRIS- 209
Query: 346 GRSPSNKQAQPDPNQWNAGYYGYA 369
A P G++G+
Sbjct: 210 -------TATPKSRSHQFGHHGHG 226
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 64/162 (39%), Gaps = 25/162 (15%)
Query: 14 PPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQ 73
P +HQ+ + Q PP P M P Q P Q AP
Sbjct: 213 PKSRSHQFGHHGHGATQMMPPIAGHPGPMWGVPSYYGQQPF---NQHIAPM--------N 261
Query: 74 QQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISR 133
Q P T+++G L ++ E L + F GE+ VK+ K G GF++F+ R
Sbjct: 262 QFTDPNNT-TVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVHR 314
Query: 134 AGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT 175
AE + G P+ G RL+W G ++++ HT
Sbjct: 315 HAAEMAINQMQGYPI--GNSRVRLSW-----GRSQNNSGVHT 349
>gi|119489215|ref|XP_001262859.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Neosartorya fischeri NRRL 181]
gi|119411017|gb|EAW20962.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Neosartorya fischeri NRRL 181]
Length = 417
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 138/311 (44%), Positives = 184/311 (59%), Gaps = 29/311 (9%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
A P QQG G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G GY F+
Sbjct: 54 AAPVAQQGNEGKT-TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFV 112
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADV 185
+F S A A + L NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL +V
Sbjct: 113 DFASPAAAAKALSL-NGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEV 171
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
+Y+L F+ R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM GV+C RP
Sbjct: 172 NEYVLVSLFQNRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRP 231
Query: 246 MRIGPATNKKTVSAS------------------------YQNSQVAQSDDDPNNTTVFVG 281
MRI AT K Y Q DPNNTTVFVG
Sbjct: 232 MRISTATPKNKGPGVVPGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVG 291
Query: 282 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +
Sbjct: 292 GLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRV 351
Query: 342 RLSWGRSPSNK 352
RLSWGRS +N
Sbjct: 352 RLSWGRSQNNS 362
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 8/109 (7%)
Query: 52 PPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAV 111
P M+ A P A P Q T+++G L ++ E L + F GE+ V
Sbjct: 256 PAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYV 315
Query: 112 KVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160
K+ K G GF++F+ R AE + G P+ G RL+W
Sbjct: 316 KIPPGK------GCGFVQFVQRHAAEMAINQMQGYPI--GNSRVRLSWG 356
>gi|42571787|ref|NP_973984.1| RNA-binding protein 47C [Arabidopsis thaliana]
gi|332194052|gb|AEE32173.1| RNA-binding protein 47C [Arabidopsis thaliana]
Length = 310
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 154/217 (70%), Gaps = 9/217 (4%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE--VVAVKVIRNKQTGQIEGYGFIEF 130
Q GE +T+W+GDL +WMDE YLN+ FA E +V+VKVIRNK G EGYGF+EF
Sbjct: 92 HQNAFNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEF 151
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVTDY 188
S A++VL+ FNGT MPN +Q FRLNWASF GEKR ++ PD +IFVGDL+ DV+D
Sbjct: 152 ESHDVADKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDN 211
Query: 189 MLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248
+L ETF +YPS K AKVV+D TGR+KGYGFVRFGDE+E+ +AMTEMNGV CS+R MRI
Sbjct: 212 LLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRI 271
Query: 249 GPATNKKTVSASYQ-----NSQVAQSDDDPNNTTVFV 280
GPAT +KT Q N + + + D NTTV V
Sbjct: 272 GPATPRKTNGYQQQGGYMPNGTLTRPEGDIMNTTVIV 308
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 19/179 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRA-RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
TI+VGDL + + L +F + KV+ ++ G ++GYGFV F + +
Sbjct: 102 TIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVL 161
Query: 234 TEMNGVFC--STRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEH 291
E NG + +P R+ AS+ + ++ P+ ++FVG+L V+D
Sbjct: 162 REFNGTTMPNTDQPFRLN--------WASFSTGEKRLENNGPD-LSIFVGDLSPDVSDNL 212
Query: 292 LRELFSQ-YGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRL 343
L E FS+ Y + K+ K GFV+F D + +A+ +NG + + +R+
Sbjct: 213 LHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRI 271
>gi|340521165|gb|EGR51400.1| RNA-binding protein [Trichoderma reesei QM6a]
Length = 441
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 144/374 (38%), Positives = 201/374 (53%), Gaps = 52/374 (13%)
Query: 29 PQQQPPPQPSPYMMMMPPQP-----QAQPPAMWATQAAAPQAAGVAV--PPQQQGQPGEI 81
P++ P P ++ P P Q + + Q P A ++V PP Q
Sbjct: 8 PEEASQLTPRPLHLLNSPFPGPDANQTSGSSPMSYQNGTPPATDMSVVPPPTGPTQDQAK 67
Query: 82 RTLWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
TLW+G+L+ WMDE ++ F + GE V VKVIR+K +G GY F+EF + A + L
Sbjct: 68 TTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSGN-AGYCFVEFATPDAATKAL 126
Query: 141 QTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
NGTP+PN + F+LNWAS G ++RDD P+++IFVGDL +V +Y+L F+AR+
Sbjct: 127 -GLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARF 185
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK--- 255
PS K AK++ D ++G+++GYGFVRF DE++Q RA+ EM GV+C RPMRI AT K
Sbjct: 186 PSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGN 245
Query: 256 -------------------------------------TVSASYQNSQVAQSDDDPNNTTV 278
++ + DPNNTTV
Sbjct: 246 HGFGHGHQGGPMMGGGMPQQQMWGGVQAFPYGGGGAAAAGGNFNPATQMNQFTDPNNTTV 305
Query: 279 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 338
FVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G
Sbjct: 306 FVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGN 365
Query: 339 QNIRLSWGRSPSNK 352
+RLSWGRS +N
Sbjct: 366 SRVRLSWGRSQNNS 379
>gi|389643224|ref|XP_003719244.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae 70-15]
gi|351639013|gb|EHA46877.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae 70-15]
gi|440462667|gb|ELQ32668.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae Y34]
gi|440489843|gb|ELQ69456.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae P131]
Length = 415
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 133/316 (42%), Positives = 179/316 (56%), Gaps = 47/316 (14%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+TLW+G+L+ WMDE ++ ++ GE V VKVIR++Q+G GY F+EF S A + L
Sbjct: 47 KTLWMGELEPWMDENFIKQIWSTVCGETVNVKVIRDRQSGN-AGYCFVEFPSSEAATKAL 105
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDT--PDHTIFVGDLAADVTDYMLQETFRARY 198
NG+P+PN ++ F+LNWAS G R D P+++IFVGDL +V +++L F+AR+
Sbjct: 106 -GLNGSPVPNSQRVFKLNWASGGGLVDRRDERGPEYSIFVGDLGPEVNEFVLVSLFQARF 164
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS K AK++ D +TG+++GYGFVRF DES+Q RA+ EM GV+C RPMRI AT K
Sbjct: 165 PSCKSAKIMTDAMTGQSRGYGFVRFTDESDQQRALVEMQGVYCGNRPMRISTATPKTRSH 224
Query: 259 ASYQNS------------------------------------------QVAQSDDDPNNT 276
Y N Q DPNNT
Sbjct: 225 QQYGNQGPHGAGPMNMTPPAQNMQWGMNPYGYQQPQAPPPNTAFNNPMQPMNQFTDPNNT 284
Query: 277 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQL 336
TVFVG L VT++ LR F +G + +VKIP GK CGFVQF R AE A+ + G +
Sbjct: 285 TVFVGGLSGYVTEDELRSFFQGFGDITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPI 344
Query: 337 GGQNIRLSWGRSPSNK 352
G +RLSWGRS +N
Sbjct: 345 GNSRVRLSWGRSQNNS 360
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 100/239 (41%), Gaps = 33/239 (13%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++G+L + + +++ + T KV+ DR +G GY FV F +A+
Sbjct: 48 TLWMGELEPWMDENFIKQIWSTVCGETVNVKVIRDRQSGNA-GYCFVEFPSSEAATKALG 106
Query: 235 EMNG--VFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 292
+NG V S R ++ A+ V + D+ ++FVG+L V + L
Sbjct: 107 -LNGSPVPNSQRVFKLNWASGGGLVD---------RRDERGPEYSIFVGDLGPEVNEFVL 156
Query: 293 RELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 345
LF +++ KI + GFV+F D S + AL + G G + +R+S
Sbjct: 157 VSLFQARFPSCKSAKIMTDAMTGQSRGYGFVRFTDESDQQRALVEMQGVYCGNRPMRIST 216
Query: 346 GRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQP 404
+ Q YG QG G P +M +G P YG YQQPQ P
Sbjct: 217 ATPKTRSHQQ----------YG-NQGPHGAGPMNMTPPAQNMQWGMNP-YG-YQQPQAP 262
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 62/154 (40%), Gaps = 25/154 (16%)
Query: 14 PPMAAHQYQYQQQAP----PQQQPPPQPSPYMMMMP---PQPQAQPPAMWATQAAAPQAA 66
P +HQ QY Q P P PP + M P QPQA PP A
Sbjct: 219 PKTRSHQ-QYGNQGPHGAGPMNMTPPAQNMQWGMNPYGYQQPQAPPPNT---------AF 268
Query: 67 GVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYG 126
+ P Q T+++G L ++ E L + F G++ VK+ K G G
Sbjct: 269 NNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGDITYVKIPPGK------GCG 322
Query: 127 FIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160
F++F+ R AE + G P+ G RL+W
Sbjct: 323 FVQFVHRHAAEMAINQMQGYPI--GNSRVRLSWG 354
>gi|367019444|ref|XP_003659007.1| hypothetical protein MYCTH_2087998 [Myceliophthora thermophila ATCC
42464]
gi|347006274|gb|AEO53762.1| hypothetical protein MYCTH_2087998 [Myceliophthora thermophila ATCC
42464]
Length = 396
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 130/308 (42%), Positives = 182/308 (59%), Gaps = 39/308 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+TLW+G+++ WMDE ++ F E V VKVIR++ +G GY FIEF + A++ L
Sbjct: 40 KTLWMGEMEGWMDENFIKNVFQTVLAENVQVKVIRDRHSGN-AGYCFIEFGTPEAAQKAL 98
Query: 141 QTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
+ NGTP+PN + F+LNWAS G ++RDD P+++IFVGDL +V +++L F++R+
Sbjct: 99 -SLNGTPVPNSTRVFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRF 157
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV- 257
PS K AK++ D +TG+++GYGFVRF DE++Q RA+ EM GV+C RPMRI AT K
Sbjct: 158 PSCKSAKIMTDAMTGQSRGYGFVRFSDEADQQRALVEMQGVYCGNRPMRISTATPKTRSH 217
Query: 258 ---------------------------------SASYQNSQVAQSDDDPNNTTVFVGNLD 284
A++ Q DPNNTTVFVG L
Sbjct: 218 QYGGAHGQGANPMIPPVPGHPGPMWGAPAYYGQGAAFNPMQPMNQFTDPNNTTVFVGGLS 277
Query: 285 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 344
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLS
Sbjct: 278 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLS 337
Query: 345 WGRSPSNK 352
WGRS +N
Sbjct: 338 WGRSQNNS 345
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 43 MMPPQPQAQPPAMWATQAAAPQAAGVA-VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTC 101
M+PP P P MW A Q A + P Q T+++G L ++ E L +
Sbjct: 230 MIPPVP-GHPGPMWGAPAYYGQGAAFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSF 288
Query: 102 FAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160
F GE+ VK+ K G GF++F+ R AE + G P+ G RL+W
Sbjct: 289 FQGFGEITYVKIPPGK------GCGFVQFVHRHAAEMAINQMQGYPI--GNSRVRLSWG 339
>gi|134079837|emb|CAK40970.1| unnamed protein product [Aspergillus niger]
Length = 402
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/313 (43%), Positives = 188/313 (60%), Gaps = 30/313 (9%)
Query: 68 VAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGF 127
A P QQ G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G GY F
Sbjct: 53 TAAPVPQQANEGKT-TLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGSNAGYCF 111
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAAD 184
++F S A A + L NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL +
Sbjct: 112 VDFASPAAAAKALSL-NGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPE 170
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA++EM GV+C R
Sbjct: 171 VNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNR 230
Query: 245 PMRIGPATNKK---TVSAS----------------------YQNSQVAQSDDDPNNTTVF 279
PMRI AT K ++ A+ Y Q DPNNTTVF
Sbjct: 231 PMRISTATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVF 290
Query: 280 VGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQ 339
VG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G
Sbjct: 291 VGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNS 350
Query: 340 NIRLSWGRSPSNK 352
+RLSWGRS +N
Sbjct: 351 RVRLSWGRSQNNS 363
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 13/134 (9%)
Query: 27 APPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWI 86
A P+ + P + M MP P M+ A P A P Q T+++
Sbjct: 237 ATPKNKGPSLGAAGAMGMP-----GPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFV 291
Query: 87 GDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGT 146
G L ++ E L + F GE+ VK+ K G GF++F+ R AE + G
Sbjct: 292 GGLSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVQRHAAEMAINQMQGY 345
Query: 147 PMPNGEQNFRLNWA 160
P+ G RL+W
Sbjct: 346 PI--GNSRVRLSWG 357
>gi|358374531|dbj|GAA91122.1| mRNA binding post-transcriptional regulator [Aspergillus kawachii
IFO 4308]
Length = 402
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 188/312 (60%), Gaps = 30/312 (9%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
A P QQ G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G GY F+
Sbjct: 54 AAPVPQQANEGKT-TLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGSNAGYCFV 112
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADV 185
+F S A A + L NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL +V
Sbjct: 113 DFASPAAAAKALSL-NGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEV 171
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
+Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA++EM GV+C RP
Sbjct: 172 NEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRP 231
Query: 246 MRIGPATNKK---TVSAS----------------------YQNSQVAQSDDDPNNTTVFV 280
MRI AT K ++ A+ Y Q DPNNTTVFV
Sbjct: 232 MRISTATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFV 291
Query: 281 GNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQN 340
G L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G
Sbjct: 292 GGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSR 351
Query: 341 IRLSWGRSPSNK 352
+RLSWGRS +N
Sbjct: 352 VRLSWGRSQNNS 363
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 13/134 (9%)
Query: 27 APPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWI 86
A P+ + P + M MP P M+ A P A P Q T+++
Sbjct: 237 ATPKNKGPSLGAAGAMGMP-----GPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFV 291
Query: 87 GDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGT 146
G L ++ E L + F GE+ VK+ K G GF++F+ R AE + G
Sbjct: 292 GGLSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVQRHAAEMAINQMQGY 345
Query: 147 PMPNGEQNFRLNWA 160
P+ G RL+W
Sbjct: 346 PI--GNSRVRLSWG 357
>gi|340924065|gb|EGS18968.1| hypothetical protein CTHT_0055850 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 393
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 130/307 (42%), Positives = 181/307 (58%), Gaps = 38/307 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+TLW+G+++ WMDET++ F GE V VKVIR++ +G GY F+EF + A++ L
Sbjct: 41 KTLWMGEMEGWMDETFIKNVFQTVMGESVQVKVIRDRNSGN-AGYCFVEFQTPEAAQKAL 99
Query: 141 QTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
NGTP+PN + F+LNWAS G ++RDD P+++IFVGDL +V +++L F++R+
Sbjct: 100 -GLNGTPVPNSNRVFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRF 158
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS K AK++ D +TG+++GYGFVRF DE++ RA+ EM GV+C RPMRI AT K+
Sbjct: 159 PSCKSAKIMTDAMTGQSRGYGFVRFSDEADMQRALVEMQGVYCGNRPMRISTATPKQRSH 218
Query: 259 AS---------------------------------YQNSQVAQSDDDPNNTTVFVGNLDS 285
Y Q DPNNTTVFVG L
Sbjct: 219 HHQYGHHPPAPMMPPVPGHPAAPPMWGNYPYYGQQYNPIQPMNQFTDPNNTTVFVGGLSG 278
Query: 286 IVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 345
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSW
Sbjct: 279 YVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSW 338
Query: 346 GRSPSNK 352
GRS +N
Sbjct: 339 GRSQNNS 345
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 32/258 (12%)
Query: 158 NWASFGAGEKRDDTPD--HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRT 215
N A+F A PD T+++G++ + + ++ F+ + KV+ DR +G
Sbjct: 23 NEANFSAPAPIAPNPDAPKTLWMGEMEGWMDETFIKNVFQTVMGESVQVKVIRDRNSGNA 82
Query: 216 KGYGFVRFGDESEQLRAMTEMNG--VFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDP 273
GY FV F +A+ +NG V S R ++ A+ V + DD
Sbjct: 83 -GYCFVEFQTPEAAQKALG-LNGTPVPNSNRVFKLNWASGGGLVD---------RRDDRG 131
Query: 274 NNTTVFVGNLDSIVTDEHLRELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEE 326
++FVG+L V + L LF S++ KI + GFV+F+D + +
Sbjct: 132 PEYSIFVGDLGPEVNEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEADMQR 191
Query: 327 ALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPS 386
AL + G G + +R+S +P + YG+ P P
Sbjct: 192 ALVEMQGVYCGNRPMRISTA-TPKQRSHHHQ--------YGHHPPAPMMPPVPGHPAAPP 242
Query: 387 MYYGGYPGYGNYQQPQQP 404
M +G YP YG P QP
Sbjct: 243 M-WGNYPYYGQQYNPIQP 259
>gi|413936668|gb|AFW71219.1| hypothetical protein ZEAMMB73_649152 [Zea mays]
Length = 483
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/257 (52%), Positives = 154/257 (59%), Gaps = 27/257 (10%)
Query: 30 QQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQ------------ 77
QQ PPPQ ++ P Q Q A PQ A PPQQ
Sbjct: 104 QQHPPPQYYQQALLQPWGQQQQYAAPPLQYPPPPQTQQYATPPQQYAPLPQQQYAPPPQQ 163
Query: 78 ------------PGEIRTLWIGDLQYWMDETYL--NTCFAHTGEVVAVKVIRNKQTGQIE 123
GE+RTLWIGDLQ+WMDE YL N A ++ +VK+IRNKQTG E
Sbjct: 164 QYAPSPYGTTPGSGEVRTLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSE 223
Query: 124 GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLA 182
GYGFIEF SRA AE L FNG MPN E F+LNWAS G+KR D+ DHTIFVGDLA
Sbjct: 224 GYGFIEFSSRATAEHTLMNFNGQMMPNVEMTFKLNWASASTGDKRGDSGSDHTIFVGDLA 283
Query: 183 ADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCS 242
DVTD ML++ FRA+YPS + A VV+DR+TG KGYGFVRFGD +EQ AMTEMNG+ S
Sbjct: 284 HDVTDSMLEDVFRAKYPSVRRANVVVDRMTGWPKGYGFVRFGDLNEQAHAMTEMNGMLLS 343
Query: 243 TRPMRIGPATNKKTVSA 259
TR MRIG NKK A
Sbjct: 344 TRQMRIGATANKKNRDA 360
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 22/201 (10%)
Query: 163 GAGEKRDDTPDHTIFVGDLAADVTD-YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFV 221
G+GE R T+++GDL + + Y+ F A K++ ++ TG ++GYGF+
Sbjct: 175 GSGEVR------TLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGYGFI 228
Query: 222 RFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVG 281
F + + NG M SAS + + D ++ T+FVG
Sbjct: 229 EFSSRATAEHTLMNFNGQMMPNVEMTF----KLNWASASTGDKR----GDSGSDHTIFVG 280
Query: 282 NLDSIVTDEHLRELF-SQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGT 334
+L VTD L ++F ++Y + + + G FV+F D + A+ +NG
Sbjct: 281 DLAHDVTDSMLEDVFRAKYPSVRRANVVVDRMTGWPKGYGFVRFGDLNEQAHAMTEMNGM 340
Query: 335 QLGGQNIRLSWGRSPSNKQAQ 355
L + +R+ + N+ AQ
Sbjct: 341 LLSTRQMRIGATANKKNRDAQ 361
>gi|358380439|gb|EHK18117.1| hypothetical protein TRIVIDRAFT_117191, partial [Trichoderma virens
Gv29-8]
Length = 417
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/343 (41%), Positives = 191/343 (55%), Gaps = 53/343 (15%)
Query: 52 PPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF-AHTGEVVA 110
PPA +A P AG P Q Q + TLW+G+L+ WMDE ++ F + GE V
Sbjct: 28 PPA--TDMSAVPPPAG---PTQDQAK----TTLWMGELEPWMDENFIKGVFLSAAGETVN 78
Query: 111 VKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRD 169
VKVIR+K +G GY F+EF + A + L NGTP+PN + F+LNWAS G ++RD
Sbjct: 79 VKVIRDKNSGN-AGYCFVEFATPDAATKAL-GLNGTPVPNSSRQFKLNWASGGGLVDRRD 136
Query: 170 DT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D P+++IFVGDL +V +Y+L F+AR+PS K AK++ D ++G+++GYGFVRF DE++
Sbjct: 137 DRGPEYSIFVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDEND 196
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKK--------------------------------- 255
Q RA+ EM GV+C RPMRI AT K
Sbjct: 197 QQRALVEMQGVYCGNRPMRISTATPKNRGNHGFGHGHQGGPMMGGGMPQQQMWGGVQGFP 256
Query: 256 ------TVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 309
+ + DPNNTTVFVG L VT++ LR F +G++ +VKIP
Sbjct: 257 YGGGAGAGGGGFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPP 316
Query: 310 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
GK CGFVQF R AE A+ + G +G +RLSWGRS +N
Sbjct: 317 GKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNS 359
>gi|242824554|ref|XP_002488282.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
gi|218713203|gb|EED12628.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
Length = 392
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/334 (42%), Positives = 193/334 (57%), Gaps = 37/334 (11%)
Query: 49 QAQP-PAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE 107
QA P PA +A P AA QQG G+ TLW+G+L+ W+DE ++ + GE
Sbjct: 31 QADPSPAPFAGTPGEPSAAAT-----QQGGDGKT-TLWMGELEPWIDENFIRNLWFQMGE 84
Query: 108 VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AG 165
V VK+IR+K +G GY F++F S A A + L NGTPMPN + F+LNWA+ G A
Sbjct: 85 QVNVKMIRDKFSGSNAGYCFVDFASPAAAAKALSL-NGTPMPNTTRAFKLNWATGGGLAD 143
Query: 166 EKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFG 224
RD+ P+++IFVGDL +V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF
Sbjct: 144 RGRDERGPEYSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFS 203
Query: 225 DESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS------------------------ 260
DE++Q RA++EM GV+C RPMRI AT K
Sbjct: 204 DENDQQRALSEMQGVYCGNRPMRISTATPKNKGPGVGPGGMGMPGPAGIYPPAAMGGPPM 263
Query: 261 --YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQF 318
Y Q DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF
Sbjct: 264 GFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQF 323
Query: 319 ADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
R AE A+ + G +G +RLSWGRS +N
Sbjct: 324 VQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNS 357
>gi|440795338|gb|ELR16465.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 424
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 169/296 (57%), Gaps = 40/296 (13%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTLW+GD+ WMDE Y+ F EV VK+IR+K TG GYGF+EF S GA RVL
Sbjct: 19 RTLWVGDIDRWMDENYIVALFGSAAEVANVKIIRDKMTGLPAGYGFVEFKSHEGAARVLN 78
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPS 200
FN P+P ++FRLNWA+FG +R +T P+ ++FVGDLA +++D LQ F ARY S
Sbjct: 79 DFNNVPIPGVGRSFRLNWATFGIAARRPETGPEFSLFVGDLAPEISDDQLQAFFGARYRS 138
Query: 201 TKGAKVVIDRLTGRTK----------------------GYGFVRFGDESEQLRAMTEMNG 238
+ AKVV D T ++ GYGFVRFGDE+E AMTEM G
Sbjct: 139 VRSAKVVTDAATAASRGTCSSAINKHLFSHFALLCSADGYGFVRFGDETECYSAMTEMQG 198
Query: 239 VFCSTRPMRIGPATNKKTVSASYQNSQVAQSDD-----------------DPNNTTVFVG 281
+ +R +R+ AT KK+ S DP+NTT+FVG
Sbjct: 199 MMLGSRALRLSQATPKKSSSMGGGMGMPMGMPMGGGGGGGGHSAPMPEQADPSNTTIFVG 258
Query: 282 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLG 337
NLDS V ++ LR F +G+LV+V++P GK CGFVQF RSCAE A+ ++G +G
Sbjct: 259 NLDSTVGEDELRGHFMPFGELVYVRVPPGKNCGFVQFVHRSCAENAMLRVHGKTIG 314
>gi|242824548|ref|XP_002488281.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
gi|218713202|gb|EED12627.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
Length = 393
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/334 (42%), Positives = 193/334 (57%), Gaps = 37/334 (11%)
Query: 49 QAQP-PAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE 107
QA P PA +A P AA QQG G+ TLW+G+L+ W+DE ++ + GE
Sbjct: 31 QADPSPAPFAGTPGEPSAAAT-----QQGGDGKT-TLWMGELEPWIDENFIRNLWFQMGE 84
Query: 108 VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AG 165
V VK+IR+K +G GY F++F S A A + L NGTPMPN + F+LNWA+ G A
Sbjct: 85 QVNVKMIRDKFSGSNAGYCFVDFASPAAAAKALSL-NGTPMPNTTRAFKLNWATGGGLAD 143
Query: 166 EKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFG 224
RD+ P+++IFVGDL +V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF
Sbjct: 144 RGRDERGPEYSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFS 203
Query: 225 DESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS------------------------ 260
DE++Q RA++EM GV+C RPMRI AT K
Sbjct: 204 DENDQQRALSEMQGVYCGNRPMRISTATPKNKGPGVGPGGMGMPGPAGIYPPAAMGGPPM 263
Query: 261 --YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQF 318
Y Q DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF
Sbjct: 264 GFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQF 323
Query: 319 ADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
R AE A+ + G +G +RLSWGRS +N
Sbjct: 324 VQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNS 357
>gi|255954935|ref|XP_002568220.1| Pc21g11890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589931|emb|CAP96086.1| Pc21g11890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 408
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 138/315 (43%), Positives = 186/315 (59%), Gaps = 33/315 (10%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE-GYGF 127
A P QQG G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G+ GY F
Sbjct: 48 AAPVPQQGADGKT-TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGRSNAGYCF 106
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAAD 184
++F S A A + L NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL +
Sbjct: 107 VDFASPAAAAKALSL-NGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPE 165
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM GV+C R
Sbjct: 166 VNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNR 225
Query: 245 PMRIGPATNKKTVSAS---------------------------YQNSQVAQSDDDPNNTT 277
PMRI AT K Y Q DPNNTT
Sbjct: 226 PMRISTATPKNKGPGVGGNGGAAMGMPGPAGMYPPMGGPPMPFYGAPQPMNQFTDPNNTT 285
Query: 278 VFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLG 337
VFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G
Sbjct: 286 VFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIG 345
Query: 338 GQNIRLSWGRSPSNK 352
+RLSWGRS +N
Sbjct: 346 NSRVRLSWGRSQNNS 360
>gi|330935675|ref|XP_003305076.1| hypothetical protein PTT_17823 [Pyrenophora teres f. teres 0-1]
gi|311318022|gb|EFQ86789.1| hypothetical protein PTT_17823 [Pyrenophora teres f. teres 0-1]
Length = 471
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 123/301 (40%), Positives = 176/301 (58%), Gaps = 32/301 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+DE ++ + + + GE V VK+IR+K +G GY F++F S A + L
Sbjct: 66 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGSNAGYCFVDFASPDAAAKAL-G 124
Query: 143 FNGTPMPNGEQNFRLNWASFGA-GEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG+ +PN + F+LNWAS G ++R P+ ++FVGDL +VT+++L + F+ +Y ST
Sbjct: 125 LNGSLIPNSNRPFKLNWASGGGLADRRQRGPEFSVFVGDLGPEVTEFVLVQLFQNKYAST 184
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT----- 256
K AK++ D ++G ++GYGFVRF E +Q +A+TEM GV+C RPMRI AT K
Sbjct: 185 KSAKIMSDPISGMSRGYGFVRFASEDDQQKALTEMQGVYCGNRPMRISTATPKNKSGGPG 244
Query: 257 -------------------------VSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEH 291
+ Y Q DPNNTTVFVG L VT++
Sbjct: 245 GPGGMGMPQGGGGPGMGMYSMNAPPMGGYYGTPQPMNQFTDPNNTTVFVGGLSGYVTEDE 304
Query: 292 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 351
LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWGRS +N
Sbjct: 305 LRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 364
Query: 352 K 352
Sbjct: 365 S 365
>gi|346325712|gb|EGX95309.1| mRNA binding post-transcriptional regulator [Cordyceps militaris
CM01]
Length = 474
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 134/328 (40%), Positives = 185/328 (56%), Gaps = 41/328 (12%)
Query: 63 PQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQ 121
P + ++ PP TLW+G+L+ WMDE ++ F + GE V VKVIR+K +G
Sbjct: 88 PPSGDMSAPPPTGSSDQSKTTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSGN 147
Query: 122 IEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVG 179
GY F+EF + A + L NG P+PN + F+LNWAS G ++RDD P+++IFVG
Sbjct: 148 -AGYCFVEFQNADAASKAL-GLNGNPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVG 205
Query: 180 DLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV 239
DL +V +Y+L F+AR+PS K AK++ D ++G+++GYGFVRF DE++Q RA+ EM GV
Sbjct: 206 DLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGV 265
Query: 240 FCSTRPMRIGPATNKKTVS------------------------------------ASYQN 263
+C RPMRI AT K + Y
Sbjct: 266 YCGNRPMRISTATPKNRGNHGFGHGHHGGGGPMMGGGMPQQQQQPMWNGMQGFAYGGYNP 325
Query: 264 SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSC 323
+ DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R
Sbjct: 326 ATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHA 385
Query: 324 AEEALRMLNGTQLGGQNIRLSWGRSPSN 351
AE A+ + G +G +RLSWGRS +N
Sbjct: 386 AEMAINQMQGYPIGNSRVRLSWGRSQNN 413
>gi|225562584|gb|EEH10863.1| RNA-binding protein [Ajellomyces capsulatus G186AR]
Length = 427
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 131/320 (40%), Positives = 183/320 (57%), Gaps = 45/320 (14%)
Query: 77 QPGEIRT-LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE------------ 123
Q GE +T LW+G+L+ W+DE ++ + GE V VK+IR+K +G+
Sbjct: 59 QAGEAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGKQHESSRSNIDIPRS 118
Query: 124 --GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR---DDTPDHTIFV 178
GY F++F + A A + L T +GTP+PN + F+LNWAS G R + P+ +IFV
Sbjct: 119 NAGYCFVDFTTPAAAAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFV 177
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDL +V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM G
Sbjct: 178 GDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQG 237
Query: 239 VFCSTRPMRIGPATNKKTVSAS--------------------------YQNSQVAQSDDD 272
V+C RPMRI AT K + + Y Q D
Sbjct: 238 VYCGNRPMRISTATPKNKGAGAGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQPMNQFTD 297
Query: 273 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLN 332
PNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ +
Sbjct: 298 PNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQ 357
Query: 333 GTQLGGQNIRLSWGRSPSNK 352
G +G +RLSWGRS +N
Sbjct: 358 GYPIGNSRVRLSWGRSQNNS 377
>gi|402077003|gb|EJT72352.1| tRNA selenocysteine-associated protein 1 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 423
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 134/317 (42%), Positives = 179/317 (56%), Gaps = 46/317 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAER 138
+ +TLW+G+L+ WMDE ++ + GE V VKVIR++Q+G GY F+EF S A +
Sbjct: 41 DAKTLWMGELEPWMDENFVKQVWQTVCGEAVNVKVIRDRQSGN-AGYCFVEFNSAEAANK 99
Query: 139 VLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT--PDHTIFVGDLAADVTDYMLQETFRA 196
LQ NG+P+PN ++ F+LNWAS G R D P+ +IFVGDL +V +++L F+A
Sbjct: 100 ALQ-LNGSPVPNSQRVFKLNWASGGGLVDRRDERGPEFSIFVGDLGPEVNEFVLVSLFQA 158
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
R+PS K AK++ D +TG+++GYGFVRF DE +Q RA+ EM GV+C RPMRI AT K
Sbjct: 159 RFPSCKSAKIMTDAMTGQSRGYGFVRFTDEGDQQRALLEMQGVYCGNRPMRISTATPKTR 218
Query: 257 VSASY------------------QN-----------------------SQVAQSDDDPNN 275
Y QN Q DPNN
Sbjct: 219 SHQQYSAQGQHGGPMPMAAPAQQQNMNWGMPYGFNQPAPPAANNFNAAMQPMNQFTDPNN 278
Query: 276 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQ 335
TTVFVG L VT++ LR F +G + +VKIP GK CGFVQF R AE A+ + G
Sbjct: 279 TTVFVGGLSGYVTEDELRSFFQGFGDITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYP 338
Query: 336 LGGQNIRLSWGRSPSNK 352
+G +RLSWGRS +N
Sbjct: 339 IGNSRVRLSWGRSQNNS 355
>gi|414886902|tpg|DAA62916.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 308
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 119/184 (64%), Positives = 137/184 (74%), Gaps = 3/184 (1%)
Query: 79 GEIRTLWIGDLQYWMDETYL--NTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
GE+RTLWIGDLQ+WMDE YL N A ++ +VK+IRNKQTG EGYGFIEF SRA A
Sbjct: 111 GEVRTLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGYGFIEFYSRAAA 170
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFR 195
E L FNG MPN E F+LNWAS G+KR D+ D TIFVGDLA DVTD ML++ FR
Sbjct: 171 EHTLMNFNGQMMPNVEMTFKLNWASASTGDKRGDSGSDRTIFVGDLAHDVTDSMLEDVFR 230
Query: 196 ARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255
A+YPS +GA VV+DR+TG KG+GFVRFGD +EQ RAMTEMNG+ STR MRIG A NKK
Sbjct: 231 AKYPSVRGANVVVDRMTGWPKGFGFVRFGDLNEQARAMTEMNGMLLSTRQMRIGAAANKK 290
Query: 256 TVSA 259
A
Sbjct: 291 NRDA 294
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 22/201 (10%)
Query: 163 GAGEKRDDTPDHTIFVGDLAADVTD-YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFV 221
G+GE R T+++GDL + + Y+ F A K++ ++ TG ++GYGF+
Sbjct: 109 GSGEVR------TLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGYGFI 162
Query: 222 RFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVG 281
F + + NG M SAS + + D ++ T+FVG
Sbjct: 163 EFYSRAAAEHTLMNFNGQMMPNVEMTF----KLNWASASTGDKR----GDSGSDRTIFVG 214
Query: 282 NLDSIVTDEHLRELF-----SQYGQLVHVKIPAG--KRCGFVQFADRSCAEEALRMLNGT 334
+L VTD L ++F S G V V G K GFV+F D + A+ +NG
Sbjct: 215 DLAHDVTDSMLEDVFRAKYPSVRGANVVVDRMTGWPKGFGFVRFGDLNEQARAMTEMNGM 274
Query: 335 QLGGQNIRLSWGRSPSNKQAQ 355
L + +R+ + N+ AQ
Sbjct: 275 LLSTRQMRIGAAANKKNRDAQ 295
>gi|342875796|gb|EGU77504.1| hypothetical protein FOXB_11986 [Fusarium oxysporum Fo5176]
Length = 405
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 132/308 (42%), Positives = 181/308 (58%), Gaps = 41/308 (13%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTG-EVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
TLW+G+L+ WMDE ++ F E V VKVIR+K +G GY F+EF S A L
Sbjct: 45 TLWMGELEPWMDENFIKGVFMSAAHETVNVKVIRDKNSGN-AGYCFVEFQSPEAATNAL- 102
Query: 142 TFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+PN +++F+LNWAS G ++RDD P+++IFVGDL +V +Y+L F+AR+P
Sbjct: 103 GMNGKPVPNSQRSFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 162
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S K AK++ D ++G+++GYGFVRF DE++Q RA+ EM GV+C RPMRI AT K +
Sbjct: 163 SCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNH 222
Query: 260 SYQN-----------------------------------SQVAQSDDDPNNTTVFVGNLD 284
+ +Q+ Q DPNNTTVFVG L
Sbjct: 223 GFGGQGHHNGGPMMGGMPQQQMWNGGGMQGFGYGGFNPATQMNQF-TDPNNTTVFVGGLS 281
Query: 285 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 344
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLS
Sbjct: 282 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLS 341
Query: 345 WGRSPSNK 352
WGRS +N
Sbjct: 342 WGRSQNNS 349
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 31/211 (14%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++G+L + + ++ F + T KV+ D+ +G GY FV F A+
Sbjct: 45 TLWMGELEPWMDENFIKGVFMSAAHETVNVKVIRDKNSGNA-GYCFVEFQSPEAATNALG 103
Query: 235 EMNG--VFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 292
MNG V S R ++ A+ V + DD ++FVG+L V + L
Sbjct: 104 -MNGKPVPNSQRSFKLNWASGGGLVD---------RRDDRGPEYSIFVGDLGPEVNEYVL 153
Query: 293 RELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 345
LF +++ KI + GFV+F+D + + AL + G G + +R+S
Sbjct: 154 VSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRIS- 212
Query: 346 GRSPSNKQAQPDPNQWNAGYYGYAQGYENYG 376
A P N+ N G+ G QG+ N G
Sbjct: 213 -------TATPK-NRGNHGFGG--QGHHNGG 233
>gi|301107790|ref|XP_002902977.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098095|gb|EEY56147.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 382
Score = 243 bits (621), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 121/260 (46%), Positives = 171/260 (65%), Gaps = 7/260 (2%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E +TLW+GD+Q DE ++ + F+ E VK+IR+K TG GYGF+EF ++ GA++V
Sbjct: 4 ECKTLWMGDIQMHWDEAFITSLFSSAAEQPVVKLIRDKVTGYPAGYGFLEFPTQQGAQQV 63
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPD-HTIFVGDLAADVTDYMLQETFRARY 198
L+T NG +PN FR+NW GAG +R +T D H+IFVGDLA DVTD +L TF AR+
Sbjct: 64 LETLNGQLIPNTMHRFRMNW---GAGGRRIETSDDHSIFVGDLAPDVTDELLLATFNARF 120
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
+ +GAKVV+D +T +KG+GFVRFG + E +A+ MNGV+CS+RPMR+ AT + +
Sbjct: 121 TTVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRVSVATER---N 177
Query: 259 ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQF 318
S Q +++ NTTVFVG LD T++ LR F G +V VK+P G+ CGFVQ+
Sbjct: 178 KSRQQVGFTMGEEEGTNTTVFVGGLDPATTEDELRARFGALGAIVSVKVPPGRGCGFVQY 237
Query: 319 ADRSCAEEALRMLNGTQLGG 338
+ + AE A+ +NG + G
Sbjct: 238 SSKEAAEVAISQMNGQAVSG 257
>gi|425773059|gb|EKV11433.1| MRNA binding post-transcriptional regulator (Csx1), putative
[Penicillium digitatum Pd1]
gi|425778836|gb|EKV16941.1| MRNA binding post-transcriptional regulator (Csx1), putative
[Penicillium digitatum PHI26]
Length = 408
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 137/315 (43%), Positives = 186/315 (59%), Gaps = 33/315 (10%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE-GYGF 127
+ P QQG G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G+ GY F
Sbjct: 48 SAPVPQQGADGKT-TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGRSNAGYCF 106
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAAD 184
++F S A A + L NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL +
Sbjct: 107 VDFASPAAAAKALSL-NGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPE 165
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM GV+C R
Sbjct: 166 VNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNR 225
Query: 245 PMRIGPATNKKTVSAS---------------------------YQNSQVAQSDDDPNNTT 277
PMRI AT K Y Q DPNNTT
Sbjct: 226 PMRISTATPKNKGPGVGGNGGAAMGMPGPAGMYPPMGGPPMPFYGAPQPMNQFTDPNNTT 285
Query: 278 VFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLG 337
VFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G
Sbjct: 286 VFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIG 345
Query: 338 GQNIRLSWGRSPSNK 352
+RLSWGRS +N
Sbjct: 346 NSRVRLSWGRSQNNS 360
>gi|345561228|gb|EGX44324.1| hypothetical protein AOL_s00193g52 [Arthrobotrys oligospora ATCC
24927]
Length = 461
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 136/336 (40%), Positives = 186/336 (55%), Gaps = 40/336 (11%)
Query: 45 PPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAH 104
P QP +Q PA + +A A G TLW+G+L+ W+DE ++ + +
Sbjct: 31 PGQPPSQSPAPFNGNGSANGANGNDAK----------TTLWMGELEPWIDENFIRSVWYS 80
Query: 105 TGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA 164
GE V VK+IR+K G GY F++F S A + L NGT +PN + F+LNWAS G
Sbjct: 81 LGEQVNVKMIRDKFNGS-AGYCFVDFTSPQAAAKAL-ALNGTQIPNSNRPFKLNWASGGG 138
Query: 165 -GEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVR 222
++RDD P+++IFVGDL +V +++L F+ R+ S K AK++ D ++G ++GYGFVR
Sbjct: 139 LADRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQGRFQSCKSAKIMTDPISGMSRGYGFVR 198
Query: 223 FGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS---------------------- 260
F DE +Q RA+TEM GV+C RPMRI AT K
Sbjct: 199 FADEMDQQRALTEMQGVYCGNRPMRISTATPKNKGGNQGMMQQGMGGMAPQMGMYTMGAP 258
Query: 261 ----YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFV 316
Y Q DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFV
Sbjct: 259 TMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFV 318
Query: 317 QFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
QF R AE A+ + G +G +RLSWGRS +N
Sbjct: 319 QFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNS 354
>gi|154279514|ref|XP_001540570.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412513|gb|EDN07900.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 422
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 126/307 (41%), Positives = 179/307 (58%), Gaps = 36/307 (11%)
Query: 81 IRTLW------IGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRA 134
+ ++W +G+L+ W+DE ++ + GE V VK+IR+K +G GY F++F + A
Sbjct: 82 LSSMWRNACDGMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFTTPA 141
Query: 135 GAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR---DDTPDHTIFVGDLAADVTDYMLQ 191
A + L T +GTP+PN + F+LNWAS G R + P+ +IFVGDL +V +Y+L
Sbjct: 142 AAAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLV 200
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA+TEM GV+C RPMRI A
Sbjct: 201 SLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTA 260
Query: 252 TNKKTVSAS--------------------------YQNSQVAQSDDDPNNTTVFVGNLDS 285
T K + + Y Q DPNNTTVFVG L
Sbjct: 261 TPKNKGAGAGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSG 320
Query: 286 IVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 345
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSW
Sbjct: 321 YVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSW 380
Query: 346 GRSPSNK 352
GRS +N
Sbjct: 381 GRSQNNS 387
>gi|326524666|dbj|BAK04269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 408
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/310 (41%), Positives = 182/310 (58%), Gaps = 42/310 (13%)
Query: 83 TLWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
TLW+G+L+ WMDE ++ F + T E V VKVIR+K +G GY F+EF + A + L
Sbjct: 49 TLWMGELEPWMDENFIKGVFLSATTETVNVKVIRDKNSGN-AGYCFVEFQTPEAATKAL- 106
Query: 142 TFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYP 199
NG+ +PN ++F+LNWAS G ++RDD P+++IFVGDL +V +Y+L F+AR+P
Sbjct: 107 ALNGSGVPNSSRHFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 166
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT--- 256
S K AK++ D ++G+++GYGFVRF DE++Q RA+ EM GV+C RPMRI AT K
Sbjct: 167 SCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNH 226
Query: 257 -VSASYQNSQVA---------------------------------QSDDDPNNTTVFVGN 282
+ + N+ + DPNNTTVFVG
Sbjct: 227 GFAHGHHNAMMGGMPQQQMWAGGMQQGFPYGGGGGGGGFNPATQMNQFTDPNNTTVFVGG 286
Query: 283 LDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +R
Sbjct: 287 LSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVR 346
Query: 343 LSWGRSPSNK 352
LSWGRS +N
Sbjct: 347 LSWGRSQNNS 356
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 30/208 (14%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++G+L + + ++ F + T KV+ D+ +G GY FV F +A+
Sbjct: 49 TLWMGELEPWMDENFIKGVFLSATTETVNVKVIRDKNSGNA-GYCFVEFQTPEAATKALA 107
Query: 235 -EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
+GV S+R ++ A+ V + DD ++FVG+L V + L
Sbjct: 108 LNGSGVPNSSRHFKLNWASGGGLVD---------RRDDRGPEYSIFVGDLGPEVNEYVLV 158
Query: 294 ELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 346
LF +++ KI + GFV+F+D + + AL + G G + +R+S
Sbjct: 159 SLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRIS-- 216
Query: 347 RSPSNKQAQPDPNQWNAGYYGYAQGYEN 374
A P N G +G+A G+ N
Sbjct: 217 ------TATPK----NRGNHGFAHGHHN 234
>gi|350637619|gb|EHA25976.1| hypothetical protein ASPNIDRAFT_212792 [Aspergillus niger ATCC
1015]
Length = 403
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/314 (43%), Positives = 189/314 (60%), Gaps = 31/314 (9%)
Query: 68 VAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE-GYG 126
A P QQ G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G+ GY
Sbjct: 53 TAAPVPQQANEGKT-TLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGRSNAGYC 111
Query: 127 FIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAA 183
F++F S A A + L NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL
Sbjct: 112 FVDFASPAAAAKALSL-NGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGP 170
Query: 184 DVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST 243
+V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA++EM GV+C
Sbjct: 171 EVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGN 230
Query: 244 RPMRIGPATNKK---TVSAS----------------------YQNSQVAQSDDDPNNTTV 278
RPMRI AT K ++ A+ Y Q DPNNTTV
Sbjct: 231 RPMRISTATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTV 290
Query: 279 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 338
FVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G
Sbjct: 291 FVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGN 350
Query: 339 QNIRLSWGRSPSNK 352
+RLSWGRS +N
Sbjct: 351 SRVRLSWGRSQNNS 364
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 13/134 (9%)
Query: 27 APPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWI 86
A P+ + P + M MP P M+ A P A P Q T+++
Sbjct: 238 ATPKNKGPSLGAAGAMGMP-----GPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFV 292
Query: 87 GDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGT 146
G L ++ E L + F GE+ VK+ K G GF++F+ R AE + G
Sbjct: 293 GGLSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVQRHAAEMAINQMQGY 346
Query: 147 PMPNGEQNFRLNWA 160
P+ G RL+W
Sbjct: 347 PI--GNSRVRLSWG 358
>gi|440636370|gb|ELR06289.1| hypothetical protein, variant [Geomyces destructans 20631-21]
gi|440636371|gb|ELR06290.1| hypothetical protein GMDG_07882 [Geomyces destructans 20631-21]
Length = 411
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 144/361 (39%), Positives = 195/361 (54%), Gaps = 47/361 (13%)
Query: 30 QQQPP----PQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLW 85
Q QPP Q P M P AQ P + Q A Q G + G TLW
Sbjct: 26 QGQPPIQNMQQNMPGMQQTPQGSDAQAP--FQGQGAMEQGQGGST-----GAADSKTTLW 78
Query: 86 IGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNG 145
+G+L+ W+DE ++ + + GE V VK+IR+K +G GY FI+F + A + L + NG
Sbjct: 79 MGELEPWIDENFVRSVWFGMGEQVNVKMIRDKFSGN-AGYCFIDFTTPEAAAKAL-SLNG 136
Query: 146 TPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKG 203
+ +PN + F+LNWAS G ++RDD P+ +IFVGDL +V +Y+L F++R+PS K
Sbjct: 137 SMIPNTSRPFKLNWASGGGLADRRDDRGPEFSIFVGDLGPEVNEYVLVSLFQSRFPSCKS 196
Query: 204 AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS--- 260
AK++ D ++G ++GYGFVRF DE +Q RA+TEM GV+C RPMRI AT K
Sbjct: 197 AKIMTDPISGMSRGYGFVRFSDEGDQQRALTEMQGVYCGNRPMRISTATPKNKSGGGGPP 256
Query: 261 -----------------------------YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEH 291
Y Q DPNNTTVFVG L VT++
Sbjct: 257 GAMGGMPGAPMGGNMAPGMYSMGAPPIGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDE 316
Query: 292 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 351
LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWGRS +N
Sbjct: 317 LRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 376
Query: 352 K 352
Sbjct: 377 S 377
>gi|67904206|ref|XP_682359.1| hypothetical protein AN9090.2 [Aspergillus nidulans FGSC A4]
gi|40742733|gb|EAA61923.1| hypothetical protein AN9090.2 [Aspergillus nidulans FGSC A4]
gi|67043519|gb|AAY63883.1| putative RNA binding protein [Emericella nidulans]
gi|259485498|tpe|CBF82571.1| TPA: Putative RNA binding proteinPutative uncharacterized protein ;
[Source:UniProtKB/TrEMBL;Acc:Q5ARJ0] [Aspergillus
nidulans FGSC A4]
Length = 393
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/328 (42%), Positives = 191/328 (58%), Gaps = 32/328 (9%)
Query: 53 PAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
P+ Q AP AV QQG G+ TLW+G+L+ W+DE ++ + GE V VK
Sbjct: 39 PSTAPFQGPAPGEGAPAV--AQQGNEGKT-TLWMGELEPWIDENFVRNLWFQMGEQVNVK 95
Query: 113 VIRNKQTGQIE-GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRD 169
+IR+K +G+ GY F++F S A A + L NGTPMPN + F+LNWA+ G A RD
Sbjct: 96 MIRDKFSGRSNAGYCFVDFASPAAAAKALSL-NGTPMPNTNRLFKLNWATGGGLADRSRD 154
Query: 170 DT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D P+++IFVGDL +V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++
Sbjct: 155 DRGPEYSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDEND 214
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS------------------------YQNS 264
Q RA++EM GV+C RPMRI AT K Y
Sbjct: 215 QQRALSEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAP 274
Query: 265 QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 324
Q DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R A
Sbjct: 275 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAA 334
Query: 325 EEALRMLNGTQLGGQNIRLSWGRSPSNK 352
E A+ + G +G +RLSWGRS +N
Sbjct: 335 EMAINQMQGYPIGNSRVRLSWGRSQNNS 362
>gi|406866319|gb|EKD19359.1| RNA-binding protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 812
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/310 (41%), Positives = 178/310 (57%), Gaps = 42/310 (13%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+DE ++ + + GE V VK+IR+K +G GY FI+F S A A + L +
Sbjct: 308 TLWMGELEPWIDENFVRSVWFGMGEQVNVKMIRDKFSGN-AGYCFIDFSSPAAAAKAL-S 365
Query: 143 FNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG+ +PN + F+LNWAS G ++RDD P+++IFVGDL +V +Y+L F+AR+PS
Sbjct: 366 LNGSMIPNTARPFKLNWASGGGLADRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFPS 425
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
K AK++ D ++G ++GYGFVRF DE +Q RA+TEM GV+C RPMRI AT K
Sbjct: 426 CKSAKIMTDPISGMSRGYGFVRFADEGDQQRALTEMQGVYCGNRPMRISTATPKNKAGGG 485
Query: 261 YQNSQVAQSD--------------------------------------DDPNNTTVFVGN 282
Q DPNNTTVFVG
Sbjct: 486 GPAGMPMQQGGPNMGPGMPAAPGMYSMGAPPPMQYGGGYGQQQPMNQFTDPNNTTVFVGG 545
Query: 283 LDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +R
Sbjct: 546 LSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVR 605
Query: 343 LSWGRSPSNK 352
LSWGRS +N
Sbjct: 606 LSWGRSQNNS 615
>gi|317033242|ref|XP_001395129.2| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
niger CBS 513.88]
gi|317033244|ref|XP_003188853.1| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
niger CBS 513.88]
Length = 399
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 137/314 (43%), Positives = 189/314 (60%), Gaps = 31/314 (9%)
Query: 68 VAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE-GYG 126
A P QQ G+ TLW+G+L+ W+DE ++ + GE V VK+IR+K +G+ GY
Sbjct: 53 TAAPVPQQANEGKT-TLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGRSNAGYC 111
Query: 127 FIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAA 183
F++F S A A + L NGTPMPN + F+LNWA+ G A RDD P+++IFVGDL
Sbjct: 112 FVDFASPAAAAKALSL-NGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGP 170
Query: 184 DVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST 243
+V +Y+L F++R+PS K AK++ D ++G ++GYGFVRF DE++Q RA++EM GV+C
Sbjct: 171 EVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGN 230
Query: 244 RPMRIGPATNKK---TVSAS----------------------YQNSQVAQSDDDPNNTTV 278
RPMRI AT K ++ A+ Y Q DPNNTTV
Sbjct: 231 RPMRISTATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTV 290
Query: 279 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 338
FVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G
Sbjct: 291 FVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGN 350
Query: 339 QNIRLSWGRSPSNK 352
+RLSWGRS +N
Sbjct: 351 SRVRLSWGRSQNNS 364
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 13/134 (9%)
Query: 27 APPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWI 86
A P+ + P + M MP P M+ A P A P Q T+++
Sbjct: 238 ATPKNKGPSLGAAGAMGMP-----GPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFV 292
Query: 87 GDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGT 146
G L ++ E L + F GE+ VK+ K G GF++F+ R AE + G
Sbjct: 293 GGLSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVQRHAAEMAINQMQGY 346
Query: 147 PMPNGEQNFRLNWA 160
P+ G RL+W
Sbjct: 347 PI--GNSRVRLSWG 358
>gi|154296254|ref|XP_001548559.1| hypothetical protein BC1G_12954 [Botryotinia fuckeliana B05.10]
Length = 409
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 136/339 (40%), Positives = 190/339 (56%), Gaps = 47/339 (13%)
Query: 53 PAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
PA +A Q A + + +V + TLW+G+L+ W+DE ++ + + GE V VK
Sbjct: 49 PAPFAQQGAGVEGSSGSVTGDAK------TTLWMGELEPWIDENFIRSVWFGMGEQVNVK 102
Query: 113 VIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT 171
+IR+K +G GY FI+F S A A + L + NG+ +PN + F+LNWAS G ++RDD
Sbjct: 103 MIRDKFSGN-AGYCFIDFTSPAAAAKAL-SLNGSMIPNTTRPFKLNWASGGGLADRRDDR 160
Query: 172 -PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
P+ +IFVGDL +V +Y+L F+AR+PS K AK++ D ++G ++GYGFVRF +E +Q
Sbjct: 161 GPEFSIFVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDPISGMSRGYGFVRFAEEGDQQ 220
Query: 231 RAMTEMNGVFCSTRPMRIGPATNKKTVSAS------------------------------ 260
RA+TEM GV+C RPMRI AT K +
Sbjct: 221 RALTEMQGVYCGNRPMRISTATPKNKSGGAGPAGMQMQGGGGGGMPGAMGGAPGMYGMGG 280
Query: 261 -------YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 313
Y Q DPNNTTVFVG L VT++ LR F +G++ +VKIP GK C
Sbjct: 281 GPPMAGYYGTPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGC 340
Query: 314 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
GFVQF R AE A+ + G +G +RLSWGRS +N
Sbjct: 341 GFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNS 379
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 84/193 (43%), Gaps = 22/193 (11%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++G+L + + ++ + K++ D+ +G GY F+ F + +A++
Sbjct: 73 TLWMGELEPWIDENFIRSVWFGMGEQVN-VKMIRDKFSGNA-GYCFIDFTSPAAAAKALS 130
Query: 235 EMNGVFC--STRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 292
+NG +TRP ++ A+ + DD ++FVG+L V + L
Sbjct: 131 -LNGSMIPNTTRPFKLNWASGGGLAD---------RRDDRGPEFSIFVGDLGPEVNEYVL 180
Query: 293 RELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 345
LF +++ KI + GFV+FA+ + AL + G G + +R+S
Sbjct: 181 VSLFQARFPSCKSAKIMTDPISGMSRGYGFVRFAEEGDQQRALTEMQGVYCGNRPMRIST 240
Query: 346 GRSPSNKQAQPDP 358
+P NK P
Sbjct: 241 A-TPKNKSGGAGP 252
>gi|46122719|ref|XP_385913.1| hypothetical protein FG05737.1 [Gibberella zeae PH-1]
Length = 409
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 136/328 (41%), Positives = 187/328 (57%), Gaps = 40/328 (12%)
Query: 62 APQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTG-EVVAVKVIRNKQTG 120
AP GVA PP + TLW+G+L+ WMDE ++ F + E V VKVIR+K +G
Sbjct: 30 APDMGGVAPPPGSGPDSPKT-TLWMGELEPWMDENFIKGVFLSSAHENVNVKVIRDKNSG 88
Query: 121 QIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFV 178
GY F+EF S A + L NG+ +PN ++F+LNWAS G ++RDD P+++IFV
Sbjct: 89 N-AGYCFVEFQSPEAATKAL-NMNGSQVPNSSRSFKLNWASGGGLVDRRDDRGPEYSIFV 146
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDL +V +Y+L F+AR+PS K AK++ D ++G+++GYGFVRF DE++Q RA+ EM G
Sbjct: 147 GDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQG 206
Query: 239 VFCSTRPMRIGPATNKKTVS----------------------------------ASYQNS 264
V+C RPMRI AT K + + +
Sbjct: 207 VYCGNRPMRISTATPKNRGNHGFGGQGHQHGGPMMPGMPQQQMWNGGGMQGFPYGGFNPA 266
Query: 265 QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 324
DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R A
Sbjct: 267 TQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAA 326
Query: 325 EEALRMLNGTQLGGQNIRLSWGRSPSNK 352
E A+ + G +G +RLSWGRS +N
Sbjct: 327 EMAINQMQGYPIGNSRVRLSWGRSQNNS 354
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 103/254 (40%), Gaps = 48/254 (18%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++G+L + + ++ F + KV+ D+ +G GY FV F +A+
Sbjct: 50 TLWMGELEPWMDENFIKGVFLSSAHENVNVKVIRDKNSGNA-GYCFVEFQSPEAATKALN 108
Query: 235 EMNG--VFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 292
MNG V S+R ++ A+ V + DD ++FVG+L V + L
Sbjct: 109 -MNGSQVPNSSRSFKLNWASGGGLVD---------RRDDRGPEYSIFVGDLGPEVNEYVL 158
Query: 293 RELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 345
LF +++ KI + GFV+F+D + + AL + G G + +R+S
Sbjct: 159 VSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRIST 218
Query: 346 GRSPSNKQ-----------------AQPDPNQWNAGYYGYAQGYENYGYAAAA------- 381
+P N+ P WN G QG+ G+ A
Sbjct: 219 A-TPKNRGNHGFGGQGHQHGGPMMPGMPQQQMWNG---GGMQGFPYGGFNPATQMNQFTD 274
Query: 382 PQDPSMYYGGYPGY 395
P + +++ GG GY
Sbjct: 275 PNNTTVFVGGLSGY 288
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 13/120 (10%)
Query: 43 MMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGE--IRTLWIGDLQYWMDETYLNT 100
MMP PQ Q MW G P Q Q + T+++G L ++ E L +
Sbjct: 240 MMPGMPQQQ---MWNGGGMQGFPYGGFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRS 296
Query: 101 CFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160
F GE+ VK+ K G GF++F+ R AE + G P+ G RL+W
Sbjct: 297 FFQGFGEITYVKIPPGK------GCGFVQFVHRHAAEMAINQMQGYPI--GNSRVRLSWG 348
>gi|396480654|ref|XP_003841045.1| hypothetical protein LEMA_P089750.1 [Leptosphaeria maculans JN3]
gi|312217619|emb|CBX97566.1| hypothetical protein LEMA_P089750.1 [Leptosphaeria maculans JN3]
Length = 433
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 178/302 (58%), Gaps = 34/302 (11%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+DE ++ + + + GE V VK+IR+K +G GY F++F S A + L T
Sbjct: 73 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGN-AGYCFVDFSSPDAAAKAL-T 130
Query: 143 FNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYP 199
NG +PN + F+LNWAS G A RD+ P+++IFVGDL +VT+++L + F+ +YP
Sbjct: 131 LNGQLIPNSNRPFKLNWASGGGLADRSRDERGPEYSIFVGDLGPEVTEFVLVQLFQNKYP 190
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
STK AK++ D ++G ++GYGFVRF E +Q +A+TEM GV+C RPMRI AT K
Sbjct: 191 STKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRISTATPKNKSGG 250
Query: 260 S-----------------------------YQNSQVAQSDDDPNNTTVFVGNLDSIVTDE 290
Y Q DPNNTTVFVG L VT++
Sbjct: 251 PGGPGGMGMPQQGGGPGMGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTED 310
Query: 291 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWGRS +
Sbjct: 311 ELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQN 370
Query: 351 NK 352
N
Sbjct: 371 NS 372
>gi|452982866|gb|EME82624.1| hypothetical protein MYCFIDRAFT_51313 [Pseudocercospora fijiensis
CIRAD86]
Length = 414
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 126/299 (42%), Positives = 174/299 (58%), Gaps = 31/299 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+DE ++ + + G V VK+IR+K +G GY F++F + A R L
Sbjct: 82 TLWMGELEPWIDENFIRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENPDSAARAL-A 140
Query: 143 FNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYP 199
NG +PN + F+LNWAS G A RDD P+++IFVGDL +V +Y+L F+ +YP
Sbjct: 141 LNGQMIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLMSLFQNKYP 200
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S K AK++ D ++G ++GYGFVRF DE++Q +A+ EM GV+C RPMRI AT K
Sbjct: 201 SCKSAKIMSDPISGMSRGYGFVRFADETDQQKALHEMQGVYCGNRPMRISTATPKNKSGG 260
Query: 260 S---------------------------YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 292
+ Y Q DPNNTTVFVG L VT++ L
Sbjct: 261 AGGPGMGGMQQVPGGQGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 320
Query: 293 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 351
R F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWGRS +N
Sbjct: 321 RSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 379
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 22/188 (11%)
Query: 175 TIFVGDLAADVTDYMLQET-FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
T+++G+L + + ++ F Y K++ D+ +G GY FV F + RA+
Sbjct: 82 TLWMGELEPWIDENFIRSVWFGMGYQVN--VKMIRDKFSGSNAGYCFVDFENPDSAARAL 139
Query: 234 TEMNGVFC--STRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEH 291
+NG S R ++ A+ S DD ++FVG+L V +
Sbjct: 140 A-LNGQMIPNSNRQFKLNWASGGGLADRS--------RDDRGPEYSIFVGDLGPEVNEYV 190
Query: 292 LRELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 344
L LF ++Y KI + + GFV+FAD + ++AL + G G + +R+S
Sbjct: 191 LMSLFQNKYPSCKSAKIMSDPISGMSRGYGFVRFADETDQQKALHEMQGVYCGNRPMRIS 250
Query: 345 WGRSPSNK 352
+P NK
Sbjct: 251 TA-TPKNK 257
>gi|408392147|gb|EKJ71507.1| hypothetical protein FPSE_08320 [Fusarium pseudograminearum CS3096]
Length = 442
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 136/329 (41%), Positives = 187/329 (56%), Gaps = 41/329 (12%)
Query: 62 APQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTG-EVVAVKVIRNKQTG 120
AP GVA PP + TLW+G+L+ WMDE ++ F + E V VKVIR+K +G
Sbjct: 30 APDMGGVAPPPGSGPDSPKT-TLWMGELEPWMDENFIKGVFLSSAHENVNVKVIRDKNSG 88
Query: 121 QIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFV 178
GY F+EF S A + L NG+ +PN ++F+LNWAS G ++RDD P+++IFV
Sbjct: 89 N-AGYCFVEFQSPEAATKAL-NMNGSQVPNSSRSFKLNWASGGGLVDRRDDRGPEYSIFV 146
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDL +V +Y+L F+AR+PS K AK++ D ++G+++GYGFVRF DE++Q RA+ EM G
Sbjct: 147 GDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQG 206
Query: 239 VFCSTRPMRIGPATNKKTVS-----------------------------------ASYQN 263
V+C RPMRI AT K + +
Sbjct: 207 VYCGNRPMRISTATPKNRGNHGFGGQGHQHGGPMMPGMPQQQQMWNGGGMQGFPYGGFNP 266
Query: 264 SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSC 323
+ DPNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R
Sbjct: 267 ATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHA 326
Query: 324 AEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
AE A+ + G +G +RLSWGRS +N
Sbjct: 327 AEMAINQMQGYPIGNSRVRLSWGRSQNNS 355
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 12/120 (10%)
Query: 43 MMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGE--IRTLWIGDLQYWMDETYLNT 100
MMP PQ Q MW G P Q Q + T+++G L ++ E L +
Sbjct: 240 MMPGMPQQQ--QMWNGGGMQGFPYGGFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRS 297
Query: 101 CFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160
F GE+ VK+ K G GF++F+ R AE + G P+ G RL+W
Sbjct: 298 FFQGFGEITYVKIPPGK------GCGFVQFVHRHAAEMAINQMQGYPI--GNSRVRLSWG 349
>gi|315043939|ref|XP_003171345.1| RNA-binding post-transcriptional regulator csx1 [Arthroderma
gypseum CBS 118893]
gi|311343688|gb|EFR02891.1| RNA-binding post-transcriptional regulator csx1 [Arthroderma
gypseum CBS 118893]
Length = 412
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/318 (41%), Positives = 181/318 (56%), Gaps = 43/318 (13%)
Query: 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
QP TLW+G+L+ W+DE ++ + GE V VK+IR+K +G GY F++F + A A
Sbjct: 57 QPDGKTTLWMGELEGWIDENFIRNIWYQMGEQVNVKMIRDKFSGANAGYCFVDFATPAAA 116
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR---DDTPDHTIFVGDLAADVTDYMLQET 193
+ L T NGTPMPN ++ F+LNWAS G R + P+ +IFVGDL +V +Y+L
Sbjct: 117 AKAL-TVNGTPMPNTQRPFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSL 175
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F++R+PS K AK++ D +TG ++GYGFVRF DE++Q RA++EM GV+C RPMRI AT
Sbjct: 176 FQSRFPSCKSAKIMTDPITGLSRGYGFVRFSDETDQQRALSEMQGVYCGNRPMRISTATP 235
Query: 254 KKTVSAS-------------------------------------YQNS--QVAQSDDDPN 274
K A Y + Q DPN
Sbjct: 236 KNKGPAGPGGPAHMGVPGGPPGGMYPPSMGGAGGPPGPGGPQMGYYGAAPQPMNQFTDPN 295
Query: 275 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGT 334
NTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G
Sbjct: 296 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 355
Query: 335 QLGGQNIRLSWGRSPSNK 352
+G +RLSWGRS +N
Sbjct: 356 PIGNSRVRLSWGRSQNNS 373
>gi|358401132|gb|EHK50447.1| hypothetical protein TRIATDRAFT_297212 [Trichoderma atroviride IMI
206040]
Length = 409
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 143/348 (41%), Positives = 195/348 (56%), Gaps = 59/348 (16%)
Query: 52 PPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF-AHTGEVVA 110
PPA +A P AG P Q Q + TLW+G+L+ WMDE ++ F + GE V
Sbjct: 8 PPA--TDMSAVPSPAG---PTQDQAKT----TLWMGELEPWMDENFIKGVFLSSAGETVN 58
Query: 111 VKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRD 169
VKVIR+K +G GY F+EF + A + L NG +PN ++ F+LNWAS G ++RD
Sbjct: 59 VKVIRDKNSGN-AGYCFVEFPTPDSATKAL-GLNGQAVPNSQRQFKLNWASGGGLVDRRD 116
Query: 170 DT-PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D P+++IFVGDL +V +Y+L F+AR+PS K AK++ D ++G+++GYGFVRF DE++
Sbjct: 117 DRGPEYSIFVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDEND 176
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVS------------------------ASYQN- 263
Q RA+ EM GV+C RPMRI AT K + QN
Sbjct: 177 QQRALVEMQGVYCGNRPMRISTATPKNRGNHGFGHGHQGGPMMGGGMPQQQQMWGGVQNF 236
Query: 264 -------------------SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 304
+Q+ Q D PNNTTVFVG L VT++ LR F +G++ +
Sbjct: 237 PYGGGGGGGGGGGGNFNPATQMNQFTD-PNNTTVFVGGLSGYVTEDELRSFFQGFGEITY 295
Query: 305 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
VKIP GK CGFVQF R AE A+ + G +G +RLSWGRS +N
Sbjct: 296 VKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNS 343
>gi|451846221|gb|EMD59531.1| hypothetical protein COCSADRAFT_251085 [Cochliobolus sativus
ND90Pr]
Length = 406
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 177/303 (58%), Gaps = 35/303 (11%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+DE ++ + + + GE V VK+IR+K +G GY F++F S A + L
Sbjct: 65 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGN-AGYCFVDFASPDAAAKAL-N 122
Query: 143 FNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYP 199
NG +PN + F+LNWAS G A RD+ P+ +IFVGDL +VT+++L + F+ +YP
Sbjct: 123 LNGQLIPNSNRPFKLNWASGGGLADRSRDERGPEFSIFVGDLGPEVTEFVLVQLFQNKYP 182
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT--- 256
STK AK++ D ++G ++GYGFVRF E +Q +A+TEM GV+C RPMRI AT K
Sbjct: 183 STKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRISTATPKNKSGG 242
Query: 257 ---------------------------VSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTD 289
+ Y Q DPNNTTVFVG L VT+
Sbjct: 243 PGGPGGMGMPQGAGGPGMGMYSMGAPPMGNYYGAPQPMNQFTDPNNTTVFVGGLSGYVTE 302
Query: 290 EHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP 349
+ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWGRS
Sbjct: 303 DELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQ 362
Query: 350 SNK 352
+N
Sbjct: 363 NNS 365
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 94/239 (39%), Gaps = 33/239 (13%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++G+L + + ++ + T K++ D+ +G GY FV F +A+
Sbjct: 65 TLWMGELEPWIDENFVRSIWY-NMGETVNVKMIRDKFSGNA-GYCFVDFASPDAAAKALN 122
Query: 235 EMNGVFC--STRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 292
+NG S RP ++ A+ S D+ ++FVG+L VT+ L
Sbjct: 123 -LNGQLIPNSNRPFKLNWASGGGLADRS--------RDERGPEFSIFVGDLGPEVTEFVL 173
Query: 293 RELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 345
+LF ++Y KI + + GFV+FA ++AL + G G + +R+S
Sbjct: 174 VQLFQNKYPSTKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRIST 233
Query: 346 GRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQP 404
+P NK A MY G P GNY QP
Sbjct: 234 A-TPKNKSGG------------PGGPGGMGMPQGAGGPGMGMYSMGAPPMGNYYGAPQP 279
>gi|453086344|gb|EMF14386.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 425
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/308 (41%), Positives = 174/308 (56%), Gaps = 40/308 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+DE ++ + + G V VK+IR+K +G GY F++F + A R LQ
Sbjct: 84 TLWMGELEPWIDENFVRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENPDAAGRALQ- 142
Query: 143 FNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYP 199
NG +PN + F+LNWAS G A RDD P+++IFVGDL +V +Y+L F+ +YP
Sbjct: 143 LNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLMSLFQNKYP 202
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S K AK++ D ++G ++GYGFVRF DE +Q +A+ EM GV+C RPMRI AT K
Sbjct: 203 SCKSAKIMSDPISGMSRGYGFVRFADEQDQQKALHEMQGVYCGNRPMRISTATPKNKSGG 262
Query: 260 S------------------------------------YQNSQVAQSDDDPNNTTVFVGNL 283
+ Y Q DPNNTTVFVG L
Sbjct: 263 AAVPPGGMPQPGMPGGPAAGGPQMPGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGL 322
Query: 284 DSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRL 343
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RL
Sbjct: 323 SGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRL 382
Query: 344 SWGRSPSN 351
SWGRS +N
Sbjct: 383 SWGRSQNN 390
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 102/240 (42%), Gaps = 31/240 (12%)
Query: 175 TIFVGDLAADVTDYMLQET-FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
T+++G+L + + ++ F Y K++ D+ +G GY FV F + RA+
Sbjct: 84 TLWMGELEPWIDENFVRSVWFGMGYQVN--VKMIRDKFSGSNAGYCFVDFENPDAAGRAL 141
Query: 234 TEMNGVFC--STRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEH 291
++NG S R ++ A+ S DD ++FVG+L V +
Sbjct: 142 -QLNGQVIPNSNRQFKLNWASGGGLADRS--------RDDRGPEYSIFVGDLGPEVNEYV 192
Query: 292 LRELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 344
L LF ++Y KI + + GFV+FAD ++AL + G G + +R+S
Sbjct: 193 LMSLFQNKYPSCKSAKIMSDPISGMSRGYGFVRFADEQDQQKALHEMQGVYCGNRPMRIS 252
Query: 345 WGRSPSNKQ--AQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQ 402
+P NK A P G Q G AA PQ P MY G P G Y PQ
Sbjct: 253 TA-TPKNKSGGAAVPPG-------GMPQPGMPGGPAAGGPQMPGMYSMGAPPMGYYGAPQ 304
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
Query: 51 QPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVA 110
Q P M++ A G P Q P T+++G L ++ E L + F GE+
Sbjct: 285 QMPGMYSMGAPPMGYYGAPQPMNQFTDPNNT-TVFVGGLSGYVTEDELRSFFQGFGEITY 343
Query: 111 VKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160
VK+ K G GF++F+ R AE + G P+ G RL+W
Sbjct: 344 VKIPPGK------GCGFVQFVQRHAAEMAINQMQGYPI--GNSRVRLSWG 385
>gi|452844119|gb|EME46053.1| hypothetical protein DOTSEDRAFT_70146 [Dothistroma septosporum
NZE10]
Length = 407
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 130/316 (41%), Positives = 177/316 (56%), Gaps = 39/316 (12%)
Query: 75 QGQPGEIR------TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
QG PG + TLW+G+L+ W+DE ++ + + G V VK+IR+K +G GY F+
Sbjct: 58 QGPPGSAQGGDQKTTLWMGELEPWIDENFVRSVWFGMGYQVNVKMIRDKFSGSNAGYCFV 117
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADV 185
+F + A R LQ NG +PN + F+LNWAS G A RDD P+++IFVGDL +V
Sbjct: 118 DFENPESATRALQ-LNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEV 176
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
+Y+L F+ +Y S K AK++ D ++G ++GYGFVRF DE +Q +A+ EM GV+C RP
Sbjct: 177 NEYVLMSLFQGKYTSCKSAKIMSDPISGMSRGYGFVRFADEGDQQKALHEMQGVYCGNRP 236
Query: 246 MRIGPATNKKTVSAS-----------------------------YQNSQVAQSDDDPNNT 276
MRI AT K Y Q DPNNT
Sbjct: 237 MRISTATPKNKSGGGGPGMPGMQGGMGPGAPGGVYAMGAPPMGYYGAPQPMNQFTDPNNT 296
Query: 277 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQL 336
TVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +
Sbjct: 297 TVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPI 356
Query: 337 GGQNIRLSWGRSPSNK 352
G +RLSWGRS +N
Sbjct: 357 GNSRVRLSWGRSQNNS 372
>gi|169616740|ref|XP_001801785.1| hypothetical protein SNOG_11545 [Phaeosphaeria nodorum SN15]
gi|111060133|gb|EAT81253.1| hypothetical protein SNOG_11545 [Phaeosphaeria nodorum SN15]
Length = 408
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 128/311 (41%), Positives = 183/311 (58%), Gaps = 36/311 (11%)
Query: 76 GQPGEIRT-LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRA 134
GQP +T LW+G+L+ W+DE ++ + + + GE V VK+IR+K +G GY F++F +
Sbjct: 54 GQPSAGKTTLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGN-AGYCFVDFSTPE 112
Query: 135 GAERVLQTFNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADVTDYMLQ 191
A + L + NG +PN + F+LNWAS G A RD+ P+++IFVGDL +VT+++L
Sbjct: 113 AAAKAL-SLNGQLIPNSNRPFKLNWASGGGLADRSRDERGPEYSIFVGDLGPEVTEFVLV 171
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
+ F+ +Y STK AK++ D ++G ++GYGFVRF DE++Q +A+T+M GV+C RPMRI A
Sbjct: 172 QLFQNKYRSTKSAKIMSDPISGMSRGYGFVRFADEADQQKALTDMQGVYCGNRPMRISTA 231
Query: 252 TNKKTVSAS------------------------------YQNSQVAQSDDDPNNTTVFVG 281
T K Y Q DPNNTTVFVG
Sbjct: 232 TPKNKSGGPGGPGGMGMQQGGPGGPGMGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVG 291
Query: 282 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +
Sbjct: 292 GLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRV 351
Query: 342 RLSWGRSPSNK 352
RLSWGRS +N
Sbjct: 352 RLSWGRSQNNS 362
>gi|213401961|ref|XP_002171753.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
gi|211999800|gb|EEB05460.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
Length = 476
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 128/283 (45%), Positives = 170/283 (60%), Gaps = 18/283 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L ++ E + + GE V VK+IR++ +G GY F+EF S A A + + +
Sbjct: 99 TLWMGELAPFITEAMVQQIWNSLGENVNVKIIRDRYSGLNAGYCFVEFNSPASAMKAM-S 157
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDD--TPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NGT +P + F+LNWAS G R + TP+ +IFVGDL +VT+ ML F++RY S
Sbjct: 158 LNGTVIPGTNRFFKLNWASGGGLHDRREGKTPEFSIFVGDLGPEVTEPMLLSLFQSRYRS 217
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS-- 258
K AK+++D T ++GYGFVRF DE++Q RA+TEM GV+C RPMRI AT K
Sbjct: 218 CKSAKIMMDSNTNLSRGYGFVRFYDENDQKRALTEMQGVYCGNRPMRIAMATPKSKNHMY 277
Query: 259 -------------ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 305
Y Q DP NTTVFVG L VT+E LR LF +G++++V
Sbjct: 278 SPMNMMHIGLQPVGFYGAPQPVNQFTDPTNTTVFVGGLSGYVTEEELRFLFQNFGEIIYV 337
Query: 306 KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
KIP GK CGFVQF +R AE A+ + G LG IRLSWGRS
Sbjct: 338 KIPPGKGCGFVQFVNRQSAELAINQMQGYPLGKSRIRLSWGRS 380
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
Query: 274 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEA 327
NN+T+++G L +T+ ++++++ G+ V+VKI + G FV+F + A +A
Sbjct: 96 NNSTLWMGELAPFITEAMVQQIWNSLGENVNVKIIRDRYSGLNAGYCFVEFNSPASAMKA 155
Query: 328 LRMLNGTQLGGQN--IRLSW 345
+ LNGT + G N +L+W
Sbjct: 156 MS-LNGTVIPGTNRFFKLNW 174
>gi|189197507|ref|XP_001935091.1| mRNA binding post-transcriptional regulator (Csx1) [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187981039|gb|EDU47665.1| mRNA binding post-transcriptional regulator (Csx1) [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 490
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 124/320 (38%), Positives = 177/320 (55%), Gaps = 51/320 (15%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+DE ++ + + + GE V VK+IR+K +G GY F++F S A + L +
Sbjct: 66 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGSNAGYCFVDFASPDAAAKAL-S 124
Query: 143 FNGTPMPNGEQNFRLNWASFGA-------------------GEKRDDT-PDHTIFVGDLA 182
NG+ +PN + F+LNWAS G RD+ P+ ++FVGDL
Sbjct: 125 LNGSLIPNSNRPFKLNWASGGGLADRRQVSQVSKYKHMANESNSRDERGPEFSVFVGDLG 184
Query: 183 ADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCS 242
+VT+++L + F+ +Y STK AK++ D ++G ++GYGFVRF E +Q +A+TEM GV+C
Sbjct: 185 PEVTEFVLVQLFQNKYASTKSAKIMSDPISGMSRGYGFVRFASEDDQQKALTEMQGVYCG 244
Query: 243 TRPMRIGPATNKKT------------------------------VSASYQNSQVAQSDDD 272
RPMRI AT K + Y Q D
Sbjct: 245 NRPMRISTATPKNKSGGPGGPGGMGMPQGGGGPGMGMYSMNAPPMGGYYGTPQPMNQFTD 304
Query: 273 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLN 332
PNNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ +
Sbjct: 305 PNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQ 364
Query: 333 GTQLGGQNIRLSWGRSPSNK 352
G +G +RLSWGRS +N
Sbjct: 365 GYPIGNSRVRLSWGRSQNNS 384
>gi|451993069|gb|EMD85544.1| hypothetical protein COCHEDRAFT_1035442 [Cochliobolus
heterostrophus C5]
Length = 409
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 125/306 (40%), Positives = 175/306 (57%), Gaps = 38/306 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+DE ++ + + + GE V VK+IR+K +G GY F++F S A + L
Sbjct: 65 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGN-AGYCFVDFASPDAAAKAL-N 122
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKR------DDTPDHTIFVGDLAADVTDYMLQETFRA 196
NG +PN + F+LNWAS G R + P+ +IFVGDL +VT+++L + F+
Sbjct: 123 LNGQLIPNSNRPFKLNWASGGGLADRRQVIRDERGPEFSIFVGDLGPEVTEFVLVQLFQN 182
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+YPSTK AK++ D ++G ++GYGFVRF E +Q +A+TEM GV+C RPMRI AT K
Sbjct: 183 KYPSTKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRISTATPKNK 242
Query: 257 ------------------------------VSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
+ Y Q DPNNTTVFVG L
Sbjct: 243 SGGPGGPGGMGMPQGAGGPGMGMYSMGAPPMGNYYGAPQPMNQFTDPNNTTVFVGGLSGY 302
Query: 287 VTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 346
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWG
Sbjct: 303 VTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 362
Query: 347 RSPSNK 352
RS +N
Sbjct: 363 RSQNNS 368
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 96/239 (40%), Gaps = 30/239 (12%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++G+L + + ++ + T K++ D+ +G GY FV F +A+
Sbjct: 65 TLWMGELEPWIDENFVRSIWY-NMGETVNVKMIRDKFSGNA-GYCFVDFASPDAAAKALN 122
Query: 235 EMNGVFC--STRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 292
+NG S RP ++ N + QV + + P ++FVG+L VT+ L
Sbjct: 123 -LNGQLIPNSNRPFKL----NWASGGGLADRRQVIRDERGPE-FSIFVGDLGPEVTEFVL 176
Query: 293 RELF-SQYGQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 345
+LF ++Y KI + + GFV+FA ++AL + G G + +R+S
Sbjct: 177 VQLFQNKYPSTKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRIST 236
Query: 346 GRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQP 404
+P NK A MY G P GNY QP
Sbjct: 237 A-TPKNKSGG------------PGGPGGMGMPQGAGGPGMGMYSMGAPPMGNYYGAPQP 282
>gi|398412748|ref|XP_003857692.1| hypothetical protein MYCGRDRAFT_65137 [Zymoseptoria tritici IPO323]
gi|339477577|gb|EGP92668.1| hypothetical protein MYCGRDRAFT_65137 [Zymoseptoria tritici IPO323]
Length = 437
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 172/304 (56%), Gaps = 36/304 (11%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+DE ++ + + G V VK+IR+K +G GY F++F + A R LQ
Sbjct: 73 TLWMGELEPWIDENFVRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENPDQATRALQ- 131
Query: 143 FNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYP 199
NG +PN + F+LNWAS G A RDD P+ +IFVGDL +V +Y+L F+ +Y
Sbjct: 132 LNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPEFSIFVGDLGPEVNEYVLMSLFQGKYT 191
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S K AK++ D ++G ++GYGFVRF DE +Q +A+ EM GV+C RPMRI AT K A
Sbjct: 192 SCKSAKIMSDPISGMSRGYGFVRFADEQDQQKALHEMQGVYCGNRPMRISTATPKNKSGA 251
Query: 260 S--------------------------------YQNSQVAQSDDDPNNTTVFVGNLDSIV 287
Y Q DPNNTTVFVG L V
Sbjct: 252 GGPGGMPGMGPPGGPGGNPNMGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYV 311
Query: 288 TDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
T++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWGR
Sbjct: 312 TEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR 371
Query: 348 SPSN 351
S +N
Sbjct: 372 SQNN 375
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 19/160 (11%)
Query: 204 AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC--STRPMRIGPATNKKTVSASY 261
K++ D+ +G GY FV F + + RA+ ++NG S R ++ A+ S
Sbjct: 101 VKMIRDKFSGSNAGYCFVDFENPDQATRAL-QLNGQVIPNSNRQFKLNWASGGGLADRS- 158
Query: 262 QNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELF-SQYGQLVHVKIPA------GKRCG 314
DD ++FVG+L V + L LF +Y KI + + G
Sbjct: 159 -------RDDRGPEFSIFVGDLGPEVNEYVLMSLFQGKYTSCKSAKIMSDPISGMSRGYG 211
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 354
FV+FAD ++AL + G G + +R+S +P NK
Sbjct: 212 FVRFADEQDQQKALHEMQGVYCGNRPMRISTA-TPKNKSG 250
>gi|328769877|gb|EGF79920.1| hypothetical protein BATDEDRAFT_19794 [Batrachochytrium
dendrobatidis JAM81]
Length = 470
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/299 (40%), Positives = 173/299 (57%), Gaps = 33/299 (11%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+GDL WMDE ++ + GE V VK+I++K TG + GY F+EF S A ++L+
Sbjct: 13 TLWMGDLLPWMDEHFIRQTWRLLGESVTVKMIKDKSTGSLAGYCFVEFSSSDVAAKLLEL 72
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
NGT +P F+LNWA G P+ +IFVGDLA ++ D +L + F RYPS K
Sbjct: 73 VNGTLIPGTHCFFKLNWAFGGGLSPLYVLPEFSIFVGDLAHEINDILLMQVFHERYPSVK 132
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT------ 256
A+VVID TG KGYGFVRFG E++Q +++ ++ G +RP+R+ AT K
Sbjct: 133 SARVVIDPTTGSPKGYGFVRFGSEADQQQSLVDLQGQMIGSRPVRVSIATPKHKALGSNG 192
Query: 257 --------VSASYQNSQVAQ-------------------SDDDPNNTTVFVGNLDSIVTD 289
+ SY ++ A +DP N+T+F+G L + +T+
Sbjct: 193 HGMPGYYPIPPSYMDASGAMIPNSAHMIYRQPVYMHQHLGGNDPTNSTIFIGALPATMTN 252
Query: 290 EHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
+ LR+ F +G++V+ KIP GKRCGFVQF R AE A++ ++G +GG +RLSWGRS
Sbjct: 253 DDLRKHFLPFGEIVYTKIPFGKRCGFVQFIHRQSAEMAIQEMDGKVIGGSALRLSWGRS 311
>gi|449302980|gb|EMC98988.1| hypothetical protein BAUCODRAFT_386817 [Baudoinia compniacensis
UAMH 10762]
Length = 431
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 170/304 (55%), Gaps = 36/304 (11%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+DE ++ + + G V VK+IR+K +G GY F++F + A R LQ
Sbjct: 82 TLWMGELEPWIDENFVRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENTDSAGRALQ- 140
Query: 143 FNGTPMPNGEQNFRLNWASFG--AGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARYP 199
NG +PN + F+LNWAS G A RDD P+++IFVGDL +V +Y+L F+ +Y
Sbjct: 141 LNGQMIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLMSLFQGKYN 200
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S K AK++ D ++G ++GYGFVRF DE +Q +A+ EM GV+C RPMRI AT K
Sbjct: 201 SCKSAKIMSDPISGMSRGYGFVRFSDEQDQQKALHEMQGVYCGNRPMRISTATPKNKSGG 260
Query: 260 SYQNSQVAQSD--------------------------------DDPNNTTVFVGNLDSIV 287
DPNNTTVFVG L V
Sbjct: 261 GGPGMGGMPGGMQPGMYGMGQPPMSGGGGGGGYYPQQQPMNQFTDPNNTTVFVGGLSGYV 320
Query: 288 TDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
T++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWGR
Sbjct: 321 TEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGR 380
Query: 348 SPSN 351
S +N
Sbjct: 381 SQNN 384
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 19/158 (12%)
Query: 204 AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC--STRPMRIGPATNKKTVSASY 261
K++ D+ +G GY FV F + RA+ ++NG S R ++ A+ S
Sbjct: 110 VKMIRDKFSGSNAGYCFVDFENTDSAGRAL-QLNGQMIPNSNRQFKLNWASGGGLADRS- 167
Query: 262 QNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELF-SQYGQLVHVKIPA------GKRCG 314
DD ++FVG+L V + L LF +Y KI + + G
Sbjct: 168 -------RDDRGPEYSIFVGDLGPEVNEYVLMSLFQGKYNSCKSAKIMSDPISGMSRGYG 220
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
FV+F+D ++AL + G G + +R+S +P NK
Sbjct: 221 FVRFSDEQDQQKALHEMQGVYCGNRPMRISTA-TPKNK 257
>gi|290997888|ref|XP_002681513.1| predicted protein [Naegleria gruberi]
gi|284095137|gb|EFC48769.1| predicted protein [Naegleria gruberi]
Length = 292
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 179/294 (60%), Gaps = 24/294 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGE--VVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
RTLW+GDL MD+ Y+ FA+ + +VK+I+++ TG+ GYGF+EF S A+ V
Sbjct: 1 RTLWMGDLDDSMDDEYVKKLFANDIRPSINSVKIIKDRNTGKSIGYGFVEFASIEIAKAV 60
Query: 140 LQTFNGTPMPNG-EQNFRLNWASFGAGEK---------------RDDTPDHTIFVGDLAA 183
L+++ G P+P + +RLNWA+ G +++ +IFVGDLA
Sbjct: 61 LESYAGKPIPTLPNKIYRLNWAAQNQGSNPLFSSQPGGKPSSGGKENIV--SIFVGDLAP 118
Query: 184 DVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST 243
DV DYML++TFR RYPS +GAKVV+D +G +KGYGFV+F DE + +R+MTEM GV+ S+
Sbjct: 119 DVNDYMLEQTFRNRYPSVRGAKVVMDPKSGISKGYGFVKFADEDDMMRSMTEMQGVYISS 178
Query: 244 RPMRIGPATNKKTVSASYQN---SQVAQSD-DDPNNTTVFVGNLDSIVTDEHLRELFSQY 299
RP++I ATN + ++ + + +D + NTTV+VGNL ++ LRE F Y
Sbjct: 179 RPVKISHATNNFKSQGALEDLMPTTIITTDPLEQENTTVYVGNLSPNTDEKILREFFQGY 238
Query: 300 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
G + VKIP CGF+ F AE A+ +NG ++ G +R+SWGR NK+
Sbjct: 239 GPITSVKIPTNSNCGFINFTRTEHAERAIIEMNGIEIQGNRVRVSWGRVQHNKK 292
>gi|298706390|emb|CBJ29399.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 434
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/269 (42%), Positives = 169/269 (62%), Gaps = 10/269 (3%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAH-TGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+TLW+GD+Q E Y+ + F+ G+ + VK+IR++ G + GYGFI+F + A+ VL
Sbjct: 16 KTLWLGDVQPDWTEEYVESLFSSIVGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVL 75
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
+ NG P+ +RLNW GAG KR + P++++FVGDL+ +VTD L+ TF +Y
Sbjct: 76 DSLNGKPIEGTSLRYRLNW---GAGGKRIEQAPEYSVFVGDLSPEVTDAELKATFLGKYT 132
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S GAKVV + +TG +K +GF+RFGDE E+ A+T MNG C RP+R+ PAT + +V
Sbjct: 133 SVLGAKVVTNPMTGSSKSFGFIRFGDEQERDEALTAMNGAECCGRPIRVAPATKRTSVQG 192
Query: 260 SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFA 319
Q DP+NTTVFVG ++ VT++ LR+ F+ G++ V P G+ C FV FA
Sbjct: 193 -----QTGAHATDPSNTTVFVGGINDSVTEKVLRDTFNSAGEIQTVTTPPGRGCAFVTFA 247
Query: 320 DRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
R+ AE + + GT + G +RLSWG+S
Sbjct: 248 HRASAEHVINNMQGTTVCGSCVRLSWGKS 276
>gi|302511659|ref|XP_003017781.1| hypothetical protein ARB_04665 [Arthroderma benhamiae CBS 112371]
gi|291181352|gb|EFE37136.1| hypothetical protein ARB_04665 [Arthroderma benhamiae CBS 112371]
Length = 428
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 173/309 (55%), Gaps = 43/309 (13%)
Query: 86 IGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNG 145
+G+L+ W+DE ++ + GE V VK+IR+K +G GY F++F S A A NG
Sbjct: 85 MGELEGWIDENFIRNIWYQMGEQVNVKMIRDKFSGANAGYCFVDFASPA-AAAKALAVNG 143
Query: 146 TPMPNGEQNFRLNWASFGAGEKR---DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
TPMPN ++ F+LNWAS G R + P+ +IFVGDL +V +Y+L F++R+PS K
Sbjct: 144 TPMPNTQRPFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSLFQSRFPSCK 203
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS-- 260
AK++ D +TG ++GYGFVRF DE++Q RA++EM GV+C RPMRI AT K A
Sbjct: 204 SAKIMTDPITGLSRGYGFVRFSDETDQQRALSEMQGVYCGNRPMRISTATPKNKGPAGPG 263
Query: 261 -----------------------------------YQNS--QVAQSDDDPNNTTVFVGNL 283
Y + Q DPNNTTVFVG L
Sbjct: 264 GPAHMGVPGGPPGGMYPPSMGGAGGPPGPGGPQMGYYGAAPQPMNQFTDPNNTTVFVGGL 323
Query: 284 DSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRL 343
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RL
Sbjct: 324 SGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRL 383
Query: 344 SWGRSPSNK 352
SWGRS +N
Sbjct: 384 SWGRSQNNS 392
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L ++ E L + F GE+ VK+ K G GF++F+ R AE +
Sbjct: 317 TVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVQRHAAEMAINQ 370
Query: 143 FNGTPMPNGEQNFRLNWA 160
G P+ G RL+W
Sbjct: 371 MQGYPI--GNSRVRLSWG 386
>gi|162312303|ref|NP_596601.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe
972h-]
gi|26401571|sp|O60176.2|YG41_SCHPO RecName: Full=Uncharacterized RNA-binding protein C23E6.01c
gi|157310462|emb|CAB83010.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe]
Length = 473
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 115/283 (40%), Positives = 162/283 (57%), Gaps = 18/283 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+ E ++ + G+ V VK+IRN+ TG GY F+EF S A + +
Sbjct: 94 TLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAM-S 152
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N P+P F+LNWAS G ++ +++IFVGDL+ +V ++ + F +RY S
Sbjct: 153 MNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYNS 212
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
K AK++ D T ++GYGFVRF DE++Q A+ EM G C RP+R+G AT K
Sbjct: 213 CKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLATPKSKAHVF 272
Query: 261 ---------------YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 305
Y +Q D N+TVFVG L V++E L+ LF +G++V+V
Sbjct: 273 SPVNVVPVSMPPVGFYSAAQPVPQFADTANSTVFVGGLSKFVSEEELKYLFQNFGEIVYV 332
Query: 306 KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
KIP GK CGFVQF +R AE A+ L G LG IRLSWGR+
Sbjct: 333 KIPPGKGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWGRN 375
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Query: 148 MPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVV 207
M + E N +++G+ + T+++G+L VT+ +Q+ + + K K++
Sbjct: 67 MASNESGNSENTSNYGSSRDENVYQKTTLWMGELEPWVTEAFIQQVWNTLGKAVK-VKLI 125
Query: 208 IDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM-----RIGPATNKKTVSASYQ 262
+R TG GY FV F E AM+ N T + G +K++S + +
Sbjct: 126 RNRYTGMNAGYCFVEFASPHEASSAMSMNNKPIPGTNHLFKLNWASGGGLREKSISKASE 185
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELF-SQYGQLVHVKI------PAGKRCGF 315
S +FVG+L V + + LF S+Y KI + GF
Sbjct: 186 YS-------------IFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGF 232
Query: 316 VQFADRSCAEEALRMLNGTQLGGQNIRL 343
V+F D + + AL + G G + IR+
Sbjct: 233 VRFTDENDQKSALAEMQGQICGDRPIRV 260
>gi|19115155|ref|NP_594243.1| RNA-binding protein Csx1 [Schizosaccharomyces pombe 972h-]
gi|3121946|sp|O13759.1|CSX1_SCHPO RecName: Full=RNA-binding post-transcriptional regulator csx1
gi|2656019|emb|CAB16569.1| RNA-binding protein Csx1 [Schizosaccharomyces pombe]
Length = 632
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 167/284 (58%), Gaps = 20/284 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQ--IEGYGFIEFISRAGAERVL 140
TLW+GDL+ WMD T++ +A E V VKV+R+K + + Y F++F S A AER L
Sbjct: 86 TLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERAL 145
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDD----TPDHTIFVGDLAADVTDYMLQETFRA 196
+N T +P F+LNWA+ G G + ++ P+ +IFVGDL D L TFR+
Sbjct: 146 MKYNNTMIPGAHCTFKLNWAT-GGGIQHNNFVSRDPEFSIFVGDLLPTTEDSDLFMTFRS 204
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
YPS AK+++D +TG ++ YGFVRF E EQ A+ M G C RP+RI A+ K
Sbjct: 205 IYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRISVASPKSR 264
Query: 257 VS-----------ASYQNSQVAQ--SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
S S N Q Q DP NTTVFVG L S ++++ L+ F +G+++
Sbjct: 265 ASIAADSALGIVPTSTSNRQPNQDLCSMDPLNTTVFVGGLASNLSEKDLQVCFQPFGRIL 324
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
++KIP GK CGFVQ++++S AE+A+ + G +G +IRL+WG
Sbjct: 325 NIKIPFGKGCGFVQYSEKSAAEKAINTMQGALVGTSHIRLAWGH 368
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 85/214 (39%), Gaps = 31/214 (14%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
++++GDL +++ L F + K+I + TG YGF+ F S + L
Sbjct: 183 SIFVGDLLPTTEDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALM 242
Query: 142 TFNGTPMPNGEQNFRL----NWASFGAGEKRDDTP------------------DHTIFVG 179
G + + AS A P + T+FVG
Sbjct: 243 HMQGYLCQGRPLRISVASPKSRASIAADSALGIVPTSTSNRQPNQDLCSMDPLNTTVFVG 302
Query: 180 DLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV 239
LA+++++ LQ F+ P + + I KG GFV++ ++S +A+ M G
Sbjct: 303 GLASNLSEKDLQVCFQ---PFGRILNIKIPF----GKGCGFVQYSEKSAAEKAINTMQGA 355
Query: 240 FCSTRPMRIGPATNKKTVSASYQN-SQVAQSDDD 272
T +R+ N VSA Q+ SQV+ D
Sbjct: 356 LVGTSHIRLAWGHNTLPVSALSQSQSQVSDEGFD 389
>gi|361131740|gb|EHL03392.1| putative Uncharacterized RNA-binding protein C23E6.01c [Glarea
lozoyensis 74030]
Length = 391
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 120/308 (38%), Positives = 162/308 (52%), Gaps = 62/308 (20%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+DE ++ + + GE V VK+IR+K +G GY FI+F S A A + L +
Sbjct: 74 TLWMGELEPWIDENFIRSVWFGMGEQVNVKMIRDKFSGN-AGYCFIDFSSPAAAAKAL-S 131
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
NG D P+ +IFVGDL +V +Y+L F+AR+PS K
Sbjct: 132 LNGD----------------------DRGPEFSIFVGDLGPEVNEYVLVSLFQARFPSCK 169
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS-- 260
AK++ D ++G ++GYGFVRF DE +Q RA+TEM GV+C RPMRI AT K +
Sbjct: 170 SAKIMTDPISGMSRGYGFVRFADEQDQQRALTEMQGVYCGNRPMRISTATPKNKSGGAGG 229
Query: 261 ------------------------------------YQNSQVAQSDDDPNNTTVFVGNLD 284
Y Q DPNNTTVFVG L
Sbjct: 230 PAGMPMQGGGGMGGGQPGGMGAPGMYSMGAPPQLGYYGAPQPMNQFTDPNNTTVFVGGLS 289
Query: 285 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 344
VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLS
Sbjct: 290 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLS 349
Query: 345 WGRSPSNK 352
WGRS +N
Sbjct: 350 WGRSQNNS 357
>gi|213406019|ref|XP_002173781.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
gi|212001828|gb|EEB07488.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
Length = 680
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/337 (36%), Positives = 182/337 (54%), Gaps = 51/337 (15%)
Query: 57 ATQAAAPQAAGVAVPP---QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKV 113
++++A+P A G+ PP +P + TLW+GDL+ WMD ++ +A GE V VK+
Sbjct: 63 SSRSASPAAYGL--PPLSFSADHKPND--TLWMGDLESWMDAAFIQQLWASLGETVHVKL 118
Query: 114 IRNKQTGQIEG---YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDD 170
+R K + EG Y F++F S AE L +N T +P F+LNWA+ G +
Sbjct: 119 MRTKSSVS-EGCVSYCFVQFSSPQAAEYALLRYNNTIIPRTHSVFKLNWATGGGIQHSAK 177
Query: 171 T---PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
T P++++FVGDL + + L TF + YPS AK++ID +TG ++ YGFVRF DE
Sbjct: 178 TRREPEYSVFVGDLDPETHEAELYHTFHSVYPSCTSAKIIIDPVTGMSRKYGFVRFSDER 237
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS--------------------------- 260
EQ RA++EM G C RP+RI A+ + S S
Sbjct: 238 EQQRALSEMQGYLCHGRPLRISVASPRSRTSISADSTTPTGAASTANGGAAASSSAVATG 297
Query: 261 -----YQNSQVAQSDD-----DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG 310
+S Q D DP NTTVFVG L S T++ L FS +G ++++KIP G
Sbjct: 298 VTGVPSSSSSTRQPDQGLCSIDPFNTTVFVGGLFSGATEKDLFYHFSPFGNILNIKIPPG 357
Query: 311 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
K CGFVQ+ +++ AE+A+ M+ G +G +IRL+WG
Sbjct: 358 KGCGFVQYTEKAAAEKAITMMQGALVGPSHIRLAWGH 394
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 247 RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 306
R G +++ A+Y ++ S D N T+++G+L+S + +++L++ G+ VHVK
Sbjct: 58 RDGNGSSRSASPAAYGLPPLSFSADHKPNDTLWMGDLESWMDAAFIQQLWASLGETVHVK 117
Query: 307 IPAGKR-----C---GFVQFADRSCAEEALRMLNGTQLGGQN--IRLSW 345
+ K C FVQF+ AE AL N T + + +L+W
Sbjct: 118 LMRTKSSVSEGCVSYCFVQFSSPQAAEYALLRYNNTIIPRTHSVFKLNW 166
>gi|297737425|emb|CBI26626.3| unnamed protein product [Vitis vinifera]
Length = 224
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 113/156 (72%), Positives = 131/156 (83%), Gaps = 1/156 (0%)
Query: 248 IGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 307
+G + + +S+QN+Q Q + DPNNTT+FVG LDS VTD++LR++FSQYG+LVHVKI
Sbjct: 24 VGNFASNFQLFSSFQNTQGNQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKI 83
Query: 308 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYG 367
P GKRCGFVQFA+R+CAE+AL LNGTQLG Q+IRLSWGRSPSNKQAQPD QWN GYYG
Sbjct: 84 PVGKRCGFVQFANRACAEQALAGLNGTQLGAQSIRLSWGRSPSNKQAQPDQAQWNGGYYG 143
Query: 368 YAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQ 403
YAQGYE YGY A PQDP+MYYG YPGYGNYQQPQQ
Sbjct: 144 YAQGYEAYGY-APPPQDPNMYYGAYPGYGNYQQPQQ 178
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 12/89 (13%)
Query: 75 QGQPGEI----RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
QG GE T+++G L + + YL F+ GE+V VK+ K+ GF++F
Sbjct: 41 QGNQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRC------GFVQF 94
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNW 159
+RA AE+ L NGT + G Q+ RL+W
Sbjct: 95 ANRACAEQALAGLNGTQL--GAQSIRLSW 121
>gi|212722006|ref|NP_001131810.1| uncharacterized protein LOC100193183 [Zea mays]
gi|194692604|gb|ACF80386.1| unknown [Zea mays]
Length = 236
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 130/199 (65%), Gaps = 20/199 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R+LWIG L WMDE YL CF + E++++ + RNKQTGQ EG+GF++F A +L+
Sbjct: 37 RSLWIGGLLPWMDEDYLYGCFTTSRELLSLVIKRNKQTGQSEGFGFLKFSDHTAAAHILK 96
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKR--------------------DDTPDHTIFVGDL 181
++NG MPN Q+F+LNWA+ K+ D + DH+IFVGDL
Sbjct: 97 SYNGQKMPNAVQDFKLNWATQQPAPKKLPDPDFKLDLATQQERHAAVDSSSDHSIFVGDL 156
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
A +VT YML F+ARYPS K AK++ D+ TG +K YGFV+FGD EQ++A+TEMNG +C
Sbjct: 157 AYNVTGYMLHHVFKARYPSVKSAKIIFDKFTGLSKCYGFVQFGDVDEQIQALTEMNGAYC 216
Query: 242 STRPMRIGPATNKKTVSAS 260
STRPMRIGP KK+ A+
Sbjct: 217 STRPMRIGPVPKKKSAYAT 235
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 206 VVIDR--LTGRTKGYGFVRFGDESEQLRAMTEMNG--VFCSTRPMRIGPATN----KKTV 257
+VI R TG+++G+GF++F D + + NG + + + ++ AT KK
Sbjct: 66 LVIKRNKQTGQSEGFGFLKFSDHTAAAHILKSYNGQKMPNAVQDFKLNWATQQPAPKKLP 125
Query: 258 SASYQNSQVAQSD-----DDPNNTTVFVGNLDSIVTDEHLRELFS------QYGQLVHVK 306
++ Q + D ++ ++FVG+L VT L +F + +++ K
Sbjct: 126 DPDFKLDLATQQERHAAVDSSSDHSIFVGDLAYNVTGYMLHHVFKARYPSVKSAKIIFDK 185
Query: 307 IPAGKRC-GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 354
+C GFVQF D +AL +NG + +R+ G P K A
Sbjct: 186 FTGLSKCYGFVQFGDVDEQIQALTEMNGAYCSTRPMRI--GPVPKKKSA 232
>gi|242042652|ref|XP_002459197.1| hypothetical protein SORBIDRAFT_02g000370 [Sorghum bicolor]
gi|241922574|gb|EER95718.1| hypothetical protein SORBIDRAFT_02g000370 [Sorghum bicolor]
Length = 238
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 133/199 (66%), Gaps = 23/199 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R+LWIG L +WMDE YL CF + E+++V + R+KQTGQ EG+GF+ F A ++L+
Sbjct: 36 RSLWIGGLLHWMDEDYLYACFTTSPELLSVVIRRSKQTGQSEGFGFLNFADHTTAAQILK 95
Query: 142 TFNGTPMPNGEQNFRLNWAS------------FGAG--------EKRDD---TPDHTIFV 178
++NG MPN Q+F+LNWA+ F ++ DD + +H IFV
Sbjct: 96 SYNGHKMPNSVQDFKLNWATQQPAPDKLPDPHFKLDPAMQQDVPQRHDDDNSSSEHFIFV 155
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDLA DVT+YML F+ RY S K AK+++DR TGR+KGYGFV+FGD +EQ +A+TEMNG
Sbjct: 156 GDLAYDVTEYMLHHLFKTRYASVKRAKIIVDRFTGRSKGYGFVQFGDVNEQTQALTEMNG 215
Query: 239 VFCSTRPMRIGPATNKKTV 257
+CSTRPMRIGP NKK+
Sbjct: 216 AYCSTRPMRIGPVPNKKST 234
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 29/176 (16%)
Query: 206 VVIDRL--TGRTKGYGFVRFGDESEQLRAMTEMNG--VFCSTRPMRIGPATNK------- 254
VVI R TG+++G+GF+ F D + + + NG + S + ++ AT +
Sbjct: 65 VVIRRSKQTGQSEGFGFLNFADHTTAAQILKSYNGHKMPNSVQDFKLNWATQQPAPDKLP 124
Query: 255 ----KTVSASYQNSQVAQSDDDPNNTT---VFVGNLDSIVTDEHLRELF-SQYGQLVHVK 306
K A Q+ V Q DD N+++ +FVG+L VT+ L LF ++Y + K
Sbjct: 125 DPHFKLDPAMQQD--VPQRHDDDNSSSEHFIFVGDLAYDVTEYMLHHLFKTRYASVKRAK 182
Query: 307 IPA------GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP 356
I K GFVQF D + +AL +NG + +R+ G P+ K P
Sbjct: 183 IIVDRFTGRSKGYGFVQFGDVNEQTQALTEMNGAYCSTRPMRI--GPVPNKKSTYP 236
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 277 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRM 330
++++G L + +++L F+ +L+ V I K+ G F+ FAD + A + L+
Sbjct: 37 SLWIGGLLHWMDEDYLYACFTTSPELLSVVIRRSKQTGQSEGFGFLNFADHTTAAQILKS 96
Query: 331 LNGTQL--GGQNIRLSWGRSPSNKQAQPDPN 359
NG ++ Q+ +L+W PDP+
Sbjct: 97 YNGHKMPNSVQDFKLNWATQQPAPDKLPDPH 127
>gi|413918498|gb|AFW58430.1| nucleic acid binding protein, partial [Zea mays]
Length = 241
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 94/145 (64%), Positives = 114/145 (78%), Gaps = 1/145 (0%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E +T+W+GDLQYWMDE YL+ CF +GEVV +KVIRN+QTGQ EGYGF+EF S A AE+
Sbjct: 97 ENKTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKA 156
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198
LQ F G MPN ++ F+LNWAS+ GEKR + DH+IFVGDLAADVTD ML E F ++Y
Sbjct: 157 LQNFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKY 216
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRF 223
S KGAKV+ID TGR++GYGFVRF
Sbjct: 217 RSVKGAKVIIDANTGRSRGYGFVRF 241
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 24/157 (15%)
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTK--GAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ TI+VGDL + + L F PS + KV+ +R TG+++GYGFV F +
Sbjct: 98 NKTIWVGDLQYWMDENYLHNCFG---PSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAE 154
Query: 231 RAMTEMNGVFC--STRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
+A+ G + RP ++ N + S + S+VA ++ ++FVG+L + VT
Sbjct: 155 KALQNFTGHVMPNTDRPFKL----NWASYSMGEKRSEVA------SDHSIFVGDLAADVT 204
Query: 289 DEHLRELFSQ-----YGQLVHVKIPAGKR--CGFVQF 318
DE L ELFS G V + G+ GFV+F
Sbjct: 205 DEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRF 241
>gi|407925486|gb|EKG18497.1| hypothetical protein MPH_04299 [Macrophomina phaseolina MS6]
Length = 311
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 112/259 (43%), Positives = 148/259 (57%), Gaps = 31/259 (11%)
Query: 124 GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDT-PDHTIFVGDL 181
GY F++F + A + L T NG +PN + F+LNWAS G ++RDD P+++IFVGDL
Sbjct: 17 GYCFVDFQTPEAAAKAL-TLNGQMIPNSNRPFKLNWASGGGLQDRRDDRGPEYSIFVGDL 75
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
+V +Y+L F+ +YPS K AK++ D ++G ++GYGFVRF DESEQ RA+ EM GV+C
Sbjct: 76 GPEVNEYVLVSLFQGKYPSCKSAKIMSDPISGMSRGYGFVRFSDESEQQRALNEMQGVYC 135
Query: 242 STRPMRIGPATNKKTVSAS----------------------------YQNSQVAQSDDDP 273
RPMRI AT K Y Q DP
Sbjct: 136 GNRPMRISTATPKNKSGGGPGAGPMGGMHGGPGPVGMYGMGAPPLGYYGAPQPMNQFTDP 195
Query: 274 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG 333
NNTTVFVG L VT++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G
Sbjct: 196 NNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQG 255
Query: 334 TQLGGQNIRLSWGRSPSNK 352
+G +RLSWGRS +N
Sbjct: 256 YPIGNSRVRLSWGRSQNNS 274
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L ++ E L + F GE+ VK+ K G GF++F+ R AE +
Sbjct: 199 TVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVQRHAAEMAINQ 252
Query: 143 FNGTPMPNGEQNFRLNWA 160
G P+ G RL+W
Sbjct: 253 MQGYPI--GNSRVRLSWG 268
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 20/151 (13%)
Query: 211 LTGRTKGYGFVRFGDESEQLRAMTEMNGVFC--STRPMRIGPATNKKTVSASYQNSQVAQ 268
+ GY FV F +A+T +NG S RP ++ A+ Q+ +
Sbjct: 11 VCSNNAGYCFVDFQTPEAAAKALT-LNGQMIPNSNRPFKLNWAS-----GGGLQDRR--- 61
Query: 269 SDDDPNNTTVFVGNLDSIVTDEHLRELF-SQYGQLVHVKIPA------GKRCGFVQFADR 321
DD ++FVG+L V + L LF +Y KI + + GFV+F+D
Sbjct: 62 -DDRGPEYSIFVGDLGPEVNEYVLVSLFQGKYPSCKSAKIMSDPISGMSRGYGFVRFSDE 120
Query: 322 SCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
S + AL + G G + +R+S +P NK
Sbjct: 121 SEQQRALNEMQGVYCGNRPMRISTA-TPKNK 150
>gi|302307679|ref|NP_984403.2| ADR307Wp [Ashbya gossypii ATCC 10895]
gi|299789115|gb|AAS52227.2| ADR307Wp [Ashbya gossypii ATCC 10895]
Length = 566
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/308 (40%), Positives = 165/308 (53%), Gaps = 50/308 (16%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
L++GDL E + +A GE V VK+I+N G GY F+EF S A L
Sbjct: 54 LYMGDLDPSWTEGDIKQIWATLGEANVQVKLIKNSSGGGNSGYCFVEFPSNLAATNALLK 113
Query: 143 FNGTPMP-NGEQNFRLNWASFGAGEKRDDTP--DHTIFVGDLAADVTDYMLQETFRARYP 199
G P+P + + +LNWASF TP + +IFVGDLA +VT+ L E F +RY
Sbjct: 114 -TGLPIPVDASRTLKLNWASFAT------TPGSEFSIFVGDLAPNVTESQLFELFISRYS 166
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT--- 256
ST AK+V D+ TG +KGYGFV+FG+E+EQ R++ EM GVF + R +R+ + K+
Sbjct: 167 STLNAKIVFDQGTGVSKGYGFVKFGNEAEQQRSLLEMQGVFLNGRAIRVSTTSKNKSRFQ 226
Query: 257 ---------------------------VSASYQNSQ---------VAQSDDDPNNTTVFV 280
V Q SQ DPNNTTVF+
Sbjct: 227 SGNPASAAPASPASTAVNSPGLAQGSNVQTLLQQSQFIYPVQQQPALSQFADPNNTTVFI 286
Query: 281 GNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQN 340
G L S+VT++ LR F +GQ+V+VKIP GK CGFVQ+ DRS AE A+ + G +G
Sbjct: 287 GGLSSLVTEDELRAYFQPFGQIVYVKIPVGKGCGFVQYVDRSSAENAIAKMQGFPIGNSR 346
Query: 341 IRLSWGRS 348
+RLSWGRS
Sbjct: 347 VRLSWGRS 354
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T++IG L + E L F G++V VK+ K G GF++++ R+ AE +
Sbjct: 283 TVFIGGLSSLVTEDELRAYFQPFGQIVYVKIPVGK------GCGFVQYVDRSSAENAIAK 336
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 337 MQGFPI--GNSRVRLSW 351
>gi|374107618|gb|AEY96526.1| FADR307Wp [Ashbya gossypii FDAG1]
Length = 565
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/308 (40%), Positives = 165/308 (53%), Gaps = 50/308 (16%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
L++GDL E + +A GE V VK+I+N G GY F+EF S A L
Sbjct: 54 LYMGDLDPSWTEGDIKQIWATLGEANVQVKLIKNSSGGGNSGYCFVEFPSNLAATNALLK 113
Query: 143 FNGTPMP-NGEQNFRLNWASFGAGEKRDDTP--DHTIFVGDLAADVTDYMLQETFRARYP 199
G P+P + + +LNWASF TP + +IFVGDLA +VT+ L E F +RY
Sbjct: 114 -TGLPIPVDASRTLKLNWASFAT------TPGSEFSIFVGDLAPNVTESQLFELFISRYS 166
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT--- 256
ST AK+V D+ TG +KGYGFV+FG+E+EQ R++ EM GVF + R +R+ + K+
Sbjct: 167 STLNAKIVFDQGTGVSKGYGFVKFGNEAEQQRSLLEMQGVFLNGRAIRVSTTSKNKSRFQ 226
Query: 257 ---------------------------VSASYQNSQ---------VAQSDDDPNNTTVFV 280
V Q SQ DPNNTTVF+
Sbjct: 227 SGNPASAAPASPASTAVNSPGLAQGSNVQTLLQQSQFIYPVQQQPALSQFADPNNTTVFI 286
Query: 281 GNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQN 340
G L S+VT++ LR F +GQ+V+VKIP GK CGFVQ+ DRS AE A+ + G +G
Sbjct: 287 GGLSSLVTEDELRAYFQPFGQIVYVKIPVGKGCGFVQYVDRSSAENAIAKMQGFPIGNSR 346
Query: 341 IRLSWGRS 348
+RLSWGRS
Sbjct: 347 VRLSWGRS 354
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T++IG L + E L F G++V VK+ K G GF++++ R+ AE +
Sbjct: 283 TVFIGGLSSLVTEDELRAYFQPFGQIVYVKIPVGK------GCGFVQYVDRSSAENAIAK 336
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 337 MQGFPI--GNSRVRLSW 351
>gi|363755816|ref|XP_003648124.1| hypothetical protein Ecym_8010 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891324|gb|AET41307.1| Hypothetical protein Ecym_8010 [Eremothecium cymbalariae
DBVPG#7215]
Length = 602
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/309 (39%), Positives = 165/309 (53%), Gaps = 49/309 (15%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
L++GDL E + +A GE V VK+I+N GY F+EF S A L
Sbjct: 55 LYMGDLDASWTENDIKQIWATLGEPNVQVKLIKNSGPMNNSGYCFVEFPSNLSATNALLK 114
Query: 143 FNGTPMP-NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
G P+P + ++ +LNWASF + +IFVGDLA +V++ L E F +RY ST
Sbjct: 115 -TGLPIPVDPSRSLKLNWASFATAPGTE----FSIFVGDLAPNVSESQLFELFISRYSST 169
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT----- 256
AK+V D++TG +KGYGFV+FG+E+EQ R++ EM GVF + R +R+ + K+
Sbjct: 170 LNAKIVFDQVTGVSKGYGFVKFGNEAEQQRSLVEMQGVFLNGRAIRVSTTSKNKSRFRGG 229
Query: 257 -------------------VSASYQNSQ------------------VAQSDDDPNNTTVF 279
+S Q S V DPNNTTVF
Sbjct: 230 LSGTVTSAAAATAGPPVGNLSGVIQTSSPQTLPQQSQFIYPVQQQPVLSQFTDPNNTTVF 289
Query: 280 VGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQ 339
+G L S+VT+E LR F +GQ+V+VKIP GK CGFVQ+ DRS AE A+ + G +G
Sbjct: 290 IGGLSSLVTEEELRAYFQPFGQIVYVKIPVGKGCGFVQYVDRSSAENAIAKMQGFPIGNS 349
Query: 340 NIRLSWGRS 348
IRLSWGRS
Sbjct: 350 RIRLSWGRS 358
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 20/182 (10%)
Query: 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
+T +++GDL A T+ +++ + K++ + GY FV F
Sbjct: 49 ETTSTQLYMGDLDASWTENDIKQIWATLGEPNVQVKLIKNSGPMNNSGYCFVEFPSN--- 105
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTD 289
++ N + + P+ + P+ + K AS+ + + ++FVG+L V++
Sbjct: 106 ---LSATNALLKTGLPIPVDPSRSLKLNWASFATAPGTE-------FSIFVGDLAPNVSE 155
Query: 290 EHLRELF-SQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
L ELF S+Y ++ KI K GFV+F + + + +L + G L G+ IR
Sbjct: 156 SQLFELFISRYSSTLNAKIVFDQVTGVSKGYGFVKFGNEAEQQRSLVEMQGVFLNGRAIR 215
Query: 343 LS 344
+S
Sbjct: 216 VS 217
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T++IG L + E L F G++V VK+ K G GF++++ R+ AE +
Sbjct: 287 TVFIGGLSSLVTEEELRAYFQPFGQIVYVKIPVGK------GCGFVQYVDRSSAENAIAK 340
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 341 MQGFPI--GNSRIRLSW 355
>gi|125586871|gb|EAZ27535.1| hypothetical protein OsJ_11490 [Oryza sativa Japonica Group]
Length = 171
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 102/155 (65%), Positives = 123/155 (79%), Gaps = 3/155 (1%)
Query: 246 MRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 305
MR+ + +++++YQN+Q SD DPNNTTVFVG LD VTDE L++ FS YG+LV+V
Sbjct: 3 MRLTTSIVHVSLTSTYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYV 62
Query: 306 KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGY 365
KIP GKRCGFVQ+++R+ AEEA+RMLNG+QLGGQ+IRLSWGRSP NKQ Q D NQWNAGY
Sbjct: 63 KIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQDQNQWNAGY 122
Query: 366 YGY-AQGYENYGYAAAAPQDPSMY-YGGYPGYGNY 398
YGY QGY+ YGY PQDP+MY Y YPGYGNY
Sbjct: 123 YGYPPQGYDPYGY-VRPPQDPAMYAYAAYPGYGNY 156
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + + L F+ GE+V VK+ K+ G F+++ +RA AE ++
Sbjct: 34 TVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCG------FVQYSNRASAEEAIRM 87
Query: 143 FNGTPMPNGEQNFRLNWA 160
NG+ + G Q+ RL+W
Sbjct: 88 LNGSQL--GGQSIRLSWG 103
>gi|414592072|tpg|DAA42643.1| TPA: hypothetical protein ZEAMMB73_369374 [Zea mays]
Length = 235
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 129/199 (64%), Gaps = 21/199 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R+LWIG L WMDE YL CF + E++++ + RNKQTGQ EG+GF++F A +L+
Sbjct: 37 RSLWIGGLLPWMDEDYLYGCFTTSRELLSLVIKRNKQTGQSEGFGFLKFSDHTAAAHILK 96
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKR--------------------DDTPDHTIFVGDL 181
++NG MPN Q+F+LNWA+ K+ D + DH+IFVGDL
Sbjct: 97 SYNGQKMPNAVQDFKLNWATQQPAPKKLPDPDFKLDLATQQERHAAVDSSSDHSIFVGDL 156
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
A +VT YML F+ARYPS K AK++ D+ TG +K YGFV+FGD EQ++ +TEMNG +C
Sbjct: 157 AYNVTGYMLHHVFKARYPSVKSAKIIFDKFTGLSKCYGFVQFGDVDEQIQ-LTEMNGAYC 215
Query: 242 STRPMRIGPATNKKTVSAS 260
STRPMRIGP KK+ A+
Sbjct: 216 STRPMRIGPVPKKKSAYAT 234
>gi|320584167|gb|EFW98378.1| RNA-binding post-transcriptional regulator csx1 [Ogataea
parapolymorpha DL-1]
Length = 485
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 134/343 (39%), Positives = 187/343 (54%), Gaps = 47/343 (13%)
Query: 45 PPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYL----NT 100
P + A PPA TQ++ Q G + Q P LW+GDL DET + ++
Sbjct: 14 PNKSSASPPASQYTQSS--QLNGQSNGQQNAQTP----QLWMGDLDQRWDETTIKQIWSS 67
Query: 101 CFAHTGEVV-AVKVIRNKQTGQIE----GYGFIEFISRAGAERVLQTFNGTPMP--NGEQ 153
A G +V +VK+IR+KQ+ +E GY FI F + +VL+ FNG P+P N +
Sbjct: 68 VLAPLGILVHSVKLIRDKQSMNLELANAGYCFIRFHNFEDCYKVLELFNGKPIPGTNNVR 127
Query: 154 NFRLNWASFGAGEKRDDT------PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVV 207
FRLNW+S + +++IFVGDL VT+ L + F+ARYPS GAKV+
Sbjct: 128 FFRLNWSSANSSGANATAFQPKGQSEYSIFVGDLPQTVTEQSLLQAFQARYPSCSGAKVM 187
Query: 208 IDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA-------- 259
ID TG KGYGFV+F +E++Q RA+ EM G RP+R+ A+ +T +A
Sbjct: 188 IDPATGHLKGYGFVKFLNETDQKRALIEMQGYVLLGRPIRVSTASKSQTNAAANSSFASA 247
Query: 260 ---------------SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 304
S + Q +DPNNTTVF+G L+ +++ LR LFS+YG + +
Sbjct: 248 MPSQDGLGQLKVNVPSLPQTAPLQYYNDPNNTTVFIGGLNVPISEMQLRALFSRYGDISY 307
Query: 305 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQL-GGQNIRLSWG 346
VKIP GK CGFVQF R+ AE A+ + G + GG IR+SWG
Sbjct: 308 VKIPPGKNCGFVQFFHRASAEMAISEMQGYDIGGGCRIRVSWG 350
>gi|320580282|gb|EFW94505.1| RNA binding protein [Ogataea parapolymorpha DL-1]
Length = 398
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/311 (36%), Positives = 169/311 (54%), Gaps = 32/311 (10%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE-----GY 125
PP+ RTLW+GD++ W +E ++ +A T + V VKVI+ +Q + GY
Sbjct: 17 PPENPANTVPSRTLWMGDIEPWWNEEFITDVWAKTNKRVLVKVIKPRQNALVHQLAHSGY 76
Query: 126 GFIEFISRAGAERVLQTFNGTPMPNG-EQNFRLNWASFGA-GEKRDDTPDHTIFVGDLAA 183
F+EF + A+ L+ NGT +PN ++ FRLNWAS + TP++++FVGDL+
Sbjct: 77 CFVEFETPEDAKEALK-LNGTIIPNTTDKLFRLNWASAATLNSQIAQTPEYSLFVGDLSP 135
Query: 184 DVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST 243
T+ L F+ + + K +V+ D TG ++ +GFVRF + ++ +A+ EMNG +
Sbjct: 136 ATTEAHLLALFQTHFSTVKTVRVMTDPATGLSRCFGFVRFSSDEDRQKALVEMNGKWLDG 195
Query: 244 RPMRIGPATNKKTVSASYQNSQVAQSDD-----------------------DPNNTTVFV 280
R +R+ AT K + ++ Q+ D DP NTTVFV
Sbjct: 196 RLIRVALATPKHQ-NQQFRKHQIPMELDPYHAPGLPPIGYYAAPQPPPAYSDPTNTTVFV 254
Query: 281 GNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQN 340
G L + +T+ L +F YGQ+VHVK+P GK CGFV+F R+ AE A+ L G + G
Sbjct: 255 GGLSNNITEATLLSIFEPYGQIVHVKVPPGKGCGFVKFTQRTDAERAIEQLQGYVIDGSR 314
Query: 341 IRLSWGRSPSN 351
+RLSWGRS N
Sbjct: 315 VRLSWGRSNRN 325
>gi|255714705|ref|XP_002553634.1| KLTH0E03520p [Lachancea thermotolerans]
gi|238935016|emb|CAR23197.1| KLTH0E03520p [Lachancea thermotolerans CBS 6340]
Length = 516
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/313 (39%), Positives = 167/313 (53%), Gaps = 48/313 (15%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEG-YGFIEFISRAGAERVL 140
+L++GDL DE + +A+ GE V VK+IRN + Y F+EF S A L
Sbjct: 44 SLYMGDLDPSWDENAIRAVWANLGEPNVQVKLIRNSGSTGGSSGYCFVEFPSHLNASNAL 103
Query: 141 QTFNGTPMPNGEQNF-RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG +PN + +LNWASF + H++FVGD+A +V++ L E F +RY
Sbjct: 104 LK-NGLLIPNARNRYLKLNWASFATAPGNE----HSVFVGDIAPNVSEAQLFELFISRYA 158
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI----------- 248
ST AK+V D++TG +KGYGFV+FG ESEQ RA+ EM GVF + R +R+
Sbjct: 159 STLNAKIVFDQMTGVSKGYGFVKFGQESEQQRALLEMQGVFLNGRAVRVSTTSKNRSKFQ 218
Query: 249 -----------------------GPATNKKTVSASY----QNSQVAQSDDDPNNTTVFVG 281
PA N V + + Q DPNNTTVF+G
Sbjct: 219 QPLQQQQQPYMQQQQPYVQQQARAPAFNNGNVQSQFIYPVQQQPTLTQYTDPNNTTVFIG 278
Query: 282 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
L S+V+++ LR F +G +V+VKIP GK CGFVQ+ DR AE A+ + G +G I
Sbjct: 279 GLSSLVSEDELRAYFQPFGSIVYVKIPVGKGCGFVQYVDRISAETAIAKMQGYPIGNSRI 338
Query: 342 RLSWGRSPSNKQA 354
RLSWGRS KQA
Sbjct: 339 RLSWGRSA--KQA 349
>gi|449472161|ref|XP_004153512.1| PREDICTED: polyadenylate-binding protein RBP45-like, partial
[Cucumis sativus]
Length = 176
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 95/123 (77%), Positives = 104/123 (84%), Gaps = 3/123 (2%)
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
P Q E+RTLWIGDLQYWMDE Y+ CFAHTGEV +VKVIRNKQTGQ EGYGFIEF+
Sbjct: 56 PPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFL 115
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYML 190
+R AERVLQT+NGT MPNG QNFRLNWAS AGEKR DD+PD+TIFVGDLA DVTDY+L
Sbjct: 116 TRPAAERVLQTYNGTAMPNGAQNFRLNWAS--AGEKRQDDSPDYTIFVGDLAGDVTDYVL 173
Query: 191 QET 193
QET
Sbjct: 174 QET 176
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 277 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRM 330
T+++G+L + + ++ F+ G++ VK+ K+ G F++F R AE L+
Sbjct: 67 TLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQT 126
Query: 331 LNGTQL--GGQNIRLSWGRSPSNKQ 353
NGT + G QN RL+W + +Q
Sbjct: 127 YNGTAMPNGAQNFRLNWASAGEKRQ 151
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
T+++GDL + + + F A KV+ ++ TG+++GYGF+ F R +
Sbjct: 66 RTLWIGDLQYWMDENYIFNCF-AHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVL 124
Query: 234 TEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
NG M G + +++ + Q DD + T+FVG+L VTD L+
Sbjct: 125 QTYNGT-----AMPNGAQNFRLNWASAGEKRQ-----DDSPDYTIFVGDLAGDVTDYVLQ 174
Query: 294 E 294
E
Sbjct: 175 E 175
>gi|449471209|ref|XP_004153241.1| PREDICTED: polyadenylate-binding protein RBP45-like, partial
[Cucumis sativus]
Length = 156
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/130 (80%), Positives = 117/130 (90%), Gaps = 2/130 (1%)
Query: 260 SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFA 319
SYQN Q AQ+++DPNNTT+FVGNLD+ VTDEHLR++F QYG+LVHVKIP GKRCGFVQFA
Sbjct: 1 SYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFA 60
Query: 320 DRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWN-AGYYGYAQGYENYGYA 378
DR+CAEEALR+LNGTQ+GGQNIRLSWGRSPSNKQ Q DPNQWN GYYGY QGYENY Y
Sbjct: 61 DRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGYYGYGQGYENYSY- 119
Query: 379 AAAPQDPSMY 388
A APQDP+M+
Sbjct: 120 APAPQDPNMF 129
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G+L + + +L F GE+V VK+ K+ GF++F R AE L+
Sbjct: 18 TIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRC------GFVQFADRNCAEEALRV 71
Query: 143 FNGTPMPNGEQNFRLNWA 160
NGT + G QN RL+W
Sbjct: 72 LNGTQI--GGQNIRLSWG 87
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 166 EKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGD 225
+ +D + TIFVG+L A+VTD L++ F +Y K+ + K GFV+F D
Sbjct: 9 QNENDPNNTTIFVGNLDANVTDEHLRQVF-GQYGELVHVKIPV------GKRCGFVQFAD 61
Query: 226 ESEQLRAMTEMNGVFCSTRPMRI 248
+ A+ +NG + +R+
Sbjct: 62 RNCAEEALRVLNGTQIGGQNIRL 84
>gi|384495849|gb|EIE86340.1| hypothetical protein RO3G_11051 [Rhizopus delemar RA 99-880]
Length = 1099
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/275 (38%), Positives = 159/275 (57%), Gaps = 18/275 (6%)
Query: 86 IGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNG 145
+G+L WMDE YL + + G V+ ++ +K Y FI+F++R A + L TFNG
Sbjct: 1 MGELDSWMDENYLRQLWWNLGHEVSCRISVDKYGA---NYAFIDFLTREAASKSLITFNG 57
Query: 146 TPMPNGEQNFRLNWASFGAG---------EKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
T +PN + F+LNW++ + + D+ IFVGDL ADV D +L TF++
Sbjct: 58 TQIPNTNKVFKLNWSNRDSNGMPLLQRPTLMSNFLGDYCIFVGDLRADVDDNILLTTFQS 117
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
RY S AKV++D TG +KG+GFV+F DE EQ R++ EM G + + +R+ A K
Sbjct: 118 RYKSAASAKVMVDPATGFSKGFGFVKFFDEIEQKRSLEEMQGAYVGSSRIRVSVARPK-- 175
Query: 257 VSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFV 316
A + V ++ TTVFVG L++ +T+E LR F +G +V VKI K F+
Sbjct: 176 --AKIETGPVVSGPEEI--TTVFVGGLNNTITEEELRAYFGTFGNIVAVKIIPLKNIAFI 231
Query: 317 QFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 351
Q+ +S AE+A+ LNG+ LGG +RLS+GR+ N
Sbjct: 232 QYEKKSSAEQAISELNGSHLGGAKLRLSFGRTQLN 266
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 12/104 (11%)
Query: 60 AAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQT 119
+ A A + P G P EI T+++G L + E L F G +VAVK+I
Sbjct: 170 SVARPKAKIETGPVVSG-PEEITTVFVGGLNNTITEEELRAYFGTFGNIVAVKII----- 223
Query: 120 GQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG 163
++ FI++ ++ AE+ + NG+ + G RL SFG
Sbjct: 224 -PLKNIAFIQYEKKSSAEQAISELNGSHL--GGAKLRL---SFG 261
>gi|449471357|ref|XP_004153285.1| PREDICTED: polyadenylate-binding protein RBP47B-like, partial
[Cucumis sativus]
Length = 218
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/128 (69%), Positives = 103/128 (80%), Gaps = 1/128 (0%)
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
P++QG E++TLWIGDLQ WMDETYLN CFAHTGEV +VKVI NKQTGQ EGYGF+EF
Sbjct: 90 PRRQGSTDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFF 149
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYML 190
S AE+VLQ +NGT MPN E FRLNWA+F A ++R DT D +IFVGDLAADVTD +L
Sbjct: 150 SHTTAEKVLQNYNGTIMPNTELPFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAIL 209
Query: 191 QETFRARY 198
QETF +RY
Sbjct: 210 QETFSSRY 217
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 13/125 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GDL + + L F A KV+ ++ TG+++GYGFV F + + +
Sbjct: 101 TLWIGDLQPWMDETYLNNCF-AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQ 159
Query: 235 EMNGVFC--STRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 292
NG + P R+ N T SA+ + D ++ ++FVG+L + VTD L
Sbjct: 160 NYNGTIMPNTELPFRL----NWATFSAN------DRRPDTGSDLSIFVGDLAADVTDAIL 209
Query: 293 RELFS 297
+E FS
Sbjct: 210 QETFS 214
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 277 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRM 330
T+++G+L + + +L F+ G++ VK+ K+ GFV+F + AE+ L+
Sbjct: 101 TLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQN 160
Query: 331 LNGTQLGGQNI--RLSWGRSPSNKQAQPD 357
NGT + + RL+W +N + +PD
Sbjct: 161 YNGTIMPNTELPFRLNWATFSANDR-RPD 188
>gi|406602666|emb|CCH45778.1| Nucleolysin TIA-1 isoform [Wickerhamomyces ciferrii]
Length = 485
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/336 (36%), Positives = 167/336 (49%), Gaps = 69/336 (20%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTG-EVVAVKVIRNK--QTGQIEGYGFIEFISRAGAERVL 140
LW+G+L + DE + + + G + VK+I+ K Q GY FIEF + A L
Sbjct: 43 LWMGELDPFWDENSIKSIWLSLGFNNINVKLIKEKIQQGFNNAGYCFIEFPNIEQASNAL 102
Query: 141 QTFNGTPMPNGEQNFRLNWASFG---------------AGEKRDDTPDHTIFVGDLAADV 185
+ NG +PN ++ +LNWAS G G R++ +IFVGDLA DV
Sbjct: 103 NS-NGLKIPNTNKSLKLNWASGGQNSNNHNNNNNNNGSIGYNRNEV---SIFVGDLAPDV 158
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
+D +L E F ++YPS G K++ID LTG +KGYGFVRF +E EQ RA+ EM G + RP
Sbjct: 159 SDTILYEYFGSKYPSVSGTKIMIDSLTGGSKGYGFVRFINELEQKRALVEMQGAILNGRP 218
Query: 246 MRIGPATNKK------------------TVSASYQNSQ---------------------- 265
+R+ A K + + N+
Sbjct: 219 IRVSTAVPKNRQQQQGQQQGGGFNGNQGFNGSRFNNNLQPLQSSIPSSSGPSQQILNGLE 278
Query: 266 ------VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFA 319
+ Q D N T VF+G L SIVT++ LR F +G + +VKIP GK CGFVQ+
Sbjct: 279 SQYQPPLTQFTDPNNTT-VFIGGLSSIVTEDELRLYFQPFGDITYVKIPVGKGCGFVQYV 337
Query: 320 DRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
RS AE A+ + G +G IRLSWGRS SN + Q
Sbjct: 338 TRSSAELAISKMQGYPIGNSRIRLSWGRSNSNPKPQ 373
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
PP Q T++IG L + E L F G++ VK+ K G GF+++
Sbjct: 283 PPLTQFTDPNNTTVFIGGLSSIVTEDELRLYFQPFGDITYVKIPVGK------GCGFVQY 336
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160
++R+ AE + G P+ G RL+W
Sbjct: 337 VTRSSAELAISKMQGYPI--GNSRIRLSWG 364
>gi|210075649|ref|XP_502423.2| YALI0D04917p [Yarrowia lipolytica]
gi|199425763|emb|CAG80611.2| YALI0D04917p [Yarrowia lipolytica CLIB122]
Length = 430
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/314 (36%), Positives = 164/314 (52%), Gaps = 56/314 (17%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHT---GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
+ T+++GDL+ WMDE + +A + VK+IR+K T I YGFI+F S A
Sbjct: 1 MSTIYMGDLEPWMDEAAIKNMWAQVMGPDTNINVKLIRDKFTDSIN-YGFIDFASPELAA 59
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTP--DHTIFVGDLAADVTDYMLQETFR 195
L+ FNG P+P ++ F+L GE D + +IFVGDLA + T+ L + F+
Sbjct: 60 AALK-FNGKPIPGTDRLFKL-------GEDNGDGAPVEFSIFVGDLAPESTEPELLQAFK 111
Query: 196 ARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255
+RY S + AK++ D +TG ++GYGFVRF E +Q +A+ EM G +RP+R+ AT K
Sbjct: 112 SRYESCRAAKIMTDPVTGLSRGYGFVRFSSEEDQQKALQEMQGYMLGSRPLRVSTATPKN 171
Query: 256 ---------------TVSASYQ----------------NSQVAQ-----------SDDDP 273
A YQ + QV Q D
Sbjct: 172 RHHHQPYMQFQPQQFQPPAHYQQLHSQHPFPHHPNGAPSHQVHQPFYGGPAHPLNQFTDA 231
Query: 274 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG 333
NNTTVFVG L S V+++ LR+ F +G + +VKIP GK CGFVQ+ R AE A+ + G
Sbjct: 232 NNTTVFVGGLSSSVSEDELRQYFQGFGDITYVKIPPGKGCGFVQYVQRQSAEMAITQMQG 291
Query: 334 TQLGGQNIRLSWGR 347
+G +RLSWGR
Sbjct: 292 YPIGNGRVRLSWGR 305
>gi|375152130|gb|AFA36523.1| nucleic acid binding protein, partial [Lolium perenne]
Length = 164
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 122/158 (77%), Gaps = 2/158 (1%)
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S KGAKV+ID TGR++GYGFVRF D++++ AMTEMNG++CSTRP+RIGPAT ++T +
Sbjct: 2 SVKGAKVIIDANTGRSRGYGFVRFADDNDKSHAMTEMNGIYCSTRPIRIGPATPRRTGDS 61
Query: 260 SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFA 319
+S SD D N TV+VG LD V+++ LR+ F++YG + VKIP GK+CGFVQ+
Sbjct: 62 G--SSTPGHSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQYV 119
Query: 320 DRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD 357
+R+ A+EAL+ LNG+ +G Q +RLSWGRSPS+KQ++ D
Sbjct: 120 NRTDAKEALQGLNGSVIGKQVVRLSWGRSPSHKQSRGD 157
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 66 AGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGY 125
+G + P G RT+++G L + E L FA G+V +VK+ KQ
Sbjct: 61 SGSSTPGHSDGDSTN-RTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQC------ 113
Query: 126 GFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160
GF+++++R A+ LQ NG+ + G+Q RL+W
Sbjct: 114 GFVQYVNRTDAKEALQGLNGSVI--GKQVVRLSWG 146
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 14/149 (9%)
Query: 107 EVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGT-----PMPNGEQNFRLNWAS 161
V KVI + TG+ GYGF+ F + NG P+ G R S
Sbjct: 2 SVKGAKVIIDANTGRSRGYGFVRFADDNDKSHAMTEMNGIYCSTRPIRIGPATPRRTGDS 61
Query: 162 FGA--GEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYG 219
+ G D+ + T++VG L +V++ L++ F A+Y K+ + K G
Sbjct: 62 GSSTPGHSDGDSTNRTVYVGGLDPNVSEDELRKAF-AKYGDVASVKIPL------GKQCG 114
Query: 220 FVRFGDESEQLRAMTEMNGVFCSTRPMRI 248
FV++ + ++ A+ +NG + +R+
Sbjct: 115 FVQYVNRTDAKEALQGLNGSVIGKQVVRL 143
>gi|366996152|ref|XP_003677839.1| hypothetical protein NCAS_0H01810 [Naumovozyma castellii CBS 4309]
gi|342303709|emb|CCC71491.1| hypothetical protein NCAS_0H01810 [Naumovozyma castellii CBS 4309]
Length = 443
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/311 (36%), Positives = 160/311 (51%), Gaps = 50/311 (16%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
L++GDL DE + + GE V VK++ N G +GY F+EF S L
Sbjct: 49 LYMGDLDPNWDENVIRQIWRDLGESNVHVKMMWNSNLGVNQGYCFVEFPSMEHGNNALLK 108
Query: 143 FNGTPMPNG-EQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG +P ++ +LNWAS GA + ++FVGDL+ +VT+ L E F RYPST
Sbjct: 109 -NGIVIPGFPQRRLKLNWASAGA---NGNNSGFSVFVGDLSPNVTEAQLFELFIGRYPST 164
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG------------ 249
AKVV D+LTG +K YGFV+F ++Q R + EM GVF + R +++G
Sbjct: 165 CHAKVVHDQLTGVSKCYGFVKFNSATDQQRVLVEMQGVFLNGRSIKVGLTGGAHNDNSNT 224
Query: 250 -------------PATNKKTVSASYQNSQ-------------------VAQSDDDPNNTT 277
P + TVS+ N++ DPNNTT
Sbjct: 225 NSMAGGRSRFGGMPPNSASTVSSGNSNNRNMTPLLNSSQFMYPVQQQPTLNHLTDPNNTT 284
Query: 278 VFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLG 337
VF+G L S+V+++ LR+ F +G +++VKIP GK CGFVQ+ DR AE A+ + G L
Sbjct: 285 VFIGGLSSLVSEDDLRQYFQPFGDIIYVKIPTGKGCGFVQYVDRLSAELAISKMQGFPLA 344
Query: 338 GQNIRLSWGRS 348
IRLSWGRS
Sbjct: 345 NSRIRLSWGRS 355
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 19/188 (10%)
Query: 163 GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVR 222
G G +T +++GDL + + ++++ +R S K++ + G +GY FV
Sbjct: 36 GGGATDYNTGSSQLYMGDLDPNWDENVIRQIWRDLGESNVHVKMMWNSNLGVNQGYCFVE 95
Query: 223 FGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGN 282
F A+ + NG+ P R N + A+ NS +VFVG+
Sbjct: 96 FPSMEHGNNALLK-NGIVIPGFPQRR-LKLNWASAGANGNNSGF----------SVFVGD 143
Query: 283 LDSIVTDEHLRELF------SQYGQLVHVKIPAGKRC-GFVQFADRSCAEEALRMLNGTQ 335
L VT+ L ELF + + ++VH ++ +C GFV+F + + L + G
Sbjct: 144 LSPNVTEAQLFELFIGRYPSTCHAKVVHDQLTGVSKCYGFVKFNSATDQQRVLVEMQGVF 203
Query: 336 LGGQNIRL 343
L G++I++
Sbjct: 204 LNGRSIKV 211
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T++IG L + E L F G+++ VK+ K G GF++++ R AE +
Sbjct: 284 TVFIGGLSSLVSEDDLRQYFQPFGDIIYVKIPTGK------GCGFVQYVDRLSAELAISK 337
Query: 143 FNGTPMPNGEQNFRLNWA 160
G P+ N RL+W
Sbjct: 338 MQGFPLANSR--IRLSWG 353
>gi|409079460|gb|EKM79821.1| hypothetical protein AGABI1DRAFT_57019, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 366
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/302 (38%), Positives = 161/302 (53%), Gaps = 46/302 (15%)
Query: 93 MDETYLN-TCFAHTGEVVAVKVIR---NKQTGQIE---GYGFIEFISRAGAERVLQTFNG 145
MDE Y C E + +KV + + TGQ GY F+ F + A A V N
Sbjct: 1 MDEEYAKQVCKLLNWEPIQIKVPQPPPDPATGQQANNPGYCFLTFSTPAQASTVFAQVNN 60
Query: 146 T------PMPNGEQNFRLNWA-SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA-- 196
+ MPN + F L+WA + + +++IFVGDLA + ++ L FR
Sbjct: 61 SGKGGTMTMPNSSKPFVLSWAPAITPNNSQQYQKEYSIFVGDLAPETSNSDLVAVFRNPV 120
Query: 197 ------RYP-------STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST 243
R P S K AK+++D LTG ++GYGFVRF DE++Q RA+ EM+G++C +
Sbjct: 121 LGLRNDREPKFIRPFLSCKSAKIMLDPLTGVSRGYGFVRFSDEADQQRALIEMHGLYCLS 180
Query: 244 RPMRIGPATNK----KTVSASYQ-------------NSQVAQSDDDPNNTTVFVGNLDSI 286
RPMRI PAT K VS Y N V + +DP NTTVFVG L +
Sbjct: 181 RPMRISPATAKFKPASGVSLDYSQAPPFSAPLPNVDNQPVTLTSNDPYNTTVFVGGLSPL 240
Query: 287 VTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 346
+++E LR F+ +G + +VK+P GK CGFVQF ++ AE A+ + G +GG IRLSWG
Sbjct: 241 ISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKMQGFPIGGSRIRLSWG 300
Query: 347 RS 348
RS
Sbjct: 301 RS 302
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA G++ VKV K GF++F+ +A AER ++
Sbjct: 231 TVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHC------GFVQFVRKADAERAIEK 284
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 285 MQGFPI--GGSRIRLSW 299
>gi|302841234|ref|XP_002952162.1| hypothetical protein VOLCADRAFT_32547 [Volvox carteri f.
nagariensis]
gi|300262427|gb|EFJ46633.1| hypothetical protein VOLCADRAFT_32547 [Volvox carteri f.
nagariensis]
Length = 193
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 125/191 (65%), Gaps = 15/191 (7%)
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
D ++FVGDL +V D+ L+ FR +PS + AKV+ D +TGR+KGYGFVRFG E+E+ RA
Sbjct: 3 DFSLFVGDLPPEVHDHFLESFFRQYFPSVRSAKVMTDPVTGRSKGYGFVRFGSEAERDRA 62
Query: 233 MTEMNGVFCSTRPMRIGPATNKKT---------------VSASYQNSQVAQSDDDPNNTT 277
+ EMNGVF S+RP+R+ AT ++ A + DPNNTT
Sbjct: 63 VVEMNGVFISSRPVRVSVATARRIDGGPLVPGGGSRVPGSGPGGGGGGGALGEADPNNTT 122
Query: 278 VFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLG 337
+F+G L S VT++ LR +F +YG++++ KIP GK CGFVQF DR AE A++ +NG +G
Sbjct: 123 LFIGGLSSGVTEDQLRGVFGRYGEIIYTKIPPGKGCGFVQFIDRQAAEYAMQEVNGQIIG 182
Query: 338 GQNIRLSWGRS 348
G ++R+SWG+S
Sbjct: 183 GSSVRISWGKS 193
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 83 TLWIGDLQYWMDETYLNTCFA-HTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+L++GDL + + +L + F + V + KV+ + TG+ +GYGF+ F S A +R +
Sbjct: 5 SLFVGDLPPEVHDHFLESFFRQYFPSVRSAKVMTDPVTGRSKGYGFVRFGSEAERDRAVV 64
Query: 142 TFNGTPMPNGEQNFRLNWASF----------GAGEK----------------RDDTPDHT 175
NG + + + R++ A+ G G + D + T
Sbjct: 65 EMNGVFISS--RPVRVSVATARRIDGGPLVPGGGSRVPGSGPGGGGGGGALGEADPNNTT 122
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+F+G L++ VT+ L+ F RY +++ ++ KG GFV+F D AM E
Sbjct: 123 LFIGGLSSGVTEDQLRGVF-GRY-----GEIIYTKIP-PGKGCGFVQFIDRQAAEYAMQE 175
Query: 236 MNGVFCSTRPMRI 248
+NG +RI
Sbjct: 176 VNGQIIGGSSVRI 188
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TL+IG L + E L F GE++ K+ K G GF++FI R AE +Q
Sbjct: 122 TLFIGGLSSGVTEDQLRGVFGRYGEIIYTKIPPGK------GCGFVQFIDRQAAEYAMQE 175
Query: 143 FNGTPMPNGEQNFRLNWA 160
NG + G + R++W
Sbjct: 176 VNGQII--GGSSVRISWG 191
>gi|254566455|ref|XP_002490338.1| RNA binding protein that negatively regulates growth rate
[Komagataella pastoris GS115]
gi|238030134|emb|CAY68057.1| RNA binding protein that negatively regulates growth rate
[Komagataella pastoris GS115]
gi|328350732|emb|CCA37132.1| Uncharacterized RNA-binding protein C23E6.01c [Komagataella
pastoris CBS 7435]
Length = 506
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/338 (34%), Positives = 169/338 (50%), Gaps = 49/338 (14%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQT-----------GQIEGYGFIEF 130
RTLW+GDL+ W E + + G+ V VK+IR++ Q GY F+EF
Sbjct: 52 RTLWMGDLEPWWVEENIIQLWQQLGQSVRVKLIRSRHNRSPNPNSSLPPPQNAGYCFVEF 111
Query: 131 ISRAGAERVLQTFNGTPMPNGE-QNFRLNWASFGAGEKRDD-TPDHTIFVGDLAADVTDY 188
A + L NG+ +P + FRLNWAS + + TP +++FVGDL+ T+
Sbjct: 112 ERHEDALQAL-ALNGSIVPRSSGRLFRLNWASGPTLQSQIPPTPQYSLFVGDLSPSTTEA 170
Query: 189 MLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248
L F+ Y S + +V+ D TG ++ +GFVRF +E ++ RA+ EM+G++ RP+R+
Sbjct: 171 HLLALFQPNYSSIQSVRVMTDPATGSSRCFGFVRFTEEEDRQRALHEMSGIWLGGRPIRV 230
Query: 249 GPATNKKTVSASYQ--------------------NSQVAQSDDDPNNTTVFVGNLDSIVT 288
AT + Q NS +DP N+TVFVG L + V+
Sbjct: 231 ALATPRGAGHQPVQMQQHLQYAPSAPMVPQFASNNSSSRNIYNDPTNSTVFVGGLAAGVS 290
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
+E L LF +G + +KIP GK CGFV+F+ R AE A+ ++G +GG +RLSWGRS
Sbjct: 291 EETLFTLFEPFGSISSIKIPRGKGCGFVKFSTREEAENAISGMHGFLIGGSRVRLSWGRS 350
Query: 349 ------------PSNKQAQP---DPNQWNAGYYGYAQG 371
P + P DP N G YG G
Sbjct: 351 SLPNQHTHSHPHPQHLMMSPGVFDPMGRNGGMYGIPPG 388
>gi|403214377|emb|CCK68878.1| hypothetical protein KNAG_0B04440 [Kazachstania naganishii CBS
8797]
Length = 397
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 117/319 (36%), Positives = 165/319 (51%), Gaps = 48/319 (15%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGE-VVAVKVI-------RNKQTGQIEGYGFIEFISRAG 135
L++GDL+ DE + ++ GE ++VK++ N+ + +GY FI+F +
Sbjct: 56 LYMGDLEPSWDENVIKRIWSSIGEDNISVKMMWQNNNYMGNESGPRNQGYCFIDFPTHFN 115
Query: 136 AERVLQTFNGTPMPNG-EQNFRLNWASFGA----GEKRDDTPDHTIFVGDLAADVTDYML 190
A L N +P + +LNWAS A G + +IFVGDLA +VT+ L
Sbjct: 116 ASNALLK-NKMSIPGHPHKKLKLNWASSSAPSTAGVSTTGGNNFSIFVGDLAPNVTEAQL 174
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG- 249
+ F +RYPST+ AKVVID TG +KGYGF+RF D ++Q A+ EM GVF + R +++G
Sbjct: 175 FDLFISRYPSTEHAKVVIDLSTGVSKGYGFIRFRDPADQQTALAEMQGVFLNGRALKVGM 234
Query: 250 ------------------------PATNKKTVSASYQNSQ---------VAQSDDDPNNT 276
PA K S SQ DPNNT
Sbjct: 235 SSGQSNSGAGGSRQVGHDRYGGSKPAGGKSNTPNSALFSQFMYPIQQQPALNHFTDPNNT 294
Query: 277 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQL 336
TVF+G L +V +E LR+ F +G++V+VKIP GK CGFVQ+ DR AE A+ + G +
Sbjct: 295 TVFIGGLSPLVKEEELRQYFQPFGEIVYVKIPVGKGCGFVQYIDRISAETAISQMQGFPI 354
Query: 337 GGQNIRLSWGRSPSNKQAQ 355
+RLSWGRS +Q Q
Sbjct: 355 SNSRVRLSWGRSAKQQQLQ 373
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T++IG L + E L F GE+V VK+ K G GF+++I R AE +
Sbjct: 295 TVFIGGLSPLVKEEELRQYFQPFGEIVYVKIPVGK------GCGFVQYIDRISAETAISQ 348
Query: 143 FNGTPMPNGEQNFRLNWA 160
G P+ N RL+W
Sbjct: 349 MQGFPISNSR--VRLSWG 364
>gi|294463675|gb|ADE77364.1| unknown [Picea sitchensis]
Length = 253
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/198 (53%), Positives = 126/198 (63%), Gaps = 27/198 (13%)
Query: 233 MTEMNGVFCSTRPMRIGPATNKKTV--------SASYQN-------SQVAQSDDDPNNTT 277
MTEMN V+CSTRPMRI AT KK+ +YQ +QV QSDD NNTT
Sbjct: 1 MTEMNNVYCSTRPMRISAATPKKSAGFQQQYTPKVAYQTPAYSAPPAQVFQSDDQ-NNTT 59
Query: 278 VFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLG 337
+FVG LD V+DE LR++F Q+G+LV+VKIP K CGFVQF +R+CAEEAL+ ++GT +G
Sbjct: 60 IFVGGLDPTVSDEDLRQIFGQFGELVYVKIPVNKGCGFVQFGNRACAEEALQRVHGTVIG 119
Query: 338 GQNIRLSWGRSPSNKQAQP--------DPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY- 388
Q +RLSWGRSP+ KQ QP D NQWN Y G Y AAPQDPS Y
Sbjct: 120 QQTVRLSWGRSPATKQDQPAGWGQAQADANQWNGA--YYGYGQGYDAYGYAAPQDPSTYG 177
Query: 389 YGGYPGYGNYQQPQQPQQ 406
YG YP GNYQQ + Q+
Sbjct: 178 YGAYPSSGNYQQQTEVQE 195
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + + L F GE+V VK+ NK G GF++F +RA AE LQ
Sbjct: 59 TIFVGGLDPTVSDEDLRQIFGQFGELVYVKIPVNK------GCGFVQFGNRACAEEALQR 112
Query: 143 FNGTPMPNGEQNFRLNW 159
+GT + G+Q RL+W
Sbjct: 113 VHGTVI--GQQTVRLSW 127
>gi|367014399|ref|XP_003681699.1| hypothetical protein TDEL_0E02450 [Torulaspora delbrueckii]
gi|359749360|emb|CCE92488.1| hypothetical protein TDEL_0E02450 [Torulaspora delbrueckii]
Length = 472
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 166/303 (54%), Gaps = 41/303 (13%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIE---GYGFIEFISRAGAERV 139
L++GDL DE + + + GE V +K++ N + + GY F++F SR+ A
Sbjct: 50 LYMGDLDPSWDENVIRSIWNSLGESNVEIKLMWNNRNAGVRTHLGYCFVQFSSRSQASNA 109
Query: 140 LQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARY 198
L NG +P + RLNW+S +G D + + ++FVGDLA +VT+ L E F ++
Sbjct: 110 LLK-NGMAIPGYPSKTLRLNWSS-ASGNSADGSNEISVFVGDLAPNVTESDLFELFISKC 167
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK--- 255
PST AKV+ D++TG +KGY FVRFG++ +Q RA+ EM G F R +R+G A ++
Sbjct: 168 PSTSNAKVMYDQVTGVSKGYAFVRFGNQEDQQRALQEMTGTFLKGRAIRVGSAGHQNQRN 227
Query: 256 ---------------TVS----ASYQNSQVAQ------------SDDDPNNTTVFVGNLD 284
TVS A+ ++ +Q S D NNTT+FV +L
Sbjct: 228 RNGPGLENKLKGLNATVSSPKPANISSTNFSQFILPTQQLPPLNSFTDRNNTTLFVSSLS 287
Query: 285 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 344
+VT+ L+ F +G +++ K+P K+CGFVQ+ DR+ AE A+ L G + G I++S
Sbjct: 288 HMVTENELKAFFQPFGNVIYAKLPENKQCGFVQYVDRASAEMAILKLQGFPIRGSRIKIS 347
Query: 345 WGR 347
WGR
Sbjct: 348 WGR 350
>gi|384245275|gb|EIE18770.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 351
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 163/290 (56%), Gaps = 10/290 (3%)
Query: 68 VAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGF 127
V+ P + G + L++G+L ++ + L F+ G+V +K+I++K TG GYGF
Sbjct: 8 VSQNPARLGSGDAAKALYVGNLHPFVTDAMLQEIFSTLGQVGEIKIIKDKLTGLSAGYGF 67
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTD 187
++F+ A+ LQ+ NG + Q R+NWA F ++ D IFVGDLA+D+ D
Sbjct: 68 VQFLDHRAADMALQSLNGRVLHG--QELRVNWA-FQKDQREDSASQFQIFVGDLASDIND 124
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
+L E F++ A+V+ D TGR+KGYGFV F ++ +A+++M+G +R +R
Sbjct: 125 KLLCEAFQS--CGCADARVMWDHNTGRSKGYGFVSFKTRADAEQALSQMSGTMLGSRRIR 182
Query: 248 IGPATNKK-----TVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 302
G A +K+ + +A + S ++++ DP N V+VGNL V+D L+ SQ+G +
Sbjct: 183 CGWAQHKQENSQASFAAVDRVSTLSRAQADPENANVYVGNLAPDVSDAELQTAVSQFGAV 242
Query: 303 VHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
+ VKI F QFA + A A+ L+G LGG+ ++ SWGR + K
Sbjct: 243 LDVKIYRKGGYAFAQFASHADAVRAIVGLSGQNLGGKALKCSWGRHQARK 292
>gi|410079368|ref|XP_003957265.1| hypothetical protein KAFR_0D04830 [Kazachstania africana CBS 2517]
gi|372463850|emb|CCF58130.1| hypothetical protein KAFR_0D04830 [Kazachstania africana CBS 2517]
Length = 406
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 111/297 (37%), Positives = 154/297 (51%), Gaps = 44/297 (14%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++GDL DE ++ +A GE V+VK++ Y FI F+ A L
Sbjct: 33 VLYMGDLDLSWDERVVSQIWASLGEPNVSVKMMNR--------YCFITFLDSLTASNALL 84
Query: 142 TFNGTPMPN-GEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG +P G + +LNWA + + ++IFVGDL+ +VT+ L + F +Y S
Sbjct: 85 K-NGMLIPGYGGKRLKLNWAQ----ASSNASNGYSIFVGDLSPNVTEAQLFDLFINKYAS 139
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
T AK+V D+ TG ++GYGFVRF +Q A+ EM G+F + R ++IG NK+
Sbjct: 140 TDHAKIVYDQATGVSRGYGFVRFNSLMDQQHALLEMQGIFLNGRAIKIGMTGNKQGQLQG 199
Query: 261 YQNSQVAQSD-----------------------------DDPNNTTVFVGNLDSIVTDEH 291
Q+ Q D DPNNTTVFVG L S+VT++
Sbjct: 200 QQHQGQQQQDFKVPIQSNTPMNQSQFMYPVQQQPTLNHFTDPNNTTVFVGGLSSLVTEDE 259
Query: 292 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
LRE F +G +V+VKIP GK CGFVQ+ DR AE A+ + G + IRLSWGRS
Sbjct: 260 LREYFKPFGTIVYVKIPVGKGCGFVQYIDRVSAENAISKMQGFPIANSRIRLSWGRS 316
>gi|190346145|gb|EDK38159.2| hypothetical protein PGUG_02257 [Meyerozyma guilliermondii ATCC
6260]
Length = 681
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/356 (34%), Positives = 174/356 (48%), Gaps = 86/356 (24%)
Query: 82 RTLWIGDLQYWMDETYL-NTCFAHTGEVVAVKVIRNKQT--------GQIEGYGFIEFIS 132
RTLW+GDL W+DE + + + G+ V +K+I+ K GY F+EF S
Sbjct: 53 RTLWMGDLDPWLDEAAIADLWYQLLGKKVTIKIIKPKNVRGSMSSSGLSHSGYCFVEFES 112
Query: 133 RAGAERVLQTFNGTPMP---------------NGEQNFRLNWASFGAGEKRDDT--PDHT 175
A++ L + NG +P N ++ FRLNWAS GA P+++
Sbjct: 113 YEDAQQAL-SLNGQLLPDIAMPSQQSFPNNPDNQKKYFRLNWAS-GATLTAPIVQGPEYS 170
Query: 176 IFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+FVGDL+A T+ L F+ +P S K +V+ D +TG+++ +GFVRF DESE+ RA+
Sbjct: 171 LFVGDLSASTTEAHLLAFFQKSFPNSIKTVRVMTDPVTGKSRCFGFVRFTDESERQRALV 230
Query: 235 EMNGVFCSTRPMRIGPATNKKT----------------------------VSASYQNSQV 266
EMNG + RP+R+ AT + + S Y N
Sbjct: 231 EMNGAWFGGRPLRVALATPRSSGKRFGFQNMYPFWGGGAPYYPYGYAGAPGSPDYGNMGG 290
Query: 267 AQSDDD----------------------------PNNTTVFVGNLDSIVTDEHLRELFSQ 298
+DD PNNTTVFVG L S V ++ L LF Q
Sbjct: 291 LNEEDDYGGAPPPPPPPPPPGQIPYPPPVQQYTDPNNTTVFVGGLSSDVNEQTLFTLFKQ 350
Query: 299 YGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQ 353
+G + +KIP GK CGFV++ +R AEEA+ + G +GG +RLSWGR S SNK+
Sbjct: 351 FGIIQQIKIPPGKNCGFVKYTNREDAEEAIASMQGFIIGGNRVRLSWGRVSASNKK 406
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 19/129 (14%)
Query: 277 TVFVGNLDSIVTDEHLRELFSQY--GQLVHVKI----PAGK-RC-GFVQFADRSCAEEAL 328
++FVG+L + T+ HL F + + V++ GK RC GFV+F D S + AL
Sbjct: 170 SLFVGDLSASTTEAHLLAFFQKSFPNSIKTVRVMTDPVTGKSRCFGFVRFTDESERQRAL 229
Query: 329 RMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY 388
+NG GG+ +R++ S+ + N + ++G Y YGYA A
Sbjct: 230 VEMNGAWFGGRPLRVALATPRSSGKRFGFQNMYP--FWGGGAPYYPYGYAGAP------- 280
Query: 389 YGGYPGYGN 397
G P YGN
Sbjct: 281 --GSPDYGN 287
>gi|323450795|gb|EGB06674.1| hypothetical protein AURANDRAFT_28594, partial [Aureococcus
anophagefferens]
Length = 319
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 154/303 (50%), Gaps = 32/303 (10%)
Query: 76 GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAG 135
G ++++LW+G++Q E Y+ + +A + VK++R++ TG GYGF+EF S A
Sbjct: 17 GTLDDVKSLWVGEVQPDWTEEYMRSIYAECNKRFNVKIMRDRATGTAAGYGFLEFESHAD 76
Query: 136 AERVLQTFNGTPMPNGEQNFRLNWAS---FGAGEKRDDTP------------------DH 174
A VL+ + P+P L W A + + TP D
Sbjct: 77 AAEVLRLYEDKPIPGTPFKCVLRWGGGHGTAAAKPKGGTPYGAGTMHPVGYSGPPPQADW 136
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+IFVGDL VT+ L F +Y S K+VID TG +KG+GF++FG E+E+ AM
Sbjct: 137 SIFVGDLDYTVTEQQLHGAFAKKYRSILSTKLVIDMSTGLSKGFGFIKFGSEAERDSAMN 196
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQ-----------SDDDPNNTTVFVGNL 283
EM+G + R +R AT ++ + +Q Q + ++ NT VFVG L
Sbjct: 197 EMHGQYVGERAIRCTLATTREEREREAKMNQQQQMYDPSRLHAPKATEEGENTCVFVGGL 256
Query: 284 DSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRL 343
D V+ + LR F G + +++IP G+ CGFV F R AE A+ L G ++ G +RL
Sbjct: 257 DESVSPDMLRHHFGLLGDIAYIRIPPGRGCGFVGFVHRKNAEAAISTLQGLRINGYKVRL 316
Query: 344 SWG 346
SWG
Sbjct: 317 SWG 319
>gi|254577373|ref|XP_002494673.1| ZYRO0A07018p [Zygosaccharomyces rouxii]
gi|238937562|emb|CAR25740.1| ZYRO0A07018p [Zygosaccharomyces rouxii]
Length = 558
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/334 (36%), Positives = 162/334 (48%), Gaps = 52/334 (15%)
Query: 67 GVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE--VVAVKVIRNKQTGQIE- 123
G P G G L++GDL DE + + GE VV ++ N +G
Sbjct: 32 GTGSPVNAVGNRGS--QLYMGDLDPSWDENTIRQIWGSLGESNVVIRLMLHNNVSGSGTM 89
Query: 124 ------GYGFIEFISRAGAERVLQTFNGTPMPN-GEQNFRLNWASFGAGEKRDDTPDHTI 176
GY F+EF S A L NG +PN + +LNWAS + ++++
Sbjct: 90 GPRNNLGYCFLEFPSTVHASNALLK-NGMQIPNFVHKRLKLNWAS-SSHSSAGAFNEYSV 147
Query: 177 FVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM 236
FVGDLA +VT+ L E F +R+ ST K+V D+LTG +KGY FV+F + + Q RA+ EM
Sbjct: 148 FVGDLAPNVTESQLFELFISRFNSTSHVKIVYDQLTGVSKGYAFVKFTNPAHQQRALLEM 207
Query: 237 NGVFCSTRPMRIGPA---------------------------TNKKTVSASYQNSQ---- 265
G+F S R +R+ A N S SQ
Sbjct: 208 QGIFLSGRAIRVSNAGHLQNSADGKSKATGAASASNANAVGGINTGNNSGLMSGSQFMYP 267
Query: 266 -----VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFAD 320
S DPNNTTVFVG L S+V ++ LR F +G +V+VKIP GK CGFVQ+ D
Sbjct: 268 VQPQPALNSFTDPNNTTVFVGGLSSLVAEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVD 327
Query: 321 RSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 354
R AE A+ + G +G +RLSWGRS KQA
Sbjct: 328 RISAETAIAKMQGFPIGNSRVRLSWGRSA--KQA 359
>gi|50288915|ref|XP_446887.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526196|emb|CAG59820.1| unnamed protein product [Candida glabrata]
Length = 555
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/315 (36%), Positives = 158/315 (50%), Gaps = 51/315 (16%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTG---QIEGYGFIEFISRAGAERV 139
L++GDL DE + +A GE + V+++ + GY F+EF S A A
Sbjct: 86 LYMGDLDPSWDEAVVKGIWAALGEENIGVRMMWGGDADFHRKNLGYCFVEFPSPAHASNA 145
Query: 140 LQTFNGTPMPN-GEQNFRLNW----------ASFGAGEKRDDTPDHTIFVGDLAADVTDY 188
L NG +P + +LNW AS G + +++IFVGDLA VT+
Sbjct: 146 LMK-NGMEIPGFVHKKLKLNWSAQSVNNGSGASVANGAVANQQTNNSIFVGDLAPSVTEA 204
Query: 189 MLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248
L + F +YPST AKV+ D+LTG +KGYGFV+F +Q RA+ EM G F + R ++I
Sbjct: 205 QLFDLFINKYPSTVHAKVMYDQLTGISKGYGFVKFKSSMDQQRALVEMQGCFLNGRAIKI 264
Query: 249 GPA-----------------TNKKTVSASYQNSQ------------------VAQSDDDP 273
G A N + Q S+ V DP
Sbjct: 265 GIAGGNNNNNSNSNYNNQRMANDNISNGLGQQSRSLNGQLPQQFVNATPQQPVLNHFTDP 324
Query: 274 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG 333
NNTTVFVG L +VT++ LR F +G +++VKIPAGK CGFVQ+ +RS AE A+ + G
Sbjct: 325 NNTTVFVGGLSPLVTEDELRSYFEPFGTIIYVKIPAGKGCGFVQYVERSSAETAITKMQG 384
Query: 334 TQLGGQNIRLSWGRS 348
+ +RLSWGRS
Sbjct: 385 FPIANSRVRLSWGRS 399
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 17/187 (9%)
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVID---RLTGRTKGYGFVRFGDES 227
TP +++GDL + +++ + A G +++ + GY FV F +
Sbjct: 81 TPGSQLYMGDLDPSWDEAVVKGIWAALGEENIGVRMMWGGDADFHRKNLGYCFVEFPSPA 140
Query: 228 EQLRAMT----EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNL 283
A+ E+ G + + AS N VA + N ++FVG+L
Sbjct: 141 HASNALMKNGMEIPGFVHKKLKLNWSAQSVNNGSGASVANGAVA---NQQTNNSIFVGDL 197
Query: 284 DSIVTDEHLRELF-SQYGQLVHVKI------PAGKRCGFVQFADRSCAEEALRMLNGTQL 336
VT+ L +LF ++Y VH K+ K GFV+F + AL + G L
Sbjct: 198 APSVTEAQLFDLFINKYPSTVHAKVMYDQLTGISKGYGFVKFKSSMDQQRALVEMQGCFL 257
Query: 337 GGQNIRL 343
G+ I++
Sbjct: 258 NGRAIKI 264
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L + F G ++ VK+ K G GF++++ R+ AE +
Sbjct: 328 TVFVGGLSPLVTEDELRSYFEPFGTIIYVKIPAGK------GCGFVQYVERSSAETAITK 381
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ N RL+W
Sbjct: 382 MQGFPIANSR--VRLSW 396
>gi|302656875|ref|XP_003020176.1| hypothetical protein TRV_05751 [Trichophyton verrucosum HKI 0517]
gi|291183977|gb|EFE39558.1| hypothetical protein TRV_05751 [Trichophyton verrucosum HKI 0517]
Length = 281
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 123/225 (54%), Gaps = 39/225 (17%)
Query: 167 KRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDE 226
+ + P+ +IFVGDL +V +Y+L F++R+PS K AK++ D +TG ++GYGFVRF DE
Sbjct: 21 REERGPEFSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPITGLSRGYGFVRFSDE 80
Query: 227 SEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS-------------------------- 260
++Q RA++EM GV+C RPMRI AT K A
Sbjct: 81 TDQQRALSEMQGVYCGNRPMRISTATPKNKGPAGPGGPAHMGVPGGPPGGMYPPSMGGAG 140
Query: 261 -----------YQNS--QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 307
Y + Q DPNNTTVFVG L VT++ LR F +G++ +VKI
Sbjct: 141 GPPGPGGPQMGYYGAAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKI 200
Query: 308 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
P GK CGFVQF R AE A+ + G +G +RLSWGRS +N
Sbjct: 201 PPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNS 245
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L ++ E L + F GE+ VK+ K G GF++F+ R AE +
Sbjct: 170 TVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVQRHAAEMAINQ 223
Query: 143 FNGTPMPNGEQNFRLNWA 160
G P+ G RL+W
Sbjct: 224 MQGYPI--GNSRVRLSWG 239
>gi|151944033|gb|EDN62326.1| RNA-binding protein [Saccharomyces cerevisiae YJM789]
Length = 523
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 166/331 (50%), Gaps = 67/331 (20%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQ----------IEGYGFIEFIS 132
L++GDL D+ + +A GE + V+++ N +GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 133 RAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTP------DHTIFVGDLAADV 185
A L NG +PN + +LNWA+ + + +IFVGDLAA+V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAANV 174
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
T+ L E F RY ST AK+V D++TG +KGYGFV+F + EQ A++EM GVF + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 246 MRIGPAT------------NKKTVSASYQN----------SQVAQSDD------------ 271
+++GP + N+ + S + +N S ++ ++
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFKRNHMSQF 294
Query: 272 --------------DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 317
DPNNTTVF+G L S+VT++ LR F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQ 354
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
+ DR AE A+ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|426192598|gb|EKV42534.1| hypothetical protein AGABI2DRAFT_229063, partial [Agaricus bisporus
var. bisporus H97]
Length = 396
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 119/334 (35%), Positives = 164/334 (49%), Gaps = 80/334 (23%)
Query: 93 MDETYLN-TCFAHTGEVVAVKVIR---NKQTGQIE---GYGFIEFISRAGAERVLQTFNG 145
MDE Y C E + +KV + + TGQ GY F+ F + A A VL N
Sbjct: 1 MDEEYAKQVCKLLNWEPIQIKVPQPPPDPATGQQANNPGYCFLTFSTPAQASTVLAQVNN 60
Query: 146 T------PMPNGEQNFRLNWASFGAGEKRDDTP----DHTIFVGDLAADVTDYMLQETFR 195
+ MPN + F L+WA A TP +++IFVGDLA + ++ L FR
Sbjct: 61 SGKGGTMTMPNSSKPFVLSWAP--AVTPSISTPQYQKEYSIFVGDLAPETSNSDLVAVFR 118
Query: 196 A--------RYP-------STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
R P S K AK+++D LTG ++GYGFVRF DE++Q RA+ EM+G++
Sbjct: 119 NPVLGLRNDREPKFIRPFLSCKSAKIMLDPLTGVSRGYGFVRFSDEADQQRALIEMHGLY 178
Query: 241 CSTRPMRIGPAT----------NKKTVSASYQNSQVAQ---------------------- 268
C +RPMRI PAT N VS +Q+ Q
Sbjct: 179 CLSRPMRISPATAKFKPASGVGNGLGVSGLLSEAQLRQVFGQTDGYLMTEESLKHHAHAR 238
Query: 269 --------------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
+ +DP NTTVFVG L ++++E LR F+ +G + +VK+P GK CG
Sbjct: 239 AILGNLMGPNGEQLTSNDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCG 298
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
FVQF ++ AE A+ + G +GG IRLSWGRS
Sbjct: 299 FVQFVRKADAERAIEKMQGFPIGGSRIRLSWGRS 332
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA G++ VKV K G F++F+ +A AER ++
Sbjct: 261 TVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCG------FVQFVRKADAERAIEK 314
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 315 MQGFPI--GGSRIRLSW 329
>gi|323337302|gb|EGA78555.1| Nam8p [Saccharomyces cerevisiae Vin13]
Length = 523
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 165/331 (49%), Gaps = 67/331 (20%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQ----------IEGYGFIEFIS 132
L++GDL D+ + +A GE + V+++ N +GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 133 RAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTP------DHTIFVGDLAADV 185
A L NG +PN + +LNWA+ + + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
T+ L E F RY ST AK+V D++TG +KGYGFV+F + EQ A++EM GVF + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 246 MRIGPAT------------NKKTVSASYQN----------SQVAQSDD------------ 271
+++GP + N+ + S + +N S ++ ++
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNXMGFKRNHMSQF 294
Query: 272 --------------DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 317
DPNNTTVF+G L S+VT++ LR F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKXCGFVQ 354
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
+ DR AE A+ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|365765198|gb|EHN06710.1| Nam8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 523
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 165/331 (49%), Gaps = 67/331 (20%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQI----------EGYGFIEFIS 132
L++GDL D+ + +A GE + V+++ N +GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNXSRSSMGPKNNQGYCFVDFPS 115
Query: 133 RAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTP------DHTIFVGDLAADV 185
A L NG +PN + +LNWA+ + + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
T+ L E F RY ST AK+V D++TG +KGYGFV+F + EQ A++EM GVF + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 246 MRIGPAT------------NKKTVSASYQN----------SQVAQSDD------------ 271
+++GP + N+ + S + +N S ++ ++
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNTMGFKRNHMSQF 294
Query: 272 --------------DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 317
DPNNTTVF+G L S+VT++ LR F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQ 354
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
+ DR AE A+ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|256269427|gb|EEU04722.1| Nam8p [Saccharomyces cerevisiae JAY291]
Length = 523
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 162/331 (48%), Gaps = 67/331 (20%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQ----------IEGYGFIEFIS 132
L++GDL D+ + +A GE + V+++ N +GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 133 RAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTP------DHTIFVGDLAADV 185
A L NG +PN + +LNWA+ + + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
T+ L E F RY ST AK+V D++TG +KGYGFV+F + EQ A++EM GVF + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 246 MRIGPAT-------------------NKKTVSASY------------QNSQVAQSD---- 270
+++GP + N + V + + N ++D
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMDFKRNDMSQF 294
Query: 271 -------------DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 317
DPNNTTVF+G L S+VT++ LR F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQ 354
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
+ DR AE A+ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|349578638|dbj|GAA23803.1| K7_Nam8p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298893|gb|EIW09988.1| Nam8p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 523
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 161/331 (48%), Gaps = 67/331 (20%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQ----------IEGYGFIEFIS 132
L++GDL D+ + +A GE + V+++ N +GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 133 RAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTP------DHTIFVGDLAADV 185
A L NG +PN + +LNWA+ + + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
T+ L E F RY ST AK+V D++TG +KGYGFV+F + EQ A++EM GVF + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 246 MRIGPAT---------NKKTVSASYQNSQVAQSD-------------------------- 270
+++GP + N S+S N++ S
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMDFKRNHMSQF 294
Query: 271 -------------DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 317
DPNNTTVF+G L S+VT++ LR F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQ 354
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
+ DR AE A+ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|6321878|ref|NP_011954.1| Nam8p [Saccharomyces cerevisiae S288c]
gi|730108|sp|Q00539.2|NAM8_YEAST RecName: Full=Protein NAM8
gi|487934|gb|AAB68928.1| Nam8p: Putative RNA binding proteins [Saccharomyces cerevisiae]
gi|520596|dbj|BAA02016.1| Mre2 protein [Saccharomyces cerevisiae]
gi|190405867|gb|EDV09134.1| RNA-binding protein [Saccharomyces cerevisiae RM11-1a]
gi|207344656|gb|EDZ71726.1| YHR086Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|285809994|tpg|DAA06781.1| TPA: Nam8p [Saccharomyces cerevisiae S288c]
gi|323333247|gb|EGA74645.1| Nam8p [Saccharomyces cerevisiae AWRI796]
Length = 523
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 165/331 (49%), Gaps = 67/331 (20%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQ----------IEGYGFIEFIS 132
L++GDL D+ + +A GE + V+++ N +GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 133 RAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTP------DHTIFVGDLAADV 185
A L NG +PN + +LNWA+ + + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
T+ L E F RY ST AK+V D++TG +KGYGFV+F + EQ A++EM GVF + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 246 MRIGPAT------------NKKTVSASYQN----------SQVAQSDD------------ 271
+++GP + N+ + S + +N S ++ ++
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFKRNHMSQF 294
Query: 272 --------------DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 317
DPNNTTVF+G L S+VT++ LR F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQ 354
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
+ DR AE A+ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|259146840|emb|CAY80096.1| Nam8p [Saccharomyces cerevisiae EC1118]
gi|323348251|gb|EGA82500.1| Nam8p [Saccharomyces cerevisiae Lalvin QA23]
Length = 523
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 165/331 (49%), Gaps = 67/331 (20%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQ----------IEGYGFIEFIS 132
L++GDL D+ + +A GE + V+++ N +GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 133 RAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTP------DHTIFVGDLAADV 185
A L NG +PN + +LNWA+ + + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
T+ L E F RY ST AK+V D++TG +KGYGFV+F + EQ A++EM GVF + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 246 MRIGPAT------------NKKTVSASYQN----------SQVAQSDD------------ 271
+++GP + N+ + S + +N S ++ ++
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNTMGFKRNHMSQF 294
Query: 272 --------------DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 317
DPNNTTVF+G L S+VT++ LR F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQ 354
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
+ DR AE A+ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|323304584|gb|EGA58347.1| Nam8p [Saccharomyces cerevisiae FostersB]
Length = 523
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 165/331 (49%), Gaps = 67/331 (20%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQ----------IEGYGFIEFIS 132
L++GDL D+ + +A GE + V+++ N +GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 133 RAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTP------DHTIFVGDLAADV 185
A L NG +PN + +LNWA+ + + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
T+ L E F RY ST AK+V D++TG +KGYGFV+F + EQ A++EM GVF + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 246 MRIGPAT------------NKKTVSASYQN----------SQVAQSDD------------ 271
+++GP + N+ + S + +N S ++ ++
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFKRNHMSQF 294
Query: 272 --------------DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 317
DPNNTTVF+G L S+VT++ LR F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQ 354
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
+ DR AE A+ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|414592073|tpg|DAA42644.1| TPA: hypothetical protein ZEAMMB73_369374 [Zea mays]
gi|414592074|tpg|DAA42645.1| TPA: hypothetical protein ZEAMMB73_369374 [Zea mays]
gi|414592075|tpg|DAA42646.1| TPA: hypothetical protein ZEAMMB73_369374 [Zea mays]
Length = 207
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 107/170 (62%), Gaps = 20/170 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R+LWIG L WMDE YL CF + E++++ + RNKQTGQ EG+GF++F A +L+
Sbjct: 37 RSLWIGGLLPWMDEDYLYGCFTTSRELLSLVIKRNKQTGQSEGFGFLKFSDHTAAAHILK 96
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKR--------------------DDTPDHTIFVGDL 181
++NG MPN Q+F+LNWA+ K+ D + DH+IFVGDL
Sbjct: 97 SYNGQKMPNAVQDFKLNWATQQPAPKKLPDPDFKLDLATQQERHAAVDSSSDHSIFVGDL 156
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
A +VT YML F+ARYPS K AK++ D+ TG +K YGFV+FGD EQ++
Sbjct: 157 AYNVTGYMLHHVFKARYPSVKSAKIIFDKFTGLSKCYGFVQFGDVDEQIQ 206
Score = 41.2 bits (95), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 206 VVIDR--LTGRTKGYGFVRFGDESEQLRAMTEMNG--VFCSTRPMRIGPATN----KKTV 257
+VI R TG+++G+GF++F D + + NG + + + ++ AT KK
Sbjct: 66 LVIKRNKQTGQSEGFGFLKFSDHTAAAHILKSYNGQKMPNAVQDFKLNWATQQPAPKKLP 125
Query: 258 SASYQNSQVAQSD-----DDPNNTTVFVGNLDSIVTDEHLRELFS------QYGQLVHVK 306
++ Q + D ++ ++FVG+L VT L +F + +++ K
Sbjct: 126 DPDFKLDLATQQERHAAVDSSSDHSIFVGDLAYNVTGYMLHHVFKARYPSVKSAKIIFDK 185
Query: 307 IPAGKRC-GFVQFAD 320
+C GFVQF D
Sbjct: 186 FTGLSKCYGFVQFGD 200
>gi|401625439|gb|EJS43448.1| nam8p [Saccharomyces arboricola H-6]
Length = 527
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 163/335 (48%), Gaps = 71/335 (21%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQ----------IEGYGFIEFIS 132
L++GDL D++ + +A GE + V+++ N + +GY F++F S
Sbjct: 56 LYMGDLDPTWDKSTIRQIWASLGEANINVRMMWNNPSNNGPRSPLGQKNNQGYCFVDFPS 115
Query: 133 RAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTP----------DHTIFVGDL 181
A L NG +PN + +LNWA+ + + +++IFVGDL
Sbjct: 116 STHAANALLK-NGMLIPNFPNRKLKLNWATSSYSNNSNTSNTVNNTAKSGNNYSIFVGDL 174
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
A +VT+ L E F RY S AK+V D++TG +KGYGFV+F + EQ A++EM GVF
Sbjct: 175 APNVTESQLFELFINRYASASHAKIVHDQVTGMSKGYGFVKFNNADEQHLALSEMQGVFL 234
Query: 242 STRPMRIGP----------------------------------------ATNKKTVSASY 261
+ R +++GP NK ++ +Y
Sbjct: 235 NGRAIKVGPTAGQQQQNMHANGNSRSFSSLNNENMDPRFSSKNQSLLGNVANKMSLKRNY 294
Query: 262 QNSQV--------AQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 313
+ + DPNNTTVF+G L S+VT++ LR F +G +V+VKIP GK C
Sbjct: 295 TSQFIYPVQQQPSLTHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGC 354
Query: 314 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
GFVQ+ DR AE A+ + G + +RLSWGRS
Sbjct: 355 GFVQYVDRLSAEAAISGMQGFPIANSRVRLSWGRS 389
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T++IG L + E L F G +V VK+ K G GF++++ R AE +
Sbjct: 318 TVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGK------GCGFVQYVDRLSAEAAISG 371
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ N RL+W
Sbjct: 372 MQGFPIANSR--VRLSW 386
>gi|323308830|gb|EGA62067.1| Nam8p [Saccharomyces cerevisiae FostersO]
Length = 466
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 163/329 (49%), Gaps = 67/329 (20%)
Query: 86 IGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQ----------IEGYGFIEFISRA 134
+GDL D+ + +A GE + V+++ N +GY F++F S
Sbjct: 1 MGDLDPTWDKNTVRXIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPSST 60
Query: 135 GAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTP------DHTIFVGDLAADVTD 187
A L NG +PN + +LNWA+ + + +IFVGDLA +VT+
Sbjct: 61 HAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNVTE 119
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
L E F RY ST AK+V D++TG +KGYGFV+F + EQ A++EM GVF + R ++
Sbjct: 120 SQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRAIK 179
Query: 248 IGPAT------------NKKTVSASYQN----------SQVAQSDD-------------- 271
+GP + N+ + S + +N S ++ ++
Sbjct: 180 VGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMXFKRNHMSQFIY 239
Query: 272 ------------DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFA 319
DPNNTTVF+G L S+VT++ LR F +G +V+VKIP GK CGFVQ+
Sbjct: 240 PVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYV 299
Query: 320 DRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
DR AE A+ + G + +RLSWGRS
Sbjct: 300 DRLSAEAAIAGMQGFPIANSRVRLSWGRS 328
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 168/336 (50%), Gaps = 29/336 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E ++ F G + K+I + G + Y F+EF+ + A LQ
Sbjct: 14 RTLYVGNLDRQVTEAFILQLFGQIGPCKSCKMI--AEHGGNDPYCFVEFVEHSHAAAALQ 71
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + E ++NWA+ + K+D + H +FVGDL+++V L+ F A +
Sbjct: 72 TMNGRMILGKE--VKVNWATTPSSMKKDTSNHHHVFVGDLSSEVDTPDLKAAF-APFGQI 128
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+VV D T ++KGYGFV F ++ + A+ MNG + S R +R AT K
Sbjct: 129 SDARVVKDLQTNKSKGYGFVSFLNKVDAENAIQGMNGQWLSGRAIRTNWATRKPPPPRQP 188
Query: 262 QNSQVAQSDDDPN-----NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFV 316
+ ++ DD N NTTV++G + + +T+ +RE FS YG + V+I K F+
Sbjct: 189 ETTKQLSYDDVCNSSSYTNTTVYIGGVTTGLTEGKMRETFSHYGHIQEVRIFPDKGYAFI 248
Query: 317 QFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYEN-- 374
+F A A+ +NG+Q+ G ++ SWG+ S+ Q PN + GYY Y QG N
Sbjct: 249 RFMTHESAAHAIVSVNGSQINGHMVKCSWGKESSDPLYQAQPNTY-PGYYNYQQGQWNQY 307
Query: 375 ----------------YGYAAAAPQDPSMYYGGYPG 394
G AAA PQ S YY Y G
Sbjct: 308 YQQYATQQPQVQPQQYMGGAAAVPQQSSYYYPQYQG 343
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
DD T++VG+L VT+ + + F P K K++ + G Y FV F + S
Sbjct: 9 DDALPRTLYVGNLDRQVTEAFILQLFGQIGP-CKSCKMIAEH--GGNDPYCFVEFVEHSH 65
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ MNG + +++ AT ++ D N+ VFVG+L S V
Sbjct: 66 AAAALQTMNGRMILGKEVKVNWATTPSSM-----------KKDTSNHHHVFVGDLSSEVD 114
Query: 289 DEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
L+ F+ +GQ+ ++ K GFV F ++ AE A++ +NG L G+ IR
Sbjct: 115 TPDLKAAFAPFGQISDARVVKDLQTNKSKGYGFVSFLNKVDAENAIQGMNGQWLSGRAIR 174
Query: 343 LSW 345
+W
Sbjct: 175 TNW 177
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 270 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK-----RCGFVQFADRSCA 324
DDD T++VGNLD VT+ + +LF Q G K+ A C FV+F + S A
Sbjct: 8 DDDALPRTLYVGNLDRQVTEAFILQLFGQIGPCKSCKMIAEHGGNDPYC-FVEFVEHSHA 66
Query: 325 EEALRMLNGTQLGGQNIRLSWGRSPSN 351
AL+ +NG + G+ ++++W +PS+
Sbjct: 67 AAALQTMNGRMILGKEVKVNWATTPSS 93
>gi|4026|emb|CAA46011.1| NAM8 [Saccharomyces cerevisiae]
gi|228931|prf||1814447B NAM8 gene
Length = 523
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 163/331 (49%), Gaps = 67/331 (20%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQ----------IEGYGFIEFIS 132
L++GDL D+ + +A GE + V+++ N +GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 133 RAGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTP------DHTIFVGDLAADV 185
A L NG +PN + +LNWA+ + + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
T+ L E F RY ST AK+V D++TG +KGY V+F + EQ A++EM GVF + R
Sbjct: 175 TESQLLELFINRYASTSHAKIVHDQVTGMSKGYVLVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 246 MRIGPAT------------NKKTVSASYQN----------SQVAQSDD------------ 271
+++GP + N+ + S + +N S ++ ++
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFKRNHMSQF 294
Query: 272 --------------DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 317
DPNNTTVF+G L S+VT++ LR F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQ 354
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
+ DR AE A+ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|242045812|ref|XP_002460777.1| hypothetical protein SORBIDRAFT_02g034736 [Sorghum bicolor]
gi|241924154|gb|EER97298.1| hypothetical protein SORBIDRAFT_02g034736 [Sorghum bicolor]
Length = 171
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/131 (61%), Positives = 103/131 (78%), Gaps = 3/131 (2%)
Query: 260 SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFA 319
+YQ+SQ S++DPNNTTVFVG LDS V +E+LR++F+ +G++ +VKIP GK CGFVQF
Sbjct: 1 AYQSSQGISSENDPNNTTVFVGGLDSNVNEEYLRQIFTPHGEISYVKIPVGKHCGFVQFT 60
Query: 320 DRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPN-QWNA-GYYGYA-QGYENYG 376
RSCAEEA++MLNG+Q+GGQ +RLSWGR+ + + +Q D N Q+N YYGY QGYE YG
Sbjct: 61 SRSCAEEAIQMLNGSQIGGQKVRLSWGRTQNRQASQQDANSQYNGNSYYGYRQQGYEGYG 120
Query: 377 YAAAAPQDPSM 387
YAA QDPSM
Sbjct: 121 YAAPNTQDPSM 131
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L ++E YL F GE+ VK+ K GF++F SR+ AE +Q
Sbjct: 18 TVFVGGLDSNVNEEYLRQIFTPHGEISYVKIPVGKHC------GFVQFTSRSCAEEAIQM 71
Query: 143 FNGTPMPNGEQNFRLNWA 160
NG+ + G Q RL+W
Sbjct: 72 LNGSQI--GGQKVRLSWG 87
>gi|410081644|ref|XP_003958401.1| hypothetical protein KAFR_0G02320 [Kazachstania africana CBS 2517]
gi|372464989|emb|CCF59266.1| hypothetical protein KAFR_0G02320 [Kazachstania africana CBS 2517]
Length = 620
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 192/436 (44%), Gaps = 127/436 (29%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ----------------------- 118
RTLW+GDL DE + + G+ V++K++R K+
Sbjct: 37 RTLWMGDLDPTFDELTIKEIWKRLGKNVSIKLVRAKKNLLIPCSSFTNNSGGNSKNETEE 96
Query: 119 --------------TGQIE--GYGFIEFISRAGAERVLQTFNGTPMPN------------ 150
T Q+ GY FIEF S A+ L + N P+PN
Sbjct: 97 SSITINGISFIDPMTTQLHHAGYCFIEFDSLKDAQFGL-SLNSKPIPNFKSISTELETNP 155
Query: 151 -GEQNFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVV 207
G++ FRLNWAS GA + TP++++FVGDL+ T+ L + F+ + S K +V+
Sbjct: 156 SGQRTFRLNWAS-GATLQSSIPTTPEYSLFVGDLSPMTTEADLLKLFQKTFKSVKTVRVM 214
Query: 208 IDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT--------------- 252
D +TG ++ +GF+R DE E+ A+ +MNG R +R+ A
Sbjct: 215 TDPITGESRCFGFIRLSDEFEREEALDKMNGTLLHGRQLRVALANPRNANLQEQAPSQVV 274
Query: 253 -------------------NKKTVSASYQN-----SQVAQSDDDPNNTTVFVGNLDSIVT 288
+K+ + S N S SD+DP NTTVFVGNL+ +T
Sbjct: 275 EDKKKHNEPLLLETAKKLFSKELLKNSSSNVNDVKSNEDHSDNDPTNTTVFVGNLNCKIT 334
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG-- 346
++ L+++F +G + VKIP GK+CGFV+F ++ AE ++ L G + G IR+SWG
Sbjct: 335 EDELQKVFEPFGAIEKVKIPPGKKCGFVKFCNKIDAEASMYGLQGYFVAGSPIRISWGRS 394
Query: 347 ------------RSPS-----NKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYY 389
PS N+ +Q D + +N Y +EN + P P
Sbjct: 395 RNSNSSGSANAINRPSESSFMNENSQSDSSTYNLKYNPVI--WENKVWTEEVPAVP---- 448
Query: 390 GGYPGYGNYQQPQQPQ 405
NY+Q + PQ
Sbjct: 449 -------NYEQIRNPQ 457
>gi|156843736|ref|XP_001644934.1| hypothetical protein Kpol_530p46 [Vanderwaltozyma polyspora DSM
70294]
gi|156115587|gb|EDO17076.1| hypothetical protein Kpol_530p46 [Vanderwaltozyma polyspora DSM
70294]
Length = 587
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 167/337 (49%), Gaps = 79/337 (23%)
Query: 124 GYGFIEFISRAGAERVLQTFNGTPMPN-------------GEQNFRLNWASFGAGEKRDD 170
GY F+EF ++ A+ L + N P+PN G++NFRLNWAS GA +
Sbjct: 165 GYCFVEFQNQEDAQYAL-SLNSNPIPNILSDSNNLYTNPTGKRNFRLNWAS-GATLQSSI 222
Query: 171 --TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
TP+ ++FVGDL+ T+ L F+ +Y S K +V+ D +TG ++ +GF+RFGD+ E
Sbjct: 223 PVTPEFSLFVGDLSPTATEADLLSLFQQQYRSVKTVRVMTDPITGASRCFGFIRFGDQDE 282
Query: 229 QLRAMTEMNGVFCSTRPMRIGPAT------------------------------------ 252
+ RA++EMNGV+C RP+R+ AT
Sbjct: 283 RKRALSEMNGVWCQGRPLRVAYATPRNNNNIISNQQNTATQLSHHGNSYHNNSHNNGNNR 342
Query: 253 NKKTVSA--SYQNSQVAQ---------SDDDPNN---TTVFVGNLDSIVTDEHLRELFSQ 298
++K S+ +YQN+ A S + N +TVF+G L + + +R LF
Sbjct: 343 SRKNSSSILNYQNNYTANTNHGQPPQLSKSNSQNELVSTVFIGGLSPKINESQVRSLFKP 402
Query: 299 YGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS-------- 350
+G +V+VK+P GK CGFV+F +R AE A++ L G + G IRLSWG++ S
Sbjct: 403 FGNIVNVKLPPGKNCGFVKFENRIDAEAAIQGLQGFIVAGNPIRLSWGKASSMTSGNASN 462
Query: 351 ----NKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQ 383
N NQ N Y+ ++ + Y A + PQ
Sbjct: 463 NHNVNGNIDQLNNQNNVNYHVKSKPHFQYPMAKSVPQ 499
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 116/283 (40%), Gaps = 19/283 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTLW+GDL DE+ + + +V VK+IR K+ I I + +
Sbjct: 24 RTLWMGDLDPSFDESTIQQIWKSLDRLVTVKLIRAKKNLLIPCSSTINDSFSNSSNSLSP 83
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLA-ADVTDYMLQETF---RAR 197
T + T + + + S + E + ++ + + A +T + +T +
Sbjct: 84 TNSSTRLSSAGSSASPTTVSSSSAENKSNSITNNLSTDQTEDASITSNLDDDTNGGNQNL 143
Query: 198 YPSTKGAKVVIDRLTGRTK--GYGFVRFGDESEQLRAMTEMNG----VFCSTRPMRIGPA 251
+ ID T + GY FV F ++ + A++ + + + + P
Sbjct: 144 HKININGVSFIDPSTVQLHHAGYCFVEFQNQEDAQYALSLNSNPIPNILSDSNNLYTNP- 202
Query: 252 TNKKTVSASYQNSQVAQSDDDPN-NTTVFVGNLDSIVTDEHLRELFSQ-YGQLVHVK--- 306
T K+ ++ + QS ++FVG+L T+ L LF Q Y + V+
Sbjct: 203 TGKRNFRLNWASGATLQSSIPVTPEFSLFVGDLSPTATEADLLSLFQQQYRSVKTVRVMT 262
Query: 307 --IPAGKRC-GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 346
I RC GF++F D+ + AL +NG G+ +R+++
Sbjct: 263 DPITGASRCFGFIRFGDQDERKRALSEMNGVWCQGRPLRVAYA 305
>gi|365760349|gb|EHN02076.1| Nam8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 513
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 162/335 (48%), Gaps = 73/335 (21%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQ----------IEGYGFIEFIS 132
L++GDL D+ + + GE V V+++ N + +GY FI+F S
Sbjct: 46 LYMGDLDPTWDKNTIRQIWTSLGEANVNVRMMWNNPSNNGSRPSVGPKNNQGYCFIDFPS 105
Query: 133 RAGAERVLQTFNGTPMPNG-EQNFRLNWASF-------GAGEKRDDTPDHTIFVGDLAAD 184
A L NG +PN + +LNWA+ GA K ++ ++IFVGDLA +
Sbjct: 106 STHAANALLK-NGMLIPNFPNRKLKLNWATSSYSNNINGANMKSGNS--YSIFVGDLAPN 162
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
VT+ L F RY S AK+V D++TG +KGYGFV+F + E+ A++EM GVF + R
Sbjct: 163 VTESQLFGLFINRYASASHAKIVHDQVTGMSKGYGFVKFTNAGEEQLALSEMQGVFLNGR 222
Query: 245 PMRIGPATNKK--------TVSASYQNSQVAQSDDDP----------------------- 273
+++GP + ++ + +S + + DP
Sbjct: 223 AIKVGPTSGQQQQNVHVNGNIDQGRSSSSLNNENFDPRFHSKNQSLLGNVANNMSSKGNN 282
Query: 274 --------------------NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 313
NNTTVF+G L S+VT++ LR F +G +V+VKIP GK C
Sbjct: 283 VSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGC 342
Query: 314 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
GFVQ+ DR AE A+ + G + +RLSWGRS
Sbjct: 343 GFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 377
>gi|344287494|ref|XP_003415488.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Loxodonta africana]
Length = 287
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 125/188 (66%), Gaps = 7/188 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE VV+VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVVSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKTVS 258
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASRV 180
Query: 259 ASYQNSQV 266
+ SQ+
Sbjct: 181 KPVEYSQM 188
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVVSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG +P+ PA K A+Y Q D+ P ++FVG+L V D L
Sbjct: 64 KING-----KPLPGATPAKRFKLNYATYGK----QPDNSP-EYSLFVGDLTPDVDDGMLY 113
Query: 294 ELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
E F + G++V + K GFV+F D + AL G LG + +RLS
Sbjct: 114 EFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLS 171
>gi|294659018|ref|XP_461354.2| DEHA2F23276p [Debaryomyces hansenii CBS767]
gi|202953554|emb|CAG89760.2| DEHA2F23276p [Debaryomyces hansenii CBS767]
Length = 477
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 182/367 (49%), Gaps = 59/367 (16%)
Query: 18 AHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQ 77
++QYQ Q Q Q++P + + Y PP+ Q +A Q
Sbjct: 49 SNQYQSQVQ---QRKPYNRSNNYQANYPPRNNYQNSYDQGNHSAENQ------------- 92
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNK------QTGQIEGYGFIEF 130
LW+GDL DE + ++ GE VAVK+IR+K + GY F+ F
Sbjct: 93 ----NQLWMGDLDPSWDENAIKKIWSAFGETPVAVKIIRDKFAVDSTDSKSNAGYCFVSF 148
Query: 131 IS-RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAG----EKRDDTP------DHTIFVG 179
+ +A + VL+ NG +P + F+LNWAS G+G ++ + P D++IFVG
Sbjct: 149 ANQKAVSTAVLK--NGLQIPGSTKVFKLNWAS-GSGSTIPQENNFKPIGKTHNDYSIFVG 205
Query: 180 DLAADVTDYMLQETFRARYPS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
DL +DVT+ ML E F YP+ K AK++ D +T +KG+GFVRF Q +A+ EMNG
Sbjct: 206 DLGSDVTEPMLFECFNKVYPNQVKQAKIMFDPVTKLSKGFGFVRFSTSFTQQKALNEMNG 265
Query: 239 VFCSTRPMRIGPA-----------TNKKTVSASYQNSQVAQ------SDDDPNNTTVFVG 281
+RP+R+G A T K+ + N +AQ + DPNNTT+ +
Sbjct: 266 TIAGSRPIRVGMAAGSSNNAVGQDTFSKSETPVASNVHIAQPQPSLNAHTDPNNTTIIIK 325
Query: 282 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
L S +++ L F +G +V+ K+ + G +++ RS AE AL ++G+ +
Sbjct: 326 GLSSKFSEDELCSYFIAFGDIVYCKLSSDFNSGIIKYFLRSSAESALLFMHGSIANDCRV 385
Query: 342 RLSWGRS 348
++WG+S
Sbjct: 386 VVNWGKS 392
>gi|291400054|ref|XP_002716363.1| PREDICTED: tRNA selenocysteine associated protein 1 [Oryctolagus
cuniculus]
Length = 287
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 125/188 (66%), Gaps = 7/188 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + +LN+A++G ++ D++P++++FVGDL ADV + ML E F YP
Sbjct: 64 KINGKPLPGATPAKRLKLNYATYG--KQPDNSPEYSLFVGDLTADVDEGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKTVS 258
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++PMR+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPMRLSVAIPKASRV 180
Query: 259 ASYQNSQV 266
+ SQ+
Sbjct: 181 KPVEYSQM 188
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 18/178 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG +P+ PA K A+Y Q D+ P ++FVG+L + V + L
Sbjct: 64 KING-----KPLPGATPAKRLKLNYATYGK----QPDNSP-EYSLFVGDLTADVDEGMLY 113
Query: 294 ELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
E F + G++V + K GFV+F D + AL G LG + +RLS
Sbjct: 114 EFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPMRLS 171
>gi|170592088|ref|XP_001900801.1| RNA recognition motif. [Brugia malayi]
gi|158591668|gb|EDP30272.1| RNA recognition motif [Brugia malayi]
Length = 421
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 153/283 (54%), Gaps = 15/283 (5%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+++G+L + E ++ T F G V KVI + G + Y F+EF A + LQ
Sbjct: 74 RTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFD---GTNDPYAFVEFADHYTAAQALQ 130
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
N + E+ ++NWA+ + + DT H +FVGDL+ +V + L++ F A +
Sbjct: 131 AMNKRVLL--EKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAF-APFGE 187
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
AKV+ D T ++KGYGFV + E RA+ +MNG + R +R AT K T + +
Sbjct: 188 VSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTGA 247
Query: 261 ----YQNSQVAQSD----DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 312
Y S++ D P+NT+V+VGN++S DE LR F ++G+++ V+I +
Sbjct: 248 GDGQYGRSELNYDDVYNQTGPDNTSVYVGNVNSSANDEDLRAAFDKFGRILEVRIFKSQG 307
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
FV+F + A A+ +NG +L GQNI+ SWGR+P Q
Sbjct: 308 YAFVRFDKKDSACNAICKMNGQELCGQNIKCSWGRTPEGHSQQ 350
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 262 QNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP---AGKRCGFVQF 318
QN+ +D TV+VGNLD +T++ + LF Q G + K+ FV+F
Sbjct: 60 QNAGFDTGSEDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEF 119
Query: 319 ADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ 360
AD A +AL+ +N L + ++++W P + QA+ D ++
Sbjct: 120 ADHYTAAQALQAMNKRVLLEKEMKVNWATEPGS-QAKVDTSK 160
>gi|73950095|ref|XP_535338.2| PREDICTED: tRNA selenocysteine 1-associated protein 1 isoform 1
[Canis lupus familiaris]
Length = 287
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 125/188 (66%), Gaps = 7/188 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKTVS 258
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASRV 180
Query: 259 ASYQNSQV 266
+ SQ+
Sbjct: 181 KPVEYSQM 188
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG +P+ PA K A+Y Q D+ P ++FVG+L V D L
Sbjct: 64 KING-----KPLPGATPAKRFKLNYATYGK----QPDNSP-EYSLFVGDLTPDVDDGMLY 113
Query: 294 ELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
E F + G++V + K GFV+F D + AL G LG + +RLS
Sbjct: 114 EFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLS 171
>gi|355726287|gb|AES08822.1| tRNA selenocysteine 1 associated protein 1 [Mustela putorius furo]
Length = 286
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 125/188 (66%), Gaps = 7/188 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKTVS 258
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASRV 180
Query: 259 ASYQNSQV 266
+ SQ+
Sbjct: 181 KPVEYSQM 188
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG +P+ PA K A+Y Q D+ P ++FVG+L V D L
Sbjct: 64 KING-----KPLPGATPAKRFKLNYATYGK----QPDNSP-EYSLFVGDLTPDVDDGMLY 113
Query: 294 ELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
E F + G++V + K GFV+F D + AL G LG + +RLS
Sbjct: 114 EFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLS 171
>gi|363742248|ref|XP_417743.3| PREDICTED: uncharacterized protein LOC419597 [Gallus gallus]
Length = 287
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 120/176 (68%), Gaps = 7/176 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVV-AVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE+V +VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL ADV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTADVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
S +G KVV+D+ G +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K
Sbjct: 122 SCRGGKVVLDQ-AGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 176
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 18/186 (9%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG +P+ PA K A+Y Q D+ P ++FVG+L + V D L
Sbjct: 64 KING-----KPLPGATPAKRFKLNYATYGK----QPDNSP-EYSLFVGDLTADVDDGMLY 113
Query: 294 ELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWG 346
E F + G++V + K GFV+F D + AL G LG + +RLS
Sbjct: 114 EFFVKVYPSCRGGKVVLDQAGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVA 173
Query: 347 RSPSNK 352
+N+
Sbjct: 174 IPKANR 179
>gi|354472393|ref|XP_003498424.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Cricetulus griseus]
Length = 287
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 125/188 (66%), Gaps = 7/188 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKTVS 258
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASRV 180
Query: 259 ASYQNSQV 266
+ SQ+
Sbjct: 181 KPVEYSQM 188
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG +P+ PA K A+Y Q D+ P ++FVG+L V D L
Sbjct: 64 KING-----KPLPGATPAKRFKLNYATYGK----QPDNSP-EYSLFVGDLTPDVDDGMLY 113
Query: 294 ELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
E F + G++V + K GFV+F D + AL G LG + +RLS
Sbjct: 114 EFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLS 171
>gi|348571058|ref|XP_003471313.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Cavia
porcellus]
Length = 287
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 125/188 (66%), Gaps = 7/188 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKTVS 258
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASRV 180
Query: 259 ASYQNSQV 266
+ SQ+
Sbjct: 181 KPVEYSQM 188
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG +P+ PA K A+Y Q D+ P ++FVG+L V D L
Sbjct: 64 KING-----KPLPGATPAKRFKLNYATYGK----QPDNSP-EYSLFVGDLTPDVDDGMLY 113
Query: 294 ELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
E F + G++V + K GFV+F D + AL G LG + +RLS
Sbjct: 114 EFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLS 171
>gi|8923460|ref|NP_060316.1| tRNA selenocysteine 1-associated protein 1 [Homo sapiens]
gi|149694993|ref|XP_001504030.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Equus
caballus]
gi|296207254|ref|XP_002750563.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Callithrix
jacchus]
gi|332245217|ref|XP_003271759.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 isoform 1
[Nomascus leucogenys]
gi|335290818|ref|XP_003356292.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Sus
scrofa]
gi|397515828|ref|XP_003828145.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Pan
paniscus]
gi|403308350|ref|XP_003944628.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Saimiri
boliviensis boliviensis]
gi|410966601|ref|XP_003989819.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Felis catus]
gi|426328634|ref|XP_004025356.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|426328636|ref|XP_004025357.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 isoform 2
[Gorilla gorilla gorilla]
gi|74761781|sp|Q9NX07.1|TSAP1_HUMAN RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName:
Full=SECp43; AltName: Full=tRNA
selenocysteine-associated protein 1
gi|7020651|dbj|BAA91217.1| unnamed protein product [Homo sapiens]
gi|12653787|gb|AAH00680.1| TRNA selenocysteine 1 associated protein 1 [Homo sapiens]
gi|119628094|gb|EAX07689.1| tRNA selenocysteine associated protein 1, isoform CRA_c [Homo
sapiens]
gi|261861114|dbj|BAI47079.1| tRNA selenocysteine 1 associated protein 1 [synthetic construct]
gi|410217052|gb|JAA05745.1| tRNA selenocysteine 1 associated protein 1 [Pan troglodytes]
gi|410246780|gb|JAA11357.1| tRNA selenocysteine 1 associated protein 1 [Pan troglodytes]
gi|410287892|gb|JAA22546.1| tRNA selenocysteine 1 associated protein 1 [Pan troglodytes]
gi|410350233|gb|JAA41720.1| tRNA selenocysteine 1 associated protein 1 [Pan troglodytes]
Length = 287
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 125/188 (66%), Gaps = 7/188 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKTVS 258
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASRV 180
Query: 259 ASYQNSQV 266
+ SQ+
Sbjct: 181 KPVEYSQM 188
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG +P+ PA K A+Y Q D+ P ++FVG+L V D L
Sbjct: 64 KING-----KPLPGATPAKRFKLNYATYGK----QPDNSP-EYSLFVGDLTPDVDDGMLY 113
Query: 294 ELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
E F + G++V + K GFV+F D + AL G LG + +RLS
Sbjct: 114 EFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLS 171
>gi|395856824|ref|XP_003800818.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Otolemur
garnettii]
Length = 287
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 125/188 (66%), Gaps = 7/188 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKTVS 258
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASRV 180
Query: 259 ASYQNSQV 266
+ SQ+
Sbjct: 181 KPVEYSQM 188
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG +P+ PA K A+Y Q D+ P ++FVG+L V D L
Sbjct: 64 KING-----KPLPGATPAKRFKLNYATYGK----QPDNSP-EYSLFVGDLTPDVDDGMLY 113
Query: 294 ELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
E F + G++V + K GFV+F D + AL G LG + +RLS
Sbjct: 114 EFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLS 171
>gi|115495097|ref|NP_001069435.1| tRNA selenocysteine 1-associated protein 1 [Bos taurus]
gi|122145885|sp|Q1RMJ7.1|TSAP1_BOVIN RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName:
Full=tRNA selenocysteine-associated protein 1
gi|92098413|gb|AAI14859.1| TRNA selenocysteine 1 associated protein 1 [Bos taurus]
gi|296490008|tpg|DAA32121.1| TPA: tRNA selenocysteine 1-associated protein 1 [Bos taurus]
gi|440905999|gb|ELR56315.1| tRNA selenocysteine 1-associated protein 1 [Bos grunniens mutus]
Length = 287
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 124/188 (65%), Gaps = 7/188 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNKKTVS 258
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G ++P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAIGLGSKPVRLSVAIPKASRV 180
Query: 259 ASYQNSQV 266
+ SQ+
Sbjct: 181 KPVEYSQM 188
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG +P+ PA K A+Y Q D+ P ++FVG+L V D L
Sbjct: 64 KING-----KPLPGATPAKRFKLNYATYGK----QPDNSP-EYSLFVGDLTPDVDDGMLY 113
Query: 294 ELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
E F + G++V + K GFV+F D + AL G LG + +RLS
Sbjct: 114 EFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAIGLGSKPVRLS 171
>gi|426221836|ref|XP_004005112.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Ovis aries]
Length = 287
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 124/188 (65%), Gaps = 7/188 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNKKTVS 258
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G ++P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAIGLGSKPVRLSVAIPKASRV 180
Query: 259 ASYQNSQV 266
+ SQ+
Sbjct: 181 KPVEYSQM 188
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG +P+ PA K A+Y Q D+ P ++FVG+L V D L
Sbjct: 64 KING-----KPLPGATPAKRFKLNYATYGK----QPDNSP-EYSLFVGDLTPDVDDGMLY 113
Query: 294 ELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
E F + G++V + K GFV+F D + AL G LG + +RLS
Sbjct: 114 EFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAIGLGSKPVRLS 171
>gi|12711700|ref|NP_075416.1| tRNA selenocysteine 1-associated protein 1 [Rattus norvegicus]
gi|81917757|sp|Q9QZI7.1|TSAP1_RAT RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName:
Full=SECp43; AltName: Full=tRNA
selenocysteine-associated protein 1
gi|5853317|gb|AAD54419.1|AF181856_1 tRNA selenocysteine associated protein [Rattus norvegicus]
Length = 287
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 124/188 (65%), Gaps = 7/188 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKTVS 258
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V +P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVAIPKASRV 180
Query: 259 ASYQNSQV 266
+ SQ+
Sbjct: 181 KPVEYSQM 188
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG +P+ PA K A+Y Q D+ P ++FVG+L V D L
Sbjct: 64 KING-----KPLPGATPAKRFKLNYATYGK----QPDNSP-EYSLFVGDLTPDVDDGMLY 113
Query: 294 ELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
E F + G++V + K GFV+F D + AL G LG + +RLS
Sbjct: 114 EFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLS 171
>gi|402587661|gb|EJW81596.1| nucleolysin TIAR [Wuchereria bancrofti]
Length = 440
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 156/284 (54%), Gaps = 17/284 (5%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+++G+L + E ++ T F G V KVI + G + Y F+EF A + LQ
Sbjct: 93 RTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFD---GTNDPYAFVEFADHYTAAQALQ 149
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
N + E+ ++NWA+ + + DT H +FVGDL+ +V + L++ F A +
Sbjct: 150 AMNKRVLL--EKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAF-APFGE 206
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
AKV+ D T ++KGYGFV + E RA+ +MNG + R +R AT K T + +
Sbjct: 207 VSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTGA 266
Query: 261 ----YQNSQVAQSD----DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 312
Y S++ D P+NT+V+VGN++S DE LR F ++G+++ V+I +
Sbjct: 267 GDGQYGRSELNYDDVYNQTGPDNTSVYVGNVNSNANDEDLRAAFDKFGRILEVRIFKSQG 326
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS--NKQA 354
FV+F + A A+ +NG +L GQNI+ SWGR+P N+QA
Sbjct: 327 YAFVRFDKKDSACNAICKMNGQELCGQNIKCSWGRTPEGHNQQA 370
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 262 QNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP---AGKRCGFVQF 318
QN+ +D TV+VGNLD +T++ + LF Q G + K+ FV+F
Sbjct: 79 QNAGFDTGSEDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEF 138
Query: 319 ADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ 360
AD A +AL+ +N L + ++++W P + QA+ D ++
Sbjct: 139 ADHYTAAQALQAMNKRVLLEKEMKVNWATEPGS-QAKVDTSK 179
>gi|402853636|ref|XP_003891498.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Papio
anubis]
gi|355764244|gb|EHH62272.1| hypothetical protein EGM_20511 [Macaca fascicularis]
gi|380785637|gb|AFE64694.1| tRNA selenocysteine 1-associated protein 1 [Macaca mulatta]
gi|383411005|gb|AFH28716.1| tRNA selenocysteine 1-associated protein 1 [Macaca mulatta]
gi|384939910|gb|AFI33560.1| tRNA selenocysteine 1-associated protein 1 [Macaca mulatta]
Length = 287
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 124/188 (65%), Gaps = 7/188 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKTVS 258
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V +P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGAKPVRLSVAIPKASRV 180
Query: 259 ASYQNSQV 266
+ SQ+
Sbjct: 181 KPVEYSQM 188
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG +P+ PA K A+Y Q D+ P ++FVG+L V D L
Sbjct: 64 KING-----KPLPGATPAKRFKLNYATYGK----QPDNSP-EYSLFVGDLTPDVDDGMLY 113
Query: 294 ELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
E F + G++V + K GFV+F D + AL G LG + +RLS
Sbjct: 114 EFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGAKPVRLS 171
>gi|393909208|gb|EFO19127.2| hypothetical protein LOAG_09365 [Loa loa]
Length = 421
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 156/284 (54%), Gaps = 17/284 (5%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+++G+L + E ++ T F G V KVI + G + Y F+EF A + LQ
Sbjct: 74 RTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFD---GTNDPYAFVEFADHYTAAQALQ 130
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
N + E+ ++NWA+ + + DT H +FVGDL+ +V + L++ F A +
Sbjct: 131 AMNKRVLL--EKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAF-APFGE 187
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
AKV+ D T ++KGYGFV + E RA+ +MNG + R +R AT K T + +
Sbjct: 188 VSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTGA 247
Query: 261 ----YQNSQVAQSD----DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 312
Y +++ D P+NT+V+VGN++S DE LR F ++G+++ V+I +
Sbjct: 248 GDGQYGRTELNYDDVYNQTGPDNTSVYVGNVNSSANDEDLRAAFDKFGRILEVRIFKSQG 307
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS--NKQA 354
FV+F + A A+ +NG +L GQNI+ SWGR+P N+QA
Sbjct: 308 YAFVRFDKKDSACNAICKMNGQELCGQNIKCSWGRTPEGHNQQA 351
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 262 QNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP---AGKRCGFVQF 318
QN+ +D TV+VGNLD +T++ + LF Q G + K+ FV+F
Sbjct: 60 QNAGFDTGSEDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEF 119
Query: 319 ADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ 360
AD A +AL+ +N L + ++++W P + QA+ D ++
Sbjct: 120 ADHYTAAQALQAMNKRVLLEKEMKVNWATEPGS-QAKVDTSK 160
>gi|301755122|ref|XP_002913378.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like isoform
1 [Ailuropoda melanoleuca]
Length = 287
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 125/188 (66%), Gaps = 7/188 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKTVS 258
S +G KVV+D+ TG +KGYGFV+F DE EQ RA++E G V ++P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALSECQGAVGLGSKPVRLSVAIPKASRV 180
Query: 259 ASYQNSQV 266
+ SQ+
Sbjct: 181 KPVEYSQM 188
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG +P+ PA K A+Y Q D+ P ++FVG+L V D L
Sbjct: 64 KING-----KPLPGATPAKRFKLNYATYGK----QPDNSP-EYSLFVGDLTPDVDDGMLY 113
Query: 294 ELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
E F + G++V + K GFV+F D + AL G LG + +RLS
Sbjct: 114 EFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALSECQGAVGLGSKPVRLS 171
>gi|312086091|ref|XP_003144941.1| hypothetical protein LOAG_09365 [Loa loa]
Length = 394
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 156/284 (54%), Gaps = 17/284 (5%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+++G+L + E ++ T F G V KVI + G + Y F+EF A + LQ
Sbjct: 47 RTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFD---GTNDPYAFVEFADHYTAAQALQ 103
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
N + E+ ++NWA+ + + DT H +FVGDL+ +V + L++ F A +
Sbjct: 104 AMNKRVLL--EKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAF-APFGE 160
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
AKV+ D T ++KGYGFV + E RA+ +MNG + R +R AT K T + +
Sbjct: 161 VSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTGA 220
Query: 261 ----YQNSQVAQSD----DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 312
Y +++ D P+NT+V+VGN++S DE LR F ++G+++ V+I +
Sbjct: 221 GDGQYGRTELNYDDVYNQTGPDNTSVYVGNVNSSANDEDLRAAFDKFGRILEVRIFKSQG 280
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS--NKQA 354
FV+F + A A+ +NG +L GQNI+ SWGR+P N+QA
Sbjct: 281 YAFVRFDKKDSACNAICKMNGQELCGQNIKCSWGRTPEGHNQQA 324
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 262 QNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP---AGKRCGFVQF 318
QN+ +D TV+VGNLD +T++ + LF Q G + K+ FV+F
Sbjct: 33 QNAGFDTGSEDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEF 92
Query: 319 ADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ 360
AD A +AL+ +N L + ++++W P + QA+ D ++
Sbjct: 93 ADHYTAAQALQAMNKRVLLEKEMKVNWATEPGS-QAKVDTSK 133
>gi|355557743|gb|EHH14523.1| hypothetical protein EGK_00465, partial [Macaca mulatta]
Length = 242
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 124/188 (65%), Gaps = 7/188 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKTVS 258
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V +P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGAKPVRLSVAIPKASRV 180
Query: 259 ASYQNSQV 266
+ SQ+
Sbjct: 181 KPVEYSQM 188
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG +P+ PA K A+Y Q D+ P ++FVG+L V D L
Sbjct: 64 KING-----KPLPGATPAKRFKLNYATYGK----QPDNSP-EYSLFVGDLTPDVDDGMLY 113
Query: 294 ELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
E F + G++V + K GFV+F D + AL G LG + +RLS
Sbjct: 114 EFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGAKPVRLS 171
>gi|197101902|ref|NP_001127022.1| tRNA selenocysteine 1-associated protein 1 [Pongo abelii]
gi|75070420|sp|Q5R462.1|TSAP1_PONAB RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName:
Full=tRNA selenocysteine-associated protein 1
gi|55733553|emb|CAH93454.1| hypothetical protein [Pongo abelii]
Length = 287
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 124/188 (65%), Gaps = 7/188 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+ ++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYVTYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKTVS 258
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASRV 180
Query: 259 ASYQNSQV 266
+ SQ+
Sbjct: 181 KPVEYSQM 188
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG +P+ PA K +Y Q D+ P ++FVG+L V D L
Sbjct: 64 KING-----KPLPGATPAKRFKLNYVTYGK----QPDNSP-EYSLFVGDLTPDVDDGMLY 113
Query: 294 ELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
E F + G++V + K GFV+F D + AL G LG + +RLS
Sbjct: 114 EFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLS 171
>gi|62821783|ref|NP_082201.2| tRNA selenocysteine 1-associated protein 1 [Mus musculus]
gi|81912790|sp|Q80VC6.2|TSAP1_MOUSE RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName:
Full=SECp43; AltName: Full=tRNA
selenocysteine-associated protein 1
gi|33416825|gb|AAH55454.1| TRNA selenocysteine 1 associated protein 1 [Mus musculus]
gi|66840156|gb|AAH48840.2| TRNA selenocysteine 1 associated protein 1 [Mus musculus]
gi|74225435|dbj|BAE31634.1| unnamed protein product [Mus musculus]
gi|148698163|gb|EDL30110.1| tRNA selenocysteine associated protein 1, isoform CRA_a [Mus
musculus]
Length = 287
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 123/188 (65%), Gaps = 7/188 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKTVS 258
S +G KVV+D TG +KGYGFV+F DE EQ RA+TE G V +P+R+ A K +
Sbjct: 122 SCRGGKVVLDP-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVAIPKASRV 180
Query: 259 ASYQNSQV 266
+ SQ+
Sbjct: 181 KPVEYSQM 188
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG +P+ PA K A+Y Q D+ P ++FVG+L V D L
Sbjct: 64 KING-----KPLPGATPAKRFKLNYATYGK----QPDNSP-EYSLFVGDLTPDVDDGMLY 113
Query: 294 ELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
E F + G++V K GFV+F D + AL G LG + +RLS
Sbjct: 114 EFFVKVYPSCRGGKVVLDPTGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLS 171
>gi|116283942|gb|AAH05795.1| Trnau1ap protein [Mus musculus]
Length = 221
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 123/188 (65%), Gaps = 7/188 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKTVS 258
S +G KVV+D TG +KGYGFV+F DE EQ RA+TE G V +P+R+ A K +
Sbjct: 122 SCRGGKVVLDP-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVAIPKASRV 180
Query: 259 ASYQNSQV 266
+ SQ+
Sbjct: 181 KPVEYSQM 188
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG +P+ PA K A+Y Q D+ P ++FVG+L V D L
Sbjct: 64 KING-----KPLPGATPAKRFKLNYATYGK----QPDNSP-EYSLFVGDLTPDVDDGMLY 113
Query: 294 ELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
E F + G++V K GFV+F D + AL G LG + +RLS
Sbjct: 114 EFFVKVYPSCRGGKVVLDPTGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLS 171
>gi|387019429|gb|AFJ51832.1| tRNA selenocysteine 1-associated protein 1 [Crotalus adamanteus]
Length = 286
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 120/176 (68%), Gaps = 7/176 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVV-AVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA G++V +VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGQLVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FVGDL+ DV D M+ E F YP
Sbjct: 64 KINGKPLPGATPTKRFKLNYATYG--KQPDNSPEYSLFVGDLSPDVDDGMIYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
S +G KVV+D+ TG +KGYGFV+F DE EQ RA+ E G V ++P+R+ A K
Sbjct: 122 SCRGGKVVVDQ-TGVSKGYGFVKFSDELEQKRALVECQGAVGLGSKPIRLSVAIPK 176
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 18/186 (9%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGQLVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG +P+ P K A+Y Q D+ P ++FVG+L V D +
Sbjct: 64 KING-----KPLPGATPTKRFKLNYATYGK----QPDNSP-EYSLFVGDLSPDVDDGMIY 113
Query: 294 ELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWG 346
E F + G++V + K GFV+F+D + AL G LG + IRLS
Sbjct: 114 EFFVKVYPSCRGGKVVVDQTGVSKGYGFVKFSDELEQKRALVECQGAVGLGSKPIRLSVA 173
Query: 347 RSPSNK 352
+N+
Sbjct: 174 IPKANR 179
>gi|308801969|ref|XP_003078298.1| DNA-binding protein (ISS) [Ostreococcus tauri]
gi|116056749|emb|CAL53038.1| DNA-binding protein (ISS) [Ostreococcus tauri]
Length = 452
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 151/317 (47%), Gaps = 56/317 (17%)
Query: 94 DETYLNTCFAHTGEVVA-VKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTP----- 147
D Y+ F+ + +A VK+IRN+ TG EGYGFIEF SR A+ + + +G+
Sbjct: 62 DAAYVYYAFSSVWKSLAHVKLIRNRATGLSEGYGFIEFNSRDEADSLSKLLSGSQCRERC 121
Query: 148 -----MPNGEQNFRLNWA------SFGAG-----------------------EKRDDTPD 173
M E ++ A S G+ E D D
Sbjct: 122 TVNEMMTTKEDAVKMYSAPTTPKQSEGSSRSVLAPRSESGSSEGSPEIEADMEDEADIQD 181
Query: 174 HTIFV--------------GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYG 219
T V GDL +DV + +L E F+++ + A+VV+D T R KGYG
Sbjct: 182 ETDIVDDGNVQTADYSVFVGDLGSDVNETILCEHFKSKCSTAHNARVVVDLKTFRPKGYG 241
Query: 220 FVRFGDESEQLRAMTEMNGVFC--STRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTT 277
FV F E + + A++ G C S R MR+ A +K D DP NTT
Sbjct: 242 FVDFKTEKDYMTALSAFQGSRCGSSDRQMRVCNAFERKPEPVIDVTKFHDFEDMDPQNTT 301
Query: 278 VFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLG 337
+F+GNLD VT+EHLR +F ++G++ + K K CGFV F DR A EA+ L+G+ +G
Sbjct: 302 IFIGNLDHNVTEEHLRVVFEEFGEIAYAKATPKKGCGFVHFFDRQDATEAIENLHGSMIG 361
Query: 338 GQNIRLSWGRSPSNKQA 354
+ +RLSWGR + K A
Sbjct: 362 SKRVRLSWGRHNATKCA 378
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 21/190 (11%)
Query: 83 TLWIGDLQYWMDETYLNTCF-AHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
++++GDL ++ET L F + +V+ + +T + +GYGF++F + L
Sbjct: 197 SVFVGDLGSDVNETILCEHFKSKCSTAHNARVVVDLKTFRPKGYGFVDFKTEKDYMTALS 256
Query: 142 TFNGTPMPNGEQNFR------------LNWASFGAGEKRDDTPDHTIFVGDLAADVTDYM 189
F G+ + ++ R ++ F E D + TIF+G+L +VT+
Sbjct: 257 AFQGSRCGSSDRQMRVCNAFERKPEPVIDVTKFHDFEDM-DPQNTTIFIGNLDHNVTEEH 315
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
L+ F + ++ + T + KG GFV F D + A+ ++G ++ +R+
Sbjct: 316 LRVVFE------EFGEIAYAKATPK-KGCGFVHFFDRQDATEAIENLHGSMIGSKRVRLS 368
Query: 250 PATNKKTVSA 259
+ T A
Sbjct: 369 WGRHNATKCA 378
>gi|196008869|ref|XP_002114300.1| hypothetical protein TRIADDRAFT_57967 [Trichoplax adhaerens]
gi|190583319|gb|EDV23390.1| hypothetical protein TRIADDRAFT_57967 [Trichoplax adhaerens]
Length = 344
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 116/174 (66%), Gaps = 7/174 (4%)
Query: 89 LQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTP 147
L+ +MDET++ FA G V++VK+IRN+ G GY F++F AE L+ NG P
Sbjct: 46 LETYMDETFIRNAFASVGRTVLSVKLIRNRVVGGPAGYCFVDFPDPQSAEDCLKQVNGLP 105
Query: 148 MP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAK 205
+P N ++ F+LNWA+ GA + + P+ +IFVGDL DVTD +L+ F R+PS KGAK
Sbjct: 106 LPGSNPQKRFKLNWATHGARDAGN--PEFSIFVGDLTPDVTDLVLRNFFCERFPSCKGAK 163
Query: 206 VVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNKKTVS 258
VVID+ G ++GYGFVRFGDE+E RA+ EM G C RP+R+ AT KKT++
Sbjct: 164 VVIDQ-GGNSRGYGFVRFGDENEHTRALNEMQGASGCGGRPIRVSLATPKKTMN 216
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 16/163 (9%)
Query: 189 MLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248
++ F + + K++ +R+ G GY FV F D + ++NG+ P+
Sbjct: 54 FIRNAFASVGRTVLSVKLIRNRVVGGPAGYCFVDFPDPQSAEDCLKQVNGL-----PL-- 106
Query: 249 GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQY-----GQLV 303
P +N + + A+ +P ++FVG+L VTD LR F + G V
Sbjct: 107 -PGSNPQKRFKLNWATHGARDAGNPE-FSIFVGDLTPDVTDLVLRNFFCERFPSCKGAKV 164
Query: 304 HVKIPAGKR-CGFVQFADRSCAEEALRMLNGTQ-LGGQNIRLS 344
+ R GFV+F D + AL + G GG+ IR+S
Sbjct: 165 VIDQGGNSRGYGFVRFGDENEHTRALNEMQGASGCGGRPIRVS 207
>gi|126328777|ref|XP_001365071.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Monodelphis domestica]
Length = 287
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 119/176 (67%), Gaps = 7/176 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FV DL+ DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVRDLSPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
S +G KVV+D+ G +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K
Sbjct: 122 SCRGGKVVLDQ-AGISKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 176
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 103/254 (40%), Gaps = 51/254 (20%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG +P+ PA K A+Y Q D+ P ++FV +L V D L
Sbjct: 64 KING-----KPLPGATPAKRFKLNYATYGK----QPDNSPE-YSLFVRDLSPDVDDGMLY 113
Query: 294 ELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWG 346
E F + G++V + K GFV+F D + AL G LG + +RLS
Sbjct: 114 EFFVKVYPSCRGGKVVLDQAGISKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVA 173
Query: 347 RSPSNKQAQPDPNQWNAGY-----------------YGYAQGYENYGYAAAAPQDPSMYY 389
+N+ P +++ Y +GY Q +Y Y+
Sbjct: 174 IPKANRVK---PMEYSQMYSYSLNQYYQQYQNYYAQWGYDQNTGSYSYS----------- 219
Query: 390 GGYPGYGNYQQPQQ 403
YP YG Q Q
Sbjct: 220 --YPQYGYTQSTMQ 231
>gi|159480296|ref|XP_001698220.1| hypothetical protein CHLREDRAFT_193148 [Chlamydomonas reinhardtii]
gi|158273718|gb|EDO99505.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1212
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 113/170 (66%), Gaps = 7/170 (4%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++FVGDL +V D+ L+ FR +PS + AKV++D +TGR+KG+GFVRF E E+ RA+
Sbjct: 13 SLFVGDLPPEVHDHFLESFFRQYFPSVRSAKVMMDNITGRSKGFGFVRFAVEGERDRALN 72
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQS------DDDPNNTTVFVGNLDSIVT 288
EMNGVF S+R + A+ ++ N+ + + DP NTT+FVG L + V+
Sbjct: 73 EMNGVFISSRQHTLS-ASAVSALAPCASNTHCRNTPTQLPGELDPQNTTLFVGGLSAHVS 131
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 338
++ LR +F +YG++ +VKIP GK CGFV FADR AE A++ +NGT +GG
Sbjct: 132 EDALRGVFGRYGEISYVKIPPGKGCGFVHFADRQAAEYAMQEVNGTIIGG 181
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 22/173 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFA-HTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+L++GDL + + +L + F + V + KV+ + TG+ +G+GF+ F +R L
Sbjct: 13 SLFVGDLPPEVHDHFLESFFRQYFPSVRSAKVMMDNITGRSKGFGFVRFAVEGERDRALN 72
Query: 142 TFNGTPMPNGEQNFRLNWAS----FGAGEKRDDTP----------DHTIFVGDLAADVTD 187
NG + + + + S + +TP + T+FVG L+A V++
Sbjct: 73 EMNGVFISSRQHTLSASAVSALAPCASNTHCRNTPTQLPGELDPQNTTLFVGGLSAHVSE 132
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L+ F RY K+ KG GFV F D AM E+NG
Sbjct: 133 DALRGVF-GRYGEISYVKI------PPGKGCGFVHFADRQAAEYAMQEVNGTI 178
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Query: 57 ATQAAAPQAAGVAVPPQQQGQPGEI----RTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
A A AP A+ PGE+ TL++G L + E L F GE+ VK
Sbjct: 90 AVSALAPCASNTHCRNTPTQLPGELDPQNTTLFVGGLSAHVSEDALRGVFGRYGEISYVK 149
Query: 113 VIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNF 155
+ K G GF+ F R AE +Q NGT + G N+
Sbjct: 150 IPPGK------GCGFVHFADRQAAEYAMQEVNGT-IIGGSANY 185
>gi|395521932|ref|XP_003765068.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Sarcophilus
harrisii]
Length = 287
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 123/188 (65%), Gaps = 7/188 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P+P + F+LN+A++G ++ D++P++++FV DL+ DV D ML E F YP
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVRDLSPDVDDGMLYEFFVKVYP 121
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKTVS 258
S +G KVV+D+ G +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K
Sbjct: 122 SCRGGKVVLDQ-AGISKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKANRV 180
Query: 259 ASYQNSQV 266
+ SQ+
Sbjct: 181 KPLEYSQM 188
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 35/246 (14%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +RLTG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 235 EMNGVFCSTRPM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG +P+ PA K A+Y Q D+ P ++FV +L V D L
Sbjct: 64 KING-----KPLPGATPAKRFKLNYATYGK----QPDNSPE-YSLFVRDLSPDVDDGMLY 113
Query: 294 ELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWG 346
E F + G++V + K GFV+F D + AL G LG + +RLS
Sbjct: 114 EFFVKVYPSCRGGKVVLDQAGISKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVA 173
Query: 347 RSPSNKQAQPDPNQWNAGYYGYA---------QGYENYGYAAAAPQDPSMYYGGYPGYGN 397
+N+ + +Q Y Y+ Y +GY Q+ Y YP YG
Sbjct: 174 IPKANRVKPLEYSQM----YSYSLNQYYQQYQNYYAQWGY----DQNTGSYSYSYPQYGY 225
Query: 398 YQQPQQ 403
Q Q
Sbjct: 226 TQSTMQ 231
>gi|169614620|ref|XP_001800726.1| hypothetical protein SNOG_10456 [Phaeosphaeria nodorum SN15]
gi|160702784|gb|EAT81850.2| hypothetical protein SNOG_10456 [Phaeosphaeria nodorum SN15]
Length = 506
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 127/422 (30%), Positives = 190/422 (45%), Gaps = 61/422 (14%)
Query: 7 GAVPPPPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWA-------TQ 59
G +PPPP A Y Q AP Q PPP +P +++P P AM +
Sbjct: 9 GNLPPPP---GAPGYDGQHGAPQQHMPPPPLAP--VVIPQNTNPIPTAMGSPLPGNPGLD 63
Query: 60 AAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQT 119
A +P + G P++ R L++G L + E L F TG V +VK+I +K
Sbjct: 64 AMSPGSGGPGYVPRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTV 123
Query: 120 GQIE------GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPD 173
YGF+E+ AER + T NG + N E R+NWA ++DT +
Sbjct: 124 SSPSVNSKGFNYGFVEYDDPGAAERGMATLNGRRIHNNE--IRVNWAYQSNNTAKEDTSN 181
Query: 174 H-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
H IFVGDL+ +V D +L + F P ++ A+V+ D TGR++GYGFV F D ++ RA
Sbjct: 182 HFHIFVGDLSNEVNDEVLLQAFSTFGPVSE-ARVMWDMKTGRSRGYGFVAFRDRADAERA 240
Query: 233 MTEMNGVFCSTRPMRIGPATNKKTVSASYQN-------------------SQVAQSDD-- 271
++ M+G + +R +R A K S S Q +Q QS D
Sbjct: 241 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPFGHHHFPTQGVQSYDMV 300
Query: 272 ---DPN-NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEA 327
P TT +VGNL + L LF +G + + + + F++ A A
Sbjct: 301 VAQTPQWQTTCYVGNLTPYTSQSDLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMA 360
Query: 328 LRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSM 387
+ LNG + G+ ++ SWG+ +P Q+ +GY G +A PQ PS
Sbjct: 361 ICQLNGYNVNGRPLKCSWGKD------RPPTGQF--------EGYSPAGPNSAYPQTPSA 406
Query: 388 YY 389
Y+
Sbjct: 407 YF 408
>gi|320165313|gb|EFW42212.1| nucleic acid binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 1042
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 115/176 (65%), Gaps = 7/176 (3%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW GDL+ DE+++++ F GE VV VK+I+N+ TG GY F++F + A RVL
Sbjct: 5 LWFGDLEPSWDESFISSLFGQAGEPVVGVKIIKNRLTGGPAGYCFVDFGNSDRAVRVLHA 64
Query: 143 FNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG +P + + FRLN A + +G R++ P++++FVGDL ADVTD+ L F+ Y S
Sbjct: 65 LNGAQIPGLDPSRRFRLNLALY-SGATRNE-PEYSLFVGDLTADVTDFQLHSFFKQLYAS 122
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKK 255
K AKVV+D+ G KG+GFVRF D ++ LRA+ EMNG V C +PMR+ AT K+
Sbjct: 123 CKTAKVVVDQ-AGTPKGFGFVRFTDSNDCLRALLEMNGAVGCGGKPMRVSAATPKR 177
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 53/77 (68%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRM 330
DD NTTV+VG L V+ E L+ +FS +G +V V+IP GK CGFVQFA AE+A+
Sbjct: 579 DDSINTTVYVGGLSPHVSAEELKAIFSLFGDIVGVRIPQGKACGFVQFAQHGNAEQAIAH 638
Query: 331 LNGTQLGGQNIRLSWGR 347
LNG +GGQ IRLSWG
Sbjct: 639 LNGQYIGGQPIRLSWGH 655
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 24/180 (13%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
++ GDL + + F G K++ +RLTG GY FV FG+ +R +
Sbjct: 5 LWFGDLEPSWDESFISSLFGQAGEPVVGVKIIKNRLTGGPAGYCFVDFGNSDRAVRVLHA 64
Query: 236 MNGV----FCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEH 291
+NG +R R+ N S + +N +P ++FVG+L + VTD
Sbjct: 65 LNGAQIPGLDPSRRFRL----NLALYSGATRN--------EPE-YSLFVGDLTADVTDFQ 111
Query: 292 LRELFSQ-YGQLVHVKIPAG-----KRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
L F Q Y K+ K GFV+F D + AL +NG GG+ +R+S
Sbjct: 112 LHSFFKQLYASCKTAKVVVDQAGTPKGFGFVRFTDSNDCLRALLEMNGAVGCGGKPMRVS 171
>gi|255934068|ref|XP_002558315.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582934|emb|CAP81139.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 496
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 146/293 (49%), Gaps = 30/293 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ-TGQIEGYGFIEFISRAGAERVL 140
R L++G L + E L F TG VV+VK+I +K T + YGF+EF AER +
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFTTKGHNYGFVEFDDPGAAERAM 150
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A +
Sbjct: 151 QTLNGRRIHQSE--IRVNWAYQSNSTSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSA-FG 207
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S A+V+ D TGR++GYGFV F D +E +A+ M+G + +R +R A K S
Sbjct: 208 SVSEARVMWDMKTGRSRGYGFVAFRDRAEADKALNSMDGEWLGSRAIRCNWANQKGQPSI 267
Query: 260 SYQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLRE 294
S Q + VA QS D P TT +VGNL T L
Sbjct: 268 SQQQALVAMGMTPTTPFGHHHFPTHGIQSYDMVAQQTPQWQTTCYVGNLTPYTTQNDLVP 327
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
LF +G ++ ++ A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 328 LFQNFGYVLETRLQADRGFAFVKMDSHENAASAICQLNGYNVNGRPLKCSWGK 380
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 22/192 (11%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDR-LTGRTKGYGFVRFGDESEQLRAMT 234
++VG L VT+ +L++ F K++ D+ T + YGFV F D RAM
Sbjct: 93 LYVGGLDPRVTEDILKQIFETT-GHVVSVKIIPDKNFTTKGHNYGFVEFDDPGAAERAMQ 151
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
+NG +R V+ +YQ++ ++ +D N+ +FVG+L + V DE L +
Sbjct: 152 TLNGRRIHQSEIR---------VNWAYQSNSTSK-EDTSNHFHIFVGDLSNEVNDEVLTQ 201
Query: 295 LFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
FS +G + ++ + G FV F DR+ A++AL ++G LG + IR +W
Sbjct: 202 AFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRAEADKALNSMDGEWLGSRAIRCNW--- 258
Query: 349 PSNKQAQPDPNQ 360
+N++ QP +Q
Sbjct: 259 -ANQKGQPSISQ 269
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 243 TRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 302
T PM G A T + Y V ++ +PN ++VG LD VT++ L+++F G +
Sbjct: 63 TSPMS-GVAMMSPTSAGGY----VRRAAPEPNKRALYVGGLDPRVTEDILKQIFETTGHV 117
Query: 303 VHVKI-------PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 345
V VKI G GFV+F D AE A++ LNG ++ IR++W
Sbjct: 118 VSVKIIPDKNFTTKGHNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNW 167
>gi|198421765|ref|XP_002125303.1| PREDICTED: similar to tRNA selenocysteine-associated protein 1
(SECp43) [Ciona intestinalis]
Length = 324
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 113/176 (64%), Gaps = 6/176 (3%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R+LW+GDL+ +MDET++N F + V+VKVIR K G GY FIEF S A AERVL+
Sbjct: 3 RSLWMGDLEPYMDETFVNKAFLQVSQPVSVKVIRRKDNGLPAGYCFIEFPSEAEAERVLK 62
Query: 142 TFNGTPM--PNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NGT + N + FRLN + AG+ D P +IFVGDL A VTD L++ F RY
Sbjct: 63 LVNGTTINGSNPPKRFRLNRSQ--AGKMWDIGPSFSIFVGDLDATVTDDKLEDFFLKRYR 120
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNK 254
S KGAK++ + G ++GYGFVRF DE+EQ RA+ EM G+ +P+R+ AT K
Sbjct: 121 SVKGAKIMYEE-GGISRGYGFVRFSDEAEQKRALQEMQGIRGLGAKPIRVSVATPK 175
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
++++GDL + + + + F + KV+ + G GY F+ F E+E R +
Sbjct: 3 RSLWMGDLEPYMDETFVNKAF-LQVSQPVSVKVIRRKDNGLPAGYCFIEFPSEAEAERVL 61
Query: 234 TEMNG--VFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEH 291
+NG + S P R SQ + D + ++FVG+LD+ VTD+
Sbjct: 62 KLVNGTTINGSNPPKRF-----------RLNRSQAGKMWDIGPSFSIFVGDLDATVTDDK 110
Query: 292 LRELF-SQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQ-LGGQNIRLS 344
L + F +Y + KI + GFV+F+D + + AL+ + G + LG + IR+S
Sbjct: 111 LEDFFLKRYRSVKGAKIMYEEGGISRGYGFVRFSDEAEQKRALQEMQGIRGLGAKPIRVS 170
Query: 345 WGRSPSNKQA 354
+P K A
Sbjct: 171 VA-TPKGKMA 179
>gi|425768240|gb|EKV06770.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum Pd1]
gi|425770410|gb|EKV08883.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum PHI26]
Length = 482
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 146/295 (49%), Gaps = 32/295 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ---TGQIEGYGFIEFISRAGAER 138
R L++G L + E L F TG VV+VK+I +K T + YGF+EF AER
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNGQFTTKGHNYGFVEFDDPGAAER 150
Query: 139 VLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRAR 197
+QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A
Sbjct: 151 AMQTLNGRRIHQSE--IRVNWAYQSNSTSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSA- 207
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ S A+V+ D TGR++GYGFV F D +E +A+ M+G + +R +R A K
Sbjct: 208 FGSVSEARVMWDMKTGRSRGYGFVAFRDRTEADKALNSMDGEWLGSRAIRCNWANQKGQP 267
Query: 258 SASYQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHL 292
S S Q + VA QS D P TT +VGNL T L
Sbjct: 268 SISQQQALVAMGMTPTTAFGHHHFPTHGIQSYDMVAQQTPQWQTTCYVGNLTPYTTQNDL 327
Query: 293 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
LF +G ++ ++ A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 328 VPLFQNFGYVLETRLQADRGFAFVKMDSHENAASAICQLNGYNVNGRPLKCSWGK 382
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 24/194 (12%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDR---LTGRTKGYGFVRFGDESEQLRA 232
++VG L VT+ +L++ F K++ D+ T + YGFV F D RA
Sbjct: 93 LYVGGLDPRVTEDILKQIFETT-GHVVSVKIIPDKNGQFTTKGHNYGFVEFDDPGAAERA 151
Query: 233 MTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 292
M +NG +R V+ +YQ++ ++ +D N+ +FVG+L + V DE L
Sbjct: 152 MQTLNGRRIHQSEIR---------VNWAYQSNSTSK-EDTSNHFHIFVGDLSNEVNDEVL 201
Query: 293 RELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 346
+ FS +G + ++ + G FV F DR+ A++AL ++G LG + IR +W
Sbjct: 202 TQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRTEADKALNSMDGEWLGSRAIRCNW- 260
Query: 347 RSPSNKQAQPDPNQ 360
+N++ QP +Q
Sbjct: 261 ---ANQKGQPSISQ 271
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 266 VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---------PAGKRCGFV 316
V ++ +PN ++VG LD VT++ L+++F G +V VKI G GFV
Sbjct: 81 VRRAAPEPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNGQFTTKGHNYGFV 140
Query: 317 QFADRSCAEEALRMLNGTQLGGQNIRLSW 345
+F D AE A++ LNG ++ IR++W
Sbjct: 141 EFDDPGAAERAMQTLNGRRIHQSEIRVNW 169
>gi|169768824|ref|XP_001818882.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus oryzae RIB40]
gi|238498168|ref|XP_002380319.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|83766740|dbj|BAE56880.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693593|gb|EED49938.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|391874569|gb|EIT83434.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 477
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 146/294 (49%), Gaps = 31/294 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERV 139
R L++G L + E L F TG VV+VK+I +NK + YGF+EF AER
Sbjct: 90 RALYVGGLDQRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERA 149
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + E R+NWA ++DT +H IFVGDL+ +V D +LQ+ F A +
Sbjct: 150 MQTLNGRRIHQSE--IRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEILQQAFSA-F 206
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S A+V+ D TGR++GYGFV F D ++ +A+ M+G + +R +R A K S
Sbjct: 207 GSVSEARVMWDMKTGRSRGYGFVAFRDRADADKALGSMDGEWLGSRAIRCNWANQKGQPS 266
Query: 259 ASYQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLR 293
S Q + A QS D P TT +VGNL T L
Sbjct: 267 ISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLV 326
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
LF +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 327 PLFQNFGYVLETRLQADRGFAFIKMDSHENAAMAICQLNGYNVNGRPLKCSWGK 380
>gi|407927556|gb|EKG20446.1| hypothetical protein MPH_02256 [Macrophomina phaseolina MS6]
Length = 485
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 179/383 (46%), Gaps = 51/383 (13%)
Query: 5 APGAVPPPPPPMAAHQ-YQYQQQAPPQ----QQPPPQPSPYMMMMPPQPQAQPPAMWATQ 59
A GA PPPP AA Q Y Q PQ PPP +P ++ PQ P T
Sbjct: 6 ASGANLPPPPASAAGQGYDNGGQGNPQASQGHMPPPPLAPVII-----PQNTNPI--PTA 58
Query: 60 AAAPQAAGVAVPPQQQG-------QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
++P + V P G +P + R L++G L + E L F G VV+VK
Sbjct: 59 ISSPMSGSVMSPTSAGGYVRRAAPEPNK-RALYVGGLDPRITEDVLRQIFETAGHVVSVK 117
Query: 113 VIRNKQTGQIEG--YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDD 170
+I +K Q +G YGF+E+ AER +QT NG + E R+NWA + ++D
Sbjct: 118 IIPDKNKFQSKGLNYGFVEYDDPGTAERAMQTLNGRRVHQSE--IRVNWAYQSNNQPKED 175
Query: 171 TPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
T +H IFVGDL+ +V D +L + F A + A+V+ D TGR++GYGFV F D +
Sbjct: 176 TSNHFHIFVGDLSNEVNDEVLLQAFSA-FGQVSEARVMWDMKTGRSRGYGFVAFRDRGDA 234
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVA-------------------QSD 270
+A++ M+G + +R +R A K S S Q + + QS
Sbjct: 235 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPYGHHHFPTHGVQSY 294
Query: 271 DDPNN------TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 324
+ N TT +VGNL T L LF +G +V + + + F++ A
Sbjct: 295 EMVVNQTPQWQTTCYVGNLTPYTTQSDLVPLFQNFGYVVETRFQSDRGFAFIKMDTHENA 354
Query: 325 EEALRMLNGTQLGGQNIRLSWGR 347
A+ LNG + G+ ++ SWG+
Sbjct: 355 AMAICQLNGYNVNGRPLKCSWGK 377
>gi|410924257|ref|XP_003975598.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Takifugu rubripes]
Length = 340
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 117/186 (62%), Gaps = 7/186 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL +M+E ++ F+ GE VK+I +K TG GY F+E A ER +Q
Sbjct: 7 SLWMGDLDPYMEEDFIKQAFSAMGESPTGVKIITHKITGGSAGYCFVELADEASVERCVQ 66
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG +P + F+LN+A++G ++ + P+ ++FVGDLA+DV D+ LQ+ F+ YP
Sbjct: 67 RLNGKLVPGSNPPRKFKLNYATYG--KRPEAGPEFSVFVGDLASDVQDFQLQQVFK-NYP 123
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S KGAKVV D+ G ++GYGFV+FG+ESEQ +A+ E G S +P+R+ A K +
Sbjct: 124 SCKGAKVVTDQY-GYSRGYGFVKFGEESEQKKAIEECQGTMLSGKPLRLSVAVAKSQKIS 182
Query: 260 SYQNSQ 265
SYQ Q
Sbjct: 183 SYQGGQ 188
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 103/233 (44%), Gaps = 24/233 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + +++ F A S G K++ ++TG + GY FV DE+ R +
Sbjct: 7 SLWMGDLDPYMEEDFIKQAFSAMGESPTGVKIITHKITGGSAGYCFVELADEASVERCVQ 66
Query: 235 EMNGVFCST----RPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDE 290
+NG R ++ AT K A + S VFVG+L S V D
Sbjct: 67 RLNGKLVPGSNPPRKFKLNYATYGKRPEAGPEFS-------------VFVGDLASDVQDF 113
Query: 291 HLRELFSQY-----GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 345
L+++F Y ++V + + GFV+F + S ++A+ GT L G+ +RLS
Sbjct: 114 QLQQVFKNYPSCKGAKVVTDQYGYSRGYGFVKFGEESEQKKAIEECQGTMLSGKPLRLSV 173
Query: 346 GRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNY 398
+ S K + Q Y Y Q NY Y + YY + GY Y
Sbjct: 174 AVAKSQKISSYQGGQ-GQNYSSYNQSQSNY-YGSNNSVAQGGYYSQWGGYDQY 224
>gi|336373915|gb|EGO02253.1| hypothetical protein SERLA73DRAFT_86524 [Serpula lacrymans var.
lacrymans S7.3]
Length = 611
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 149/298 (50%), Gaps = 78/298 (26%)
Query: 124 GYGFIEFISRAGAERVLQTF--NGT----PMPNGEQNFRLNWASFGAGEKRDDTP----- 172
GY F+ F S + A+ VL NG+ MPN + F LNWAS +TP
Sbjct: 39 GYCFLTFPSPSLAQSVLAQVANNGSGQPVTMPNSSKPFVLNWAS-----SVPNTPIAQQQ 93
Query: 173 ---DHTIFVGDLAADVTDYMLQETFRA--------RYP-------STKGAKVVIDRLTGR 214
+++IFVGDLA + ++ L FR R P S K AK+++D +TG
Sbjct: 94 YPREYSIFVGDLAPETSNSDLVAVFRNPVLGLRNDREPKFIRPFLSCKSAKIMLDPVTGV 153
Query: 215 TKGYGFVRFGDESEQLRAMTEMNGVFCSTRP-----------MRIGPATNK--------- 254
++GYGFVRF +E++Q RA+ EM+G++C +RP +++G T
Sbjct: 154 SRGYGFVRFTEEADQQRALIEMHGLYCLSRPTAQQYSSTNAAIKVGGVTTNPAGATFAPD 213
Query: 255 ----------KTVSASYQNSQVAQ--------------SDDDPNNTTVFVGNLDSIVTDE 290
S+++ A+ + DP NTTVFVG L ++++E
Sbjct: 214 GQDQNGAPRYMISEESWKHHAQARAILGNLIGPNGEQLTSTDPYNTTVFVGGLSPLISEE 273
Query: 291 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
LR F+ +G + +VK+P GK CGFVQF ++ AE A+ + G +GG IRLSWGRS
Sbjct: 274 TLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKMQGFPIGGSRIRLSWGRS 331
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA G++ VKV K G F++F+ +A AER ++
Sbjct: 260 TVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCG------FVQFVRKADAERAIEK 313
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 314 MQGFPI--GGSRIRLSW 328
>gi|388579312|gb|EIM19637.1| hypothetical protein WALSEDRAFT_33897 [Wallemia sebi CBS 633.66]
Length = 423
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 151/281 (53%), Gaps = 22/281 (7%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V +VK+I RN G + YGF+E+ AE LQ
Sbjct: 17 LYVGNLSPRVTEYMLTEIFAVAGHVQSVKIIPDRNFSHGGLN-YGFVEYTDMRAAETALQ 75
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G ++ D T +FVGDL+ +V D +L + F + S
Sbjct: 76 TLNGRKIFDTE--IRVNWAYQGNNKQEDTTNHFHVFVGDLSPEVNDEILSKAFSG-FKSI 132
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+V+ D TG+++GYGF+ F ++++ +A++ MNG + +R +R+ A N+KT + S+
Sbjct: 133 SDARVMWDMNTGKSRGYGFLSFREKTDAEQAISTMNGEWLGSRAIRVNWA-NQKTQTGSH 191
Query: 262 QNSQVAQSDDDPN---------------NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 306
+ + + + + N NTTV++GNL T L +F +G ++ V+
Sbjct: 192 RLNDLMPTMNAFNGPLSYEAVFQQTPAYNTTVYIGNLTPYTTQADLVPIFQAFGYIIEVR 251
Query: 307 IPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
+ A + FV+ A A+ L GT + G+ I+ SWGR
Sbjct: 252 MQADRGFAFVKLDSHENASMAIVQLQGTLIQGRPIKCSWGR 292
>gi|326932968|ref|XP_003212582.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Meleagris gallopavo]
Length = 307
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 114/170 (67%), Gaps = 7/170 (4%)
Query: 89 LQYWMDETYLNTCFAHTGEVV-AVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTP 147
L+ +MDE +++ FA GE+V +VK+IRN+ TG GY F+EF A AE+ L NG P
Sbjct: 30 LEPYMDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKP 89
Query: 148 MPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAK 205
+P + F+LN+A++G ++ D++P++++FVGDL ADV D ML E F YPS +G K
Sbjct: 90 LPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTADVDDGMLYEFFVKVYPSCRGGK 147
Query: 206 VVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
VV+D+ G +KGYGFV+F DE EQ RA+TE G V ++PMR+ A K
Sbjct: 148 VVLDQ-AGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPMRLSVAIPK 196
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 190 LQETFRARYPSTKG-----AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+ E F +R +T G K++ +RLTG GY FV F D + + + ++NG +
Sbjct: 34 MDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKING-----K 88
Query: 245 PM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQY---- 299
P+ PA K A+Y Q D+ P ++FVG+L + V D L E F +
Sbjct: 89 PLPGATPAKRFKLNYATYGK----QPDNSP-EYSLFVGDLTADVDDGMLYEFFVKVYPSC 143
Query: 300 --GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPSNK 352
G++V + K GFV+F D + AL G LG + +RLS N+
Sbjct: 144 RGGKVVLDQAGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPMRLSVAIPKVNR 199
>gi|190344618|gb|EDK36327.2| hypothetical protein PGUG_00425 [Meyerozyma guilliermondii ATCC
6260]
Length = 450
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 162/296 (54%), Gaps = 28/296 (9%)
Query: 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRN-KQTGQIEGYGFIEFISRA 134
+P +W+GDL +E + ++ GE V++K++++ ++ G GY F+ F + A
Sbjct: 78 KPRNENQVWMGDLDPRWNEQAIADIWSQIGESPVSIKIMKDGREPGG--GYCFVSF-ANA 134
Query: 135 GAERVLQTFNGTPMPNGEQNFRLNWASFGAGE----KRDDTP--DHTIFVGDLAADVTDY 188
A + T+NG+P+PN ++F+LN AS G +R+ P D +IFVGDLA DV++
Sbjct: 135 NAVQTALTYNGSPIPNSSKHFKLNIASRGKNTATDIQRNSKPANDFSIFVGDLAMDVSEP 194
Query: 189 MLQETFRARYPS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
+L E F + +P K K+++D T +KG+GFVRF D + Q +A+TE NG+ +R +R
Sbjct: 195 ILYEAFNSLFPDQVKQVKIMMDNSTRASKGFGFVRFFDANTQAKALTEANGMVVGSRAIR 254
Query: 248 IGPA--TNK-KTVSASYQNSQVAQ-------------SDDDPNNTTVFVGNLDSIVTDEH 291
+G A +NK + V+ + ++A DP N T+ V L VT+E
Sbjct: 255 VGMAAGSNKPQPVTNIVHSDRLASPAIEEEVKLPKHARFSDPTNNTIVVHGLSGKVTEEE 314
Query: 292 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
L S +G++++ + + G+V+F +R AE A+ + G + I++SWG
Sbjct: 315 LALHLSSFGEILYCTLSSDFDSGYVKFYNRQDAETAIFFMYGQIINDCRIQVSWGH 370
>gi|146422214|ref|XP_001487048.1| hypothetical protein PGUG_00425 [Meyerozyma guilliermondii ATCC
6260]
Length = 450
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 162/296 (54%), Gaps = 28/296 (9%)
Query: 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRN-KQTGQIEGYGFIEFISRA 134
+P +W+GDL +E + ++ GE V++K++++ ++ G GY F+ F + A
Sbjct: 78 KPRNENQVWMGDLDPRWNEQAIADIWSQIGESPVSIKIMKDGREPGG--GYCFVSF-ANA 134
Query: 135 GAERVLQTFNGTPMPNGEQNFRLNWASFGAGE----KRDDTP--DHTIFVGDLAADVTDY 188
A + T+NG+P+PN ++F+LN AS G +R+ P D +IFVGDLA DV++
Sbjct: 135 NAVQTALTYNGSPIPNSSKHFKLNIASRGKNTATDIQRNSKPANDFSIFVGDLAMDVSEP 194
Query: 189 MLQETFRARYPS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
+L E F + +P K K+++D T +KG+GFVRF D + Q +A+TE NG+ +R +R
Sbjct: 195 ILYEAFNSLFPDQVKQVKIMMDNSTRASKGFGFVRFFDANTQAKALTEANGMVVGSRAIR 254
Query: 248 IGPA--TNK-KTVSASYQNSQVAQ-------------SDDDPNNTTVFVGNLDSIVTDEH 291
+G A +NK + V+ + ++A DP N T+ V L VT+E
Sbjct: 255 VGMAAGSNKPQPVTNIVHSDRLASPAIEEEVKLPKHARFSDPTNNTIVVHGLSGKVTEEE 314
Query: 292 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
L S +G++++ + + G+V+F +R AE A+ + G + I++SWG
Sbjct: 315 LALHLSSFGEILYCTLSSDFDSGYVKFYNRQDAETAIFFMYGQIINDCRIQVSWGH 370
>gi|440635298|gb|ELR05217.1| hypothetical protein GMDG_01655 [Geomyces destructans 20631-21]
Length = 503
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/344 (32%), Positives = 161/344 (46%), Gaps = 44/344 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG--YGFIEFISRAGAERV 139
R L++G L + E L F TG V VK+I +K G +G YGF+E+ AER
Sbjct: 89 RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGASKGFNYGFVEYDDPGAAERA 148
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A +
Sbjct: 149 MQTLNGRRVHQAE--IRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFCA-F 205
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S A+V+ D TGR++GYGFV F + + +A++ M+G + +R +R A K S
Sbjct: 206 GSVSEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQPS 265
Query: 259 ASYQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLR 293
S Q S V+ QS D P TTV+VGNL T L
Sbjct: 266 ISQQQSMVSTGLTPTTPFGHHHFPTHGVQSYDMIVQQTPQWQTTVYVGNLTPYTTQNDLV 325
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
LF +G +V + + + FV+ A A+ L+G + G+ ++ SWG+ + Q
Sbjct: 326 PLFQNFGYVVETRFQSDRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDKAPSQ 385
Query: 354 AQPDPNQWNAGYYGYAQGYE-NYGYAAAAPQDPSMY---YGGYP 393
G+ G GY A P PS Y YGG P
Sbjct: 386 ---------PGFEGTPTGYSPQSAQTPAYPGTPSAYFPQYGGMP 420
>gi|317030432|ref|XP_001392545.2| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus niger CBS 513.88]
Length = 478
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 146/294 (49%), Gaps = 31/294 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERV 139
R L++G L + E L F TG VV+VK+I +NK + YGF+EF AER
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERA 150
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A +
Sbjct: 151 MQTLNGRRIHQSE--IRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 207
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S A+V+ D TGR++GYGFV F + S+ +A++ M+G + +R +R A K S
Sbjct: 208 GSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQKGQPS 267
Query: 259 ASYQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLR 293
S Q + A QS D P TT +VGNL T L
Sbjct: 268 ISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQTDLV 327
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
LF +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 328 PLFQNFGYVIETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 381
>gi|358371808|dbj|GAA88414.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus kawachii IFO 4308]
Length = 478
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 146/294 (49%), Gaps = 31/294 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERV 139
R L++G L + E L F TG VV+VK+I +NK + YGF+EF AER
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERA 150
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A +
Sbjct: 151 MQTLNGRRIHQSE--IRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 207
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S A+V+ D TGR++GYGFV F + S+ +A++ M+G + +R +R A K S
Sbjct: 208 GSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQKGQPS 267
Query: 259 ASYQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLR 293
S Q + A QS D P TT +VGNL T L
Sbjct: 268 ISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQTDLV 327
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
LF +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 328 PLFQNFGYVIETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 381
>gi|384247365|gb|EIE20852.1| hypothetical protein COCSUDRAFT_4708, partial [Coccomyxa
subellipsoidea C-169]
Length = 264
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 144/267 (53%), Gaps = 8/267 (2%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+ L++G+L +++E L F+ G V V++++++ TG G F++F A L+
Sbjct: 5 KALYVGNLHPYVNEAVLQDIFSTLGTVSEVRIVKDRATGNSAGSAFVKFEDHQAAAIALK 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETFRARYPS 200
T NG + N E R+ WA EK ++T H+ IFVG+L+ DV D +L + F+
Sbjct: 65 TINGRILYNKE--VRIQWAF--QKEKTENTASHSHIFVGNLSGDVADPVLLQAFQ-HLGE 119
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D TGR+KG+GFV F + +A+ EM+G +R G A +K
Sbjct: 120 CSDARVMWDHSTGRSKGFGFVSFRTKEAAEKALAEMDGAQVGQWKIRCGWAHHKTEAVTG 179
Query: 261 YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFAD 320
V ++ DP NT V+VGNL + V +E LR F YG++ +K GFV + D
Sbjct: 180 LDIDTVDRA--DPANTNVYVGNLPTEVMEEDLRAAFGAYGEITGLKPCHKGGYGFVTYRD 237
Query: 321 RSCAEEALRMLNGTQLGGQNIRLSWGR 347
S A +A+ +NG +L G+ ++ SWGR
Sbjct: 238 HSAAVQAIVGMNGKELKGKMVKCSWGR 264
>gi|224081280|ref|XP_002188811.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Taeniopygia
guttata]
Length = 281
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 116/173 (67%), Gaps = 7/173 (4%)
Query: 86 IGDLQYWMDETYLNTCFAHTGEVV-AVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
+G+L+ +MDE +++ FA GE+V +VK+IRN+ TG GY F+EF A AE+ L N
Sbjct: 1 MGELEPYMDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKIN 60
Query: 145 GTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
G P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YPS +
Sbjct: 61 GKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCR 118
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
G KVV+D+ G +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K
Sbjct: 119 GGKVVLDQ-AGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 170
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 190 LQETFRARYPSTKG-----AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+ E F +R +T G K++ +RLTG GY FV F D + + + ++NG +
Sbjct: 8 MDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKING-----K 62
Query: 245 PM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQY---- 299
P+ PA K A+Y Q D+ P ++FVG+L V D L E F +
Sbjct: 63 PLPGATPAKRFKLNYATYGK----QPDNSP-EYSLFVGDLTPDVDDGMLYEFFVKVYPSC 117
Query: 300 --GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPSNK 352
G++V + K GFV+F D + AL G LG + +RLS +N+
Sbjct: 118 RGGKVVLDQAGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKANR 173
>gi|260829407|ref|XP_002609653.1| hypothetical protein BRAFLDRAFT_123569 [Branchiostoma floridae]
gi|229295015|gb|EEN65663.1| hypothetical protein BRAFLDRAFT_123569 [Branchiostoma floridae]
Length = 297
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 116/176 (65%), Gaps = 7/176 (3%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +LW+GDL+ +MDE ++ FA GE +++VK+I+N+QTG G+ F++F + AER
Sbjct: 1 MTSLWMGDLEPYMDEPFIMNAFASMGEPIISVKLIKNRQTGGPAGFCFVDFGDQQLAERA 60
Query: 140 LQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
L +G +P + F+LN+AS+G + TP+++IFVGDL ++ D LQE F R
Sbjct: 61 LTRLSGKQLPGSYTPKRFKLNYASYG--RENVVTPEYSIFVGDLTPEIDDGSLQEFFGRR 118
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPAT 252
Y S K AKVV+D G ++GYGFVRF DE+EQ RA+TEM G V + +R+ PAT
Sbjct: 119 YSSCKAAKVVLD-AAGNSRGYGFVRFTDENEQKRALTEMQGAVGLGGKALRVSPAT 173
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 20/179 (11%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + F + K++ +R TG G+ FV FGD+ RA+T
Sbjct: 3 SLWMGDLEPYMDEPFIMNAFASMGEPIISVKLIKNRQTGGPAGFCFVDFGDQQLAERALT 62
Query: 235 EMNG--VFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 292
++G + S P R K ASY V + ++FVG+L + D L
Sbjct: 63 RLSGKQLPGSYTPKRF------KLNYASYGRENVVTPE-----YSIFVGDLTPEIDDGSL 111
Query: 293 RELFS-QYGQLVHVKI---PAG--KRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
+E F +Y K+ AG + GFV+F D + + AL + G LGG+ +R+S
Sbjct: 112 QEFFGRRYSSCKAAKVVLDAAGNSRGYGFVRFTDENEQKRALTEMQGAVGLGGKALRVS 170
>gi|254572874|ref|XP_002493546.1| RNA binding protein, component of the U1 snRNP protein
[Komagataella pastoris GS115]
gi|238033345|emb|CAY71367.1| RNA binding protein, component of the U1 snRNP protein
[Komagataella pastoris GS115]
gi|328354629|emb|CCA41026.1| Protein NAM8 [Komagataella pastoris CBS 7435]
Length = 378
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 155/321 (48%), Gaps = 56/321 (17%)
Query: 84 LWIGDLQ-YWMDET----YLNTCFAHTGEVVAVKVIRNK-----QTGQIEGYGFIEFISR 133
+W+GDL W ++T +L+ + + ++ +++VI++K + GY F+ F
Sbjct: 22 VWMGDLLPSWEEDTIRQIWLSVDPSLSEKIHSIRVIKDKTPNLAKLNNNPGYCFLRFTDY 81
Query: 134 AGAERVLQTFNGTPMPN-GEQNFRLNWAS------------FGAGEKRDDTPDHTIFVGD 180
A ++ + G P+PN ++ F+LNWAS + + T +++IFVGD
Sbjct: 82 DTANELITNYQGKPIPNHKDKFFKLNWASSHTQNQQQQQGYQNTQDSSNRTQENSIFVGD 141
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
LA VTD ML + F+ YPS A+++ID TG+T+G+GFV+F D E +A+ EM G
Sbjct: 142 LAQGVTDTMLLDAFKKNYPSAFSARIMIDSQTGKTRGFGFVKFRDIQELNKALIEMQGFV 201
Query: 241 CSTRPMRIGPATNKKTVSASYQNSQVAQ-------------------------------- 268
+ RP+R+ A + + Q Q Q
Sbjct: 202 LNGRPIRVSTAGRSTSNTNGGQLKQSVQQSSTAPSSSGSQSYGFGNRLVIPPLPLAPPLN 261
Query: 269 SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEAL 328
DPNNT + V N+D + + L E F +G++V K K V +ADR AE A+
Sbjct: 262 PASDPNNTALSVTNIDELTEQKELWEYFQPFGKIVLFK-QTSKESAIVVYADRLGAELAV 320
Query: 329 RMLNGTQLGGQNIRLSWGRSP 349
R +NG Q+G I + WG SP
Sbjct: 321 REMNGCQVGFSRIVVKWGESP 341
>gi|164424152|ref|XP_962723.2| hypothetical protein NCU07874 [Neurospora crassa OR74A]
gi|157070397|gb|EAA33487.2| hypothetical protein NCU07874 [Neurospora crassa OR74A]
Length = 480
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 132/443 (29%), Positives = 192/443 (43%), Gaps = 65/443 (14%)
Query: 4 PAPGAVPPPPPPMAA---HQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQA 60
P G +PPPP P A ++ A PPP + +P P A+ +
Sbjct: 8 PTTGQLPPPPQPNAGAPGYENGQNNNANSAHMPPPP-----LHIPQNTNPIPTAITSPMG 62
Query: 61 AAPQAAGVAVPPQQQGQPG--------EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
+G+ + P G P R L++G L + E L F TG V VK
Sbjct: 63 GNGDTSGI-MSPTSAGNPFGRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQNVK 121
Query: 113 VIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTP 172
+I +K + YGF+E+ AER +QT NG + E R+NWA + ++DT
Sbjct: 122 IIPDKNQ-KGYNYGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNNQNKEDTS 178
Query: 173 DH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
H IFVGDL+ +V D +L + F A + S A+V+ D TGR++GYGFV F D + +
Sbjct: 179 GHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEK 237
Query: 232 AMTEMNGVFCSTRPMRIGPATNKK---------------TVSASYQNSQ----------- 265
A++ M+G + +R +R A K T + Y +
Sbjct: 238 ALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHGVHSYDM 297
Query: 266 -VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 324
VAQ+ TT +VGNL T L LF +G +V + A + F++ A
Sbjct: 298 IVAQTPAW--QTTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQADRGFAFIKMDTHENA 355
Query: 325 EEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQD 384
A+ LNG Q+ G+ ++ SWG+ + Q DPNQ + GY P
Sbjct: 356 AMAICQLNGYQVNGRPLKCSWGKDKTPNPQQFDPNQPYSPQSAQTPGY---------PGT 406
Query: 385 PSMYYGG----YPG-YGNYQQPQ 402
PS Y+ YPG GNY PQ
Sbjct: 407 PSTYFNNYGNSYPGQQGNYNGPQ 429
>gi|115473341|ref|NP_001060269.1| Os07g0615400 [Oryza sativa Japonica Group]
gi|23237933|dbj|BAC16506.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|113611805|dbj|BAF22183.1| Os07g0615400 [Oryza sativa Japonica Group]
gi|215737207|dbj|BAG96136.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767365|dbj|BAG99593.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637457|gb|EEE67589.1| hypothetical protein OsJ_25126 [Oryza sativa Japonica Group]
Length = 427
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 153/290 (52%), Gaps = 29/290 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + E L F TG V K+IR +++ YGF+++ R A +
Sbjct: 65 RSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKSS----YGFVDYYDRRSAALSIL 120
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + Q R+NWA + +G++ D T IFVGDL+ +VTD L F Y S
Sbjct: 121 TLNGKQIFG--QLIRVNWA-YASGQREDTTDHFNIFVGDLSPEVTDSALFAFFSG-YSSC 176
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT--------- 252
A+V+ D+ TGR++GYGFV F ++ + A+ ++NG + +R +R AT
Sbjct: 177 SDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGSRQIRCNWATKGASNGEQQ 236
Query: 253 --NKKTVSASYQN----SQVAQSDDDPNNT----TVFVGNLDSIVTDEHLRELFSQY--G 300
+ K V+ N + ++D P N TV+VGNL VT + L LF G
Sbjct: 237 TSDSKNVADLTNNLTEDGKEKANEDAPENNPQYRTVYVGNLAHEVTQDVLHRLFHALGAG 296
Query: 301 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
+ V+I GK GFV++++ + A A++M NG LGG+ I+ SWG P+
Sbjct: 297 AIEEVRIQLGKGFGFVRYSNHAEAALAIQMGNGRILGGKPIKCSWGNKPT 346
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 24/199 (12%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VT+ +L+E F++ +G K++ YGFV + D
Sbjct: 60 DTSTCRSVYVGNVHVQVTEALLREVFQST-GLVEGCKLI----RKEKSSYGFVDYYDRRS 114
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
++ +NG + +R+ A Q +D ++ +FVG+L VT
Sbjct: 115 AALSILTLNGKQIFGQLIRVNWAYAS------------GQREDTTDHFNIFVGDLSPEVT 162
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ ++ G FV F ++ A+ A+ LNG LG + IR
Sbjct: 163 DSALFAFFSGYSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGSRQIR 222
Query: 343 LSWG-RSPSNKQAQPDPNQ 360
+W + SN + Q ++
Sbjct: 223 CNWATKGASNGEQQTSDSK 241
>gi|134077058|emb|CAK39931.1| unnamed protein product [Aspergillus niger]
Length = 497
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 146/294 (49%), Gaps = 31/294 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERV 139
R L++G L + E L F TG VV+VK+I +NK + YGF+EF AER
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERA 150
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A +
Sbjct: 151 MQTLNGRRIHQSE--IRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 207
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S A+V+ D TGR++GYGFV F + S+ +A++ M+G + +R +R A K S
Sbjct: 208 GSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQKGQPS 267
Query: 259 ASYQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLR 293
S Q + A QS D P TT +VGNL T L
Sbjct: 268 ISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQTDLV 327
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
LF +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 328 PLFQNFGYVIETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 381
>gi|344245053|gb|EGW01157.1| tRNA selenocysteine 1-associated protein 1 [Cricetulus griseus]
Length = 283
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 119/182 (65%), Gaps = 7/182 (3%)
Query: 89 LQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTP 147
L+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L NG P
Sbjct: 6 LEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKP 65
Query: 148 MPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAK 205
+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YPS +G K
Sbjct: 66 LPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGK 123
Query: 206 VVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKTVSASYQNS 264
VV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K + + S
Sbjct: 124 VVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASRVKPVEYS 182
Query: 265 QV 266
Q+
Sbjct: 183 QM 184
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 190 LQETFRARYPSTKG-----AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+ E F +R +T G K++ +RLTG GY FV F D + + + ++NG +
Sbjct: 10 MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKING-----K 64
Query: 245 PM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQY---- 299
P+ PA K A+Y Q D+ P ++FVG+L V D L E F +
Sbjct: 65 PLPGATPAKRFKLNYATYGK----QPDNSP-EYSLFVGDLTPDVDDGMLYEFFVKVYPSC 119
Query: 300 --GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
G++V + K GFV+F D + AL G LG + +RLS
Sbjct: 120 RGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLS 167
>gi|115491713|ref|XP_001210484.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
gi|114197344|gb|EAU39044.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
Length = 478
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 146/294 (49%), Gaps = 31/294 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERV 139
R L++G L + E L F TG VV+VK+I +NK + YGF+EF AER
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERA 150
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A +
Sbjct: 151 MQTLNGRRIHQSE--IRVNWAYQSNNTNKEDTSNHFHIFVGDLSNEVNDEILLQAFSA-F 207
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S A+V+ D TGR++GYGFV F + S+ +A++ M+G + +R +R A K S
Sbjct: 208 GSVSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQPS 267
Query: 259 ASYQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLR 293
S Q + A QS D P TT +VGNL + L
Sbjct: 268 ISQQQAMAAMGMTPTTPFGHHHFPTHGMQSYDMVVQQTPQWQTTCYVGNLTPYTSQNDLV 327
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
LF +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 328 PLFQNFGFVLETRLQADRGFAFIKMDSHENAAMAICQLNGYNVNGRPLKCSWGK 381
>gi|350291093|gb|EGZ72307.1| hypothetical protein NEUTE2DRAFT_144798 [Neurospora tetrasperma
FGSC 2509]
Length = 490
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 193/452 (42%), Gaps = 73/452 (16%)
Query: 4 PAPGAVPPPPPPMAA---HQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQA 60
P G +PPPP P A ++ A PPP + +P P A+ +
Sbjct: 8 PTTGQLPPPPQPNAGAPGYENGQNNNANSAHMPPPP-----LHIPQNTNPIPTAITSPMG 62
Query: 61 AAPQAAGVAVPPQQQGQP--------GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
+G+ + P G P R L++G L + E L F TG V VK
Sbjct: 63 GNGDTSGI-MSPTSAGNPFGRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQNVK 121
Query: 113 VIRNKQTGQIEG---------YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG 163
+I +K G+ YGF+E+ AER +QT NG + E R+NWA
Sbjct: 122 IIPDKNVGKPGSEQPRQKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQS 179
Query: 164 AGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVR 222
+ ++DT H IFVGDL+ +V D +L + F A + S A+V+ D TGR++GYGFV
Sbjct: 180 NNQNKEDTSGHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVA 238
Query: 223 FGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK---------------TVSASYQNSQ-- 265
F D + +A++ M+G + +R +R A K T + Y +
Sbjct: 239 FRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGLTPTTPYGHHHFP 298
Query: 266 ----------VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGF 315
VAQ+ TT +VGNL T L LF +G +V + A + F
Sbjct: 299 THGVHSYDMIVAQTPAW--QTTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQADRGFAF 356
Query: 316 VQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENY 375
++ A A+ LNG Q+ G+ ++ SWG+ + Q DPNQ + GY
Sbjct: 357 IKMDTHENAAMAICQLNGYQVNGRPLKCSWGKDKTPNPQQFDPNQPYSPQSAQTPGY--- 413
Query: 376 GYAAAAPQDPSMYY----GGYPG-YGNYQQPQ 402
P PS Y+ YPG GNY PQ
Sbjct: 414 ------PGTPSTYFNNYGNSYPGQQGNYNGPQ 439
>gi|218200015|gb|EEC82442.1| hypothetical protein OsI_26865 [Oryza sativa Indica Group]
Length = 427
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 152/290 (52%), Gaps = 29/290 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + E L F TG V K+IR +++ YGF+++ R A +
Sbjct: 65 RSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKSS----YGFVDYYDRRSAALAIL 120
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + Q R+NWA + +G++ D T IFVGDL+ +VTD L F Y S
Sbjct: 121 TLNGKQIFG--QLIRVNWA-YASGQREDTTDHFNIFVGDLSPEVTDSALFAFFSG-YSSC 176
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT--------- 252
A+V+ D+ TGR++GYGFV F ++ + A+ ++NG + +R +R AT
Sbjct: 177 SDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGSRQIRCNWATKGASNGEQQ 236
Query: 253 --NKKTVSASYQN----SQVAQSDDDPNNT----TVFVGNLDSIVTDEHLRELFSQY--G 300
+ K V+ N + ++D P N TV+VGNL VT + L LF G
Sbjct: 237 TSDSKNVADLTNNLTEDGKEKANEDVPENNPQYRTVYVGNLAHEVTQDVLHRLFHALGAG 296
Query: 301 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
+ V+I GK GFV+++ + A A++M NG LGG+ I+ SWG P+
Sbjct: 297 AIEEVRIQLGKGFGFVRYSSHTEAALAIQMGNGRILGGKPIKCSWGNKPT 346
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 24/199 (12%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VT+ +L+E F++ +G K++ YGFV + D
Sbjct: 60 DTSTCRSVYVGNVHVQVTEALLREVFQST-GLVEGCKLI----RKEKSSYGFVDYYDRRS 114
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ +NG + +R+ A Q +D ++ +FVG+L VT
Sbjct: 115 AALAILTLNGKQIFGQLIRVNWAYAS------------GQREDTTDHFNIFVGDLSPEVT 162
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ ++ G FV F ++ A+ A+ LNG LG + IR
Sbjct: 163 DSALFAFFSGYSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGSRQIR 222
Query: 343 LSWG-RSPSNKQAQPDPNQ 360
+W + SN + Q ++
Sbjct: 223 CNWATKGASNGEQQTSDSK 241
>gi|431891176|gb|ELK02053.1| tRNA selenocysteine 1-associated protein 1 [Pteropus alecto]
Length = 270
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 119/182 (65%), Gaps = 7/182 (3%)
Query: 89 LQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTP 147
L+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L NG P
Sbjct: 18 LEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKP 77
Query: 148 MPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAK 205
+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YPS +G K
Sbjct: 78 LPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGK 135
Query: 206 VVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKTVSASYQNS 264
VV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K + + S
Sbjct: 136 VVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASRVKPVEYS 194
Query: 265 QV 266
Q+
Sbjct: 195 QM 196
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 190 LQETFRARYPSTKG-----AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+ E F +R +T G K++ +RLTG GY FV F D + + + ++NG +
Sbjct: 22 MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKING-----K 76
Query: 245 PM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQY---- 299
P+ PA K A+Y Q D+ P ++FVG+L V D L E F +
Sbjct: 77 PLPGATPAKRFKLNYATYGK----QPDNSP-EYSLFVGDLTPDVDDGMLYEFFVKVYPSC 131
Query: 300 --GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
G++V + K GFV+F D + AL G LG + +RLS
Sbjct: 132 RGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLS 179
>gi|326524289|dbj|BAK00528.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 429
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 166/338 (49%), Gaps = 44/338 (13%)
Query: 41 MMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQ--PG----EIRTLWIGDLQYWMD 94
M MPP PP AA PQ + P G PG R++++G++ +
Sbjct: 23 MYAMPP-----PPHHHLLGAAPPQQ----IEPILTGNLPPGFDTSTCRSVYVGNIHVQVT 73
Query: 95 ETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQN 154
E L F G V K+IR +++ YGF+++ R A + T NG + Q
Sbjct: 74 EALLREVFQSAGSVDGCKLIRKEKSS----YGFVDYYERGSAALAILTLNGKQIFG--QP 127
Query: 155 FRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGR 214
R+NWA + +G++ D T IFVGDL+ +VTD L F A P+ A+V+ D+ TGR
Sbjct: 128 IRVNWA-YASGQREDTTDHFHIFVGDLSPEVTDSALFAFFSAYSPNCSDARVMWDQKTGR 186
Query: 215 TKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT-------------NKKTVSAS- 260
++GYGFV F ++ + A+ ++NG + R +R AT +K V +
Sbjct: 187 SRGYGFVSFRNQQDAQSAINDLNGQWLGNRQIRCNWATKGANSGEDQLASDSKSIVDVNN 246
Query: 261 --YQNSQVAQSDDDPNNT----TVFVGNLDSIVTDEHLRELFSQY--GQLVHVKIPAGKR 312
+N++ ++D P N TV+VGNL VT + L F G + V++ GK
Sbjct: 247 NFTENAKQKSNEDAPENNPLYRTVYVGNLAHEVTQDVLHRFFHALGAGAIEEVRVQHGKG 306
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
GFV++++ + A++ NG LGG+ ++ SWG P+
Sbjct: 307 FGFVKYSNHAETALAIQTGNGRILGGKPVKCSWGNKPT 344
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VT+ +L+E F++ S G K++ YGFV + +
Sbjct: 56 DTSTCRSVYVGNIHVQVTEALLREVFQSA-GSVDGCKLI----RKEKSSYGFVDYYERGS 110
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ +NG +P+R+ A Q +D ++ +FVG+L VT
Sbjct: 111 AALAILTLNGKQIFGQPIRVNWAYAS------------GQREDTTDHFHIFVGDLSPEVT 158
Query: 289 DEHLRELFSQYG-------QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
D L FS Y + K + GFV F ++ A+ A+ LNG LG + I
Sbjct: 159 DSALFAFFSAYSPNCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGNRQI 218
Query: 342 RLSWGRSPSN 351
R +W +N
Sbjct: 219 RCNWATKGAN 228
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--GFVQFADRSCAEEAL 328
D +V+VGN+ VT+ LRE+F G + K+ ++ GFV + +R A A+
Sbjct: 56 DTSTCRSVYVGNIHVQVTEALLREVFQSAGSVDGCKLIRKEKSSYGFVDYYERGSAALAI 115
Query: 329 RMLNGTQLGGQNIRLSWGRSPSNKQAQPD 357
LNG Q+ GQ IR++W + ++ D
Sbjct: 116 LTLNGKQIFGQPIRVNWAYASGQREDTTD 144
>gi|357121988|ref|XP_003562698.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 427
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 156/318 (49%), Gaps = 41/318 (12%)
Query: 63 PQAAGVAVPPQQQGQP------------GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVA 110
PQ + PP QQ +P R++++G++ + E L F TG V
Sbjct: 31 PQHHLLGAPPPQQIEPILTGNLPPGFDASTCRSVYVGNIHVHVTEAVLREVFQSTGSVEG 90
Query: 111 VKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDD 170
K+IR +++ YGF+++ R A + NG + Q R+NWA + +G++ D
Sbjct: 91 CKLIRKEKSS----YGFVDYYERGSAALAILQLNGRQIFG--QPIRVNWA-YASGQREDT 143
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
T IFVGDL+A+VTD L F S A+V+ D+ TGR++GYGFV F ++ +
Sbjct: 144 TDHFNIFVGDLSAEVTDSALFAFFSGYSSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQ 203
Query: 231 RAMTEMNGVFCSTRPMRIGPAT------------NKKTVSASYQN----SQVAQSDDDPN 274
A+ ++NG + R +R AT + K+++ N + ++D P
Sbjct: 204 SAINDLNGQWLGNRQIRCNWATKGANSVEDQQTSDSKSIAGVTNNFTEDGKEKANEDAPE 263
Query: 275 NT----TVFVGNLDSIVTDEHLRELFSQY--GQLVHVKIPAGKRCGFVQFADRSCAEEAL 328
N TV+VGNL T + L F G + V++ GK GFV+++ + A A+
Sbjct: 264 NNPLYRTVYVGNLAHEATQDVLHRFFYALGAGAIEEVRVQHGKGFGFVKYSSHAEAALAI 323
Query: 329 RMLNGTQLGGQNIRLSWG 346
+M NG LGG+ I+ SWG
Sbjct: 324 QMGNGCILGGKPIKCSWG 341
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 24/190 (12%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VT+ +L+E F++ S +G K++ YGFV + +
Sbjct: 57 DASTCRSVYVGNIHVHVTEAVLREVFQST-GSVEGCKLI----RKEKSSYGFVDYYERGS 111
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ ++NG +P+R+ A Q +D ++ +FVG+L + VT
Sbjct: 112 AALAILQLNGRQIFGQPIRVNWAYAS------------GQREDTTDHFNIFVGDLSAEVT 159
Query: 289 DEHLRELFSQYGQ-------LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
D L FS Y + K + GFV F ++ A+ A+ LNG LG + I
Sbjct: 160 DSALFAFFSGYSSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGNRQI 219
Query: 342 RLSWGRSPSN 351
R +W +N
Sbjct: 220 RCNWATKGAN 229
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--GFVQFADRSCAEEAL 328
D +V+VGN+ VT+ LRE+F G + K+ ++ GFV + +R A A+
Sbjct: 57 DASTCRSVYVGNIHVHVTEAVLREVFQSTGSVEGCKLIRKEKSSYGFVDYYERGSAALAI 116
Query: 329 RMLNGTQLGGQNIRLSWGRSPSNKQAQPD 357
LNG Q+ GQ IR++W + ++ D
Sbjct: 117 LQLNGRQIFGQPIRVNWAYASGQREDTTD 145
>gi|345571041|gb|EGX53856.1| hypothetical protein AOL_s00004g515 [Arthrobotrys oligospora ATCC
24927]
Length = 496
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 175/382 (45%), Gaps = 55/382 (14%)
Query: 58 TQAAAPQAAGVAVPPQQQG-------QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVA 110
T +P +A V P G +P + R L++G L + + L F TG VV+
Sbjct: 48 TAITSPMSASVTSPTSAGGFVRRAAPEPNK-RALYVGGLDPRVTDDILRQIFETTGHVVS 106
Query: 111 VKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDD 170
VK+I +K YGF+E+ AER +QT NG + E R+NWA + ++D
Sbjct: 107 VKIIPDKNAKGFN-YGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSSQAAKED 163
Query: 171 TPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
T H IFVGDL+ +V D +LQ+ F + + A+V+ D TGR++GYGFV + + S+
Sbjct: 164 TSHHFHIFVGDLSNEVNDELLQQAFTT-FGTISEARVMWDMKTGRSRGYGFVAYRERSDA 222
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNN-------------- 275
+A++ M+G + +R +R A K S S Q SQ+AQ P
Sbjct: 223 EKALSAMDGEWLGSRAIRCNWANQKGQPSIS-QQSQMAQMGMTPTTPFGHHHFPTHGIQS 281
Query: 276 ------------TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSC 323
TTV+VGNL T L LF +G +V + A + F++
Sbjct: 282 YDMIVQQTPQWQTTVYVGNLTPYTTQNDLLPLFQNFGYIVETRFQADRGFAFIKMDTHEN 341
Query: 324 AEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQ 383
A A+ L+G + G+ ++ SWG+ +P Q++ GY G PQ
Sbjct: 342 AAMAICQLSGYNVNGRPLKCSWGKD------RPPTGQFD--------GYSPQG-GPQTPQ 386
Query: 384 DPSMYYGGYPGYGNYQQPQQPQ 405
P+ + +P YG P PQ
Sbjct: 387 FPNSPFSNFPQYGGPGGPMSPQ 408
>gi|384484722|gb|EIE76902.1| hypothetical protein RO3G_01606 [Rhizopus delemar RA 99-880]
Length = 204
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 98/148 (66%), Gaps = 6/148 (4%)
Query: 212 TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK-----KTVSASYQNSQV 266
TG ++GYGFVRF D+ EQ +A+TEMNG+ C RPMR+ AT K + + + Q +
Sbjct: 6 TGLSRGYGFVRFSDQQEQQQAVTEMNGILCKNRPMRVSFATPKTNNQERYIQLALQAPAL 65
Query: 267 AQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEE 326
Q DPNNTTVF+G L S VT++ LR+ F +G +++VK+P GK CGFVQ+ R AE
Sbjct: 66 VQQPTDPNNTTVFIGGLSSPVTEDELRQYFGSFGDIMNVKLPPGKGCGFVQYTTRISAET 125
Query: 327 ALRMLNGTQLGGQNIRLSWGRSPSNKQA 354
A+ +NG +G IRLSWGRS SN Q+
Sbjct: 126 AIEKMNGFLIGTSRIRLSWGRS-SNHQS 152
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 21/171 (12%)
Query: 114 IRNKQTGQIEGYGFIEFISRAGAERVLQTFNG-------------TPMPNGEQNF-RLNW 159
+ N TG GYGF+ F + ++ + NG TP N ++ + +L
Sbjct: 1 MTNSSTGLSRGYGFVRFSDQQEQQQAVTEMNGILCKNRPMRVSFATPKTNNQERYIQLAL 60
Query: 160 ASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYG 219
+ ++ D + T+F+G L++ VT+ L++ F + G + + G KG G
Sbjct: 61 QAPALVQQPTDPNNTTVFIGGLSSPVTEDELRQYF-----GSFGDIMNVKLPPG--KGCG 113
Query: 220 FVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSD 270
FV++ A+ +MNG T +R+ + S + + Q+A +D
Sbjct: 114 FVQYTTRISAETAIEKMNGFLIGTSRIRLSWGRSSNHQSDTMNSKQMANND 164
>gi|336469273|gb|EGO57435.1| hypothetical protein NEUTE1DRAFT_129383 [Neurospora tetrasperma
FGSC 2508]
Length = 494
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 135/456 (29%), Positives = 195/456 (42%), Gaps = 77/456 (16%)
Query: 4 PAPGAVPPPPPPMAA---HQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQA 60
P G +PPPP P A ++ A PPP + +P P A+ +
Sbjct: 8 PTTGQLPPPPQPNAGAPGYENGQNNNANSAHMPPPP-----LHIPQNTNPIPTAITSPMG 62
Query: 61 AAPQAAGVAVPPQQQGQP--------GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
+G+ + P G P R L++G L + E L F TG V VK
Sbjct: 63 GNGDTSGI-MSPTSAGNPFGRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQNVK 121
Query: 113 VIRNKQTG-----------QIEGY--GFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNW 159
+I +K G Q +GY GF+E+ AER +QT NG + E R+NW
Sbjct: 122 IIPDKNVGKPGSEQPRDEKQQKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNW 179
Query: 160 ASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGY 218
A + ++DT H IFVGDL+ +V D +L + F A + S A+V+ D TGR++GY
Sbjct: 180 AYQSNNQNKEDTSGHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGY 238
Query: 219 GFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK---------------TVSASYQN 263
GFV F D + +A++ M+G + +R +R A K T + Y +
Sbjct: 239 GFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGLTPTTPYGH 298
Query: 264 SQ------------VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 311
VAQ+ TT +VGNL T L LF +G +V + A +
Sbjct: 299 HHFPTHGVHSYDMIVAQTPAW--QTTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQADR 356
Query: 312 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQG 371
F++ A A+ LNG Q+ G+ ++ SWG+ + Q DPNQ + G
Sbjct: 357 GFAFIKMDTHENAAMAICQLNGYQVNGRPLKCSWGKDKTPNPQQFDPNQPYSPQSAQTPG 416
Query: 372 YENYGYAAAAPQDPSMYY----GGYPG-YGNYQQPQ 402
Y P PS Y+ YPG GNY PQ
Sbjct: 417 Y---------PGTPSTYFNNYGNSYPGQQGNYNGPQ 443
>gi|336271351|ref|XP_003350434.1| hypothetical protein SMAC_02147 [Sordaria macrospora k-hell]
gi|380090956|emb|CCC11489.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 495
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 180/410 (43%), Gaps = 64/410 (15%)
Query: 4 PAPGAVPPPPPPMAA---HQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQA 60
P G +PPPP P A ++ + P PPP + +P P A+ +
Sbjct: 8 PTTGQLPPPPQPNAGAPGYENGQNNNSNPAHMPPPP-----LHIPQNTNPIPTAITSPMG 62
Query: 61 AAPQAAGVAVPPQQQGQP--------GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
+G+ + P G P R L++G L + E L F TG V VK
Sbjct: 63 GNGDTSGI-MSPTSAGNPFGRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQNVK 121
Query: 113 VIRNKQTG------------QIEGY--GFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158
+I +K G Q +GY GF+E+ AER +QT NG + E R+N
Sbjct: 122 IIPDKNVGKPGSPEQPHDAQQQKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVN 179
Query: 159 WASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKG 217
WA + ++DT H IFVGDL+ +V D +L + F A + S A+V+ D TGR++G
Sbjct: 180 WAYQSNNQNKEDTSGHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRG 238
Query: 218 YGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK---------------TVSASYQ 262
YGFV F D + +A++ M+G + +R +R A K T + Y
Sbjct: 239 YGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGLTPTTPYG 298
Query: 263 NSQ------------VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG 310
+ VAQ+ TT +VGNL T L LF +G +V + A
Sbjct: 299 HHHFPTHGVHSYDMIVAQTPAW--QTTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQAD 356
Query: 311 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ 360
+ F++ A A+ LNG Q+ G+ ++ SWG+ + Q DPNQ
Sbjct: 357 RGFAFIKMDTHENAAMAICQLNGYQVNGRPLKCSWGKDKTPNPQQFDPNQ 406
>gi|318037555|ref|NP_001188239.1| tRNA selenocysteine 1-associated protein 1-like [Ictalurus
punctatus]
gi|308324633|gb|ADO29451.1| tRNA selenocysteine 1-associated protein 1-like [Ictalurus
punctatus]
Length = 315
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 113/187 (60%), Gaps = 7/187 (3%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVV-AVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +LW+GDL +MDE ++ F+ GE VK+I ++ TG GY F+E A +R
Sbjct: 5 MTSLWMGDLDPYMDENFIKQAFSTMGETAYGVKIITHRVTGGSAGYCFVELADEASVDRC 64
Query: 140 LQTFNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+Q NG +P N + F+LN+A++G ++ + P+ ++FVGDL +V DY L + F +
Sbjct: 65 VQRLNGKLVPGSNPPRKFKLNYATYG--KRPEPGPEFSVFVGDLTPEVDDYQLHQFFLKK 122
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM-NGVFCSTRPMRIGPATNKKT 256
YPS KGAKVV D G +KGYGFV+FGDESEQ +A+ E N + +RI A NK
Sbjct: 123 YPSCKGAKVVTDPY-GNSKGYGFVKFGDESEQKKALEEFQNATGLGGKAIRISIAVNKSN 181
Query: 257 VSASYQN 263
S SY N
Sbjct: 182 KSNSYHN 188
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 18/186 (9%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + +++ F + G K++ R+TG + GY FV DE+ R +
Sbjct: 7 SLWMGDLDPYMDENFIKQAFSTMGETAYGVKIITHRVTGGSAGYCFVELADEASVDRCVQ 66
Query: 235 EMNGVFCSTRPMRIGPATNK-KTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
+NG ++ P +N + +Y + + + +VFVG+L V D L
Sbjct: 67 RLNG--------KLVPGSNPPRKFKLNY--ATYGKRPEPGPEFSVFVGDLTPEVDDYQLH 116
Query: 294 ELF-SQYGQLVHVKI---PAG--KRCGFVQFADRSCAEEALRML-NGTQLGGQNIRLSWG 346
+ F +Y K+ P G K GFV+F D S ++AL N T LGG+ IR+S
Sbjct: 117 QFFLKKYPSCKGAKVVTDPYGNSKGYGFVKFGDESEQKKALEEFQNATGLGGKAIRISIA 176
Query: 347 RSPSNK 352
+ SNK
Sbjct: 177 VNKSNK 182
>gi|259488599|tpe|CBF88164.1| TPA: nuclear and cytoplasmic polyadenylated RNA-binding protein
pub1 (AFU_orthologue; AFUA_1G12000) [Aspergillus
nidulans FGSC A4]
Length = 477
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 145/293 (49%), Gaps = 30/293 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ-TGQIEGYGFIEFISRAGAERVL 140
R L++G L + E L F TG V++VK+I +K + YGF+EF AER +
Sbjct: 90 RALYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNFNSKGANYGFVEFDDPGAAERAM 149
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A +
Sbjct: 150 QTLNGRRIHQSE--IRVNWAYQSNTANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FG 206
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S A+V+ D TGR++GYGFV F + ++ +A+T M+G + +R +R A K S
Sbjct: 207 SVSEARVMWDMKTGRSRGYGFVAFRERADAEKALTSMDGEWLGSRAIRCNWANQKGQPSI 266
Query: 260 SYQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLRE 294
S Q + A QS D P TT +VGNL T +
Sbjct: 267 SQQQAMAAMGMTPTTPFGHHHFPTHGIQSYDMVVQQTPAWQTTCYVGNLTPYTTQNDIVP 326
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
LF +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 327 LFQNFGYVIETRMQADRGFAFIKMDTHENAASAICQLNGYNVNGRPLKCSWGK 379
>gi|350629665|gb|EHA18038.1| hypothetical protein ASPNIDRAFT_176547 [Aspergillus niger ATCC
1015]
Length = 496
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 145/293 (49%), Gaps = 30/293 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ-TGQIEGYGFIEFISRAGAERVL 140
R L++G L + E L F TG VV+VK+I +K + YGF+EF AER +
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFNSKGYNYGFVEFDDPGAAERAM 150
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A +
Sbjct: 151 QTLNGRRIHQSE--IRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FG 207
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S A+V+ D TGR++GYGFV F + S+ +A++ M+G + +R +R A K S
Sbjct: 208 SVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQKGQPSI 267
Query: 260 SYQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLRE 294
S Q + A QS D P TT +VGNL T L
Sbjct: 268 SQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQTDLVP 327
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
LF +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 328 LFQNFGYVIETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 380
>gi|67517823|ref|XP_658695.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
gi|40747053|gb|EAA66209.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
Length = 892
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 145/294 (49%), Gaps = 31/294 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG--YGFIEFISRAGAERV 139
R L++G L + E L F TG V++VK+I +K +G YGF+EF AER
Sbjct: 90 RALYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNQFNSKGANYGFVEFDDPGAAERA 149
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A +
Sbjct: 150 MQTLNGRRIHQSE--IRVNWAYQSNTANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 206
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S A+V+ D TGR++GYGFV F + ++ +A+T M+G + +R +R A K S
Sbjct: 207 GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALTSMDGEWLGSRAIRCNWANQKGQPS 266
Query: 259 ASYQNSQVA-------------------QSDD------DPNNTTVFVGNLDSIVTDEHLR 293
S Q + A QS D TT +VGNL T +
Sbjct: 267 ISQQQAMAAMGMTPTTPFGHHHFPTHGIQSYDMVVQQTPAWQTTCYVGNLTPYTTQNDIV 326
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
LF +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 327 PLFQNFGYVIETRMQADRGFAFIKMDTHENAASAICQLNGYNVNGRPLKCSWGK 380
>gi|342870153|gb|EGU73450.1| hypothetical protein FOXB_16088 [Fusarium oxysporum Fo5176]
Length = 474
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 133/437 (30%), Positives = 197/437 (45%), Gaps = 64/437 (14%)
Query: 6 PGAVPPPPPPMA-AHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQ 64
PG +PPPP A A ++ Q P PP + +P P A+ + ++AA Q
Sbjct: 10 PGQLPPPPQAGAGAPGFEAGQNGQPMAPPP-------LHIPQNTNPIPTAITSPRSAADQ 62
Query: 65 AAGVAVPPQQQG------QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ 118
G+ P G +P + R L+IG L + E L F TG V VK+I +K
Sbjct: 63 G-GIMSPTSAGGFRRAAPEPNK-RALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKN 120
Query: 119 TGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIF 177
+ YGF+E+ AER +QT NG + E R+NWA ++DT +H IF
Sbjct: 121 A-RGYNYGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNTTNKEDTSNHFHIF 177
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDL+ +V D +L + F A + S A+V+ D TGR++GYGFV F D E +A++ M+
Sbjct: 178 VGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMD 236
Query: 238 GVFCSTRPMRIGPATNK---------------KTVSASYQNSQ----------VAQSDDD 272
G + +R +R A K T + Y + Q V +
Sbjct: 237 GEWLGSRAIRCNWANQKGQPSMAQQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQTP 296
Query: 273 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLN 332
TTV+VGNL T + LF +G +V + A + F++ A A+ +N
Sbjct: 297 SWQTTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQMN 356
Query: 333 GTQLGGQNIRLSWGRSPS-NKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY--- 388
G + G+ ++ SWG+ + + Q DP Q + A G+ P P+ Y
Sbjct: 357 GYNVNGRPLKCSWGKDKTPSAQGAFDPAQPYSPQSAQAPGF---------PGTPTYYPQY 407
Query: 389 ---YGGYPGYGNYQQPQ 402
YGG P GNY PQ
Sbjct: 408 GAQYGGQP--GNYGGPQ 422
>gi|348531393|ref|XP_003453194.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Oreochromis niloticus]
Length = 360
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 115/186 (61%), Gaps = 7/186 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL +MDE ++ F+ GE VK+I ++ TG GY F+E A ER +Q
Sbjct: 7 SLWMGDLDPYMDENFIKQAFSAMGESPFGVKIITHRITGGSAGYCFVELADEASVERCVQ 66
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG +P + F+LN+A++G ++ + P+ ++FVGDLA+++ D+ L + F+ +YP
Sbjct: 67 RLNGKLVPGSNPPRKFKLNYATYG--KRPEAGPEFSVFVGDLASEIDDFQLHQVFK-KYP 123
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S KGAKVV D+ G ++GYGFV+FG+ESEQ +A+ E G +P+R+ A K +
Sbjct: 124 SCKGAKVVTDQY-GYSRGYGFVKFGEESEQKKAIEECQGTMLGGKPLRLSIAVAKSQKMS 182
Query: 260 SYQNSQ 265
SY Q
Sbjct: 183 SYHGGQ 188
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 108/243 (44%), Gaps = 41/243 (16%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + +++ F A S G K++ R+TG + GY FV DE+ R +
Sbjct: 7 SLWMGDLDPYMDENFIKQAFSAMGESPFGVKIITHRITGGSAGYCFVELADEASVERCVQ 66
Query: 235 EMNGVFCST----RPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDE 290
+NG R ++ AT K A + S VFVG+L S + D
Sbjct: 67 RLNGKLVPGSNPPRKFKLNYATYGKRPEAGPEFS-------------VFVGDLASEIDDF 113
Query: 291 HLRELFSQY-----GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 345
L ++F +Y ++V + + GFV+F + S ++A+ GT LGG+ +RLS
Sbjct: 114 QLHQVFKKYPSCKGAKVVTDQYGYSRGYGFVKFGEESEQKKAIEECQGTMLGGKPLRLSI 173
Query: 346 GRSPSNKQA----------QPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGY 395
+ S K + Q + NQ +GYYG G Q +GGY Y
Sbjct: 174 AVAKSQKMSSYHGGQGQNYQSNYNQTQSGYYGSHSG---------GSQGYYSQWGGYDQY 224
Query: 396 GNY 398
G Y
Sbjct: 225 GGY 227
>gi|443710130|gb|ELU04461.1| hypothetical protein CAPTEDRAFT_181109 [Capitella teleta]
Length = 297
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 112/178 (62%), Gaps = 7/178 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
TLW+GDL+ +MDE +++ F GE VV+VKVI+NK TG GY F+EF + GA R +
Sbjct: 8 TLWMGDLEPYMDEAFISNAFHTMGEGVVSVKVIKNKHTGMPTGYCFVEFPDQEGAHRAML 67
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
+ NG +P + F+LN ASF G + + P+ ++FVGDL DV D +L F Y
Sbjct: 68 SLNGKIVPGSMPYKRFKLNHASF--GREHLNVPEFSLFVGDLTEDVDDLILYSHFHTHYK 125
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM-NGVFCSTRPMRIGPATNKKT 256
+ +GAKVV+D G+++GYGFVRF E +Q +A+ EM + +P+R+ AT KKT
Sbjct: 126 NLRGAKVVVDE-NGKSRGYGFVRFTCEKDQQKALVEMQHYTGIGRKPIRVSLATPKKT 182
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 99/241 (41%), Gaps = 26/241 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GDL + + + F KV+ ++ TG GY FV F D+ RAM
Sbjct: 8 TLWMGDLEPYMDEAFISNAFHTMGEGVVSVKVIKNKHTGMPTGYCFVEFPDQEGAHRAML 67
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
+NG P + P K AS+ + + ++FVG+L V D L
Sbjct: 68 SLNGKIV---PGSM-PYKRFKLNHASFGREHLNVPE-----FSLFVGDLTEDVDDLILYS 118
Query: 295 LF-SQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEAL-RMLNGTQLGGQNIRLSWGR 347
F + Y L K+ + GFV+F ++AL M + T +G + IR+S
Sbjct: 119 HFHTHYKNLRGAKVVVDENGKSRGYGFVRFTCEKDQQKALVEMQHYTGIGRKPIRVSLA- 177
Query: 348 SPSNKQAQPDPNQWNA----GYYGYAQGYENYGYAAA---APQDPSMYYGGYPGYGNYQQ 400
+P QA + A GY Y G N GY A Q P YGGY Y +
Sbjct: 178 TPKKTQAGMTGGTYTASSSSGYDYYQGGAYNQGYYNNWWQAYQQPG--YGGYDSYMGHSD 235
Query: 401 P 401
P
Sbjct: 236 P 236
>gi|46122079|ref|XP_385593.1| hypothetical protein FG05417.1 [Gibberella zeae PH-1]
Length = 473
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 176/388 (45%), Gaps = 47/388 (12%)
Query: 6 PGAVPPPPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQA 65
PG +PPP A Y+ Q P PP + +P P A+ + ++A
Sbjct: 10 PGQLPPPQAGAGAPGYEAGQNGQPMAPPP-------LHIPQNNNPIPTAITSPRSA--DN 60
Query: 66 AGVAVPPQQQG------QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQT 119
G+ P G +P + R L+IG L + E L F TG V VK+I +K
Sbjct: 61 GGIMSPTSAGGFRRAAPEPNK-RALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNA 119
Query: 120 GQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFV 178
+ YGF+E+ AER +QT NG + E R+NWA ++DT +H IFV
Sbjct: 120 -RGYNYGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNTTNKEDTSNHFHIFV 176
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDL+ +V D +L + F A + S A+V+ D TGR++GYGFV F D E +A++ M+G
Sbjct: 177 GDLSNEVNDEVLTQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDG 235
Query: 239 VFCSTRPMRIGPATNKK---------------TVSASYQNSQ----------VAQSDDDP 273
+ +R +R A K T + Y + Q V +
Sbjct: 236 EWLGSRAIRCNWANQKGQPSMAQQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQTPS 295
Query: 274 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG 333
TTV+VGNL T + LF +G +V + A + F++ A A+ +NG
Sbjct: 296 WQTTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMDSHENAAMAICQMNG 355
Query: 334 TQLGGQNIRLSWGRSPS-NKQAQPDPNQ 360
+ G+ ++ SWG+ + N Q DP Q
Sbjct: 356 YNVNGRPLKCSWGKDKTPNAQGGFDPVQ 383
>gi|361127946|gb|EHK99901.1| putative Nucleolysin TIA-1 [Glarea lozoyensis 74030]
Length = 505
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 164/360 (45%), Gaps = 52/360 (14%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTG---QIEG--YGFIEFISRAGA 136
R L++G L + E L F TG V VK+I +K G Q +G YGF+E+ A
Sbjct: 87 RALYVGGLDPRVTEDVLRQIFETTGHVQHVKIIPDKNVGAEQQAKGFNYGFVEYDDPGAA 146
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFR 195
ER +QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F
Sbjct: 147 ERAMQTLNGRRVHQAE--IRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFS 204
Query: 196 ARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255
A + S A+V+ D TGR++GYGFV F + + +A++ M+G + +R +R A K
Sbjct: 205 A-FGSVSEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKG 263
Query: 256 --TVSASYQNSQVAQSDDDPNN-----------------------TTVFVGNLDSIVTDE 290
++S Q S + + P TT +VGNL T
Sbjct: 264 QPSISQQQQMSAMGMTPTTPFGHHHFPTHGVQSFDMIVQQTPAWQTTCYVGNLTPYTTQN 323
Query: 291 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
L LF +G +V + A + FV+ A A+ L+G + G+ ++ SWG+ +
Sbjct: 324 DLIPLFQNFGFVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDKA 383
Query: 351 NKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGG-----YPGYGNYQQPQQPQ 405
Q G+ QG GY+ Q P Y G +P YG QP PQ
Sbjct: 384 PTQD------------GFPQGTPT-GYSPQGGQTPGGYGSGAQSAYFPQYGGMPQPAGPQ 430
>gi|453087889|gb|EMF15930.1| RRM_1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 486
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 163/343 (47%), Gaps = 37/343 (10%)
Query: 34 PPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWM 93
PP P+P + + PQ P T +P +AG V ++ R L++G L +
Sbjct: 36 PPPPAPSLNVNIPQ-NHNPVPTELTDILSPTSAGGQV--RRAAPEPNKRALYVGGLDPRV 92
Query: 94 DETYLNTCFAHTGEVVAVKVIRNKQTGQIEGY--GFIEFISRAGAERVLQTFNGTPMPNG 151
E L F TG V +VK+I +K Q +GY GF+E+ AER +QT NG +
Sbjct: 93 TEDVLKQIFETTGHVQSVKIIPDKNF-QSKGYNYGFVEYDDPGAAERAMQTLNGRRV--H 149
Query: 152 EQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDR 210
+Q R+NWA ++DT +H IFVGDL+ +V D +L + F A + + A+V+ D
Sbjct: 150 QQEIRVNWAYQSNTSAKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGTVSEARVMWDM 208
Query: 211 LTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSD 270
TGR++GYGF F D E +A++ M+G + +R +R A K S S Q + +AQ
Sbjct: 209 KTGRSRGYGFAAFRDRGEAEKALSSMDGEWLGSRAIRCNWANQKGQPSFSQQQA-MAQMG 267
Query: 271 DDPNN--------------------------TTVFVGNLDSIVTDEHLRELFSQYGQLVH 304
P TTV+VGNL T L LF +G +
Sbjct: 268 MTPTTPYGHHQFPTQGSQSYEMIVQQTPQWQTTVYVGNLTPYTTQNDLVPLFQNFGYVTE 327
Query: 305 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
+ + + F++ A A+ L+G Q+ G+ ++ SWG+
Sbjct: 328 TRFQSDRGFAFIKMDTHENAANAICQLSGYQVNGRPLKCSWGK 370
>gi|296423176|ref|XP_002841131.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637365|emb|CAZ85322.1| unnamed protein product [Tuber melanosporum]
Length = 498
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 161/351 (45%), Gaps = 49/351 (13%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K + YGFIE+ AER +Q
Sbjct: 86 RALYVGGLDPRVTEEILKQIFETTGHVQNVKIIPDKNSKGYN-YGFIEYDDPGAAERAMQ 144
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F + + S
Sbjct: 145 TLNGRRIHQAE--IRVNWAYQSNQSSKEDTTNHFHIFVGDLSNEVNDEVLMQAF-STFGS 201
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D TGR++GYGFV F D ++ +A++ M+G + +R +R A K S S
Sbjct: 202 VSEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 261
Query: 261 YQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLREL 295
Q + A QS D P TT +VGNL T L L
Sbjct: 262 QQAAMAAMGMTPTTPYGHHNFPTHGVQSYDMIVQQTPQWQTTCYVGNLTPYTTQNDLVPL 321
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG--RSPSNKQ 353
F +G +V + A + FV+ A A+ L+G + G+ ++ SWG R P+ +
Sbjct: 322 FQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDRPPTGQF 381
Query: 354 AQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNYQQPQQP 404
P Q N Y PQ PS Y +P YG PQ P
Sbjct: 382 DAYSPQQPNTPQY--------------PPQTPSAY---FPQYGGPMTPQGP 415
>gi|408392881|gb|EKJ72170.1| hypothetical protein FPSE_07657 [Fusarium pseudograminearum CS3096]
Length = 484
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 179/397 (45%), Gaps = 54/397 (13%)
Query: 6 PGAVPPPPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQA 65
PG +PPP A Y+ Q P PP + +P P A+ + ++A
Sbjct: 10 PGQLPPPQAGAGAPGYEAGQNGQPMAPPP-------LHIPQNNNPIPTAITSPRSA--DN 60
Query: 66 AGVAVPPQQQG------QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQT 119
G+ P G +P + R L+IG L + E L F TG V VK+I +K
Sbjct: 61 GGIMSPTSAGGFRRAAPEPNK-RALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNA 119
Query: 120 GQIEGYGFIEFISRAGAERVLQTFNG------TPMPNGEQN---FRLNWASFGAGEKRDD 170
+ YGF+E+ AER +QT NG P P+ +N R+NWA ++D
Sbjct: 120 -RGYNYGFVEYDDPGAAERAMQTLNGRRVHQSVPYPDTTRNSKEIRVNWAYQSNTTNKED 178
Query: 171 TPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
T +H IFVGDL+ +V D +L + F A + S A+V+ D TGR++GYGFV F D E
Sbjct: 179 TSNHFHIFVGDLSNEVNDEVLTQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRDRPEA 237
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKK---------------TVSASYQNSQ--------- 265
+A++ M+G + +R +R A K T + Y + Q
Sbjct: 238 EKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQAMQAMGMTPTTPYGHHQFPAHGVASY 297
Query: 266 -VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 324
V + TTV+VGNL T + LF +G +V + A + F++ A
Sbjct: 298 EVILTQTPSWQTTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMDSHENA 357
Query: 325 EEALRMLNGTQLGGQNIRLSWGRSPS-NKQAQPDPNQ 360
A+ +NG + G+ ++ SWG+ + N Q DP Q
Sbjct: 358 AMAICQMNGYNVNGRPLKCSWGKDKTPNAQGGFDPVQ 394
>gi|449273177|gb|EMC82785.1| tRNA selenocysteine 1-associated protein 1, partial [Columba livia]
Length = 278
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 113/170 (66%), Gaps = 7/170 (4%)
Query: 89 LQYWMDETYLNTCFAHTGEVV-AVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTP 147
L+ +MDE +++ FA GE+V +VK+IRN+ TG GY F+EF A AE+ L NG P
Sbjct: 1 LEPYMDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKP 60
Query: 148 MPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAK 205
+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YPS +G K
Sbjct: 61 LPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGK 118
Query: 206 VVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
VV+D+ G ++GYGFV+F DE EQ RA+TE G V ++P+R+ A K
Sbjct: 119 VVLDQ-AGVSRGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 167
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 190 LQETFRARYPSTKG-----AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+ E F +R +T G K++ +RLTG GY FV F D + + + ++NG +
Sbjct: 5 MDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKING-----K 59
Query: 245 PM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQY---- 299
P+ PA K A+Y Q D+ P ++FVG+L V D L E F +
Sbjct: 60 PLPGATPAKRFKLNYATYGK----QPDNSP-EYSLFVGDLTPDVDDGMLYEFFVKVYPSC 114
Query: 300 --GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPSNK 352
G++V + + GFV+F D + AL G LG + +RLS +N+
Sbjct: 115 RGGKVVLDQAGVSRGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKANR 170
>gi|165935740|gb|ABY75165.1| RNA binding protein [Arachis diogoi]
Length = 142
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 98/139 (70%), Gaps = 6/139 (4%)
Query: 267 AQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEE 326
+QS+ D NTT+FVG LD VTDE LR+ FSQYG++V VK+P GK CGFVQFA R+ AEE
Sbjct: 2 SQSEADSTNTTIFVGGLDPNVTDEDLRQQFSQYGEIVSVKVPVGKGCGFVQFAIRNNAEE 61
Query: 327 ALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD--PNQWNAGYYGYAQGYENYGYAAAAPQD 384
AL+ LNGT +G Q +RLSWGR+P+NKQ + D N W+ YYG A Y+ YGYA P D
Sbjct: 62 ALQKLNGTVIGKQTVRLSWGRNPANKQFRMDFGGNHWSGTYYG-APVYDGYGYALPPPHD 120
Query: 385 PSM---YYGGYPGYGNYQQ 400
PS+ Y YP YG +QQ
Sbjct: 121 PSIYAAAYAAYPIYGGHQQ 139
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + + L F+ GE+V+VKV K G GF++F R AE LQ
Sbjct: 12 TIFVGGLDPNVTDEDLRQQFSQYGEIVSVKVPVGK------GCGFVQFAIRNNAEEALQK 65
Query: 143 FNGTPMPNGEQNFRLNWA 160
NGT + G+Q RL+W
Sbjct: 66 LNGTVI--GKQTVRLSWG 81
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
D+ + TIFVG L +VTD L++ F ++Y KV + KG GFV+F +
Sbjct: 7 DSTNTTIFVGGLDPNVTDEDLRQQF-SQYGEIVSVKVPVG------KGCGFVQFAIRNNA 59
Query: 230 LRAMTEMNGVFCSTRPMRIGPATN 253
A+ ++NG + +R+ N
Sbjct: 60 EEALQKLNGTVIGKQTVRLSWGRN 83
>gi|432916416|ref|XP_004079326.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Oryzias
latipes]
Length = 345
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 115/186 (61%), Gaps = 7/186 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL +MDE ++ F+ GE VK+I ++ TG GY F+E +R +Q
Sbjct: 8 SLWMGDLDPYMDENFIKQAFSAMGESPCGVKIITHRITGGSAGYCFVELADEESVDRCVQ 67
Query: 142 TFNG--TPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG P N + F+LN+A++G ++ + P+ ++FVGDLA+++ D+ L + F+ +YP
Sbjct: 68 RLNGKLVPASNPPRKFKLNYATYG--KRPEAGPEFSVFVGDLASEIDDFQLHQVFK-KYP 124
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S KGAKVV D+ G ++GYGFV+FG+ESEQ +A+ E G +P+R+ A K +
Sbjct: 125 SCKGAKVVTDQY-GYSRGYGFVKFGEESEQKKAIEECQGTVLGGKPLRLSIAVAKSQKVS 183
Query: 260 SYQNSQ 265
+YQ Q
Sbjct: 184 NYQAGQ 189
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + +++ F A S G K++ R+TG + GY FV DE R +
Sbjct: 8 SLWMGDLDPYMDENFIKQAFSAMGESPCGVKIITHRITGGSAGYCFVELADEESVDRCVQ 67
Query: 235 EMNGVFCSTRPMRIGPATNK----KTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDE 290
+NG ++ PA+N K A+Y A + +VFVG+L S + D
Sbjct: 68 RLNG--------KLVPASNPPRKFKLNYATYGKRPEAGPE-----FSVFVGDLASEIDDF 114
Query: 291 HLRELFSQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 345
L ++F +Y K+ + GFV+F + S ++A+ GT LGG+ +RLS
Sbjct: 115 QLHQVFKKYPSCKGAKVVTDQYGYSRGYGFVKFGEESEQKKAIEECQGTVLGGKPLRLSI 174
Query: 346 GRSPSNKQAQPDPNQWNAGYYGYAQ 370
+ S K + Q + + Y+Q
Sbjct: 175 AVAKSQKVSNYQAGQGQSYHSNYSQ 199
>gi|303314025|ref|XP_003067021.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240106689|gb|EER24876.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320039295|gb|EFW21229.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides posadasii str. Silveira]
Length = 483
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 144/292 (49%), Gaps = 30/292 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V +VK+I +K + + YGF+E+ AER +Q
Sbjct: 92 RALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNSKGLN-YGFVEYDDPGAAERAMQ 150
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 151 TLNGRRVHQSE--IRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 207
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D TGR++GYGFV F + ++ +A++ M+G + +R +R A K S S
Sbjct: 208 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 267
Query: 261 YQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLREL 295
Q + A QS D P TT +VGNL T L L
Sbjct: 268 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVPL 327
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
F +G +V + A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 328 FQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 379
>gi|194701250|gb|ACF84709.1| unknown [Zea mays]
Length = 424
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 153/299 (51%), Gaps = 35/299 (11%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E+ L F G V K+IR +++ +GF+++ R A
Sbjct: 44 PSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSS----FGFVDYYDRRSAA 99
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRA 196
+ T +G + Q ++NWA A +R+DT H IFVGDL+++V D L F A
Sbjct: 100 LAIMTLHGRHIYG--QAIKVNWAY--ASTQREDTSGHFHIFVGDLSSEVNDATLYACFSA 155
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA----- 251
YPS A+V+ D TGR++GYGFV F ++ E A+TEM G + +R +R A
Sbjct: 156 -YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNS 214
Query: 252 --------------TNKKTVSASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLR 293
TN + +++ SQ A S ++P N TTV+VGNL V + L
Sbjct: 215 EEKPETDNHNAVVLTNGSSTNSATDASQDAGSKENPENNPDCTTVYVGNLGHEVNRDELH 274
Query: 294 ELFSQY--GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
F G + +++ K GFV+++ A A++M NG + G++I+ SWG P+
Sbjct: 275 RHFYNLGVGAIEEIRVQQDKGFGFVRYSTHGEAALAIQMANGLVVRGKSIKCSWGNKPT 333
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 24/201 (11%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ +VT+ +L E F+ + G + +GFV + D
Sbjct: 43 DPSTCRSVYVGNVNPNVTESLLIEVFQ-----SAGLVERCKLIRKEKSSFGFVDYYDRRS 97
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ ++G + +++ A Y ++Q +D + +FVG+L S V
Sbjct: 98 AALAIMTLHGRHIYGQAIKVNWA---------YASTQ---REDTSGHFHIFVGDLSSEVN 145
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ + G FV F ++ AE A+ + G LG + IR
Sbjct: 146 DATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIR 205
Query: 343 LSWGRSPSNKQAQPDPNQWNA 363
+W + +N + +P+ + NA
Sbjct: 206 CNWA-TKTNSEEKPETDNHNA 225
>gi|313226301|emb|CBY21445.1| unnamed protein product [Oikopleura dioica]
Length = 471
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/315 (33%), Positives = 155/315 (49%), Gaps = 25/315 (7%)
Query: 70 VPPQQQGQPGEI--RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGF 127
V +Q + EI RTL++G+L E L FA G VV +K+I N Y F
Sbjct: 33 VRLSEQAKDDEIFKRTLYVGNLHKNATENVLKALFAVIGNVVDIKMI-NDAALSTSHYCF 91
Query: 128 IEFISRAGAERVLQTFNGT---PMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
I + + GA+R L NG MP ++NWA+ G K+D + DH IFVGDLA +
Sbjct: 92 ITYETHVGAQRALAAMNGRDVYKMP-----LKVNWATRPDGIKKDTSKDHHIFVGDLAQE 146
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T LQ F ++ A+VV D T R+KGYGFV F + A+TEMN R
Sbjct: 147 LTTLDLQNEFE-KFGKISEARVVRDAQTNRSKGYGFVAFLKKESAEMAITEMNNKSICGR 205
Query: 245 PMRIGPATNKK----TVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV-TDEHLRELFSQY 299
+R AT++K TV ++ +Q + +NTTV+VG + V T + L+ FS++
Sbjct: 206 EVRTNWATSRKLPPPTVIDPHKVAQASSF----SNTTVYVGGITKDVHTQQVLQASFSRF 261
Query: 300 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPN 359
G + V+ + GFV+ A A+ +NG + G ++ WG+ + ++ D N
Sbjct: 262 GVVEEVR--TFETFGFVKMQTHQAATNAICEMNGASISGCTVKCRWGK--DDHKSSNDGN 317
Query: 360 QWNAGYYGYAQGYEN 374
Y A G +N
Sbjct: 318 HQYGHNYKEANGSQN 332
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 28/211 (13%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL + L F G++ +V+R+ QT + +GYGF+ F+ + AE +
Sbjct: 138 IFVGDLAQELTTLDLQNEFEKFGKISEARVVRDAQTNRSKGYGFVAFLKKESAEMAITEM 197
Query: 144 NGTPMPNGEQNFRLNWASF-----------GAGEKRDDTPDHTIFVGDLAADV-TDYMLQ 191
N + E R NWA+ + + T++VG + DV T +LQ
Sbjct: 198 NNKSICGRE--VRTNWATSRKLPPPTVIDPHKVAQASSFSNTTVYVGGITKDVHTQQVLQ 255
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCS--TRPMRIG 249
+F +R+ VV + T T +GFV+ A+ EMNG S T R G
Sbjct: 256 ASF-SRF------GVVEEVRTFET--FGFVKMQTHQAATNAICEMNGASISGCTVKCRWG 306
Query: 250 PATNKKTVSASYQ---NSQVAQSDDDPNNTT 277
+K + ++Q N + A + +NTT
Sbjct: 307 KDDHKSSNDGNHQYGHNYKEANGSQNSSNTT 337
>gi|403359035|gb|EJY79175.1| Nuclear acid binding protein, putative [Oxytricha trifallax]
Length = 474
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 110/210 (52%), Gaps = 34/210 (16%)
Query: 76 GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAG 135
GQ G +TLWIGD++ WMD+ Y+++ F+ V VK+IR+K G GYGF+EF +
Sbjct: 11 GQVGA-KTLWIGDVEPWMDDAYISSLFSGIASVQTVKLIRDKLKGTPVGYGFVEFPNHDV 69
Query: 136 AERVLQTFNGTPMPNGEQNFRLNWASFGAG----------------EKRDDTP------- 172
A V T NG+ +P ++++LNWA+ G G + + P
Sbjct: 70 ARNVYLTLNGSVIPGTTKSYKLNWATHGNGGIKQIQNQPQSQPPHLQMHNQNPQMMNQGG 129
Query: 173 ----------DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVR 222
D I+VGDL +V D ML F +YPS AKV++D +T +KGYGFV+
Sbjct: 130 PGGAQQQQQGDFQIYVGDLDPNVNDQMLLNVFNKKYPSVTQAKVIVDPVTRYSKGYGFVK 189
Query: 223 FGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
FG + E AM EM G + +PM+I A
Sbjct: 190 FGSQEESQNAMVEMQGYYLFKKPMKINQAN 219
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 78/193 (40%), Gaps = 32/193 (16%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GD+ + D + F S + K++ D+L G GYGFV F +
Sbjct: 17 TLWIGDVEPWMDDAYISSLFSG-IASVQTVKLIRDKLKGTPVGYGFVEFPNHDVARNVYL 75
Query: 235 EMNGVFC--STRPMRIGPATNKKTVSASYQNS------QVAQSDDDPN------------ 274
+NG +T+ ++ AT+ QN + + +P
Sbjct: 76 TLNGSVIPGTTKSYKLNWATHGNGGIKQIQNQPQSQPPHLQMHNQNPQMMNQGGPGGAQQ 135
Query: 275 ----NTTVFVGNLDSIVTDEHLRELFS-QYGQLVHVKIPA------GKRCGFVQFADRSC 323
+ ++VG+LD V D+ L +F+ +Y + K+ K GFV+F +
Sbjct: 136 QQQGDFQIYVGDLDPNVNDQMLLNVFNKKYPSVTQAKVIVDPVTRYSKGYGFVKFGSQEE 195
Query: 324 AEEALRMLNGTQL 336
++ A+ + G L
Sbjct: 196 SQNAMVEMQGYYL 208
>gi|448107329|ref|XP_004205333.1| Piso0_003577 [Millerozyma farinosa CBS 7064]
gi|448110297|ref|XP_004201597.1| Piso0_003577 [Millerozyma farinosa CBS 7064]
gi|359382388|emb|CCE81225.1| Piso0_003577 [Millerozyma farinosa CBS 7064]
gi|359383153|emb|CCE80460.1| Piso0_003577 [Millerozyma farinosa CBS 7064]
Length = 460
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 155/319 (48%), Gaps = 39/319 (12%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQT-----GQIEGYGFIEFISRAGAE 137
LW+GDL+ DE + + GE +VK+I++K T + GY F+ F
Sbjct: 78 LWMGDLEPSWDEKTIKKIWQSFGESPTSVKIIKDKFTSGNNKARNVGYCFVSFPDSNTVA 137
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTP-----------DHTIFVGDLAADVT 186
LQ NG +P + +LNWAS ++D+ D++IFVGDL DV+
Sbjct: 138 SALQK-NGLQIPGSTKTLKLNWASGSNSLQQDNAKQGGRFSSKSQNDYSIFVGDLGMDVS 196
Query: 187 DYMLQETFRARYPS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
+ +L E+F YP K K++ID +T +KG+GFV+F Q +A+TEMNG +R
Sbjct: 197 ETLLFESFNRNYPGQIKQVKIMIDPVTKLSKGFGFVKFASPHSQQKALTEMNGYQVGSRS 256
Query: 246 MRIGPATNKKT------------VSASYQNSQVAQ------SDDDPNNTTVFVGNLDSIV 287
+R+G A+ VSAS Q+ Q DP NTT+ V L +
Sbjct: 257 IRVGMASGSNMSINQEKSPYPDGVSAS--QIQIPQYQPPLNHITDPENTTLRVDGLPANF 314
Query: 288 TDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
T + L F +G +VH I G ++F R+ AE+A+ +G L G ++++WG+
Sbjct: 315 TPDDLALHFINFGNIVHCHISPDHSFGLIKFLVRTDAEKAMLYAHGAILDGCRVKVTWGK 374
Query: 348 SPSNKQAQPDPNQWNAGYY 366
+ ++ Q + Q +Y
Sbjct: 375 NDTDSQDATNTTQNTTKHY 393
>gi|406861752|gb|EKD14805.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 495
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 144/305 (47%), Gaps = 30/305 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K + YGF+E+ A AER +Q
Sbjct: 89 RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNSKGFN-YGFVEYDDPAAAERAMQ 147
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 148 TLNGRRVHQAE--IRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 204
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D TGR++GYGFV F + + +A++ M+G + +R +R A K S S
Sbjct: 205 VSEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 264
Query: 261 YQNSQVAQSDDDPN-------------------------NTTVFVGNLDSIVTDEHLREL 295
Q + A TTV+VGNL T L L
Sbjct: 265 QQQAMSAMGMTSTTPFGHHHFPTHGVQSYDMIVQQTPAWQTTVYVGNLTPYTTQNDLIPL 324
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
F +G +V + A + FV+ A A+ L+G + G+ ++ SWG+ + Q
Sbjct: 325 FQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDKAPGQPG 384
Query: 356 PDPNQ 360
D +Q
Sbjct: 385 ADGSQ 389
>gi|268531322|ref|XP_002630787.1| Hypothetical protein CBG02484 [Caenorhabditis briggsae]
Length = 403
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 147/276 (53%), Gaps = 14/276 (5%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E RTL++G+L + E ++ T F G V KVI + G + Y F+EF A +
Sbjct: 40 EPRTLYVGNLDPSVSEDFIATLFNQIGSVTKTKVIHD---GANDPYAFVEFSDHGQASQA 96
Query: 140 LQTFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRAR 197
LQT N + + E ++NWA G + DT H +FVGDL+++V + L+E F
Sbjct: 97 LQTMNKRLLHDRE--MKVNWAVEPGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAF-IP 153
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ AKV+ D T ++KGYGFV + E RA+ +MNG + R +R AT K
Sbjct: 154 FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGD 213
Query: 258 SASYQNSQVAQSDDDPN-----NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 312
N D+ N NT+V+VGN+ ++ DE +R+ F+ YG++ V+I +
Sbjct: 214 QEKPSNYNEKSYDEVYNQTSGDNTSVYVGNIANLTEDE-IRQAFASYGRISEVRIFKMQG 272
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
FV+F +++ A +A+ +N +GGQ +R SWG++
Sbjct: 273 YAFVKFENKNAAAKAITEMNNQDVGGQMVRCSWGKT 308
>gi|226505614|ref|NP_001148740.1| LOC100282356 [Zea mays]
gi|195621754|gb|ACG32707.1| mRNA 3-UTR binding protein [Zea mays]
gi|224030425|gb|ACN34288.1| unknown [Zea mays]
gi|413921566|gb|AFW61498.1| mRNA 3-UTR binding protein [Zea mays]
Length = 449
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 153/299 (51%), Gaps = 35/299 (11%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E+ L F G V K+IR +++ +GF+++ R A
Sbjct: 69 PSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSS----FGFVDYYDRRSAA 124
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRA 196
+ T +G + Q ++NWA A +R+DT H IFVGDL+++V D L F A
Sbjct: 125 LAIMTLHGRHIYG--QAIKVNWAY--ASTQREDTSGHFHIFVGDLSSEVNDATLYACFSA 180
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA----- 251
YPS A+V+ D TGR++GYGFV F ++ E A+TEM G + +R +R A
Sbjct: 181 -YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNS 239
Query: 252 --------------TNKKTVSASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLR 293
TN + +++ SQ A S ++P N TTV+VGNL V + L
Sbjct: 240 EEKPETDNHNAVVLTNGSSTNSATDASQDAGSKENPENNPDCTTVYVGNLGHEVNRDELH 299
Query: 294 ELFSQY--GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
F G + +++ K GFV+++ A A++M NG + G++I+ SWG P+
Sbjct: 300 RHFYNLGVGAIEEIRVQQDKGFGFVRYSTHGEAALAIQMANGLVVRGKSIKCSWGNKPT 358
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 24/201 (11%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ +VT+ +L E F+ + G + +GFV + D
Sbjct: 68 DPSTCRSVYVGNVNPNVTESLLIEVFQ-----SAGLVERCKLIRKEKSSFGFVDYYDRRS 122
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ ++G + +++ A Y ++Q +D + +FVG+L S V
Sbjct: 123 AALAIMTLHGRHIYGQAIKVNWA---------YASTQ---REDTSGHFHIFVGDLSSEVN 170
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ + G FV F ++ AE A+ + G LG + IR
Sbjct: 171 DATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIR 230
Query: 343 LSWGRSPSNKQAQPDPNQWNA 363
+W + +N + +P+ + NA
Sbjct: 231 CNWA-TKTNSEEKPETDNHNA 250
>gi|452845910|gb|EME47843.1| hypothetical protein DOTSEDRAFT_167231 [Dothistroma septosporum
NZE10]
Length = 500
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 175/371 (47%), Gaps = 40/371 (10%)
Query: 8 AVPPPPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAA---APQ 64
++PP P +A Q +Q + PPP PS + +P P A+ + +P
Sbjct: 11 SLPPLPAGVAPGQTSFQNGSQGHMPPPPVPS---LTIPQNNNPAPTAVGEVDLSGILSPT 67
Query: 65 AAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG 124
+AG V ++ R L++G L + E L F TG V VK+I +K Q +G
Sbjct: 68 SAGGHV--RRAAPEPNKRALYVGGLDPRVTEDVLKQIFETTGHVQNVKIIPDKNF-QSKG 124
Query: 125 Y--GFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDL 181
Y GF+E+ AER +QT NG + +Q R+NWA ++DT +H IFVGDL
Sbjct: 125 YNYGFVEYDDPGAAERAMQTLNGRRV--HQQEIRVNWAYQSNTNTKEDTSNHFHIFVGDL 182
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
+ +V D +L + F A + + A+V+ D TGR++GYGFV + D E +A++ M+G +
Sbjct: 183 SNEVNDEVLLQAFSA-FGTVSEARVMWDMKTGRSRGYGFVAYRDRGEAEKALSSMDGEWL 241
Query: 242 STRPMRIGPATNKKTVSASYQN-------------------SQVAQSDDDPNN------T 276
+R +R A K S S Q +Q +QS + N T
Sbjct: 242 GSRAIRCNWANQKGQPSFSQQQAMAQMGMTPTTPYGHHTFPTQGSQSYEMVVNQTPQWQT 301
Query: 277 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQL 336
T +VGNL T L LF +G + + + + FV+ A A+ L+G +
Sbjct: 302 TCYVGNLTPYTTQNDLVPLFQNFGYVTETRFQSDRGFAFVKMDTHENAANAICQLSGYNV 361
Query: 337 GGQNIRLSWGR 347
G+ ++ SWG+
Sbjct: 362 NGRPLKCSWGK 372
>gi|302904116|ref|XP_003049006.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729940|gb|EEU43293.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 474
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 130/433 (30%), Positives = 190/433 (43%), Gaps = 62/433 (14%)
Query: 9 VPPPPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGV 68
+PPPP P A Q Q Q PPP + +P P A+ T + G+
Sbjct: 13 LPPPPEPNAGAQGFQGGQNGSQALPPPP-----LHIPQNTNPIPTAI--TSPRSGDQGGI 65
Query: 69 AVPPQQQG------QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQI 122
P G +P + R L++G L + E L F TG V VK+I +K +
Sbjct: 66 MSPTSAGGFRRAAPEPNK-RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNA-RG 123
Query: 123 EGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDL 181
YGF+E+ AER +QT NG + E R+NWA ++DT +H IFVGDL
Sbjct: 124 YNYGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNTSNKEDTSNHFHIFVGDL 181
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
+ +V D +L + F A + S A+V+ D TGR++GYGFV F D + +A++ M+G +
Sbjct: 182 SNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWL 240
Query: 242 STRPMRIGPATNKK---------------TVSASYQNSQ----------VAQSDDDPNNT 276
+R +R A K T + Y + Q V + T
Sbjct: 241 GSRAIRCNWANQKGQPSMAQQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQTPSWQT 300
Query: 277 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQL 336
T +VGNL T + LF +G +V + A + F++ A A+ +NG +
Sbjct: 301 TCYVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYNV 360
Query: 337 GGQNIRLSWGRSPS-NKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY------Y 389
G+ ++ SWG+ + N Q DP Q + A GY P P+ Y Y
Sbjct: 361 NGRPLKCSWGKDKTPNAQGGFDPAQPYSPQSAQAPGY---------PGTPTFYPQYGAQY 411
Query: 390 GGYPGYGNYQQPQ 402
GG P GNY PQ
Sbjct: 412 GGQP--GNYGGPQ 422
>gi|340905400|gb|EGS17768.1| putative polyadenylated RNA protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 485
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 162/338 (47%), Gaps = 38/338 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V +VK+I +K + YGF+E+ AER +Q
Sbjct: 93 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKNH-RGYNYGFVEYDDPGAAERAMQ 151
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 152 TLNGRRVHQNE--IRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLWQAFSA-FGS 208
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
A+V+ D TGR++GYGFV F + ++ +A++ M+G + +R +R A K
Sbjct: 209 ISEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIH 268
Query: 255 ---------KTVSASYQNSQV----AQSDDDPNN------TTVFVGNLDSIVTDEHLREL 295
T + Y + S D N TT +VGNL T L L
Sbjct: 269 QQQAMQQMGMTPTTPYGHHHFPTHGIHSYDMVVNQTPAWQTTCYVGNLTPYTTQNDLVPL 328
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG--RSPSNKQ 353
F +G +V ++ A + F++ A A+ LNG + G+ ++ SWG R+P++ Q
Sbjct: 329 FQNFGYVVECRMQADRGFAFIKMDSHENAAMAICQLNGYMVNGRPLKCSWGKDRNPNHHQ 388
Query: 354 AQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGG 391
Q DPN + QG + GY A P YGG
Sbjct: 389 -QFDPNHQYS-----PQGAQAPGYPGAPGAYPYNQYGG 420
>gi|255642249|gb|ACU21389.1| unknown [Glycine max]
Length = 452
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 150/295 (50%), Gaps = 35/295 (11%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + + L F G + K+IR +++ YGF+++ RA A +
Sbjct: 54 CRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYHDRASAALAI 109
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
T +G + Q ++NWA A R+DT H IFVGDL+ +VTD L F YP
Sbjct: 110 MTLHGRQLYG--QALKVNWAY--ANSSREDTSGHFNIFVGDLSPEVTDATLFACFSV-YP 164
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI-------GPAT 252
S A+V+ D TGR+KGYGFV F D + A+ +M G + R +R G ++
Sbjct: 165 SCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWATKGAGGSS 224
Query: 253 NKKTVSASYQNSQVAQS---------------DDDPNNTTVFVGNLDSIVTDEHLRELFS 297
N++ ++ S QN+ V + D++P+ TTV+VGNL VT L F
Sbjct: 225 NEEKINDS-QNAVVLTNGSSDGGQDNNNEDAPDNNPSYTTVYVGNLPHDVTQAELHCQFH 283
Query: 298 QYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
G V V++ K GFV++ A A++M NG + G+N++ SWG P+
Sbjct: 284 ALGAGVIEEVRVQRDKGFGFVRYNTHDEAALAIQMANGRLVRGKNMKCSWGSKPT 338
>gi|296815788|ref|XP_002848231.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Arthroderma otae CBS 113480]
gi|238841256|gb|EEQ30918.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Arthroderma otae CBS 113480]
Length = 507
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 144/294 (48%), Gaps = 32/294 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG--YGFIEFISRAGAERV 139
R L++G L + E L F TG V +VK+I +K Q +G YGFIE+ AER
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNF-QSKGLNYGFIEYDDPGAAERA 160
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A
Sbjct: 161 MQTLNGRRVHQSE--IRVNWAYQSNTASKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-C 217
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S A+V+ D TGR++GYGFV F D ++ +A++ M+G + +R +R A K S
Sbjct: 218 GSVSEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQKGQPS 277
Query: 259 ASYQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLR 293
S Q + A QS D P TT +VGNL T L
Sbjct: 278 ISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLI 337
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
LF +G +V + A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 338 PLFQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 391
>gi|429863469|gb|ELA37920.1| nuclear and cytoplasmic polyadenylated rna-binding protein pub1
[Colletotrichum gloeosporioides Nara gc5]
Length = 479
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 147/307 (47%), Gaps = 32/307 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K YGF+E+ AER +Q
Sbjct: 86 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYN-YGFVEYDDPGAAERAMQ 144
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 145 TLNGRRVHQSE--IRVNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSA-FGS 201
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D TGR++GYGFV F D + +A++ M+G + +R +R A K S +
Sbjct: 202 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 261
Query: 261 YQNS-------------------------QVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 295
Q + +V + TT +VGNL T + L
Sbjct: 262 QQQAMQAMGLTPTTPFGHHQFPAHGVASYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVPL 321
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG--RSPSNKQ 353
F +G +V + A + F++ A A+ +NG + G+ ++ SWG ++P+ +
Sbjct: 322 FQNFGYVVESRFQADRGFAFIKMDSHESAAMAICQMNGYNVNGRPLKCSWGKDKTPNPQS 381
Query: 354 AQPDPNQ 360
A DP+Q
Sbjct: 382 AGFDPSQ 388
>gi|432883111|ref|XP_004074210.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Oryzias
latipes]
Length = 305
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 108/177 (61%), Gaps = 8/177 (4%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ TLW+G+L +MDE ++ F+ GE VV V++IRNK TG GY F+E A AER
Sbjct: 1 MSTLWMGNLDSYMDEKFITRAFSTMGEQVVNVRIIRNKMTGGAMGYCFVEMSDEATAERC 60
Query: 140 LQTFNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
L+ NG +P N F+LN A+FG K++ P ++FVGDL +V D ML E F R
Sbjct: 61 LRKINGKSLPGANPPTRFKLNRATFG---KQEAGPMFSLFVGDLTPEVDDGMLYEFFYNR 117
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATN 253
YPS +G KVV+D + G +KG GFV+F DE Q RA+ E G ++P+R+ A N
Sbjct: 118 YPSCRGGKVVLDSM-GNSKGCGFVQFPDERLQKRALEECQGAMGLGSKPLRLSLAAN 173
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 106/244 (43%), Gaps = 38/244 (15%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKG-----AKVVIDRLTGRTKGYGFVRFGDESEQ 229
T+++G+L D + E F R ST G +++ +++TG GY FV DE+
Sbjct: 3 TLWMGNL-----DSYMDEKFITRAFSTMGEQVVNVRIIRNKMTGGAMGYCFVEMSDEATA 57
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTD 289
R + ++NG + P P T K A++ + ++FVG+L V D
Sbjct: 58 ERCLRKING---KSLP-GANPPTRFKLNRATFGKQEAGPM------FSLFVGDLTPEVDD 107
Query: 290 EHLRELF------SQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQ-LGGQNIR 342
L E F + G++V + K CGFVQF D + AL G LG + +R
Sbjct: 108 GMLYEFFYNRYPSCRGGKVVLDSMGNSKGCGFVQFPDERLQKRALEECQGAMGLGSKPLR 167
Query: 343 LSW-GRSPSNKQAQPDPNQ--W--NAGY-YGYAQGYENYGYAAAAP-----QDPSMYYGG 391
LS + NKQ Q + W ++GY Y Y+N Y P Q +MY
Sbjct: 168 LSLAANNLRNKQPQQSEQKQTWPSSSGYSYDQYNQYQNQAYPGYYPSWGYDQTAAMYGYS 227
Query: 392 YPGY 395
YP Y
Sbjct: 228 YPQY 231
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Query: 276 TTVFVGNLDSIVTDEHLRELFSQYG-QLVHVKIPAGKRCG------FVQFADRSCAEEAL 328
+T+++GNLDS + ++ + FS G Q+V+V+I K G FV+ +D + AE L
Sbjct: 2 STLWMGNLDSYMDEKFITRAFSTMGEQVVNVRIIRNKMTGGAMGYCFVEMSDEATAERCL 61
Query: 329 RMLNGTQLGGQN--IRLSWGRSPSNKQ 353
R +NG L G N R R+ KQ
Sbjct: 62 RKINGKSLPGANPPTRFKLNRATFGKQ 88
>gi|121701611|ref|XP_001269070.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
gi|119397213|gb|EAW07644.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
Length = 480
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 141/294 (47%), Gaps = 31/294 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERV 139
R L++G L + E L F TG V +VKVI +NK + YGF+EF AER
Sbjct: 92 RALYVGGLDPRVTEDILKQIFETTGHVQSVKVIPDKNKFNSKGYNYGFVEFDDPGAAERA 151
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + E R+NWA ++DT H IFVGDL+ +V D +L + F A +
Sbjct: 152 MQTLNGRRIHQSE--IRVNWAYQSNTTSKEDTSGHFHIFVGDLSNEVNDEILMQAFSA-F 208
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S A+V+ D TGR++GYGFV F D + +A+ M+G + +R +R A K S
Sbjct: 209 GSVSEARVMWDMKTGRSRGYGFVAFRDRGDADKALNSMDGEWLGSRAIRCNWANQKGQPS 268
Query: 259 ASYQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLR 293
S Q + A QS D P TT +VGNL L
Sbjct: 269 ISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTAQNDLV 328
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
LF +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 329 PLFQNFGYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 382
>gi|17531965|ref|NP_495121.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
gi|373219010|emb|CCD65015.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
Length = 408
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 150/283 (53%), Gaps = 28/283 (9%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E RTL++G+L + E ++ T F G V KVI + G + Y F+EF A +
Sbjct: 44 EPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQASQA 100
Query: 140 LQTFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRAR 197
LQT N + + E ++NWA G + + DT H +FVGDL+++V + L+E F+
Sbjct: 101 LQTMNKRLLLDRE--MKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQP- 157
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT----- 252
+ AKV+ D T ++KGYGFV + E RA+ +MNG + R +R AT
Sbjct: 158 FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGD 217
Query: 253 -------NKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 305
N+K+ Y + +NT+V+VGN+ S+ DE +R+ F+ +G++ V
Sbjct: 218 QEKPSHYNEKSYDEIYNQTS-------GDNTSVYVGNIASLTEDE-IRQGFASFGRITEV 269
Query: 306 KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
+I + FV+F ++ A +A+ +N +GGQ +R SWG++
Sbjct: 270 RIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGKT 312
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 32/187 (17%)
Query: 71 PPQQQGQPGEIRT--LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P QQQ + R +++GDL +D L F G+V KVIR+ T + +GYGF+
Sbjct: 122 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 181
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------- 174
+ R AER ++ NG + G + R NWA+ G++ + P H
Sbjct: 182 SYPKREEAERAIEQMNGQWL--GRRTIRTNWATRKPGDQ--EKPSHYNEKSYDEIYNQTS 237
Query: 175 ----TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+++VG++A+ +T+ +++ F A + ++ + +GY FV+F ++
Sbjct: 238 GDNTSVYVGNIAS-LTEDEIRQGF-ASFGRITEVRIF------KMQGYAFVKFDNKDAAA 289
Query: 231 RAMTEMN 237
+A+ +MN
Sbjct: 290 KAIVQMN 296
>gi|392869588|gb|EJB11873.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides immitis RS]
Length = 466
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/347 (32%), Positives = 165/347 (47%), Gaps = 39/347 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERV 139
R L++G L + E L F TG V +VK+I +N Q+ + YGF+E+ AER
Sbjct: 92 RALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNFQSKGLN-YGFVEYDDPGAAERA 150
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A +
Sbjct: 151 MQTLNGRRVHQSE--IRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 207
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S A+V+ D TGR++GYGFV F + ++ +A++ M+G + +R +R A K S
Sbjct: 208 GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPS 267
Query: 259 ASYQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLR 293
S Q + A QS D P TT +VGNL T L
Sbjct: 268 ISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLV 327
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS-PSNK 352
LF +G +V + A + FV+ A A+ LNG + G+ ++ SWG+ P
Sbjct: 328 PLFQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTG 387
Query: 353 QAQPDPNQ-----WNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPG 394
Q P Q +N+G +G++ G A P P YG PG
Sbjct: 388 QFDYSPQQGANPAFNSGPNPAGRGWDQSG-ANFGPGMPGQGYGQVPG 433
>gi|410927733|ref|XP_003977295.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Takifugu rubripes]
Length = 304
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 109/177 (61%), Gaps = 8/177 (4%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ TLW+G+L+ +MDE ++ F+ GE VV+V++IRNK TG GY F+E A AER
Sbjct: 1 MSTLWMGNLETYMDEKFITRAFSTMGEQVVSVRIIRNKMTGGALGYCFVEMTDEATAERC 60
Query: 140 LQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
L+ NG +P F+LN A+FG K+D +++FVGDL +V D ML E F R
Sbjct: 61 LRKINGKSLPGASPPTRFKLNRATFG---KQDVGQMYSLFVGDLTPEVDDGMLYEFFYNR 117
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATN 253
YPS +G KVV+D + G +KG GFV+F DE Q RA+ E G V ++ +R+ A N
Sbjct: 118 YPSCRGGKVVLDSM-GNSKGCGFVQFPDERLQKRALDECQGAVGLGSKALRLSLAAN 173
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++G+L + + + F +++ +++TG GY FV DE+ R +
Sbjct: 3 TLWMGNLETYMDEKFITRAFSTMGEQVVSVRIIRNKMTGGALGYCFVEMTDEATAERCLR 62
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
++NG + P P T K A++ V Q ++FVG+L V D L E
Sbjct: 63 KING---KSLP-GASPPTRFKLNRATFGKQDVGQM------YSLFVGDLTPEVDDGMLYE 112
Query: 295 LF------SQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWG- 346
F + G++V + K CGFVQF D + AL G LG + +RLS
Sbjct: 113 FFYNRYPSCRGGKVVLDSMGNSKGCGFVQFPDERLQKRALDECQGAVGLGSKALRLSLAA 172
Query: 347 ---RSPSNKQAQPDPNQWNAGYYGYAQGYENY 375
R+ +Q++ Q ++GY G Y Y
Sbjct: 173 NNLRNRQPQQSETRAAQPSSGYRGDYDQYSQY 204
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 276 TTVFVGNLDSIVTDEHLRELFSQYG-QLVHVKIPAGKRCG------FVQFADRSCAEEAL 328
+T+++GNL++ + ++ + FS G Q+V V+I K G FV+ D + AE L
Sbjct: 2 STLWMGNLETYMDEKFITRAFSTMGEQVVSVRIIRNKMTGGALGYCFVEMTDEATAERCL 61
Query: 329 RMLNGTQLGGQN--IRLSWGRSPSNKQ 353
R +NG L G + R R+ KQ
Sbjct: 62 RKINGKSLPGASPPTRFKLNRATFGKQ 88
>gi|452986364|gb|EME86120.1| hypothetical protein MYCFIDRAFT_52503 [Pseudocercospora fijiensis
CIRAD86]
Length = 482
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 162/348 (46%), Gaps = 47/348 (13%)
Query: 34 PPQPSPYMMMMPPQ-----PQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGD 88
PP P P + + PQ PQ+ M T A Q A P + R L++G
Sbjct: 36 PPPPVPSLAVNIPQNTNPLPQSMSGLMSPTSAGG-QVRRAAPEPNK-------RALYVGG 87
Query: 89 LQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGY--GFIEFISRAGAERVLQTFNGT 146
L + E L F TG V +VK+I +K Q +GY GF+E+ AER +QT NG
Sbjct: 88 LDPRVTEDVLKQIFETTGHVQSVKIIPDKNF-QSKGYNYGFVEYDDPGAAERAMQTLNGR 146
Query: 147 PMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAK 205
+ +Q R+NWA ++DT +H IFVGDL+ +V D +L + F A + + A+
Sbjct: 147 RV--HQQEIRVNWAYQSNTATKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGNVSEAR 203
Query: 206 VVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQ 265
V+ D TGR++GYGFV F D E +A++ M+G + +R +R A K S S Q +
Sbjct: 204 VMWDMKTGRSRGYGFVAFRDRGEAEKALSSMDGEWLGSRAIRCNWANQKGQPSFSQQQA- 262
Query: 266 VAQSDDDPNN--------------------------TTVFVGNLDSIVTDEHLRELFSQY 299
+AQ P TT +VGNL T L LF +
Sbjct: 263 MAQMGMTPTTPYGHHSFPTQGPQSYETIVSQTPQWQTTCYVGNLTPYTTQNDLVPLFQNF 322
Query: 300 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
G + + + + F++ A A+ L+G Q+ G+ ++ SWG+
Sbjct: 323 GYVTETRFQSDRGFAFIKMDSHENAANAICHLSGYQVNGRPLKCSWGK 370
>gi|347839348|emb|CCD53920.1| similar to nuclear and cytoplasmic polyadenylated RNA-binding
protein pub1 [Botryotinia fuckeliana]
Length = 506
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 148/309 (47%), Gaps = 33/309 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG----YGFIEFISRAGAE 137
R L++G L + E L F TG V VK+I +K G ++ YGF+E+ AE
Sbjct: 89 RALYVGGLDPRVTEEILRQIFETTGHVQNVKIIPDKNVGAVQSKGFNYGFVEYDDPGAAE 148
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRA 196
R +QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A
Sbjct: 149 RAMQTLNGRRVHQAE--IRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA 206
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+ S A+V+ D TGR++GYGF F + + +A++ M+G + +R +R A K
Sbjct: 207 -FGSVSEARVMWDMKTGRSRGYGFAAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQ 265
Query: 257 VSASYQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEH 291
S S Q + A QS D P TT +VGNL T +
Sbjct: 266 PSISQQQAMSAMGMTPTTPFGHHHFPTHGVQSYDMIVQQTPQWQTTCYVGNLTPYTTQQD 325
Query: 292 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 351
L LF +G +V + + + FV+ A A+ L+G + G+ ++ SWG+ +
Sbjct: 326 LVPLFQNFGYVVETRFQSDRGFAFVKMDSHENAALAICQLSGYNVNGRPLKCSWGKDKAP 385
Query: 352 KQAQPDPNQ 360
A D +Q
Sbjct: 386 TSAGFDGSQ 394
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 25/198 (12%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTG--RTKG--YGFVRFGDESEQLR 231
++VG L VT+ +L++ F + K++ D+ G ++KG YGFV + D R
Sbjct: 91 LYVGGLDPRVTEEILRQIFETT-GHVQNVKIIPDKNVGAVQSKGFNYGFVEYDDPGAAER 149
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEH 291
AM +NG +R V+ +YQ S + +D N+ +FVG+L + V DE
Sbjct: 150 AMQTLNGRRVHQAEIR---------VNWAYQ-SNTSNKEDTSNHFHIFVGDLSNEVNDEV 199
Query: 292 LRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 345
L + FS +G + ++ + GF F +R AE+AL ++G LG + IR +W
Sbjct: 200 LLQAFSAFGSVSEARVMWDMKTGRSRGYGFAAFRERQDAEKALSSMDGEWLGSRAIRCNW 259
Query: 346 GRSPSNKQAQPDPNQWNA 363
+N++ QP +Q A
Sbjct: 260 ----ANQKGQPSISQQQA 273
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 12/100 (12%)
Query: 266 VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC----------GF 315
V ++ +PN ++VG LD VT+E LR++F G + +VKI K GF
Sbjct: 79 VRRAAPEPNKRALYVGGLDPRVTEEILRQIFETTGHVQNVKIIPDKNVGAVQSKGFNYGF 138
Query: 316 VQFADRSCAEEALRMLNGTQLGGQNIRLSWG--RSPSNKQ 353
V++ D AE A++ LNG ++ IR++W + SNK+
Sbjct: 139 VEYDDPGAAERAMQTLNGRRVHQAEIRVNWAYQSNTSNKE 178
>gi|389639074|ref|XP_003717170.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Magnaporthe oryzae 70-15]
gi|351642989|gb|EHA50851.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Magnaporthe oryzae 70-15]
gi|440475727|gb|ELQ44390.1| nucleolysin TIA-1 [Magnaporthe oryzae Y34]
gi|440486439|gb|ELQ66302.1| nucleolysin TIA-1 [Magnaporthe oryzae P131]
Length = 479
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 35/387 (9%)
Query: 4 PAPGAVPPPPPPMAAHQYQYQQQAPPQQQP-PPQPSPYMMMMPPQPQAQPPAMWATQAAA 62
PAPG PPPP A + Q P P P P P A M +A
Sbjct: 7 PAPGTQLPPPPQANAGAPGFDNPQNGQSGPMAPPPLHIPQNTNPIPTAITSPMGGGDQSA 66
Query: 63 PQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQI 122
+ G + +P + R L++G L + E L F TG V VK+I +K
Sbjct: 67 LMSPGGTFTRRTAPEPNK-RALYVGGLDARVTEDVLRQIFETTGHVQNVKIIPDKNAKGY 125
Query: 123 EGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDTPDH-TIFVGD 180
YGF+E+ A+R +QT NG + E R+NWA A ++DT +H IFVGD
Sbjct: 126 N-YGFVEYDDPGAADRAMQTLNGRRVHQSE--IRVNWAYQAATSATKEDTSNHFHIFVGD 182
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L+ +V D +L + F + S A+V+ D TGR++GYGFV F D S+ +A++ M+G +
Sbjct: 183 LSNEVNDEVLTQAFSV-FGSVSEARVMWDMKTGRSRGYGFVAFRDRSDAEKALSSMDGEW 241
Query: 241 CSTRPMRIGPATNKKTVSASYQNSQVA-------------------QSDDDPNN------ 275
+R +R A K S + Q + A QS + N
Sbjct: 242 LGSRAIRCNWANQKGQPSIAQQQAMSAVGMTPTTPFGHHHFPTHGMQSYEMVVNQTPAYQ 301
Query: 276 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQ 335
TT +VGNL T + LF +G +V + A + F++ A +A+ LNG
Sbjct: 302 TTCYVGNLTPYTTANDVVPLFQNFGYVVESRFQADRGFAFIKMDSHENAAQAICGLNGYN 361
Query: 336 LGGQNIRLSWG--RSPSNKQAQPDPNQ 360
+ G+ ++ SWG ++ +N Q DP+Q
Sbjct: 362 VNGRPLKCSWGKDKNSTNPQGNFDPSQ 388
>gi|403335112|gb|EJY66726.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 588
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 108/204 (52%), Gaps = 27/204 (13%)
Query: 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE-----GYGFIEFISR 133
G +TLWIGD++ WMDE Y+ F +V+ +K+I+NK + GYGF+EF S
Sbjct: 96 GGSKTLWIGDIENWMDEQYVINLFQGIAQVMNIKLIKNKDNRKNSSAPQFGYGFVEFTSH 155
Query: 134 AGAERVLQTFNGTPMPNG-EQNFRLNWASFGAGEKRDD---------------------T 171
A+ + T NG +P+ +NF+LNWAS +
Sbjct: 156 EIAKSIFTTLNGASIPSLPNKNFKLNWASHQVAYNKTSYQNYQNNGHAQNYSNHQGSRKQ 215
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
++ I+VGDL +V D ML TF+ RYPS AKV++D +T ++K YGFV+FG E
Sbjct: 216 EEYQIYVGDLDPNVNDQMLMITFQKRYPSVNQAKVIMDPITRQSKCYGFVKFGIIEEGQN 275
Query: 232 AMTEMNGVFCSTRPMRIGPATNKK 255
AM EM G T+ M+I A+ KK
Sbjct: 276 AMAEMQGKLLLTKAMKINHASQKK 299
>gi|325089595|gb|EGC42905.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces capsulatus H88]
Length = 492
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 141/292 (48%), Gaps = 30/292 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L+IG L + E L F TG V +VK+I +K + + YGF+E+ AER +
Sbjct: 92 RALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSKGLN-YGFVEYDDPGAAERAMS 150
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 151 TLNGRRVHQSE--IRVNWAYQSNNNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 207
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D TGR++GYGFV F + + +A++ M+G + +R +R A K S S
Sbjct: 208 VSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 267
Query: 261 YQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLREL 295
Q + A QS D P TT +VGNL T L L
Sbjct: 268 QQQAMAAMGMTPSTPFGHHHFPTHGVQSYDMVAAQTPQWQTTCYVGNLTPYTTQNDLIPL 327
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
F +G +V + + FV+ A A+ L+G + G+ ++ SWGR
Sbjct: 328 FQNFGYVVETRFQTDRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGR 379
>gi|391330636|ref|XP_003739762.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 364
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 167/345 (48%), Gaps = 35/345 (10%)
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
PQ GQP RTL++G+L + E + F+ G++ K+I + + Y F+EF+
Sbjct: 6 PQDGGQP---RTLYVGNLDSGVTEDLVCALFSQMGQIKGCKIIHEPGS---DPYCFVEFV 59
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPD----HTIFVGDLAADVTD 187
+ + A + N E R+NWAS ++ PD H IFVGDL+ +
Sbjct: 60 NHSDASSAITAMNARMCLGRE--LRVNWASSAIQQQTPHRPDTSKHHHIFVGDLSPQIET 117
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
L+E F + + +VV D T ++KGYGFV F ++ + A+ M+G + +R +R
Sbjct: 118 SDLREAF-SPFGEISDCRVVKDATTQKSKGYGFVSFTNKQDAENAIHTMDGSWLGSRAIR 176
Query: 248 IGPAT---NKKTVSASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDE-HLRELFS 297
A+ N K + A + D+ P+N TV+ G L+ + + E LR+ F
Sbjct: 177 TNWASRKPNHKETGSYIGGHHRALNYDEVFAQSSPSNCTVYCGGLNQMASSEDFLRQAFD 236
Query: 298 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR--SPSNKQAQ 355
++G++V +++ K F++F + A A+ + + +GGQ ++ SWG+ P+ Q
Sbjct: 237 EFGEIVDIRLFKDKGYAFIKFNSKESACRAIVARHNSDIGGQAVKCSWGKEQEPAQPQFP 296
Query: 356 PDPNQWNAGYYGYAQ-------GYENYGYAAAAPQDPSMYYGGYP 393
DP Q N Y GY+ Y N YAAA YYG YP
Sbjct: 297 YDPYQMNYWYSGYSMDGNYMGGDYMNQMYAAAP---YGQYYGQYP 338
>gi|401887565|gb|EJT51549.1| non-translatable mRNA -binding protein [Trichosporon asahii var.
asahii CBS 2479]
gi|406699766|gb|EKD02963.1| non-translatable mRNA -binding protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 381
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 147/278 (52%), Gaps = 19/278 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L+IG++ + + L F+ G VV+ K+I RN G YGF+E+ AE+ L
Sbjct: 15 LYIGNMSPRVTDQMLAEIFSVAGPVVSAKIIQDRNFHHGGYN-YGFVEYTDMRSAEQALT 73
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G G + D +FVGDL+ +V D +L + F A++ S
Sbjct: 74 TLNGRKIFDSE--IRVNWAYQGQGNREDTQHHFHVFVGDLSPEVNDDILGKAF-AKFASL 130
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A N+KT +
Sbjct: 131 SEARVMWDMNSGKSRGYGFLSFRDKADAEQAIATMNGEWLGSRAIRVNWA-NQKTQTGGS 189
Query: 262 QNSQVAQSDDDP------------NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 309
++ + Q + P NTTV+VGNL T L LF YG +V +++ A
Sbjct: 190 RSLGLGQGFNGPLTFEQVAAQTPDYNTTVYVGNLIPYTTQADLIPLFQNYGYIVEIRMQA 249
Query: 310 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
+ FV+ + A ++ L + G+ I+ SWG+
Sbjct: 250 DRGFAFVKLDTHANAALSITSLQNQLVHGRPIKCSWGK 287
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGF 315
N+Q A++ P+ +++GN+ VTD+ L E+FS G +V KI G GF
Sbjct: 3 NNQAAEAPKKPH---LYIGNMSPRVTDQMLAEIFSVAGPVVSAKIIQDRNFHHGGYNYGF 59
Query: 316 VQFADRSCAEEALRMLNGTQLGGQNIRLSW 345
V++ D AE+AL LNG ++ IR++W
Sbjct: 60 VEYTDMRSAEQALTTLNGRKIFDSEIRVNW 89
>gi|119174082|ref|XP_001239402.1| hypothetical protein CIMG_09023 [Coccidioides immitis RS]
Length = 485
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 145/294 (49%), Gaps = 32/294 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERV 139
R L++G L + E L F TG V +VK+I +N Q+ + YGF+E+ AER
Sbjct: 92 RALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNFQSKGLN-YGFVEYDDPGAAERA 150
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A +
Sbjct: 151 MQTLNGRRVHQSE--IRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 207
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S A+V+ D TGR++GYGFV F + ++ +A++ M+G + +R +R A K S
Sbjct: 208 GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPS 267
Query: 259 ASYQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLR 293
S Q + A QS D P TT +VGNL T L
Sbjct: 268 ISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLV 327
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
LF +G +V + A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 328 PLFQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 381
>gi|209735818|gb|ACI68778.1| tRNA selenocysteine-associated protein 1 [Salmo salar]
gi|303668652|gb|ADM16309.1| tRNA selenocysteine-associated protein 1 SECp43 [Salmo salar]
Length = 301
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 112/178 (62%), Gaps = 7/178 (3%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ TLW+G+L+ +MDE ++ F GE VV+V++IRNK TG GY F+E A AER
Sbjct: 1 MSTLWMGNLEPYMDENFITRAFGTMGELVVSVRIIRNKMTGGAAGYCFVELTDEATAERC 60
Query: 140 LQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
L+ NG +P + F+LN A+FG ++ + +P +++FVGDL +V D ML E F R
Sbjct: 61 LRKVNGKALPGATPPRRFKLNRATFG--KQGESSPLYSLFVGDLTPEVDDGMLYEFFYNR 118
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
YPS +G KVV+D TG +KG GFV+F D+ Q A+ E G V ++P+R+ A NK
Sbjct: 119 YPSCRGGKVVLDG-TGNSKGCGFVQFPDQRLQKLALEECQGAVGLGSKPLRLSLAANK 175
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++G+L + + + F +++ +++TG GY FV DE+ R +
Sbjct: 3 TLWMGNLEPYMDENFITRAFGTMGELVVSVRIIRNKMTGGAAGYCFVELTDEATAERCLR 62
Query: 235 EMNGVFC--STRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 292
++NG +T P R N+ T ++S + ++FVG+L V D L
Sbjct: 63 KVNGKALPGATPPRRF--KLNRATFGKQGESSPL---------YSLFVGDLTPEVDDGML 111
Query: 293 RELF------SQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSW 345
E F + G++V K CGFVQF D+ + AL G LG + +RLS
Sbjct: 112 YEFFYNRYPSCRGGKVVLDGTGNSKGCGFVQFPDQRLQKLALEECQGAVGLGSKPLRLSL 171
Query: 346 GRSPSNKQAQPDPNQWNAGYYGY 368
+ + + Q D W + GY
Sbjct: 172 AANKT-RHNQSDNRGWGSHGGGY 193
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 276 TTVFVGNLDSIVTDEHLRELFSQYGQLV-HVKIPAGKRCG------FVQFADRSCAEEAL 328
+T+++GNL+ + + + F G+LV V+I K G FV+ D + AE L
Sbjct: 2 STLWMGNLEPYMDENFITRAFGTMGELVVSVRIIRNKMTGGAAGYCFVELTDEATAERCL 61
Query: 329 RMLNGTQLGGQN--IRLSWGRSPSNKQAQPDP 358
R +NG L G R R+ KQ + P
Sbjct: 62 RKVNGKALPGATPPRRFKLNRATFGKQGESSP 93
>gi|119495558|ref|XP_001264561.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
gi|119412723|gb|EAW22664.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
Length = 477
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 142/293 (48%), Gaps = 30/293 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ-TGQIEGYGFIEFISRAGAERVL 140
R L++G L + E L F TG V +VK+I +K + YGF+EF AER +
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFNSKGYNYGFVEFDDPGAAERAM 150
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
QT NG + E R+NWA ++DT H IFVGDL+ +V D +L + F A +
Sbjct: 151 QTLNGRRIHQSE--IRVNWAYQSNSTNKEDTSSHFHIFVGDLSNEVNDEILLQAFSA-FG 207
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S A+V+ D TGR++GYGFV F + ++ +A+ M+G + +R +R A K S
Sbjct: 208 SVSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQKGQPSI 267
Query: 260 SYQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLRE 294
S Q + A QS D P TT +VGNL T L
Sbjct: 268 SQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVP 327
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
LF +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 328 LFHNFGYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 380
>gi|341900388|gb|EGT56323.1| CBN-TIAR-1 protein [Caenorhabditis brenneri]
Length = 399
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 153/276 (55%), Gaps = 14/276 (5%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E RTL++G+L + E ++ T F G V KVI + G + Y F+EF A A +
Sbjct: 40 EPRTLYVGNLDPTVSEDFVATLFNQIGSVTKTKVIFD---GANDPYAFVEFSDHAQASQA 96
Query: 140 LQTFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRAR 197
LQT N + + E ++NWA G + DT H +FVGDL+++V + L+E F+
Sbjct: 97 LQTMNKRLLLDRE--MKVNWAVEPGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAFQP- 153
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--- 254
+ AKV+ D T ++KGYGFV + E RA+ +MNG + R +R AT K
Sbjct: 154 FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGD 213
Query: 255 --KTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 312
K V + ++ + +NT+V+VGN+ ++ ++E +R+ F+ YG++ V+I +
Sbjct: 214 QEKPVHYNEKSYDEIYNQTSGDNTSVYVGNIANL-SEEDIRQAFASYGRISEVRIFKMQG 272
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
FV+F ++ A +A+ +N ++GGQ +R SWG++
Sbjct: 273 YAFVKFDNKDAAAKAIVQMNNQEVGGQLVRCSWGKT 308
>gi|367051094|ref|XP_003655926.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
gi|347003190|gb|AEO69590.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
Length = 500
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 148/306 (48%), Gaps = 31/306 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V +VK+I +K + YGF+E+ AER +Q
Sbjct: 90 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKNA-RGYNYGFVEYDDPGAAERAMQ 148
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 149 TLNGRRVHQSE--IRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 205
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK----- 255
A+V+ D TGR++GYGFV F + ++ +A++ M+G + +R +R A K
Sbjct: 206 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 265
Query: 256 ----------TVSASYQNSQV----AQSDDDPNN------TTVFVGNLDSIVTDEHLREL 295
T + Y + S D N TT +VGNL T + L
Sbjct: 266 QQQAMQQMGLTPTTPYGHHHFPTHGIHSYDMIVNQTPAWQTTCYVGNLTPYTTQNDIVPL 325
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
F +G +V + A + FV+ A A+ LNG + G+ ++ SWG+ + Q
Sbjct: 326 FQNFGFVVESRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDKTPAHHQ 385
Query: 356 P-DPNQ 360
P DPNQ
Sbjct: 386 PFDPNQ 391
>gi|223948725|gb|ACN28446.1| unknown [Zea mays]
gi|414869520|tpg|DAA48077.1| TPA: mRNA 3-UTR binding protein [Zea mays]
Length = 446
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 150/299 (50%), Gaps = 35/299 (11%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E+ L F G V K+IR +++ +GF+++ R A
Sbjct: 67 PSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSS----FGFVDYYDRRSAA 122
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRA 196
+ T +G + Q ++NWA A +R+DT H IFVGDL+++V D L F A
Sbjct: 123 LAIMTLHGRHVYG--QAIKVNWAY--ASTQREDTSGHFHIFVGDLSSEVNDATLYACFSA 178
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
YPS A+V+ D TGR++GYGFV F ++ E A+TEM G + +R +R AT +
Sbjct: 179 -YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNS 237
Query: 257 --------------VSASYQNSQVAQSDD---------DPNNTTVFVGNLDSIVTDEHLR 293
+ S NS S D +P+ TTV+VGNL V + L
Sbjct: 238 EEKPETDNHNAVVLTNGSSNNSATDASQDAGSKEPPQNNPDCTTVYVGNLGHEVNRDELH 297
Query: 294 ELFSQY--GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
F G + V++ K GFV+++ A A++M NG+ + G+ I+ SWG P+
Sbjct: 298 RHFYNLGVGAIEEVRVQQDKGFGFVRYSTHGEAALAIQMSNGSVVRGKPIKCSWGVKPT 356
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 24/201 (11%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ +VT+ +L E F+ + G + +GFV + D
Sbjct: 66 DPSTCRSVYVGNVNPNVTESLLIEVFQ-----SAGLVERCKLIRKEKSSFGFVDYYDRRS 120
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ ++G + +++ A Y ++Q +D + +FVG+L S V
Sbjct: 121 AALAIMTLHGRHVYGQAIKVNWA---------YASTQ---REDTSGHFHIFVGDLSSEVN 168
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ + G FV F ++ AE A+ + G LG + IR
Sbjct: 169 DATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIR 228
Query: 343 LSWGRSPSNKQAQPDPNQWNA 363
+W + +N + +P+ + NA
Sbjct: 229 CNWA-TKNNSEEKPETDNHNA 248
>gi|380478106|emb|CCF43782.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 482
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 145/310 (46%), Gaps = 35/310 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K + YGF+E+ AER +Q
Sbjct: 87 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNA-KGYNYGFVEYDDPGAAERAMQ 145
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 146 TLNGRRVHQSE--IRVNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEILTQAFSA-FGS 202
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D TGR++GYGFV F D + +A++ M+G + +R +R A K S +
Sbjct: 203 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 262
Query: 261 YQNS-------------------------QVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 295
Q + +V + TT +VGNL T + L
Sbjct: 263 QQQAMQAMGLTPTTPFGHHQFPAHGVASYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVPL 322
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
F +G +V + A + F++ A A+ +NG + G+ ++ SWG K
Sbjct: 323 FQNFGYVVESRFQADRGFAFIKMDSHESAAMAICQMNGYNVNGRPLKCSWG-----KDKT 377
Query: 356 PDPNQWNAGY 365
P+P AG+
Sbjct: 378 PNPQGGAAGF 387
>gi|310798412|gb|EFQ33305.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 482
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 145/310 (46%), Gaps = 35/310 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K + YGF+E+ AER +Q
Sbjct: 87 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNA-KGYNYGFVEYDDPGAAERAMQ 145
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 146 TLNGRRVHQSE--IRVNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEILTQAFSA-FGS 202
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D TGR++GYGFV F D + +A++ M+G + +R +R A K S +
Sbjct: 203 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 262
Query: 261 YQNS-------------------------QVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 295
Q + +V + TT +VGNL T + L
Sbjct: 263 QQQAMQAMGLTPTTPFGHHQFPAHGVASYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVPL 322
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
F +G +V + A + F++ A A+ +NG + G+ ++ SWG K
Sbjct: 323 FQNFGYVVESRFQADRGFAFIKMDSHESAAMAICQMNGYNVNGRPLKCSWG-----KDKT 377
Query: 356 PDPNQWNAGY 365
P+P AG+
Sbjct: 378 PNPQGGAAGF 387
>gi|344302744|gb|EGW33018.1| hypothetical protein SPAPADRAFT_60343 [Spathaspora passalidarum
NRRL Y-27907]
Length = 457
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 154/293 (52%), Gaps = 32/293 (10%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+GDL E ++ +A E V+VK+IR+K GY F+ F ++ + +Q
Sbjct: 91 LWMGDLDSNWTEEAIDYIWASLVEKPVSVKIIRDKLNPTKPGYCFVTFNNQKSVDLAMQR 150
Query: 143 FNGTPMPNGEQNFRLNWASFG---------AGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
NG P+P+ + F+LN+AS G A D + D ++FVGDL +V++ +L
Sbjct: 151 -NGQPVPSSNKYFKLNYASGGGHGGGQSRHAASGGDSSNDFSMFVGDLGHEVSEALLFNK 209
Query: 194 FRARYPS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG--- 249
F +YP+ K KV+ID T ++KG+GFVRF + RA+ EMNGV ++ +R+G
Sbjct: 210 FNHKYPNQIKHVKVIIDPTTKKSKGFGFVRFLNGEALNRALQEMNGVEIGSKAIRVGLAS 269
Query: 250 ---------PATNKKTVSASYQNSQVAQSDDDPN------NTTVFVGNLDSIVTDEHLRE 294
P +++ TV Y+ V Q D N NT++ + L S T+ L
Sbjct: 270 GASVDIQKGPTSSQGTVD--YRRVVVPQPQPDLNQYTDYDNTSLVIKGLASKFTERELEM 327
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
F +G L+H K+ + + G++++ RS AE A+ ++G+ + + ++WG+
Sbjct: 328 YFIGFGDLIHCKLSSDFQTGYIKYYLRSSAESAILYMHGSTINDCRLTINWGK 380
>gi|41581275|emb|CAE47924.1| oligouridylate binding protein, putative [Aspergillus fumigatus]
Length = 485
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 142/293 (48%), Gaps = 30/293 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ-TGQIEGYGFIEFISRAGAERVL 140
R L++G L + E L F TG V +VK+I +K + YGF+EF AER +
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFNSKGYNYGFVEFDDPGAAERAM 150
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
QT NG + E R+NWA ++DT H IFVGDL+ +V D +L + F A +
Sbjct: 151 QTLNGRRIHQSE--IRVNWAYQSNSANKEDTSSHFHIFVGDLSNEVNDEILLQAFSA-FG 207
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S A+V+ D TGR++GYGFV F + ++ +A+ M+G + +R +R A K S
Sbjct: 208 SVSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQKGQPSI 267
Query: 260 SYQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLRE 294
S Q + A QS D P TT +VGNL T L
Sbjct: 268 SQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVP 327
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
LF +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 328 LFHNFGYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 380
>gi|327357360|gb|EGE86217.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces dermatitidis ATCC 18188]
Length = 492
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 142/292 (48%), Gaps = 30/292 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L+IG L + E L F TG V +VK+I +K + + YGF+E+ AER +
Sbjct: 92 RALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSKGLN-YGFVEYDDPGAAERAMA 150
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 151 TLNGRRVHQSE--IRVNWAYQSNNSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 207
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D TGR++GYGFV F + + +A++ M+G + +R +R A K S S
Sbjct: 208 VSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 267
Query: 261 YQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLREL 295
Q + A QS D P TT +VGNL T L L
Sbjct: 268 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVAAQTPQWQTTCYVGNLTPYTTQNDLIPL 327
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
F +G +V + A + FV+ A A+ L+G + G+ ++ SWG+
Sbjct: 328 FQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGK 379
>gi|356559021|ref|XP_003547800.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 416
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 151/295 (51%), Gaps = 30/295 (10%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L FA TG V A K+IR ++ YGFI + R A
Sbjct: 49 PSTCRSVYVGNIHTQVTEPLLQEVFAGTGPVEACKLIRKDKSS----YGFIHYFDRRSAA 104
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ + NG + Q ++NWA + +G++ D + + IFVGDL+ +VTD L F
Sbjct: 105 LAILSLNGRHLFG--QPIKVNWA-YASGQREDTSGHYNIFVGDLSPEVTDATLFACFSV- 160
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN---- 253
YP+ A+V+ D+ TGR++G+GFV F ++ + A+ ++ G + +R +R AT
Sbjct: 161 YPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGG 220
Query: 254 ---------KKTVSASYQNS---QVAQSDDDPNN---TTVFVGNLDSIVTDEHLRELFSQ 298
K V +Y +S + + SD NN TTV+VGNL T L F
Sbjct: 221 TEEKQNSDAKSVVELTYGSSDGKETSNSDAPENNPQYTTVYVGNLAPEATQLDLHHHFHS 280
Query: 299 YGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 350
G V V++ K GFV+++ + A A++M N + L G+ I+ SWG P+
Sbjct: 281 LGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNAQSLLCGKQIKCSWGSKPT 335
>gi|242806685|ref|XP_002484795.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces stipitatus ATCC 10500]
gi|218715420|gb|EED14842.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces stipitatus ATCC 10500]
Length = 482
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 174/378 (46%), Gaps = 48/378 (12%)
Query: 9 VPPPPPPMAAHQYQYQ--------QQAPPQQQPPPQPSPYMMMMPPQPQAQPPAM---WA 57
+PPPP P A Q Q Q QPP P +++P + P A+ +
Sbjct: 13 LPPPPQPSAGAPGQPQFDSAQGNGQGTGAHMQPPSLPP---VVIPQKTNPIPTAITSPMS 69
Query: 58 TQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK 117
Q +P +AG V ++ R L+IG L + E L F TG V +VK+I +K
Sbjct: 70 GQMMSPTSAGGFV--RRAAPEPNKRALYIGGLDARVTEDILKQIFETTGHVQSVKIIPDK 127
Query: 118 QTGQIEG--YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH- 174
Q +G YGF+E+ AER +QT NG + E R+NWA ++DT +H
Sbjct: 128 NF-QSKGMNYGFVEYDDPGAAERAMQTLNGRRIHQSE--IRVNWAYQSNNSHKEDTSNHF 184
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
IFVGDL+ +V D +L + F A + S A+V+ D TGR++GYGFV F + + +A+
Sbjct: 185 HIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFREFEDAEKALK 243
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQS---------DDDPNN---------- 275
M+ + +R +R A K S S Q + A P +
Sbjct: 244 SMDREWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPSAPFGHHHFPTHGANSYDMVVA 303
Query: 276 ------TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALR 329
TT +VGNL T L LF +G +V ++ A + F++ A A+
Sbjct: 304 QTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRLQADRGFAFLKMDTHENAAMAIC 363
Query: 330 MLNGTQLGGQNIRLSWGR 347
LNG Q+ G+ ++ SWG+
Sbjct: 364 QLNGYQVNGRPLKCSWGK 381
>gi|308493359|ref|XP_003108869.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
gi|308247426|gb|EFO91378.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
Length = 404
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 151/276 (54%), Gaps = 14/276 (5%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E RTL++G+L + E + T F G V KVI + G + Y F+EF+ + A +
Sbjct: 42 EPRTLYVGNLDPSVSEDLIATLFNQIGSVTKTKVIFD---GANDPYAFVEFLDHSQASQA 98
Query: 140 LQTFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRAR 197
LQT N + + E ++NWA G + DT H +FVGDL+++V + L+E F+
Sbjct: 99 LQTMNKRLLLDRE--MKVNWAVEPGQQPSKVDTTRHFHVFVGDLSSEVDNQKLREAFQP- 155
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--- 254
+ AKV+ D T ++KGYGFV + E RA+ +MNG + R +R AT K
Sbjct: 156 FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGD 215
Query: 255 --KTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 312
K + ++ + +NT+V+VGN+ ++ DE +R+ F+ YG++ V+I +
Sbjct: 216 QEKPTHYNEKSFDEIYNQTSGDNTSVYVGNIANLSEDE-IRQAFASYGRISEVRIFKMQG 274
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
FV+F ++ A +A+ +N ++GGQ +R SWG++
Sbjct: 275 YAFVKFDNKDAAAKAIVQMNNQEVGGQLVRCSWGKT 310
>gi|225682885|gb|EEH21169.1| nucleolysin TIA-1 [Paracoccidioides brasiliensis Pb03]
Length = 471
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 166/348 (47%), Gaps = 37/348 (10%)
Query: 29 PQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAA---APQAAGVAVPPQQQGQPGEIRTLW 85
P PPP +P +++P P A+ + + +P +AG V ++ R L+
Sbjct: 48 PSHMPPPPLAP--VVIPQNTNPIPTAITSPMSGNMMSPTSAGGFV--RRAAPEPNKRALY 103
Query: 86 IGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNG 145
+G L + E L F TG V +VK+I +K + + YGF+E+ AER + T NG
Sbjct: 104 VGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNSKGLN-YGFVEYDDPGAAERAMATLNG 162
Query: 146 TPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGA 204
+ E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S A
Sbjct: 163 RRVHQSE--IRVNWAYQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEA 219
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNS 264
+V+ D TGR++GYGFV F + S+ +A++ M+G + +R +R A K S S Q +
Sbjct: 220 RVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQA 279
Query: 265 QVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLRELFSQY 299
A QS D P TT +VGNL T L LF +
Sbjct: 280 MAAMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLVPLFQNF 339
Query: 300 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
G +V + A + FV+ A A+ L+G + G+ ++ SWG+
Sbjct: 340 GYVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGK 387
>gi|115477340|ref|NP_001062266.1| Os08g0520300 [Oryza sativa Japonica Group]
gi|42408523|dbj|BAD09702.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|42409171|dbj|BAD10437.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|113624235|dbj|BAF24180.1| Os08g0520300 [Oryza sativa Japonica Group]
gi|215697677|dbj|BAG91671.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640879|gb|EEE69011.1| hypothetical protein OsJ_27962 [Oryza sativa Japonica Group]
Length = 447
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 152/299 (50%), Gaps = 35/299 (11%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E+ L F +G V K+IR +++ +GF+++ R A
Sbjct: 69 PSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSS----FGFVDYYDRRSAA 124
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRA 196
+ T +G + Q ++NWA A +R+DT H IFVGDL+++V D L F A
Sbjct: 125 LAIMTLHGRHICG--QAIKVNWAY--ASTQREDTSGHFHIFVGDLSSEVNDATLYACFSA 180
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA----- 251
YPS A+V+ D TGR++GYGFV F ++ E A+TEM G + +R +R A
Sbjct: 181 -YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNA 239
Query: 252 --------------TNKKTVSASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLR 293
TN + + + SQ S ++P N TTV+VGNL V + L
Sbjct: 240 EEKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELH 299
Query: 294 ELFSQY--GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
F G + V++ K GFV++++ A A++M NG + G+ I+ SWG P+
Sbjct: 300 RHFYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMANGLVVRGKPIKCSWGNKPT 358
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 84/198 (42%), Gaps = 23/198 (11%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ +VT+ +L E F+ + G + +GFV + D
Sbjct: 68 DPSTCRSVYVGNVHPNVTESLLIEVFQ-----SSGLVERCKLIRKEKSSFGFVDYYDRRS 122
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ ++G + +++ A Y ++Q +D + +FVG+L S V
Sbjct: 123 AALAIMTLHGRHICGQAIKVNWA---------YASTQ---REDTSGHFHIFVGDLSSEVN 170
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ + G FV F ++ AE A+ + G LG + IR
Sbjct: 171 DATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIR 230
Query: 343 LSWGRSPSNKQAQPDPNQ 360
+W + ++ Q N
Sbjct: 231 CNWATKNNAEEKQETDNH 248
>gi|326480772|gb|EGE04782.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton equinum CBS 127.97]
Length = 507
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 143/294 (48%), Gaps = 32/294 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG--YGFIEFISRAGAERV 139
R L++G L + E L F TG V +VK+I +K Q +G YGFIE+ AER
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNF-QSKGLNYGFIEYDDPGAAERA 160
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + E R+NWA ++DT H IFVGDL+ +V D +L + F A
Sbjct: 161 MQTLNGRRVHQSE--IRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSA-C 217
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S A+V+ D TGR++GYGFV F + ++ +A++ M+G + +R +R A K S
Sbjct: 218 GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPS 277
Query: 259 ASYQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLR 293
S Q + A QS D P TT +VGNL T L
Sbjct: 278 ISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLI 337
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
LF +G +V + A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 338 PLFQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 391
>gi|327299776|ref|XP_003234581.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
gi|326463475|gb|EGD88928.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
Length = 507
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 143/294 (48%), Gaps = 32/294 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG--YGFIEFISRAGAERV 139
R L++G L + E L F TG V +VK+I +K Q +G YGFIE+ AER
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNF-QSKGLNYGFIEYDDPGAAERA 160
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + E R+NWA ++DT H IFVGDL+ +V D +L + F A
Sbjct: 161 MQTLNGRRVHQSE--IRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSA-C 217
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S A+V+ D TGR++GYGFV F + ++ +A++ M+G + +R +R A K S
Sbjct: 218 GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPS 277
Query: 259 ASYQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLR 293
S Q + A QS D P TT +VGNL T L
Sbjct: 278 ISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLI 337
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
LF +G +V + A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 338 PLFQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 391
>gi|15221031|ref|NP_175810.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
gi|4587549|gb|AAD25780.1|AC006577_16 Similar to gb|U55861 RNA binding protein nucleolysin (TIAR) from
Mus musculus and contains several PF|00076 RNA
recognition motif domains. ESTs gb|T21032 and gb|T44127
come from this gene [Arabidopsis thaliana]
gi|13194792|gb|AAK15558.1|AF348587_1 putative oligouridylate binding protein [Arabidopsis thaliana]
gi|13605627|gb|AAK32807.1|AF361639_1 At1g54080/F15I1_16 [Arabidopsis thaliana]
gi|22137190|gb|AAM91440.1| At1g54080/F15I1_16 [Arabidopsis thaliana]
gi|332194924|gb|AEE33045.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
Length = 426
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 155/317 (48%), Gaps = 41/317 (12%)
Query: 67 GVAVPPQQQ----------GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRN 116
GV PPQ + P R+++ G++ + E L FA TG + + K+IR
Sbjct: 38 GVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRK 97
Query: 117 KQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTI 176
++ YGF+ + R A + T NG + Q ++NWA + G++ D + I
Sbjct: 98 DKSS----YGFVHYFDRRCASMAIMTLNGRHIFG--QPMKVNWA-YATGQREDTSSHFNI 150
Query: 177 FVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM 236
FVGDL+ +VTD L ++F A + S A+V+ D+ TGR++G+GFV F ++ + A+ EM
Sbjct: 151 FVGDLSPEVTDAALFDSFSA-FNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 209
Query: 237 NGVFCSTRPMRIGPATNKKT----------------VSASYQNSQVAQSDDDPNN----T 276
NG + S+R +R AT T + S ++ + ++D P N T
Sbjct: 210 NGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAPENNPQFT 269
Query: 277 TVFVGNLDSIVTDEHLRELFSQYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGT 334
TV+VGNL VT L LF G V V++ K GFV++ A A++M N
Sbjct: 270 TVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGFVRYNTHDEAALAIQMGNAQ 329
Query: 335 -QLGGQNIRLSWGRSPS 350
L + IR SWG P+
Sbjct: 330 PFLFSRQIRCSWGNKPT 346
>gi|315052890|ref|XP_003175819.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
gi|311341134|gb|EFR00337.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
Length = 506
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 143/297 (48%), Gaps = 34/297 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTG---QIEG--YGFIEFISRAGA 136
R L++G L + E L F TG V +VK+I +K Q +G YGFIE+ A
Sbjct: 97 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNASAQFQSKGLNYGFIEYDDPGAA 156
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFR 195
ER +QT NG + E R+NWA ++DT H IFVGDL+ +V D +L + F
Sbjct: 157 ERAMQTLNGRRVHQSE--IRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFS 214
Query: 196 ARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255
A S A+V+ D TGR++GYGFV F + ++ +A++ M+G + +R +R A K
Sbjct: 215 A-CGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKG 273
Query: 256 TVSASYQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDE 290
S S Q + A QS D P TT +VGNL T
Sbjct: 274 QPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQN 333
Query: 291 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
L LF +G +V + A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 334 DLIPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 390
>gi|242082185|ref|XP_002445861.1| hypothetical protein SORBIDRAFT_07g027050 [Sorghum bicolor]
gi|241942211|gb|EES15356.1| hypothetical protein SORBIDRAFT_07g027050 [Sorghum bicolor]
Length = 447
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 151/299 (50%), Gaps = 35/299 (11%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E+ L F G V K+IR +++ +GF+++ R A
Sbjct: 67 PSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSS----FGFVDYYDRRSAA 122
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRA 196
+ T +G + Q ++NWA A +R+DT H IFVGDL+++V D L F A
Sbjct: 123 LAIMTLHGRHIYG--QAIKVNWAY--ASTQREDTSGHFHIFVGDLSSEVNDATLYACFSA 178
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
YPS A+V+ D TGR++GYGFV F ++ E A+TEM G + +R +R AT +
Sbjct: 179 -YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNS 237
Query: 257 --------------VSASYQNSQVAQSDD---------DPNNTTVFVGNLDSIVT-DEHL 292
+ S NS S D +P+ TTV+VGNL V DE
Sbjct: 238 EEKPETDNHNAVVLTNGSSSNSATDASQDGGSKENPENNPDCTTVYVGNLGHEVNRDELH 297
Query: 293 RELFSQ-YGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
R +S G + +++ K GFV+++ A A++M NG + G+ I+ SWG P+
Sbjct: 298 RHFYSLGVGAIEEIRVQQDKGFGFVRYSTHGEAALAIQMGNGLVVRGKPIKCSWGNKPT 356
>gi|156058654|ref|XP_001595250.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980]
gi|154701126|gb|EDO00865.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 501
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 146/305 (47%), Gaps = 30/305 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K + YGF+E+ AER +Q
Sbjct: 89 RALYVGGLDPRVTEEVLRQIFETTGHVQNVKIIPDKNSKGFN-YGFVEYDDPGAAERAMQ 147
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 148 TLNGRRVHQAE--IRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 204
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D TGR++GYGF F + + +A++ M+G + +R +R A K S S
Sbjct: 205 VSEARVMWDMKTGRSRGYGFAAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 264
Query: 261 YQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLREL 295
Q + A QS D P TT +VGNL T + L L
Sbjct: 265 QQQAMSAMGMTPTTPFGHHHFPTHGVQSYDMIVQQTPQWQTTCYVGNLTPYTTQQDLVPL 324
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
F +G +V + A + FV+ A A+ L+G + G+ ++ SWG+ + A
Sbjct: 325 FQNFGYVVETRFQADRGFAFVKMDSHENAALAICQLSGYNVNGRPLKCSWGKDKAPTSAG 384
Query: 356 PDPNQ 360
D +Q
Sbjct: 385 FDGSQ 389
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 26/196 (13%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKG--YGFVRFGDESEQLRAM 233
++VG L VT+ +L++ F + K++ D+ +KG YGFV + D RAM
Sbjct: 91 LYVGGLDPRVTEEVLRQIFETT-GHVQNVKIIPDK---NSKGFNYGFVEYDDPGAAERAM 146
Query: 234 TEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
+NG +R V+ +YQ S + +D N+ +FVG+L + V DE L
Sbjct: 147 QTLNGRRVHQAEIR---------VNWAYQ-SNTSNKEDTSNHFHIFVGDLSNEVNDEVLL 196
Query: 294 ELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
+ FS +G + ++ + GF F +R AE+AL ++G LG + IR +W
Sbjct: 197 QAFSAFGSVSEARVMWDMKTGRSRGYGFAAFRERQDAEKALSSMDGEWLGSRAIRCNW-- 254
Query: 348 SPSNKQAQPDPNQWNA 363
+N++ QP +Q A
Sbjct: 255 --ANQKGQPSISQQQA 268
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 266 VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-----PAGKRCGFVQFAD 320
V ++ +PN ++VG LD VT+E LR++F G + +VKI G GFV++ D
Sbjct: 79 VRRAAPEPNKRALYVGGLDPRVTEEVLRQIFETTGHVQNVKIIPDKNSKGFNYGFVEYDD 138
Query: 321 RSCAEEALRMLNGTQLGGQNIRLSWG--RSPSNKQ 353
AE A++ LNG ++ IR++W + SNK+
Sbjct: 139 PGAAERAMQTLNGRRVHQAEIRVNWAYQSNTSNKE 173
>gi|322709421|gb|EFZ00997.1| oligouridylate binding protein ,putative [Metarhizium anisopliae
ARSEF 23]
Length = 472
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 143/304 (47%), Gaps = 35/304 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L+ + E L F TG V VK+I +K YGF+E+ AER +
Sbjct: 84 RALYVGGLEQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGFN-YGFVEYDDPGAAERAMS 142
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + R+NWA ++DT H IFVGDL+ +V D +L + F A + +
Sbjct: 143 TLNG------RREIRVNWAYQSNTSNKEDTSSHFHIFVGDLSNEVNDDILLQAFSA-FGT 195
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D TGRT+GYGFV F D S+ +A++ M+G + +R +R A K S +
Sbjct: 196 VSEARVMWDMKTGRTRGYGFVAFRDRSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 255
Query: 261 YQNSQVAQS------------------------DDDPN-NTTVFVGNLDSIVTDEHLREL 295
Q + A + PN TT +VGNL T + L
Sbjct: 256 QQQAMQAMGLTPTTPFGHHQFPAHGVGSYDVVLNQTPNWQTTCYVGNLTPYTTPNDVVPL 315
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS-NKQA 354
F +G +V + A + F++ A A+ +NG + G+ ++ SWG+ + N Q
Sbjct: 316 FQNFGFVVESRFQADRGFAFIKMDSHENAAMAICQMNGYNVNGRPLKCSWGKDKTPNAQG 375
Query: 355 QPDP 358
DP
Sbjct: 376 NFDP 379
>gi|171687054|ref|XP_001908468.1| hypothetical protein [Podospora anserina S mat+]
gi|170943488|emb|CAP69141.1| unnamed protein product [Podospora anserina S mat+]
Length = 481
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 162/358 (45%), Gaps = 51/358 (14%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K + YGF+E+ AER +Q
Sbjct: 88 RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNA-KGYNYGFVEYDDPGSAERAMQ 146
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 147 TLNGRRVHQAE--IRVNWAYQSNNTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 203
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D TGR++GYGFV F D E +A++ M+G + +R +R A K S +
Sbjct: 204 VSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 263
Query: 261 --------------------YQNSQVAQSDDDPN-----NTTVFVGNLDSIVTDEHLREL 295
+ V D N TT +VGNL T L L
Sbjct: 264 QQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMIVNQTPAWQTTCYVGNLTPYTTQNDLVPL 323
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
F +G +V + A + F++ A A+ LNG + G+ ++ S +P +QAQ
Sbjct: 324 FQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCS---TPQAQQAQ 380
Query: 356 PDPNQWNA-------GYYGYAQGYEN-YG----------YAAAAPQDPSMYYGGYPGY 395
DPNQ + Y G Y N YG Y A Q P+ Y GG GY
Sbjct: 381 FDPNQAYSPQSAQTPAYPGTPSTYFNQYGGNFGPGQQAAYTGAQAQSPAAYGGGPMGY 438
>gi|299755830|ref|XP_001828914.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|298411401|gb|EAU92921.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 433
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 149/292 (51%), Gaps = 29/292 (9%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRAAETALQ 76
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D + + +FVGDL+ +V D +L + F A + +
Sbjct: 77 TLNGRKIFDTE--IRVNWAYQGQQNKEDTSGHYHVFVGDLSPEVNDEVLGKAFSA-FGTL 133
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT----- 256
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A N+KT
Sbjct: 134 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA-NQKTQGGAP 192
Query: 257 -------------VSASYQNS----QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQY 299
++Q + + P NTTV+VGNL T L LF
Sbjct: 193 GGGARPSAGGGAPAPVNFQGGPLTYEQVLAQTAPYNTTVYVGNLVPYTTQADLIPLFQSI 252
Query: 300 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 351
G L +++ A + FV+ A +A+ L G + G+ I+ SWG+ ++
Sbjct: 253 GYLSEIRMQADRGFAFVKLDTHEHAAQAIVQLQGQMVHGRPIKCSWGKDRAD 304
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 273 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADRSCAE 325
P ++VGNL VT+ L E+F+ G + HVKI G GFV++ D AE
Sbjct: 13 PRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAE 72
Query: 326 EALRMLNGTQLGGQNIRLSW 345
AL+ LNG ++ IR++W
Sbjct: 73 TALQTLNGRKIFDTEIRVNW 92
>gi|255647186|gb|ACU24061.1| unknown [Glycine max]
Length = 435
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 146/294 (49%), Gaps = 33/294 (11%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + + L F G + K+IR +++ YGF+++ RA A +
Sbjct: 55 CRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYHDRASAALAI 110
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
T +G + Q ++NWA A R+DT H IFVGDL+ +VTD L F YP
Sbjct: 111 MTLHGRQLYG--QALKVNWAY--ANSSREDTTGHFNIFVGDLSPEVTDATLFACFSV-YP 165
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S A+V+ D TGR+KGYGFV F D + A+ +M G + R +R AT S+
Sbjct: 166 SCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWATKGAGGSS 225
Query: 260 SYQNSQVAQS---------------------DDDPNNTTVFVGNLDSIVTDEHLRELFSQ 298
+ + + +Q+ +++P+ TTV+VGNL VT L F
Sbjct: 226 NEEKNNDSQNAVMLTNGSSDGGQDNNNEDAPENNPSYTTVYVGNLPHDVTQAELHCQFHA 285
Query: 299 YGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
G V V++ K GF+++ A A++M NG + G+N++ SWG P+
Sbjct: 286 LGAGVIEEVRVQRDKGFGFIRYNTHDEAALAIQMANGRLVRGKNMKCSWGSKPT 339
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 23/197 (11%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ +VTD +L E F++ P G K++ YGFV + D +
Sbjct: 51 DTSACRSVYVGNIHVNVTDKLLAEVFQSAGP-LAGCKLI----RKEKSSYGFVDYHDRAS 105
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ ++G + +++ A Y NS +D + +FVG+L VT
Sbjct: 106 AALAIMTLHGRQLYGQALKVNWA---------YANSS---REDTTGHFNIFVGDLSPEVT 153
Query: 289 DEHLRELFSQYGQLVHVKI------PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ K GFV F D A+ A+ + G LG + IR
Sbjct: 154 DATLFACFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIR 213
Query: 343 LSWGRSPSNKQAQPDPN 359
+W + + + N
Sbjct: 214 CNWATKGAGGSSNEEKN 230
>gi|212538447|ref|XP_002149379.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
gi|210069121|gb|EEA23212.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
Length = 482
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 142/294 (48%), Gaps = 32/294 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG--YGFIEFISRAGAERV 139
R L+IG L + E L F TG V +VK+I +K Q +G YGF+E+ AER
Sbjct: 91 RALYIGGLDARVTEDILKQIFETTGHVQSVKIIPDKNF-QSKGMNYGFVEYDDPGAAERA 149
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A +
Sbjct: 150 MQTLNGRRIHQSE--IRVNWAYQSNNTHKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 206
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S A+V+ D TGR++GYGFV F + + +A+ M+ + +R +R A K S
Sbjct: 207 GSVSEARVMWDMKTGRSRGYGFVAFREFEDAEKALKSMDREWLGSRAIRCNWANQKGQPS 266
Query: 259 ASYQNSQVAQS---------DDDPNN----------------TTVFVGNLDSIVTDEHLR 293
S Q + A P + TT +VGNL T L
Sbjct: 267 ISQQQAMAAMGMTPTAPFGHHHFPTHGANSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLV 326
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
LF +G +V ++ A + F++ A A+ LNG Q+ G+ ++ SWG+
Sbjct: 327 PLFQNFGYVVETRLQADRGFAFLKMDTHENAAMAICQLNGYQVNGRPLKCSWGK 380
>gi|356515545|ref|XP_003526460.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 435
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 146/294 (49%), Gaps = 33/294 (11%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + + L F G + K+IR +++ YGF+++ RA A +
Sbjct: 55 CRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYHDRASAALAI 110
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
T +G + Q ++NWA A R+DT H IFVGDL+ +VTD L F YP
Sbjct: 111 MTLHGRQLYG--QALKVNWAY--ANSSREDTTGHFNIFVGDLSPEVTDATLFACFSV-YP 165
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S A+V+ D TGR+KGYGFV F D + A+ +M G + R +R AT S+
Sbjct: 166 SCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWATKGAGGSS 225
Query: 260 SYQNSQVAQS---------------------DDDPNNTTVFVGNLDSIVTDEHLRELFSQ 298
+ + + +Q+ +++P+ TTV+VGNL VT L F
Sbjct: 226 NEEKNNDSQNAVMLTNGSSDGGQDNNNEDAPENNPSYTTVYVGNLPHDVTQAELHCQFHA 285
Query: 299 YGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
G V V++ K GF+++ A A++M NG + G+N++ SWG P+
Sbjct: 286 LGAGVIEEVRVQRDKGFGFIRYNTHDEAALAIQMANGRLVRGKNMKCSWGSKPT 339
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 23/197 (11%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ +VTD +L E F++ P G K++ YGFV + D +
Sbjct: 51 DTSACRSVYVGNIHVNVTDKLLAEVFQSAGP-LAGCKLI----RKEKSSYGFVDYHDRAS 105
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ ++G + +++ A Y NS +D + +FVG+L VT
Sbjct: 106 AALAIMTLHGRQLYGQALKVNWA---------YANSS---REDTTGHFNIFVGDLSPEVT 153
Query: 289 DEHLRELFSQYGQLVHVKI------PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ K GFV F D A+ A+ + G LG + IR
Sbjct: 154 DATLFACFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIR 213
Query: 343 LSWGRSPSNKQAQPDPN 359
+W + + + N
Sbjct: 214 CNWATKGAGGSSNEEKN 230
>gi|297853192|ref|XP_002894477.1| hypothetical protein ARALYDRAFT_474538 [Arabidopsis lyrata subsp.
lyrata]
gi|297340319|gb|EFH70736.1| hypothetical protein ARALYDRAFT_474538 [Arabidopsis lyrata subsp.
lyrata]
Length = 417
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 155/317 (48%), Gaps = 41/317 (12%)
Query: 67 GVAVPPQQQ----------GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRN 116
GV PPQ + P R+++ G++ + E L FA TG + + K+IR
Sbjct: 34 GVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRK 93
Query: 117 KQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTI 176
++ YGF+ + R A + T NG + Q ++NWA + G++ D + I
Sbjct: 94 DKSS----YGFVHYFDRRCASMAIMTLNGRHIFG--QPMKVNWA-YATGQREDTSSHFNI 146
Query: 177 FVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM 236
FVGDL+ +VTD L ++F A + S A+V+ D+ TGR++G+GFV F ++ + A+ EM
Sbjct: 147 FVGDLSPEVTDAALFDSFSA-FNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 205
Query: 237 NGVFCSTRPMRIGPATNKKT----------------VSASYQNSQVAQSDDDPNN----T 276
NG + S+R +R AT T + S ++ + ++D P N T
Sbjct: 206 NGKWLSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAPENNPQYT 265
Query: 277 TVFVGNLDSIVTDEHLRELFSQY--GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGT 334
TV+VGNL VT L LF G + V++ K GFV++ A A++M N
Sbjct: 266 TVYVGNLSPEVTQLDLHRLFYTLGAGAIEEVRVQRDKGFGFVRYNTHDEAALAIQMGNAQ 325
Query: 335 -QLGGQNIRLSWGRSPS 350
L + I+ SWG P+
Sbjct: 326 PYLFSRQIKCSWGNKPT 342
>gi|222624283|gb|EEE58415.1| hypothetical protein OsJ_09609 [Oryza sativa Japonica Group]
Length = 261
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 114/198 (57%), Gaps = 31/198 (15%)
Query: 175 TIFVGDL-------------AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFV 221
T+++GDL A + DY+LQETFR YPS KGAKVV D TGR+KGYGFV
Sbjct: 17 TLWIGDLQYWADENYLYNCFAPNRRDYLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGFV 76
Query: 222 RFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVG 281
+F DE+E+ RAMTEMNG++CSTRPMRI A KKT + Q + D+ T+
Sbjct: 77 KFADENEKNRAMTEMNGMYCSTRPMRISAAIPKKTTGSQLQ---YGAAKDNAAYITI--- 130
Query: 282 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADR----SCAEEALRMLNGTQLG 337
+ H + Q Q++ + K F Q R + AEEA++ L+GT +G
Sbjct: 131 --HKCIIHFHRQPCIQQ--QVMQFR----KSNQFYQIVIRQTPLASAEEAVQRLHGTTIG 182
Query: 338 GQNIRLSWGRSPSNKQAQ 355
Q +RLSWGRSP++KQ +
Sbjct: 183 QQVVRLSWGRSPASKQVE 200
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 43/91 (47%), Gaps = 14/91 (15%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE--------------VVAVKVI 114
A P Q E+RTLWIGDLQYW DE YL CFA V KV+
Sbjct: 3 AAPYHQPTSLEEVRTLWIGDLQYWADENYLYNCFAPNRRDYLLQETFRVSYPSVKGAKVV 62
Query: 115 RNKQTGQIEGYGFIEFISRAGAERVLQTFNG 145
+ TG+ +GYGF++F R + NG
Sbjct: 63 TDPNTGRSKGYGFVKFADENEKNRAMTEMNG 93
>gi|378726298|gb|EHY52757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 481
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 144/295 (48%), Gaps = 32/295 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ---TGQIEGYGFIEFISRAGAER 138
R L++G L + E L F TG VV+VK+I +K + + YGF+E+ AER
Sbjct: 81 RALYVGGLDPRVTEDVLKQIFETTGHVVSVKIIPDKNAQFSSKGFNYGFVEYDDPGAAER 140
Query: 139 VLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRAR 197
+ T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A
Sbjct: 141 AMTTLNGRRVHQAE--IRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA- 197
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ S A+V+ D TGR++GYGFV F + ++ +A+ M+G + +R +R+ A K
Sbjct: 198 FGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALASMDGEWLGSRAIRVNWANQKGQP 257
Query: 258 SASYQNSQVA-------------------QSDDDPNN------TTVFVGNLDSIVTDEHL 292
S S Q + A QS + N TT +VGNL T L
Sbjct: 258 SISQQQAMAAMGMSPTTPFGHHHFPTQGIQSYEMVVNQTPAWQTTCYVGNLTPYTTQADL 317
Query: 293 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
LF +G +V + + + F++ A A+ L+G + G+ ++ SWG+
Sbjct: 318 VPLFQNFGYVVETRFQSDRGFAFIKMDTHENAAMAICQLSGYNVNGRPLKCSWGK 372
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 266 VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC---------GFV 316
V ++ +PN ++VG LD VT++ L+++F G +V VKI K GFV
Sbjct: 71 VRRAAPEPNKRALYVGGLDPRVTEDVLKQIFETTGHVVSVKIIPDKNAQFSSKGFNYGFV 130
Query: 317 QFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWN 362
++ D AE A+ LNG ++ IR++W ++ + N ++
Sbjct: 131 EYDDPGAAERAMTTLNGRRVHQAEIRVNWAYQSNSTNKEDTSNHFH 176
>gi|212538449|ref|XP_002149380.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
gi|210069122|gb|EEA23213.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
Length = 424
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 142/294 (48%), Gaps = 32/294 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG--YGFIEFISRAGAERV 139
R L+IG L + E L F TG V +VK+I +K Q +G YGF+E+ AER
Sbjct: 91 RALYIGGLDARVTEDILKQIFETTGHVQSVKIIPDKNF-QSKGMNYGFVEYDDPGAAERA 149
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A +
Sbjct: 150 MQTLNGRRIHQSE--IRVNWAYQSNNTHKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 206
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
S A+V+ D TGR++GYGFV F + + +A+ M+ + +R +R A K S
Sbjct: 207 GSVSEARVMWDMKTGRSRGYGFVAFREFEDAEKALKSMDREWLGSRAIRCNWANQKGQPS 266
Query: 259 ASYQNSQVAQS---------DDDPNN----------------TTVFVGNLDSIVTDEHLR 293
S Q + A P + TT +VGNL T L
Sbjct: 267 ISQQQAMAAMGMTPTAPFGHHHFPTHGANSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLV 326
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
LF +G +V ++ A + F++ A A+ LNG Q+ G+ ++ SWG+
Sbjct: 327 PLFQNFGYVVETRLQADRGFAFLKMDTHENAAMAICQLNGYQVNGRPLKCSWGK 380
>gi|302772731|ref|XP_002969783.1| hypothetical protein SELMODRAFT_64568 [Selaginella moellendorffii]
gi|302806762|ref|XP_002985112.1| hypothetical protein SELMODRAFT_44478 [Selaginella moellendorffii]
gi|300146940|gb|EFJ13606.1| hypothetical protein SELMODRAFT_44478 [Selaginella moellendorffii]
gi|300162294|gb|EFJ28907.1| hypothetical protein SELMODRAFT_64568 [Selaginella moellendorffii]
Length = 425
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 147/302 (48%), Gaps = 41/302 (13%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + E L FA G + K+I+ +++ YGF+++ A +
Sbjct: 55 RSVYVGNIHIKVTEALLAEVFATVGPLEGCKLIKKEKSS----YGFVDYFDHRSAAAAII 110
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + Q+ ++NWA + +G++ D T + IFVGDL+ +VTD L F YP
Sbjct: 111 TLNGKLIFG--QSIKVNWA-YASGQREDTTGHYNIFVGDLSPEVTDATLYAAF-FMYPGC 166
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN-------- 253
A+V+ D+ +GR++GYGFV F + E RA+ EMNG + +RP+R AT
Sbjct: 167 SDARVMWDQRSGRSRGYGFVSFRSKQEAERAINEMNGKWLGSRPIRCNWATKSTGSQEDV 226
Query: 254 -------------------KKTVSASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDE 290
K+ + Q+ A D P N TTV+VGNL VT
Sbjct: 227 PTPGPVSVPEQVAVVQVQMKQEPNHDEQHEDGAMQLDGPENNPQFTTVYVGNLAHEVTQT 286
Query: 291 HLRELFSQYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
L F G V V++ K GFV++ A A++ NG + G++++ SWG
Sbjct: 287 ELHRQFHALGVGVIEDVRVQKEKGFGFVRYRTHEEAAYAIQAANGRVICGKSVKCSWGSK 346
Query: 349 PS 350
P+
Sbjct: 347 PT 348
>gi|357466551|ref|XP_003603560.1| RNA-binding protein [Medicago truncatula]
gi|355492608|gb|AES73811.1| RNA-binding protein [Medicago truncatula]
Length = 414
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 150/295 (50%), Gaps = 35/295 (11%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + + L F G + K+IR +++ YGF+++ RA A +
Sbjct: 33 CRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYHDRASAALAI 88
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
T +G + Q ++NWA A R+DT H +FVGDL+ +VTD L F Y
Sbjct: 89 MTLHGRQLYG--QALKVNWAY--ANSSREDTSGHFNVFVGDLSPEVTDATLFACFSV-YT 143
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI-------GPAT 252
+ A+V+ D TGR+KGYGFV F D + A+ +M G + R +R G ++
Sbjct: 144 TCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWATKGAGGSS 203
Query: 253 NKKTVSASYQNSQVAQS---------------DDDPNNTTVFVGNLDSIVTDEHLRELFS 297
N++ ++ S QN+ V + +++P+ TTV+VGNL VT L F
Sbjct: 204 NEEKINDS-QNAVVLTNGSSDGGQDNSNEDAPENNPSYTTVYVGNLPHDVTQAELHCQFH 262
Query: 298 QYGQ--LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
G L V++ +GK GFV++ A A++M NG + G+ ++ SWG P+
Sbjct: 263 ALGAGVLEEVRVQSGKGFGFVRYNTHEEAAMAIQMANGRPVRGKTMKCSWGSKPT 317
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 23/183 (12%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ +VTD +L E F++ P G K++ YGFV + D +
Sbjct: 29 DASACRSVYVGNIHVNVTDKLLAEVFQSAGP-LAGCKLIRK----EKSSYGFVDYHDRAS 83
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ ++G + +++ A Y NS +D + VFVG+L VT
Sbjct: 84 AALAIMTLHGRQLYGQALKVNWA---------YANS---SREDTSGHFNVFVGDLSPEVT 131
Query: 289 DEHLRELFSQYGQLVHVKI------PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ K GFV F D A+ A+ + G LG + IR
Sbjct: 132 DATLFACFSVYTTCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIR 191
Query: 343 LSW 345
+W
Sbjct: 192 CNW 194
>gi|357466549|ref|XP_003603559.1| RNA-binding protein [Medicago truncatula]
gi|355492607|gb|AES73810.1| RNA-binding protein [Medicago truncatula]
Length = 440
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 150/295 (50%), Gaps = 35/295 (11%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + + L F G + K+IR +++ YGF+++ RA A +
Sbjct: 59 CRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYHDRASAALAI 114
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
T +G + Q ++NWA A R+DT H +FVGDL+ +VTD L F Y
Sbjct: 115 MTLHGRQLYG--QALKVNWAY--ANSSREDTSGHFNVFVGDLSPEVTDATLFACFSV-YT 169
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI-------GPAT 252
+ A+V+ D TGR+KGYGFV F D + A+ +M G + R +R G ++
Sbjct: 170 TCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWATKGAGGSS 229
Query: 253 NKKTVSASYQNSQVAQS---------------DDDPNNTTVFVGNLDSIVTDEHLRELFS 297
N++ ++ S QN+ V + +++P+ TTV+VGNL VT L F
Sbjct: 230 NEEKINDS-QNAVVLTNGSSDGGQDNSNEDAPENNPSYTTVYVGNLPHDVTQAELHCQFH 288
Query: 298 QYGQ--LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
G L V++ +GK GFV++ A A++M NG + G+ ++ SWG P+
Sbjct: 289 ALGAGVLEEVRVQSGKGFGFVRYNTHEEAAMAIQMANGRPVRGKTMKCSWGSKPT 343
>gi|320585953|gb|EFW98632.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Grosmannia clavigera kw1407]
Length = 488
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 159/346 (45%), Gaps = 37/346 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K + YGF+E+ AER +Q
Sbjct: 87 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNA-KGYNYGFVEYDDPGAAERAMQ 145
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
NG + E R+NWA ++DT H IFVGDL+ +V D +L + F + + S
Sbjct: 146 NLNGRRVHQSE--IRVNWAYQSNTTSKEDTSGHFHIFVGDLSNEVNDEVLTQAFTS-FGS 202
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D TGR++GYGFV F D + +A++ M+G + +R +R A K S +
Sbjct: 203 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 262
Query: 261 YQNS--QVAQSDDDPNN-----------------------TTVFVGNLDSIVTDEHLREL 295
Q + QV + P TT +VGNL T L L
Sbjct: 263 QQQALQQVGMTPTTPFGHHHFPTQGINSYEMVINQTPAWQTTCYVGNLTPYTTQNDLVPL 322
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
F +G +V + + + F++ A A+ LNG + G+ ++ SWG+ +
Sbjct: 323 FQNFGYVVESRFQSDRGFAFIKLDSHENAAMAICQLNGYNVNGRPLKCSWGKDKTPNAQG 382
Query: 356 PDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPG-YGNYQQ 400
DP+Q + G AQ Y P P+ Y+ Y YGN QQ
Sbjct: 383 FDPSQQSYGSPQSAQAPGPY------PGSPTTYFPQYGAQYGNGQQ 422
>gi|226528727|ref|NP_001148487.1| mRNA 3-UTR binding protein [Zea mays]
gi|195619730|gb|ACG31695.1| mRNA 3-UTR binding protein [Zea mays]
Length = 447
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 149/299 (49%), Gaps = 35/299 (11%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E+ L F G V K+IR +++ +GF+++ R A
Sbjct: 68 PSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSS----FGFVDYYDRRSAA 123
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRA 196
+ T +G + Q ++NWA A +R+DT H IFVGDL+++V D L F A
Sbjct: 124 LAIMTLHGRHVYG--QAIKVNWAY--ASTQREDTSGHFHIFVGDLSSEVNDATLYACFSA 179
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
YPS A+V+ D TGR++GYGFV F ++ E A+ EM G + +R +R AT +
Sbjct: 180 -YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAIAEMTGKWLGSRQIRCNWATKNNS 238
Query: 257 --------------VSASYQNSQVAQSDD---------DPNNTTVFVGNLDSIVTDEHLR 293
+ S NS S D +P+ TTV+VGNL V + L
Sbjct: 239 EEKPETDNHNAVVLTNGSSNNSATDASQDAGSKEPPQNNPDCTTVYVGNLGHEVNRDELH 298
Query: 294 ELFSQY--GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
F G + V++ K GFV+++ A A++M NG+ + G+ I+ SWG P+
Sbjct: 299 RHFYNLGVGAIEEVRVQQDKGFGFVRYSTHGEAALAIQMSNGSVVRGKPIKCSWGVKPT 357
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 24/201 (11%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ +VT+ +L E F+ + G + +GFV + D
Sbjct: 67 DPSTCRSVYVGNVNPNVTESLLIEVFQ-----SAGLVERCKLIRKEKSSFGFVDYYDRRS 121
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ ++G + +++ A Y ++Q +D + +FVG+L S V
Sbjct: 122 AALAIMTLHGRHVYGQAIKVNWA---------YASTQ---REDTSGHFHIFVGDLSSEVN 169
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ + G FV F ++ AE A+ + G LG + IR
Sbjct: 170 DATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAIAEMTGKWLGSRQIR 229
Query: 343 LSWGRSPSNKQAQPDPNQWNA 363
+W + +N + +P+ + NA
Sbjct: 230 CNWA-TKNNSEEKPETDNHNA 249
>gi|409083337|gb|EKM83694.1| hypothetical protein AGABI1DRAFT_110331 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 444
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 149/304 (49%), Gaps = 36/304 (11%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRSAETALQ 76
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D + + +FVGDL+ +V D +L + F A + +
Sbjct: 77 TLNGRKIFDTE--IRVNWAYQGQQNKEDTSGHYHVFVGDLSPEVNDDVLAKAFSA-FGTL 133
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA-- 259
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A K A
Sbjct: 134 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGGAPA 193
Query: 260 -------------------------SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
SY+ S V Q+ NTTV+VGNL T L
Sbjct: 194 VQQSPRPAGSTGGAPAPINFQGGPLSYE-SVVQQT--PAYNTTVYVGNLVPYCTQADLIP 250
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 354
LF G L +++ A + FV+ A A+ L G + G+ I+ SWG+ ++ A
Sbjct: 251 LFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGTA 310
Query: 355 QPDP 358
P
Sbjct: 311 AAQP 314
>gi|393218535|gb|EJD04023.1| hypothetical protein FOMMEDRAFT_133373 [Fomitiporia mediterranea
MF3/22]
Length = 422
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 145/285 (50%), Gaps = 26/285 (9%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 15 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRAAETALQ 73
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G+ K D + +FVGDL+ +V D +L + F A + +
Sbjct: 74 TLNGRKIFDTE--IRVNWAYQGSTAKEDTSGHFHVFVGDLSPEVNDAVLAKAFSA-FGTL 130
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA-- 259
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A N+KT A
Sbjct: 131 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA-NQKTQGAPA 189
Query: 260 -------------SYQNS----QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 302
++Q + NTTV+VGNL T L LF G L
Sbjct: 190 PRPTGAGGAPAPINFQGGPLSYETVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQSIGYL 249
Query: 303 VHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
+++ A + FV+ A A+ L G + G+ I+ SWG+
Sbjct: 250 SEIRMQADRGFAFVKLDTHENAAMAIVQLQGQMVHGRPIKCSWGK 294
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 273 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADRSCAE 325
P ++VGNL VT+ L E+F+ G + HVKI G GFV++ D AE
Sbjct: 10 PRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAE 69
Query: 326 EALRMLNGTQLGGQNIRLSW 345
AL+ LNG ++ IR++W
Sbjct: 70 TALQTLNGRKIFDTEIRVNW 89
>gi|255550383|ref|XP_002516242.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223544728|gb|EEF46244.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 358
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 152/291 (52%), Gaps = 31/291 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + E L F++TG + K+IR +++ YGF+++ R A +
Sbjct: 44 RSVYVGNIHPQVTEPLLQEVFSNTGLIEGCKLIRKEKSS----YGFVDYFDRRSAALSIV 99
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + Q ++NWA A +R+DT H IFVGDL+ +VTD L +F A +PS
Sbjct: 100 TLNGRHLFG--QPIKVNWAY--ASSQREDTSGHFNIFVGDLSPEVTDATLYASF-ALFPS 154
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D+ TGR++G+GFV F ++ + A+ E+NG + +R +R A T +
Sbjct: 155 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWIGSRQIRCNWAAKGTTSNDD 214
Query: 261 YQNSQVA---------------QSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQY-- 299
Q+S ++DD P N TTV+VGNL VT L F
Sbjct: 215 KQSSDAKSVVELTNGTSEDSQEKNDDAPENNPQYTTVYVGNLAPEVTSVDLHRHFYGLGA 274
Query: 300 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
G + V++ K GFV+++ + A A++M N L G+ ++ SWG P+
Sbjct: 275 GTIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARILYGKPVKCSWGSKPT 325
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--GFVQFADRSCAEEAL 328
D +V+VGN+ VT+ L+E+FS G + K+ ++ GFV + DR A ++
Sbjct: 39 DSTTCRSVYVGNIHPQVTEPLLQEVFSNTGLIEGCKLIRKEKSSYGFVDYFDRRSAALSI 98
Query: 329 RMLNGTQLGGQNIRLSWGRSPSNKQ 353
LNG L GQ I+++W + S ++
Sbjct: 99 VTLNGRHLFGQPIKVNWAYASSQRE 123
>gi|367026720|ref|XP_003662644.1| hypothetical protein MYCTH_2303522 [Myceliophthora thermophila ATCC
42464]
gi|347009913|gb|AEO57399.1| hypothetical protein MYCTH_2303522 [Myceliophthora thermophila ATCC
42464]
Length = 500
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 147/306 (48%), Gaps = 31/306 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V +VK+I +K YGF+E+ AER +Q
Sbjct: 90 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKNAKGYN-YGFVEYDDPGAAERAMQ 148
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 149 TLNGRRVHQSE--IRVNWAYQSNNSNKEDTSNHFHIFVGDLSNEVNDEVLFQAFSA-FGS 205
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK----- 255
A+V+ D TGR++GYGFV F + ++ +A++ M+G + +R +R A K
Sbjct: 206 ISEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 265
Query: 256 ----------TVSASYQNSQV----AQSDDDPNN------TTVFVGNLDSIVTDEHLREL 295
T + Y + S D N TT +VGNL T + L
Sbjct: 266 QQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMVVNQTPAWQTTCYVGNLTPYTTQTDIVPL 325
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS-NKQA 354
F +G +V + A + F++ A A+ LNG + G+ ++ SWG+ + N
Sbjct: 326 FQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDKTPNHHQ 385
Query: 355 QPDPNQ 360
Q DP+Q
Sbjct: 386 QFDPHQ 391
>gi|358059025|dbj|GAA95206.1| hypothetical protein E5Q_01862 [Mixia osmundae IAM 14324]
Length = 352
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 144/286 (50%), Gaps = 26/286 (9%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L+IG++ + E L FA G V VK+I R Q G + YGF+EF + GAE+ LQ
Sbjct: 14 LYIGNISPRVTEYMLQEVFALAGPVQQVKIIPDRTFQHGGLN-YGFVEFYTMQGAEQALQ 72
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T G + + E ++NWA K D T +F GDL+ +VTD +LQ+TF A + S
Sbjct: 73 TLAGRKLFDTE--MKVNWAYQNQTAKEDVTNHFHVFCGDLSPEVTDDILQKTFSA-FGSL 129
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK------ 255
A+V+ D +G+++GYGF+ F D ++ A+ MNG + +R +R+ A K
Sbjct: 130 SDARVMWDMASGKSRGYGFLAFRDRADAEAAINAMNGEWLGSRAIRVNWANQKNQGMMGD 189
Query: 256 -------TVSASYQNSQVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQ 301
A QV SD + +NTTV+VGNL T L LF YG
Sbjct: 190 GGMGEGPPPPARSGGFQVGGSDYNMVVTQTPVSNTTVYVGNLVPYCTQADLIPLFQGYGY 249
Query: 302 LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
+V +++ A + FV+ A A+ L G G++++ SWG+
Sbjct: 250 IVEIRMQADRGFAFVKLDTHEHAAMAIAYLTGQMCQGRSLKCSWGK 295
>gi|336389833|gb|EGO30976.1| hypothetical protein SERLADRAFT_455426 [Serpula lacrymans var.
lacrymans S7.9]
Length = 439
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 149/300 (49%), Gaps = 33/300 (11%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 19 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRAAETALQ 77
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D T + +FVGDL+ +V D +L + F A + +
Sbjct: 78 TLNGRKIFDTE--IRVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEILGKAFSA-FGTM 134
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A K S +
Sbjct: 135 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSVAV 194
Query: 262 Q------------------------NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 297
+S V Q+ N+TV+VGNL T L LF
Sbjct: 195 ASPPRPGATGGAPAPINFQGGPLSYDSVVQQTPS--YNSTVYVGNLVPYCTQADLIPLFQ 252
Query: 298 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN-KQAQP 356
G L +++ A + FV+ A A+ L G + G+ I+ SWG+ ++ AQP
Sbjct: 253 SIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGTTAQP 312
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 273 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADRSCAE 325
P ++VGNL VT+ L E+F+ G + HVKI G GFV++ D AE
Sbjct: 14 PRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAE 73
Query: 326 EALRMLNGTQLGGQNIRLSW 345
AL+ LNG ++ IR++W
Sbjct: 74 TALQTLNGRKIFDTEIRVNW 93
>gi|157384980|ref|NP_001025137.2| tRNA selenocysteine 1-associated protein 1-like [Danio rerio]
Length = 316
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 114/186 (61%), Gaps = 7/186 (3%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +LW+GDL +MDE ++ F+ GE VK+I ++ TG GY F+E A +R
Sbjct: 5 MTSLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRC 64
Query: 140 LQTFNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+Q NG +P N + F+LN+A++G ++ + P+ ++FVGDL ++V DY L + F +
Sbjct: 65 VQRLNGKLVPGSNPPRKFKLNYATYG--KRPEPGPEFSVFVGDLTSEVDDYQLHQFFLKK 122
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM-NGVFCSTRPMRIGPATNKKT 256
+PS KGAKVV D G ++GYGFV+F DE+EQ +A+ E N +P+RI A NK
Sbjct: 123 FPSCKGAKVVTDPY-GNSRGYGFVKFSDENEQKKALEEFQNASGLGGKPIRISIAVNKGN 181
Query: 257 VSASYQ 262
+++Y
Sbjct: 182 KASTYH 187
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 20/189 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + +++ F + G K++ R+TG + GY FV DE+ R +
Sbjct: 7 SLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRCVQ 66
Query: 235 EMNGVFCSTRPMRIGPATNK-KTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
+NG ++ P +N + +Y + + + +VFVG+L S V D L
Sbjct: 67 RLNG--------KLVPGSNPPRKFKLNY--ATYGKRPEPGPEFSVFVGDLTSEVDDYQLH 116
Query: 294 ELF-----SQYGQLVHVKIPAG--KRCGFVQFADRSCAEEALRML-NGTQLGGQNIRLSW 345
+ F S G V V P G + GFV+F+D + ++AL N + LGG+ IR+S
Sbjct: 117 QFFLKKFPSCKGAKV-VTDPYGNSRGYGFVKFSDENEQKKALEEFQNASGLGGKPIRISI 175
Query: 346 GRSPSNKQA 354
+ NK +
Sbjct: 176 AVNKGNKAS 184
>gi|123904573|sp|Q4KM14.1|TSP1L_DANRE RecName: Full=tRNA selenocysteine 1-associated protein 1-like;
AltName: Full=tRNA selenocysteine 1-associated protein
1; AltName: Full=tRNA selenocysteine-associated protein
1
gi|68534021|gb|AAH98884.1| TRNA selenocysteine 1 associated protein 1 [Danio rerio]
Length = 316
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 114/186 (61%), Gaps = 7/186 (3%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +LW+GDL +MDE ++ F+ GE VK+I ++ TG GY F+E A +R
Sbjct: 5 MTSLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRC 64
Query: 140 LQTFNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+Q NG +P N + F+LN+A++G ++ + P+ ++FVGDL ++V DY L + F +
Sbjct: 65 VQRLNGKLVPGSNPPRKFKLNYATYG--KRPEPGPEFSVFVGDLTSEVDDYQLHQFFLKK 122
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM-NGVFCSTRPMRIGPATNKKT 256
+PS KGAKVV D G ++GYGFV+F DE+EQ +A+ E N +P+RI A NK
Sbjct: 123 FPSCKGAKVVTDPY-GNSRGYGFVKFSDENEQKKALEEFQNASGLGGKPIRISIAVNKGN 181
Query: 257 VSASYQ 262
+++Y
Sbjct: 182 KASTYH 187
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 20/189 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + +++ F + G K++ R+TG + GY FV DE+ R +
Sbjct: 7 SLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRCVQ 66
Query: 235 EMNGVFCSTRPMRIGPATNK-KTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
+NG ++ P +N + +Y + + + +VFVG+L S V D L
Sbjct: 67 RLNG--------KLVPGSNPPRKFKLNY--ATYGKRPEPGPEFSVFVGDLTSEVDDYQLH 116
Query: 294 ELF-----SQYGQLVHVKIPAG--KRCGFVQFADRSCAEEALRML-NGTQLGGQNIRLSW 345
+ F S G V V P G + GFV+F+D + ++AL N + LGG+ IR+S
Sbjct: 117 QFFLKKFPSCKGAKV-VTDPYGNSRGYGFVKFSDENEQKKALEEFQNASGLGGKPIRISI 175
Query: 346 GRSPSNKQA 354
+ NK +
Sbjct: 176 AVNKGNKAS 184
>gi|400595086|gb|EJP62896.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 468
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 144/305 (47%), Gaps = 31/305 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K YGF+E+ A+R +Q
Sbjct: 68 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGFN-YGFVEYDDPGAADRAMQ 126
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT H IFVGDL+ +V D +L + F A + S
Sbjct: 127 TLNGRRVHQSE--IRVNWAYQANSSGKEDTSGHFHIFVGDLSNEVNDDILTQAFSA-FGS 183
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D TGR++GYGFV F D E +A++ M+G + +R +R A K S +
Sbjct: 184 VSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 243
Query: 261 --------------------YQNSQVAQSD----DDPN-NTTVFVGNLDSIVTDEHLREL 295
+ V D PN TTV+VGNL T + L
Sbjct: 244 QQQAMQAMGLTPTTPFGHHQFPTHGVGSYDVILAQTPNWQTTVYVGNLTPYTTPNDVVPL 303
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
F +G +V + A + F++ A A+ +NG + G+ ++ SWG+ + Q
Sbjct: 304 FQNFGFVVESRFQADRGFAFIKMDTHENASMAICQMNGYNVNGRPLKCSWGKDKTPNQGF 363
Query: 356 PDPNQ 360
DP+Q
Sbjct: 364 -DPSQ 367
>gi|82400162|gb|ABB72820.1| oligouridylate binding protein-like protein [Solanum tuberosum]
Length = 417
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 153/296 (51%), Gaps = 31/296 (10%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L F+ TG V K+IR +++ YGFI + R A
Sbjct: 50 PSTCRSVFVGNIHPQVTEPLLQEVFSSTGLVEGCKLIRKEKSS----YGFIHYYDRRSAA 105
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ + NG + Q ++NWA F +G++ D + IFVGDL+ +VTD ML F
Sbjct: 106 LAIVSLNGRHLFG--QPIKVNWA-FASGQREDTSSHFNIFVGDLSPEVTDAMLFACFSV- 161
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT----- 252
YP A+V+ D+ TGR++G+GFV F ++ + A+ ++ G + +R +R AT
Sbjct: 162 YPGCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGANS 221
Query: 253 -------NKKTV----SASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFS 297
+ K+V + S ++ + A + D P N TTV+VGN+ VT L F
Sbjct: 222 NDDKQSSDAKSVVELTNGSSEDGKEAANSDAPENNPQYTTVYVGNIAPEVTQLDLHRYFH 281
Query: 298 QYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 350
G V ++I K GFV++ + A A++M N + LGG+ I+ SWG P+
Sbjct: 282 ALGAGVIEEIRIQRDKGFGFVRYNTHAEAALAIQMGNTHSVLGGRQIKCSWGNKPT 337
>gi|224121456|ref|XP_002330832.1| predicted protein [Populus trichocarpa]
gi|222872634|gb|EEF09765.1| predicted protein [Populus trichocarpa]
Length = 415
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 148/293 (50%), Gaps = 30/293 (10%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
R++++G++ + + L FA G + K+IR ++ YGF+++ R+ A
Sbjct: 34 SCRSVYVGNIHVNVTDKLLAEVFATAGPLAGCKLIRKDKSS----YGFVDYHDRSSAALA 89
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
+ T +G + + ++NWA + +G++ D + IFVGDL+ +VTD L F +P
Sbjct: 90 IMTLHGRQLYG--EALKVNWA-YASGQREDTSGHFHIFVGDLSPEVTDATLYACFSV-FP 145
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI-----GPATNK 254
S A+V+ D TGR+KGYGFV F ++ E A+ ++ G + R +R G +N+
Sbjct: 146 SCSDARVMWDHKTGRSKGYGFVSFRNQQEAQSAINDLTGKWLGNRQIRCNWATKGVGSNE 205
Query: 255 KTVSASYQNSQVAQS---------------DDDPNNTTVFVGNLDSIVTDEHLRELFSQY 299
++ QN+ V + +++P TTV+VGNL +VT L F
Sbjct: 206 DKQNSDNQNAVVLTNGSSAGSQENTNEEAPENNPAYTTVYVGNLSHVVTQAELHGNFHAL 265
Query: 300 GQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
G V V++ K GFV++ A A++M NG + G+ ++ SWG P+
Sbjct: 266 GAGVIEEVRVQRDKGFGFVRYNTHEEAAFAIQMGNGKIVCGKPMKCSWGSKPT 318
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 82/200 (41%), Gaps = 25/200 (12%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ +VTD +L E F P + D+ YGFV + D S
Sbjct: 31 DSSSCRSVYVGNIHVNVTDKLLAEVFATAGPLAGCKLIRKDK-----SSYGFVDYHDRSS 85
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ ++G +++ A Q +D + +FVG+L VT
Sbjct: 86 AALAIMTLHGRQLYGEALKVNWAYAS------------GQREDTSGHFHIFVGDLSPEVT 133
Query: 289 DEHLRELFSQYGQLVHVKI------PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS + ++ K GFV F ++ A+ A+ L G LG + IR
Sbjct: 134 DATLYACFSVFPSCSDARVMWDHKTGRSKGYGFVSFRNQQEAQSAINDLTGKWLGNRQIR 193
Query: 343 LSWGRS--PSNKQAQPDPNQ 360
+W SN+ Q NQ
Sbjct: 194 CNWATKGVGSNEDKQNSDNQ 213
>gi|224073594|ref|XP_002304117.1| predicted protein [Populus trichocarpa]
gi|222841549|gb|EEE79096.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 151/296 (51%), Gaps = 31/296 (10%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L FA TG V K+IR +++ YGFI + R A
Sbjct: 49 PSTCRSVYVGNIHTQVTEPLLQEVFASTGPVEGCKLIRKEKSS----YGFIHYFDRRAAA 104
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ + NG + Q ++NWA + +G++ D + IFVGDL+ +VTD L F
Sbjct: 105 LAILSLNGRHLFG--QPIKVNWA-YASGQREDTSGHFNIFVGDLSPEVTDATLYACFSV- 160
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI-----GPAT 252
YPS A+V+ D+ TGR++G+GFV F ++ + A+ ++ G + +R +R G +
Sbjct: 161 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWASKGAGS 220
Query: 253 NK---KTVSASYQNSQVAQSDDD---PNN---------TTVFVGNLDSIVTDEHLRELFS 297
N+ + S S + S+D PNN TTV+VGNL VT L F
Sbjct: 221 NEDKQSSDSKSVVELTIGTSEDGMEAPNNEAPENNPQYTTVYVGNLSPEVTQPVLHRHFH 280
Query: 298 QYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 350
G V V++ K GFV+F+ + A A++M N + L G+ I+ SWG P+
Sbjct: 281 VLGAGVIEEVRVQRDKGFGFVRFSTHAEAAVAIQMGNAQSLLCGKQIKCSWGSKPT 336
>gi|426201609|gb|EKV51532.1| hypothetical protein AGABI2DRAFT_189771 [Agaricus bisporus var.
bisporus H97]
Length = 469
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 149/304 (49%), Gaps = 36/304 (11%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRSAETALQ 76
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D + + +FVGDL+ +V D +L + F A + +
Sbjct: 77 TLNGRKIFDTE--IRVNWAYQGQQNKEDTSGHYHVFVGDLSPEVNDDVLAKAFSA-FGTL 133
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA-- 259
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A K A
Sbjct: 134 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGGAPA 193
Query: 260 -------------------------SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
SY+ S V Q+ NTTV+VGNL T L
Sbjct: 194 VQQSPRPAGSTGGAPAPINFQGGPLSYE-SVVQQT--PAYNTTVYVGNLVPYCTQADLIP 250
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 354
LF G L +++ A + FV+ A A+ L G + G+ I+ SWG+ ++ A
Sbjct: 251 LFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGTA 310
Query: 355 QPDP 358
P
Sbjct: 311 AAQP 314
>gi|291228735|ref|XP_002734331.1| PREDICTED: tRNA selenocysteine associated protein 1-like isoform 2
[Saccoglossus kowalevskii]
Length = 334
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 112/178 (62%), Gaps = 6/178 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
TLW+GD++ + DE ++ F+H+GE AVK+++NK TG Y F++F A AERV+
Sbjct: 4 TLWMGDVEPFWDENFIRGAFSHSGEQPTAVKLMKNKLTGGQARYCFVDFRDSAAAERVMS 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRD-DTPDHTIFVGDLAADVTDYMLQETFRARY 198
NG P+PN + F+LN+A +G + + + ++FVG+L+ +V DY L F RY
Sbjct: 64 ICNGKPVPNSTPPRMFKLNFAVYGMQAPPNFNRKEFSLFVGELSPEVDDYALYNFFSRRY 123
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM-NGVFCSTRPMRIGPATNKK 255
PS KGAKV++D G ++G+GFVRFG E EQ RA+ EM N R +R+ AT KK
Sbjct: 124 PSIKGAKVIMDN-AGMSRGFGFVRFGSEEEQQRALNEMQNASGLGGRSLRVSIATPKK 180
>gi|390604168|gb|EIN13559.1| hypothetical protein PUNSTDRAFT_117298 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 425
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 157/320 (49%), Gaps = 45/320 (14%)
Query: 67 GVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEG 124
GVA PQ++ L++G+L + E L FA G V VK+I RN Q G +
Sbjct: 8 GVAEAPQRRAH------LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN- 60
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
YGF+E+I AE LQT NG + + E R+NWA G K D + + +FVGDL+ +
Sbjct: 61 YGFVEYIDMRAAETALQTLNGRKIFDTE--IRVNWAYQGNQNKEDTSNHYHVFVGDLSPE 118
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
V D +LQ+ F A + S A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R
Sbjct: 119 VNDEVLQKAFSA-FGSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSR 177
Query: 245 PMRIGPATNKKTVSA------------------------------SYQNSQVAQSDDDPN 274
+R+ A K + SY+ S V+Q+
Sbjct: 178 AIRVNWANQKTQGAMGGGAPAPAAARPSPGLGGSPAPMNFQGGPISYE-SVVSQTP--AY 234
Query: 275 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGT 334
N+TV+VGNL T L LF G L +++ A + FV+ A A+ L G
Sbjct: 235 NSTVYVGNLVPYCTQADLIPLFQSIGYLQEIRMQADRGFAFVKLDTHEHAAMAIIQLQGQ 294
Query: 335 QLGGQNIRLSWGRSPSNKQA 354
+ G+ I+ SWG+ ++ A
Sbjct: 295 MVHGRPIKCSWGKDRADGGA 314
>gi|448523083|ref|XP_003868848.1| hypothetical protein CORT_0C05700 [Candida orthopsilosis Co 90-125]
gi|380353188|emb|CCG25944.1| hypothetical protein CORT_0C05700 [Candida orthopsilosis]
Length = 444
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 146/288 (50%), Gaps = 24/288 (8%)
Query: 84 LWIGDLQ-YWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+W+GDL W +E+ + A +VK++R++ Y F+ F + + LQ
Sbjct: 79 MWMGDLDPSWTEESIHSIWSALVQPPKSVKIMRDRLNPSKPSYCFVTFEDQEALDWALQR 138
Query: 143 FNGTPMPNGEQNFRLNWASF--------GAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
NG +PN ++ F+++ AS G+G R T + ++F+GDLA DV + L TF
Sbjct: 139 -NGQLIPNSQRKFKISHASAKNSTSGGAGSGHSRQSTGEFSLFIGDLAQDVGEAALYSTF 197
Query: 195 RARYPS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
+YP+ K A+V++D+ + KG+GFV+F +A+ EM GV ++ +R+G A
Sbjct: 198 NLKYPNQIKSARVIVDQDSKVGKGFGFVKFFTGEVMEKALKEMQGVMVGSKTIRVGIAAG 257
Query: 254 KKTVSAS-------YQNSQVAQSD------DDPNNTTVFVGNLDSIVTDEHLRELFSQYG 300
+ V +S Y+ + QS D NT + + L S T+ L +F +G
Sbjct: 258 SEVVQSSSHANKPDYKKIPITQSQPELEAGTDEKNTNISISGLSSKFTESELELMFLTFG 317
Query: 301 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
LV+ K+ + G+V+F R+ AE A+ L + + G + L+WG S
Sbjct: 318 DLVYCKLSRDLQRGYVKFVSRNAAELAMAHLTSSVVNGCRLDLTWGSS 365
>gi|326534302|dbj|BAJ89501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 447
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 152/299 (50%), Gaps = 35/299 (11%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L F +G V K+IR +++ +GF+++ R A
Sbjct: 69 PSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDRRSAA 124
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRA 196
+ T +G + Q ++NWA A +R+DT H IFVGDL+++V D L F +
Sbjct: 125 LAIMTLHGRHIYG--QAIKVNWAF--ASTQREDTSGHFHIFVGDLSSEVNDATLYACF-S 179
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA----- 251
YPS A+V+ D TGR++GYGFV F ++ E A+TEM G + +R +R A
Sbjct: 180 TYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNA 239
Query: 252 --------------TNKKTVSASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLR 293
TN + +A+ + +Q S ++P N TTV+VGNL V + L
Sbjct: 240 EEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELH 299
Query: 294 ELFSQY--GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
F G + V++ K GF++++ A A++M NG + G+ I+ SWG P+
Sbjct: 300 RHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSWGNKPT 358
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 83/198 (41%), Gaps = 23/198 (11%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ +VT+ +L E F+ P + + ++ +GFV + D
Sbjct: 68 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEK-----SSFGFVDYYDRRS 122
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ ++G + +++ A Q +D + +FVG+L S V
Sbjct: 123 AALAIMTLHGRHIYGQAIKVNWAFAS------------TQREDTSGHFHIFVGDLSSEVN 170
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ + G FV F ++ AE A+ + G LG + IR
Sbjct: 171 DATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIR 230
Query: 343 LSWGRSPSNKQAQPDPNQ 360
+W + ++ Q N
Sbjct: 231 CNWATKTNAEEKQETDNH 248
>gi|38141765|dbj|BAD00701.1| TIA-1 homologue [Bombyx mori]
Length = 388
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 156/322 (48%), Gaps = 38/322 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E +L T F G+V K+IR + Y F+EF A L
Sbjct: 8 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN---DPYAFLEFTCHTAAVTALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETFRARYPS 200
N + + E ++NWA+ + + DT +H IFVGDL+ ++ +L+E F A +
Sbjct: 65 AMNKRVVLDKE--MKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK---KTV 257
++V D T ++KGY FV F +++ A+ MNG + +R +R +T K K V
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGV 181
Query: 258 SASYQNSQVAQ--------SDDDPNNTTVFVGNLDS-IVTDEHLRELFSQYGQLVHVKIP 308
+ +S+ A+ + P NTTV+ G S I+T+E ++ FSQ+GQ+ +++
Sbjct: 182 NEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF 241
Query: 309 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ------------- 355
K F++F + A A+ + T++ G ++ WG+ + Q
Sbjct: 242 RDKGYAFIRFTTKEAAAHAIGATHNTEISGHTVKCFWGKENGGAENQSGNNSSAAPPAMG 301
Query: 356 -----PDPNQWNAGYYGYAQGY 372
P P Q GY+ YAQGY
Sbjct: 302 GQSRYPYPYQQGMGYW-YAQGY 322
>gi|291228733|ref|XP_002734330.1| PREDICTED: tRNA selenocysteine associated protein 1-like isoform 1
[Saccoglossus kowalevskii]
Length = 347
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 113/191 (59%), Gaps = 19/191 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
TLW+GD++ + DE ++ F+H+GE AVK+++NK TG Y F++F A AERV+
Sbjct: 4 TLWMGDVEPFWDENFIRGAFSHSGEQPTAVKLMKNKLTGGQARYCFVDFRDSAAAERVMS 63
Query: 142 TFNGTPMPNGE--QNFRLNWASFG--------------AGEKRDDTPDHTIFVGDLAADV 185
NG P+PN + F+LN+A +G A K + + ++FVG+L+ +V
Sbjct: 64 ICNGKPVPNSTPPRMFKLNFAVYGMQAPPKAAGATGGPADPKSFNRKEFSLFVGELSPEV 123
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM-NGVFCSTR 244
DY L F RYPS KGAKV++D G ++G+GFVRFG E EQ RA+ EM N R
Sbjct: 124 DDYALYNFFSRRYPSIKGAKVIMDN-AGMSRGFGFVRFGSEEEQQRALNEMQNASGLGGR 182
Query: 245 PMRIGPATNKK 255
+R+ AT KK
Sbjct: 183 SLRVSIATPKK 193
>gi|354548091|emb|CCE44827.1| hypothetical protein CPAR2_406300 [Candida parapsilosis]
Length = 445
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 145/287 (50%), Gaps = 23/287 (8%)
Query: 84 LWIGDLQ-YWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+W+GDL W +E+ ++K++R++ Y F+ F + + LQ
Sbjct: 81 MWMGDLDPSWTEESIYTMWSTLVAPPKSLKIMRDRLNPSKPSYCFVTFGDQEALDWALQR 140
Query: 143 FNGTPMPNGEQNFRLNWAS-------FGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFR 195
NG +P+ ++ F+L+ AS G G R T + ++FVGDLA DV++ L F
Sbjct: 141 -NGQMVPSTQRRFKLSHASARNNNPNVGGGSGRPSTGEFSLFVGDLAQDVSEAALYSKFN 199
Query: 196 ARYPS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+YP+ K A+VVID+ + KG+GFV+F + RA+ EM GV ++ +R+G A
Sbjct: 200 LKYPNEIKSARVVIDQNSKLGKGFGFVKFFHSATMERALKEMQGVMLGSKAIRVGIAAGS 259
Query: 255 KTVSASYQNSQ-------VAQ------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQ 301
+T ++ S+ VAQ +D D NT + + L S T L +F +G
Sbjct: 260 ETTQTNHAQSKPDLKKLAVAQNQPELNADTDERNTNITISGLSSNFTARELELVFLSFGD 319
Query: 302 LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
L++ K+ + G+V+F R+ AE A+ L+ T L + L+WG S
Sbjct: 320 LIYCKLSRDLQKGYVKFVSRNAAELAMTQLSDTVLHNCRLELTWGSS 366
>gi|225429862|ref|XP_002283326.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]
Length = 436
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 146/293 (49%), Gaps = 30/293 (10%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
R++++G++ + E L F G + K+IR ++ YGF++++ RA A
Sbjct: 56 SCRSVYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKDKSS----YGFVDYLDRASASLA 111
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
+ T +G + Q ++NWA + +G++ D + IFVGDL+ +VTD L F +
Sbjct: 112 IMTLHGRQVYG--QALKVNWA-YASGQREDTSGHFNIFVGDLSPEVTDATLYACFSV-FA 167
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT------- 252
S A+V+ D TGR+KGYGFV F ++ + A+ +++G + R +R AT
Sbjct: 168 SCSDARVMWDHKTGRSKGYGFVSFRNQQDAQSAINDLSGKWLGNRQIRCNWATKGAGFNE 227
Query: 253 ------NKKTV-------SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQY 299
N+ V S +N+ +++P TTV+VGNL VT L F
Sbjct: 228 DKQVNENQNAVVLTNGSSDGSQENTNEEAPENNPAYTTVYVGNLSHEVTQAELHCQFHAL 287
Query: 300 GQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
G V V+I K GFV++ A A++M NG + G++++ SWG P+
Sbjct: 288 GAGVIEEVRIQRDKGFGFVRYHTHEEAALAIQMANGRIVRGKSMKCSWGSKPT 340
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--GFVQFADRSCAEEAL 328
D + +V+VGN+ VT++ L E+F G L K+ + GFV + DR+ A A+
Sbjct: 53 DSSSCRSVYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKDKSSYGFVDYLDRASASLAI 112
Query: 329 RMLNGTQLGGQNIRLSWGRSPSNKQ 353
L+G Q+ GQ ++++W + ++
Sbjct: 113 MTLHGRQVYGQALKVNWAYASGQRE 137
>gi|209737894|gb|ACI69816.1| tRNA selenocysteine-associated protein 1 SECp43 [Salmo salar]
Length = 271
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 113/179 (63%), Gaps = 8/179 (4%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQ-IEGYGFIEFISRAGAER 138
+ TLW+G+L+ +MDE ++ F GE VV+V++IRNK TG+ GY F+E A AER
Sbjct: 1 MSTLWMGNLEPYMDENFITRAFGTMGELVVSVRIIRNKMTGRGAAGYCFVELTDEATAER 60
Query: 139 VLQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
L+ NG +P + F+LN A+FG ++ + +P +++FVGDL +V D ML E F
Sbjct: 61 CLRKVNGKALPGATPPRRFKLNRATFG--KQGESSPLYSLFVGDLTPEVDDGMLYEFFYN 118
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
RYPS +G KVV+D TG +KG GFV+F D+ Q A+ E G V ++P+R+ A NK
Sbjct: 119 RYPSCRGGKVVLDG-TGNSKGCGFVQFPDQRLQKLALEECQGAVGLGSKPLRLSLAANK 176
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGR-TKGYGFVRFGDESEQLRAM 233
T+++G+L + + + F +++ +++TGR GY FV DE+ R +
Sbjct: 3 TLWMGNLEPYMDENFITRAFGTMGELVVSVRIIRNKMTGRGAAGYCFVELTDEATAERCL 62
Query: 234 TEMNGVFC--STRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEH 291
++NG +T P R N+ T ++S + ++FVG+L V D
Sbjct: 63 RKVNGKALPGATPPRRF--KLNRATFGKQGESSPL---------YSLFVGDLTPEVDDGM 111
Query: 292 LRELF------SQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
L E F + G++V K CGFVQF D+ + AL G LG + +RLS
Sbjct: 112 LYEFFYNRYPSCRGGKVVLDGTGNSKGCGFVQFPDQRLQKLALEECQGAVGLGSKPLRLS 171
Query: 345 WGRSPSNKQAQPDPNQWNAGYYGYAQGYENY 375
+ + + Q D W + GY +Y
Sbjct: 172 LAANKT-RHNQSDNRGWGSHGGGYRHNQYDY 201
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 276 TTVFVGNLDSIVTDEHLRELFSQYGQLV-HVKIPAGKRCG-------FVQFADRSCAEEA 327
+T+++GNL+ + + + F G+LV V+I K G FV+ D + AE
Sbjct: 2 STLWMGNLEPYMDENFITRAFGTMGELVVSVRIIRNKMTGRGAAGYCFVELTDEATAERC 61
Query: 328 LRMLNGTQLGGQN--IRLSWGRSPSNKQAQPDP 358
LR +NG L G R R+ KQ + P
Sbjct: 62 LRKVNGKALPGATPPRRFKLNRATFGKQGESSP 94
>gi|302409198|ref|XP_003002433.1| nucleolysin TIA-1 [Verticillium albo-atrum VaMs.102]
gi|261358466|gb|EEY20894.1| nucleolysin TIA-1 [Verticillium albo-atrum VaMs.102]
Length = 443
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 143/306 (46%), Gaps = 33/306 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L+IG L + E L F TG V VK+I +K + YGF+E+ A R +Q
Sbjct: 52 RALYIGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNQ-KGYNYGFVEYDDPGAAARAMQ 110
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 111 TLNGRRV----HEIRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDEILSQAFAA-FGS 165
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D TGR++GYGFV F D + +A++ M+G + +R +R A K S +
Sbjct: 166 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 225
Query: 261 YQNSQVAQS------------------------DDDPN-NTTVFVGNLDSIVTDEHLREL 295
Q + A PN TTV+VGNL T + L
Sbjct: 226 QQQAMQAMGMTPTTPFGHHQFPAHGMASYEVILAQTPNWQTTVYVGNLTPYTTPNDVVPL 285
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS-NKQA 354
F +G +V + A + F++ A A+ +NG + G+ ++ SWG+ + N
Sbjct: 286 FQNFGFVVESRFQADRGFAFIKMESHEAAAMAICQMNGYNVNGRPLKCSWGKDKTPNAAG 345
Query: 355 QPDPNQ 360
DP Q
Sbjct: 346 GFDPAQ 351
>gi|296081803|emb|CBI20808.3| unnamed protein product [Vitis vinifera]
Length = 397
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 146/292 (50%), Gaps = 30/292 (10%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + E L F G + K+IR ++ YGF++++ RA A +
Sbjct: 18 CRSVYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKDKSS----YGFVDYLDRASASLAI 73
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
T +G + Q ++NWA + +G++ D + IFVGDL+ +VTD L F + S
Sbjct: 74 MTLHGRQVYG--QALKVNWA-YASGQREDTSGHFNIFVGDLSPEVTDATLYACFSV-FAS 129
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT-------- 252
A+V+ D TGR+KGYGFV F ++ + A+ +++G + R +R AT
Sbjct: 130 CSDARVMWDHKTGRSKGYGFVSFRNQQDAQSAINDLSGKWLGNRQIRCNWATKGAGFNED 189
Query: 253 -----NKKTV-------SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 300
N+ V S +N+ +++P TTV+VGNL VT L F G
Sbjct: 190 KQVNENQNAVVLTNGSSDGSQENTNEEAPENNPAYTTVYVGNLSHEVTQAELHCQFHALG 249
Query: 301 QLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
V V+I K GFV++ A A++M NG + G++++ SWG P+
Sbjct: 250 AGVIEEVRIQRDKGFGFVRYHTHEEAALAIQMANGRIVRGKSMKCSWGSKPT 301
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 25/200 (12%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ +VT+ +L E F++ P + D+ YGFV + D +
Sbjct: 14 DSSSCRSVYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKDK-----SSYGFVDYLDRAS 68
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ ++G + +++ A Q +D + +FVG+L VT
Sbjct: 69 ASLAIMTLHGRQVYGQALKVNWAYAS------------GQREDTSGHFNIFVGDLSPEVT 116
Query: 289 DEHLRELFSQYGQLVHVKI------PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS + ++ K GFV F ++ A+ A+ L+G LG + IR
Sbjct: 117 DATLYACFSVFASCSDARVMWDHKTGRSKGYGFVSFRNQQDAQSAINDLSGKWLGNRQIR 176
Query: 343 LSWGRSPS--NKQAQPDPNQ 360
+W + N+ Q + NQ
Sbjct: 177 CNWATKGAGFNEDKQVNENQ 196
>gi|398407815|ref|XP_003855373.1| hypothetical protein MYCGRDRAFT_35430 [Zymoseptoria tritici IPO323]
gi|339475257|gb|EGP90349.1| hypothetical protein MYCGRDRAFT_35430 [Zymoseptoria tritici IPO323]
Length = 401
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 146/295 (49%), Gaps = 33/295 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG--YGFIEFISRAGAERV 139
R L++G L + E L F TG V VK+I +K Q +G YGF+E+ AER
Sbjct: 69 RALYVGGLDPRVTEDVLKQIFETTGHVQNVKIIPDKNF-QSKGFNYGFVEYDDPGAAERA 127
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + +Q R+NWA ++DT +H IFVGDL+ +V D +L + F A +
Sbjct: 128 MQTLNGRRV--HQQEIRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 184
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
+ A+V+ D TGR++GYGFV F D ++ +A++ M+G + +R +R A K S
Sbjct: 185 GTVSEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQKGQPS 244
Query: 259 ASYQNSQV--------------------AQSDD-----DPN-NTTVFVGNLDSIVTDEHL 292
S Q + V AQS + P TT +VGNL T L
Sbjct: 245 FSQQQAMVQMGMTPTTPYGGHHSFPTQGAQSYEMIVQQTPQWQTTCYVGNLTPYTTQNDL 304
Query: 293 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
LF +G + + + + F++ A A+ L+G Q+ G+ ++ SWG+
Sbjct: 305 VPLFQNFGYVTETRFQSDRGFAFIKMDTHENAANAICQLSGYQVNGRPLKCSWGK 359
>gi|224119532|ref|XP_002331184.1| predicted protein [Populus trichocarpa]
gi|222873305|gb|EEF10436.1| predicted protein [Populus trichocarpa]
Length = 426
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 152/295 (51%), Gaps = 30/295 (10%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L FA TG V K+IR +++ YGFI + R A
Sbjct: 54 PSTCRSVYVGNIHTQVTEPLLQEVFASTGPVEGCKLIRKEKSS----YGFIHYFDRRAAA 109
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ + NG + Q ++NWA + +G++ D + IFVGDL+ +VTD L F
Sbjct: 110 LAILSLNGRHLFG--QPIKVNWA-YASGQREDTSGHFNIFVGDLSPEVTDATLYACFSV- 165
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA------ 251
YPS A+V+ D+ TGR++G+GFV F ++ + A+ ++ G + +R +R A
Sbjct: 166 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAAKGASS 225
Query: 252 ------TNKKTV----SASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFS 297
++ K+V + + ++ + A +++ P N TTV+VGNL V L F
Sbjct: 226 NDDKQSSDSKSVVELTNGTSEDCKEATNNEAPENNPQYTTVYVGNLAPEVAQPDLHRHFH 285
Query: 298 QYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
G V V++ K GFV+F+ + A A++M N L G+ ++ SWG P+
Sbjct: 286 ALGAGVIEEVRVQRDKGFGFVRFSTHAEAALAIQMGNTQSLFGKQMKCSWGSKPT 340
>gi|255760009|ref|NP_001157550.1| nucleolysin TIA-1 isoform 2 [Mus musculus]
gi|28386187|gb|AAH46812.1| Tia1 protein [Mus musculus]
Length = 377
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 153/306 (50%), Gaps = 21/306 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + +T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALA 66
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 67 AMNGRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRI 123
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K S
Sbjct: 124 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKST 183
Query: 262 QNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
S Q S PNN TV+ G + S +T++ +R+ FS +GQ++ +++ K
Sbjct: 184 YESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYS 243
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ----PDPNQWNAG 364
FV+F+ A A+ +NGT + G ++ WG+ +P +Q Q P QW
Sbjct: 244 FVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPPTYGQWGQ- 302
Query: 365 YYGYAQ 370
+YG AQ
Sbjct: 303 WYGNAQ 308
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 19/184 (10%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMDVRTAGNDPYCFVEFHEHR 59
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
A+ MNG + +++ AT +Q D N+ VFVG+L +
Sbjct: 60 HAAAALAAMNGRKIMGKEVKVNWATTPS-----------SQKKDTSNHFHVFVGDLSPEI 108
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ I
Sbjct: 109 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 168
Query: 342 RLSW 345
R +W
Sbjct: 169 RTNW 172
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 84 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 143
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 144 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSS 201
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 202 PNNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFSSHESAA 254
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 255 HAIVSVNGT 263
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCA 324
+D T++VGNL VT+ + +LFSQ G + K+ R FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHA 61
Query: 325 EEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 62 AAALAAMNGRKIMGKEVKVNWATTPSSQK 90
>gi|406603569|emb|CCH44882.1| Negative growth regulatory protein NGR1 [Wickerhamomyces ciferrii]
Length = 641
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 115/196 (58%), Gaps = 12/196 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ--------TGQIEGYGFIEFISR 133
+TLW+GDL W DE + ++ G+ V VK+I+ K+ TG GY FIEF +
Sbjct: 77 KTLWMGDLDPWSDEDAIVHLWSTLGKRVLVKLIKAKKGTPAATLNTGHA-GYCFIEFETY 135
Query: 134 AGAERVLQTFNGTPMPNGEQNFRLNWASFGA-GEKRDDTPDHTIFVGDLAADVTDYMLQE 192
A+ L + NG+ +PN + FRLNWAS +P+ ++FVGDL+ T+ L
Sbjct: 136 DDAKSAL-SLNGSQIPNTNRLFRLNWASGATLSSPIPQSPEFSLFVGDLSPSTTEAHLLA 194
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F+ + S K +V+ D +TG ++ +GFVRF DE E+ RA+TEM GV+C+ RP+R+ AT
Sbjct: 195 LFQTHFKSVKTVRVMTDPITGTSRCFGFVRFSDEEERRRALTEMQGVWCAGRPLRVALAT 254
Query: 253 NKKTVSASYQ-NSQVA 267
+ + + Q NS +A
Sbjct: 255 PRNQSNQTNQTNSLIA 270
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 54/82 (65%)
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
DP NTTVF+G L + ++ L LF +G + HVKIP GK CGF++F R AE A+ +
Sbjct: 383 DPTNTTVFIGGLAPGIPEQTLAALFQPFGNITHVKIPPGKGCGFIRFDKREDAEAAIAGM 442
Query: 332 NGTQLGGQNIRLSWGRSPSNKQ 353
G Q+GG +RLSWGR+ + +Q
Sbjct: 443 QGFQIGGSRVRLSWGRAQNQQQ 464
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 95/229 (41%), Gaps = 38/229 (16%)
Query: 164 AGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRT-------- 215
A + +P T+++GDL D E ST G +V++ + +
Sbjct: 67 ATSQTSSSPPKTLWMGDL-----DPWSDEDAIVHLWSTLGKRVLVKLIKAKKGTPAATLN 121
Query: 216 ---KGYGFVRFGDESEQLRAMTEMNG--VFCSTRPMRIGPATNKKTVSASYQNSQVAQSD 270
GY F+ F + + ++ +NG + + R R+ A S + +S + QS
Sbjct: 122 TGHAGYCFIEF-ETYDDAKSALSLNGSQIPNTNRLFRLNWA------SGATLSSPIPQSP 174
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK------IPAGKRC-GFVQFADRSC 323
+ ++FVG+L T+ HL LF + + V I RC GFV+F+D
Sbjct: 175 E----FSLFVGDLSPSTTEAHLLALFQTHFKSVKTVRVMTDPITGTSRCFGFVRFSDEEE 230
Query: 324 AEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD-PNQWNAGYYGYAQG 371
AL + G G+ +R++ +P N+ Q + N AG G G
Sbjct: 231 RRRALTEMQGVWCAGRPLRVALA-TPRNQSNQTNQTNSLIAGLNGLNLG 278
>gi|148666754|gb|EDK99170.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_d
[Mus musculus]
Length = 385
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 153/306 (50%), Gaps = 21/306 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + +T + Y F+EF A L
Sbjct: 15 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALA 74
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 75 AMNGRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRI 131
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K S
Sbjct: 132 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKST 191
Query: 262 QNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
S Q S PNN TV+ G + S +T++ +R+ FS +GQ++ +++ K
Sbjct: 192 YESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYS 251
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ----PDPNQWNAG 364
FV+F+ A A+ +NGT + G ++ WG+ +P +Q Q P QW
Sbjct: 252 FVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPPTYGQWGQ- 310
Query: 365 YYGYAQ 370
+YG AQ
Sbjct: 311 WYGNAQ 316
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 19/184 (10%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 10 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMDVRTAGNDPYCFVEFHEHR 67
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
A+ MNG + +++ AT +Q D N+ VFVG+L +
Sbjct: 68 HAAAALAAMNGRKIMGKEVKVNWATTPS-----------SQKKDTSNHFHVFVGDLSPEI 116
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ I
Sbjct: 117 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 176
Query: 342 RLSW 345
R +W
Sbjct: 177 RTNW 180
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 92 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 151
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 152 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSS 209
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 210 PNNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFSSHESAA 262
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 263 HAIVSVNGT 271
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCA 324
+D T++VGNL VT+ + +LFSQ G + K+ R FV+F + A
Sbjct: 10 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHA 69
Query: 325 EEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 70 AAALAAMNGRKIMGKEVKVNWATTPSSQK 98
>gi|30695647|ref|NP_849806.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
gi|332194923|gb|AEE33044.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
Length = 430
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 155/320 (48%), Gaps = 43/320 (13%)
Query: 67 GVAVPPQQQ----------GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRN 116
GV PPQ + P R+++ G++ + E L FA TG + + K+IR
Sbjct: 38 GVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRK 97
Query: 117 KQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTI 176
++ YGF+ + R A + T NG + Q ++NWA + G++ D + I
Sbjct: 98 DKSS----YGFVHYFDRRCASMAIMTLNGRHIFG--QPMKVNWA-YATGQREDTSSHFNI 150
Query: 177 FVGDLAADVTDYMLQETFRARYPST---KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
FVGDL+ +VTD L ++F A + + A+V+ D+ TGR++G+GFV F ++ + A+
Sbjct: 151 FVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKTGRSRGFGFVSFRNQQDAQTAI 210
Query: 234 TEMNGVFCSTRPMRIGPATNKKT----------------VSASYQNSQVAQSDDDPNN-- 275
EMNG + S+R +R AT T + S ++ + ++D P N
Sbjct: 211 NEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAPENNP 270
Query: 276 --TTVFVGNLDSIVTDEHLRELFSQYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRML 331
TTV+VGNL VT L LF G V V++ K GFV++ A A++M
Sbjct: 271 QFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGFVRYNTHDEAALAIQMG 330
Query: 332 NGT-QLGGQNIRLSWGRSPS 350
N L + IR SWG P+
Sbjct: 331 NAQPFLFSRQIRCSWGNKPT 350
>gi|451847206|gb|EMD60514.1| hypothetical protein COCSADRAFT_29739 [Cochliobolus sativus ND90Pr]
Length = 506
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 162/360 (45%), Gaps = 54/360 (15%)
Query: 30 QQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEI-------- 81
Q PPP +P ++ PQ P T ++P + P GQPG +
Sbjct: 31 QHMPPPPLAPVII-----PQNNNPI--PTAISSPMSGNPMSP--TSGQPGYVPRRAAPEP 81
Query: 82 --RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE------GYGFIEFISR 133
R L++G L + E L F TG V +VK+I +K YGF+E+
Sbjct: 82 NKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDP 141
Query: 134 AGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQE 192
AER + T NG + N E R+NWA ++DT +H IFVGDL+ +V D +L +
Sbjct: 142 GAAERGMATLNGRRIHNNE--IRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQ 199
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F P ++ A+V+ D TGR++GYGFV F D ++ RA+ M+G + +R +R A
Sbjct: 200 AFSTFGPVSE-ARVMWDMKTGRSRGYGFVAFRDRADAERALNSMDGEWLGSRAIRCNWAN 258
Query: 253 NKKTVSASYQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIV 287
K S S Q + + QS D P TT +VGNL
Sbjct: 259 QKGQPSISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYT 318
Query: 288 TDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
+ L LF +G + + + + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 319 SQADLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 378
>gi|255576617|ref|XP_002529199.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223531377|gb|EEF33213.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 422
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 151/296 (51%), Gaps = 31/296 (10%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L FA TG V + K+IR +++ YGFI + R A
Sbjct: 49 PSTCRSVYVGNIHTQVTEPLLQEVFASTGPVESCKLIRKEKSS----YGFIHYFDRRSAA 104
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ + NG + Q ++NWA + +G++ D + + IFVGDL+ +VTD L F
Sbjct: 105 LAILSLNGRHLFG--QPIKVNWA-YASGQREDTSGHYNIFVGDLSPEVTDATLFACFSV- 160
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
Y S A+V+ D+ TGR++G+GFV F ++ + A+ ++ G + +R +R AT T
Sbjct: 161 YHSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGATS 220
Query: 258 SASYQNS-----------------QVAQSDDDPNN---TTVFVGNLDSIVTDEHLRELFS 297
+ Q+S + A +D NN TTV+VGNL VT L F
Sbjct: 221 NDDKQSSDAKSVVELTNGSSEEGKETANNDAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 280
Query: 298 QYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 350
G V V++ K GFV+F+ + A A++M N + L G+ I+ SWG P+
Sbjct: 281 SLGAGVIEEVRVQRDKGFGFVRFSTHAEAALAIQMGNTQSILYGKQIKCSWGSKPT 336
>gi|260830993|ref|XP_002610444.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
gi|229295810|gb|EEN66454.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
Length = 1022
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 141/275 (51%), Gaps = 10/275 (3%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E + F G + K+I ++ G + Y F+EF A L
Sbjct: 114 RTLYVGNLSRQVTEQLILQLFGAIGPCKSCKMI-SEHAGN-DPYCFVEFYDHNHASAALT 171
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + + E ++NWA+ +G K+D + H +FVGDL+ ++ L+ F A +
Sbjct: 172 AMNGRKIMHKE--VKVNWATTPSGNKKDTSNHHHVFVGDLSPEIDTTDLKAAF-APFGKI 228
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+VV D T +++GYGFV F ++ + A+ M+G + R +R AT K S
Sbjct: 229 SDARVVRDAQTAKSRGYGFVSFVNKVDAENAIGAMSGQWLGGRAIRTNWATRKPPPPKSN 288
Query: 262 QNSQVAQSDD-----DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFV 316
+ + D+ P NTTV+ G + +T++ +R FS +G + +++ K F+
Sbjct: 289 EGQKQLSYDEVLCQASPTNTTVYCGGITKGLTEDLMRNTFSNFGPIQEIRVFPEKGYSFI 348
Query: 317 QFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 351
+F A A+ +NGTQ+ GQ ++ SWG+ S+
Sbjct: 349 RFFSHEVAAMAIVTVNGTQIEGQAVKCSWGKESSD 383
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D++ T++VG+L+ VT+ ++ + F A P K K++ + Y FV F D +
Sbjct: 109 DESRPRTLYVGNLSRQVTEQLILQLFGAIGP-CKSCKMISEH--AGNDPYCFVEFYDHNH 165
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+T MNG K V ++ + D N+ VFVG+L +
Sbjct: 166 ASAALTAMNGR-----------KIMHKEVKVNWATTPSGNKKDTSNHHHVFVGDLSPEID 214
Query: 289 DEHLRELFSQYGQLVHVKI------PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
L+ F+ +G++ ++ + GFV F ++ AE A+ ++G LGG+ IR
Sbjct: 215 TTDLKAAFAPFGKISDARVVRDAQTAKSRGYGFVSFVNKVDAENAIGAMSGQWLGGRAIR 274
Query: 343 LSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGG 391
+W + K P N+ G Q + A+P + ++Y GG
Sbjct: 275 TNWA---TRKPPPPKSNE------GQKQLSYDEVLCQASPTNTTVYCGG 314
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 270 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG-----FVQFADRSCA 324
+D+ T++VGNL VT++ + +LF G K+ + G FV+F D + A
Sbjct: 108 EDESRPRTLYVGNLSRQVTEQLILQLFGAIGPCKSCKM-ISEHAGNDPYCFVEFYDHNHA 166
Query: 325 EEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ + ++++W +PS +
Sbjct: 167 SAALTAMNGRKIMHKEVKVNWATTPSGNK 195
>gi|403416100|emb|CCM02800.1| predicted protein [Fibroporia radiculosa]
Length = 433
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 150/299 (50%), Gaps = 36/299 (12%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRAAETALQ 76
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D + + +FVGDL+ +V D +L + F A + +
Sbjct: 77 TLNGRKIFDTE--IRVNWAYQGQQNKEDTSNHYHVFVGDLSPEVNDEVLGKAFSA-FGTL 133
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA-- 259
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A N+KT
Sbjct: 134 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA-NQKTQGGPS 192
Query: 260 ------------------------SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 295
SY+ S V Q+ NTTV+VGNL T L L
Sbjct: 193 PTMPGRPSGMGGAPAPINFQGGPLSYE-SVVQQTP--AYNTTVYVGNLVPYCTQADLIPL 249
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 354
F G L +++ A + FV+ A A+ L G + G+ I+ SWG+ ++ A
Sbjct: 250 FQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGTA 308
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 273 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADRSCAE 325
P ++VGNL VT+ L E+F+ G + HVKI G GFV++ D AE
Sbjct: 13 PRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAE 72
Query: 326 EALRMLNGTQLGGQNIRLSW 345
AL+ LNG ++ IR++W
Sbjct: 73 TALQTLNGRKIFDTEIRVNW 92
>gi|297850132|ref|XP_002892947.1| hypothetical protein ARALYDRAFT_889143 [Arabidopsis lyrata subsp.
lyrata]
gi|297338789|gb|EFH69206.1| hypothetical protein ARALYDRAFT_889143 [Arabidopsis lyrata subsp.
lyrata]
Length = 419
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 148/296 (50%), Gaps = 31/296 (10%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L FA TG V + K+IR +++ YGF+ + R A
Sbjct: 50 PSTCRSVYVGNIHIQVTEPLLQEVFASTGPVESCKLIRKEKSS----YGFVHYFDRRSAG 105
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ + NG + Q ++NWA + +G++ D + IFVGDL+ +VTD ML F
Sbjct: 106 LAILSLNGRHLFG--QPIKVNWA-YASGQREDTSSHFNIFVGDLSPEVTDAMLFNCFSV- 161
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
YPS A+V+ D+ TGR++G+GFV F ++ + A+ E+ G + +R +R AT T
Sbjct: 162 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATS 221
Query: 258 SASYQNSQ----------VAQSDDDPNN----------TTVFVGNLDSIVTDEHLRELFS 297
Q+S V++ D N TTV+VGNL V+ L F
Sbjct: 222 GEDKQSSDSKSVVELTSGVSEDGKDTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFH 281
Query: 298 QYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 350
G V V++ K GFV+++ A A+ M N + L G+ ++ SWG P+
Sbjct: 282 SLGAGVIEEVRVQRDKGFGFVRYSTHVEAALAISMGNTHSYLSGRQMKCSWGSKPT 337
>gi|356565743|ref|XP_003551097.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 411
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 149/294 (50%), Gaps = 32/294 (10%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
R++++G++ + ++ L F+ G + K+IR +++ YGF+++ R+ A
Sbjct: 44 SCRSVYVGNIHPQVTDSLLQELFSTAGALEGCKLIRKEKSS----YGFVDYFDRSSAAFA 99
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+ T NG + Q ++NWA A +R+DT H IFVGDL+ +VTD L F Y
Sbjct: 100 IVTLNGRNIFG--QPIKVNWAY--ASSQREDTSGHFNIFVGDLSPEVTDATLYACFSV-Y 154
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
PS A+V+ D+ TGR++G+GFV F ++ + A+ ++ G + +R +R AT + S
Sbjct: 155 PSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGASAS 214
Query: 259 ASYQNS----------------QVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQ 298
Q S Q +DD P TTV+VGNL VT L + F
Sbjct: 215 DEKQTSDSRSVVELTNGSSEDGQETTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHS 274
Query: 299 Y--GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
G + V++ K GFV+++ + A A++M N L G+ I+ SWG P+
Sbjct: 275 LNAGTIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARILFGKPIKCSWGSKPT 328
>gi|358383610|gb|EHK21274.1| hypothetical protein TRIVIDRAFT_116557, partial [Trichoderma virens
Gv29-8]
Length = 466
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 147/309 (47%), Gaps = 38/309 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K + YGF+E+ AER +Q
Sbjct: 77 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNA-KGYNYGFVEYDDPGAAERAMQ 135
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 136 TLNGRRVHQSE--IRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDDILLQAFSA-FGS 192
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS-- 258
A+V+ D TGR++GYGFV F D + +A++ M+G + +R +R A K S
Sbjct: 193 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 252
Query: 259 --------------------------ASYQNSQVAQSDDDPN-NTTVFVGNLDSIVTDEH 291
ASY+ +AQ+ PN TT +VGNL T
Sbjct: 253 QQQAMQAMGMTPTTPFGHHQFPAHGIASYE-MILAQT---PNWQTTCYVGNLTPYTTPND 308
Query: 292 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 351
+ LF +G +V + A + F++ A A+ +NG + G+ ++ SWG+ +
Sbjct: 309 VVPLFQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWGKDKTP 368
Query: 352 KQAQPDPNQ 360
DP Q
Sbjct: 369 NSGSFDPQQ 377
>gi|66802614|ref|XP_635179.1| RNA recognition motif RNP-1 domain-containing protein
[Dictyostelium discoideum AX4]
gi|60463492|gb|EAL61677.1| RNA recognition motif RNP-1 domain-containing protein
[Dictyostelium discoideum AX4]
Length = 463
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 108/180 (60%), Gaps = 11/180 (6%)
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
D ++++GDLA DVTD L F+ RYPS + A+V++D TG ++GYGFV+F + E+ +A
Sbjct: 112 DLSLYIGDLATDVTDQQLMNAFQGRYPSVRSARVIMDSATGISRGYGFVKFASDVEKDKA 171
Query: 233 MTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDD----DPNNTTVFVGNLDSIVT 288
+ +MNG + + +P+++ T+K+ NSQ + D DPNNT ++V LD +
Sbjct: 172 LIDMNGFYINNKPIKVNNPTHKRL------NSQTSTIPDLTSTDPNNTAIYVSQLDHYID 225
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
+ L+ +F YG++ ++K+ K FV F +R AE A LN +G +++ WG++
Sbjct: 226 EGVLQTIFGAYGEISYIKMLTNKFSAFVNFVNRESAEAAFG-LNNFPVGNTRLKVQWGKN 284
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Query: 83 TLWIGDLQYWM-DETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+L+IGDL + D+ +N V + +VI + TG GYGF++F S ++ L
Sbjct: 114 SLYIGDLATDVTDQQLMNAFQGRYPSVRSARVIMDSATGISRGYGFVKFASDVEKDKALI 173
Query: 142 TFNG-----TPMP-NGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETF 194
NG P+ N + RLN + + P++T I+V L + + +LQ F
Sbjct: 174 DMNGFYINNKPIKVNNPTHKRLNSQTSTIPDLTSTDPNNTAIYVSQLDHYIDEGVLQTIF 233
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRF 223
A Y K++ ++ + FV F
Sbjct: 234 GA-YGEISYIKMLTNKFS------AFVNF 255
>gi|449302198|gb|EMC98207.1| hypothetical protein BAUCODRAFT_416441 [Baudoinia compniacensis
UAMH 10762]
Length = 479
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 144/294 (48%), Gaps = 32/294 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGY--GFIEFISRAGAERV 139
R L++G L + E L F TG V +VK+I +K Q +GY GF+E+ AER
Sbjct: 82 RALYVGGLDPRVTEDVLKQIFETTGHVQSVKIIPDKNF-QSKGYNYGFVEYDDPQCAERA 140
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
+QT NG + +Q R+NWA ++DT +H IFVGDL+ +V D +L + F A +
Sbjct: 141 MQTLNGRRV--HQQEIRVNWAYQSNTISKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 197
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
+ A+V+ D TGR++GYGFV F D + +A++ M+G + +R +R A K S
Sbjct: 198 GTVSEARVMWDMKTGRSRGYGFVSFRDRGDAEKALSSMDGEWLGSRAIRCNWANQKGQPS 257
Query: 259 ASYQNSQV-------------------AQSDD-----DPN-NTTVFVGNLDSIVTDEHLR 293
S + V AQS + P TT +VGNL T L
Sbjct: 258 YSQAQAMVQMGMTPTTPYGHHTFPTQGAQSFEMIVQQTPQWQTTCYVGNLTPYTTQNDLV 317
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
LF +G + + + + FV+ A A+ L+G + G+ ++ SWG+
Sbjct: 318 PLFQNFGYVTETRFHSDRGFAFVKMDTHENAANAICQLSGYNVNGRPLKCSWGK 371
>gi|409051430|gb|EKM60906.1| hypothetical protein PHACADRAFT_247129 [Phanerochaete carnosa
HHB-10118-sp]
Length = 425
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 167/356 (46%), Gaps = 62/356 (17%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 15 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRAAETALQ 73
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D T + +FVGDL+ +V D +L + F A + +
Sbjct: 74 TLNGRKIFDTE--IRVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEVLAKAFAA-FGTL 130
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA-- 259
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A N+KT A
Sbjct: 131 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA-NQKTQGAPP 189
Query: 260 ------------------------------SYQNSQVAQSDDDPNNTTVFVGNLDSIVTD 289
SY+ S V Q+ N+TV+VGNL T
Sbjct: 190 PRAGNGGNGSDGGHGGGGAPAPMNFQGGPLSYE-SVVQQT--PAYNSTVYVGNLVPYATQ 246
Query: 290 EHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP 349
L LF G L +++ A + FV+ A A+ L G + G+ I+ SWG+
Sbjct: 247 ADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDR 306
Query: 350 SNKQA------QPDPNQ---WNAGYYGYAQ--GYENYGYAAAAPQDPSMYYGGYPG 394
++ A P P N YG Q Y YG+ A YGG PG
Sbjct: 307 ADGGALTTGGMSPTPAAAPYGNMPMYGMPQPNSYGQYGFGA---------YGGAPG 353
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADRSC 323
+ P ++VGNL VT+ L E+F+ G + HVKI G GFV++ D
Sbjct: 8 EAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRA 67
Query: 324 AEEALRMLNGTQLGGQNIRLSW 345
AE AL+ LNG ++ IR++W
Sbjct: 68 AETALQTLNGRKIFDTEIRVNW 89
>gi|225444661|ref|XP_002276983.1| PREDICTED: nucleolysin TIAR isoform 1 [Vitis vinifera]
Length = 429
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 151/300 (50%), Gaps = 39/300 (13%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + E L F+ TG + K+IR +++ YGF+++ R A +
Sbjct: 53 CRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKSS----YGFVDYFDRRSAALSI 108
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
T NG + Q ++NWA A +R+DT H IFVGDL+ +VTD L F YP
Sbjct: 109 VTLNGRHLFG--QPIKVNWAY--ASSQREDTSGHYNIFVGDLSPEVTDATLFACFSV-YP 163
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG---------- 249
S A+V+ D+ TGR++G+GFV F ++ E A+ ++NG + +R +R
Sbjct: 164 SCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGRWLGSRQIRCNWATKGAGGNE 223
Query: 250 --PATNKKTVSA-----------SYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHL 292
P ++ K+V QN + +D+ P N TTV+VGNL VT L
Sbjct: 224 DKPNSDAKSVVELTNGTSGEVIYGIQNGKDKSNDEAPENNLQYTTVYVGNLAPEVTSVDL 283
Query: 293 RELFSQY--GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
F G + V++ K GFV+++ + A A++M N L G+ I+ SWG P+
Sbjct: 284 HRHFHALGAGAIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARILCGKPIKCSWGSKPT 343
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--GFVQFADRSCAEEAL 328
D +V+VGN+ VT+ L+E+FS G L K+ ++ GFV + DR A ++
Sbjct: 49 DSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKSSYGFVDYFDRRSAALSI 108
Query: 329 RMLNGTQLGGQNIRLSWGRSPSNKQ 353
LNG L GQ I+++W + S ++
Sbjct: 109 VTLNGRHLFGQPIKVNWAYASSQRE 133
>gi|170084123|ref|XP_001873285.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650837|gb|EDR15077.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 422
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 149/303 (49%), Gaps = 34/303 (11%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 13 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRAAETALQ 71
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D T + +FVGDL+ +V D +L + F A + +
Sbjct: 72 TLNGRKIFDTE--IRVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEVLAKAFSA-FGTM 128
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------K 255
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A K
Sbjct: 129 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPPT 188
Query: 256 TVSASYQNSQVAQSDDDPN---------------------NTTVFVGNLDSIVTDEHLRE 294
T ++S + + P N+TV+VGNL T L
Sbjct: 189 TTASSPRPGGAVTTGSAPAPINFQGGPLSYESVVQQTPAYNSTVYVGNLVPYCTQADLIP 248
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN-KQ 353
LF G L +++ A + FV+ A A+ L G + G+ I+ SWG+ ++
Sbjct: 249 LFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGGT 308
Query: 354 AQP 356
AQP
Sbjct: 309 AQP 311
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 25/196 (12%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDR-LTGRTKGYGFVRFGDESEQLRAMT 234
++VG+L+ VT+YML E F P + K++ DR YGFV + D A+
Sbjct: 13 LYVGNLSPRVTEYMLTEIFAVAGP-VQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 71
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
+NG +R V+ +YQ Q +D + VFVG+L V DE L +
Sbjct: 72 TLNGRKIFDTEIR---------VNWAYQGQQ--NKEDTTGHYHVFVGDLSPEVNDEVLAK 120
Query: 295 LFSQYGQLVHVKI----PAGKR--CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW--- 345
FS +G + ++ +GK GF+ F D++ AE+A+ +NG LG + IR++W
Sbjct: 121 AFSAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 180
Query: 346 ---GRSPSNKQAQPDP 358
G P+ + P P
Sbjct: 181 KTQGAPPTTTASSPRP 196
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADRSC 323
+ P ++VGNL VT+ L E+F+ G + HVKI G GFV++ D
Sbjct: 6 EAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRA 65
Query: 324 AEEALRMLNGTQLGGQNIRLSW 345
AE AL+ LNG ++ IR++W
Sbjct: 66 AETALQTLNGRKIFDTEIRVNW 87
>gi|150866410|ref|XP_001386002.2| hypothetical protein PICST_62299 [Scheffersomyces stipitis CBS
6054]
gi|149387666|gb|ABN67973.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 446
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 148/294 (50%), Gaps = 29/294 (9%)
Query: 84 LWIGDLQ-YWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+W+G L W +E+ N V+VK++R+K Y F+ F + + +Q
Sbjct: 85 IWMGGLDPTWTEESIANIWQTVGVPPVSVKIMRDKFNTTKPPYSFVTFANEKEVDTAVQK 144
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTP---------DHTIFVGDLAADVTDYMLQET 193
NG +P + F++N+A G + D+ +H+IF+GDLA DVT+ ++
Sbjct: 145 -NGLVIPGSARTFKINYAG-GPNSRYPDSSNSRQIAPKNEHSIFIGDLALDVTEDLIFAK 202
Query: 194 FRARYPS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F ++P K K++ D+ TG KG+GFVRF + + RA+ EMNGV +R +R+G A+
Sbjct: 203 FNTQFPGQVKQVKIMFDQQTGANKGFGFVRFTNIEIKNRALKEMNGVVVGSRAIRVGQAS 262
Query: 253 NKKTV--------SASYQNSQVAQSDD--------DPNNTTVFVGNLDSIVTDEHLRELF 296
+ S +++ S+V S DPNNTT+ + L S T++ L F
Sbjct: 263 GSNSGGFSSPAPESENHEISRVHLSQSQPALNQFTDPNNTTLSITGLSSKFTEDELALHF 322
Query: 297 SQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
+G +V K+ + ++F RS AE A+ L+G + NI ++WG+ S
Sbjct: 323 IAFGDIVACKLSDDLQSASIKFFSRSAAEWAVLFLHGAIINDCNISITWGKDSS 376
>gi|346319566|gb|EGX89167.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cordyceps militaris CM01]
Length = 450
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 141/299 (47%), Gaps = 30/299 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K YGF+E+ AER +Q
Sbjct: 70 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGFN-YGFVEYDDPGAAERAMQ 128
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT H IFVGDL+ +V D +L + F A + S
Sbjct: 129 TLNGRRVHQSE--IRVNWAYQSNTSGKEDTSGHFHIFVGDLSNEVNDEILTQAFSA-FGS 185
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK----- 255
A+V+ D TGR++GYGFV F D E +A++ M+G + +R +R A K
Sbjct: 186 VSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 245
Query: 256 ----------TVSASYQNSQ----------VAQSDDDPNNTTVFVGNLDSIVTDEHLREL 295
T + + + Q V + TTV+VGNL T + L
Sbjct: 246 QQQAMQAMGLTPTTPFGHHQFPTHGVGSYDVILAQTPTWQTTVYVGNLTPYTTPNDVVPL 305
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 354
F +G +V + A + F++ A A+ +NG + G+ ++ SWG+ ++ Q
Sbjct: 306 FQNFGFVVESRFQADRGFAFIKMDTHENASMAICQMNGYNVNGRPLKCSWGKDKTSNQG 364
>gi|356519889|ref|XP_003528601.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 422
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 149/296 (50%), Gaps = 31/296 (10%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L F+ TG V K+IR ++ YGFI + R A
Sbjct: 53 PSTCRSVYVGNIHTQVTEPLLQEVFSGTGPVEGCKLIRKDKSS----YGFIHYFDRRSAA 108
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ + NG + Q ++NWA + +G++ D + + IFVGDL+ +VTD L F
Sbjct: 109 LAILSLNGRHLFG--QPIKVNWA-YASGQREDTSGHYNIFVGDLSPEVTDATLFACFSV- 164
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
YPS A+V+ D+ TGR++G+GFV F ++ + ++ ++ G + +R +R AT
Sbjct: 165 YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSSINDLTGKWLGSRQIRCNWATKGAGG 224
Query: 258 SASYQNS-----------------QVAQSDDDPNN---TTVFVGNLDSIVTDEHLRELFS 297
+ QNS + + SD NN TTV+VGNL VT L F
Sbjct: 225 NEEKQNSDAKSVVELTNGSSEDGKETSNSDAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 284
Query: 298 QYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 350
G V V++ K GFV+++ + A A++M N + L G+ I+ SWG P+
Sbjct: 285 ALGAGVMEEVRVQRDKGFGFVRYSTHAEAALAIQMGNAQSLLCGKPIKCSWGSKPT 340
>gi|449662778|ref|XP_004205609.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Hydra
magnipapillata]
Length = 336
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 115/202 (56%), Gaps = 13/202 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTG-EVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G + MDE ++ FA+ G +V+AVK I NK T + Y F++F A VL
Sbjct: 8 LWMGSISADMDEKFIKEAFANMGFKVLAVKEIFNKTTSERATYCFVDFGDIKTAREVLIK 67
Query: 143 FNGTPMPNGE-QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG +P E + F+LN + +G G D ++++FVGD+ +DV D L + FR +YPS
Sbjct: 68 LNGESIPGIEGKKFKLNRSEYGRGSSHSDGIEYSLFVGDITSDVNDNHLLDFFRIKYPSV 127
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNKKT-VSA 259
+ AKVVID G KGYGFVRF +E E RA+TEM GV RP+R+ A K ++A
Sbjct: 128 RAAKVVIDE-KGSHKGYGFVRFFNEEEINRALTEMQGVKGLGQRPIRVNKAVKSKNPINA 186
Query: 260 SYQNSQVAQSDDDPNNTTVFVG 281
VA DPN TVF G
Sbjct: 187 ------VASGLMDPN--TVFPG 200
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 20/201 (9%)
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
T +++G ++AD+ + ++E F K + ++ T Y FV FGD
Sbjct: 3 TESSWLWMGSISADMDEKFIKEAFANMGFKVLAVKEIFNKTTSERATYCFVDFGDIKTAR 62
Query: 231 RAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDE 290
+ ++NG P K + S D ++FVG++ S V D
Sbjct: 63 EVLIKLNGESI--------PGIEGKKFKLNRSEYGRGSSHSDGIEYSLFVGDITSDVNDN 114
Query: 291 HLRELFS------QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQ-LGGQNIRL 343
HL + F + ++V + + K GFV+F + AL + G + LG + IR+
Sbjct: 115 HLLDFFRIKYPSVRAAKVVIDEKGSHKGYGFVRFFNEEEINRALTEMQGVKGLGQRPIRV 174
Query: 344 SWG---RSPSNKQAQ--PDPN 359
+ ++P N A DPN
Sbjct: 175 NKAVKSKNPINAVASGLMDPN 195
>gi|47207834|emb|CAF95099.1| unnamed protein product [Tetraodon nigroviridis]
Length = 286
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 105/177 (59%), Gaps = 8/177 (4%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ TLW+G+L +MDE ++ F+ GE V+V++IRNK TG GY F+E A AER
Sbjct: 1 MSTLWMGNLDSYMDEKFITRAFSTMGEQAVSVRIIRNKMTGGAMGYCFVEMSDEATAERC 60
Query: 140 LQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
L+ NG +P F+LN A+FG K+D +++FVGDL +V D ML E F R
Sbjct: 61 LRKINGKSLPGASPPTRFKLNRATFG---KQDVGQMYSLFVGDLTPEVDDGMLYEFFYNR 117
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATN 253
YPS +G KVV+D + G +KG GFV+F DE Q RA+ E G + +R+ A N
Sbjct: 118 YPSCRGGKVVLDSM-GNSKGCGFVQFPDERLQKRALDECQGAMGLGGKALRLSLAAN 173
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 94/207 (45%), Gaps = 31/207 (14%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKG-----AKVVIDRLTGRTKGYGFVRFGDESEQ 229
T+++G+L D + E F R ST G +++ +++TG GY FV DE+
Sbjct: 3 TLWMGNL-----DSYMDEKFITRAFSTMGEQAVSVRIIRNKMTGGAMGYCFVEMSDEATA 57
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTD 289
R + ++NG + P P T K A++ V Q ++FVG+L V D
Sbjct: 58 ERCLRKING---KSLP-GASPPTRFKLNRATFGKQDVGQM------YSLFVGDLTPEVDD 107
Query: 290 EHLRELF------SQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQ-LGGQNIR 342
L E F + G++V + K CGFVQF D + AL G LGG+ +R
Sbjct: 108 GMLYEFFYNRYPSCRGGKVVLDSMGNSKGCGFVQFPDERLQKRALDECQGAMGLGGKALR 167
Query: 343 LSWG----RSPSNKQAQPDPNQWNAGY 365
LS R+ +QA P Q + GY
Sbjct: 168 LSLAANNLRNRPPQQADSRPAQSSTGY 194
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 276 TTVFVGNLDSIVTDEHLRELFSQYG-QLVHVKIPAGKRCG------FVQFADRSCAEEAL 328
+T+++GNLDS + ++ + FS G Q V V+I K G FV+ +D + AE L
Sbjct: 2 STLWMGNLDSYMDEKFITRAFSTMGEQAVSVRIIRNKMTGGAMGYCFVEMSDEATAERCL 61
Query: 329 RMLNGTQLGGQN--IRLSWGRSPSNKQ 353
R +NG L G + R R+ KQ
Sbjct: 62 RKINGKSLPGASPPTRFKLNRATFGKQ 88
>gi|168027692|ref|XP_001766363.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682272|gb|EDQ68691.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 397
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 150/292 (51%), Gaps = 30/292 (10%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + E L F++ G + K+IR +++ YGF++++ A L
Sbjct: 55 CRSVYVGNIHTKVTEALLAEVFSNIGPLEGCKLIRKEKSS----YGFVDYLDHIYAAVAL 110
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
T NG + Q ++NWA + +G++ D T + +FVGDL+ +VTD L F YPS
Sbjct: 111 TTLNGRLIFG--QPIKVNWA-YASGQREDTTGHYNVFVGDLSPEVTDATLFAAF-CVYPS 166
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT-NKKTVSA 259
A+V+ D+ +GR++G+GFV F + E A++EM G + TR +R AT + SA
Sbjct: 167 CSDARVMWDQRSGRSRGFGFVSFRSQQEAENAISEMTGKWLGTRSIRCNWATKTNSSASA 226
Query: 260 SYQNS-------QVAQSDDDP---------NN---TTVFVGNLDSIVTDEHLRELFSQYG 300
N+ ++S+D P NN TTV+VGNL V L F G
Sbjct: 227 DETNNGGHAVGMNDSKSEDRPEGSAGDGPENNPQYTTVYVGNLAHEVNQGELHRWFHCMG 286
Query: 301 QLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
V V++ K GFV++ A A++ NG L G++++ SWG P+
Sbjct: 287 AGVIEDVRVQKDKGFGFVRYRTHEEAALAIQAANGRVLCGKSVKCSWGSKPT 338
>gi|259648115|dbj|BAI40365.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 144/285 (50%), Gaps = 19/285 (6%)
Query: 76 GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAG 135
G +TL++G+L + E +L T F G+V K+IR + Y F+EF
Sbjct: 2 GDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN---DPYAFLEFTCHTA 58
Query: 136 AERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETF 194
A L N + + E ++NWA+ + + DT +H IFVGDL+ ++ +L+E F
Sbjct: 59 AVTALAAMNKRVVLDKE--MKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF 116
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
A + ++V D T ++KGY FV F +++ A+ MNG + +R +R +T K
Sbjct: 117 -APFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRK 175
Query: 255 ---KTVSASYQNSQVAQ--------SDDDPNNTTVFVGNLDS-IVTDEHLRELFSQYGQL 302
K V+ +S+ A+ + P NTTV+ G S I+T+E ++ FSQ+GQ+
Sbjct: 176 PPAKGVNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQI 235
Query: 303 VHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
+++ K F++F + A A+ + T++ G ++ WG+
Sbjct: 236 QDIRVFRDKGYAFIRFTTKEAAAHAIGATHNTEISGHTVKCFWGK 280
>gi|357479379|ref|XP_003609975.1| RNA-binding protein [Medicago truncatula]
gi|355511030|gb|AES92172.1| RNA-binding protein [Medicago truncatula]
Length = 404
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 149/291 (51%), Gaps = 30/291 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + E L F+ G + K+IR +++ YGF+++ R+ A +
Sbjct: 46 RSVYVGNIHPQVSEPLLQELFSSAGALEGCKLIRKEKSS----YGFVDYFDRSSAAIAIV 101
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + Q+ ++NWA + G++ D + IFVGDL+ +VTD L F A Y S
Sbjct: 102 TLNGRNIFG--QSIKVNWA-YTRGQREDTSGHFHIFVGDLSPEVTDATLYACFSA-YSSC 157
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT--------- 252
A+V+ D+ TGR++G+GFV F ++ E A+ ++ G + +R +R AT
Sbjct: 158 SDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGKWLGSRQIRCNWATKGANMNGEN 217
Query: 253 ----NKKTVSASYQNSQVAQ---SDDDPNN----TTVFVGNLDSIVTDEHLRELFSQY-- 299
+K V + S+ AQ SDD P TTV+VGNL VT L F
Sbjct: 218 QSSESKSVVELTSGTSEEAQEMTSDDSPEKNPQYTTVYVGNLAPEVTSVDLHHHFHALGV 277
Query: 300 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
G + V++ K GFV+++ A A++M N L G+ I+ SWG P+
Sbjct: 278 GTIEDVRVQRDKGFGFVRYSTHGEAALAIQMGNTRFLFGKPIKCSWGSKPT 328
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 23/193 (11%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ V++ +LQE F S+ GA + YGFV + D S
Sbjct: 41 DSSTCRSVYVGNIHPQVSEPLLQELF-----SSAGALEGCKLIRKEKSSYGFVDYFDRSS 95
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ +NG + +++ A + Q +D + +FVG+L VT
Sbjct: 96 AAIAIVTLNGRNIFGQSIKVNWAYTR------------GQREDTSGHFHIFVGDLSPEVT 143
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ ++ G FV F ++ A+ A+ L G LG + IR
Sbjct: 144 DATLYACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGKWLGSRQIR 203
Query: 343 LSWGRSPSNKQAQ 355
+W +N +
Sbjct: 204 CNWATKGANMNGE 216
>gi|340522219|gb|EGR52452.1| predicted protein [Trichoderma reesei QM6a]
Length = 477
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 147/309 (47%), Gaps = 38/309 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K + YGF+E+ AER +Q
Sbjct: 75 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNA-KGYNYGFVEYDDPGAAERAMQ 133
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 134 TLNGRRVHQSE--IRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDDILMQAFSA-FGS 190
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS-- 258
A+V+ D TGR++GYGFV F D + +A++ M+G + +R +R A K S
Sbjct: 191 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 250
Query: 259 --------------------------ASYQNSQVAQSDDDPN-NTTVFVGNLDSIVTDEH 291
ASY+ +AQ+ PN TT +VGNL T
Sbjct: 251 QQQAMQAMGMTPTTPFGHHQFPAHGVASYE-MILAQT---PNWQTTCYVGNLTPYTTPND 306
Query: 292 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 351
+ LF +G ++ + A + F++ A A+ +NG + G+ ++ SWG+ +
Sbjct: 307 VVPLFQNFGFVMESRFQADRGFAFIKMDSHENAAMAICQMNGYNVNGRPLKCSWGKDKAP 366
Query: 352 KQAQPDPNQ 360
DP Q
Sbjct: 367 NSGSFDPQQ 375
>gi|347840237|emb|CCD54809.1| hypothetical protein [Botryotinia fuckeliana]
Length = 218
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 93/183 (50%), Gaps = 37/183 (20%)
Query: 207 VIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS------ 260
+ D ++G ++GYGFVRF +E +Q RA+TEM GV+C RPMRI AT K +
Sbjct: 1 MTDPISGMSRGYGFVRFAEEGDQQRALTEMQGVYCGNRPMRISTATPKNKSGGAGPAGMQ 60
Query: 261 -------------------------------YQNSQVAQSDDDPNNTTVFVGNLDSIVTD 289
Y Q DPNNTTVFVG L VT+
Sbjct: 61 MQGGGGGGMPGAMGGAPGMYGMGGGPPMAGYYGTPQPMNQFTDPNNTTVFVGGLSGYVTE 120
Query: 290 EHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP 349
+ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWGRS
Sbjct: 121 DELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQ 180
Query: 350 SNK 352
+N
Sbjct: 181 NNS 183
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L ++ E L + F GE+ VK+ K G GF++F+ R AE +
Sbjct: 108 TVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVQRHAAEMAINQ 161
Query: 143 FNGTPMPNGEQNFRLNWA 160
G P+ G RL+W
Sbjct: 162 MQGYPI--GNSRVRLSWG 177
>gi|336376899|gb|EGO05234.1| hypothetical protein SERLA73DRAFT_44756 [Serpula lacrymans var.
lacrymans S7.3]
Length = 523
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 149/300 (49%), Gaps = 33/300 (11%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 16 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRAAETALQ 74
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D T + +FVGDL+ +V D +L + F A + +
Sbjct: 75 TLNGRKIFDTE--IRVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEILGKAFSA-FGTM 131
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A K S +
Sbjct: 132 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSVAV 191
Query: 262 Q------------------------NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 297
+S V Q+ N+TV+VGNL T L LF
Sbjct: 192 ASPPRPGATGGAPAPINFQGGPLSYDSVVQQTPS--YNSTVYVGNLVPYCTQADLIPLFQ 249
Query: 298 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN-KQAQP 356
G L +++ A + FV+ A A+ L G + G+ I+ SWG+ ++ AQP
Sbjct: 250 SIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGTTAQP 309
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADRSC 323
+ P ++VGNL VT+ L E+F+ G + HVKI G GFV++ D
Sbjct: 9 EAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRA 68
Query: 324 AEEALRMLNGTQLGGQNIRLSW 345
AE AL+ LNG ++ IR++W
Sbjct: 69 AETALQTLNGRKIFDTEIRVNW 90
>gi|291228731|ref|XP_002734335.1| PREDICTED: tRNA selenocysteine associated protein 1-like
[Saccoglossus kowalevskii]
Length = 303
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 120/187 (64%), Gaps = 8/187 (4%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
++W+GDL+ +MDE ++ FA GE V+ VK+IRNK T +GY F++F S A+ +L+
Sbjct: 4 SVWMGDLEPYMDEAFVIEAFASVGEKVLNVKIIRNKYTRIPQGYCFVDFGSDEIAKAILR 63
Query: 142 TFNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
+NG P+P N + F+LN+A++G + +P+ ++FVG+L +V + L E F RY
Sbjct: 64 KYNGKPLPGSNNSKRFKLNFAAYGQSYQ---SPEFSLFVGELTPEVDNCALHEFFAKRYY 120
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNKKTVS 258
+ K A VV+D + G ++GYGFVRF +E +Q RA+ EMN V + +++ AT K+ ++
Sbjct: 121 TCKAANVVLDPM-GHSRGYGFVRFSNEEDQQRALIEMNQVTGLGGKSIKVALATPKRPIT 179
Query: 259 ASYQNSQ 265
A ++Q
Sbjct: 180 AVQSSTQ 186
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 25/181 (13%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++++GDL + + + E F + K++ ++ T +GY FV FG + +
Sbjct: 4 SVWMGDLEPYMDEAFVIEAFASVGEKVLNVKIIRNKYTRIPQGYCFVDFGSDEIAKAILR 63
Query: 235 EMNGVFCSTRPMRIGPATNK----KTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDE 290
+ NG +P+ P +N K A+Y QS P ++FVG L V +
Sbjct: 64 KYNG-----KPL---PGSNNSKRFKLNFAAY-----GQSYQSP-EFSLFVGELTPEVDNC 109
Query: 291 HLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLN-GTQLGGQNIRL 343
L E F++ +V + + GFV+F++ + AL +N T LGG++I++
Sbjct: 110 ALHEFFAKRYYTCKAANVVLDPMGHSRGYGFVRFSNEEDQQRALIEMNQVTGLGGKSIKV 169
Query: 344 S 344
+
Sbjct: 170 A 170
>gi|357148481|ref|XP_003574781.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 452
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 150/299 (50%), Gaps = 35/299 (11%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E+ L F +G V K+IR +++ +GF+++ R A
Sbjct: 73 PSTCRSVYVGNVHPNVTESLLIEVFQSSGPVERCKLIRKEKSS----FGFVDYYDRRSAA 128
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRA 196
+ + +G + Q ++NWA A +R+DT H IFVGDL+++V D L F
Sbjct: 129 LAIMSLHGRHIYG--QAIKVNWAY--ASTQREDTSGHFHIFVGDLSSEVNDATLYACFSV 184
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA----- 251
Y S A+V+ D TGR++GYGFV F ++ E A+TEM G + +R +R A
Sbjct: 185 -YTSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNA 243
Query: 252 --------------TNKKTVSASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLR 293
TN + +A+ + +Q S ++P N TTV+VGNL V + L
Sbjct: 244 EEKQETDNHNAVVLTNGSSSNAAMEGNQETGSKENPENNPDFTTVYVGNLGHEVNRDELH 303
Query: 294 ELFSQY--GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
F G + V++ K GFV++ A A++M NG + G+ I+ SWG P+
Sbjct: 304 RHFYNLGVGAIEEVRVQQDKGFGFVRYNTHGEAALAIQMANGLVIRGKPIKCSWGNKPT 362
>gi|384491350|gb|EIE82546.1| hypothetical protein RO3G_07251 [Rhizopus delemar RA 99-880]
Length = 348
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 142/280 (50%), Gaps = 18/280 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQI--EGYGFIEFISRAGAERVL 140
T+++G+L + +T LN F G+VV+VK+I ++ YGF+EF AE+ +
Sbjct: 19 TIYVGNLDQRVTDTMLNEIFTTVGQVVSVKIISVRKHNNFGAVNYGFVEFADPRVAEQAI 78
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAG-------EKRDDTPDHTIFVGDLAADVTDYMLQET 193
Q NG + N E R NWA A K D T +FVGDLAA++ D L +
Sbjct: 79 QDMNGRKIFNYE--IRANWAQPSANINPPLQMTKEDTTNHFHVFVGDLAAEINDEKLAQA 136
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F + + + A V+ D L+G+++G+GFV F D+++ RA+ MNG + TRP+R AT
Sbjct: 137 F-SEFGTMSEAHVMWDPLSGKSRGFGFVAFRDKTDAERAIATMNGEWLGTRPIRCNWATQ 195
Query: 254 K-KTVSASYQNSQ-----VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 307
K +T + Q Q V T+++VGN+ V+ L + F ++G + VK
Sbjct: 196 KGQTAMPAPQPGQQLPYEVVVQQTPAYVTSIYVGNIPLNVSQNDLVQPFQRFGYVQEVKF 255
Query: 308 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
A + FV+ A A+ L + G +LSWG+
Sbjct: 256 QADRGFAFVKMDTHENAANAIVHLQNMSINGNVTKLSWGK 295
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 21/187 (11%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTK------GYGFVRFGD 225
P TI+VG+L VTD ML E F +T G V + ++ R YGFV F D
Sbjct: 16 PATTIYVGNLDQRVTDTMLNEIF-----TTVGQVVSVKIISVRKHNNFGAVNYGFVEFAD 70
Query: 226 ESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDS 285
+A+ +MNG +R A ++ Q ++ +D N+ VFVG+L +
Sbjct: 71 PRVAEQAIQDMNGRKIFNYEIRANWAQPSANINPPLQMTK----EDTTNHFHVFVGDLAA 126
Query: 286 IVTDEHLRELFSQYGQLVHVKI----PAGKR--CGFVQFADRSCAEEALRMLNGTQLGGQ 339
+ DE L + FS++G + + +GK GFV F D++ AE A+ +NG LG +
Sbjct: 127 EINDEKLAQAFSEFGTMSEAHVMWDPLSGKSRGFGFVAFRDKTDAERAIATMNGEWLGTR 186
Query: 340 NIRLSWG 346
IR +W
Sbjct: 187 PIRCNWA 193
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 10/103 (9%)
Query: 257 VSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--- 313
+SA S VA++ + TT++VGNLD VTD L E+F+ GQ+V VKI + ++
Sbjct: 1 MSAMDVTSNVAETTNPA--TTIYVGNLDQRVTDTMLNEIFTTVGQVVSVKIISVRKHNNF 58
Query: 314 -----GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 351
GFV+FAD AE+A++ +NG ++ IR +W + +N
Sbjct: 59 GAVNYGFVEFADPRVAEQAIQDMNGRKIFNYEIRANWAQPSAN 101
>gi|330933733|ref|XP_003304275.1| hypothetical protein PTT_16807 [Pyrenophora teres f. teres 0-1]
gi|311319203|gb|EFQ87630.1| hypothetical protein PTT_16807 [Pyrenophora teres f. teres 0-1]
Length = 485
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 143/314 (45%), Gaps = 45/314 (14%)
Query: 76 GQPGEI----------RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE-- 123
GQPG + R L++G L + E L F TG V +VK+I +K
Sbjct: 67 GQPGYVPRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFN 126
Query: 124 ----GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFV 178
YGF+E+ AER + T NG + N E R+NWA ++DT +H IFV
Sbjct: 127 SKGFNYGFVEYDDPGAAERGMATLNGRRIHNNE--IRVNWAYQSNNTAKEDTSNHFHIFV 184
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDL+ +V D +L + F P ++ A+V+ D TGR++GYGFV F D ++ RA++ M+G
Sbjct: 185 GDLSNEVNDEVLLQAFSTFGPVSE-ARVMWDMKTGRSRGYGFVAFRDRADADRALSSMDG 243
Query: 239 VFCSTRPMRIGPATNKKTVSASYQNSQVAQ-------------------------SDDDP 273
+ +R +R A K S S Q + + S
Sbjct: 244 EWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVSQTPA 303
Query: 274 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG 333
TT +VGNL + L LF +G + + + + F++ A A+ LNG
Sbjct: 304 WQTTCYVGNLTPYTSQSDLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMAICQLNG 363
Query: 334 TQLGGQNIRLSWGR 347
+ G+ ++ SWG+
Sbjct: 364 YNVNGRPLKCSWGK 377
>gi|126273035|ref|XP_001367894.1| PREDICTED: nucleolysin TIAR isoform 2 [Monodelphis domestica]
Length = 371
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 165/334 (49%), Gaps = 28/334 (8%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ GQP RTL++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 2 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYE 56
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQE 192
A L NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++
Sbjct: 57 HRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKS 114
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT
Sbjct: 115 AF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 173
Query: 253 NKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 305
K S Q + Q + P N TV+ G + S +TD+ +R+ FS +GQ++ +
Sbjct: 174 RKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEI 233
Query: 306 KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQ--AQPDPNQWN 362
++ K FV+F+ A A+ +NGT + G ++ WG+ SP + Q D +QW
Sbjct: 234 RVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWG 293
Query: 363 AGYYGYAQGYEN---YG-YAAAAPQDPSMYYGGY 392
++Q Y N YG Y A Q PS YG Y
Sbjct: 294 Q----WSQVYGNPQQYGQYMANGWQVPS--YGMY 321
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 83 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 142
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 143 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSS 200
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 201 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 253
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 254 HAIVSVNGT 262
>gi|351695933|gb|EHA98851.1| tRNA selenocysteine 1-associated protein 1 [Heterocephalus glaber]
Length = 262
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 106/162 (65%), Gaps = 6/162 (3%)
Query: 108 VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE--QNFRLNWASFGAG 165
V++VK+IRN+ TG GY F+EF A AE+ L NG P+P + F+LN+A++G
Sbjct: 5 VMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG-- 62
Query: 166 EKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGD 225
++ D++P++++FVGDL DV D ML E F YPS +G KVV+D+ TG +KGYGFV+F D
Sbjct: 63 KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGISKGYGFVKFTD 121
Query: 226 ESEQLRAMTEMNG-VFCSTRPMRIGPATNKKTVSASYQNSQV 266
E EQ RA+TE G V ++P+R+ A K + + SQ+
Sbjct: 122 ELEQKRALTECQGAVGLGSKPVRLSVAIPKASRVKPVEYSQM 163
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 18/153 (11%)
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM-RIGPATNKKTVS 258
+ K++ +RLTG GY FV F D + + + ++NG +P+ PA K
Sbjct: 4 TVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKING-----KPLPGATPAKRFKLNY 58
Query: 259 ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQY------GQLVHVKIPAGKR 312
A+Y Q D+ P ++FVG+L V D L E F + G++V + K
Sbjct: 59 ATYGK----QPDNSP-EYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGISKG 113
Query: 313 CGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
GFV+F D + AL G LG + +RLS
Sbjct: 114 YGFVKFTDELEQKRALTECQGAVGLGSKPVRLS 146
>gi|402079107|gb|EJT74372.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 482
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 164/361 (45%), Gaps = 36/361 (9%)
Query: 30 QQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPG-EIRTLWIGD 88
Q QPPP P P P A M +A + G P ++ P R L++G
Sbjct: 36 QMQPPPLHIP--QNTNPIPTAITSPMGGGDKSALMSPGGTSPFGRRTAPEPNKRALYVGG 93
Query: 89 LQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPM 148
L + E L F TG V VK+I +K YGF+E+ A+R +QT NG +
Sbjct: 94 LDARVTEDVLRQIFETTGHVQNVKIIPDKNAKGFN-YGFVEYDDPGAADRAMQTLNGRRV 152
Query: 149 PNGEQNFRLNWASFGAGEK-RDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKV 206
E R+NWA A ++DT +H IFVGDL+ +V D +L + F + S A+V
Sbjct: 153 HQSE--IRVNWAYQSANTTTKEDTSNHFHIFVGDLSNEVNDEVLTQAFSV-FGSVSEARV 209
Query: 207 VIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQV 266
+ D TGR++GYGFV F D + +A++ M+G + +R +R A K S + Q +
Sbjct: 210 MWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQ 269
Query: 267 A-------------------QSDDDPNN------TTVFVGNLDSIVTDEHLRELFSQYGQ 301
A QS + N TT +VGNL T L LF +G
Sbjct: 270 AMGMTPTTPYGHHHFPTHGMQSYEMVLNQTPAYQTTCYVGNLTPYTTANDLVPLFQNFGY 329
Query: 302 LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP--DPN 359
+V + + + F++ A A+ LNG + G+ ++ SWG+ + Q DP+
Sbjct: 330 VVESRFQSDRGFAFIKMDTHENATSAICNLNGYNVNGRPLKCSWGKDKNTASPQVGFDPS 389
Query: 360 Q 360
Q
Sbjct: 390 Q 390
>gi|18394471|ref|NP_564018.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
gi|9665134|gb|AAF97318.1|AC007843_21 Putative RNA binding protein [Arabidopsis thaliana]
gi|21553830|gb|AAM62923.1| oligouridylate binding protein, putative [Arabidopsis thaliana]
gi|111074422|gb|ABH04584.1| At1g17370 [Arabidopsis thaliana]
gi|332191458|gb|AEE29579.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
Length = 419
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 149/296 (50%), Gaps = 31/296 (10%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L FA TG V + K+IR +++ YGF+ + R A
Sbjct: 50 PSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKSS----YGFVHYFDRRSAG 105
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ + NG + Q ++NWA + +G++ D + IFVGDL+ +VTD ML F
Sbjct: 106 LAILSLNGRHLFG--QPIKVNWA-YASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSV- 161
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
YP+ A+V+ D+ TGR++G+GFV F ++ + A+ E+ G + +R +R AT T
Sbjct: 162 YPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATS 221
Query: 258 SASYQNSQ----------VAQSDDDPNN----------TTVFVGNLDSIVTDEHLRELFS 297
Q+S V++ D N TTV+VGNL V+ L F
Sbjct: 222 GEDKQSSDSKSVVELTSGVSEDGKDTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFH 281
Query: 298 QYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 350
G V V++ K GFV+++ A A++M N + L G+ ++ SWG P+
Sbjct: 282 SLGAGVIEEVRVQRDKGFGFVRYSTHVEAALAIQMGNTHSYLSGRQMKCSWGSKPT 337
>gi|193648018|ref|XP_001950341.1| PREDICTED: nucleolysin TIAR-like [Acyrthosiphon pisum]
Length = 388
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 141/275 (51%), Gaps = 15/275 (5%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E L F + G V A KVIR + + Y F+EF + +GA L
Sbjct: 8 RTLYVGNLDPSVTEELLCALFTNIGPVNACKVIREPGS---DPYAFLEFDTHSGAATALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
NG + E ++NWA+ + + DT +H IFVGDL+ ++ + L+E F A +
Sbjct: 65 AMNGRLFLDKE--MKVNWATTPGNQPKLDTSNHYHIFVGDLSPEIETHTLKEAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK---TV 257
++V D T ++KGY FV F +S+ A+ MNG + +R +R +T K
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKSDAENAINSMNGQWLGSRSIRTNWSTRKPPPPRA 181
Query: 258 SASYQNSQVAQSDD-----DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 312
Y + DD P N TV+ G + +T+E + ++FS++G +V ++ K
Sbjct: 182 PNKYSGYRAVTFDDVYNQSSPTNCTVYCGGIVEGLTEELVEQVFSRFGTIVEIRAFRDKG 241
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
F++F+ + A A+ ++ T++ G ++ WG+
Sbjct: 242 YAFIKFSTKEAATTAIEAVHNTEINGHPVKCFWGK 276
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 34/233 (14%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D++ T++VG+L VT+ +L F P KV+ R G + Y F+ F S
Sbjct: 3 DESNPRTLYVGNLDPSVTEELLCALFTNIGP-VNACKVI--REPG-SDPYAFLEFDTHSG 58
Query: 229 QLRAMTEMNGVFCSTRPMRIGPAT---NKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDS 285
A+ MNG + M++ AT N+ + D N+ +FVG+L
Sbjct: 59 AATALAAMNGRLFLDKEMKVNWATTPGNQPKL-------------DTSNHYHIFVGDLSP 105
Query: 286 IVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQ 339
+ L+E F+ +G++ + +I K FV F +S AE A+ +NG LG +
Sbjct: 106 EIETHTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKSDAENAINSMNGQWLGSR 165
Query: 340 NIRLSWG-RSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGG 391
+IR +W R P +A PN+ Y GY + Y ++P + ++Y GG
Sbjct: 166 SIRTNWSTRKPPPPRA---PNK----YSGYRAVTFDDVYNQSSPTNCTVYCGG 211
>gi|392597176|gb|EIW86498.1| hypothetical protein CONPUDRAFT_78829 [Coniophora puteana
RWD-64-598 SS2]
Length = 439
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 148/304 (48%), Gaps = 40/304 (13%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 19 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYLDMRAAETALQ 77
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D + +FVGDL+ +V D +L + F A + +
Sbjct: 78 TLNGRKIFDTE--IRVNWAYQGQQNKEDTSGHFHVFVGDLSPEVNDEVLAKAFAA-FGTM 134
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA-- 259
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A K +
Sbjct: 135 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPAV 194
Query: 260 -----------------------------SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDE 290
SY+ S V Q+ N+TV+VGNL T
Sbjct: 195 GAGAPAPRPGGGGGVGTAPAPINFQGGPLSYE-SVVQQTPS--YNSTVYVGNLVPYCTQA 251
Query: 291 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
L LF G L +++ A + FV+ A A+ L G + G+ I+ SWG+ +
Sbjct: 252 DLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRT 311
Query: 351 NKQA 354
+ QA
Sbjct: 312 DGQA 315
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 273 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADRSCAE 325
P ++VGNL VT+ L E+F+ G + HVKI G GFV++ D AE
Sbjct: 14 PRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYLDMRAAE 73
Query: 326 EALRMLNGTQLGGQNIRLSW 345
AL+ LNG ++ IR++W
Sbjct: 74 TALQTLNGRKIFDTEIRVNW 93
>gi|451997861|gb|EMD90326.1| hypothetical protein COCHEDRAFT_1106708 [Cochliobolus
heterostrophus C5]
Length = 455
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 145/314 (46%), Gaps = 45/314 (14%)
Query: 76 GQPGEI----------RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE-- 123
GQPG + R L++G L + E L F TG V +VK+I +K
Sbjct: 36 GQPGYVPRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFN 95
Query: 124 ----GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFV 178
YGF+E+ AER + T NG + N E R+NWA ++DT +H IFV
Sbjct: 96 SKGFNYGFVEYDDPGAAERGMATLNGRRIHNNE--IRVNWAYQSNNTAKEDTSNHFHIFV 153
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDL+ +V D +L + F P ++ A+V+ D TGR++GYGFV F D ++ RA+ M+G
Sbjct: 154 GDLSNEVNDEVLLQAFSTFGPVSE-ARVMWDMKTGRSRGYGFVAFRDRADAERALNSMDG 212
Query: 239 VFCSTRPMRIGPATNKKTVSASYQNSQVA-------------------QSDD-----DPN 274
+ +R +R A K S S Q + + QS D P
Sbjct: 213 EWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQ 272
Query: 275 -NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG 333
TT +VGNL + L LF +G + + + + F++ A A+ LNG
Sbjct: 273 WQTTCYVGNLTPYTSQADLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMAICQLNG 332
Query: 334 TQLGGQNIRLSWGR 347
+ G+ ++ SWG+
Sbjct: 333 YNVNGRPLKCSWGK 346
>gi|6996560|emb|CAB75429.1| oligouridylate binding protein [Nicotiana plumbaginifolia]
Length = 406
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 146/293 (49%), Gaps = 32/293 (10%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + E L FA TG + K+IR ++ YGF+++ R A +
Sbjct: 48 CRSVYVGNIHPQVTEPLLQEVFASTGPLEGCKLIRKDKSS----YGFVDYFDRRSAALAI 103
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
T NG + Q ++NWA A +R+DT +H IFVGDL+ +VTD L F Y
Sbjct: 104 VTLNGRHLFG--QPIKVNWAY--ASAQREDTSNHYNIFVGDLSPEVTDATLFACFSV-YT 158
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI-------GPAT 252
S A+V+ D+ TGR++G+GFV F ++ E A+ ++NG + +R +R G
Sbjct: 159 SCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGKWLGSRQIRCNWAAKGAGAVG 218
Query: 253 NKKTVSASYQNSQVAQSDD-------------DPNNTTVFVGNLDSIVTDEHLRELFSQY 299
+ + + S SDD +P TTV+VGNL VT L F
Sbjct: 219 EQNSDAKSVVELTSGTSDDGQEKVVNEDAPENNPQYTTVYVGNLAPEVTSVDLHRHFHAL 278
Query: 300 GQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
G V V+I K GFV+++ + A A+++ N L G+ ++ SWG P+
Sbjct: 279 GAGVIEDVRIQRDKGFGFVRYSSHAEAARAIQLGNARLLFGKPVKCSWGSKPT 331
>gi|255574179|ref|XP_002528005.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223532631|gb|EEF34417.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 417
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 145/293 (49%), Gaps = 32/293 (10%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + E L F G + K+IR ++ YGF+++ R+ A +
Sbjct: 38 CRSVYVGNIHVNVTEKLLAEVFQTAGPLAGCKLIRKDKSS----YGFVDYHDRSCAAVAI 93
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
T +G + Q ++NWA A +R+DT H IFVGDL+ +VTD L F Y
Sbjct: 94 MTLHGRQLYG--QALKVNWAY--ANSQREDTSGHFHIFVGDLSPEVTDATLFACFSV-YN 148
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI-----GPATNK 254
S A+V+ D TGR+KGYGFV F ++ E A+ +++G + R +R G A+N+
Sbjct: 149 SCSDARVMWDHKTGRSKGYGFVSFRNQREAQSAINDLSGKWLGNRQIRCNWATKGSASNE 208
Query: 255 KTVSASYQNSQVAQS-----------DDDPNN----TTVFVGNLDSIVTDEHLRELFSQY 299
QN+ + S +D P N TTV+VGNL VT L F
Sbjct: 209 DKQIGDNQNAVILTSGSSEGGQENANEDAPENNPAYTTVYVGNLCHEVTQSELHCQFHTL 268
Query: 300 GQ--LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
G + V++ K GFV++ A A++M NG + G+ ++ SWG P+
Sbjct: 269 GAGIIEEVRVQRDKGFGFVRYTTHEEAASAIQMANGKIVRGKPMKCSWGSKPT 321
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 25/200 (12%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ +VT+ +L E F+ P + D+ YGFV + D S
Sbjct: 34 DSSACRSVYVGNIHVNVTEKLLAEVFQTAGPLAGCKLIRKDK-----SSYGFVDYHDRSC 88
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ ++G + +++ A Y NS Q +D + +FVG+L VT
Sbjct: 89 AAVAIMTLHGRQLYGQALKVNWA---------YANS---QREDTSGHFHIFVGDLSPEVT 136
Query: 289 DEHLRELFSQYGQLVHVKI------PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ K GFV F ++ A+ A+ L+G LG + IR
Sbjct: 137 DATLFACFSVYNSCSDARVMWDHKTGRSKGYGFVSFRNQREAQSAINDLSGKWLGNRQIR 196
Query: 343 LSWGR--SPSNKQAQPDPNQ 360
+W S SN+ Q NQ
Sbjct: 197 CNWATKGSASNEDKQIGDNQ 216
>gi|255641747|gb|ACU21144.1| unknown [Glycine max]
Length = 397
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 150/292 (51%), Gaps = 32/292 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + ++ L F+ G + K+IR +++ YGF+++ R+ A +
Sbjct: 46 RSVYVGNIHPQVTDSLLQELFSTAGALEGCKLIRKEKSS----YGFVDYFDRSSAAFAIV 101
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + Q ++NWA A +R+DT H IFVGDL+ +VTD L F YPS
Sbjct: 102 TLNGRNIFG--QPIKVNWAY--ASSQREDTSGHFNIFVGDLSPEVTDATLYACFSV-YPS 156
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D+ TGR++G+GFV F ++ + A+ ++ G + +R +R AT + S
Sbjct: 157 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGASASDE 216
Query: 261 YQNS----------------QVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQY- 299
Q+S Q +DD P TTV+VGNL VT L + F
Sbjct: 217 KQSSDSKIVVELINGSSEEGQETTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSLN 276
Query: 300 -GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
G + V++ K GFV+++ + A A++M N L G+ I+ SWG P+
Sbjct: 277 AGIIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARILFGKPIKCSWGSKPT 328
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 26/198 (13%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VTD +LQE F ST GA + YGFV + D S
Sbjct: 41 DSSSCRSVYVGNIHPQVTDSLLQELF-----STAGALEGCKLIRKEKSSYGFVDYFDRSS 95
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ +NG +P+++ A Y +S Q +D + +FVG+L VT
Sbjct: 96 AAFAIVTLNGRNIFGQPIKVNWA---------YASS---QREDTSGHFNIFVGDLSPEVT 143
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ ++ GFV F ++ A+ A+ L G LG + IR
Sbjct: 144 DATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 203
Query: 343 LSW---GRSPSNKQAQPD 357
+W G S S+++ D
Sbjct: 204 CNWATKGASASDEKQSSD 221
>gi|331230317|ref|XP_003327823.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168138|ref|XP_003889766.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168140|ref|XP_003889767.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306813|gb|EFP83404.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167366|gb|EHS63397.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167367|gb|EHS63398.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 471
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 163/348 (46%), Gaps = 42/348 (12%)
Query: 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGA 136
G+ L++G+L + E L F+ G V VK+I RN Q G + YGF+E+ A
Sbjct: 106 GKRAHLYVGNLSPRVTEYMLQEIFSVAGPVQGVKIIPDRNFQHGGLN-YGFVEYYEMRSA 164
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWA--SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
E LQT G + + E R+NWA + + K D + + +FVGDL+ +V D +L + F
Sbjct: 165 ETALQTLGGRKIFDTE--IRVNWAYQNSQSNVKEDLSTHYHVFVGDLSPEVNDEVLAKAF 222
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
A + S A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A K
Sbjct: 223 AA-FGSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 281
Query: 255 KTVSASYQNSQVAQSDDDPN----------------------NTTVFVGNLDSIVTDEHL 292
A+ + +A NTTV+ GNL T L
Sbjct: 282 NQGMAATPGAVIAPGMGSGGMNRGGFGGATNYEAVVQQAPAYNTTVYTGNLVPYSTQADL 341
Query: 293 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR----- 347
LF +G +V +++ A + FV+ A A+ L GT + G+ ++ SWG+
Sbjct: 342 IPLFQGFGYIVEIRMQADRGFAFVKMDTHENAAMAIVNLTGTPVHGRPLKCSWGKDRASA 401
Query: 348 SPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGY 395
P++ A P AG YG Q Y PQ Y GYP Y
Sbjct: 402 DPNSAPASGMPMAPVAGMYGMPQMY-------GMPQAGYPQYSGYPQY 442
>gi|356547954|ref|XP_003542369.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 410
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 150/292 (51%), Gaps = 32/292 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + ++ L F+ G + K+IR +++ YGF+++ R+ A +
Sbjct: 46 RSVYVGNIHPQVTDSLLQELFSTAGALEGCKLIRKEKSS----YGFVDYFDRSSAAFAIV 101
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + Q ++NWA A +R+DT H IFVGDL+ +VTD L F YPS
Sbjct: 102 TLNGRNIFG--QPIKVNWAY--ASSQREDTSGHFNIFVGDLSPEVTDATLYACFSV-YPS 156
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D+ TGR++G+GFV F ++ + A+ ++ G + +R +R AT + S
Sbjct: 157 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGASASDE 216
Query: 261 YQNS----------------QVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQY- 299
Q+S Q +DD P TTV+VGNL VT L + F
Sbjct: 217 KQSSDSKIVVELINGSSEEGQETTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSLN 276
Query: 300 -GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
G + V++ K GFV+++ + A A++M N L G+ I+ SWG P+
Sbjct: 277 AGIIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARILFGKPIKCSWGSKPT 328
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 26/198 (13%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VTD +LQE F ST GA + YGFV + D S
Sbjct: 41 DSSSCRSVYVGNIHPQVTDSLLQELF-----STAGALEGCKLIRKEKSSYGFVDYFDRSS 95
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ +NG +P+++ A Y +S Q +D + +FVG+L VT
Sbjct: 96 AAFAIVTLNGRNIFGQPIKVNWA---------YASS---QREDTSGHFNIFVGDLSPEVT 143
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ ++ GFV F ++ A+ A+ L G LG + IR
Sbjct: 144 DATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 203
Query: 343 LSW---GRSPSNKQAQPD 357
+W G S S+++ D
Sbjct: 204 CNWATKGASASDEKQSSD 221
>gi|242021493|ref|XP_002431179.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
gi|212516428|gb|EEB18441.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
Length = 403
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 141/280 (50%), Gaps = 16/280 (5%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L T F+ G V K+IR + Y F+EF++ A L
Sbjct: 10 KTLYVGNLDVSVTEDLLCTLFSQIGSVKGCKIIREPNN---DPYAFVEFVNHQAASTALI 66
Query: 142 TFNGTPMPNGEQNFRLNWA-SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N + E+ ++NWA S G K+D + H IFVGDL+ ++ + L+E F A +
Sbjct: 67 AMNKRHVL--EKEIKVNWATSPGNQPKQDTSSHHHIFVGDLSPEIEMHTLREAF-APFGE 123
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----KT 256
++V D T ++KGY FV F ++E A+ MNG + R +R +T K +T
Sbjct: 124 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAESAIHAMNGQWLGNRSIRTNWSTRKPPPPRT 183
Query: 257 VSASYQNSQVAQSDD-----DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 311
+ N++ ++ P N TV+ G + + ++ + + FS++G + ++ K
Sbjct: 184 ERSRQGNAKAVSYEEVYNQSSPTNCTVYCGGFTNGINEDLIEKAFSRFGTIQDIRSFKDK 243
Query: 312 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 351
F++F+ + A A+ ++ ++ GQ ++ WG+ S+
Sbjct: 244 GYAFIRFSTKEAATHAIEAMHNAEINGQQVKCFWGKESSD 283
>gi|14714709|gb|AAH10496.1| Tial1 protein [Mus musculus]
gi|148685700|gb|EDL17647.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Mus musculus]
gi|149067624|gb|EDM17176.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_d [Rattus norvegicus]
Length = 375
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 156/315 (49%), Gaps = 20/315 (6%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ GQP RTL++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYE 57
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQE 192
A L NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++
Sbjct: 58 HRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKS 115
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT
Sbjct: 116 AF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 174
Query: 253 NKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 305
K S Q + Q + P N TV+ G + S +TD+ +R+ FS +GQ++ +
Sbjct: 175 RKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEI 234
Query: 306 KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPNQWN 362
++ K FV+F+ A A+ +NGT + G ++ WG+ SP + Q D +QW
Sbjct: 235 RVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWG 294
Query: 363 --AGYYGYAQGYENY 375
+ YG Q Y Y
Sbjct: 295 QWSQVYGNPQQYGQY 309
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 84 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 143
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 144 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSS 201
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 202 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 254
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 255 HAIVSVNGT 263
>gi|186478580|ref|NP_001117301.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
gi|332191459|gb|AEE29580.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
Length = 416
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 150/293 (51%), Gaps = 28/293 (9%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L FA TG V + K+IR +++ YGF+ + R A
Sbjct: 50 PSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKSS----YGFVHYFDRRSAG 105
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ + NG + Q ++NWA + +G++ D + IFVGDL+ +VTD ML F
Sbjct: 106 LAILSLNGRHLFG--QPIKVNWA-YASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSV- 161
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
YP+ A+V+ D+ TGR++G+GFV F ++ + A+ E+ G + +R +R AT T
Sbjct: 162 YPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATS 221
Query: 258 SASYQNS------QVAQSD-------DDPNN----TTVFVGNLDSIVTDEHLRELFSQYG 300
Q+S ++ D + P N TTV+VGNL V+ L F G
Sbjct: 222 GEDKQSSDSKSVVELTSGDGKDTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLG 281
Query: 301 QLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 350
V V++ K GFV+++ A A++M N + L G+ ++ SWG P+
Sbjct: 282 AGVIEEVRVQRDKGFGFVRYSTHVEAALAIQMGNTHSYLSGRQMKCSWGSKPT 334
>gi|328863696|gb|EGG12795.1| hypothetical protein MELLADRAFT_73862 [Melampsora larici-populina
98AG31]
Length = 477
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 164/373 (43%), Gaps = 64/373 (17%)
Query: 76 GQPGEIRT-LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFIS 132
G P R L++G+L + E L F+ G V VK+I RN Q G + YGF+E+
Sbjct: 101 GHPEAKRAHLYVGNLSPRVTEYMLQEIFSVAGSVQGVKIIPDRNFQHGGLN-YGFVEYYE 159
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWA---SFGAGEKRDDTPDHTIFVGDLAADVTDYM 189
AE LQT G + + E R+NWA S K D + +FVGDL+ +V D +
Sbjct: 160 MRSAETALQTLGGRKIFDNE--IRVNWAYQNSQQNAVKEDLSGHFHVFVGDLSPEVNDDV 217
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
L + F A + S A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+
Sbjct: 218 LAKAFAA-FGSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVN 276
Query: 250 PATNKK------------------------------TVSASYQNSQVAQSDDDPN-NTTV 278
A K NS A P N+TV
Sbjct: 277 WANQKNQGMPGAPGSAMGGGNMGGMNGGMNRAGGGGGGGGFGANSYEAVVQQAPAYNSTV 336
Query: 279 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 338
+ GNL T L LF +G +V +++ A + FV+ A A+ L GT + G
Sbjct: 337 YTGNLVPYCTQADLIPLFQGFGYIVEIRMQADRGFAFVKLDTHENAAMAIVNLTGTPVHG 396
Query: 339 QNIRLSWGRSPSNKQAQPDPNQWN---------AGYYGYAQGYENYGYAAAAPQDPSMYY 389
+ ++ SWG+ +A DPN AG YG Q Y P Y
Sbjct: 397 RPLKCSWGK----DRASADPNSATNPAMAMAPVAGMYGMPQMYGM----------PQPGY 442
Query: 390 GGYPGYGNYQQPQ 402
G YPGY Y PQ
Sbjct: 443 GQYPGYPQYGAPQ 455
>gi|4507499|ref|NP_003243.1| nucleolysin TIAR isoform 1 [Homo sapiens]
gi|194205608|ref|XP_001492932.2| PREDICTED: nucleolysin TIAR isoform 2 [Equus caballus]
gi|311271909|ref|XP_001928970.2| PREDICTED: nucleolysin TIAR isoform 1 [Sus scrofa]
gi|332835148|ref|XP_001154534.2| PREDICTED: nucleolysin TIAR isoform 2 [Pan troglodytes]
gi|345792875|ref|XP_865423.2| PREDICTED: nucleolysin TIAR isoform 18 [Canis lupus familiaris]
gi|390473245|ref|XP_002756491.2| PREDICTED: nucleolysin TIAR isoform 1 [Callithrix jacchus]
gi|395827975|ref|XP_003787163.1| PREDICTED: nucleolysin TIAR isoform 2 [Otolemur garnettii]
gi|397510637|ref|XP_003825699.1| PREDICTED: nucleolysin TIAR isoform 1 [Pan paniscus]
gi|402881650|ref|XP_003904379.1| PREDICTED: nucleolysin TIAR isoform 1 [Papio anubis]
gi|403259379|ref|XP_003922194.1| PREDICTED: nucleolysin TIAR [Saimiri boliviensis boliviensis]
gi|426253184|ref|XP_004020280.1| PREDICTED: nucleolysin TIAR isoform 1 [Ovis aries]
gi|426366372|ref|XP_004050232.1| PREDICTED: nucleolysin TIAR isoform 1 [Gorilla gorilla gorilla]
gi|267131|sp|Q01085.1|TIAR_HUMAN RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|189310|gb|AAA36384.1| nucleolysin TIAR [Homo sapiens]
gi|158254826|dbj|BAF83384.1| unnamed protein product [Homo sapiens]
gi|261858270|dbj|BAI45657.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[synthetic construct]
gi|380783711|gb|AFE63731.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|383408329|gb|AFH27378.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|384942770|gb|AFI34990.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|410218474|gb|JAA06456.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257382|gb|JAA16658.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296996|gb|JAA27098.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 375
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 156/315 (49%), Gaps = 20/315 (6%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ GQP RTL++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYE 57
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQE 192
A L NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++
Sbjct: 58 HRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKS 115
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT
Sbjct: 116 AF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 174
Query: 253 NKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 305
K S Q + Q + P N TV+ G + S +TD+ +R+ FS +GQ++ +
Sbjct: 175 RKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEI 234
Query: 306 KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPNQWN 362
++ K FV+F+ A A+ +NGT + G ++ WG+ SP + Q D +QW
Sbjct: 235 RVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWG 294
Query: 363 --AGYYGYAQGYENY 375
+ YG Q Y Y
Sbjct: 295 QWSQVYGNPQQYGQY 309
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 84 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 143
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 144 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 201
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 202 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 254
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 255 HAIVSVNGT 263
>gi|327296686|ref|XP_003233037.1| hypothetical protein TERG_06034 [Trichophyton rubrum CBS 118892]
gi|326464343|gb|EGD89796.1| hypothetical protein TERG_06034 [Trichophyton rubrum CBS 118892]
Length = 224
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 95/185 (51%), Gaps = 39/185 (21%)
Query: 207 VIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS------ 260
+ D +TG ++GYGFVRF DE++Q RA++EM GV+C RPMRI AT K A
Sbjct: 1 MTDPITGLSRGYGFVRFSDETDQQRALSEMQGVYCGNRPMRISTATPKNKGPAGPGGPAH 60
Query: 261 -------------------------------YQNS--QVAQSDDDPNNTTVFVGNLDSIV 287
Y + Q DPNNTTVFVG L V
Sbjct: 61 MGVPGGPPGGMYPPSMGGAGGPPGPGGPQMGYYGAAPQPMNQFTDPNNTTVFVGGLSGYV 120
Query: 288 TDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
T++ LR F +G++ +VKIP GK CGFVQF R AE A+ + G +G +RLSWGR
Sbjct: 121 TEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR 180
Query: 348 SPSNK 352
S +N
Sbjct: 181 SQNNS 185
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L ++ E L + F GE+ VK+ K G GF++F+ R AE +
Sbjct: 110 TVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVQRHAAEMAINQ 163
Query: 143 FNGTPMPNGEQNFRLNWA 160
G P+ G RL+W
Sbjct: 164 MQGYPI--GNSRVRLSWG 179
>gi|380748929|ref|NP_001244132.1| nucleolysin TIAR isoform 2 [Gallus gallus]
gi|28883273|gb|AAO49720.1| TIA-1 [Gallus gallus]
Length = 372
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 162/333 (48%), Gaps = 19/333 (5%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAASALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV-SAS 260
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K ++
Sbjct: 122 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKST 181
Query: 261 YQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
Y+++ S DD P+N TV+ G + S +T++ +R+ FS +GQ++ +++ K
Sbjct: 182 YESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYS 241
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYEN 374
FV+F A A+ +NGT + G ++ WG+ + + NQ GY Q Y
Sbjct: 242 FVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETPDMISPVQQNQ-----IGYPQAYGQ 296
Query: 375 YGYAAAAPQDPSMYYGGY--PGYGNYQQPQQPQ 405
+G Q G+ P YG Y Q Q
Sbjct: 297 WGQWYGNAQLGQYVPNGWQVPAYGMYGQAWNQQ 329
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 21/184 (11%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFYEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
A+ MNG + +++ AT + Q D N+ VFVG+L +
Sbjct: 58 HAASALAAMNGRKIMGKEVKVNWATTPSS-----------QKKDTSNHFHVFVGDLSPEI 106
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ I
Sbjct: 107 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 166
Query: 342 RLSW 345
R +W
Sbjct: 167 RTNW 170
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 27/188 (14%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIE 129
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 83 TPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVS 142
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWA---------SFGAGEKR---DDTPDH--- 174
F ++ AE +Q G + G + R NWA ++ + K+ DD +
Sbjct: 143 FFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDDVVNQSSP 200
Query: 175 ---TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 201 SNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAH 253
Query: 232 AMTEMNGV 239
A+ +NG
Sbjct: 254 AIVSVNGT 261
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 SALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|321474916|gb|EFX85880.1| hypothetical protein DAPPUDRAFT_20224 [Daphnia pulex]
Length = 346
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 151/329 (45%), Gaps = 19/329 (5%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F G V K+I + G E Y F+EF A L N
Sbjct: 1 YVGNLDPSVTEELIMVLFGQIGTVKGCKIIH--EPGH-EPYCFVEFAEHHSAAAALAAMN 57
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKG 203
E ++NWA+ + DT H IFVGDL+ ++ + L++ F A +
Sbjct: 58 KRNCMGRE--MKVNWATSPGNAPKQDTSKHFHIFVGDLSPEIETHTLRDAFAA-FGEISD 114
Query: 204 AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----KTVSA 259
+VV D T ++KGYGFV F +S+ A+ MNG + TR +R AT K K +
Sbjct: 115 CRVVRDPQTLKSKGYGFVSFVKKSDAENAIAGMNGQWLGTRAIRTNWATRKPPAPKDAGS 174
Query: 260 SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFA 319
+ + N TV+ GNL T+E L+++F YGQ+ +++ K F++FA
Sbjct: 175 KPMSYEEVFGQSSSTNCTVYCGNLAQGSTEEALQKIFGPYGQIQEIRVFKDKGYAFIRFA 234
Query: 320 DRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGY--------YGYAQG 371
+ A +A+ ++ T L GQN++ SWG+ P + + G YGY QG
Sbjct: 235 SKESATQAIVSVHNTDLNGQNVKCSWGKEPGEPGSANNAQLMTGGLGPTNTQYPYGYNQG 294
Query: 372 YENYGYAAAAPQDPSMYYGGYPGYGNYQQ 400
+ PQ S + G GY Y Q
Sbjct: 295 MSYWYPGGYPPQMQSQFVQGMQGYAAYGQ 323
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 33/200 (16%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL ++ L FA GE+ +V+R+ QT + +GYGF+ F+ ++ AE +
Sbjct: 88 IFVGDLSPEIETHTLRDAFAAFGEISDCRVVRDPQTLKSKGYGFVSFVKKSDAENAIAGM 147
Query: 144 NGTPMPNGEQNFRLNWASF------GAGEK---------RDDTPDHTIFVGDLAADVTDY 188
NG + G + R NWA+ AG K + + + T++ G+LA T+
Sbjct: 148 NGQWL--GTRAIRTNWATRKPPAPKDAGSKPMSYEEVFGQSSSTNCTVYCGNLAQGSTEE 205
Query: 189 MLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM-----TEMNG--VFC 241
LQ+ F Y + +V D KGY F+RF + +A+ T++NG V C
Sbjct: 206 ALQKIF-GPYGQIQEIRVFKD------KGYAFIRFASKESATQAIVSVHNTDLNGQNVKC 258
Query: 242 S--TRPMRIGPATNKKTVSA 259
S P G A N + ++
Sbjct: 259 SWGKEPGEPGSANNAQLMTG 278
>gi|125549809|gb|EAY95631.1| hypothetical protein OsI_17488 [Oryza sativa Indica Group]
Length = 263
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/139 (52%), Positives = 89/139 (64%), Gaps = 28/139 (20%)
Query: 277 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQL 336
T+FVG LD VT++ L+++F+ YG++VHVKIP GKRCGFVQ+ +R AE+AL +L GT +
Sbjct: 123 TIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLI 182
Query: 337 GGQNIRLSWGRSPSNKQAQPDPNQWNA----------------GYYGYAQGYENYGYAAA 380
GGQN+RLSWGRS SNKQ Q D NQW A Y GYAQ
Sbjct: 183 GGQNVRLSWGRSLSNKQPQHDSNQWGAGAGAGGYYSGYGQGYEAYGGYAQ---------- 232
Query: 381 APQDPSMY-YGGYPGYGNY 398
PQDP+MY YG Y GY NY
Sbjct: 233 -PQDPNMYGYGAYAGYPNY 250
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L FA GEVV VK+ K+ GF+++++R AE+ L
Sbjct: 123 TIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRC------GFVQYVNRPSAEQALAV 176
Query: 143 FNGTPMPNGEQNFRLNW 159
GT + G QN RL+W
Sbjct: 177 LQGTLI--GGQNVRLSW 191
>gi|357514131|ref|XP_003627354.1| RNA-binding protein [Medicago truncatula]
gi|355521376|gb|AET01830.1| RNA-binding protein [Medicago truncatula]
Length = 389
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 151/296 (51%), Gaps = 31/296 (10%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L FA TG V K+ R +++ YGFI + R A
Sbjct: 20 PSTCRSVYVGNVHTQVTEPLLQEVFAGTGPVEGCKLFRKEKSS----YGFIHYFDRRSAA 75
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ T NG + Q ++NWA + +G++ D + + IFVGDL+ +VTD L F
Sbjct: 76 LAILTLNGRHLFG--QPIKVNWA-YASGQREDTSGHYNIFVGDLSPEVTDATLFACFSV- 131
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT----- 252
Y S A+V+ D+ TGR++G+GFV F + + A+ ++ G + +R +R AT
Sbjct: 132 YQSCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSAINDLTGKWLGSRQIRCNWATKGAGG 191
Query: 253 -------NKKTV----SASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFS 297
+ K+V + S ++ + S+D P N TTV+VGNL S T L F
Sbjct: 192 IEEKQNSDSKSVVELTNGSSEDGKEISSNDVPENNPQYTTVYVGNLGSEATQLDLHRHFH 251
Query: 298 QYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 350
G V V++ K GFV+++ + A A++M N + L G+ I+ SWG P+
Sbjct: 252 ALGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNAQSYLCGKIIKCSWGSKPT 307
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 23/183 (12%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VT+ +LQE F P +G K+ YGF+ + D
Sbjct: 19 DPSTCRSVYVGNVHTQVTEPLLQEVFAGTGP-VEGCKL----FRKEKSSYGFIHYFDRRS 73
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ +NG +P+++ A Q +D + +FVG+L VT
Sbjct: 74 AALAILTLNGRHLFGQPIKVNWAYAS------------GQREDTSGHYNIFVGDLSPEVT 121
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ ++ GFV F + A+ A+ L G LG + IR
Sbjct: 122 DATLFACFSVYQSCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSAINDLTGKWLGSRQIR 181
Query: 343 LSW 345
+W
Sbjct: 182 CNW 184
>gi|54303906|gb|AAV33303.1| aging-associated gene 7 protein [Homo sapiens]
Length = 374
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 156/315 (49%), Gaps = 20/315 (6%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ GQP RTL++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYE 57
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQE 192
A L NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++
Sbjct: 58 HRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKS 115
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT
Sbjct: 116 AF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 174
Query: 253 NKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 305
K S Q + Q + P N TV+ G + S +TD+ +R+ FS +GQ++ +
Sbjct: 175 RKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEI 234
Query: 306 KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPNQWN 362
++ K FV+F+ A A+ +NGT + G ++ WG+ SP + Q D +QW
Sbjct: 235 RVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWG 294
Query: 363 --AGYYGYAQGYENY 375
+ YG Q Y Y
Sbjct: 295 QWSQVYGNPQQYGQY 309
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 84 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 143
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 144 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 201
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 202 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 254
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 255 HAIVSVNGT 263
>gi|324507975|gb|ADY43373.1| Nucleolysin TIAR [Ascaris suum]
Length = 290
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 131/253 (51%), Gaps = 27/253 (10%)
Query: 152 EQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDR 210
++ ++NWA+ + + DT H +F+GDL+ +V + L++ F A + AKV+ D
Sbjct: 8 DREMKVNWATEPGSQAKVDTSKHFHVFIGDLSPEVDNKALKDAF-APFGEVSDAKVIRDS 66
Query: 211 LTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSD 270
T ++KGYGFV + E RA+ +MNG + R +R AT K T + Q+ D
Sbjct: 67 TTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTDGQQSKPELSYD 126
Query: 271 D-----DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAE 325
D P+NT+V++GN++ V DE LR F ++G++V V+I + FV+F + A
Sbjct: 127 DVFNQTGPDNTSVYIGNVNQSVNDEDLRAAFDKFGRIVEVRIFKTQGFAFVRFDKKDSAC 186
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDP 385
A+ +NGT++GGQ ++ SWGR+P +G+ N AAA
Sbjct: 187 NAIVKMNGTEIGGQTVKCSWGRTP--------------------EGHNNQQNAAANYNQM 226
Query: 386 SMYYGGYPGYGNY 398
YG Y YG Y
Sbjct: 227 QGAYGAYGPYGAY 239
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 25/172 (14%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++IGDL +D L FA GEV KVIR+ T + +GYGF+ + R AER ++
Sbjct: 33 VFIGDLSPEVDNKALKDAFAPFGEVSDAKVIRDSTTLKSKGYGFVSYPKREEAERAIEQM 92
Query: 144 NGTPMPNGEQNFRLNWASF------GAGEK----RDDT-----PDHT-IFVGDLAADVTD 187
NG + G + R NWA+ G K DD PD+T +++G++ V D
Sbjct: 93 NGQWL--GRRTIRTNWATRKPTGTDGQQSKPELSYDDVFNQTGPDNTSVYIGNVNQSVND 150
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV 239
L+ F K ++V R+ +T+G+ FVRF + A+ +MNG
Sbjct: 151 EDLRAAF------DKFGRIVEVRIF-KTQGFAFVRFDKKDSACNAIVKMNGT 195
>gi|344306484|ref|XP_003421917.1| PREDICTED: nucleolysin TIAR-like [Loxodonta africana]
Length = 504
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 151/306 (49%), Gaps = 17/306 (5%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G+L + E + F+ G + K+I + + Y F+EF A L
Sbjct: 138 RLLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 195
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 196 AMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAF-APFGKI 252
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT K S
Sbjct: 253 SDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKST 312
Query: 262 QNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
Q + Q + P N TV+ G + S +TD+ +R+ FS +GQ++ +++ K
Sbjct: 313 QENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYS 372
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPNQWN--AGYYGYA 369
FV+F+ A A+ +NGT + G ++ WG+ SP + Q D +QW + YG
Sbjct: 373 FVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNP 432
Query: 370 QGYENY 375
Q Y Y
Sbjct: 433 QQYGQY 438
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 27/188 (14%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIE 129
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 214 TPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVS 273
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDDT 171
F ++ AE + G + G + R NWA+ F +
Sbjct: 274 FYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSP 331
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
+ T++ G +A+ +TD ++++TF S G + I KGY FVRF
Sbjct: 332 KNCTVYCGGIASGLTDQLMRQTF-----SPFGQIMEIRVFP--EKGYSFVRFSTHESAAH 384
Query: 232 AMTEMNGV 239
A+ +NG
Sbjct: 385 AIVSVNGT 392
>gi|217074564|gb|ACJ85642.1| unknown [Medicago truncatula]
gi|388521359|gb|AFK48741.1| unknown [Medicago truncatula]
Length = 407
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 150/296 (50%), Gaps = 31/296 (10%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L FA TG V K+ R +++ YGFI + R A
Sbjct: 38 PSTCRSVYVGNVHTQVTEPLLQEVFAGTGPVEGCKLFRKEKSS----YGFIHYFDRRSAA 93
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ T NG + Q ++NWA + +G++ D + + IFVGDL+ +VTD L F
Sbjct: 94 LAILTLNGRHLFG--QPIKVNWA-YASGQREDTSGHYNIFVGDLSPEVTDATLFACFSV- 149
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT----- 252
Y S A+V+ D+ TGR++G+GFV F + + A+ ++ G + +R +R AT
Sbjct: 150 YQSCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSAINDLTGKWLGSRQIRCNWATKVAGG 209
Query: 253 -------NKKTV----SASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFS 297
+ K+V + S ++ + +D P N TTV+VGNL S T L F
Sbjct: 210 IEEKQNSDSKSVVELTNGSSEDGKEISGNDVPENNPQYTTVYVGNLGSEATQLDLHRHFH 269
Query: 298 QYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 350
G V V++ K GFV+++ + A A++M N + L G+ I+ SWG P+
Sbjct: 270 ALGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNAQSYLCGKIIKCSWGSKPT 325
>gi|158255914|dbj|BAF83928.1| unnamed protein product [Homo sapiens]
Length = 375
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 156/315 (49%), Gaps = 20/315 (6%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ GQP RTL++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYE 57
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQE 192
A L NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++
Sbjct: 58 HRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKS 115
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT
Sbjct: 116 AF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDGENAIVHMGGQWLGGRQIRTNWAT 174
Query: 253 NKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 305
K S Q + Q + P N TV+ G + S +TD+ +R+ FS +GQ++ +
Sbjct: 175 RKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEI 234
Query: 306 KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPNQWN 362
++ K FV+F+ A A+ +NGT + G ++ WG+ SP + Q D +QW
Sbjct: 235 RVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWG 294
Query: 363 --AGYYGYAQGYENY 375
+ YG Q Y Y
Sbjct: 295 QWSQVYGNPQQYGQY 309
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 84 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 143
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ E + G + G + R NWA+ F +
Sbjct: 144 SFYNKLDGENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 201
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 202 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 254
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 255 HAIVSVNGT 263
>gi|367002926|ref|XP_003686197.1| hypothetical protein TPHA_0F02820 [Tetrapisispora phaffii CBS 4417]
gi|357524497|emb|CCE63763.1| hypothetical protein TPHA_0F02820 [Tetrapisispora phaffii CBS 4417]
Length = 608
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 141/310 (45%), Gaps = 72/310 (23%)
Query: 124 GYGFIEFISRAGAERVL------------QTFNGTPMPNGEQNFRLNWASFGAGEKRD-- 169
GY F+EF S+ L ++ N PNG + FRLNWAS GA +
Sbjct: 120 GYCFVEFESQQDVIAALSLNKAVIPNIFSESINLYTNPNGRRTFRLNWAS-GATLQSLIP 178
Query: 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
TP++++F+GDL+ T+ + F+ +Y S K +V+ D + G ++G+GF+RF DE E+
Sbjct: 179 ATPEYSLFIGDLSPLTTEADILSIFQKKYKSVKTVRVMTDPINGSSRGFGFIRFSDEDER 238
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTV----------- 278
A+ MNGV C +R R+ AT + A+ N + D+D + +V
Sbjct: 239 KDALENMNGVMCHSRYFRLALATPRTNKFATSTNMTQVREDNDGRSNSVTNVHTSPYEQT 298
Query: 279 ---------FVGNLD------------------------------------SIVTDEH-L 292
F+ LD S T+E+ L
Sbjct: 299 TTNINISNKFIDKLDVNNFIPTSNNSLQQSAQNIDHVNLDNSNTTVFIGGLSTSTNEYEL 358
Query: 293 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
+ LF +G ++ VKIP GK CGFV+F + A A++ + G + G IRLSWG+S +N
Sbjct: 359 QVLFEPFGNILSVKIPIGKNCGFVKFKRKIEANAAIKGMQGFIINGNPIRLSWGKSNNNA 418
Query: 353 QAQPDPNQWN 362
+ + N
Sbjct: 419 STKLNHKHIN 428
>gi|358397912|gb|EHK47280.1| hypothetical protein TRIATDRAFT_165657, partial [Trichoderma
atroviride IMI 206040]
Length = 465
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 145/309 (46%), Gaps = 38/309 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V VK+I +K YGF+E+ A+R +
Sbjct: 76 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYN-YGFVEYDDPGAADRAMA 134
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 135 TLNGRRVHQSE--IRVNWAYQSNTTTKEDTSNHFHIFVGDLSNEVNDDILHQAFSA-FGS 191
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS-- 258
A+V+ D TGR++GYGFV F D + +A++ M+G + +R +R A K S
Sbjct: 192 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 251
Query: 259 --------------------------ASYQNSQVAQSDDDPN-NTTVFVGNLDSIVTDEH 291
ASY+ +AQ+ PN TT +VGNL T
Sbjct: 252 QQQAMQAMGMTPTTPFGHHQFPAHGIASYE-MILAQT---PNWQTTCYVGNLTPYTTHTD 307
Query: 292 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 351
+ LF +G +V + A + F++ A A+ +NG + G+ ++ SWG+ +
Sbjct: 308 VVPLFQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWGKDKTP 367
Query: 352 KQAQPDPNQ 360
DP Q
Sbjct: 368 NSQSFDPQQ 376
>gi|357156104|ref|XP_003577343.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 451
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 36/330 (10%)
Query: 45 PPQPQAQP-PAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFA 103
P PQ P P + A P +G +PP R++++G++ + ++ L+ F
Sbjct: 42 PMFPQHHPHPGLLAAPQIEPIVSG-NLPPGFDSS--TCRSVYVGNIHLQVTDSLLHEVFQ 98
Query: 104 HTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG 163
G V K+IR +++ +GF+++ R A + + NG + Q ++NWA
Sbjct: 99 SIGPVEGCKLIRKEKSS----FGFVDYYDRRSAALAIVSLNGRQLFG--QPIKVNWAY-- 150
Query: 164 AGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVR 222
A +R+DT H IFVGDL +VTD L F A Y + A+V+ D+ TGR++G+GFV
Sbjct: 151 ASTQREDTSGHFNIFVGDLCPEVTDAALFAFFSA-YSTCSDARVMWDQKTGRSRGFGFVS 209
Query: 223 FGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVA--------------- 267
F ++ + A+ E+NG + R +R AT QN+
Sbjct: 210 FRNQQDAQTAINELNGKWLGNRQIRCNWATKGANAGEEKQNTDSKGMVELINGSSEAGKE 269
Query: 268 -QSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQY--GQLVHVKIPAGKRCGFVQFAD 320
++D P N TTV+VGNL + + F G + V++ K GFV+++
Sbjct: 270 NANEDGPENNPQYTTVYVGNLPHDINSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYST 329
Query: 321 RSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
A A++ NG +GG+ I+ SWG P+
Sbjct: 330 HEEAALAIQTGNGQLVGGRQIKCSWGSKPT 359
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 23/189 (12%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VTD +L E F++ P +G K++ +GFV + D
Sbjct: 72 DSSTCRSVYVGNIHLQVTDSLLHEVFQSIGP-VEGCKLI----RKEKSSFGFVDYYDRRS 126
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ +NG +P++ V+ +Y ++Q +D + +FVG+L VT
Sbjct: 127 AALAIVSLNGRQLFGQPIK---------VNWAYASTQ---REDTSGHFNIFVGDLCPEVT 174
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ ++ G FV F ++ A+ A+ LNG LG + IR
Sbjct: 175 DAALFAFFSAYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINELNGKWLGNRQIR 234
Query: 343 LSWGRSPSN 351
+W +N
Sbjct: 235 CNWATKGAN 243
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--GFVQFADRSCAEEAL 328
D +V+VGN+ VTD L E+F G + K+ ++ GFV + DR A A+
Sbjct: 72 DSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSFGFVDYYDRRSAALAI 131
Query: 329 RMLNGTQLGGQNIRLSWGRSPSNKQ 353
LNG QL GQ I+++W + + ++
Sbjct: 132 VSLNGRQLFGQPIKVNWAYASTQRE 156
>gi|148666756|gb|EDK99172.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_f
[Mus musculus]
Length = 375
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 152/306 (49%), Gaps = 23/306 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K S
Sbjct: 122 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKST 181
Query: 262 QNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
S Q S PNN TV+ G + S +T++ +R+ FS +GQ++ +++ K
Sbjct: 182 YESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYS 241
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ----PDPNQWNAG 364
FV+F+ A A+ +NGT + G ++ WG+ +P +Q Q P QW
Sbjct: 242 FVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPPTYGQWGQ- 300
Query: 365 YYGYAQ 370
+YG AQ
Sbjct: 301 WYGNAQ 306
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 21/184 (11%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
A+ MNG + +++ AT +Q D N+ VFVG+L +
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWATTPS-----------SQKKDTSNHFHVFVGDLSPEI 106
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ I
Sbjct: 107 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 166
Query: 342 RLSW 345
R +W
Sbjct: 167 RTNW 170
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 82 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 141
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 142 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSS 199
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 200 PNNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFSSHESAA 252
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 253 HAIVSVNGT 261
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|91086169|ref|XP_970456.1| PREDICTED: similar to TIA-1 homolog [Tribolium castaneum]
gi|270010230|gb|EFA06678.1| hypothetical protein TcasGA2_TC009608 [Tribolium castaneum]
Length = 364
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 142/284 (50%), Gaps = 15/284 (5%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L T F+ G V K+IR + Y F+EF + A L
Sbjct: 8 KTLYVGNLDPSVSEDLLCTLFSQIGPVKGCKIIREPGN---DPYAFVEFTNHQSASTALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N + E ++NWA+ G K+D + H IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRLFLDKE--MKVNWATSPGNQPKQDTSNHHHIFVGDLSPEIETETLREAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----KT 256
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K KT
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTRKPPPPKT 181
Query: 257 VSASYQNSQ----VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 312
A+ + Q + P N TV+ G + +T++ +++ FSQ+G + +++ K
Sbjct: 182 EKAAQRAKQPTFDEVYNQSSPTNCTVYCGGFTTGLTEDLMQKTFSQFGVIQDIRVFKDKG 241
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP 356
F++FA + A A+ ++ T++ GQ ++ WG+ A P
Sbjct: 242 YAFIKFATKESATHAIETIHNTEINGQMVKCFWGKENGGMGADP 285
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 327
D+ + T++VGNLD V+++ L LFSQ G + KI P FV+F + A A
Sbjct: 3 DESHPKTLYVGNLDPSVSEDLLCTLFSQIGPVKGCKIIREPGNDPYAFVEFTNHQSASTA 62
Query: 328 LRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ 360
L +N + ++++W SP N+ Q N
Sbjct: 63 LAAMNKRLFLDKEMKVNWATSPGNQPKQDTSNH 95
>gi|225444659|ref|XP_002277008.1| PREDICTED: nucleolysin TIAR isoform 2 [Vitis vinifera]
Length = 426
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 154/297 (51%), Gaps = 36/297 (12%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + E L F+ TG + K+IR +++ YGF+++ R A +
Sbjct: 53 CRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKSS----YGFVDYFDRRSAALSI 108
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
T NG + Q ++NWA A +R+DT H IFVGDL+ +VTD L F YP
Sbjct: 109 VTLNGRHLFG--QPIKVNWAY--ASSQREDTSGHYNIFVGDLSPEVTDATLFACFSV-YP 163
Query: 200 ST----KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG------ 249
S + A+V+ D+ TGR++G+GFV F ++ E A+ ++NG + +R +R
Sbjct: 164 SCSSGIRDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGRWLGSRQIRCNWATKGA 223
Query: 250 ------PATNKKTV----SASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLREL 295
P ++ K+V + + ++ + +D+ P N TTV+VGNL VT L
Sbjct: 224 GGNEDKPNSDAKSVVELTNGTSEDGKDKSNDEAPENNLQYTTVYVGNLAPEVTSVDLHRH 283
Query: 296 FSQY--GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
F G + V++ K GFV+++ + A A++M N L G+ I+ SWG P+
Sbjct: 284 FHALGAGAIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARILCGKPIKCSWGSKPT 340
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--GFVQFADRSCAEEAL 328
D +V+VGN+ VT+ L+E+FS G L K+ ++ GFV + DR A ++
Sbjct: 49 DSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKSSYGFVDYFDRRSAALSI 108
Query: 329 RMLNGTQLGGQNIRLSWGRSPSNKQ 353
LNG L GQ I+++W + S ++
Sbjct: 109 VTLNGRHLFGQPIKVNWAYASSQRE 133
>gi|443924183|gb|ELU43247.1| polyadenylate-binding protein [Rhizoctonia solani AG-1 IA]
Length = 498
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 146/305 (47%), Gaps = 45/305 (14%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 48 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGG-QNYGFVEYMDMRAAETALQ 106
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D + + +FVGDL+ +V D +L + F A + S
Sbjct: 107 TLNGRKIFDTE--IRVNWAYQGTQNKEDTSNHYHVFVGDLSPEVNDEVLAKAFAA-FGSL 163
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA-- 259
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A K
Sbjct: 164 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQSGGGG 223
Query: 260 ----------------------------------SYQNSQVAQSDDDPNNTTVFVGNLDS 285
SY+ S V+Q+ NTTV+VGNL
Sbjct: 224 GMPPGMPSMGDSMGMGGGAMGGVPAPMNFQGGPLSYE-SVVSQT--PAYNTTVYVGNLVP 280
Query: 286 IVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 345
T L LF G L +++ A + FV+ A A+ L G + G+ I+ SW
Sbjct: 281 YCTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHENAAMAIVQLQGQLVHGRPIKCSW 340
Query: 346 GRSPS 350
G+ S
Sbjct: 341 GKDRS 345
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
+LR++ ++ + R PA++ +S S S + P ++VGNL VT
Sbjct: 4 RLRSLGQVGSLPDIAVDSRPAPASDHGCLSVS-----TCSSAEAPRRAHLYVGNLSPRVT 58
Query: 289 DEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
+ L E+F+ G + HVKI G+ GFV++ D AE AL+ LNG ++ I
Sbjct: 59 EYMLTEIFAVAGPVQHVKIIPDRNYQHGGQNYGFVEYMDMRAAETALQTLNGRKIFDTEI 118
Query: 342 RLSW 345
R++W
Sbjct: 119 RVNW 122
>gi|395335144|gb|EJF67520.1| hypothetical protein DICSQDRAFT_164378 [Dichomitus squalens
LYAD-421 SS1]
Length = 395
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 159/334 (47%), Gaps = 55/334 (16%)
Query: 98 LNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNF 155
L FA G V VK+I RN Q G + YGF+E++ AE LQT NG + + E
Sbjct: 2 LTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRAAETALQTLNGRKIFDTE--I 58
Query: 156 RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRT 215
R+NWA G K D + + +FVGDL+ +V D +L + F A + + A+V+ D +G++
Sbjct: 59 RVNWAYQGQQNKEDTSNHYHVFVGDLSPEVNDDVLAKAFSA-FGTLSDARVMWDMNSGKS 117
Query: 216 KGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA---------------- 259
+GYGF+ F D+++ +A+ MNG + +R +R+ A N+KT A
Sbjct: 118 RGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA-NQKTQGAPPAGPPRTGMGGGAPA 176
Query: 260 ---------SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG 310
SY+ S V Q+ NTTV+VGNL T L LF G L +++ A
Sbjct: 177 PMNFQGGPLSYE-SVVQQT--PAYNTTVYVGNLVPYATQADLIPLFQSIGYLSEIRMQAD 233
Query: 311 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQPDPNQ---W 361
+ FV+ A A+ L G + G+ I+ SWG+ + S+ P P
Sbjct: 234 RGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRDSGAALSSGSLSPTPTAAPYA 293
Query: 362 NAGYYGYAQ--GYENYGYAAAAPQDPSMYYGGYP 393
N YG Q Y YG+ A YGG+P
Sbjct: 294 NVPMYGMPQPNTYGQYGFGA---------YGGFP 318
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL +++ L F+ G + +V+ + +G+ GYGF+ F + AE+ + T
Sbjct: 79 VFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 138
Query: 144 NGTPMPNGEQNFRLNWAS 161
NG + G + R+NWA+
Sbjct: 139 NGEWL--GSRAIRVNWAN 154
>gi|449550716|gb|EMD41680.1| hypothetical protein CERSUDRAFT_110250 [Ceriporiopsis subvermispora
B]
Length = 448
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 147/297 (49%), Gaps = 41/297 (13%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 16 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRAAETALQ 74
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D + +FVGDL+ +V D +L + F A + +
Sbjct: 75 TLNGRKIFDTE--IRVNWAYQGQQNKEDTSNHFHVFVGDLSPEVNDEVLAKAFSA-FGTL 131
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA-- 259
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A N+KT A
Sbjct: 132 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA-NQKTQGAPP 190
Query: 260 -----------------------------SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDE 290
SY+ S V Q+ NTTV+VGNL T
Sbjct: 191 VGVRSGSMSAGSGGGGGAPAPMNFSGGPLSYE-SVVQQT--PAYNTTVYVGNLVPYCTQA 247
Query: 291 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
L LF G L +++ A + FV+ A A+ L G + G+ I+ SWG+
Sbjct: 248 DLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGK 304
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 95/190 (50%), Gaps = 23/190 (12%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDR-LTGRTKGYGFVRFGDESEQLRAMT 234
++VG+L+ VT+YML E F P + K++ DR YGFV + D A+
Sbjct: 16 LYVGNLSPRVTEYMLTEIFAVAGP-VQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 74
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
+NG +R V+ +YQ Q +D N+ VFVG+L V DE L +
Sbjct: 75 TLNGRKIFDTEIR---------VNWAYQGQQ--NKEDTSNHFHVFVGDLSPEVNDEVLAK 123
Query: 295 LFSQYGQLVHVKI----PAGKR--CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
FS +G L ++ +GK GF+ F D++ AE+A+ +NG LG + IR++W
Sbjct: 124 AFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNW--- 180
Query: 349 PSNKQAQPDP 358
+N++ Q P
Sbjct: 181 -ANQKTQGAP 189
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADRSC 323
+ P ++VGNL VT+ L E+F+ G + HVKI G GFV++ D
Sbjct: 9 EAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRA 68
Query: 324 AEEALRMLNGTQLGGQNIRLSW 345
AE AL+ LNG ++ IR++W
Sbjct: 69 AETALQTLNGRKIFDTEIRVNW 90
>gi|432875366|ref|XP_004072806.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 140/273 (51%), Gaps = 12/273 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E + F G + K+I + T + Y F+EF A L
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVD--TAGNDPYCFVEFYDHRHAAASLA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAF-APFGRI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----KTV 257
A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT K KT
Sbjct: 122 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKTT 181
Query: 258 ---SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
++ + + + S P+N TV+ G + S +T++ +R+ FS +GQ++ V++ K
Sbjct: 182 YESNSKHLSFEEVMSQSSPSNCTVYCGGVSSGLTEQLMRQTFSAFGQIMEVRVFPDKGYS 241
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
FV+F A A+ +NGT + G ++ WG+
Sbjct: 242 FVRFNSHESAAHAIVSVNGTSIDGHVVKCYWGK 274
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 90/184 (48%), Gaps = 21/184 (11%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
DD P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F D
Sbjct: 2 EDDQP-RTLYVGNLSRDVTEPLILQVFTQIGP-CKSCKMIVD--TAGNDPYCFVEFYDHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
++ MNG + +++ AT + +Q D N+ VFVG+L +
Sbjct: 58 HAAASLAAMNGRKIMGKEVKVNWAT-----------TPTSQKKDTSNHFHVFVGDLSPEI 106
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ I
Sbjct: 107 TTEDVKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQI 166
Query: 342 RLSW 345
R +W
Sbjct: 167 RTNW 170
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 27/188 (14%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIE 129
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 83 TPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFAPFGRISDARVVKDMATGKSKGYGFVS 142
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDDT 171
F ++ AE +Q G + G + R NWA SF +
Sbjct: 143 FFNKWDAENAIQHMGGQWL--GGRQIRTNWATRKPPAPKTTYESNSKHLSFEEVMSQSSP 200
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
+ T++ G +++ +T+ ++++TF A + +V D KGY FVRF
Sbjct: 201 SNCTVYCGGVSSGLTEQLMRQTFSA-FGQIMEVRVFPD------KGYSFVRFNSHESAAH 253
Query: 232 AMTEMNGV 239
A+ +NG
Sbjct: 254 AIVSVNGT 261
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 270 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCA 324
DD P T++VGNL VT+ + ++F+Q G K+ AG C FV+F D A
Sbjct: 3 DDQPR--TLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYC-FVEFYDHRHA 59
Query: 325 EEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
+L +NG ++ G+ ++++W +P++++
Sbjct: 60 AASLAAMNGRKIMGKEVKVNWATTPTSQK 88
>gi|427778057|gb|JAA54480.1| Putative trna selenocysteine 1-associated protein 1 [Rhipicephalus
pulchellus]
Length = 257
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 115/207 (55%), Gaps = 28/207 (13%)
Query: 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
G TLW+GDL+ MDE ++ F+ GE V VK+IR++ TG GYGF++F AE
Sbjct: 3 GSASTLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAE 62
Query: 138 RVLQTFNGTPMPNGEQ--NFRLNWA--------------------SFGAGEK---RDDTP 172
R L NG P+PN Q FRLN A + G G + +
Sbjct: 63 RALLRCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSN 122
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ ++FVGDL+ADV D +L + F RYPS + AKVV+D TG +KG+GFVRF D +E A
Sbjct: 123 ELSMFVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLDP-TGLSKGFGFVRFSDGTEYQEA 181
Query: 233 MTEM-NGVFCSTRPMRIGPATNKKTVS 258
+ +M + + ++P+R+G A ++ +
Sbjct: 182 LVDMQHSLLVGSKPIRVGVANPRRAAA 208
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GDL + +Y +Q+ F + K++ DRLTG +GYGF+ FGDE RA+
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAERALL 66
Query: 235 EMNGV----FCSTRPMRIGPATNKKTVSASYQNSQVA------------QSDDDPNNTTV 278
NG + R+ A N Q N ++
Sbjct: 67 RCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSNELSM 126
Query: 279 FVGNLDSIVTDEHLRELFSQ-YGQLVHVKI---PAG--KRCGFVQFADRSCAEEAL-RML 331
FVG+L + V D L + FSQ Y + K+ P G K GFV+F+D + +EAL M
Sbjct: 127 FVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLDPTGLSKGFGFVRFSDGTEYQEALVDMQ 186
Query: 332 NGTQLGGQNIRL 343
+ +G + IR+
Sbjct: 187 HSLLVGSKPIRV 198
>gi|118918389|ref|NP_001036895.2| TIA1 cytotoxic granule-associated RNA binding protein [Bombyx mori]
gi|111608113|gb|ABH10800.1| nucleolysin TIAR protein [Bombyx mori]
Length = 402
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 143/279 (51%), Gaps = 19/279 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E +L T F G+V K+IR + Y F+EF A L
Sbjct: 8 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN---DPYAFLEFTCHTAAATALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETFRARYPS 200
N + + E ++NWA+ + + DT +H IFVGDL+ ++ +L+E F A +
Sbjct: 65 AMNKRVVLDKE--MKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK---KTV 257
++V D T ++KGY FV F +++ A+ MNG + +R +R +T K K V
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGV 181
Query: 258 SASYQNSQVAQ--------SDDDPNNTTVFVGNLDS-IVTDEHLRELFSQYGQLVHVKIP 308
+ +S+ A+ + P NTTV+ G S I+T+E ++ FSQ+GQ+ +++
Sbjct: 182 NEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF 241
Query: 309 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
K F++F + A A+ + T++ G ++ WG+
Sbjct: 242 RDKGYAFIRFTTKEAAAHAIEATHNTEISGHTVKCFWGK 280
>gi|56755515|gb|AAW25936.1| SJCHGC05387 protein [Schistosoma japonicum]
Length = 348
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 119/207 (57%), Gaps = 23/207 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
T+W+GDL+ +MDE ++ F +GE +V+VKVIRNK TGQ GYGFIEF + A +
Sbjct: 6 HTIWMGDLEPYMDEMFIKRAFETSGENIVSVKVIRNKATGQTLGYGFIEFANSTSARDAM 65
Query: 141 QTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTPDH--TIFVGDLAADVTDYMLQETFRAR 197
NG +P + F+LN AS+G +D T + ++FVG+L DV D L F+ +
Sbjct: 66 LKLNGKLIPGAPTRRFKLNHASYG----KDSTSSNECSLFVGELTEDVDDLALFNAFK-K 120
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST--RPMRIGPATNKK 255
YP+ + AKVV+ G+++GYGFVRF ES+ +A+ EM +C +P+R+ A K+
Sbjct: 121 YPTCRSAKVVM--TNGKSRGYGFVRFLTESDMDKALIEMQN-YCGLGYKPIRVSLAIPKR 177
Query: 256 ---------TVSASYQNSQVAQSDDDP 273
T SAS +S V DP
Sbjct: 178 YNADGSLVVTTSASETSSVVPSGMPDP 204
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 15/177 (8%)
Query: 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
HTI++GDL + + ++ F + KV+ ++ TG+T GYGF+ F + + AM
Sbjct: 6 HTIWMGDLEPYMDEMFIKRAFETSGENIVSVKVIRNKATGQTLGYGFIEFANSTSARDAM 65
Query: 234 TEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG P R K ASY + N ++FVG L V D L
Sbjct: 66 LKLNGKLIPGAPTR-----RFKLNHASYGKDSTSS-----NECSLFVGELTEDVDDLALF 115
Query: 294 ELFSQY--GQLVHVKIPAGKR--CGFVQFADRSCAEEAL-RMLNGTQLGGQNIRLSW 345
F +Y + V + GK GFV+F S ++AL M N LG + IR+S
Sbjct: 116 NAFKKYPTCRSAKVVMTNGKSRGYGFVRFLTESDMDKALIEMQNYCGLGYKPIRVSL 172
>gi|307178104|gb|EFN66931.1| Nucleolysin TIAR [Camponotus floridanus]
Length = 393
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 143/310 (46%), Gaps = 29/310 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E L F+ G V K+IR + Y F+EF + A L
Sbjct: 8 RTLYVGNLDASVSEDLLCALFSQIGAVKGCKIIREPGN---DPYAFVEFTNHQSAATALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N + E ++NWA+ G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRSFLDKE--MKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA- 259
++V D T ++KGY FV F +SE A+ MNG + +R +R +T K
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRS 181
Query: 260 --------SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 311
S N + + P N TV+ G + +TDE +++ FS +G + +++ K
Sbjct: 182 ERPRHSNNSKPNYEEVYNQSSPTNCTVYCGGFTNGITDELIKKTFSPFGTIQDIRVFKDK 241
Query: 312 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS---------PSNKQAQPDPNQWN 362
F++F + A A+ + T++ G ++ WG+ +N QAQ Q
Sbjct: 242 GYAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQAQ----QVT 297
Query: 363 AGYYGYAQGY 372
AG YA GY
Sbjct: 298 AGVGQYAYGY 307
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 270 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEE 326
++ N T++VGNLD+ V+++ L LFSQ G + KI P FV+F + A
Sbjct: 2 SEESNPRTLYVGNLDASVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQSAAT 61
Query: 327 ALRMLNGTQLGGQNIRLSWGRSPSNK 352
AL +N + ++++W SP N+
Sbjct: 62 ALAAMNKRSFLDKEMKVNWATSPGNQ 87
>gi|297829972|ref|XP_002882868.1| hypothetical protein ARALYDRAFT_478823 [Arabidopsis lyrata subsp.
lyrata]
gi|297328708|gb|EFH59127.1| hypothetical protein ARALYDRAFT_478823 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 155/318 (48%), Gaps = 43/318 (13%)
Query: 67 GVAVPPQQQ----------GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRN 116
GV PPQ + P R++++G++ + E L F TG V + K+IR
Sbjct: 36 GVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRK 95
Query: 117 KQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTI 176
++ YGF+ + R A + + NG + Q ++NWA + G++ D + I
Sbjct: 96 DKSS----YGFVHYFDRRSAALAILSLNGRHLFG--QPIKVNWA-YATGQREDTSSHFNI 148
Query: 177 FVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM 236
FVGDL+ +VTD L ++F + S A+V+ D+ TGR++G+GFV F ++ + A+ EM
Sbjct: 149 FVGDLSPEVTDATLYQSFSV-FSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 207
Query: 237 NGVFCSTRPMRIGPATNKKT----------------VSASYQNSQVAQSDDDPNN----T 276
NG + S+R +R AT T + S ++ + +++ P N T
Sbjct: 208 NGKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGKETLNEEAPENNSQFT 267
Query: 277 TVFVGNLDSIVTDEHLRELFSQYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGT 334
TV+VGNL VT L F G V V++ K GFV++ A A++M N T
Sbjct: 268 TVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFVRYNTHPEAALAIQMGN-T 326
Query: 335 Q--LGGQNIRLSWGRSPS 350
Q L + I+ SWG P+
Sbjct: 327 QPYLFNRQIKCSWGNKPT 344
>gi|449446638|ref|XP_004141078.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 420
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 153/306 (50%), Gaps = 36/306 (11%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + E L F+ G + K+IR +++ YGF+++ R A +
Sbjct: 45 CRSVYVGNIHPQVTEPLLQEVFSSIGPIEGCKLIRKEKSS----YGFVDYFDRRSAAVSI 100
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
+ NG + Q ++NWA A +R+DT H IFVGDL+ +VTD L F YP
Sbjct: 101 ISLNGRNLFG--QPIKVNWAY--ASSQREDTSGHFNIFVGDLSPEVTDATLFACFSV-YP 155
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT------- 252
S A+V+ D+ TGR++GYGFV F +E + A+ ++NG + +R +R AT
Sbjct: 156 SCSDARVMWDQKTGRSRGYGFVAFRNEQDAQSAINDINGKWLGSRQIRCNWATKGANSGD 215
Query: 253 -----NKKTV----SASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQY 299
+ ++V S + Q ++D P N TTV+VGNL VT L F
Sbjct: 216 DKQSSDSRSVVELTSGTSDGGQEKSNEDAPENNPQYTTVYVGNLAPEVTSVDLHRYFHAL 275
Query: 300 --GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP----SNKQ 353
G + V++ K GFV+++ + A A++ N + G+ I+ SWG P +N
Sbjct: 276 GAGTIEDVRVQRDKGFGFVRYSTNAEAALAIQTGNARVVCGKPIKCSWGSKPTPPGTNST 335
Query: 354 AQPDPN 359
P PN
Sbjct: 336 PLPPPN 341
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 23/189 (12%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VT+ +LQE F + P +G K++ YGFV + D
Sbjct: 41 DSSTCRSVYVGNIHPQVTEPLLQEVFSSIGP-IEGCKLI----RKEKSSYGFVDYFDRRS 95
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
++ +NG +P+++ A Y +S Q +D + +FVG+L VT
Sbjct: 96 AAVSIISLNGRNLFGQPIKVNWA---------YASS---QREDTSGHFNIFVGDLSPEVT 143
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ ++ GFV F + A+ A+ +NG LG + IR
Sbjct: 144 DATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFRNEQDAQSAINDINGKWLGSRQIR 203
Query: 343 LSWGRSPSN 351
+W +N
Sbjct: 204 CNWATKGAN 212
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--GFVQFADRSCAEEAL 328
D +V+VGN+ VT+ L+E+FS G + K+ ++ GFV + DR A ++
Sbjct: 41 DSSTCRSVYVGNIHPQVTEPLLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSI 100
Query: 329 RMLNGTQLGGQNIRLSWGRSPSNKQ 353
LNG L GQ I+++W + S ++
Sbjct: 101 ISLNGRNLFGQPIKVNWAYASSQRE 125
>gi|410900504|ref|XP_003963736.1| PREDICTED: nucleolysin TIAR-like isoform 1 [Takifugu rubripes]
Length = 386
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 153/293 (52%), Gaps = 14/293 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G + K+I + + + Y F+EF+ A
Sbjct: 10 KTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTSS--DPYCFVEFVDHKDAASARA 67
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T N + E ++NWA+ + +K+D + +FVGDL+ D+T ++ F A +
Sbjct: 68 TMNKRKILGKE--VKVNWATSPSCQKKDTSNHFHVFVGDLSPDITTEDIRAAF-APFGHI 124
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+V+ D TG++KGYGFV F ++ + A+++M G + R +R AT K S+
Sbjct: 125 SDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPAPKSF 184
Query: 262 QN--SQVAQSDD-----DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
Q+ S+ + DD P+N TV+ G + S +T+ +++ FS +GQ++ +++ K
Sbjct: 185 QDNGSKHLKFDDIVTQSSPHNCTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFPDKGYS 244
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYG 367
FV+F+ A A+ +NGT + G ++ WG+ + Q ++N Y+G
Sbjct: 245 FVRFSSHDSAAHAIVSVNGTVIEGNLVKCFWGKESPDMQKNSQQVEYN--YWG 295
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 20/183 (10%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
+++ T++VG+L+ DVT+ ++ + F P K K++ D + + Y FV F D +
Sbjct: 5 EESLSKTLYVGNLSRDVTEILILQLFSQIGP-CKSCKMITDHTS--SDPYCFVEFVDHKD 61
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A MN + +G K V ++ S Q D N+ VFVG+L +T
Sbjct: 62 AASARATMN------KRKILG-----KEVKVNWATSPSCQKKDTSNHFHVFVGDLSPDIT 110
Query: 289 DEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
E +R F+ +G + ++ K GFV F ++ AE A+ + G L G+ IR
Sbjct: 111 TEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIR 170
Query: 343 LSW 345
+W
Sbjct: 171 TNW 173
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 270 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG----FVQFADRSCAE 325
D++ + T++VGNL VT+ + +LFSQ G K+ FV+F D A
Sbjct: 4 DEESLSKTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTSSDPYCFVEFVDHKDAA 63
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPS 350
A +N ++ G+ ++++W SPS
Sbjct: 64 SARATMNKRKILGKEVKVNWATSPS 88
>gi|259648117|dbj|BAI40366.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 144/285 (50%), Gaps = 19/285 (6%)
Query: 76 GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAG 135
G +TL++G+L + E +L T F G+V K+IR + Y F+EF
Sbjct: 2 GDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN---DPYAFLEFTCHTA 58
Query: 136 AERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETF 194
A L N + + E ++NWA+ + + DT +H IFVGDL+ ++ +L+E F
Sbjct: 59 AATALAAMNKRVVLDKE--MKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF 116
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
A + ++V D T ++KGY FV F +++ A+ MNG + +R +R +T K
Sbjct: 117 -APFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRK 175
Query: 255 ---KTVSASYQNSQVAQ--------SDDDPNNTTVFVGNLDS-IVTDEHLRELFSQYGQL 302
K V+ +S+ A+ + P NTTV+ G S I+T+E ++ FSQ+GQ+
Sbjct: 176 PPAKGVNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQI 235
Query: 303 VHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
+++ K F++F + A A+ + T++ G ++ WG+
Sbjct: 236 QDIRVFRDKGYAFIRFTTKEAAAHAIEATHNTEISGHTVKCFWGK 280
>gi|238883643|gb|EEQ47281.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 452
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 145/284 (51%), Gaps = 20/284 (7%)
Query: 84 LWIGDLQ-YWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+W+GDL W +E+ N + VK++R++ Y F+ F + + +Q
Sbjct: 85 MWMGDLDPQWTEESIDNLWTKLVSKPHHVKIMRDRLQPSKPSYCFVTFRDQESIDLAIQR 144
Query: 143 FNGTPMPNGEQNFRLNWA---SFGAGEKRDDTP-DHTIFVGDLAADVTDYMLQETFRARY 198
NG +P+ + F+LN++ S G+ ++ ++ +++IF+GDLA +V+D L F +Y
Sbjct: 145 -NGQKVPDSNRVFKLNYSGRNSTGSHDRSTNSSNEYSIFIGDLAPEVSDAALYNKFNMKY 203
Query: 199 PS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA------ 251
P+ K AKV+ D T ++KG+GFV+F RA+ EM G ++ +R+G A
Sbjct: 204 PNQIKQAKVITDSSTRKSKGFGFVKFHSPDIMNRALKEMQGYNIGSKAIRVGLAAGSHVD 263
Query: 252 -TNKKTVSASYQNSQVAQSD------DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 304
+ K + V QS DPNNT+ +G L +T+ L + F +G LV+
Sbjct: 264 TSFKPVTKLDHHRVPVPQSQPALNQFTDPNNTSFTIGGLSGRITESELEQHFIGFGDLVY 323
Query: 305 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
++ + G+++F RS AE A + G + ++++WG S
Sbjct: 324 CRVSKDYQTGYIKFYSRSAAESAFLNMYGFMINDCRLQITWGSS 367
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 74/181 (40%), Gaps = 18/181 (9%)
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
D +++GDL T+ + + K++ DRL Y FV F D+ E +
Sbjct: 82 DFQMWMGDLDPQWTEESIDNLWTKLVSKPHHVKIMRDRLQPSKPSYCFVTFRDQ-ESIDL 140
Query: 233 MTEMNG--VFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDE 290
+ NG V S R ++ + T S +S + N ++F+G+L V+D
Sbjct: 141 AIQRNGQKVPDSNRVFKLNYSGRNSTGSHD-------RSTNSSNEYSIFIGDLAPEVSDA 193
Query: 291 HLRELFSQY--GQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
L F+ Q+ K+ K GFV+F AL+ + G +G + IR
Sbjct: 194 ALYNKFNMKYPNQIKQAKVITDSSTRKSKGFGFVKFHSPDIMNRALKEMQGYNIGSKAIR 253
Query: 343 L 343
+
Sbjct: 254 V 254
>gi|427778771|gb|JAA54837.1| Putative trna selenocysteine 1-associated protein 1 [Rhipicephalus
pulchellus]
Length = 217
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 115/207 (55%), Gaps = 28/207 (13%)
Query: 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
G TLW+GDL+ MDE ++ F+ GE V VK+IR++ TG GYGF++F AE
Sbjct: 3 GSASTLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAE 62
Query: 138 RVLQTFNGTPMPNGEQ--NFRLNWA--------------------SFGAGEK---RDDTP 172
R L NG P+PN Q FRLN A + G G + +
Sbjct: 63 RALLRCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSN 122
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ ++FVGDL+ADV D +L + F RYPS + AKVV+D TG +KG+GFVRF D +E A
Sbjct: 123 ELSMFVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLDP-TGLSKGFGFVRFSDGTEYQEA 181
Query: 233 MTEM-NGVFCSTRPMRIGPATNKKTVS 258
+ +M + + ++P+R+G A ++ +
Sbjct: 182 LVDMQHSLLVGSKPIRVGVANPRRAAA 208
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GDL + +Y +Q+ F + K++ DRLTG +GYGF+ FGDE RA+
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAERALL 66
Query: 235 EMNGV----FCSTRPMRIGPATNKKTVSASYQNSQVA------------QSDDDPNNTTV 278
NG + R+ A N Q N ++
Sbjct: 67 RCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSNELSM 126
Query: 279 FVGNLDSIVTDEHLRELFSQ-YGQLVHVKI---PAG--KRCGFVQFADRSCAEEAL-RML 331
FVG+L + V D L + FSQ Y + K+ P G K GFV+F+D + +EAL M
Sbjct: 127 FVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLDPTGLSKGFGFVRFSDGTEYQEALVDMQ 186
Query: 332 NGTQLGGQNIRL 343
+ +G + IR+
Sbjct: 187 HSLLVGSKPIRV 198
>gi|389742195|gb|EIM83382.1| polyadenylate-binding protein [Stereum hirsutum FP-91666 SS1]
Length = 422
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 148/302 (49%), Gaps = 38/302 (12%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRAAETALQ 76
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D + +FVGDL+ +V D +L + F A + +
Sbjct: 77 TLNGRKIFDTE--IRVNWAYQGQQNKEDTSNHFHVFVGDLSPEVNDDVLAKAFAA-FGTM 133
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI------------- 248
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+
Sbjct: 134 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGGLPV 193
Query: 249 --GPATNKKTVSA--------------SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 292
GP + A SY+ S V Q+ NTTV+VGNL T L
Sbjct: 194 SGGPTASPTRTGAGGAPAPINFQGGPLSYE-SVVQQTP--AFNTTVYVGNLVPYCTQSDL 250
Query: 293 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
LF G L +++ A + FV+ A A+ L G + G+ I+ SWG+ ++
Sbjct: 251 IPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQLVHGRPIKCSWGKDRADG 310
Query: 353 QA 354
A
Sbjct: 311 GA 312
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADRSC 323
+ P ++VGNL VT+ L E+F+ G + HVKI G GFV++ D
Sbjct: 11 EAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRA 70
Query: 324 AEEALRMLNGTQLGGQNIRLSW 345
AE AL+ LNG ++ IR++W
Sbjct: 71 AETALQTLNGRKIFDTEIRVNW 92
>gi|241951870|ref|XP_002418657.1| RNA binding protein, putative [Candida dubliniensis CD36]
gi|223641996|emb|CAX43960.1| RNA binding protein, putative [Candida dubliniensis CD36]
Length = 451
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 146/284 (51%), Gaps = 20/284 (7%)
Query: 84 LWIGDLQ-YWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+W+GDL +W +E+ N + VK++R++ Y F+ F + + +Q
Sbjct: 84 MWMGDLDPHWTEESIDNLWTKLVSKPHHVKIMRDRLQPSKPSYCFVTFRDKESIDLAIQR 143
Query: 143 FNGTPMPNGEQNFRLNWA---SFGAGEKRDD-TPDHTIFVGDLAADVTDYMLQETFRARY 198
NG +P+ + F+LN++ S G+ ++ + + +++IF+GDLA +V+D L F +Y
Sbjct: 144 -NGQKVPDSNRVFKLNYSGRNSTGSNDRSTNLSNEYSIFIGDLAPEVSDATLFNKFSMKY 202
Query: 199 PS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
P+ K AKV++D T ++KG+GFV+F RA+ EM G ++ +R+G A
Sbjct: 203 PNQIKQAKVIVDSSTRKSKGFGFVKFHSPETMNRALKEMQGYTIGSKAIRVGLAAGSNVD 262
Query: 258 SASYQNSQVAQSD-------------DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 304
++S +++ DPNNT++ + L +T+ L + F +G +++
Sbjct: 263 TSSQPVTKLDHHRIPVPQPQPALNQFTDPNNTSLTISGLSGRITESELEQHFIGFGDIIY 322
Query: 305 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
++ + G+V+F RS E A + G + ++++WG S
Sbjct: 323 CRVSRDYQTGYVKFYSRSATESAFLNMYGYMINDCRLQIAWGSS 366
>gi|392568189|gb|EIW61363.1| hypothetical protein TRAVEDRAFT_26986 [Trametes versicolor
FP-101664 SS1]
Length = 950
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 145/298 (48%), Gaps = 54/298 (18%)
Query: 9 VPPPPPPMAAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQP--QAQPPAMWATQAAAPQAA 66
V P PP+ + + + +PP+ P SP + PP P +++ + Q P
Sbjct: 150 VQPSAPPLVLNHHH--RPSPPRGLPDIYTSPLLASSPPFPDRESRDAFLNQRQQHQPTPL 207
Query: 67 GVAVPPQQ-------QGQPGEIRTLWIGDLQYWMDETYLN-TCFAHTGEVVAVKVIR--- 115
V +PP Q P TLW G+L+ WMDE Y C + V +KV R
Sbjct: 208 SVQLPPAQPQSLSSPNSAPSARTTLWWGELEPWMDEEYAKQVCTLMGWDPVGIKVPRPAP 267
Query: 116 NKQTGQIE---GYGFIEFISRAGAERVLQTFNGTP----MPNGEQNFRLNWASFGA---- 164
+ TGQ GY F+ F +++ A VLQ N + MPN + F LNWAS
Sbjct: 268 DAITGQQANNPGYCFLTFPTQSHAASVLQQVNTSNAPLIMPNSAKQFSLNWASSVPSAPL 327
Query: 165 ------------GEKRDDTP-DHTIFVGDLAADVTDYMLQETFRA--------RYP---- 199
G + P +++IFVGDLA +V++ L FR R P
Sbjct: 328 PAAMPGQTISIPGVQNPQYPKEYSIFVGDLAPEVSNSDLVAVFRNPVLGLRNDREPRFIR 387
Query: 200 ---STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
S K AK+++D +TG ++GYGFVRF DES+Q RA+ EM+G++C +RPMRI PAT K
Sbjct: 388 PFLSCKSAKIMLDPVTGVSRGYGFVRFTDESDQQRALIEMHGLYCLSRPMRISPATAK 445
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 54/80 (67%)
Query: 269 SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEAL 328
+ DP NTTVFVG L ++ ++ LR F+ +G++ +VK+P GK CGFVQF + AE A+
Sbjct: 613 TSSDPYNTTVFVGGLSPLINEDTLRTFFAPFGEIHYVKVPVGKHCGFVQFVRKPDAERAI 672
Query: 329 RMLNGTQLGGQNIRLSWGRS 348
+ G +GG IRLSWGRS
Sbjct: 673 EKMQGFPIGGSRIRLSWGRS 692
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L ++E L T FA GE+ VKV K GF++F+ + AER ++
Sbjct: 621 TVFVGGLSPLINEDTLRTFFAPFGEIHYVKVPVGKHC------GFVQFVRKPDAERAIEK 674
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 675 MQGFPI--GGSRIRLSW 689
>gi|442760033|gb|JAA72175.1| Putative trna selenocysteine 1-associated protein 1 [Ixodes
ricinus]
Length = 226
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 114/203 (56%), Gaps = 26/203 (12%)
Query: 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
G TLW+GDL+ MDE ++ F GE V VK+IRN+ TG GYGF++F A+
Sbjct: 3 GSASTLWMGDLEPTMDEYFVQQAFTMMGENPVHVKIIRNRITGMPRGYGFLDFGDEEAAQ 62
Query: 138 RVLQTFNGTPMPNGEQ--NFRLNWASFGAG---------------------EKRDDTPDH 174
R L NG P+PN Q FRLN A+ G G ++ + +
Sbjct: 63 RALLRCNGRPIPNATQPKTFRLNHANNGTGTGGGGGGGGGGSYGNYSSGGRQQYGSSSEF 122
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++FVGDL+++V D L F RYPS K AKVV+D+ +G +KG+GFVRF DESE A+
Sbjct: 123 SMFVGDLSSEVDDGHLYHAFSQRYPSVKAAKVVLDQ-SGLSKGFGFVRFSDESEYQEALV 181
Query: 235 EM-NGVFCSTRPMRIGPATNKKT 256
+M + + ++P+R+G A ++
Sbjct: 182 DMQHSLLVGSKPIRVGVANPRRV 204
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 91/197 (46%), Gaps = 35/197 (17%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GDL + +Y +Q+ F + K++ +R+TG +GYGF+ FGDE RA+
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFTMMGENPVHVKIIRNRITGMPRGYGFLDFGDEEAAQRALL 66
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVA---------------------QSDDDP 273
NG RP I AT KT ++ N+ Q
Sbjct: 67 RCNG-----RP--IPNATQPKTFRLNHANNGTGTGGGGGGGGGGSYGNYSSGGRQQYGSS 119
Query: 274 NNTTVFVGNLDSIVTDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEA 327
+ ++FVG+L S V D HL FSQ ++V + K GFV+F+D S +EA
Sbjct: 120 SEFSMFVGDLSSEVDDGHLYHAFSQRYPSVKAAKVVLDQSGLSKGFGFVRFSDESEYQEA 179
Query: 328 L-RMLNGTQLGGQNIRL 343
L M + +G + IR+
Sbjct: 180 LVDMQHSLLVGSKPIRV 196
>gi|427786393|gb|JAA58648.1| Putative trna selenocysteine 1-associated protein 1 [Rhipicephalus
pulchellus]
Length = 225
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 115/207 (55%), Gaps = 28/207 (13%)
Query: 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
G TLW+GDL+ MDE ++ F+ GE V VK+IR++ TG GYGF++F AE
Sbjct: 3 GSASTLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAE 62
Query: 138 RVLQTFNGTPMPNGEQ--NFRLNWA--------------------SFGAGEK---RDDTP 172
R L NG P+PN Q FRLN A + G G + +
Sbjct: 63 RALLRCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSN 122
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ ++FVGDL+ADV D +L + F RYPS + AKVV+D TG +KG+GFVRF D +E A
Sbjct: 123 ELSMFVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLDP-TGLSKGFGFVRFSDGTEYQEA 181
Query: 233 MTEM-NGVFCSTRPMRIGPATNKKTVS 258
+ +M + + ++P+R+G A ++ +
Sbjct: 182 LVDMQHSLLVGSKPIRVGVANPRRAAA 208
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GDL + +Y +Q+ F + K++ DRLTG +GYGF+ FGDE RA+
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAERALL 66
Query: 235 EMNGV----FCSTRPMRIGPATNKKTVSASYQNSQVA------------QSDDDPNNTTV 278
NG + R+ A N Q N ++
Sbjct: 67 RCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSNELSM 126
Query: 279 FVGNLDSIVTDEHLRELFSQ-YGQLVHVKI---PAG--KRCGFVQFADRSCAEEAL-RML 331
FVG+L + V D L + FSQ Y + K+ P G K GFV+F+D + +EAL M
Sbjct: 127 FVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLDPTGLSKGFGFVRFSDGTEYQEALVDMQ 186
Query: 332 NGTQLGGQNIRL 343
+ +G + IR+
Sbjct: 187 HSLLVGSKPIRV 198
>gi|256082950|ref|XP_002577714.1| tRNA selenocysteine associated protein (secp43) [Schistosoma
mansoni]
gi|360043607|emb|CCD81153.1| putative trna selenocysteine associated protein (secp43)
[Schistosoma mansoni]
Length = 348
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 110/180 (61%), Gaps = 14/180 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
T+W+GDL+ +MDE ++ F +GE +V+VKVIRNK TGQ GYGFIEF + A +
Sbjct: 6 HTIWMGDLEPYMDEMFIKRAFETSGENIVSVKVIRNKATGQTLGYGFIEFANSTSARDAM 65
Query: 141 QTFNGTPMPNG-EQNFRLNWASFGAGEKRDDTPDH--TIFVGDLAADVTDYMLQETFRAR 197
NG +P + F+LN AS+G +D T + ++FVG+L DV D L F+ +
Sbjct: 66 LKLNGKLIPGAPTRRFKLNHASYG----KDSTSSNECSLFVGELTEDVDDLALFNAFK-K 120
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST--RPMRIGPATNKK 255
YP+ + AKVV+ G+++GYGFVRF ES+ +A+ EM +C +P+R+ A K+
Sbjct: 121 YPTCRSAKVVM--TNGKSRGYGFVRFLTESDMDKALIEMQN-YCGLGYKPIRVSLAIPKR 177
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 15/177 (8%)
Query: 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
HTI++GDL + + ++ F + KV+ ++ TG+T GYGF+ F + + AM
Sbjct: 6 HTIWMGDLEPYMDEMFIKRAFETSGENIVSVKVIRNKATGQTLGYGFIEFANSTSARDAM 65
Query: 234 TEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG P R K ASY + N ++FVG L V D L
Sbjct: 66 LKLNGKLIPGAPTR-----RFKLNHASYGKDSTSS-----NECSLFVGELTEDVDDLALF 115
Query: 294 ELFSQY--GQLVHVKIPAGKR--CGFVQFADRSCAEEAL-RMLNGTQLGGQNIRLSW 345
F +Y + V + GK GFV+F S ++AL M N LG + IR+S
Sbjct: 116 NAFKKYPTCRSAKVVMTNGKSRGYGFVRFLTESDMDKALIEMQNYCGLGYKPIRVSL 172
>gi|443687463|gb|ELT90434.1| hypothetical protein CAPTEDRAFT_110688, partial [Capitella teleta]
Length = 353
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 142/280 (50%), Gaps = 13/280 (4%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E L F G K+I +TG E Y F+EF + A L T N
Sbjct: 1 YVGNLDPTVTEDLLMALFGSIGPCKGCKIIH--ETGN-EPYAFVEFSEHSSAALALGTMN 57
Query: 145 GTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKG 203
E ++NWA+ G K+D + H IFVGDL+ D+ L+E F+ + +
Sbjct: 58 KRTCFGRE--MKVNWATSPGTQTKQDTSKHHHIFVGDLSPDIETPQLREAFKP-FGTISD 114
Query: 204 AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ- 262
K++ D T ++KGYGFV + + E A+ MNG + +R +R A K A+ +
Sbjct: 115 CKIIRDPQTLKSKGYGFVSYVERKEAENAINSMNGQWIGSRAIRTNWAIRKPAAPATKET 174
Query: 263 NSQVAQSDD-----DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 317
N+Q D+ P N TV+ G + S +T++ +R F ++G++ +++ K F++
Sbjct: 175 NAQPLTFDEVFKKSSPTNCTVYCGGILSGLTEDLVRSAFGEHGKIEEIRVFKDKGYAFIR 234
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD 357
+ + A EA+ ++ T++GG ++ SWG+ + A P+
Sbjct: 235 YNTKEAATEAIVKMHQTEVGGHTVKCSWGKESKDSPADPN 274
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 78/171 (45%), Gaps = 26/171 (15%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL ++ L F G + K+IR+ QT + +GYGF+ ++ R AE + +
Sbjct: 88 IFVGDLSPDIETPQLREAFKPFGTISDCKIIRDPQTLKSKGYGFVSYVERKEAENAINSM 147
Query: 144 NGTPMPNGEQNFRLNWA-----------------SFGAGEKRDDTPDHTIFVGDLAADVT 186
NG + G + R NWA +F K+ + T++ G + + +T
Sbjct: 148 NGQWI--GSRAIRTNWAIRKPAAPATKETNAQPLTFDEVFKKSSPTNCTVYCGGILSGLT 205
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
+ +++ F + + +V D KGY F+R+ + A+ +M+
Sbjct: 206 EDLVRSAF-GEHGKIEEIRVFKD------KGYAFIRYNTKEAATEAIVKMH 249
>gi|300796220|ref|NP_001179985.1| nucleolysin TIAR [Bos taurus]
gi|296472594|tpg|DAA14709.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Bos taurus]
Length = 380
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 163/344 (47%), Gaps = 23/344 (6%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ GQP RTL++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYE 57
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQE 192
A L NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++
Sbjct: 58 HRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKS 115
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT
Sbjct: 116 AF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 174
Query: 253 NKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV 305
K S Q + Q + P N TV+ G + S +TD+ +R+ FS +GQ++ +
Sbjct: 175 RKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEI 234
Query: 306 KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQAQPDPNQWNAG 364
++ K FV+F+ A A+ +NGT + G ++ WG+ SP + ++
Sbjct: 235 RVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVIRFFVD 294
Query: 365 YYGYAQGYENYGYAAAAPQDPSMYYGG---YPGYGNYQQPQQPQ 405
Y + Q + YG PQ Y P YG Y QP Q
Sbjct: 295 YSQWGQWSQVYG----NPQQYGQYMANGWQVPPYGVYGQPWNQQ 334
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 84 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 143
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 144 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 201
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 202 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 254
Query: 231 RAMTEMNG 238
A+ +NG
Sbjct: 255 HAIVSVNG 262
>gi|357610697|gb|EHJ67099.1| TIA-1-related RNA binding protein [Danaus plexippus]
Length = 388
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 144/291 (49%), Gaps = 19/291 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E +L F GEV K+IR + Y F+EF + A A L
Sbjct: 8 KTLYVGNLDASVTEEFLCALFGQIGEVKGCKIIREPGN---DPYAFLEFTNHASAATALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETFRARYPS 200
N E+ ++NWA+ + + DT +H IFVGDL+ ++ ++L+E F A +
Sbjct: 65 AMNRRVFL--EKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILREAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
++V D T ++KGY FV F +++ A+ MNG + +R +R +T K
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPTKGP 181
Query: 261 YQ----NSQVAQSDDD-------PNNTTVFVGNLDS-IVTDEHLRELFSQYGQLVHVKIP 308
+ + +V Q D P NTTV+ G S ++T+E ++ FSQ+GQ+ V++
Sbjct: 182 NEGAPSSKRVKQPTFDEVYNQSSPTNTTVYCGGFTSNVITEELMQSTFSQFGQIQDVRVF 241
Query: 309 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPN 359
K F++F + A A+ + T++ G ++ WG+ + Q N
Sbjct: 242 RDKGYAFIRFTTKEAAAHAIEATHNTEISGHTVKCFWGKENGGTENQSTTN 292
>gi|297742974|emb|CBI35841.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 149/293 (50%), Gaps = 31/293 (10%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + E L FA TG V K++R +++ YGFI + R A +
Sbjct: 39 CRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKLVRKEKSS----YGFIHYFDRRSAALAI 94
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
+ NG + Q ++NWA + +G++ D + IFVGDL+ +VTD L F +PS
Sbjct: 95 LSLNGRHLFG--QPIKVNWA-YASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-FPS 150
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN------- 253
A+V+ D+ TGR++G+GFV F ++ + A+ ++ G + +R +R AT
Sbjct: 151 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDITGKWLGSRQIRCNWATKGAGSNDD 210
Query: 254 ------KKTVSASYQNSQVAQS-------DDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 300
K V + +S+ + D++P TTV+VGNL VT L F +G
Sbjct: 211 KQSSDAKSVVELTNGSSEDGKETATNEAPDNNPQYTTVYVGNLAPEVTQLDLHRHFHTFG 270
Query: 301 QLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 350
V V++ K GFV++ + A A++M N + L G+ I+ SWG P+
Sbjct: 271 AGVIEEVRVQRDKGFGFVRYNTHAEAALAIQMGNTQSILCGKPIKCSWGSKPT 323
>gi|426223384|ref|XP_004005855.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Ovis aries]
Length = 375
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 160/340 (47%), Gaps = 31/340 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K S
Sbjct: 122 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKST 181
Query: 262 QNSQVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
S Q D P+N TV+ G + S +T++ +R+ FS +GQ++ +++ K
Sbjct: 182 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYS 241
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQPDPNQWNAGYYGY 368
FV+F A A+ +NGT + G ++ WG+ +P +Q Q GY
Sbjct: 242 FVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQ----------IGY 291
Query: 369 AQGYENYGYAAAAPQDPSMYY-GGY--PGYGNYQQPQQPQ 405
Q Y +G Q Y G+ P YG Y QP Q
Sbjct: 292 PQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQPWNQQ 331
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 21/184 (11%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFYEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
A+ MNG + +++ AT +Q D N+ VFVG+L +
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWATTPS-----------SQKKDTSNHFHVFVGDLSPEI 106
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ I
Sbjct: 107 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 166
Query: 342 RLSW 345
R +W
Sbjct: 167 RTNW 170
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 82 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 141
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 142 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSS 199
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 200 PSNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAA 252
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 253 HAIVSVNGT 261
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|225442061|ref|XP_002270823.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]
Length = 420
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 149/293 (50%), Gaps = 31/293 (10%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + E L FA TG V K++R +++ YGFI + R A +
Sbjct: 52 CRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKLVRKEKSS----YGFIHYFDRRSAALAI 107
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
+ NG + Q ++NWA + +G++ D + IFVGDL+ +VTD L F +PS
Sbjct: 108 LSLNGRHLFG--QPIKVNWA-YASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-FPS 163
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN------- 253
A+V+ D+ TGR++G+GFV F ++ + A+ ++ G + +R +R AT
Sbjct: 164 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDITGKWLGSRQIRCNWATKGAGSNDD 223
Query: 254 ------KKTVSASYQNSQVAQS-------DDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 300
K V + +S+ + D++P TTV+VGNL VT L F +G
Sbjct: 224 KQSSDAKSVVELTNGSSEDGKETATNEAPDNNPQYTTVYVGNLAPEVTQLDLHRHFHTFG 283
Query: 301 QLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 350
V V++ K GFV++ + A A++M N + L G+ I+ SWG P+
Sbjct: 284 AGVIEEVRVQRDKGFGFVRYNTHAEAALAIQMGNTQSILCGKPIKCSWGSKPT 336
>gi|255724936|ref|XP_002547397.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135288|gb|EER34842.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 451
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 144/284 (50%), Gaps = 20/284 (7%)
Query: 84 LWIGDLQ-YWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+GDL W ++ + VK++R+K Y F+ F + + +Q
Sbjct: 84 LWMGDLDPNWTEDWITELWTKLVSKPQHVKLMRDKLNPSRASYCFVTFKDQESVDLAIQR 143
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDD----TPDHTIFVGDLAADVTDYMLQETFRARY 198
NG +P+ ++ F+LN + + ++++ D ++F+GDL +V+D L F +Y
Sbjct: 144 -NGQKVPDSDRFFKLNHSGKHSSGRQENHGAHIADFSMFIGDLVPEVSDATLFSKFNTKY 202
Query: 199 PS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
P+ K AKV++D T ++KG+GFV+F +A+TEM G ++ +R+G A T
Sbjct: 203 PNQIKQAKVIVDLNTKKSKGFGFVKFFTAEVMNKALTEMQGYIIGSKAIRVGLAAGSTTD 262
Query: 258 SAS-------YQNSQVAQSD------DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 304
S + Y +AQ DPNN ++ + L S +T+ L++ F +G L++
Sbjct: 263 STTQPITKFDYHKIHIAQQQPPLNQVTDPNNNSLTIRGLASQITEIELKQHFIAFGDLIY 322
Query: 305 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
++ + G+V+F R+ AE A L+G + +++SWG S
Sbjct: 323 CQVSNDYQTGYVKFYSRAAAETAFMNLHGYIINDCRLQISWGSS 366
>gi|226528044|dbj|BAH56564.1| TIA-1-related RNA binding protein [Spodoptera litura]
Length = 388
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 155/327 (47%), Gaps = 37/327 (11%)
Query: 76 GQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAG 135
G +TL++G+L + E ++ T F GEV K+IR + Y F+EF S
Sbjct: 2 GDESHPKTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGN---DPYAFLEFTSHTA 58
Query: 136 AERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETF 194
A L N + + E ++NWA+ + + DT +H IFVGDL+ ++ ++L++ F
Sbjct: 59 AATALAAMNKRVVLDKE--MKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAF 116
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
A + ++V D T ++KGY FV F +++ A+ MNG + +R +R +T K
Sbjct: 117 -APFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRK 175
Query: 255 ----------KTVSASYQNSQVAQSDDDPNNTTVFVGNLDS-IVTDEHLRELFSQYGQLV 303
+ A + P NTTV+ G S ++T++ ++ FSQ+GQ+
Sbjct: 176 PPSKPNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNVITEDLMQNTFSQFGQIQ 235
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR--------SPSNKQAQ 355
V++ K F++F + A A+ + T++ G ++ WG+ S +N A
Sbjct: 236 DVRVFRDKGYAFIRFTTKEAAAHAIEATHNTEISGHIVKCFWGKENGGGDNQSTNNATAA 295
Query: 356 PD----------PNQWNAGYYGYAQGY 372
P P Q GY+ YAQGY
Sbjct: 296 PPAMGAQTQYPYPYQQGMGYW-YAQGY 321
>gi|68485797|ref|XP_713179.1| hypothetical protein CaO19.9432 [Candida albicans SC5314]
gi|68485890|ref|XP_713133.1| hypothetical protein CaO19.1876 [Candida albicans SC5314]
gi|46434612|gb|EAK94016.1| hypothetical protein CaO19.1876 [Candida albicans SC5314]
gi|46434659|gb|EAK94062.1| hypothetical protein CaO19.9432 [Candida albicans SC5314]
Length = 452
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 144/282 (51%), Gaps = 20/282 (7%)
Query: 84 LWIGDLQ-YWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+W+GDL W +E+ N + VK++R++ Y F+ F + + +Q
Sbjct: 85 MWMGDLDPQWTEESIDNLWTKLVSKPHHVKIMRDRLQPSKPSYCFVTFRDQESIDLAIQR 144
Query: 143 FNGTPMPNGEQNFRLNWA---SFGAGEKRDDTP-DHTIFVGDLAADVTDYMLQETFRARY 198
NG +P+ + F+LN++ S G+ ++ ++ +++IF+GDLA +V+D L F +Y
Sbjct: 145 -NGQKVPDSNRVFKLNYSGRNSTGSHDRSTNSSNEYSIFIGDLAPEVSDAALYNKFNMKY 203
Query: 199 PS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA------ 251
P+ K AKV+ D T ++KG+GFV+F RA+ EM G ++ +R+G A
Sbjct: 204 PNQIKQAKVITDSSTRKSKGFGFVKFHSPDIMNRALKEMQGYNIGSKAIRVGLAAGSHVD 263
Query: 252 -TNKKTVSASYQNSQVAQSD------DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 304
+ K + V QS DPNNT+ +G L +T+ L + F +G LV+
Sbjct: 264 TSFKPVTKLDHHRVPVPQSQPALNQFTDPNNTSFTIGGLSGRITESELEQHFIGFGDLVY 323
Query: 305 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 346
++ + G+++F RS AE A + G + ++++WG
Sbjct: 324 CRVSKDYQTGYIKFYSRSAAESAFLNMYGFMINDCRLQITWG 365
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 74/181 (40%), Gaps = 18/181 (9%)
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
D +++GDL T+ + + K++ DRL Y FV F D+ E +
Sbjct: 82 DFQMWMGDLDPQWTEESIDNLWTKLVSKPHHVKIMRDRLQPSKPSYCFVTFRDQ-ESIDL 140
Query: 233 MTEMNG--VFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDE 290
+ NG V S R ++ + T S +S + N ++F+G+L V+D
Sbjct: 141 AIQRNGQKVPDSNRVFKLNYSGRNSTGSHD-------RSTNSSNEYSIFIGDLAPEVSDA 193
Query: 291 HLRELFSQY--GQLVHVKIPA------GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
L F+ Q+ K+ K GFV+F AL+ + G +G + IR
Sbjct: 194 ALYNKFNMKYPNQIKQAKVITDSSTRKSKGFGFVKFHSPDIMNRALKEMQGYNIGSKAIR 253
Query: 343 L 343
+
Sbjct: 254 V 254
>gi|302694831|ref|XP_003037094.1| hypothetical protein SCHCODRAFT_84062 [Schizophyllum commune H4-8]
gi|300110791|gb|EFJ02192.1| hypothetical protein SCHCODRAFT_84062 [Schizophyllum commune H4-8]
Length = 435
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 142/303 (46%), Gaps = 43/303 (14%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYLDMRAAETALQ 76
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D T + +FVGDL+ +V D +L + F A + +
Sbjct: 77 TLNGRRIFDTE--IRVNWAYQGQQNKEDTTNHYHVFVGDLSPEVNDDVLAKAFSA-FGTL 133
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK------ 255
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A K
Sbjct: 134 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSLGG 193
Query: 256 -------------------------------TVSASYQNSQVAQSDDDPNNTTVFVGNLD 284
++ + + + NTTV+VGNL
Sbjct: 194 GGGGGGPVGSPIGGPPAMARPMGAGGAPAPMNLAGGPLSYEQVLTQTPAYNTTVYVGNLV 253
Query: 285 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 344
T L LF G L +++ A + FV+ A A+ L G + G+ I+ S
Sbjct: 254 PYCTQADLIPLFQTIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCS 313
Query: 345 WGR 347
WG+
Sbjct: 314 WGK 316
>gi|427778835|gb|JAA54869.1| Putative trna selenocysteine 1-associated protein 1 [Rhipicephalus
pulchellus]
Length = 236
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 115/207 (55%), Gaps = 28/207 (13%)
Query: 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
G TLW+GDL+ MDE ++ F+ GE V VK+IR++ TG GYGF++F AE
Sbjct: 3 GSASTLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAE 62
Query: 138 RVLQTFNGTPMPNGEQ--NFRLNWA--------------------SFGAGEK---RDDTP 172
R L NG P+PN Q FRLN A + G G + +
Sbjct: 63 RALLRCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSN 122
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ ++FVGDL+ADV D +L + F RYPS + AKVV+D TG +KG+GFVRF D +E A
Sbjct: 123 ELSMFVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLDP-TGLSKGFGFVRFSDGTEYQEA 181
Query: 233 MTEM-NGVFCSTRPMRIGPATNKKTVS 258
+ +M + + ++P+R+G A ++ +
Sbjct: 182 LVDMQHSLLVGSKPIRVGVANPRRAAA 208
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 92/199 (46%), Gaps = 37/199 (18%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+++GDL + +Y +Q+ F + K++ DRLTG +GYGF+ FGDE RA+
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAERALL 66
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVA-----------------------QSDD 271
NG +P I A KT ++ N+ Q
Sbjct: 67 RCNG-----KP--IPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGS 119
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQ-YGQLVHVKI---PAG--KRCGFVQFADRSCAE 325
N ++FVG+L + V D L + FSQ Y + K+ P G K GFV+F+D + +
Sbjct: 120 SSNELSMFVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLDPTGLSKGFGFVRFSDGTEYQ 179
Query: 326 EAL-RMLNGTQLGGQNIRL 343
EAL M + +G + IR+
Sbjct: 180 EALVDMQHSLLVGSKPIRV 198
>gi|410900508|ref|XP_003963738.1| PREDICTED: nucleolysin TIAR-like isoform 3 [Takifugu rubripes]
Length = 395
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 147/279 (52%), Gaps = 12/279 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G + K+I + + + Y F+EF+ A
Sbjct: 8 KTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTSS--DPYCFVEFVDHKDAASARA 65
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T N + E ++NWA+ + +K+D + +FVGDL+ D+T ++ F A +
Sbjct: 66 TMNKRKILGKE--VKVNWATSPSCQKKDTSNHFHVFVGDLSPDITTEDIRAAF-APFGHI 122
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+V+ D TG++KGYGFV F ++ + A+++M G + R +R AT K S+
Sbjct: 123 SDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPAPKSF 182
Query: 262 QN--SQVAQSDD-----DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
Q+ S+ + DD P+N TV+ G + S +T+ +++ FS +GQ++ +++ K
Sbjct: 183 QDNGSKHLKFDDIVTQSSPHNCTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFPDKGYS 242
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
FV+F+ A A+ +NGT + G ++ WG+ + Q
Sbjct: 243 FVRFSSHDSAAHAIVSVNGTVIEGNLVKCFWGKESPDMQ 281
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 20/183 (10%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
+++ T++VG+L+ DVT+ ++ + F P K K++ D + + Y FV F D +
Sbjct: 3 EESLSKTLYVGNLSRDVTEILILQLFSQIGP-CKSCKMITDHTS--SDPYCFVEFVDHKD 59
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A MN + +G K V ++ S Q D N+ VFVG+L +T
Sbjct: 60 AASARATMN------KRKILG-----KEVKVNWATSPSCQKKDTSNHFHVFVGDLSPDIT 108
Query: 289 DEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
E +R F+ +G + ++ K GFV F ++ AE A+ + G L G+ IR
Sbjct: 109 TEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIR 168
Query: 343 LSW 345
+W
Sbjct: 169 TNW 171
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 270 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG----FVQFADRSCAE 325
D++ + T++VGNL VT+ + +LFSQ G K+ FV+F D A
Sbjct: 2 DEESLSKTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTSSDPYCFVEFVDHKDAA 61
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPS 350
A +N ++ G+ ++++W SPS
Sbjct: 62 SARATMNKRKILGKEVKVNWATSPS 86
>gi|7446337|pir||T15542 hypothetical protein C18A3.5 - Caenorhabditis elegans
Length = 448
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 150/316 (47%), Gaps = 54/316 (17%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI------------------------- 114
E RTL++G+L + E ++ T F G V KVI
Sbjct: 44 EPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDVSFSLWNKTNLYRKLLLARGIGV 103
Query: 115 ------------RNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF 162
+ +TG + Y F+EF A + LQT N + + E ++NWA
Sbjct: 104 PGYKCTRRQPIHTDTETGSNDPYAFVEFSDHGQASQALQTMNKRLLLDRE--MKVNWAVE 161
Query: 163 -GAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGF 220
G + + DT H +FVGDL+++V + L+E F+ + AKV+ D T ++KGYGF
Sbjct: 162 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQP-FGDVSDAKVIRDTNTTKSKGYGF 220
Query: 221 VRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--------KTVSASYQNSQVAQSDDD 272
V + E RA+ +MNG + R +R AT K SY S D
Sbjct: 221 VSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGD- 279
Query: 273 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLN 332
NT+V+VGN+ S+ DE +R+ F+ +G++ V+I + FV+F ++ A +A+ +N
Sbjct: 280 --NTSVYVGNIASLTEDE-IRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMN 336
Query: 333 GTQLGGQNIRLSWGRS 348
+GGQ +R SWG++
Sbjct: 337 NQDVGGQLVRCSWGKT 352
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 78/176 (44%), Gaps = 19/176 (10%)
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
Y T+ + D TG Y FV F D + +A+ MN R M++ A V
Sbjct: 106 YKCTRRQPIHTDTETGSNDPYAFVEFSDHGQASQALQTMNKRLLLDREMKVNWA-----V 160
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI------PAGK 311
Q S++ D + VFVG+L S V ++ LRE F +G + K+ K
Sbjct: 161 EPGQQQSKI----DTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSK 216
Query: 312 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG-RSPSNKQAQPDPNQWNAGYY 366
GFV + R AE A+ +NG LG + IR +W R P + Q P+ +N Y
Sbjct: 217 GYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGD---QEKPSHYNEKSY 269
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 32/187 (17%)
Query: 71 PPQQQGQPGEIRT--LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P QQQ + R +++GDL +D L F G+V KVIR+ T + +GYGF+
Sbjct: 162 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 221
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------- 174
+ R AER ++ NG + G + R NWA+ G++ + P H
Sbjct: 222 SYPKREEAERAIEQMNGQWL--GRRTIRTNWATRKPGDQ--EKPSHYNEKSYDEIYNQTS 277
Query: 175 ----TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+++VG++A+ +T+ +++ F A + ++ + +GY FV+F ++
Sbjct: 278 GDNTSVYVGNIAS-LTEDEIRQGF-ASFGRITEVRIF------KMQGYAFVKFDNKDAAA 329
Query: 231 RAMTEMN 237
+A+ +MN
Sbjct: 330 KAIVQMN 336
>gi|440297981|gb|ELP90622.1| nucleolysin TIA-1, putative [Entamoeba invadens IP1]
Length = 305
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 142/275 (51%), Gaps = 13/275 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+++ + L +DET L+ F+ G VV+ K++++K TG YGFIEFI AE +
Sbjct: 39 KSVHVAGLHESVDETLLSRIFSIVGHVVSCKIMKDK-TGTHARYGFIEFIDHTTAEFAKE 97
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NW + D +FVG L +VT+ +L + F A++
Sbjct: 98 NMNGRLVYGKE--LKVNWTH---DSQSDAKGSFKLFVGGLHTEVTNEILYQNF-AKFGRV 151
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI--GPATNKKTVSA 259
A+V+ +G+++GYGFV F + + AM MNG R +++ G AT K T +
Sbjct: 152 SDARVLRYSQSGKSQGYGFVTFIRKEDAETAMQMMNGEKIQGRTVKVNWGTATQKPTETV 211
Query: 260 SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFV 316
++++ + NN V+VG + + +R+LF +G+++ +KI A K GFV
Sbjct: 212 KRGFDEISRETSNTNNN-VYVGGIPKETEESTMRKLFGDFGEIIDLKIMRTDAEKAYGFV 270
Query: 317 QFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 351
+F A +A+ MLNG QL G + WG+ N
Sbjct: 271 RFVSHDNATKAIMMLNGYQLNGGCLNCMWGKESFN 305
>gi|196009388|ref|XP_002114559.1| hypothetical protein TRIADDRAFT_28438 [Trichoplax adhaerens]
gi|190582621|gb|EDV22693.1| hypothetical protein TRIADDRAFT_28438 [Trichoplax adhaerens]
Length = 292
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 138/278 (49%), Gaps = 19/278 (6%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
+IG+L E + FA G + K+I + G + YGF+E+ + A R L N
Sbjct: 8 YIGNLDRQTTEQSIGELFAKFGAIKRCKLI--TEHGGNDPYGFVEYAEKNSAARALDAMN 65
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
G G + ++NWA+ R DT + IFVGDL+ D+ +L+ F ++ A
Sbjct: 66 GYSF--GSRAIKVNWAT--NSSMRKDTNHYHIFVGDLSPDIDTTLLRSAFN-QFGHVSDA 120
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNS 264
+VV D TG+ +GYGFV + + E AM MNG + R +R AT K + + QNS
Sbjct: 121 RVVKDSATGKPRGYGFVSYQFKHEAENAMQSMNGAWLGGRNIRTNWATRKPGATTNRQNS 180
Query: 265 QVAQSDDDPN-----------NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 313
+ S N N TV+VGNL + T+E LR +F +G + +++ K
Sbjct: 181 D-SSSTKSLNYDEIYLQTAVYNCTVYVGNLSAGTTEETLRRIFIPFGPIADIRVFPDKNY 239
Query: 314 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 351
F+++ A A+ +++GT + G ++ SWG+ ++
Sbjct: 240 AFIRYMSHDHATNAIVVIHGTAVEGSQVKCSWGKEAND 277
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 30/176 (17%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL +D T L + F G V +V+++ TG+ GYGF+ + + AE +Q+
Sbjct: 93 IFVGDLSPDIDTTLLRSAFNQFGHVSDARVVKDSATGKPRGYGFVSYQFKHEAENAMQSM 152
Query: 144 NGTPMPNGEQNFRLNWASF--GAGEKRDDTP-------------------DHTIFVGDLA 182
NG + G +N R NWA+ GA R ++ + T++VG+L+
Sbjct: 153 NGAWL--GGRNIRTNWATRKPGATTNRQNSDSSSTKSLNYDEIYLQTAVYNCTVYVGNLS 210
Query: 183 ADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
A T+ L+ F P + D K Y F+R+ A+ ++G
Sbjct: 211 AGTTEETLRRIFIPFGP-------IADIRVFPDKNYAFIRYMSHDHATNAIVVIHG 259
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 279 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR----CGFVQFADRSCAEEALRMLNGT 334
++GNLD T++ + ELF+++G + K+ GFV++A+++ A AL +NG
Sbjct: 8 YIGNLDRQTTEQSIGELFAKFGAIKRCKLITEHGGNDPYGFVEYAEKNSAARALDAMNGY 67
Query: 335 QLGGQNIRLSWGRSPSNKQAQPDPNQWN 362
G + I+++W +N + D N ++
Sbjct: 68 SFGSRAIKVNW---ATNSSMRKDTNHYH 92
>gi|167391953|ref|XP_001739964.1| nucleolysin TIAR [Entamoeba dispar SAW760]
gi|165896141|gb|EDR23641.1| nucleolysin TIAR, putative [Entamoeba dispar SAW760]
Length = 306
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 160/341 (46%), Gaps = 50/341 (14%)
Query: 18 AHQYQYQQQAPPQ-----QQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPP 72
QY + Q PP+ QQ PPQ +P PP P
Sbjct: 2 TRQYDSRYQYPPRVPQLYQQRPPQQNPTETTEPPIPINANS------------------- 42
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+++ + + +DE L F+ G VV+ K++R+K +G GYGF+EF+
Sbjct: 43 ---------KSVHVSGIHESVDEILLGRIFSIVGHVVSCKIMRDK-SGTHAGYGFVEFVD 92
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQE 192
A +G + E ++NW S+ A ++++ + IFVG L +V D +L +
Sbjct: 93 STTARFAKDNMDGRVVYGRE--LKVNW-SYTA--QQENQGSYKIFVGGLQPEVNDDLLYK 147
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
TF+ ++ A+V+ TG++KGYGFV F + + AM MNG R +++
Sbjct: 148 TFQ-KFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIKV---- 202
Query: 253 NKKTVSASYQNSQVAQSDDDPNN------TTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 306
N T + + + Q +S D+ NN TV++GN+ V + L++L ++YG + V+
Sbjct: 203 NWVTSNIASKTEQPKRSYDEINNETSIQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVR 262
Query: 307 IPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
+ K F++F+ A A+ M NG + G +R SWGR
Sbjct: 263 LNKDKGYAFIKFSKHESATSAILMCNGKIINGSTLRCSWGR 303
>gi|41054740|ref|NP_957426.1| nucleolysin TIAR [Danio rerio]
gi|33416339|gb|AAH55501.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Danio
rerio]
Length = 370
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 149/307 (48%), Gaps = 19/307 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F G + K+I + + Y F+EF A L
Sbjct: 8 KTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSN--DPYCFVEFFEHRDAAAALA 65
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 66 AMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAF-APFGKI 122
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT K S
Sbjct: 123 SDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSV 182
Query: 262 QNSQVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
Q++ Q D P N TV+ G + S +T+ +R+ FS +GQ++ +++ K
Sbjct: 183 QDNSAKQLRFDEVVNQSSPQNCTVYCGGIQSGLTEHLMRQTFSPFGQIMEIRVFPEKGYS 242
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN--KQAQPDP----NQWNAGYYGY 368
F++F+ A A+ +NGT + G ++ WG+ + K QP QWN YG
Sbjct: 243 FIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMAKNVQPMEYGQWGQWNQ-MYGN 301
Query: 369 AQGYENY 375
Q Y Y
Sbjct: 302 PQQYGQY 308
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 20/184 (10%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D++ T++VG+L+ DVT+ ++ + F P K K++ + + Y FV F +
Sbjct: 2 EDESHPKTLYVGNLSRDVTENLILQLFTQIGP-CKSCKMITEHTS--NDPYCFVEFFEHR 58
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
+ A+ MNG + +++ AT +Q D N+ VFVG+L +
Sbjct: 59 DAAAALAAMNGRKILGKEVKVNWATTPS-----------SQKKDTSNHFHVFVGDLSPEI 107
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T + +R F+ +G++ ++ K GFV F ++ AE A+ + G LGG+ I
Sbjct: 108 TTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 167
Query: 342 RLSW 345
R +W
Sbjct: 168 RTNW 171
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 83 TTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFV 142
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 143 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSVQDNSAKQLRFDEVVNQSS 200
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T++++++TF P + +++ KGY F+RF
Sbjct: 201 PQNCTVYCGGIQSGLTEHLMRQTFS---PFGQ----IMEIRVFPEKGYSFIRFSSHESAA 253
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 254 HAIVSVNGT 262
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 270 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG----FVQFADRSCAE 325
+D+ + T++VGNL VT+ + +LF+Q G K+ FV+F + A
Sbjct: 2 EDESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAA 61
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 62 AALAAMNGRKILGKEVKVNWATTPSSQK 89
>gi|383863609|ref|XP_003707272.1| PREDICTED: nucleolysin TIAR-like [Megachile rotundata]
Length = 392
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 142/310 (45%), Gaps = 29/310 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E L F+ G V K+IR + Y F+EF + A L
Sbjct: 8 RTLYVGNLDSSVSEELLCALFSQIGAVKGCKIIREPGN---DPYAFVEFTNHQCAATALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N N E ++NWA+ G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRSFLNKE--MKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA- 259
++V D T ++KGY FV F +SE A+ MNG + +R +R +T K
Sbjct: 122 ISNCRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAAMNGQWLGSRSIRTNWSTRKPPPPRS 181
Query: 260 --------SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 311
S N + + P N TV+ G + +TDE + + FS +G + +++ K
Sbjct: 182 ERPRHSNNSKPNYEEVYNQSSPTNCTVYCGGFTNGITDELINKTFSPFGTIQDIRVFKDK 241
Query: 312 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS---------PSNKQAQPDPNQWN 362
F++F + A A+ + T++ G ++ WG+ +N QAQ Q
Sbjct: 242 GYAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQAQ----QVT 297
Query: 363 AGYYGYAQGY 372
AG YA GY
Sbjct: 298 AGAGQYAYGY 307
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 270 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEE 326
++ N T++VGNLDS V++E L LFSQ G + KI P FV+F + CA
Sbjct: 2 SEESNPRTLYVGNLDSSVSEELLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAAT 61
Query: 327 ALRMLNGTQLGGQNIRLSWGRSPSNK 352
AL +N + ++++W SP N+
Sbjct: 62 ALAAMNKRSFLNKEMKVNWATSPGNQ 87
>gi|229594706|ref|XP_001022345.3| RNA binding protein [Tetrahymena thermophila]
gi|225566688|gb|EAS02100.3| RNA binding protein [Tetrahymena thermophila SB210]
Length = 482
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 108/202 (53%), Gaps = 27/202 (13%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
++RTLW+GD++ WM E ++ + F G+VV+VK+IR K+T GY F+EF + AER+
Sbjct: 5 DLRTLWVGDIENWMTEQFIESVFNKVGKVVSVKLIRTKETSLPAGYCFVEFQTHEQAERI 64
Query: 140 LQTFNGTPMPNGEQNFRLNW----------------ASFGAGEKRDD-----------TP 172
L +N +P + FR+NW A+ G G +
Sbjct: 65 LMNYNQQLIPGTQNTFRMNWGKNPTNTGIIKQPTTQANNGYGNNQYGMMQQPVIQMPPIQ 124
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ +I+VG+L + + L E FR++Y S G+K++ + + +KGYGFV+F + E RA
Sbjct: 125 EFSIYVGELELGINEQQLAEHFRSKYSSVIGSKIITEPTSKMSKGYGFVKFSNPIEGQRA 184
Query: 233 MTEMNGVFCSTRPMRIGPATNK 254
+ EMNG + +++ A ++
Sbjct: 185 IHEMNGSLFKGKFIKVSQAVSR 206
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 277 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRM 330
T++VG++++ +T++ + +F++ G++V VK+ K FV+F AE L
Sbjct: 8 TLWVGDIENWMTEQFIESVFNKVGKVVSVKLIRTKETSLPAGYCFVEFQTHEQAERILMN 67
Query: 331 LNGTQL-GGQN-IRLSWGRSPSNKQAQPDP-NQWNAGY 365
N + G QN R++WG++P+N P Q N GY
Sbjct: 68 YNQQLIPGTQNTFRMNWGKNPTNTGIIKQPTTQANNGY 105
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 80/199 (40%), Gaps = 26/199 (13%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T++VGD+ +T+ ++ F + K++ + T GY FV F + R +
Sbjct: 8 TLWVGDIENWMTEQFIESVFN-KVGKVVSVKLIRTKETSLPAGYCFVEFQTHEQAERILM 66
Query: 235 EMNGVFC--STRPMRIGPATNKKTVSASYQNSQVAQSDDDPN----------------NT 276
N + R+ N Q + A + N
Sbjct: 67 NYNQQLIPGTQNTFRMNWGKNPTNTGIIKQPTTQANNGYGNNQYGMMQQPVIQMPPIQEF 126
Query: 277 TVFVGNLDSIVTDEHLRELF-SQYGQLVHVKI---PAGKRC---GFVQFADRSCAEEALR 329
+++VG L+ + ++ L E F S+Y ++ KI P K GFV+F++ + A+
Sbjct: 127 SIYVGELELGINEQQLAEHFRSKYSSVIGSKIITEPTSKMSKGYGFVKFSNPIEGQRAIH 186
Query: 330 MLNGTQLGGQNIRLSWGRS 348
+NG+ G+ I++S S
Sbjct: 187 EMNGSLFKGKFIKVSQAVS 205
>gi|168027694|ref|XP_001766364.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682273|gb|EDQ68692.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 405
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 148/297 (49%), Gaps = 34/297 (11%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
R++++G++ + E L FA G + K+IR ++ YGF+++ A
Sbjct: 19 SCRSVYVGNIHSRVTEGLLAEVFASLGPLEGCKLIRKDKSS----YGFVDYFDHRSAVAA 74
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARY 198
L T NG M Q+ ++NWA + +G++ D T H +FVGDL+A+VTD L F Y
Sbjct: 75 LSTLNGRQMFG--QSIKVNWA-YASGQREDTTAGHFNVFVGDLSAEVTDATLFAAF-CIY 130
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG-PATNKKTV 257
PS A+V+ D+ +GR++G+GFV F + E +++EM G + TRP+R A T+
Sbjct: 131 PSCSDARVMWDQRSGRSRGFGFVSFRSQQEAESSISEMTGKWLGTRPIRCNWAAKTNNTI 190
Query: 258 SAS------------------YQNSQVAQSDDDPN----NTTVFVGNLDSIVTDEHLREL 295
A ++ Q + + D P TTV+VGNL +T L
Sbjct: 191 QADESKLTTRGLTLCCLADVRSEDRQDSSAGDGPEINSQYTTVYVGNLSQQITQAELHRQ 250
Query: 296 FSQYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
F G V V++ K GFV++ + A A++ NG + G++++ SWG P+
Sbjct: 251 FHSLGAGVIEDVRVQKEKGFGFVRYRTHAEAAFAIQAANGRVIWGKSLKCSWGSKPT 307
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D T +++VG++ + VT+ +L E F + P +G K++ YGFV + D
Sbjct: 16 DATSCRSVYVGNIHSRVTEGLLAEVFASLGP-LEGCKLIRK----DKSSYGFVDYFDHRS 70
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
+ A++ +NG R M G + V+ +Y + Q + D + VFVG+L + VT
Sbjct: 71 AVAALSTLNG-----RQM-FGQSIK---VNWAYASGQ--REDTTAGHFNVFVGDLSAEVT 119
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L F Y ++ +R GFV F + AE ++ + G LG + IR
Sbjct: 120 DATLFAAFCIYPSCSDARVMWDQRSGRSRGFGFVSFRSQQEAESSISEMTGKWLGTRPIR 179
Query: 343 LSWGRSPSNKQAQPDPNQ 360
+W + +N Q D ++
Sbjct: 180 CNWA-AKTNNTIQADESK 196
>gi|321262697|ref|XP_003196067.1| non-translatable mRNA -binding protein [Cryptococcus gattii WM276]
gi|317462542|gb|ADV24280.1| Non-translatable mRNA -binding protein, putative [Cryptococcus
gattii WM276]
Length = 434
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 148/323 (45%), Gaps = 49/323 (15%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGF 127
+ P Q + + L++G+L + + L FA G VV+ K+I RN Q G YGF
Sbjct: 10 ITPGQSAEAPKRPHLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFN-YGF 68
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTD 187
+E+ AE+ L T NG + + E R+NWA G K D + +FVGDL+ +V D
Sbjct: 69 VEYADMRSAEQALTTLNGRKIFDAE--IRVNWAYQGNQNKEDTQHHYHVFVGDLSPEVND 126
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
+L + F A + S A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R
Sbjct: 127 DVLSKAFGA-FGSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAIR 185
Query: 248 IGPATNKKT--------------------------VSASYQNS----------------- 264
+ A K V ++Y +
Sbjct: 186 VNWANQKTQTGGTRTGGGTPSYSAPPMGAPPVPAGVPSAYGAAAPGVVPGVGVGGAVGSF 245
Query: 265 QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 324
+ S NTTV+VGNL T L LF YG +V +++ A + FV+ A
Sbjct: 246 ETVASQTPEFNTTVYVGNLIPYTTQADLIPLFQGYGYIVEIRMQADRGFAFVKLDTHQNA 305
Query: 325 EEALRMLNGTQLGGQNIRLSWGR 347
A+ L + G+ I+ SWG+
Sbjct: 306 ALAITHLQNQLVHGRPIKCSWGK 328
>gi|147797981|emb|CAN65009.1| hypothetical protein VITISV_027348 [Vitis vinifera]
Length = 420
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 148/293 (50%), Gaps = 31/293 (10%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + E L FA TG V K++R +++ YGFI + R A +
Sbjct: 52 CRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKLVRKEKSS----YGFIHYFDRRSAALAI 107
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
+ NG + Q ++NWA + +G++ D + IFVGDL+ +VTD L F +PS
Sbjct: 108 LSLNGRHLFG--QPIKVNWA-YASGQREDTSGHFNIFVGDLSPEVTDATLFACFSV-FPS 163
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN------- 253
A+V+ D+ TGR++G+GFV F ++ A+ ++ G + +R +R AT
Sbjct: 164 CSDARVMWDQKTGRSRGFGFVSFRNQQVAQSAINDITGKWLGSRQIRCNWATKGAGSNDD 223
Query: 254 ------KKTVSASYQNSQVAQS-------DDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 300
K V + +S+ + D++P TTV+VGNL VT L F +G
Sbjct: 224 KQSSDAKSVVELTNGSSEDGKETATNEAPDNNPQYTTVYVGNLAPEVTQLDLHRHFHTFG 283
Query: 301 QLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWGRSPS 350
V V++ K GFV++ + A A++M N + L G+ I+ SWG P+
Sbjct: 284 AGVIEEVRVQRDKGFGFVRYNTHAEAALAIQMGNTQSILCGKPIKCSWGSKPT 336
>gi|449447926|ref|XP_004141717.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
gi|449480481|ref|XP_004155906.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 422
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 147/297 (49%), Gaps = 33/297 (11%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
P R++++G++ + E L F TG V + K++R +++ YGFI + R A
Sbjct: 50 PSTCRSVYVGNVHTQVTEPLLQEVFGSTGLVESCKLVRKEKSS----YGFIHYFDRRSAA 105
Query: 138 RVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ + NG + Q ++NWA + +G++ D + IFVGDL+ +VTD L F
Sbjct: 106 MAILSLNGRHLFG--QPIKVNWA-YASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSV- 161
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ S A+V+ D+ TGR++G+GFV F ++ + A+ ++ G + +R +R AT
Sbjct: 162 FSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGS 221
Query: 258 SASYQNSQVAQ----------------SDDDPNN----TTVFVGNLDSIVTDEHLRELFS 297
+ Q+S V S D P N TTV+VGNL T L F
Sbjct: 222 NDDKQSSDVKSIAELTNGSSEDGKETVSSDAPENNPQYTTVYVGNLAPEATQVDLHRHFH 281
Query: 298 QYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQ--LGGQNIRLSWGRSPS 350
G V V+I K GFV+++ + A A++M N TQ L G+ I+ SWG P+
Sbjct: 282 SLGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGN-TQSFLCGKQIKCSWGSKPT 337
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 272 DPNNT-TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--GFVQFADRSCAEEAL 328
DP+ +V+VGN+ + VT+ L+E+F G + K+ ++ GF+ + DR A A+
Sbjct: 49 DPSTCRSVYVGNVHTQVTEPLLQEVFGSTGLVESCKLVRKEKSSYGFIHYFDRRSAAMAI 108
Query: 329 RMLNGTQLGGQNIRLSWGRSPSNKQ 353
LNG L GQ I+++W + ++
Sbjct: 109 LSLNGRHLFGQPIKVNWAYASGQRE 133
>gi|41055734|ref|NP_956476.1| TIA1 cytotoxic granule-associated RNA binding protein 1 [Danio
rerio]
gi|28277744|gb|AAH45485.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
gi|44890544|gb|AAH66734.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 149/281 (53%), Gaps = 13/281 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E + F+ G + K+I + TG + Y F+EF A L
Sbjct: 9 RTLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDT-TGN-DPYCFVEFYENRHAAAALA 66
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + ++ ++NWAS + +K+D + +FVGDL+ +++ ++ F A +
Sbjct: 67 AMNGRKILG--KDMKVNWASTPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAF-APFGKI 123
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI--------GPATN 253
A+VV D TG++KGYGF+ F ++ + A+ +MNG + R +R P +N
Sbjct: 124 SDARVVKDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSAPKSN 183
Query: 254 KKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 313
+ S+ + + + + P+N TV+ G + S ++D+ +R+ FS +GQ++ +++ K
Sbjct: 184 NEGASSKHLSYEEVLNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVFPEKGY 243
Query: 314 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 354
FV+F A A+ +NGT + G ++ WG+ ++ ++
Sbjct: 244 SFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKETADMRS 284
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 26/229 (11%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D+ T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 4 DEDQPRTLYVGNLSRDVTEALILQVFSQIGP-CKSCKMILD--TTGNDPYCFVEFYENRH 60
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ MNG + M++ A+ + Q D N+ VFVG+L ++
Sbjct: 61 AAAALAAMNGRKILGKDMKVNWASTPSS-----------QKKDTSNHFHVFVGDLSPEIS 109
Query: 289 DEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ +R F+ +G++ ++ K GF+ F ++ AE A++ +NG LGG+ IR
Sbjct: 110 TDDVRAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIR 169
Query: 343 LSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGG 391
+W + K + P N N G YE ++P + ++Y GG
Sbjct: 170 TNWA---TRKPSAPKSN--NEGASSKHLSYEEV-LNQSSPSNCTVYCGG 212
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 28/190 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
+ P Q+ +++GDL + + FA G++ +V+++ TG+ +GYGFI
Sbjct: 84 STPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVKDLATGKSKGYGFI 143
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF----------GAGEKR--------DD 170
FI++ AE +Q NG + G + R NWA+ GA K
Sbjct: 144 SFINKWDAESAIQQMNGQWL--GGRQIRTNWATRKPSAPKSNNEGASSKHLSYEEVLNQS 201
Query: 171 TPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
+P + T++ G +A+ ++D ++++TF S G + I KGY FVRF
Sbjct: 202 SPSNCTVYCGGIASGLSDQLMRQTF-----SPFGQIMEIRVFP--EKGYSFVRFDSHEGA 254
Query: 230 LRAMTEMNGV 239
A+ +NG
Sbjct: 255 AHAIVSVNGT 264
>gi|126273033|ref|XP_001367857.1| PREDICTED: nucleolysin TIAR isoform 1 [Monodelphis domestica]
Length = 388
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 166/349 (47%), Gaps = 41/349 (11%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK--------------- 117
+ GQP RTL++G+L + E + F+ G + K+I +
Sbjct: 2 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVL 58
Query: 118 QTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIF 177
Q + Y F+EF A L NG + E ++NWA+ + +K+D + +F
Sbjct: 59 QHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVF 116
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDL+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M
Sbjct: 117 VGDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMG 175
Query: 238 GVFCSTRPMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDE 290
G + R +R AT K S Q + Q + P N TV+ G + S +TD+
Sbjct: 176 GQWLGGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQ 235
Query: 291 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SP 349
+R+ FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP
Sbjct: 236 LMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESP 295
Query: 350 SNKQ--AQPDPNQWNAGYYGYAQGYEN---YG-YAAAAPQDPSMYYGGY 392
+ Q D +QW ++Q Y N YG Y A Q PS YG Y
Sbjct: 296 DMTKNFQQVDYSQWGQ----WSQVYGNPQQYGQYMANGWQVPS--YGMY 338
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 100 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 159
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 160 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSS 217
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 218 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 270
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 271 HAIVSVNGT 279
>gi|58865762|ref|NP_001012096.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|56268852|gb|AAH87064.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|149036619|gb|EDL91237.1| rCG56007, isoform CRA_c [Rattus norvegicus]
Length = 375
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 151/306 (49%), Gaps = 23/306 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K S
Sbjct: 122 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKST 181
Query: 262 QNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
S Q S P N TV+ G + S +T++ +R+ FS +GQ++ +++ K
Sbjct: 182 YESNTKQLSYDEVVSQSSPGNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYS 241
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ----PDPNQWNAG 364
F++F+ A A+ +NGT + G ++ WG+ +P +Q Q P QW
Sbjct: 242 FIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPPAYGQWGQ- 300
Query: 365 YYGYAQ 370
+YG AQ
Sbjct: 301 WYGNAQ 306
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 21/184 (11%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
A+ MNG + +++ AT + Q D N+ VFVG+L +
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWATTPSS-----------QKKDTSNHFHVFVGDLSPEI 106
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ I
Sbjct: 107 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 166
Query: 342 RLSW 345
R +W
Sbjct: 167 RTNW 170
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 82 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 141
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 142 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSS 199
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY F+RF
Sbjct: 200 PGNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFIRFSSHESAA 252
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 253 HAIVSVNGT 261
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|332029721|gb|EGI69600.1| Nucleolysin TIAR [Acromyrmex echinatior]
Length = 393
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 143/310 (46%), Gaps = 29/310 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E L F+ G V K+IR + Y F+EF + A L
Sbjct: 8 RTLYVGNLDTSVSEDLLCALFSQIGAVKGCKIIREPGN---DPYAFVEFTNHQCAATALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N + E ++NWA+ G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRSFLDKE--MKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA- 259
++V D T ++KGY FV F +SE A+ MNG + +R +R +T K
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRS 181
Query: 260 --------SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 311
S N + + P N TV+ G + +TDE +++ FS +G + +++ K
Sbjct: 182 ERPRHSNNSKPNYEEVYNQSSPTNCTVYCGGFTNGITDELIKKTFSPFGTIQDIRVFKDK 241
Query: 312 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS---------PSNKQAQPDPNQWN 362
F++F + A A+ + T++ G ++ WG+ +N QAQ Q
Sbjct: 242 GYAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQAQ----QVT 297
Query: 363 AGYYGYAQGY 372
AG YA GY
Sbjct: 298 AGAGQYAYGY 307
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 270 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEE 326
++ N T++VGNLD+ V+++ L LFSQ G + KI P FV+F + CA
Sbjct: 2 SEESNPRTLYVGNLDTSVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAAT 61
Query: 327 ALRMLNGTQLGGQNIRLSWGRSPSNK 352
AL +N + ++++W SP N+
Sbjct: 62 ALAAMNKRSFLDKEMKVNWATSPGNQ 87
>gi|45383446|ref|NP_989687.1| nucleolysin TIAR isoform 1 [Gallus gallus]
gi|28883275|gb|AAO49721.1| TIAR [Gallus gallus]
Length = 388
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 166/349 (47%), Gaps = 41/349 (11%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK--------------- 117
+ GQP RTL++G+L + E + F+ G + K+I +
Sbjct: 2 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSSRRVNSVGFSVL 58
Query: 118 QTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIF 177
Q + Y F+EF A L NG + E ++NWA+ + +K+D + +F
Sbjct: 59 QHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVF 116
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDL+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M
Sbjct: 117 VGDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMG 175
Query: 238 GVFCSTRPMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDE 290
G + R +R AT K S Q + Q + P N TV+ G + S +TD+
Sbjct: 176 GQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQ 235
Query: 291 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SP 349
+R+ FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP
Sbjct: 236 LMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESP 295
Query: 350 SNKQ--AQPDPNQWNAGYYGYAQGYEN---YG-YAAAAPQDPSMYYGGY 392
+ Q D +QW ++Q Y N YG Y A Q PS YG Y
Sbjct: 296 DMTKNFQQVDYSQWGQ----WSQVYGNPQQYGQYMANGWQVPS--YGMY 338
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 100 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 159
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 160 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 217
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 218 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 270
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 271 HAIVSVNGT 279
>gi|308475439|ref|XP_003099938.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
gi|308266205|gb|EFP10158.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
Length = 408
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 138/292 (47%), Gaps = 32/292 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + + +L T F G V K+I + G + + F+EF A + LQ
Sbjct: 38 RTLFVGNLDPAITDEFLATLFNQIGAVTKAKIIFDCFQGLNDPFAFVEFSDHNQASQALQ 97
Query: 142 TFNGTPMPNGEQNFRLNWASF----GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
+ NG + E+ R+NWA G K + + +FVGDL+A++ L+E F
Sbjct: 98 SMNGRQLL--EREMRVNWAVEPNQPGDRNKPETSRHFHVFVGDLSAEIDSTKLREAFLP- 154
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ AK++ D T + KGYGFV + + RA+ +MNG + R +R AT K
Sbjct: 155 FGEVSEAKIIRDNATNKAKGYGFVSYPRREDAERAIEQMNGQWLGRRTIRTNWATRKPEE 214
Query: 258 SASYQNSQVAQSDDD------------------------PNNTTVFVGNLDSIVTDEHLR 293
+ + D +NT+V+VGN++S+ DE +R
Sbjct: 215 EGGERRERDRNERGDRPHRGEGRHHHFEKTYDEVFREAAADNTSVYVGNINSLTEDE-IR 273
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 345
F ++GQ+V V+I + FV+F + A A+ +N + GQ +R SW
Sbjct: 274 RGFERFGQIVEVRIFKSQGYAFVKFEQKESAARAIVQMNNQDVSGQMVRCSW 325
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 80/186 (43%), Gaps = 30/186 (16%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T+FVG+L +TD L F TK AK++ D G + FV F D ++ +A+
Sbjct: 39 TLFVGNLDPAITDEFLATLFNQIGAVTK-AKIIFDCFQGLNDPFAFVEFSDHNQASQALQ 97
Query: 235 EMNGVFCSTRPMRIGPAT--------NKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
MNG R MR+ A NK S + VFVG+L +
Sbjct: 98 SMNGRQLLEREMRVNWAVEPNQPGDRNKPETSRHFH---------------VFVGDLSAE 142
Query: 287 VTDEHLRELFSQYGQLVHVKI------PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQN 340
+ LRE F +G++ KI K GFV + R AE A+ +NG LG +
Sbjct: 143 IDSTKLREAFLPFGEVSEAKIIRDNATNKAKGYGFVSYPRREDAERAIEQMNGQWLGRRT 202
Query: 341 IRLSWG 346
IR +W
Sbjct: 203 IRTNWA 208
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 94/219 (42%), Gaps = 50/219 (22%)
Query: 69 AVPPQQQGQPGEIRT-----LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE 123
AV P Q G + T +++GDL +D T L F GEV K+IR+ T + +
Sbjct: 114 AVEPNQPGDRNKPETSRHFHVFVGDLSAEIDSTKLREAFLPFGEVSEAKIIRDNATNKAK 173
Query: 124 GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS---------------------- 161
GYGF+ + R AER ++ NG + G + R NWA+
Sbjct: 174 GYGFVSYPRREDAERAIEQMNGQWL--GRRTIRTNWATRKPEEEGGERRERDRNERGDRP 231
Query: 162 -FGAGEK-----------RDDTPDHT-IFVGDLAADVTDYMLQETFRARYPSTKGAKVVI 208
G G R+ D+T ++VG++ + D + R + ++V
Sbjct: 232 HRGEGRHHHFEKTYDEVFREAAADNTSVYVGNINSLTEDEI-------RRGFERFGQIVE 284
Query: 209 DRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
R+ +++GY FV+F + RA+ +MN S + +R
Sbjct: 285 VRIF-KSQGYAFVKFEQKESAARAIVQMNNQDVSGQMVR 322
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 259 ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG---- 314
A + +A +DP T+FVGNLD +TDE L LF+Q G + KI G
Sbjct: 23 AEREGYHLASGSEDPR--TLFVGNLDPAITDEFLATLFNQIGAVTKAKIIFDCFQGLNDP 80
Query: 315 --FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
FV+F+D + A +AL+ +NG QL + +R++W P+
Sbjct: 81 FAFVEFSDHNQASQALQSMNGRQLLEREMRVNWAVEPN 118
>gi|347967649|ref|XP_312633.5| AGAP002335-PA [Anopheles gambiae str. PEST]
gi|333468363|gb|EAA07505.5| AGAP002335-PA [Anopheles gambiae str. PEST]
Length = 458
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 140/279 (50%), Gaps = 21/279 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L T F+ G V + K+IR I+ + FIE+ + A+ L
Sbjct: 8 KTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIRETS---IDPFAFIEYANHQSAQTALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP-DHTIFVGDLAADVTDYMLQETFRARYPS 200
N E R+NWA+ + + DT H IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRMFLKKE--IRVNWATSAGNQPKTDTSQHHHIFVGDLSPEIDTETLREAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
++V D T +++GY FV F ++E A+ MNG + +R +R +T K A
Sbjct: 122 ISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIAMMNGQWLGSRSIRTNWSTRKP--PAP 179
Query: 261 YQNSQVAQS-----------DDDPNNTTVFVGNLD-SIVTDEHLRELFSQYGQLVHVKIP 308
+NS+ +S + P NTTV+ G + +TDE +++ F+Q+G + ++
Sbjct: 180 RENSKGIKSGKTPGFEEIYNNTSPTNTTVYCGGFPPNAITDELIQKHFAQFGHINDTRVF 239
Query: 309 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
K F++FA + A A+ + +++ G ++ WG+
Sbjct: 240 KDKGYAFIRFASKESAARAIEGTHNSEVQGHPVKCYWGK 278
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 277 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC---GFVQFADRSCAEEALRMLNG 333
T++VGNLD+ VT+E L LFSQ G + KI F+++A+ A+ AL +N
Sbjct: 9 TLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIRETSIDPFAFIEYANHQSAQTALAAMNK 68
Query: 334 TQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYG 367
+ IR++W S N Q + D +Q + + G
Sbjct: 69 RMFLKKEIRVNWATSAGN-QPKTDTSQHHHIFVG 101
>gi|37681959|gb|AAQ97857.1| TIA1 cytotoxic granule-associated RNA binding protein [Danio rerio]
gi|160773363|gb|AAI55270.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 149/281 (53%), Gaps = 13/281 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E + F+ G + K+I + TG + Y F+EF A L
Sbjct: 9 RTLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDT-TGN-DPYCFVEFYENRHAAAALA 66
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + ++ ++NWAS + +K+D + +FVGDL+ +++ ++ F A +
Sbjct: 67 AMNGRKILG--KDMKVNWASTPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAF-APFGKI 123
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI--------GPATN 253
A+VV D TG++KGYGF+ F ++ + A+ +MNG + R +R P +N
Sbjct: 124 SDARVVRDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSAPKSN 183
Query: 254 KKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC 313
+ S+ + + + + P+N TV+ G + S ++D+ +R+ FS +GQ++ +++ K
Sbjct: 184 NEGASSKHLSYEEVLNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVFPEKGY 243
Query: 314 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 354
FV+F A A+ +NGT + G ++ WG+ ++ ++
Sbjct: 244 SFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKETADMRS 284
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 26/229 (11%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D+ T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 4 DEDQPRTLYVGNLSRDVTEALILQVFSQIGP-CKSCKMILD--TTGNDPYCFVEFYENRH 60
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ MNG + M++ A+ + Q D N+ VFVG+L ++
Sbjct: 61 AAAALAAMNGRKILGKDMKVNWASTPSS-----------QKKDTSNHFHVFVGDLSPEIS 109
Query: 289 DEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ +R F+ +G++ ++ K GF+ F ++ AE A++ +NG LGG+ IR
Sbjct: 110 TDDVRAAFAPFGKISDARVVRDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIR 169
Query: 343 LSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGG 391
+W + K + P N N G YE ++P + ++Y GG
Sbjct: 170 TNWA---TRKPSAPKSN--NEGASSKHLSYEEV-LNQSSPSNCTVYCGG 212
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 28/190 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
+ P Q+ +++GDL + + FA G++ +V+R+ TG+ +GYGFI
Sbjct: 84 STPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVRDLATGKSKGYGFI 143
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF----------GAGEKR--------DD 170
FI++ AE +Q NG + G + R NWA+ GA K
Sbjct: 144 SFINKWDAESAIQQMNGQWL--GGRQIRTNWATRKPSAPKSNNEGASSKHLSYEEVLNQS 201
Query: 171 TPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
+P + T++ G +A+ ++D ++++TF S G + I KGY FVRF
Sbjct: 202 SPSNCTVYCGGIASGLSDQLMRQTF-----SPFGQIMEIRVFP--EKGYSFVRFDSHEGA 254
Query: 230 LRAMTEMNGV 239
A+ +NG
Sbjct: 255 AHAIVSVNGT 264
>gi|308321266|gb|ADO27785.1| nucleolysin tiar [Ictalurus furcatus]
Length = 374
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 147/296 (49%), Gaps = 14/296 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F G + K+I + + Y F+EF A L
Sbjct: 8 KTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 65
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 66 AMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAF-APFGKI 122
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT K +
Sbjct: 123 SDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKNT 182
Query: 262 QNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
Q++ Q + P N TV+ G + S ++D +R+ FS +GQ++ +++ K
Sbjct: 183 QDASPKQLRYEDVVNQSSPQNCTVYCGGIQSGLSDHLMRQTFSPFGQIMEIRVFPEKGYS 242
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN--KQAQPDPNQWNAGYYGY 368
F++F+ A A+ +NGT + G ++ WG+ + K QP Q + G +G+
Sbjct: 243 FIRFSSHESAAHAIVSVNGTTIEGHIVKCYWGKESPDMAKTVQPVTEQVDYGQWGH 298
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 35/234 (14%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D++ T++VG+L+ DVT+ ++ + F P K K++ + + Y FV F +
Sbjct: 2 EDESHPKTLYVGNLSRDVTENLILQLFTQIGPC-KSCKMITEHTSNDP--YCFVEFYEHR 58
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
+ A+ MNG + +++ AT +Q D N+ VFVG+L +
Sbjct: 59 DAAAALAAMNGRKILGKEVKVNWATTPS-----------SQKKDTSNHFHVFVGDLSPEI 107
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T + +R F+ +G++ ++ K GFV F ++ AE A+ + G LGG+ I
Sbjct: 108 TTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 167
Query: 342 RLSWGR----SPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGG 391
R +W +P N Q P Q YE+ ++PQ+ ++Y GG
Sbjct: 168 RTNWATRKPPAPKNTQ-DASPKQLR---------YEDV-VNQSSPQNCTVYCGG 210
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 83 TTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFV 142
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF---GAGEKRDDTP------------- 172
F ++ AE + G + G + R NWA+ +D +P
Sbjct: 143 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKNTQDASPKQLRYEDVVNQSS 200
Query: 173 --DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + ++D+++++TF S G + I KGY F+RF
Sbjct: 201 PQNCTVYCGGIQSGLSDHLMRQTF-----SPFGQIMEIRVFP--EKGYSFIRFSSHESAA 253
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 254 HAIVSVNGT 262
>gi|449506038|ref|XP_002188262.2| PREDICTED: nucleolysin TIAR [Taeniopygia guttata]
Length = 453
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 158/323 (48%), Gaps = 25/323 (7%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++G+L + E + F+ G + K+I + + Y F+EF A L
Sbjct: 92 CYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAM 149
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKG 203
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 150 NGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAF-APFGKISD 206
Query: 204 AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQN 263
A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT K S Q
Sbjct: 207 ARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQE 266
Query: 264 SQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFV 316
+ Q + P N TV+ G + S +TD+ +R+ FS +GQ++ +++ K FV
Sbjct: 267 NNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFV 326
Query: 317 QFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPNQWNAGYYGYAQGYE 373
+F+ A A+ +NGT + G ++ WG+ SP + Q D +QW ++Q Y
Sbjct: 327 RFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQ----WSQVYG 382
Query: 374 N---YG-YAAAAPQDPSMYYGGY 392
N YG Y A Q PS YG Y
Sbjct: 383 NPQQYGQYMANGWQVPS--YGMY 403
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 27/188 (14%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIE 129
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 166 TPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVS 225
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDDT 171
F ++ AE + G + G + R NWA+ F +
Sbjct: 226 FYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSP 283
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
+ T++ G +A+ +TD ++++TF S G + I KGY FVRF
Sbjct: 284 KNCTVYCGGIASGLTDQLMRQTF-----SPFGQIMEIRVFP--EKGYSFVRFSTHESAAH 336
Query: 232 AMTEMNGV 239
A+ +NG
Sbjct: 337 AIVSVNGT 344
>gi|116181152|ref|XP_001220425.1| hypothetical protein CHGG_01204 [Chaetomium globosum CBS 148.51]
gi|88185501|gb|EAQ92969.1| hypothetical protein CHGG_01204 [Chaetomium globosum CBS 148.51]
Length = 183
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 99/182 (54%), Gaps = 48/182 (26%)
Query: 82 RTLWIGDLQYWMDETYL-NTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+TLW+G+++ WMDET++ N C GE V VKVIR++ +G G
Sbjct: 41 KTLWMGEMEGWMDETFIKNICRTVLGEDVQVKVIRDRNSGDDRG---------------- 84
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
P+++IFVGDL +V +++L F++R+PS
Sbjct: 85 -------------------------------PEYSIFVGDLGPEVNEFVLVSLFQSRFPS 113
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
K AK++ D +TG+++GYGFVRF DES+Q RA+ EM GV+C RPMRI AT K ++ +
Sbjct: 114 CKSAKIMTDAMTGQSRGYGFVRFSDESDQQRALVEMQGVYCGNRPMRISTATPKTRMAVT 173
Query: 261 YQ 262
+
Sbjct: 174 AK 175
>gi|449453379|ref|XP_004144435.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 422
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 157/318 (49%), Gaps = 43/318 (13%)
Query: 67 GVAVPPQQQGQPG----------EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRN 116
G+ PPQ + P R++++G++ + E L F G V K++R
Sbjct: 28 GLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRK 87
Query: 117 KQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-T 175
+++ YGF+ + R A + + NG + Q ++NWA A +R+DT H
Sbjct: 88 EKSS----YGFVHYFDRRSAALAILSLNGRHLFG--QPIKVNWAY--ASSQREDTSGHFN 139
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
IFVGDL+ +VTD ML F A Y S A+V+ D+ TGR++G+GFV F ++ E A+ +
Sbjct: 140 IFVGDLSPEVTDAMLFACFSA-YSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAIND 198
Query: 236 MNGVFCSTRPMRIGPA------------TNKKTV----SASYQNSQVAQSDDDPNN---- 275
+ G + +R +R A ++ K+V + S ++ + + ++D P N
Sbjct: 199 LTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSSEDGKESVNNDAPENNLQY 258
Query: 276 TTVFVGNLDSIVTDEHLRELFSQYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNG 333
TTV+VGNL V+ L F G V V+I K GFV++ + A A++M N
Sbjct: 259 TTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNT 318
Query: 334 TQ-LGGQNIRLSWGRSPS 350
L G+ I+ SWG P+
Sbjct: 319 RSFLCGRQIKCSWGSKPT 336
>gi|296223620|ref|XP_002757701.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Callithrix
jacchus]
gi|403260488|ref|XP_003922703.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 375
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 153/306 (50%), Gaps = 23/306 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K S
Sbjct: 122 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKST 181
Query: 262 QNSQVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
S Q D P+N TV+ G + S +T++ +R+ FS +GQ++ +++ K
Sbjct: 182 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYS 241
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ---PDP-NQWNAG 364
FV+F A A+ +NGT + G ++ WG+ +P +Q+Q P P QW
Sbjct: 242 FVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQSQIGYPQPYGQWGQ- 300
Query: 365 YYGYAQ 370
+YG AQ
Sbjct: 301 WYGNAQ 306
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 21/184 (11%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
A+ MNG + +++ AT +Q D N+ VFVG+L +
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWATTPS-----------SQKKDTSNHFHVFVGDLSPEI 106
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ I
Sbjct: 107 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 166
Query: 342 RLSW 345
R +W
Sbjct: 167 RTNW 170
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 82 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 141
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 142 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSS 199
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 200 PSNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAA 252
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 253 HAIVSVNGT 261
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|6678349|ref|NP_033409.1| nucleolysin TIAR [Mus musculus]
gi|61557246|ref|NP_001013211.1| nucleolysin TIAR [Rattus norvegicus]
gi|2500589|sp|P70318.1|TIAR_MOUSE RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|1592563|gb|AAC52870.1| RNA binding protein TIAR [Mus musculus]
gi|12848609|dbj|BAB28019.1| unnamed protein product [Mus musculus]
gi|60552455|gb|AAH91409.1| Tia1 cytotoxic granule-associated RNA binding protein-like 1
[Rattus norvegicus]
gi|148685702|gb|EDL17649.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Mus musculus]
gi|149067621|gb|EDM17173.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_a [Rattus norvegicus]
Length = 392
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 33/330 (10%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK--------------- 117
+ GQP RTL++G+L + E + F+ G + K+I +
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVL 59
Query: 118 QTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIF 177
Q + Y F+EF A L NG + E ++NWA+ + +K+D + +F
Sbjct: 60 QHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVF 117
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDL+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M
Sbjct: 118 VGDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMG 176
Query: 238 GVFCSTRPMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDE 290
G + R +R AT K S Q + Q + P N TV+ G + S +TD+
Sbjct: 177 GQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQ 236
Query: 291 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SP 349
+R+ FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP
Sbjct: 237 LMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESP 296
Query: 350 SNKQA--QPDPNQWN--AGYYGYAQGYENY 375
+ Q D +QW + YG Q Y Y
Sbjct: 297 DMTKNFQQVDYSQWGQWSQVYGNPQQYGQY 326
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 101 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 160
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 161 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSS 218
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF S G + I KGY FVRF
Sbjct: 219 PKNCTVYCGGIASGLTDQLMRQTF-----SPFGQIMEIRVFP--EKGYSFVRFSTHESAA 271
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 272 HAIVSVNGT 280
>gi|226500040|ref|NP_001150056.1| LOC100283683 [Zea mays]
gi|195636346|gb|ACG37641.1| nucleolysin TIAR [Zea mays]
Length = 421
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 147/291 (50%), Gaps = 30/291 (10%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + +T L F G V K+IR +++ +GFI++ R A +
Sbjct: 74 CRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSS----FGFIDYYDRRYAALAI 129
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
+ NG + Q ++NWA R+DT H IFVGDL +VTD L F Y
Sbjct: 130 LSLNGRQLYG--QPIKVNWAY--TSTPREDTSGHFNIFVGDLCPEVTDATLFAFFSG-YS 184
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN------ 253
+ A+V+ D+ TGR++G+GFV F ++ + A+ ++NG + R +R AT
Sbjct: 185 TCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCNWATKGANAGE 244
Query: 254 -----KKTVSASYQNSQVAQ---SDDDPNN----TTVFVGNL--DSIVTDEHLRELFSQY 299
V S +S+ + +DD P N TTV+VGNL ++ + D HL
Sbjct: 245 EKQILDTKVDLSNGSSESGKENPNDDGPENNPQFTTVYVGNLPHEATMNDVHLFFHSLGA 304
Query: 300 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
G + V++ K GFV+++ A A++M NG +GG+ I+ SWG P+
Sbjct: 305 GSIEEVRVTRDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQIKCSWGSKPT 355
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 23/189 (12%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VTD +LQE F++ P +G K++ +GF+ + D
Sbjct: 70 DSSTCRSVYVGNIHLQVTDTVLQEVFQSIGP-VEGCKLI----RKEKSSFGFIDYYDRRY 124
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ +NG +P+++ A +D + +FVG+L VT
Sbjct: 125 AALAILSLNGRQLYGQPIKVNWAYTS------------TPREDTSGHFNIFVGDLCPEVT 172
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ ++ G FV F ++ A+ A+ LNG LG + IR
Sbjct: 173 DATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIR 232
Query: 343 LSWGRSPSN 351
+W +N
Sbjct: 233 CNWATKGAN 241
>gi|149391493|gb|ABR25764.1| nucleic acid binding protein [Oryza sativa Indica Group]
Length = 151
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 93/137 (67%), Gaps = 6/137 (4%)
Query: 267 AQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEE 326
SD D N TV+VG LD V+++ LR+ F++YG + VKIP GK+CGFVQF R+ AEE
Sbjct: 14 GHSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEE 73
Query: 327 ALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAGYYGYAQGYENYGYAAAAPQDP 385
AL+ LNG+ +G Q +RLSWGRSPS+KQ++ D ++ N YYG Y YGYA+ P P
Sbjct: 74 ALQGLNGSVIGKQAVRLSWGRSPSHKQSRADSGSRRNNMYYG-TPFYGGYGYASPVPH-P 131
Query: 386 SMY---YGGYPGYGNYQ 399
+MY YG YP YG+ Q
Sbjct: 132 NMYAAAYGAYPVYGSQQ 148
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RT+++G L + E L FA G+V +VK+ KQ GF++F+SR AE LQ
Sbjct: 23 RTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQC------GFVQFVSRTDAEEALQ 76
Query: 142 TFNGTPMPNGEQNFRLNWA 160
NG+ + G+Q RL+W
Sbjct: 77 GLNGSVI--GKQAVRLSWG 93
>gi|427789733|gb|JAA60318.1| Putative rox8 [Rhipicephalus pulchellus]
Length = 406
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 139/298 (46%), Gaps = 20/298 (6%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ QG + RTL++G+L + E L F G+V K+I + Y F+EF
Sbjct: 4 KDQGNDCQPRTLYVGNLDTAVTEELLVAVFGQMGQVKGCKIIHEPGN---DPYCFVEFSD 60
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQ 191
A L N E ++NWA+ G K D + H IFVGDL+ ++ L+
Sbjct: 61 HQSAASALLAMNKRLCFGKE--MKVNWATSPGNTPKLDTSKHHHIFVGDLSPEIETTQLR 118
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
+ F A + +VV D T ++KGYGFV F +++ A+ MNG + +R +R A
Sbjct: 119 DAF-APFGDISDCRVVRDPQTLKSKGYGFVSFVKKADAENAIGTMNGQWLGSRAIRTNWA 177
Query: 252 TNKKTVSASYQNSQVAQS-----------DDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 300
T K + + + S P N TV+ G + +++E +++ FS YG
Sbjct: 178 TRKPPANRTQAEVDITTSTKPLTFDEVYNQSSPTNCTVYCGGITQGLSEELMQKTFSSYG 237
Query: 301 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS--NKQAQP 356
+ +++ K F++F + A A+ + + + GQ ++ SWG+ + N Q QP
Sbjct: 238 AIQEIRVFKDKGYAFIRFGTKEAATHAIVATHNSDVNGQTVKCSWGKEATDPNNQQQP 295
>gi|47086779|ref|NP_997793.1| cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
gi|28279551|gb|AAH45368.1| Cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
Length = 386
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 144/277 (51%), Gaps = 12/277 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F G + K+I + T + Y F+EF A L
Sbjct: 8 KTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVD--TAGNDPYCFVEFFEHRHAAASLA 65
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 66 AMNGRKIMGKE--VKVNWATSPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAF-APFGRI 122
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV-SAS 260
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K A+
Sbjct: 123 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKAT 182
Query: 261 YQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
Y+ + S D+ P+N TV+ G + + +T++ +R+ FS +GQ++ V++ K
Sbjct: 183 YETNTKHLSFDEVVNQSSPSNCTVYCGGVTTGLTEQLMRQTFSPFGQIMEVRVFPDKGYS 242
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 351
FV+F A A+ +NGT L G ++ WG+ ++
Sbjct: 243 FVRFNSHESAAHAIVSVNGTSLEGHIVKCYWGKETTD 279
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 21/198 (10%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
DD T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 3 DDEQPKTLYVGNLSRDVTEALIMQLFGQIGPC-KSCKMIVD--TAGNDPYCFVEFFEHRH 59
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
++ MNG + +++ AT S +Q D N+ VFVG+L +T
Sbjct: 60 AAASLAAMNGRKIMGKEVKVNWAT-----------SPSSQKKDTSNHFHVFVGDLSPEIT 108
Query: 289 DEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ +R F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ IR
Sbjct: 109 TDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIR 168
Query: 343 LSWG-RSPSNKQAQPDPN 359
+W R P +A + N
Sbjct: 169 TNWATRKPPAPKATYETN 186
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 27/186 (14%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+ F
Sbjct: 85 PSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSF 144
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDDTP 172
++ AE +Q G + G + R NWA SF +
Sbjct: 145 FNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKATYETNTKHLSFDEVVNQSSPS 202
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ T++ G + +T+ ++++TF + + +V D KGY FVRF A
Sbjct: 203 NCTVYCGGVTTGLTEQLMRQTF-SPFGQIMEVRVFPD------KGYSFVRFNSHESAAHA 255
Query: 233 MTEMNG 238
+ +NG
Sbjct: 256 IVSVNG 261
>gi|195388164|ref|XP_002052753.1| GJ17734 [Drosophila virilis]
gi|194149210|gb|EDW64908.1| GJ17734 [Drosophila virilis]
Length = 345
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 106/178 (59%), Gaps = 12/178 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE V+++RNK TG+ GY F+ FIS A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGA---GEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG P+P N FRLN AS G +R+ +++VGDL++DV DY L + F ++
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE----FSVWVGDLSSDVDDYSLYKVFSSK 123
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
Y S K AKV++D L G +KGYGFVRFG E EQ A+ +MNG V T+P++I A K
Sbjct: 124 YTSIKTAKVILDSL-GFSKGYGFVRFGIEDEQKSALYDMNGYVGLGTKPIKICNAVPK 180
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 21/178 (11%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L + +T+ + FR +++ ++ TG GY FV F + L AM +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 236 MNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNT---TVFVGNLDSIVTDEHL 292
+NG +P+ P TN ++ + + S P N +V+VG+L S V D L
Sbjct: 68 LNG-----KPI---PGTNPIV---RFRLNSASNSYKLPGNEREFSVWVGDLSSDVDDYSL 116
Query: 293 RELF-SQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRL 343
++F S+Y + K+ K GFV+F + AL +NG LG + I++
Sbjct: 117 YKVFSSKYTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKSALYDMNGYVGLGTKPIKI 174
>gi|291404907|ref|XP_002718787.1| PREDICTED: TIA-1 related protein-like [Oryctolagus cuniculus]
Length = 450
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 149/303 (49%), Gaps = 17/303 (5%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F+ G + K+I + + Y F+EF A L N
Sbjct: 87 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMN 144
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
G + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A + A
Sbjct: 145 GRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAF-APFGKISDA 201
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNS 264
+VV D TG++KGYGFV F ++ + A+ M G + R +R AT K S Q +
Sbjct: 202 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQEN 261
Query: 265 QVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 317
Q + P N TV+ G + S +TD+ +R+ FS +GQ++ +++ K FV+
Sbjct: 262 NTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVR 321
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPNQWN--AGYYGYAQGY 372
F+ A A+ +NGT + G ++ WG+ SP + Q D +QW + YG Q Y
Sbjct: 322 FSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQY 381
Query: 373 ENY 375
Y
Sbjct: 382 GQY 384
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 159 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 218
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 219 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 276
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF S G + I KGY FVRF
Sbjct: 277 PKNCTVYCGGIASGLTDQLMRQTF-----SPFGQIMEIRVFP--EKGYSFVRFSTHESAA 329
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 330 HAIVSVNGT 338
>gi|302496843|ref|XP_003010422.1| hypothetical protein ARB_03123 [Arthroderma benhamiae CBS 112371]
gi|291173965|gb|EFE29782.1| hypothetical protein ARB_03123 [Arthroderma benhamiae CBS 112371]
Length = 541
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 141/327 (43%), Gaps = 64/327 (19%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE------------------ 123
R L++G L + E L F TG V +VK+I +K Q
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNVSQRLLLLYLSDLYLFFVLYVYL 161
Query: 124 -----------------GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGE 166
YGFIE+ AER +QT NG + E R+NWA
Sbjct: 162 NLITSALLLVIFQSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNTA 219
Query: 167 KRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGD 225
++DT H IFVGDL+ +V D +L + F A S A+V+ D TGR++GYGFV F +
Sbjct: 220 SKEDTSSHFHIFVGDLSNEVNDEVLLQAFSA-CGSVSEARVMWDMKTGRSRGYGFVAFRE 278
Query: 226 ESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVA------------------ 267
++ +A++ M+G + +R +R A K S S Q + A
Sbjct: 279 RADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHG 338
Query: 268 -QSDD-----DPN-NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFAD 320
QS D P TT +VGNL T L LF +G +V + A + FV+
Sbjct: 339 VQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQADRGFAFVKMDT 398
Query: 321 RSCAEEALRMLNGTQLGGQNIRLSWGR 347
A A+ LNG + G+ ++ SWG+
Sbjct: 399 HENAAMAICQLNGYNVNGRPLKCSWGK 425
>gi|194766221|ref|XP_001965223.1| GF24033 [Drosophila ananassae]
gi|190617833|gb|EDV33357.1| GF24033 [Drosophila ananassae]
Length = 339
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 106/178 (59%), Gaps = 12/178 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE V+++RNK TG+ GY F+ FIS A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGA---GEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG P+P N FRLN AS G +R+ +++VGDL++DV DY L + F ++
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE----FSVWVGDLSSDVDDYQLYKVFSSK 123
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
+ S K AKV++D L G +KGYGFVRFG E EQ AM +MNG + TRP++I A K
Sbjct: 124 FTSIKTAKVILDSL-GFSKGYGFVRFGIEDEQKTAMYDMNGYIGLGTRPIKICNAVPK 180
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 21/178 (11%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L + +T+ + FR +++ ++ TG GY FV F + L AM +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 236 MNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNT---TVFVGNLDSIVTDEHL 292
+NG +P+ P TN ++ + + S P N +V+VG+L S V D L
Sbjct: 68 LNG-----KPI---PGTNPIV---RFRLNSASNSYKLPGNEREFSVWVGDLSSDVDDYQL 116
Query: 293 RELFS------QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRL 343
++FS + +++ + K GFV+F + A+ +NG LG + I++
Sbjct: 117 YKVFSSKFTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKTAMYDMNGYIGLGTRPIKI 174
>gi|332376136|gb|AEE63208.1| unknown [Dendroctonus ponderosae]
Length = 371
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 141/291 (48%), Gaps = 17/291 (5%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F+ G V K+IR + Y F+EF + A L
Sbjct: 8 KTLYVGNLDISVQEDLLCALFSQIGPVKGCKIIREPGN---DPYAFVEFTNHQSASTALI 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETFRARYPS 200
N + E ++NWA+ + + DT +H IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRVFLDKE--MKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETDTLREAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----KT 256
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K +
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTRKPPPPRA 181
Query: 257 VSASYQNSQVAQSD----DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 312
+ Q+ + P NTTV+ G S +TD+ + + FS++G + +++ K
Sbjct: 182 EKPNQSKKQITFDEVYNQTSPTNTTVYCGGFASGLTDDLVTKTFSRFGAIQDIRVFKDKG 241
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNA 363
F++F + A A+ ++ T++ G ++ WG+ N PD N +A
Sbjct: 242 YAFIKFVSKESATHAIENIHNTEINGHTVKCFWGK--ENGGLGPDVNALSA 290
>gi|449517663|ref|XP_004165864.1| PREDICTED: nucleolysin TIAR-like, partial [Cucumis sativus]
Length = 394
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 150/293 (51%), Gaps = 33/293 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + E L F G V K++R +++ YGF+ + R A +
Sbjct: 25 RSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSS----YGFVHYFDRRSAALAIL 80
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
+ NG + Q ++NWA A +R+DT H IFVGDL+ +VTD ML F A Y S
Sbjct: 81 SLNGRHLFG--QPIKVNWAY--ASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSA-YSS 135
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA--------- 251
A+V+ D+ TGR++G+GFV F ++ E A+ ++ G + +R +R A
Sbjct: 136 CSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNED 195
Query: 252 ---TNKKTV----SASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQYG 300
++ K+V + S ++ + + ++D P N TTV+VGNL V+ L F G
Sbjct: 196 KQGSDTKSVVELSNGSSEDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLG 255
Query: 301 QLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQ-LGGQNIRLSWGRSPS 350
V V+I K GFV++ + A A++M N L G+ I+ SWG P+
Sbjct: 256 AGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPT 308
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 23/183 (12%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VT+ +LQE F + P +G K+V YGFV + D
Sbjct: 20 DASTCRSVYVGNIHIQVTEPLLQEVFGSIGP-VEGCKLV----RKEKSSYGFVHYFDRRS 74
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ +NG +P+++ A Y +S Q +D + +FVG+L VT
Sbjct: 75 AALAILSLNGRHLFGQPIKVNWA---------YASS---QREDTSGHFNIFVGDLSPEVT 122
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ ++ GFV F ++ A+ A+ L G LG + IR
Sbjct: 123 DAMLFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGSRQIR 182
Query: 343 LSW 345
+W
Sbjct: 183 CNW 185
>gi|432906488|ref|XP_004077556.1| PREDICTED: nucleolysin TIAR-like [Oryzias latipes]
Length = 382
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 142/297 (47%), Gaps = 18/297 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E + F G + K+I + + Y F+EF A L
Sbjct: 8 RTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSN--DPYCFVEFFEHRDAAAALA 65
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL D++ ++ F +
Sbjct: 66 AMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLNPDISTEDVRAAFTP-FGKI 122
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT K S
Sbjct: 123 SDARVVKDLTTGKSKGYGFVSFYNKLDAENAIVHMAGQWLGGRQIRTNWATRKPPAPKSL 182
Query: 262 QNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
Q+S Q + P N TV+ G + S +++ +R+ FS +GQ++ +++ K
Sbjct: 183 QDSVSKQLRFEEVVTQSSPQNCTVYCGGIQSELSEHLMRQTFSPFGQIMEIRVFPEKGYS 242
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP------NQWNAGY 365
F++F+ A A+ +NGT + G ++ WG+ ++ P QWN Y
Sbjct: 243 FIRFSSHDSAAHAIVSVNGTSIEGHAVKCYWGKESTDMAKNPQQFEYSQWGQWNQVY 299
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 20/183 (10%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D++ T++VG+L+ DVT+ ++ + F P K K++ + + Y FV F + +
Sbjct: 3 DESHPRTLYVGNLSRDVTEILILQLFTQIGP-CKSCKMITEHTSNDP--YCFVEFFEHRD 59
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ MNG + +++ AT +Q D N+ VFVG+L+ ++
Sbjct: 60 AAAALAAMNGRKILGKEVKVNWATTPS-----------SQKKDTSNHFHVFVGDLNPDIS 108
Query: 289 DEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
E +R F+ +G++ ++ K GFV F ++ AE A+ + G LGG+ IR
Sbjct: 109 TEDVRAAFTPFGKISDARVVKDLTTGKSKGYGFVSFYNKLDAENAIVHMAGQWLGGRQIR 168
Query: 343 LSW 345
+W
Sbjct: 169 TNW 171
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + F G++ +V+++ TG+ +GYGF+
Sbjct: 83 TTPSSQKKDTSNHFHVFVGDLNPDISTEDVRAAFTPFGKISDARVVKDLTTGKSKGYGFV 142
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 143 SFYNKLDAENAIVHMAGQWL--GGRQIRTNWATRKPPAPKSLQDSVSKQLRFEEVVTQSS 200
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + ++++++++++TF P + +++ KGY F+RF
Sbjct: 201 PQNCTVYCGGIQSELSEHLMRQTFS---PFGQ----IMEIRVFPEKGYSFIRFSSHDSAA 253
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 254 HAIVSVNGT 262
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 270 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG----FVQFADRSCAE 325
DD+ + T++VGNL VT+ + +LF+Q G K+ FV+F + A
Sbjct: 2 DDESHPRTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAA 61
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 62 AALAAMNGRKILGKEVKVNWATTPSSQK 89
>gi|110756942|ref|XP_395357.3| PREDICTED: nucleolysin TIAR [Apis mellifera]
gi|340713958|ref|XP_003395500.1| PREDICTED: nucleolysin TIAR-like [Bombus terrestris]
gi|350421173|ref|XP_003492759.1| PREDICTED: nucleolysin TIAR-like [Bombus impatiens]
gi|380025693|ref|XP_003696603.1| PREDICTED: nucleolysin TIAR-like [Apis florea]
Length = 392
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 142/310 (45%), Gaps = 29/310 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E L F+ G V K+IR + Y F+EF + A L
Sbjct: 8 RTLYVGNLDTSVSEELLCALFSQIGAVKGCKIIREPGN---DPYAFVEFTNHQCAATALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N N E ++NWA+ G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRSFLNKE--MKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA- 259
++V D T ++KGY FV F +SE A+ MNG + +R +R +T K
Sbjct: 122 ISNCRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAAMNGQWLGSRSIRTNWSTRKPPPPRS 181
Query: 260 --------SYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGK 311
S N + + P N TV+ G + +TD+ + + FS +G + +++ K
Sbjct: 182 ERPRHSNNSKPNYEEVYNQSSPTNCTVYCGGFTNGITDDLITKTFSPFGTIQDIRVFKDK 241
Query: 312 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS---------PSNKQAQPDPNQWN 362
F++F + A A+ + T++ G ++ WG+ +N QAQ Q
Sbjct: 242 GYAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQAQ----QVT 297
Query: 363 AGYYGYAQGY 372
AG YA GY
Sbjct: 298 AGAGQYAYGY 307
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 270 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEE 326
++ N T++VGNLD+ V++E L LFSQ G + KI P FV+F + CA
Sbjct: 2 SEESNPRTLYVGNLDTSVSEELLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAAT 61
Query: 327 ALRMLNGTQLGGQNIRLSWGRSPSNK 352
AL +N + ++++W SP N+
Sbjct: 62 ALAAMNKRSFLNKEMKVNWATSPGNQ 87
>gi|147902038|ref|NP_001087561.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
laevis]
gi|51261513|gb|AAH80105.1| MGC84540 protein [Xenopus laevis]
Length = 389
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 169/372 (45%), Gaps = 58/372 (15%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E + F+ G + K+I + T + Y F+EF A L
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMD--TAGNDPYCFVEFFEHRHAAASLA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRD----------DTPDH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AINGRKIMGKE--VKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
AT K S S Q + P+N TV+ G + S +T++ +R+ FS +GQ++
Sbjct: 182 ATRKPPAPKSTYESNAKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQPD 357
V++ K FV+F+ A A+ +NGT + G ++ WG+ +P + ++P
Sbjct: 242 EVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETPDMLNPVQQVSEPS 301
Query: 358 -------------------------PNQWNAGYYG-YAQGYENYGYAAAAPQDPSMYYGG 391
PN W YG Y Q + GY + P + + G
Sbjct: 302 QISFPPPYGQWGQWYGGAQQISQYVPNGWQMPAYGVYGQAWNQQGY-SQTPSSAATWVG- 359
Query: 392 YPGYGNYQQPQQ 403
P YG QP Q
Sbjct: 360 -PNYGVQPQPGQ 370
>gi|392571669|gb|EIW64841.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 437
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 141/306 (46%), Gaps = 46/306 (15%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E++ AE LQ
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYMDMRAAETALQ 76
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D + + +FVGDL+ +V D +L + F A + +
Sbjct: 77 TLNGRKIFDTE--IRVNWAYQGQQNKEDTSNHYHVFVGDLSPEVNDEVLGKAFSA-FGTL 133
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A K S
Sbjct: 134 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSPGG 193
Query: 262 ---------------------QNSQVAQSDDDPN-------------------NTTVFVG 281
NS P NTTV+VG
Sbjct: 194 PGGPGGPGGPGGPGGPGGPPRSNSMGGGGAPAPMNFTGGPLSYEGVVTQTPAYNTTVYVG 253
Query: 282 NLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
NL T L LF G L +++ + + FV+ A A+ L G + G+ I
Sbjct: 254 NLVPYATQADLIPLFQSIGYLSEIRMQSDRGFAFVKLDTHEHAAMAIVQLQGQLVHGRPI 313
Query: 342 RLSWGR 347
+ SWG+
Sbjct: 314 KCSWGK 319
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 269 SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADR 321
S + P ++VGNL VT+ L E+F+ G + HVKI G GFV++ D
Sbjct: 9 SAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDM 68
Query: 322 SCAEEALRMLNGTQLGGQNIRLSW 345
AE AL+ LNG ++ IR++W
Sbjct: 69 RAAETALQTLNGRKIFDTEIRVNW 92
>gi|348522243|ref|XP_003448635.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Oreochromis niloticus]
Length = 387
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 162/333 (48%), Gaps = 20/333 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E + F G + K+I + T + Y F+EF A L
Sbjct: 8 RTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVD--TAGNDPYCFVEFYDHRHAAASLA 65
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ +K+D + +FVGDL+ ++T ++ F +
Sbjct: 66 AMNGRKIMGKE--VKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAF-GPFGRI 122
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV-SAS 260
A+VV D TG++KGYGFV F ++ + A+ M G + R +R AT K +
Sbjct: 123 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKTT 182
Query: 261 YQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
++N+ S D+ P+N TV+ G + + +T++ +R+ FS +GQ++ V++ K
Sbjct: 183 HENNSKHLSFDEVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEVRVFPDKGYS 242
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP----SNKQAQPDPNQWNAGYYGYAQ 370
FV+F A A+ +NG+ + G ++ WG+ ++ Q P P Q G + AQ
Sbjct: 243 FVRFNSHESAAHAIVSVNGSSIEGHIVKCYWGKETPDMMNSMQQMPVPQQNKMG-FAAAQ 301
Query: 371 GYENYG-YAAAAPQDPSMYYGGY--PGYGNYQQ 400
Y +G + PQ G+ P YG Y Q
Sbjct: 302 PYGQWGQWYGNGPQIGQYVPNGWQVPTYGVYGQ 334
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 21/184 (11%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
DD P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F D
Sbjct: 3 EDDQP-RTLYVGNLSRDVTEPLILQVFTQIGP-CKSCKMIVD--TAGNDPYCFVEFYDHR 58
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
++ MNG + +++ AT + +Q D N+ VFVG+L +
Sbjct: 59 HAAASLAAMNGRKIMGKEVKVNWAT-----------TPTSQKKDTSNHFHVFVGDLSPEI 107
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T E ++ F +G++ ++ K GFV F ++ AE A++ + G LGG+ I
Sbjct: 108 TTEDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQI 167
Query: 342 RLSW 345
R +W
Sbjct: 168 RTNW 171
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 79/187 (42%), Gaps = 27/187 (14%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIE 129
P Q+ +++GDL + + F G + +V+++ TG+ +GYGF+
Sbjct: 84 TPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFGPFGRISDARVVKDMATGKSKGYGFVS 143
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDDT 171
F ++ AE +Q G + G + R NWA SF +
Sbjct: 144 FFNKWDAENAIQHMGGQWL--GGRQIRTNWATRKPPAPKTTHENNSKHLSFDEVVNQSSP 201
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
+ T++ G ++ +T+ ++++TF + + +V D KGY FVRF
Sbjct: 202 SNCTVYCGGVSTGLTEQLMRQTF-SPFGQIMEVRVFPD------KGYSFVRFNSHESAAH 254
Query: 232 AMTEMNG 238
A+ +NG
Sbjct: 255 AIVSVNG 261
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 270 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCA 324
DD P T++VGNL VT+ + ++F+Q G K+ AG C FV+F D A
Sbjct: 4 DDQPR--TLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYC-FVEFYDHRHA 60
Query: 325 EEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
+L +NG ++ G+ ++++W +P++++
Sbjct: 61 AASLAAMNGRKIMGKEVKVNWATTPTSQK 89
>gi|67465872|ref|XP_649094.1| RNA-binding protein TIA-1 [Entamoeba histolytica HM-1:IMSS]
gi|56465456|gb|EAL43711.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705857|gb|EMD45818.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica KU27]
Length = 306
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 144/272 (52%), Gaps = 17/272 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+++ + + +DE L F+ G VV+ K++R+K +G GYGF+EF+ A
Sbjct: 43 KSVHVSGIHESVDEILLGRIFSIVGHVVSCKIMRDK-SGVHAGYGFVEFVDSTTARFAKD 101
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
+G + E ++NW S+ A ++++ ++ IFVG L +V D +L +TF+ ++
Sbjct: 102 NMDGRVVYGRE--LKVNW-SYTA--QQENQGNYKIFVGGLQPEVNDDLLYKTFQ-KFGRV 155
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+V+ TG++KGYGFV F + + AM MNG R +++ N T + +
Sbjct: 156 TDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIKV----NWVTSNIAS 211
Query: 262 QNSQVAQSDDDPNN------TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGF 315
+ Q +S D+ NN TV++GN+ V + L++L ++YG + V++ K F
Sbjct: 212 KTEQPKRSYDEINNETSSQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAF 271
Query: 316 VQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
++F+ A A+ M NG + G +R SWGR
Sbjct: 272 IKFSKHESATSAILMCNGKIINGSTLRCSWGR 303
>gi|77695912|ref|NP_001029097.1| nucleolysin TIAR isoform 2 [Homo sapiens]
gi|73998714|ref|XP_852319.1| PREDICTED: nucleolysin TIAR isoform 2 [Canis lupus familiaris]
gi|114633030|ref|XP_001154768.1| PREDICTED: nucleolysin TIAR isoform 6 [Pan troglodytes]
gi|311271911|ref|XP_003133244.1| PREDICTED: nucleolysin TIAR isoform 2 [Sus scrofa]
gi|338716472|ref|XP_003363459.1| PREDICTED: nucleolysin TIAR [Equus caballus]
gi|390473251|ref|XP_003734574.1| PREDICTED: nucleolysin TIAR isoform 2 [Callithrix jacchus]
gi|395827973|ref|XP_003787162.1| PREDICTED: nucleolysin TIAR isoform 1 [Otolemur garnettii]
gi|397510639|ref|XP_003825700.1| PREDICTED: nucleolysin TIAR isoform 2 [Pan paniscus]
gi|402881652|ref|XP_003904380.1| PREDICTED: nucleolysin TIAR isoform 2 [Papio anubis]
gi|426253186|ref|XP_004020281.1| PREDICTED: nucleolysin TIAR isoform 2 [Ovis aries]
gi|426366374|ref|XP_004050233.1| PREDICTED: nucleolysin TIAR isoform 2 [Gorilla gorilla gorilla]
gi|158255404|dbj|BAF83673.1| unnamed protein product [Homo sapiens]
gi|380783709|gb|AFE63730.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|383408327|gb|AFH27377.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|384942768|gb|AFI34989.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|410218476|gb|JAA06457.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257384|gb|JAA16659.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296998|gb|JAA27099.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 392
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 33/330 (10%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK--------------- 117
+ GQP RTL++G+L + E + F+ G + K+I +
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVL 59
Query: 118 QTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIF 177
Q + Y F+EF A L NG + E ++NWA+ + +K+D + +F
Sbjct: 60 QHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVF 117
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDL+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M
Sbjct: 118 VGDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMG 176
Query: 238 GVFCSTRPMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDE 290
G + R +R AT K S Q + Q + P N TV+ G + S +TD+
Sbjct: 177 GQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQ 236
Query: 291 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SP 349
+R+ FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP
Sbjct: 237 LMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESP 296
Query: 350 SNKQA--QPDPNQWN--AGYYGYAQGYENY 375
+ Q D +QW + YG Q Y Y
Sbjct: 297 DMTKNFQQVDYSQWGQWSQVYGNPQQYGQY 326
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 101 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 160
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 161 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 218
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF S G + I KGY FVRF
Sbjct: 219 PKNCTVYCGGIASGLTDQLMRQTF-----SPFGQIMEIRVFP--EKGYSFVRFSTHESAA 271
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 272 HAIVSVNGT 280
>gi|344283909|ref|XP_003413713.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Loxodonta
africana]
Length = 375
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 152/306 (49%), Gaps = 23/306 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K S
Sbjct: 122 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKST 181
Query: 262 QNSQVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
S Q D P+N TV+ G + S +T++ +R+ FS +GQ++ +++ K
Sbjct: 182 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYS 241
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ---PDP-NQWNAG 364
FV+F A A+ +NGT + G ++ WG+ +P +Q Q P P QW
Sbjct: 242 FVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPQPYGQWGQ- 300
Query: 365 YYGYAQ 370
+YG AQ
Sbjct: 301 WYGNAQ 306
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 20/183 (10%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
+D T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFYEHRH 58
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ MNG + +++ AT + Q D N+ VFVG+L +T
Sbjct: 59 AAAALAAMNGRKIMGKEVKVNWATTPSS-----------QKKDTSNHFHVFVGDLSPEIT 107
Query: 289 DEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ IR
Sbjct: 108 TEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIR 167
Query: 343 LSW 345
+W
Sbjct: 168 TNW 170
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 82 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 141
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 142 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSS 199
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 200 PSNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAA 252
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 253 HAIVSVNGT 261
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|297687491|ref|XP_002821246.1| PREDICTED: nucleolysin TIAR isoform 1 [Pongo abelii]
gi|410976205|ref|XP_003994513.1| PREDICTED: nucleolysin TIAR isoform 1 [Felis catus]
Length = 376
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 156/316 (49%), Gaps = 21/316 (6%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ GQP RTL++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYE 57
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQ 191
A L NG + E ++NWA+ + +K+ +H +FVGDL+ ++T ++
Sbjct: 58 HRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKILPVNHFHVFVGDLSPEITTEDIK 115
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +R A
Sbjct: 116 SAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 174
Query: 252 TNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 304
T K S Q + Q + P N TV+ G + S +TD+ +R+ FS +GQ++
Sbjct: 175 TRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIME 234
Query: 305 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPNQW 361
+++ K FV+F+ A A+ +NGT + G ++ WG+ SP + Q D +QW
Sbjct: 235 IRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQW 294
Query: 362 N--AGYYGYAQGYENY 375
+ YG Q Y Y
Sbjct: 295 GQWSQVYGNPQQYGQY 310
>gi|351710501|gb|EHB13420.1| Nucleolysin TIAR [Heterocephalus glaber]
Length = 392
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 168/360 (46%), Gaps = 43/360 (11%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK--------------- 117
+ GQP RTL++G+L + E + F+ G + K+I +
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVL 59
Query: 118 QTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIF 177
Q + Y F+EF A L NG + E ++NWA+ + +K+D + +F
Sbjct: 60 QHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVF 117
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDL+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M
Sbjct: 118 VGDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMG 176
Query: 238 GVFCSTRPMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDE 290
G + R +R AT K S Q + Q + P N TV+ G + S +TD+
Sbjct: 177 GQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQ 236
Query: 291 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SP 349
+R+ FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP
Sbjct: 237 LMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESP 296
Query: 350 SNKQA--QPDPNQWNAGYYGYAQGY-ENYG-YAAAAPQDPSMYYGGYPGYGNYQQPQQPQ 405
+ Q D +QW G +G G + YG Y A Q P YG Y QP Q
Sbjct: 297 DMTKNFQQVDYSQW--GQWGQVYGNPQQYGQYMANGWQ--------VPPYGVYGQPWNQQ 346
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 101 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 160
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 161 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 218
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF S G + I KGY FVRF
Sbjct: 219 PKNCTVYCGGIASGLTDQLMRQTF-----SPFGQIMEIRVFP--EKGYSFVRFSTHESAA 271
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 272 HAIVSVNGT 280
>gi|432884715|ref|XP_004074554.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 143/277 (51%), Gaps = 12/277 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F G + K+I + T + Y F+EF A +
Sbjct: 7 KTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKILGKE--VKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAF-APFGKI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK---KTVS 258
+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K KT +
Sbjct: 122 SDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTN 181
Query: 259 ASYQNSQVAQSD----DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
S + Q++ + P+N TV+ G + + +T++ +R+ FS +GQ++ +++ K
Sbjct: 182 ESSSSKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPEKGYS 241
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 351
FV+F A A+ +NGT + G ++ WG+ ++
Sbjct: 242 FVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTD 278
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 21/191 (10%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
DD T++VG+L+ DVT+ ++ E F P K K+++D T Y FV F +
Sbjct: 2 DDEQPKTLYVGNLSRDVTEALILELFGQIGPC-KSCKMIVD--TAGHDPYCFVEFYEHRH 58
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
+ MNG R + K V ++ + +Q D ++ VFVG+L +T
Sbjct: 59 ATATIAAMNG-----RKIL------GKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEIT 107
Query: 289 DEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ IR
Sbjct: 108 TDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIR 167
Query: 343 LSWG-RSPSNK 352
+W R P+ K
Sbjct: 168 TNWATRKPAPK 178
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q+ +++GDL + + FA G++ +V+++ TG+ +GYGF+ F
Sbjct: 84 PTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSF 143
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDDTP 172
++ AE +Q G + G + R NWA SF +
Sbjct: 144 FNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPAPKTTNESSSSKQLSFDEVVNQSSPS 201
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ T++ G + +T+ ++++TF P + +++ KGY FVRF A
Sbjct: 202 NCTVYCGGVTTGLTEQIMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFNSHEAAAHA 254
Query: 233 MTEMNG 238
+ +NG
Sbjct: 255 IVSVNG 260
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
DD T++VGNL VT+ + ELF Q G K+ AG C FV+F + A
Sbjct: 2 DDEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYC-FVEFYEHRHAT 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
+ +NG ++ G+ ++++W +P++++
Sbjct: 61 ATIAAMNGRKILGKEVKVNWATTPTSQK 88
>gi|302654241|ref|XP_003018929.1| hypothetical protein TRV_07061 [Trichophyton verrucosum HKI 0517]
gi|291182617|gb|EFE38284.1| hypothetical protein TRV_07061 [Trichophyton verrucosum HKI 0517]
Length = 543
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 141/329 (42%), Gaps = 66/329 (20%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE------------------ 123
R L++G L + E L F TG V +VK+I +K Q
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNVSQHLLLLYLSDLYLFFTYVLYV 161
Query: 124 -------------------GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA 164
YGFIE+ AER +QT NG + E R+NWA
Sbjct: 162 YLYLITSALLLVIFQSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSN 219
Query: 165 GEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRF 223
++DT H IFVGDL+ +V D +L + F A S A+V+ D TGR++GYGFV F
Sbjct: 220 TASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSA-CGSVSEARVMWDMKTGRSRGYGFVAF 278
Query: 224 GDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVA---------------- 267
+ ++ +A++ M+G + +R +R A K S S Q + A
Sbjct: 279 RERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPT 338
Query: 268 ---QSDD-----DPN-NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQF 318
QS D P TT +VGNL T L LF +G +V + A + FV+
Sbjct: 339 HGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQADRGFAFVKM 398
Query: 319 ADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
A A+ LNG + G+ ++ SWG+
Sbjct: 399 DTHENAAMAICQLNGYNVNGRPLKCSWGK 427
>gi|405119959|gb|AFR94730.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cryptococcus neoformans var. grubii H99]
Length = 434
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 148/323 (45%), Gaps = 49/323 (15%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGF 127
+ P Q + + L++G+L + + L FA G VV+ K+I RN Q G YGF
Sbjct: 10 ITPGQSAEAPKRPHLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFN-YGF 68
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTD 187
+E+ A++ L T NG + + E R+NWA G K D + +FVGDL+ +V D
Sbjct: 69 VEYADMRSADQALTTLNGRKIFDAE--IRVNWAYQGNQNKEDTQHHYHVFVGDLSPEVND 126
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
+L + F A + S A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R
Sbjct: 127 DVLSKAFGA-FGSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAIR 185
Query: 248 IGPATNKKT--------------------------VSASY-----------------QNS 264
+ A K + ++Y +
Sbjct: 186 VNWANQKTQTGGTRTGGATPSYSAPSMGAPPAPAGIPSAYGAPVPGVVPGVGVGGAVGSY 245
Query: 265 QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 324
+ S NTTV+VGNL T L LF YG +V +++ A + FV+ A
Sbjct: 246 ETVASQTPEFNTTVYVGNLIPYTTQADLIPLFQGYGYIVEIRMQADRGFAFVKLDTHQNA 305
Query: 325 EEALRMLNGTQLGGQNIRLSWGR 347
A+ L + G+ I+ SWG+
Sbjct: 306 ALAITHLQNQLVHGRPIKCSWGK 328
>gi|301758210|ref|XP_002914948.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2 [Ailuropoda
melanoleuca]
gi|410954993|ref|XP_003984143.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Felis catus]
Length = 375
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 138/273 (50%), Gaps = 12/273 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K S
Sbjct: 122 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKST 181
Query: 262 QNSQVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
S Q D P+N TV+ G + S +T++ +R+ FS +GQ++ +++ K
Sbjct: 182 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYS 241
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
FV+F A A+ +NGT + G ++ WG+
Sbjct: 242 FVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGK 274
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 20/183 (10%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
+D T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFYEHRH 58
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ MNG + +++ AT + Q D N+ VFVG+L +T
Sbjct: 59 AAAALAAMNGRKIMGKEVKVNWATTPSS-----------QKKDTSNHFHVFVGDLSPEIT 107
Query: 289 DEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ IR
Sbjct: 108 TEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIR 167
Query: 343 LSW 345
+W
Sbjct: 168 TNW 170
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 82 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 141
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 142 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSS 199
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 200 PSNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAA 252
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 253 HAIVSVNGT 261
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|380816028|gb|AFE79888.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
gi|383421175|gb|AFH33801.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
Length = 375
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 152/306 (49%), Gaps = 23/306 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K S
Sbjct: 122 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKST 181
Query: 262 QNSQVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
S Q D P+N TV+ G + S +T++ +R+ FS +GQ++ +++ K
Sbjct: 182 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYS 241
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ---PDP-NQWNAG 364
FV+F A A+ +NGT + G ++ WG+ +P +Q Q P P QW
Sbjct: 242 FVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPQPYGQWGQ- 300
Query: 365 YYGYAQ 370
+YG AQ
Sbjct: 301 WYGNAQ 306
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 21/184 (11%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
A+ MNG + +++ AT +Q D N+ VFVG+L +
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWATTPS-----------SQKKDTSNHFHVFVGDLSPEI 106
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ I
Sbjct: 107 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 166
Query: 342 RLSW 345
R +W
Sbjct: 167 RTNW 170
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 82 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 141
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 142 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSS 199
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 200 PSNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAA 252
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 253 HAIVSVNGT 261
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|402218978|gb|EJT99053.1| hypothetical protein DACRYDRAFT_24132 [Dacryopinax sp. DJM-731 SS1]
Length = 474
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 147/321 (45%), Gaps = 63/321 (19%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + E L FA G V VK+I RN Q G + YGF+E+ AE LQ
Sbjct: 14 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN-YGFVEYTDMRSAETALQ 72
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + + E R+NWA G K D + + +FVGDL+ +V D +L + F A +P+
Sbjct: 73 TLNGRKIFDTE--IRVNWAYQGQQNKEDTSGHYHVFVGDLSPEVNDEVLAKAFAA-FPTM 129
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA-- 259
A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R+ A N+KT A
Sbjct: 130 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA-NQKTQGAPG 188
Query: 260 ------------------------------------------------SYQNS-----QV 266
S+Q + QV
Sbjct: 189 NGGMPGIGGGMGMGGGMPTGMPMGMPMGGMPAMSPMGAARPMGMPQPVSFQTAPVSYEQV 248
Query: 267 AQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEE 326
N+T +VGNL T L LF G L +++ A + FV+ A
Sbjct: 249 LTQSPATNSTV-YVGNLVPFATQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHENAAT 307
Query: 327 ALRMLNGTQLGGQNIRLSWGR 347
A+ L G + G+ I++SWG+
Sbjct: 308 AIVSLQGQMIHGRPIKVSWGK 328
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 273 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADRSCAE 325
P ++VGNL VT+ L E+F+ G + HVKI G GFV++ D AE
Sbjct: 9 PRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYTDMRSAE 68
Query: 326 EALRMLNGTQLGGQNIRLSW 345
AL+ LNG ++ IR++W
Sbjct: 69 TALQTLNGRKIFDTEIRVNW 88
>gi|357479381|ref|XP_003609976.1| RNA-binding protein [Medicago truncatula]
gi|355511031|gb|AES92173.1| RNA-binding protein [Medicago truncatula]
Length = 415
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 150/302 (49%), Gaps = 41/302 (13%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + E L F+ G + K+IR +++ YGF+++ R+ A +
Sbjct: 46 RSVYVGNIHPQVSEPLLQELFSSAGALEGCKLIRKEKSS----YGFVDYFDRSSAAIAIV 101
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
T NG + Q+ ++NWA + G++ D + IFVGDL+ +VTD L F A Y S
Sbjct: 102 TLNGRNIFG--QSIKVNWA-YTRGQREDTSGHFHIFVGDLSPEVTDATLYACFSA-YSSC 157
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT--------- 252
A+V+ D+ TGR++G+GFV F ++ E A+ ++ G + +R +R AT
Sbjct: 158 SDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGKWLGSRQIRCNWATKGANMNGEN 217
Query: 253 ----NKKTVSASYQNSQVAQ---SDDDPNN----TTVFVGNLDSIVTDEHLRELFSQY-- 299
+K V + S+ AQ SDD P TTV+VGNL VT L F
Sbjct: 218 QSSESKSVVELTSGTSEEAQEMTSDDSPEKNPQYTTVYVGNLAPEVTSVDLHHHFHALGV 277
Query: 300 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRL-----------SWGRS 348
G + V++ K GFV+++ A A++M N L G+ I++ SWG
Sbjct: 278 GTIEDVRVQRDKGFGFVRYSTHGEAALAIQMGNTRFLFGKPIKMHITRKKAVSKCSWGSK 337
Query: 349 PS 350
P+
Sbjct: 338 PT 339
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 82/189 (43%), Gaps = 23/189 (12%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ V++ +LQE F S+ GA + YGFV + D S
Sbjct: 41 DSSTCRSVYVGNIHPQVSEPLLQELF-----SSAGALEGCKLIRKEKSSYGFVDYFDRSS 95
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ +NG + +++ A + Q +D + +FVG+L VT
Sbjct: 96 AAIAIVTLNGRNIFGQSIKVNWAYTR------------GQREDTSGHFHIFVGDLSPEVT 143
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ ++ G FV F ++ A+ A+ L G LG + IR
Sbjct: 144 DATLYACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGKWLGSRQIR 203
Query: 343 LSWGRSPSN 351
+W +N
Sbjct: 204 CNWATKGAN 212
>gi|407038416|gb|EKE39116.1| RNA-binding protein TIA-1, putative [Entamoeba nuttalli P19]
Length = 306
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 144/272 (52%), Gaps = 17/272 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+++ + + +DE L F+ G VV+ K++R+K +G GYGF+EF+ A
Sbjct: 43 KSVHVSGIHESVDEILLGRIFSIVGHVVSCKIMRDK-SGVHAGYGFVEFVDSTTARFAKD 101
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
+G + E ++NW S+ A ++++ ++ IFVG L +V D +L +TF+ ++
Sbjct: 102 NMDGRVVYGRE--LKVNW-SYTA--QQENQGNYKIFVGGLQPEVNDDLLYKTFQ-KFGRV 155
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+V+ TG++KGYGFV F + + AM MNG R +++ N T + +
Sbjct: 156 TDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIKV----NWVTSNIAS 211
Query: 262 QNSQVAQSDDDPNN------TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGF 315
+ Q +S D+ NN TV++GN+ V + L++L ++YG + V++ K F
Sbjct: 212 KTEQPKRSYDEINNETSSQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAF 271
Query: 316 VQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
++F+ A A+ M NG + G +R SWGR
Sbjct: 272 IKFSKHESATSAILMCNGKIINGSTLRCSWGR 303
>gi|126273037|ref|XP_001367935.1| PREDICTED: nucleolysin TIAR isoform 3 [Monodelphis domestica]
Length = 385
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 167/348 (47%), Gaps = 42/348 (12%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ GQP RTL++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 2 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYE 56
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTP-------------DH-TIFV 178
A L NG + E ++NWA+ + +K+D + DH +FV
Sbjct: 57 HRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSSKYIVAITVHLRDQDHFHVFV 114
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDL+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G
Sbjct: 115 GDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGG 173
Query: 239 VFCSTRPMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEH 291
+ R +R AT K S Q + Q + P N TV+ G + S +TD+
Sbjct: 174 QWLGGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQL 233
Query: 292 LRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPS 350
+R+ FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP
Sbjct: 234 MRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPD 293
Query: 351 NKQ--AQPDPNQWNAGYYGYAQGYEN---YG-YAAAAPQDPSMYYGGY 392
+ Q D +QW ++Q Y N YG Y A Q PS YG Y
Sbjct: 294 MTKNFQQVDYSQWGQ----WSQVYGNPQQYGQYMANGWQVPS--YGMY 335
>gi|188219593|ref|NP_071320.2| nucleolysin TIA-1 isoform p40 isoform 1 [Homo sapiens]
gi|114577932|ref|XP_001141475.1| PREDICTED: uncharacterized protein LOC459303 isoform 1 [Pan
troglodytes]
gi|397521826|ref|XP_003830987.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Pan paniscus]
gi|119620229|gb|EAW99823.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_a [Homo sapiens]
gi|410254976|gb|JAA15455.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298558|gb|JAA27879.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353837|gb|JAA43522.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 375
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 152/306 (49%), Gaps = 23/306 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K S
Sbjct: 122 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKST 181
Query: 262 QNSQVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
S Q D P+N TV+ G + S +T++ +R+ FS +GQ++ +++ K
Sbjct: 182 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYS 241
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ---PDP-NQWNAG 364
FV+F A A+ +NGT + G ++ WG+ +P +Q Q P P QW
Sbjct: 242 FVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPQPYGQWGQ- 300
Query: 365 YYGYAQ 370
+YG AQ
Sbjct: 301 WYGNAQ 306
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 21/184 (11%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
A+ MNG + +++ AT +Q D N+ VFVG+L +
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWATTPS-----------SQKKDTSNHFHVFVGDLSPEI 106
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ I
Sbjct: 107 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 166
Query: 342 RLSW 345
R +W
Sbjct: 167 RTNW 170
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 82 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 141
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 142 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSS 199
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 200 PSNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAA 252
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 253 HAIVSVNGT 261
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|89272470|emb|CAJ83096.1| OTTXETP00000006403 [Xenopus (Silurana) tropicalis]
Length = 389
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 163/347 (46%), Gaps = 37/347 (10%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG-------- 124
+ GQP RTL++G+L + E + F+ G + K+I + + G
Sbjct: 2 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDSRRVGASVSFPVL 58
Query: 125 -------YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIF 177
Y F+EF A L NG + E ++NWA+ + +K+D + +F
Sbjct: 59 PNTNNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVF 116
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDL+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M
Sbjct: 117 VGDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMG 175
Query: 238 GVFCSTRPMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDE 290
G + R +R AT K S Q + Q + P N TV+ G + S +T++
Sbjct: 176 GQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIGSGLTEQ 235
Query: 291 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP- 349
+R+ F +GQ++ +++ K F++F+ A A+ +NGT + G ++ WG+
Sbjct: 236 LMRQTFGVFGQILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNGTTIEGHVVKCYWGKETP 295
Query: 350 --SNKQAQPDPNQWNAGYYGYAQGY-ENYG-YAAAAPQDPSMYYGGY 392
+ Q D +QW G +G G + YG Y A Q PS YG Y
Sbjct: 296 DMTKNFQQVDYSQW--GQWGQMYGSPQQYGQYVANGWQVPS--YGMY 338
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 79/188 (42%), Gaps = 27/188 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 100 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 159
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 160 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 217
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF +++ KGY F+RF
Sbjct: 218 PKNCTVYCGGIGSGLTEQLMRQTFGV-------FGQILEIRVFPEKGYSFIRFSTHDSAA 270
Query: 231 RAMTEMNG 238
A+ +NG
Sbjct: 271 HAIVSVNG 278
>gi|413920410|gb|AFW60342.1| nucleolysin TIAR [Zea mays]
Length = 447
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 147/290 (50%), Gaps = 30/290 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + +T L F G V K+IR +++ +GFI++ R A +
Sbjct: 75 RSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSS----FGFIDYYDRRYAALAIL 130
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
+ NG + Q ++NWA R+DT H IFVGDL +VTD L F Y +
Sbjct: 131 SLNGRQLYG--QPIKVNWAY--TSTPREDTSGHFNIFVGDLCPEVTDATLFAFFSG-YST 185
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN------- 253
A+V+ D+ TGR++G+GFV F ++ + A+ ++NG + R +R AT
Sbjct: 186 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCNWATKGANAGEE 245
Query: 254 ----KKTVSASYQNSQVAQ---SDDDPNN----TTVFVGNL--DSIVTDEHLRELFSQYG 300
V S +S+ + ++D P N TTV+VGNL ++ + D HL G
Sbjct: 246 KQILDTKVDLSNGSSESGKENPNEDGPENNPQFTTVYVGNLPHEATMNDVHLFFHSLGAG 305
Query: 301 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
+ V++ K GFV+++ A A++M NG +GG+ I+ SWG P+
Sbjct: 306 SIEEVRVTRDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQIKCSWGSKPT 355
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 23/189 (12%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VTD +LQE F++ P +G K++ +GF+ + D
Sbjct: 70 DSSTCRSVYVGNIHLQVTDTVLQEVFQSIGP-VEGCKLI----RKEKSSFGFIDYYDRRY 124
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ +NG +P+++ A +D + +FVG+L VT
Sbjct: 125 AALAILSLNGRQLYGQPIKVNWAYTS------------TPREDTSGHFNIFVGDLCPEVT 172
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ ++ G FV F ++ A+ A+ LNG LG + IR
Sbjct: 173 DATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIR 232
Query: 343 LSWGRSPSN 351
+W +N
Sbjct: 233 CNWATKGAN 241
>gi|224115710|ref|XP_002332123.1| predicted protein [Populus trichocarpa]
gi|222874943|gb|EEF12074.1| predicted protein [Populus trichocarpa]
Length = 425
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 141/292 (48%), Gaps = 30/292 (10%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R +++G++ + + L FA G + K+IR ++ YGF+++ ++ A +
Sbjct: 44 CRRVYVGNIHVNVTDKLLAEVFATAGPLAGCKLIRKDKSS----YGFVDYHDQSSAALAI 99
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
T +G + Q ++NWA +G ++ D + +FVGDL+ +V D L F +PS
Sbjct: 100 MTLHGRQLYG--QALKVNWA-YGNSQREDTSGHFHVFVGDLSPEVIDANLFACFSV-FPS 155
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D TGR+KGYGFV F ++ E A+ ++ G + R +R AT +
Sbjct: 156 CSNARVMWDHKTGRSKGYGFVSFRNQQEAQSAINDLTGKWLGNRQIRCNWATKGVESNED 215
Query: 261 YQNS----------------QVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQYG 300
QNS Q + +++ P N TTV+VGNL VT L F G
Sbjct: 216 KQNSDNQNAVVLTNGSSEGGQESTNEEAPENNPAYTTVYVGNLSHEVTQAELHRHFHALG 275
Query: 301 QLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
V V++ K GFV++ A A++ NG + G+ ++ SWG P+
Sbjct: 276 AGVIEDVRVQRDKGFGFVRYNTHEEAASAIQTGNGKIVCGKPVKCSWGSKPT 327
>gi|89272716|emb|CAJ83609.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 389
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 142/284 (50%), Gaps = 23/284 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E + F+ G + K+I + T + Y F+EF A L
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMD--TAGNDPYCFVEFFEHRHAAASLA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRD----------DTPDH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
AT K S S Q + P+N TV+ G + S +T++ +R+ FS +GQ++
Sbjct: 182 ATRKPPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
V++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 242 EVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGK 285
>gi|326495674|dbj|BAJ85933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 152
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/139 (51%), Positives = 91/139 (65%), Gaps = 8/139 (5%)
Query: 267 AQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEE 326
SD D NN TV+VG LD V+++ LR+ F++YG + VKIP GK+CGFVQ+ +R+ AEE
Sbjct: 13 GHSDGDSNNRTVYVGGLDQNVSEDELRKSFAKYGDVASVKIPLGKQCGFVQYVNRTDAEE 72
Query: 327 ALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAG---YYGYAQGYENYGYAAAAPQ 383
AL+ LNG +G Q +RLSWGRSPS+KQ++ D YYG Y YGYA+ P
Sbjct: 73 ALQGLNGAVIGKQAVRLSWGRSPSHKQSRGDSGNRRNNNNMYYG-TPFYGGYGYASPVPH 131
Query: 384 DPSMY---YGGYPGYGNYQ 399
P+MY YG YP YGN Q
Sbjct: 132 -PNMYAPAYGAYPFYGNQQ 149
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 66 AGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGY 125
+G + P G RT+++G L + E L FA G+V +VK+ KQ
Sbjct: 7 SGSSTPGHSDGDSNN-RTVYVGGLDQNVSEDELRKSFAKYGDVASVKIPLGKQC------ 59
Query: 126 GFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160
GF+++++R AE LQ NG + G+Q RL+W
Sbjct: 60 GFVQYVNRTDAEEALQGLNGAVI--GKQAVRLSWG 92
>gi|45361397|ref|NP_989276.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
gi|39795756|gb|AAH64164.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 386
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 142/284 (50%), Gaps = 23/284 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E + F+ G + K+I + T + Y F+EF A L
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMD--TAGNDPYCFVEFFEHRHAAASLA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRD----------DTPDH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
AT K S S Q + P+N TV+ G + S +T++ +R+ FS +GQ++
Sbjct: 182 ATRKPPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
V++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 242 EVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGK 285
>gi|58266842|ref|XP_570577.1| mRNA catabolism, nonsense-mediated-related protein [Cryptococcus
neoformans var. neoformans JEC21]
gi|134110468|ref|XP_776061.1| hypothetical protein CNBD1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258729|gb|EAL21414.1| hypothetical protein CNBD1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226810|gb|AAW43270.1| mRNA catabolism, nonsense-mediated-related protein, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 434
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 148/323 (45%), Gaps = 49/323 (15%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGF 127
+ P Q + + L++G+L + + L FA G VV+ K+I RN Q G YGF
Sbjct: 10 ITPGQSAEAPKRPHLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFN-YGF 68
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTD 187
+E+ A++ L T NG + + E R+NWA G K D + +FVGDL+ +V D
Sbjct: 69 VEYADMRSADQALTTLNGRKIFDAE--IRVNWAYQGNQNKEDTQHHYHVFVGDLSPEVND 126
Query: 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247
+L + F A + S A+V+ D +G+++GYGF+ F D+++ +A+ MNG + +R +R
Sbjct: 127 DVLSKAFGA-FGSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAIR 185
Query: 248 IGPATNK--------------------------KTVSASY-----------------QNS 264
+ A K V ++Y +
Sbjct: 186 VNWANQKTQTGGTRTGGGTPSYPAPPMGAPPAPAGVPSAYGAPAPGVVPGVGVGGAVGSY 245
Query: 265 QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 324
+ S NTTV+VGNL T L LF YG +V +++ A + FV+ A
Sbjct: 246 ETVASQTPEFNTTVYVGNLIPYTTQADLIPLFQGYGYIVEIRMQADRGFAFVKLDTHQNA 305
Query: 325 EEALRMLNGTQLGGQNIRLSWGR 347
A+ L + G+ I+ SWG+
Sbjct: 306 ALAITHLQNQLVHGRPIKCSWGK 328
>gi|341893520|gb|EGT49455.1| CBN-TIAR-2 protein [Caenorhabditis brenneri]
Length = 420
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 143/292 (48%), Gaps = 30/292 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + + ++ T F G V K+I + Q G + Y FIEF A + LQ
Sbjct: 38 RTLFVGNLDPAVTDEFIATLFNQMGAVTKAKIIFDFQ-GLADPYAFIEFSDHNQAAQALQ 96
Query: 142 TFNGTPMPNGEQNFRLNWASF----GAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRA 196
+ NG + + E R+NWA G ++ D H +FVGDL++++ L+E F
Sbjct: 97 SMNGRQLLDRE--LRVNWAVEPNQPGDSSRKMDYSRHFHVFVGDLSSEIDSTKLKEAFLP 154
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK-- 254
+ AK++ D T + KGYGFV + + RA+ +MNG + R +R A+ K
Sbjct: 155 -FGEVSEAKIIRDTTTNKAKGYGFVSYPRREDAERAIEQMNGQWLGRRTIRTNWASRKPG 213
Query: 255 -------------KTVSASYQNSQVAQSDD-----DPNNTTVFVGNLDSIVTDEHLRELF 296
+ + D+ P+NT+V+VG + S+ DE +R F
Sbjct: 214 EEGERRGGGFERDRERGERFHGGFEKTYDEIFHQTSPDNTSVYVGQIGSLTEDE-IRRAF 272
Query: 297 SQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
++G + V+I + FV+F + A A+ +N T++ GQ +R SWG+S
Sbjct: 273 DRFGAINEVRIFKLQGYAFVKFEQKEPAARAIVQMNNTEIMGQMVRCSWGKS 324
>gi|348542282|ref|XP_003458614.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oreochromis
niloticus]
Length = 386
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 142/277 (51%), Gaps = 12/277 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F G + K+I + T + Y F+EF A +
Sbjct: 7 KTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKILGKE--VKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAF-APFGKI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK---KTVS 258
+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K KT S
Sbjct: 122 SDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTS 181
Query: 259 ASYQNSQVAQSD----DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
+ Q++ + P+N TV+ G + + +T++ +R+ FS +GQ++ +++ K
Sbjct: 182 ETTNTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPEKGYS 241
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 351
FV+F A A+ +NGT + G ++ WG+ ++
Sbjct: 242 FVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTD 278
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 21/198 (10%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
DD T++VG+L+ DVT+ ++ E F P K K+++D T Y FV F +
Sbjct: 2 DDDQPKTLYVGNLSRDVTEALILELFGQIGPC-KSCKMIVD--TAGHDPYCFVEFYEHRH 58
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
+ MNG R + K V ++ + +Q D ++ VFVG+L +T
Sbjct: 59 ATATIAAMNG-----RKIL------GKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEIT 107
Query: 289 DEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ IR
Sbjct: 108 TDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIR 167
Query: 343 LSWG-RSPSNKQAQPDPN 359
+W R P+ K N
Sbjct: 168 TNWATRKPAPKTTSETTN 185
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q+ +++GDL + + FA G++ +V+++ TG+ +GYGF+ F
Sbjct: 84 PTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSF 143
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDDTP 172
++ AE +Q G + G + R NWA SF +
Sbjct: 144 FNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPAPKTTSETTNTKQLSFDEVVNQSSPS 201
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ T++ G + +T+ ++++TF P + +++ KGY FVRF A
Sbjct: 202 NCTVYCGGVTTGLTEQIMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFNSHEAAAHA 254
Query: 233 MTEMNG 238
+ +NG
Sbjct: 255 IVSVNG 260
>gi|348507121|ref|XP_003441105.1| PREDICTED: nucleolysin TIAR [Oreochromis niloticus]
Length = 382
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 148/290 (51%), Gaps = 15/290 (5%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E + F G + K+I + + Y F+EF A L
Sbjct: 8 RTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSN--DPYCFVEFFEHRDAAAALA 65
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL ++T ++ F A +
Sbjct: 66 AMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLNPEITTEDVRVAF-APFGKI 122
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+VV D TG++KGYGFV F ++ + A+ M+G + R +R AT K S
Sbjct: 123 SDARVVKDMTTGKSKGYGFVSFYNKLDAENAIINMSGQWLGGRQIRTNWATRKPPAPKST 182
Query: 262 QN--SQVAQSDD-----DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
Q+ S+ + DD P N TV+ G + S +++ +R+ FS +GQ++ V++ K
Sbjct: 183 QDNGSKQLRFDDVVNQSSPQNCTVYCGGIQSGLSEHLMRQTFSPFGQIMEVRVFPEKGYS 242
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPNQW 361
F++F+ A A+ +NGT + G ++ WG+ SP ++ Q D +QW
Sbjct: 243 FIRFSSHDSAAHAIVSVNGTVIEGHVVKCFWGKESPDMAKSPQQVDYSQW 292
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 109/231 (47%), Gaps = 31/231 (13%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D+T T++VG+L+ DVT+ ++ + F P K K++ + + Y FV F + +
Sbjct: 3 DETHPRTLYVGNLSRDVTEILILQLFTQIGP-CKSCKMITEHTS--NDPYCFVEFFEHRD 59
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ MNG + +++ AT +Q D N+ VFVG+L+ +T
Sbjct: 60 AAAALAAMNGRKILGKEVKVNWATTPS-----------SQKKDTSNHFHVFVGDLNPEIT 108
Query: 289 DEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
E +R F+ +G++ ++ K GFV F ++ AE A+ ++G LGG+ IR
Sbjct: 109 TEDVRVAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIINMSGQWLGGRQIR 168
Query: 343 LSWG--RSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGG 391
+W + P+ K Q + G Q + ++PQ+ ++Y GG
Sbjct: 169 TNWATRKPPAPKSTQDN---------GSKQLRFDDVVNQSSPQNCTVYCGG 210
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 86/189 (45%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 83 TTPSSQKKDTSNHFHVFVGDLNPEITTEDVRVAFAPFGKISDARVVKDMTTGKSKGYGFV 142
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF-----------GAGEKR-DDTPDH-- 174
F ++ AE + +G + G + R NWA+ G+ + R DD +
Sbjct: 143 SFYNKLDAENAIINMSGQWL--GGRQIRTNWATRKPPAPKSTQDNGSKQLRFDDVVNQSS 200
Query: 175 ----TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
T++ G + + ++++++++TF + + +V + KGY F+RF
Sbjct: 201 PQNCTVYCGGIQSGLSEHLMRQTF-SPFGQIMEVRVFPE------KGYSFIRFSSHDSAA 253
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 254 HAIVSVNGT 262
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 270 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG----FVQFADRSCAE 325
DD+ + T++VGNL VT+ + +LF+Q G K+ FV+F + A
Sbjct: 2 DDETHPRTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAA 61
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 62 AALAAMNGRKILGKEVKVNWATTPSSQK 89
>gi|195117982|ref|XP_002003519.1| GI17961 [Drosophila mojavensis]
gi|193914094|gb|EDW12961.1| GI17961 [Drosophila mojavensis]
Length = 346
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 106/178 (59%), Gaps = 12/178 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE V+++RNK TG+ GY F+ FIS A +
Sbjct: 8 LWMGSLEPYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGA---GEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG P+P N FRLN AS G +R+ +++VGDL++DV DY L + F ++
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE----FSVWVGDLSSDVDDYSLYKVFSSK 123
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
Y S K AKV++D L G +KGYGFVRFG E EQ A+ +MNG V T+P++I A K
Sbjct: 124 YTSIKTAKVILDSL-GFSKGYGFVRFGIEDEQKSALYDMNGYVGLGTKPIKICNAVPK 180
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 21/178 (11%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L +T+ + FR +++ ++ TG GY FV F + L AM +
Sbjct: 8 LWMGSLEPYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 236 MNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNT---TVFVGNLDSIVTDEHL 292
+NG +P+ P TN ++ + + S P N +V+VG+L S V D L
Sbjct: 68 LNG-----KPI---PGTNPIV---RFRLNSASNSYKLPGNEREFSVWVGDLSSDVDDYSL 116
Query: 293 RELF-SQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRL 343
++F S+Y + K+ K GFV+F + AL +NG LG + I++
Sbjct: 117 YKVFSSKYTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKSALYDMNGYVGLGTKPIKI 174
>gi|385302688|gb|EIF46808.1| mrna binding post-transcriptional regulator [Dekkera bruxellensis
AWRI1499]
Length = 257
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 103/186 (55%), Gaps = 19/186 (10%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTG-----EVVAVKVIRNKQTGQI----EGYGFIEFISRA 134
LW+G+L DE + +A + +VK+IR++Q Q+ GY F+ F +
Sbjct: 40 LWMGELDQRWDEITIRQIWAALLGPMGIXIHSVKLIRDRQXSQMGLSNAGYCFVRFYNXE 99
Query: 135 GAERVLQTFNGTPMPN--GEQNFRLNWASFGAGEK--------RDDTPDHTIFVGDLAAD 184
A +VL FN P+P G + FRLNW+S P+ +IFVGDL
Sbjct: 100 DASKVLTMFNXKPIPGSAGRRFFRLNWSSANIQAAAATSTXLPESAAPEFSIFVGDLPQG 159
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T+++L ETF ARYPS AKV+ID+ TGR +G+GFV+F +E+ RA+TEM R
Sbjct: 160 ITEHLLYETFHARYPSCASAKVMIDQNTGRVRGFGFVKFFXNAERQRALTEMQDYVLLGR 219
Query: 245 PMRIGP 250
P+R+ P
Sbjct: 220 PIRVSP 225
>gi|417410125|gb|JAA51540.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 367
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 149/303 (49%), Gaps = 17/303 (5%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F+ G + K+I + + Y F+EF A L N
Sbjct: 3 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMN 60
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
G + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A + A
Sbjct: 61 GRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAF-APFGKISDA 117
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNS 264
+VV D TG++KGYGFV F ++ + A+ M G + R +R AT K S Q +
Sbjct: 118 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQEN 177
Query: 265 QVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 317
Q + P N TV+ G + S +TD+ +R+ FS +GQ++ +++ K FV+
Sbjct: 178 NTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVR 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPNQWN--AGYYGYAQGY 372
F+ A A+ +NGT + G ++ WG+ SP + Q D +QW + YG Q Y
Sbjct: 238 FSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQY 297
Query: 373 ENY 375
Y
Sbjct: 298 GQY 300
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 75 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 134
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 135 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 192
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 193 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 245
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 246 HAIVSVNGT 254
>gi|226290334|gb|EEH45818.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Paracoccidioides brasiliensis Pb18]
Length = 508
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 136/285 (47%), Gaps = 42/285 (14%)
Query: 102 FAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNG-------------TPM 148
F TG V +VK+I +K + + YGF+E+ AER + T NG P
Sbjct: 104 FETTGHVQSVKIIPDKNSKGLN-YGFVEYDDPGAAERAMATLNGRRVHQSNYDIRSLKPH 162
Query: 149 PNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVV 207
P +Q R+NWA ++DT +H IFVGDL+ +V D +L + F A + S A+V+
Sbjct: 163 P-LQQEIRVNWAYQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVM 220
Query: 208 IDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVA 267
D TGR++GYGFV F + S+ +A++ M+G + +R +R A K S S Q + A
Sbjct: 221 WDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAA 280
Query: 268 -------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLRELFSQYGQL 302
QS D P TT +VGNL T L LF +G +
Sbjct: 281 MGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYV 340
Query: 303 VHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
V + A + FV+ A A+ L+G + G+ ++ SWG+
Sbjct: 341 VETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGK 385
>gi|195437766|ref|XP_002066811.1| GK24678 [Drosophila willistoni]
gi|194162896|gb|EDW77797.1| GK24678 [Drosophila willistoni]
Length = 357
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 106/178 (59%), Gaps = 12/178 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE V+++RNK TG+ GY F+ FIS A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGA---GEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG P+P N FRLN AS G +R+ +++VGDL++DV DY L + F ++
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE----FSVWVGDLSSDVDDYQLYKVFSSK 123
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
+ S K AKV++D L G +KGYGFVRFG E EQ A+ +MNG + TRP++I A K
Sbjct: 124 FTSIKTAKVILDSL-GFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTRPIKICNAVPK 180
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 29/212 (13%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L + +T+ + FR +++ ++ TG GY FV F + L AM +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 236 MNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNT---TVFVGNLDSIVTDEHL 292
+NG +P+ P TN ++ + + S P N +V+VG+L S V D L
Sbjct: 68 LNG-----KPI---PGTNPIV---RFRLNSASNSYKLPGNEREFSVWVGDLSSDVDDYQL 116
Query: 293 RELFS------QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSW 345
++FS + +++ + K GFV+F + AL +NG LG + I++
Sbjct: 117 YKVFSSKFTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTRPIKIC- 175
Query: 346 GRSPSNKQAQPDPNQWNAGYYGYAQGYENYGY 377
A P P A G NYGY
Sbjct: 176 -------NAVPKPKAELAAALGMGGANSNYGY 200
>gi|301759213|ref|XP_002915456.1| PREDICTED: nucleolysin TIAR-like [Ailuropoda melanoleuca]
Length = 477
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 155/316 (49%), Gaps = 19/316 (6%)
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
P GQP + + ++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 103 PLHTGQPQD--SGYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFY 158
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQ 191
A L NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++
Sbjct: 159 EHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIK 216
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +R A
Sbjct: 217 SAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 275
Query: 252 TNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 304
T K S Q + Q + P N TV+ G + S +TD+ +R+ FS +GQ++
Sbjct: 276 TRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIME 335
Query: 305 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPNQW 361
+++ K FV+F+ A A+ +NGT + G ++ WG+ SP + Q D +QW
Sbjct: 336 IRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQW 395
Query: 362 N--AGYYGYAQGYENY 375
+ YG Q Y Y
Sbjct: 396 GQWSQVYGNPQQYGQY 411
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 186 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 245
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 246 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 303
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF + + +V + KGY FVRF
Sbjct: 304 PKNCTVYCGGIASGLTDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAA 356
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 357 HAIVSVNGT 365
>gi|414875536|tpg|DAA52667.1| TPA: hypothetical protein ZEAMMB73_787505 [Zea mays]
Length = 448
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Query: 154 NFRLNWASFGAGEKRDDTP-DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLT 212
+F+L+ A+ DD+ DH+IF+G+LA DVT YML F+A YPS K AK++ D+ T
Sbjct: 340 DFKLDLATQQERHAADDSSSDHSIFIGNLAYDVTGYMLHHLFKAHYPSVKSAKIIFDKST 399
Query: 213 GRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
G +K YGFV+FGD EQ++A+T+MNG +CSTRPMRIGP KK++
Sbjct: 400 GLSKCYGFVQFGDVDEQIQALTKMNGAYCSTRPMRIGPVPKKKSM 444
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 269 SDDDPNNTTVFVGNLDSIVTDEHLRELFSQY------GQLVHVKIPAGKRC-GFVQFADR 321
+DD ++ ++F+GNL VT L LF + +++ K +C GFVQF D
Sbjct: 354 ADDSSSDHSIFIGNLAYDVTGYMLHHLFKAHYPSVKSAKIIFDKSTGLSKCYGFVQFGDV 413
Query: 322 SCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD 357
+AL +NG + +R+ G P K P+
Sbjct: 414 DEQIQALTKMNGAYCSTRPMRI--GPVPKKKSMYPN 447
>gi|6755783|ref|NP_035715.1| nucleolysin TIA-1 isoform 1 [Mus musculus]
gi|1729966|sp|P52912.1|TIA1_MOUSE RecName: Full=Nucleolysin TIA-1; AltName: Full=RNA-binding protein
TIA-1; AltName: Full=T-cell-restricted intracellular
antigen-1; Short=TIA-1
gi|437057|gb|AAA03711.1| TIA [Mus musculus]
gi|1616673|gb|AAC52871.1| RNA binding protein TIA-1 [Mus musculus]
gi|26353510|dbj|BAC40385.1| unnamed protein product [Mus musculus]
gi|74188216|dbj|BAE25782.1| unnamed protein product [Mus musculus]
gi|148666751|gb|EDK99167.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_a
[Mus musculus]
Length = 386
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 154/317 (48%), Gaps = 34/317 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
AT K S S Q S PNN TV+ G + S +T++ +R+ FS +GQ++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ-- 355
+++ K FV+F+ A A+ +NGT + G ++ WG+ +P +Q Q
Sbjct: 242 EIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIG 301
Query: 356 --PDPNQWNAGYYGYAQ 370
P QW +YG AQ
Sbjct: 302 YPPTYGQWGQ-WYGNAQ 317
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 10/184 (5%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
A+ MNG + +++ AT + +S V + ++ VFVG+L +
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEI 117
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ I
Sbjct: 118 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 177
Query: 342 RLSW 345
R +W
Sbjct: 178 RTNW 181
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|413916539|gb|AFW56471.1| hypothetical protein ZEAMMB73_945385 [Zea mays]
Length = 381
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Query: 154 NFRLNWASFGAGEKRDDTP-DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLT 212
+F+L+ A+ DD+ DH+IF+G+LA DVT YML F+A YPS K AK++ D+ T
Sbjct: 273 DFKLDLATQQERHAADDSSSDHSIFIGNLAYDVTGYMLHHLFKAHYPSVKSAKIIFDKST 332
Query: 213 GRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
G +K YGFV+FGD EQ++A+T+MNG +CSTRPMRIGP KK++
Sbjct: 333 GLSKCYGFVQFGDVDEQIQALTKMNGAYCSTRPMRIGPVPKKKSM 377
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 269 SDDDPNNTTVFVGNLDSIVTDEHLRELFSQY------GQLVHVKIPAGKRC-GFVQFADR 321
+DD ++ ++F+GNL VT L LF + +++ K +C GFVQF D
Sbjct: 287 ADDSSSDHSIFIGNLAYDVTGYMLHHLFKAHYPSVKSAKIIFDKSTGLSKCYGFVQFGDV 346
Query: 322 SCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPD 357
+AL +NG + +R+ G P K P+
Sbjct: 347 DEQIQALTKMNGAYCSTRPMRI--GPVPKKKSMYPN 380
>gi|363750388|ref|XP_003645411.1| hypothetical protein Ecym_3082 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889045|gb|AET38594.1| Hypothetical protein Ecym_3082 [Eremothecium cymbalariae
DBVPG#7215]
Length = 586
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 113/227 (49%), Gaps = 53/227 (23%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ----------------------- 118
RTLW+GDL DET + + G V VK+IR K+
Sbjct: 22 RTLWMGDLDPSFDETTIQQIWMTLGHQVQVKLIRAKKNLLIPCSTSSTLASSQHVEDERI 81
Query: 119 -----------TGQIE--GYGFIEFISRAGAERVLQTFNGTPMPN-------------GE 152
T Q+ GY F++F S A+ LQ N TP+PN +
Sbjct: 82 QINGVSFIDPNTTQLHHAGYCFVQFPSLQEAQAGLQ-LNSTPLPNLISSTTHNPTNPTAK 140
Query: 153 QNFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDR 210
+NFRLNWAS GA + D TP+ ++FVGDL+ T+ L F+ ++ S K +V+ D
Sbjct: 141 RNFRLNWAS-GATLQSDIPTTPEFSLFVGDLSPTATEAHLLSLFQTKFKSVKTVRVMTDP 199
Query: 211 LTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+TG ++ +GFVRF DE E+ RA+ EMNG++C R +R+ AT + +
Sbjct: 200 ITGASRCFGFVRFADEQERRRALVEMNGIWCQGRQLRVAYATPRNNI 246
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 54/77 (70%)
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
DP+NTTVF+G L++ +T+ L+ LF +G ++ VK+P GK CGFV+F R AE A++ +
Sbjct: 394 DPSNTTVFIGGLNNQITESQLQSLFMPFGNILSVKVPPGKGCGFVKFEHRLDAEAAIQGM 453
Query: 332 NGTQLGGQNIRLSWGRS 348
G +G IRLSWGR+
Sbjct: 454 QGFIVGNSAIRLSWGRT 470
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 18/163 (11%)
Query: 217 GYGFVRFGDESE-----QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDD 271
GY FV+F E QL + T + + ST P T K+ ++ + QSD
Sbjct: 100 GYCFVQFPSLQEAQAGLQLNS-TPLPNLISSTTHNPTNP-TAKRNFRLNWASGATLQSDI 157
Query: 272 DPN-NTTVFVGNLDSIVTDEHLRELF-SQYGQLVHVK-----IPAGKRC-GFVQFADRSC 323
++FVG+L T+ HL LF +++ + V+ I RC GFV+FAD
Sbjct: 158 PTTPEFSLFVGDLSPTATEAHLLSLFQTKFKSVKTVRVMTDPITGASRCFGFVRFADEQE 217
Query: 324 AEEALRMLNGTQLGGQNIRLSWGRSPSN---KQAQPDPNQWNA 363
AL +NG G+ +R+++ +N +Q P P Q +
Sbjct: 218 RRRALVEMNGIWCQGRQLRVAYATPRNNILQQQQIPVPGQLDV 260
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T++IG L + E+ L + F G +++VKV K G GF++F R AE +Q
Sbjct: 399 TVFIGGLNNQITESQLQSLFMPFGNILSVKVPPGK------GCGFVKFEHRLDAEAAIQG 452
Query: 143 FNGTPMPNGEQNFRLNW 159
G + G RL+W
Sbjct: 453 MQGFIV--GNSAIRLSW 467
>gi|148909819|gb|ABR17996.1| unknown [Picea sitchensis]
Length = 490
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 151/313 (48%), Gaps = 51/313 (16%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + E L F G + K+I+ +++ YGF+++ A +
Sbjct: 78 CRSVYVGNISVHVTEGLLAEVFGAVGPLEGCKLIKKEKSS----YGFVDYYDHRSAANSI 133
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG + Q ++NWA + +G++ D T ++IFVGDL+ +VTD L F + YPS
Sbjct: 134 LHLNGKQIYG--QAIKVNWA-YASGQREDTTGHYSIFVGDLSPEVTDAALFACF-SIYPS 189
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT-------- 252
A+V+ D+ +GR++G+GFV F ++ + A+ +M G +RP+R AT
Sbjct: 190 CSDARVMWDQKSGRSRGFGFVSFRNQQDADNAINQMTGKTLGSRPIRCNWATKSSSGNQS 249
Query: 253 -NKKTVSASYQN--------------------------------SQVAQSDDDPNNTTVF 279
+K+T + + +Q + +++P+ TTV+
Sbjct: 250 DDKQTSEMQFASNASNNTSANGSADHNISAGTTAVGTGGQQKGGAQTSGPENNPSYTTVY 309
Query: 280 VGNLDSIVTDEHLRELFSQYGQLV--HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLG 337
+GNL VT L F G V V++ K GFV++ A A+++ NG +
Sbjct: 310 IGNLPHEVTQTELHRQFLALGVGVIEDVRVQRDKGFGFVRYRSHEEAALAIQLANGRVIC 369
Query: 338 GQNIRLSWGRSPS 350
G++I+ SWG P+
Sbjct: 370 GKSIKCSWGSKPT 382
>gi|194856103|ref|XP_001968677.1| GG24374 [Drosophila erecta]
gi|190660544|gb|EDV57736.1| GG24374 [Drosophila erecta]
Length = 336
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 12/178 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE V+++RNK TG+ GY F+ FIS A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGA---GEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG P+P N FRLN AS G +R+ +++VGDL++DV DY L + F ++
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE----FSVWVGDLSSDVDDYQLYKVFSSK 123
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
+ S K AKV++D L G +KGYGFVRFG E EQ A+ +MNG + T+P++I A K
Sbjct: 124 FTSIKTAKVILDSL-GFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK 180
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 31/212 (14%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L + +T+ + FR +++ ++ TG GY FV F + L AM +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 236 MNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNT---TVFVGNLDSIVTDEHL 292
+NG +P+ P TN ++ + + S P N +V+VG+L S V D L
Sbjct: 68 LNG-----KPI---PGTNPIV---RFRLNSASNSYKLPGNEREFSVWVGDLSSDVDDYQL 116
Query: 293 RELFS------QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSW 345
++FS + +++ + K GFV+F + AL +NG LG + I++
Sbjct: 117 YKVFSSKFTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKI-- 174
Query: 346 GRSPSNKQAQPDPNQWNAGYYGYAQGYENYGY 377
N +P NA A G NYGY
Sbjct: 175 ----CNAVPKPKSELGNA----LADGNTNYGY 198
>gi|299748443|ref|XP_001839126.2| RNA-binding protein Csx1 [Coprinopsis cinerea okayama7#130]
gi|298407975|gb|EAU82695.2| RNA-binding protein Csx1 [Coprinopsis cinerea okayama7#130]
Length = 808
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 107/218 (49%), Gaps = 46/218 (21%)
Query: 83 TLWIGDLQYWMDETYLN-TCFAHTGEVVAVKV-------IRNKQTGQIEGYGFIEFISRA 134
TLW GDL+ WMDE Y C + V +KV +Q GY F+ F S A
Sbjct: 92 TLWWGDLEVWMDEEYARQVCTLMGWDPVNIKVPHPAPDPATGQQPANNPGYCFLTFPSHA 151
Query: 135 GAERVLQTFN----GTPMPNGEQNFRLNWAS------------FGAGEKRDDTP------ 172
A VL N MPN + F LNWAS F G P
Sbjct: 152 HAAAVLAQINNAGKSVTMPNSSRPFVLNWASSVPASATGASASFSGGAYPSSAPQQPQYQ 211
Query: 173 -DHTIFVGDLAADVTDYMLQETFRA--------RYP-------STKGAKVVIDRLTGRTK 216
+++IFVGDLA + ++ L FR R P S K AK+++D +TG ++
Sbjct: 212 KEYSIFVGDLAPETSNSDLVAVFRNPVLGLRNDREPKYIRPFLSCKSAKIMLDPVTGVSR 271
Query: 217 GYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
GYGFVRF DE++Q RA+ EM+G++C +RPMRI PAT K
Sbjct: 272 GYGFVRFTDEADQQRALIEMHGLYCLSRPMRISPATAK 309
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 55/80 (68%)
Query: 269 SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEAL 328
+ DP NTTVFVG L ++++E LR F+ +G + +VK+P GK CGFVQF ++ AE A+
Sbjct: 489 TSTDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAI 548
Query: 329 RMLNGTQLGGQNIRLSWGRS 348
+ G +GG IRLSWGRS
Sbjct: 549 EKMQGFPIGGSKIRLSWGRS 568
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA G++ VKV K G F++F+ +A AER ++
Sbjct: 497 TVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCG------FVQFVRKADAERAIEK 550
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 551 MQGFPI--GGSKIRLSW 565
>gi|426253188|ref|XP_004020282.1| PREDICTED: nucleolysin TIAR isoform 3 [Ovis aries]
Length = 385
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 157/326 (48%), Gaps = 31/326 (9%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ GQP RTL++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 2 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYE 56
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-----------TIFVGDL 181
A L NG + E ++NWA+ + +K+D + + +FVGDL
Sbjct: 57 HRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSSKYFCCILRKSYHFHVFVGDL 114
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G +
Sbjct: 115 SPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWL 173
Query: 242 STRPMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRE 294
R +R AT K S Q + Q + P N TV+ G + S +TD+ +R+
Sbjct: 174 GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQ 233
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQ 353
FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP +
Sbjct: 234 TFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTK 293
Query: 354 A--QPDPNQWN--AGYYGYAQGYENY 375
Q D +QW + YG Q Y Y
Sbjct: 294 NFQQVDYSQWGQWSQVYGNPQQYGQY 319
>gi|403416664|emb|CCM03364.1| predicted protein [Fibroporia radiculosa]
Length = 948
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 112/217 (51%), Gaps = 45/217 (20%)
Query: 83 TLWIGDLQYWMDETYLN-TCFAHTGEVVAVKVIR---NKQTGQIE---GYGFIEFISRAG 135
TLW G+L+ WMDE Y C + V +KV R + TGQ GY F+ F S+A
Sbjct: 219 TLWWGELEPWMDEEYAKQVCNLMGWDPVNIKVPRPPPDTVTGQQANNPGYCFLTFPSQAH 278
Query: 136 AERVLQTFNGTP------MPNGEQNFRLNW-----------------ASFGAGEKRDDTP 172
A VL N + MPN + F LNW A+ G+
Sbjct: 279 AASVLSQINSSSNSPAMIMPNSSKPFSLNWTSSIPSPPVASALPGQTATLQTGQNPQYPK 338
Query: 173 DHTIFVGDLAADVTDYMLQETFRA--------RYP-------STKGAKVVIDRLTGRTKG 217
+++IFVGDLA +V++ L FR R P S K AK+++D +TG ++G
Sbjct: 339 EYSIFVGDLAPEVSNSDLVAVFRNPVLGLRNDREPRFIRPFLSCKSAKIMLDPVTGVSRG 398
Query: 218 YGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
YGFVRF DE++Q RA+ EM+G++C +RPMRI PAT K
Sbjct: 399 YGFVRFTDETDQQRALIEMHGLYCLSRPMRISPATAK 435
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 54/80 (67%)
Query: 269 SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEAL 328
+ DP NTTVFVG L ++++E LR F+ +G + +VK+P GK CGFVQF + AE A+
Sbjct: 607 TSSDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKPDAERAI 666
Query: 329 RMLNGTQLGGQNIRLSWGRS 348
+ G +GG IRLSWGRS
Sbjct: 667 EKMQGFPIGGSRIRLSWGRS 686
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA G++ VKV K GF++F+ + AER ++
Sbjct: 615 TVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHC------GFVQFVRKPDAERAIEK 668
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 669 MQGFPI--GGSRIRLSW 683
>gi|410298560|gb|JAA27880.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 388
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 155/317 (48%), Gaps = 32/317 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + +T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALA 66
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 67 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 124
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 125 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 183
Query: 251 ATNKKTVSASYQNSQVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
AT K S S Q D P+N TV+ G + S +T++ +R+ FS +GQ++
Sbjct: 184 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 243
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ-- 355
+++ K FV+F A A+ +NGT + G ++ WG+ +P +Q Q
Sbjct: 244 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIG 303
Query: 356 -PDP-NQWNAGYYGYAQ 370
P P QW +YG AQ
Sbjct: 304 YPQPYGQWGQ-WYGNAQ 319
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 8/184 (4%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMDVRTAGNDPYCFVEFHEHR 59
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
A+ MNG + +++ AT + +S V + ++ VFVG+L +
Sbjct: 60 HAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEI 119
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ I
Sbjct: 120 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 179
Query: 342 RLSW 345
R +W
Sbjct: 180 RTNW 183
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCA 324
+D T++VGNL VT+ + +LFSQ G + K+ R FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHA 61
Query: 325 EEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 62 AAALAAMNGRKIMGKEVKVNWATTPSSQK 90
>gi|195471272|ref|XP_002087929.1| GE14719 [Drosophila yakuba]
gi|194174030|gb|EDW87641.1| GE14719 [Drosophila yakuba]
Length = 338
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 12/178 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE V+++RNK TG+ GY F+ FIS A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGA---GEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG P+P N FRLN AS G +R+ +++VGDL++DV DY L + F ++
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE----FSVWVGDLSSDVDDYQLYKVFSSK 123
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
+ S K AKV++D L G +KGYGFVRFG E EQ A+ +MNG + T+P++I A K
Sbjct: 124 FTSIKTAKVILDSL-GFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK 180
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L + +T+ + FR +++ ++ TG GY FV F + L AM +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 236 MNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNT---TVFVGNLDSIVTDEHL 292
+NG +P+ P TN ++ + + S P N +V+VG+L S V D L
Sbjct: 68 LNG-----KPI---PGTNPIV---RFRLNSASNSYKLPGNEREFSVWVGDLSSDVDDYQL 116
Query: 293 RELFS------QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSW 345
++FS + +++ + K GFV+F + AL +NG LG + I++
Sbjct: 117 YKVFSSKFTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKI-- 174
Query: 346 GRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYA-------AAAPQDPSMYY 389
N +P NA +G NYGY+ A + D S YY
Sbjct: 175 ----CNAVPKPKSELGNA----LGEGSTNYGYSGSGSGATAGSGTDYSQYY 217
>gi|28574707|ref|NP_608837.2| CG15440 [Drosophila melanogaster]
gi|19528537|gb|AAL90383.1| RE72132p [Drosophila melanogaster]
gi|28380262|gb|AAF51009.2| CG15440 [Drosophila melanogaster]
gi|220948848|gb|ACL86967.1| CG15440-PA [synthetic construct]
gi|220958268|gb|ACL91677.1| CG15440-PA [synthetic construct]
Length = 336
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 12/178 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE V+++RNK TG+ GY F+ FIS A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGA---GEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG P+P N FRLN AS G +R+ +++VGDL++DV DY L + F ++
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE----FSVWVGDLSSDVDDYQLYKVFSSK 123
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
+ S K AKV++D L G +KGYGFVRFG E EQ A+ +MNG + T+P++I A K
Sbjct: 124 FTSIKTAKVILDSL-GFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK 180
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 100/228 (43%), Gaps = 35/228 (15%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L + +T+ + FR +++ ++ TG GY FV F + L AM +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 236 MNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNT---TVFVGNLDSIVTDEHL 292
+NG +P+ P TN ++ + + S P N +V+VG+L S V D L
Sbjct: 68 LNG-----KPI---PGTNPIV---RFRLNSASNSYKLPGNEREFSVWVGDLSSDVDDYQL 116
Query: 293 RELFS------QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSW 345
++FS + +++ + K GFV+F + AL +NG LG + I++
Sbjct: 117 YKVFSSKFTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKIC- 175
Query: 346 GRSPSNKQAQPDPNQWNAGYYGYAQGYENYGY----AAAAPQDPSMYY 389
A P P G G +G NYGY AA D S YY
Sbjct: 176 -------NAVPKPKSELGGAVG--EGNTNYGYGSGMTAAGGTDYSQYY 214
>gi|312371659|gb|EFR19788.1| hypothetical protein AND_21810 [Anopheles darlingi]
Length = 440
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 140/279 (50%), Gaps = 21/279 (7%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L T F+ G V + K+IR + Y FIE+ S A+ L
Sbjct: 8 KTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIREASN---DPYAFIEYASHTSAQTALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
N E ++NWA+ + + DT H IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRFFLKKE--IKVNWATSPGNQPKTDTSQHYHIFVGDLSPEIETETLREAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
++V D T +++GY FV F ++E A+ MNG + +R +R +T K A
Sbjct: 122 ISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKP--PAP 179
Query: 261 YQNSQVAQS-----------DDDPNNTTVFVGNLD-SIVTDEHLRELFSQYGQLVHVKIP 308
NS+ +S + P NTTV+ G + +TDE +++ F+Q+GQ+ ++
Sbjct: 180 RDNSKGIKSGKTPGFEEIYNNTSPTNTTVYCGGFPPNTITDELIQKHFAQFGQIHDTRVF 239
Query: 309 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
K F++FA++ A A+ + +++ G ++ WG+
Sbjct: 240 KDKGYAFIRFANKESAARAIEGTHNSEVQGHPVKCYWGK 278
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 277 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEALRMLNG 333
T++VGNLD+ VT+E L LFSQ G + KI + F+++A + A+ AL +N
Sbjct: 9 TLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIREASNDPYAFIEYASHTSAQTALAAMNK 68
Query: 334 TQLGGQNIRLSWGRSPSNKQAQPDPNQ 360
+ I+++W SP N Q + D +Q
Sbjct: 69 RFFLKKEIKVNWATSPGN-QPKTDTSQ 94
>gi|193636741|ref|XP_001950659.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Acyrthosiphon pisum]
Length = 348
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 121/227 (53%), Gaps = 21/227 (9%)
Query: 45 PPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQ---PGE-IRTLWIGDLQYWMDETYLNT 100
PP PP AT +P VPP QQ Q PG+ + +LW+G L+ +M E+++
Sbjct: 35 PPAYNVPPPTQTATTFISPN-----VPPVQQPQVSTPGQNVTSLWMGSLEPYMTESFITG 89
Query: 101 CFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMP--NGEQNFRL 157
F GE VK++RNK TG+ GY F++F ++ NG +P N F+L
Sbjct: 90 AFQKMGEYPKNVKLMRNKNTGETAGYAFVDFYDPVS---IMHKLNGKYIPGTNPPVRFKL 146
Query: 158 NWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKG 217
N A G+ D ++++G+L++DV DY L +TF RY S + AKVV+D G +KG
Sbjct: 147 NHAG-NPGKITTSDKDFSVWLGELSSDVDDYQLYKTFACRYQSIRTAKVVLDS-AGYSKG 204
Query: 218 YGFVRFGDESEQLRAMTEMNGV-FCSTRPMRIG---PATNKKTVSAS 260
YGF+RF E EQ + MNG T+P+++ P + + V AS
Sbjct: 205 YGFIRFSSEEEQKHCLNNMNGFPGLGTKPIKVSSVIPKSERHIVVAS 251
>gi|195576533|ref|XP_002078130.1| GD22708 [Drosophila simulans]
gi|194190139|gb|EDX03715.1| GD22708 [Drosophila simulans]
Length = 336
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 12/178 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE V+++RNK TG+ GY F+ FIS A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGA---GEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG P+P N FRLN AS G +R+ +++VGDL++DV DY L + F ++
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE----FSVWVGDLSSDVDDYQLYKVFSSK 123
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
+ S K AKV++D L G +KGYGFVRFG E EQ A+ +MNG + T+P++I A K
Sbjct: 124 FTSIKTAKVILDSL-GFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK 180
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 100/228 (43%), Gaps = 35/228 (15%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L + +T+ + FR +++ ++ TG GY FV F + L AM +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 236 MNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNT---TVFVGNLDSIVTDEHL 292
+NG +P+ P TN ++ + + S P N +V+VG+L S V D L
Sbjct: 68 LNG-----KPI---PGTNPIV---RFRLNSASNSYKLPGNEREFSVWVGDLSSDVDDYQL 116
Query: 293 RELFS------QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSW 345
++FS + +++ + K GFV+F + AL +NG LG + I++
Sbjct: 117 YKVFSSKFTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKIC- 175
Query: 346 GRSPSNKQAQPDPNQWNAGYYGYAQGYENYGY----AAAAPQDPSMYY 389
A P P G G +G NYGY AA D S YY
Sbjct: 176 -------NAVPKPKSELGGAVG--EGSTNYGYGSGVTAAGGTDYSQYY 214
>gi|195159506|ref|XP_002020619.1| GL15405 [Drosophila persimilis]
gi|198475233|ref|XP_001356977.2| GA13731 [Drosophila pseudoobscura pseudoobscura]
gi|194117569|gb|EDW39612.1| GL15405 [Drosophila persimilis]
gi|198138730|gb|EAL34043.2| GA13731 [Drosophila pseudoobscura pseudoobscura]
Length = 339
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 105/178 (58%), Gaps = 12/178 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE V+++RNK TG+ GY F+ FIS A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGA---GEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG P+P N FRLN AS G +R+ +++VGDL++DV DY L + F ++
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE----FSVWVGDLSSDVDDYQLYKIFSSK 123
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNK 254
+ S K AKV++D L G +KGYGFVRFG E EQ A+ +MNG T+P++I A K
Sbjct: 124 FTSIKTAKVILDSL-GFSKGYGFVRFGIEDEQKSALYDMNGFIGLGTKPIKICNAVPK 180
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L + +T+ + FR +++ ++ TG GY FV F + L AM +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 236 MNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNT---TVFVGNLDSIVTDEHL 292
+NG +P+ P TN ++ + + S P N +V+VG+L S V D L
Sbjct: 68 LNG-----KPI---PGTNPIV---RFRLNSASNSYKLPGNEREFSVWVGDLSSDVDDYQL 116
Query: 293 RELFS------QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSW 345
++FS + +++ + K GFV+F + AL +NG LG + I++
Sbjct: 117 YKIFSSKFTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKSALYDMNGFIGLGTKPIKIC- 175
Query: 346 GRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAA-------AAPQDPSMYY 389
A P P G G NYGY+ AA D S YY
Sbjct: 176 -------NAVPKPKSELGAALG-VSGSTNYGYSGAGGTSSPAAGADYSQYY 218
>gi|389612022|dbj|BAM19544.1| tRNA selenocysteine associated protein secp43, partial [Papilio
xuthus]
Length = 295
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 5/196 (2%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ M E+++ F G+ + VKV+RNK TG+ GY F+ F + A +
Sbjct: 7 LWMGSLEPNMTESFIMAAFHRMGQRPLTVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 66
Query: 143 FNGTPMPNG--EQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG P+P FRLN AS A + +++VGDL+ DV DY L F ++Y S
Sbjct: 67 LNGKPIPGTFPVVRFRLNTASREARSNLQQEREFSVWVGDLSPDVDDYSLYRVFASKYSS 126
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNKKTVSA 259
K AKV++D TG TKGYGFVRFG+E EQ A+ MNG T+P++I A K
Sbjct: 127 IKTAKVILDG-TGYTKGYGFVRFGNEEEQRNALYAMNGYSGLGTKPLKICTAVPKPKGVT 185
Query: 260 SYQNSQVAQSDDDPNN 275
+ QNS + + + N
Sbjct: 186 TNQNSTTSVTSNAAYN 201
>gi|297687495|ref|XP_002821248.1| PREDICTED: nucleolysin TIAR isoform 3 [Pongo abelii]
Length = 386
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 142/283 (50%), Gaps = 16/283 (5%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ GQP RTL++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYE 57
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQ 191
A L NG + E ++NWA+ + +K+ +H +FVGDL+ ++T ++
Sbjct: 58 HRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKILPVNHFHVFVGDLSPEITTEDIK 115
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +R A
Sbjct: 116 SAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 174
Query: 252 TNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 304
T K S Q + Q + P N TV+ G + S +TD+ +R+ FS +GQ++
Sbjct: 175 TRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIME 234
Query: 305 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
+++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 235 IRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 277
>gi|195342467|ref|XP_002037822.1| GM18090 [Drosophila sechellia]
gi|194132672|gb|EDW54240.1| GM18090 [Drosophila sechellia]
Length = 336
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 12/178 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE V+++RNK TG+ GY F+ FIS A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGA---GEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG P+P N FRLN AS G +R+ +++VGDL++DV DY L + F ++
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE----FSVWVGDLSSDVDDYQLYKVFSSK 123
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
+ S K AKV++D L G +KGYGFVRFG E EQ A+ +MNG + T+P++I A K
Sbjct: 124 FTSIKTAKVILDSL-GFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK 180
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 100/228 (43%), Gaps = 35/228 (15%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L + +T+ + FR +++ ++ TG GY FV F + L AM +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 236 MNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNT---TVFVGNLDSIVTDEHL 292
+NG +P+ P TN ++ + + S P N +V+VG+L S V D L
Sbjct: 68 LNG-----KPI---PGTNPIV---RFRLNSASNSYKLPGNEREFSVWVGDLSSDVDDYQL 116
Query: 293 RELFS------QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSW 345
++FS + +++ + K GFV+F + AL +NG LG + I++
Sbjct: 117 YKVFSSKFTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKIC- 175
Query: 346 GRSPSNKQAQPDPNQWNAGYYGYAQGYENYGY----AAAAPQDPSMYY 389
A P P G G +G NYGY AA D S YY
Sbjct: 176 -------NAVPKPKSELGGAVG--EGSTNYGYGSGVTAAGGTDYSQYY 214
>gi|395742091|ref|XP_003777693.1| PREDICTED: nucleolysin TIAR [Pongo abelii]
Length = 386
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 158/326 (48%), Gaps = 31/326 (9%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ GQP RTL++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYE 57
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRD---DTP-------DH-TIFVGDL 181
A L NG + E ++NWA+ + +K+ TP DH +FVGDL
Sbjct: 58 HRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKILPVSTPVPNALISDHFHVFVGDL 115
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G +
Sbjct: 116 SPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWL 174
Query: 242 STRPMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRE 294
R +R AT K S Q + Q + P N TV+ G + S +TD+ +R+
Sbjct: 175 GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQ 234
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQ 353
FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP +
Sbjct: 235 TFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTK 294
Query: 354 A--QPDPNQWN--AGYYGYAQGYENY 375
Q D +QW + YG Q Y Y
Sbjct: 295 NFQQVDYSQWGQWSQVYGNPQQYGQY 320
>gi|268533576|ref|XP_002631916.1| Hypothetical protein CBG07904 [Caenorhabditis briggsae]
Length = 411
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 139/293 (47%), Gaps = 40/293 (13%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + + +L T F G V KV + G + + FIEF A + LQ
Sbjct: 37 RTLFVGNLDPAITDEFLATLFNQIGAVTKAKVCFD---GMNDPFAFIEFGDHNQAGQALQ 93
Query: 142 TFNGTPMPNGEQNFRLNWASF----GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG + + E R+NWA G K++ + +FVGDL+++V L+E F A
Sbjct: 94 AMNGRSLLDRE--MRVNWAVDASQPGDSRKQETSRHFHVFVGDLSSEVDSTKLREAFLA- 150
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--- 254
+ AK++ D T + KGYGFV + + RA+ +MNG + R +R AT K
Sbjct: 151 FGDVSEAKIIRDTATNKAKGYGFVSYPRREDAERAIEQMNGQWLGRRTIRTNWATRKPEE 210
Query: 255 -------------------KTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 295
KT Y + +NT+V+VG ++ + DE +R
Sbjct: 211 EGGGERRDRGERGERRHYEKTFDEIYNQTSA-------DNTSVYVGQINQLTEDE-IRRA 262
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
F ++G + V++ + FV+F + A A+ +N ++ GQ +R SWG+S
Sbjct: 263 FDRFGPINEVRMFKVQGYAFVKFEQKEAAARAIVQMNNAEIQGQQVRCSWGKS 315
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 83/195 (42%), Gaps = 44/195 (22%)
Query: 77 QPGEIRT--------LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
QPG+ R +++GDL +D T L F G+V K+IR+ T + +GYGF+
Sbjct: 115 QPGDSRKQETSRHFHVFVGDLSSEVDSTKLREAFLAFGDVSEAKIIRDTATNKAKGYGFV 174
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA--------------------------SF 162
+ R AER ++ NG + G + R NWA +F
Sbjct: 175 SYPRREDAERAIEQMNGQWL--GRRTIRTNWATRKPEEEGGGERRDRGERGERRHYEKTF 232
Query: 163 GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVR 222
+ + +++VG + +T+ ++ F R+ ++ + +GY FV+
Sbjct: 233 DEIYNQTSADNTSVYVGQI-NQLTEDEIRRAF-DRFGPINEVRMF------KVQGYAFVK 284
Query: 223 FGDESEQLRAMTEMN 237
F + RA+ +MN
Sbjct: 285 FEQKEAAARAIVQMN 299
>gi|426223382|ref|XP_004005854.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Ovis aries]
gi|440907815|gb|ELR57912.1| Nucleolysin TIA-1 isoform p40 [Bos grunniens mutus]
Length = 386
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 162/351 (46%), Gaps = 42/351 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSASYQNSQVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
AT K S S Q D P+N TV+ G + S +T++ +R+ FS +GQ++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQPD 357
+++ K FV+F A A+ +NGT + G ++ WG+ +P +Q Q
Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQ-- 299
Query: 358 PNQWNAGYYGYAQGYENYGYAAAAPQDPSMYY-GGY--PGYGNYQQPQQPQ 405
GY Q Y +G Q Y G+ P YG Y QP Q
Sbjct: 300 --------IGYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQPWNQQ 342
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 90/183 (49%), Gaps = 9/183 (4%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
+D T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFYEHRH 58
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ MNG + +++ AT + +S V + ++ VFVG+L +T
Sbjct: 59 AAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEIT 118
Query: 289 DEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ IR
Sbjct: 119 TEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIR 178
Query: 343 LSW 345
+W
Sbjct: 179 TNW 181
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|26390405|dbj|BAC25892.1| unnamed protein product [Mus musculus]
Length = 358
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 144/295 (48%), Gaps = 23/295 (7%)
Query: 93 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE 152
+ E + F+ G K+I + T + Y F+EF A L NG + E
Sbjct: 1 VTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKE 58
Query: 153 QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLT 212
++NWA+ + +K+D + +FVGDL+ ++T ++ F A + A+VV D T
Sbjct: 59 --VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRISDARVVKDMAT 115
Query: 213 GRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQ---- 268
G++KGYGFV F ++ + A+ +M G + R +R AT K S S Q
Sbjct: 116 GKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYD 175
Query: 269 ---SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAE 325
S PNN TV+ G + S +T++ +R+ FS +GQ++ +++ K FV+F+ A
Sbjct: 176 EVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAA 235
Query: 326 EALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ----PDPNQWNAGYYGYAQ 370
A+ +NGT + G ++ WG+ +P +Q Q P QW +YG AQ
Sbjct: 236 HAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPPTYGQWGQ-WYGNAQ 289
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 65 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 124
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 125 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSS 182
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 183 PNNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFSSHESAA 235
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 236 HAIVSVNGT 244
>gi|395329881|gb|EJF62266.1| hypothetical protein DICSQDRAFT_135856 [Dichomitus squalens
LYAD-421 SS1]
Length = 973
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 135/270 (50%), Gaps = 65/270 (24%)
Query: 31 QQPPPQ--PSPYMMMMPP-QPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIG 87
Q+P PQ SP + +PP QPQ+ P AT ++P+ TLW G
Sbjct: 195 QRPHPQQSSSPLSVQLPPAQPQSLPSPSTAT--SSPRT-----------------TLWWG 235
Query: 88 DLQYWMDETYLN-TCFAHTGEVVAVKVIR---NKQTGQIE---GYGFIEFISRAGAERVL 140
+L+ WMDE Y C + +++KV R + TGQ GY F+ F ++A A VL
Sbjct: 236 ELEPWMDEEYAKQVCNLMGWDPISIKVPRPAPDPITGQQANNPGYCFLTFSTQAQAASVL 295
Query: 141 QTFNGTP----MPNGEQNFRLNWAS-FGAGEKRDDTP----------------DHTIFVG 179
N + MPN + F LNWAS + P +++IFVG
Sbjct: 296 SQVNNSSSPMIMPNSSKPFSLNWASSIPSAPLSTSIPGQTISIPGVQNPQYPKEYSIFVG 355
Query: 180 DLAADVTDYMLQETFRA--------RYP-------STKGAKVVIDRLTGRTKGYGFVRFG 224
DLA +V++ L FR R P S K AK+++D +TG ++GYGFVRF
Sbjct: 356 DLAPEVSNSDLVAVFRNPVLGLRNDREPRFIRPFLSCKSAKIMLDPVTGVSRGYGFVRFT 415
Query: 225 DESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
DE++Q RA+ EM+G++C +RPMRI PAT K
Sbjct: 416 DEADQQRALIEMHGLYCLSRPMRISPATAK 445
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 55/80 (68%)
Query: 269 SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEAL 328
+ DP NTTVFVG L +++++ LR F+ +G++ +VK+P GK CGFVQF + AE A+
Sbjct: 621 TSSDPYNTTVFVGGLSPLISEDTLRTFFAPFGEIHYVKVPVGKHCGFVQFVRKPDAERAI 680
Query: 329 RMLNGTQLGGQNIRLSWGRS 348
+ G +GG IRLSWGRS
Sbjct: 681 EKMQGFPIGGSRIRLSWGRS 700
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA GE+ VKV K GF++F+ + AER ++
Sbjct: 629 TVFVGGLSPLISEDTLRTFFAPFGEIHYVKVPVGKHC------GFVQFVRKPDAERAIEK 682
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 683 MQGFPI--GGSRIRLSW 697
>gi|115497910|ref|NP_001069577.1| nucleolysin TIA-1 isoform p40 [Bos taurus]
gi|111308630|gb|AAI20428.1| TIA1 cytotoxic granule-associated RNA binding protein [Bos taurus]
gi|296482421|tpg|DAA24536.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein [Bos
taurus]
Length = 384
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 162/351 (46%), Gaps = 42/351 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSASYQNSQVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
AT K S S Q D P+N TV+ G + S +T++ +R+ FS +GQ++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQPD 357
+++ K FV+F A A+ +NGT + G ++ WG+ +P +Q Q
Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQ-- 299
Query: 358 PNQWNAGYYGYAQGYENYGYAAAAPQDPSMYY-GGY--PGYGNYQQPQQPQ 405
GY Q Y +G Q Y G+ P YG Y QP Q
Sbjct: 300 --------IGYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQPWNQQ 342
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 90/183 (49%), Gaps = 9/183 (4%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
+D T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFYEHRH 58
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ MNG + +++ AT + +S V + ++ VFVG+L +T
Sbjct: 59 AAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEIT 118
Query: 289 DEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ IR
Sbjct: 119 TEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIR 178
Query: 343 LSW 345
+W
Sbjct: 179 TNW 181
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|348566571|ref|XP_003469075.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Cavia porcellus]
Length = 388
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 161/347 (46%), Gaps = 42/347 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
AT K S S Q S P+N TV+ G + S +T++ +R+ FS +GQ++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQPD 357
+++ K FV+F A A+ +NGT + G ++ WG+ +P +Q Q
Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQ-- 299
Query: 358 PNQWNAGYYGYAQGYENYGYAAAAPQDPSMYY-GGY--PGYGNYQQP 401
GY Q Y +G Q Y G+ P YG Y QP
Sbjct: 300 --------IGYPQPYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQP 338
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 10/184 (5%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
A+ MNG + +++ AT + +S V + ++ VFVG+L +
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEI 117
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ I
Sbjct: 118 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 177
Query: 342 RLSW 345
R +W
Sbjct: 178 RTNW 181
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|27924240|gb|AAH45086.1| Tia1 protein, partial [Xenopus laevis]
Length = 427
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 161/347 (46%), Gaps = 37/347 (10%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG-------- 124
+ GQP RTL++G+L + E + F+ G + K+I + G+ G
Sbjct: 40 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDGRRVGASVSFPVM 96
Query: 125 -------YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIF 177
Y F+EF A L NG + E ++NWA+ + +K+D + +F
Sbjct: 97 PNANNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVF 154
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDL+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M
Sbjct: 155 VGDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMG 213
Query: 238 GVFCSTRPMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDE 290
G + R +R AT K S Q + Q + N TV+ G + + ++++
Sbjct: 214 GQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSSKNCTVYCGGIGAGLSEQ 273
Query: 291 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP- 349
+R+ F +GQ++ +++ K F++F+ A A+ +NGT + G ++ WG+
Sbjct: 274 LMRQTFGVFGQILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNGTTIEGHVVKCYWGKETP 333
Query: 350 --SNKQAQPDPNQWN--AGYYGYAQGYENYGYAAAAPQDPSMYYGGY 392
+ Q D +QW + YG Q Y Y A Q PS YG Y
Sbjct: 334 DMTKNFQQVDYSQWGQWSQMYGSPQQYGQ--YVANGWQVPS--YGMY 376
>gi|297738530|emb|CBI27775.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 148/285 (51%), Gaps = 32/285 (11%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + E L F+ TG + K+IR +++ YGF+++ R A +
Sbjct: 53 CRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKSS----YGFVDYFDRRSAALSI 108
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
T NG + Q ++NWA A +R+DT H IFVGDL+ +VTD L F YP
Sbjct: 109 VTLNGRHLFG--QPIKVNWAY--ASSQREDTSGHYNIFVGDLSPEVTDATLFACFSV-YP 163
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG---------- 249
S A+V+ D+ TGR++G+GFV F ++ E A+ ++NG + +R +R
Sbjct: 164 SCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGRWLGSRQIRCNWATKGAGGNE 223
Query: 250 --PATNKKTV----SASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQY 299
P ++ K+V + + ++ + +D+ P N TTV+VGNL VT L F
Sbjct: 224 DKPNSDAKSVVELTNGTSEDGKDKSNDEAPENNLQYTTVYVGNLAPEVTSVDLHRHFHAL 283
Query: 300 --GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
G + V++ K GFV+++ + A A++M N L G+ I+
Sbjct: 284 GAGAIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARILCGKPIK 328
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 39/210 (18%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL + + L CF+ +V+ +++TG+ G+GF+ F ++ A+ +
Sbjct: 141 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDL 200
Query: 144 NGTPMPNGEQNFRLNWASFGAG--------------------------EKRDDTPDH--- 174
NG + G + R NWA+ GAG + D+ P++
Sbjct: 201 NGRWL--GSRQIRCNWATKGAGGNEDKPNSDAKSVVELTNGTSEDGKDKSNDEAPENNLQ 258
Query: 175 --TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
T++VG+LA +VT L F A GA + D R KG+GFVR+ +E A
Sbjct: 259 YTTVYVGNLAPEVTSVDLHRHFHAL-----GAGAIEDVRVQRDKGFGFVRYSTHAEAALA 313
Query: 233 MTEMNGVFCSTRPMRIG-PATNKKTVSASY 261
+ N +P++ G P +KT + Y
Sbjct: 314 IQMGNARILCGKPIKKGCPRLRQKTTPSLY 343
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 23/183 (12%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VT+ +LQE F + P +G K++ YGFV + D
Sbjct: 49 DSSTCRSVYVGNIHPQVTEPLLQEVFSSTGP-LEGCKLI----RKEKSSYGFVDYFDRRS 103
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
++ +NG +P+++ A Y +SQ +D + +FVG+L VT
Sbjct: 104 AALSIVTLNGRHLFGQPIKVNWA---------YASSQ---REDTSGHYNIFVGDLSPEVT 151
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ ++ G FV F ++ A+ A+ LNG LG + IR
Sbjct: 152 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGRWLGSRQIR 211
Query: 343 LSW 345
+W
Sbjct: 212 CNW 214
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--GFVQFADRSCAEEAL 328
D +V+VGN+ VT+ L+E+FS G L K+ ++ GFV + DR A ++
Sbjct: 49 DSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKSSYGFVDYFDRRSAALSI 108
Query: 329 RMLNGTQLGGQNIRLSWGRSPSNKQ 353
LNG L GQ I+++W + S ++
Sbjct: 109 VTLNGRHLFGQPIKVNWAYASSQRE 133
>gi|410922589|ref|XP_003974765.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 386
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 139/275 (50%), Gaps = 16/275 (5%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E + F G + K+I + T + Y F+EF A L
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVD--TAGNDPYCFVEFYEHRHAAASLA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ +K+D + +FVGDL+ ++T ++ F +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTDDVKAAF-GPFGRI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----KTV 257
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K KT
Sbjct: 122 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKTT 181
Query: 258 SASYQNSQVAQSDD-----DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 312
S NS+ DD P+N TV+ G + + +T++ +R+ FS +G ++ +++ K
Sbjct: 182 YES--NSKQLCFDDVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGPIMEIRVFPDKG 239
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
FV+F A A+ +NG+ + G ++ WG+
Sbjct: 240 YSFVRFNSHESAAHAIVSVNGSSIEGHVVKCYWGK 274
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 21/184 (11%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
DD P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDDQP-RTLYVGNLSRDVTEPLILQVFTQIGPC-KSCKMIVD--TAGNDPYCFVEFYEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
++ MNG + +++ AT + +Q D N+ VFVG+L +
Sbjct: 58 HAAASLAAMNGRKIMGKEVKVNWAT-----------TPTSQKKDTSNHFHVFVGDLSPEI 106
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T + ++ F +G++ ++ K GFV F ++ AE A++ + G LGG+ I
Sbjct: 107 TTDDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 166
Query: 342 RLSW 345
R +W
Sbjct: 167 RTNW 170
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + F G + +V+++ TG+ +GYGF+
Sbjct: 82 TTPTSQKKDTSNHFHVFVGDLSPEITTDDVKAAFGPFGRISDARVVKDMATGKSKGYGFV 141
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA---------SFGAGEKR---DDTPDH-- 174
F ++ AE +Q G + G + R NWA ++ + K+ DD +
Sbjct: 142 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKTTYESNSKQLCFDDVVNQSS 199
Query: 175 ----TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
T++ G ++ +T+ ++++TF P +++ KGY FVRF
Sbjct: 200 PSNCTVYCGGVSTGLTEQLMRQTFSPFGP-------IMEIRVFPDKGYSFVRFNSHESAA 252
Query: 231 RAMTEMNG 238
A+ +NG
Sbjct: 253 HAIVSVNG 260
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 270 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCA 324
DD P T++VGNL VT+ + ++F+Q G K+ AG C FV+F + A
Sbjct: 3 DDQPR--TLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYC-FVEFYEHRHA 59
Query: 325 EEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
+L +NG ++ G+ ++++W +P++++
Sbjct: 60 AASLAAMNGRKIMGKEVKVNWATTPTSQK 88
>gi|387017380|gb|AFJ50808.1| Nucleolysin TIAR [Crotalus adamanteus]
Length = 388
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 153/330 (46%), Gaps = 33/330 (10%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK--------------- 117
+ GQP +TL++G+L + E + F+ G + K+I +
Sbjct: 2 EDDGQP---KTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVL 58
Query: 118 QTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIF 177
Q + Y F+EF A L NG + E ++NWA+ + +K+D + +F
Sbjct: 59 QHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVF 116
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDL+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M
Sbjct: 117 VGDLSPEITTEDIKSAF-APFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMG 175
Query: 238 GVFCSTRPMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDE 290
G + R +R AT K S Q + Q + P N TV+ G + S +TD+
Sbjct: 176 GQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQ 235
Query: 291 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
+R+ FS +GQ+V + K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 236 LMRQTFSPFGQIVETRAFPVKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKETP 295
Query: 351 NKQA---QPDPNQWN--AGYYGYAQGYENY 375
+ Q + +QW + YG Q Y Y
Sbjct: 296 DTTKDFQQVEYSQWGQWSQVYGNPQQYGQY 325
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 100 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMTTGKSKGYGFV 159
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 160 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 217
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 218 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IVETRAFPVKGYSFVRFSTHESAA 270
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 271 HAIVSVNGT 279
>gi|16215606|emb|CAC95018.1| TIA-1 protein [Xenopus laevis]
Length = 388
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 142/284 (50%), Gaps = 23/284 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G + K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMD--TAGNDPYCFVEFFEHRHAAASLA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRD----------DTPDH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ +++ +
Sbjct: 65 AINGRKILGKE--VKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEISTDDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
AT K S S Q + P+N TV+ G + S ++++ +R+ FS +GQ++
Sbjct: 182 ATRKPPAPKSTFESNAKQLTYEEVVNQSSPSNCTVYCGGVTSGLSEQLMRQTFSPFGQIM 241
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
V++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 242 EVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGK 285
>gi|149036617|gb|EDL91235.1| rCG56007, isoform CRA_a [Rattus norvegicus]
Length = 386
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 153/317 (48%), Gaps = 34/317 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
AT K S S Q S P N TV+ G + S +T++ +R+ FS +GQ++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVSQSSPGNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ-- 355
+++ K F++F+ A A+ +NGT + G ++ WG+ +P +Q Q
Sbjct: 242 EIRVFPDKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIG 301
Query: 356 --PDPNQWNAGYYGYAQ 370
P QW +YG AQ
Sbjct: 302 YPPAYGQWGQ-WYGNAQ 317
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 10/184 (5%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
A+ MNG + +++ AT + +S V + ++ VFVG+L +
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEI 117
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ I
Sbjct: 118 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 177
Query: 342 RLSW 345
R +W
Sbjct: 178 RTNW 181
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|112983244|ref|NP_001037608.1| tRNA selenocysteine 1-associated protein 1 [Bombyx mori]
gi|102269199|gb|ABF55965.2| CG15440-like protein [Bombyx mori]
Length = 214
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 102/176 (57%), Gaps = 7/176 (3%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ M E+++ F G+ +AVKV+RNK TG+ GY F+ F + A +
Sbjct: 12 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 71
Query: 143 FNGTPMPNG--EQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG P+P FRLN AS + +++VGDL+ DV DY L F ++Y S
Sbjct: 72 LNGKPIPGTFPVVRFRLNTASRETRANMQHEREFSVWVGDLSPDVDDYSLYRVFASKYTS 131
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC--STRPMRIGPATNK 254
K AKV++D +G TKGYGFVRFG+E EQ A+ MNG +C T+P++I A K
Sbjct: 132 IKTAKVILDN-SGYTKGYGFVRFGNEDEQRNALYAMNG-YCGLGTKPLKICTAVPK 185
>gi|45184976|ref|NP_982694.1| AAR151Wp [Ashbya gossypii ATCC 10895]
gi|44980597|gb|AAS50518.1| AAR151Wp [Ashbya gossypii ATCC 10895]
Length = 481
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 113/226 (50%), Gaps = 52/226 (23%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ----------------------- 118
RTLW+GDL DE + + G V VK+IR K+
Sbjct: 22 RTLWMGDLDPSFDEATIQHVWLTVGHQVQVKLIRAKKNLLIPCSTSSTLSASHVDEERIQ 81
Query: 119 ----------TGQIE--GYGFIEFISRAGAERVLQTFNGTPMPN-------------GEQ 153
T Q+ GY F++F + A+ LQ N TP+PN G++
Sbjct: 82 INGVSFIDPNTTQLHHAGYCFVQFANLQEAQAGLQ-LNATPLPNVVSPTTRNPTNPTGKR 140
Query: 154 NFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRL 211
NFRLNWAS GA + D TP+ ++FVGDL+ T+ L F+ ++ S K +V+ D +
Sbjct: 141 NFRLNWAS-GATLQSDIPATPEFSLFVGDLSPTATEAHLLSLFQTKFKSVKTVRVMTDPI 199
Query: 212 TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
TG ++ +GFVRF DE E+ RA+ EMNGV+C R +R+ AT + +
Sbjct: 200 TGASRCFGFVRFADEKERRRALAEMNGVWCQGRQLRVAYATPRNNL 245
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 53/77 (68%)
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
D NTTVF+G L +++++ L LF +G ++ VK+P G+ CGFV+F +R AE A++ +
Sbjct: 322 DTANTTVFIGGLSNMISEGQLHALFMPFGNILSVKVPPGRGCGFVRFENRMDAEAAIQGM 381
Query: 332 NGTQLGGQNIRLSWGRS 348
G +GG IRLSWGR+
Sbjct: 382 QGFIVGGNAIRLSWGRT 398
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 20/151 (13%)
Query: 217 GYGFVRFGDESE-----QLRAMTEMNGVFCSTRPMRIGPA--TNKKTVSASYQNSQVAQS 269
GY FV+F + E QL A N V +TR P T K+ ++ + QS
Sbjct: 99 GYCFVQFANLQEAQAGLQLNATPLPNVVSPTTR----NPTNPTGKRNFRLNWASGATLQS 154
Query: 270 DDDPN-NTTVFVGNLDSIVTDEHLRELF-SQYGQLVHVK-----IPAGKRC-GFVQFADR 321
D ++FVG+L T+ HL LF +++ + V+ I RC GFV+FAD
Sbjct: 155 DIPATPEFSLFVGDLSPTATEAHLLSLFQTKFKSVKTVRVMTDPITGASRCFGFVRFADE 214
Query: 322 SCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
AL +NG G+ +R+++ +P N
Sbjct: 215 KERRRALAEMNGVWCQGRQLRVAYA-TPRNN 244
>gi|374105894|gb|AEY94805.1| FAAR151Wp [Ashbya gossypii FDAG1]
Length = 475
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 113/226 (50%), Gaps = 52/226 (23%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ----------------------- 118
RTLW+GDL DE + + G V VK+IR K+
Sbjct: 22 RTLWMGDLDPSFDEATIQHVWLTVGHQVQVKLIRAKKNLLIPCSTSSTLSASHVDEERIQ 81
Query: 119 ----------TGQIE--GYGFIEFISRAGAERVLQTFNGTPMPN-------------GEQ 153
T Q+ GY F++F + A+ LQ N TP+PN G++
Sbjct: 82 INGVSFIDPNTTQLHHAGYCFVQFANLQEAQAGLQ-LNATPLPNVVSPTTRNPTNPTGKR 140
Query: 154 NFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRL 211
NFRLNWAS GA + D TP+ ++FVGDL+ T+ L F+ ++ S K +V+ D +
Sbjct: 141 NFRLNWAS-GATLQSDIPATPEFSLFVGDLSPTATEAHLLSLFQTKFKSVKTVRVMTDPI 199
Query: 212 TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
TG ++ +GFVRF DE E+ RA+ EMNGV+C R +R+ AT + +
Sbjct: 200 TGASRCFGFVRFADEKERRRALAEMNGVWCQGRQLRVAYATPRNNL 245
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 53/77 (68%)
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
D NTTVF+G L +++++ L LF +G ++ VK+P G+ CGFV+F +R AE A++ +
Sbjct: 322 DTANTTVFIGGLSNMISEGQLHALFMPFGNILSVKVPPGRGCGFVRFENRMDAEAAIQGM 381
Query: 332 NGTQLGGQNIRLSWGRS 348
G +GG IRLSWGR+
Sbjct: 382 QGFIVGGNAIRLSWGRT 398
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 20/151 (13%)
Query: 217 GYGFVRFGDESE-----QLRAMTEMNGVFCSTRPMRIGPA--TNKKTVSASYQNSQVAQS 269
GY FV+F + E QL A N V +TR P T K+ ++ + QS
Sbjct: 99 GYCFVQFANLQEAQAGLQLNATPLPNVVSPTTR----NPTNPTGKRNFRLNWASGATLQS 154
Query: 270 DDDPN-NTTVFVGNLDSIVTDEHLRELF-SQYGQLVHVK-----IPAGKRC-GFVQFADR 321
D ++FVG+L T+ HL LF +++ + V+ I RC GFV+FAD
Sbjct: 155 DIPATPEFSLFVGDLSPTATEAHLLSLFQTKFKSVKTVRVMTDPITGASRCFGFVRFADE 214
Query: 322 SCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
AL +NG G+ +R+++ +P N
Sbjct: 215 KERRRALAEMNGVWCQGRQLRVAYA-TPRNN 244
>gi|195035701|ref|XP_001989310.1| GH11659 [Drosophila grimshawi]
gi|193905310|gb|EDW04177.1| GH11659 [Drosophila grimshawi]
Length = 364
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 104/178 (58%), Gaps = 12/178 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE V+++RNK TG+ GY F+ FIS A +
Sbjct: 8 LWMGSLEPYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGA---GEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG +P N FRLN AS G +R+ +++VGDL +DV DY L + F ++
Sbjct: 68 LNGKHIPGTNPIVRFRLNSASNSFKLPGNERE----FSVWVGDLTSDVDDYSLYKVFSSK 123
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
Y S K AKV++D L G +KGYGFVRFG E EQ A+ +MNG V T+P++I A K
Sbjct: 124 YTSIKTAKVILDSL-GFSKGYGFVRFGIEDEQKSALYDMNGYVGLGTKPIKICNAVPK 180
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L +T+ + FR +++ ++ TG GY FV F + L AM +
Sbjct: 8 LWMGSLEPYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 236 MNGVFC-STRPM---RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEH 291
+NG T P+ R+ A+N + + +V+VG+L S V D
Sbjct: 68 LNGKHIPGTNPIVRFRLNSASNSFKLPG------------NEREFSVWVGDLTSDVDDYS 115
Query: 292 LRELF-SQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
L ++F S+Y + K+ K GFV+F + AL +NG LG + I++
Sbjct: 116 LYKVFSSKYTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKSALYDMNGYVGLGTKPIKIC 175
Query: 345 WGRSPSNKQAQPDPN-QWNAGYYGYAQGYENYGY 377
A P P + NA G NYGY
Sbjct: 176 --------NAVPKPKAELNA---ALGNGSNNYGY 198
>gi|346972032|gb|EGY15484.1| nucleolysin TIA-1 [Verticillium dahliae VdLs.17]
Length = 489
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 120/249 (48%), Gaps = 29/249 (11%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAA 183
YGF+E+ AER +QT NG + E R+NWA ++DT +H IFVGDL+
Sbjct: 138 YGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNTTSKEDTSNHFHIFVGDLSN 195
Query: 184 DVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST 243
+V D +L + F A + S A+V+ D TGR++GYGFV F D + +A++ M+G + +
Sbjct: 196 EVNDEILSQAFAA-FGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGS 254
Query: 244 RPMRIGPATNKKTVSASYQNSQVAQS------------------------DDDPN-NTTV 278
R +R A K S + Q + A PN TTV
Sbjct: 255 RAIRCNWANQKGQPSIAQQQAMQAMGMTPTTPFGHHQFPAHGMASYEVILAQTPNWQTTV 314
Query: 279 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 338
+VGNL T + LF +G +V + A + F++ A A+ +NG + G
Sbjct: 315 YVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMESHEAAAMAICQMNGYNVNG 374
Query: 339 QNIRLSWGR 347
+ ++ SWG+
Sbjct: 375 RPLKCSWGK 383
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 86/212 (40%), Gaps = 45/212 (21%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL +++ L+ FA G V +V+ + +TG+ GYGF+ F R AE+ L +
Sbjct: 188 IFVGDLSNEVNDEILSQAFAAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSM 247
Query: 144 NGTPMPNGEQNFRLNWAS-----------------------FGAGE-----------KRD 169
+G + G + R NWA+ FG +
Sbjct: 248 DGEWL--GSRAIRCNWANQKGQPSIAQQQAMQAMGMTPTTPFGHHQFPAHGMASYEVILA 305
Query: 170 DTPD--HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
TP+ T++VG+L T + F + V++ +G+ F++
Sbjct: 306 QTPNWQTTVYVGNLTPYTTPNDVVPLF-------QNFGFVVESRFQADRGFAFIKMESHE 358
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
A+ +MNG + RP++ +K +A
Sbjct: 359 AAAMAICQMNGYNVNGRPLKCSWGKDKTPNAA 390
>gi|413918499|gb|AFW58431.1| hypothetical protein ZEAMMB73_000058 [Zea mays]
Length = 175
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 98/149 (65%), Gaps = 7/149 (4%)
Query: 255 KTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
K +++ +S SD D +N TV+VG LD V+++ LR+ F++Y L VKIP GK+CG
Sbjct: 27 KFLNSDSGSSTPGHSDGDSSNRTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCG 85
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQWNAGYYGYAQGYE 373
FVQF R+ AEEAL+ LNG+ +G Q +RLSW RSPS+KQ++ D N+ N YYG Y
Sbjct: 86 FVQFVSRTDAEEALQGLNGSLIGKQAVRLSWVRSPSHKQSRGDSVNRRNNMYYG-TPFYG 144
Query: 374 NYGYAAAAPQDPSMY---YGGYPGYGNYQ 399
YGYA+ P P+MY YG YP YGN Q
Sbjct: 145 GYGYASPVPH-PNMYAAAYGTYPLYGNQQ 172
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 10/108 (9%)
Query: 53 PAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
P M + +G + P G RT+++G L + E L FA ++ +VK
Sbjct: 20 PNMCSLLKFLNSDSGSSTPGHSDGDSSN-RTVYVGGLDPNVSEDELRKAFAKY-DLASVK 77
Query: 113 VIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160
+ KQ G F++F+SR AE LQ NG+ + G+Q RL+W
Sbjct: 78 IPLGKQCG------FVQFVSRTDAEEALQGLNGSLI--GKQAVRLSWV 117
>gi|16215602|emb|CAC95017.1| TIAR protein [Xenopus laevis]
Length = 389
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 164/347 (47%), Gaps = 37/347 (10%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG-------- 124
+ GQP RTL++G+L + E + F+ G + K I + G+ G
Sbjct: 2 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKSITEQTDGRRVGASVSFPVL 58
Query: 125 -------YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIF 177
Y F+EF A L NG + E ++NWA+ + +K+D + +F
Sbjct: 59 PNANNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVF 116
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
VGDL+ ++T ++ F A + A+VV D T ++KGYGFV F ++ + A+ M
Sbjct: 117 VGDLSPEITTEDIKSAF-APFGKISDARVVKDMATSKSKGYGFVSFYNKLDAENAIVHMG 175
Query: 238 GVFCSTRPMRIGPATNKKTVSASYQ--NSQVAQSDDDPN-----NTTVFVGNLDSIVTDE 290
G + R +R AT K S Q N++ + DD N N TV+ G + S +T++
Sbjct: 176 GQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFDDVVNQSTAKNCTVYCGGIGSGLTEQ 235
Query: 291 HLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP- 349
+R+ F +GQ++ +++ K F++F+ A A+ +NGT + G ++ WG+
Sbjct: 236 LMRQTFGVFGQILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNGTTIEGHVVKCYWGKETP 295
Query: 350 --SNKQAQPDPNQWNAGYYGYAQGY-ENYG-YAAAAPQDPSMYYGGY 392
+ Q D +QW G +G G + YG Y Q PS YG Y
Sbjct: 296 DMTKNFQQVDYSQW--GQWGQMYGSPQQYGQYVTNGWQVPS--YGVY 338
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 78/188 (41%), Gaps = 27/188 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ T + +GYGF+
Sbjct: 100 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATSKSKGYGFV 159
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 160 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFDDVVNQST 217
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF +++ KGY F+RF
Sbjct: 218 AKNCTVYCGGIGSGLTEQLMRQTFGV-------FGQILEIRVFPEKGYSFIRFSTHDSAA 270
Query: 231 RAMTEMNG 238
A+ +NG
Sbjct: 271 HAIVSVNG 278
>gi|345324102|ref|XP_001514793.2| PREDICTED: nucleolysin TIAR-like [Ornithorhynchus anatinus]
Length = 452
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 141/282 (50%), Gaps = 23/282 (8%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 130 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 187
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 188 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 246
Query: 245 PMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFS 297
+R AT K S Q + Q + P N TV+ G + S +TD+ +R+ FS
Sbjct: 247 QIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFS 306
Query: 298 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQ--A 354
+GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP +
Sbjct: 307 PFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQ 366
Query: 355 QPDPNQWNAGYYGYAQGYEN---YG-YAAAAPQDPSMYYGGY 392
Q D +QW ++Q Y N YG Y A Q PS YG Y
Sbjct: 367 QVDYSQWGQ----WSQVYGNPQQYGQYMANGWQVPS--YGMY 402
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIE 129
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 165 TPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVS 224
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDDT 171
F ++ AE + G + G + R NWA+ F +
Sbjct: 225 FYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSP 282
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 283 KNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAAH 335
Query: 232 AMTEMNGV 239
A+ +NG
Sbjct: 336 AIVSVNGT 343
>gi|297307145|ref|NP_001167497.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Xenopus laevis]
gi|50416510|gb|AAH77169.1| Unknown (protein for MGC:78766) [Xenopus laevis]
Length = 385
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 142/284 (50%), Gaps = 23/284 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G + K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMD--TAGNDPYCFVEFFEHRHAAASLA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRD----------DTPDH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ +++ +
Sbjct: 65 AINGRKILGKE--VKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEISTDDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
AT K S S Q + P+N TV+ G + S ++++ +R+ FS +GQ++
Sbjct: 182 ATRKPPAPKSTFESNAKQLTYEEVVNQSSPSNCTVYCGGVTSGLSEQLMRQTFSPFGQIM 241
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
V++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 242 EVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGK 285
>gi|344250807|gb|EGW06911.1| Nucleolysin TIA-1 [Cricetulus griseus]
Length = 387
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 163/344 (47%), Gaps = 35/344 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNK----------KTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 300
AT K T SY + V+QS P+N TV+ G + S +T++ +R+ FS +G
Sbjct: 182 ATRKPPAPKSTYELNTKQLSY-DEVVSQSS--PSNCTVYCGGVTSGLTEQLMRQTFSPFG 238
Query: 301 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ 360
Q++ +++ K F++F A A+ +NGT + G ++ WG+ + +P Q
Sbjct: 239 QILEIRVFPDKGYSFIRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLD---MINPVQ 295
Query: 361 WNAGYYGYAQGYENYGYAAAAPQDPSMYY-GGY--PGYGNYQQP 401
GY Y +G Q Y G+ P YG Y QP
Sbjct: 296 QQQNQIGYPPAYGQWGQWYGNAQQIGQYVPNGWQVPAYGMYGQP 339
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 10/184 (5%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
A+ MNG + +++ AT + +S V + ++ VFVG+L +
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEI 117
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ I
Sbjct: 118 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 177
Query: 342 RLSW 345
R +W
Sbjct: 178 RTNW 181
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|389747119|gb|EIM88298.1| hypothetical protein STEHIDRAFT_95374 [Stereum hirsutum FP-91666
SS1]
Length = 932
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 114/212 (53%), Gaps = 40/212 (18%)
Query: 83 TLWIGDLQYWMDETYLN-TCFAHTGEVVAVKVIR---NKQTGQIE---GYGFIEFISRAG 135
TLW G+L+ WMDE Y C + +++KV + TGQ GY F+ F ++
Sbjct: 184 TLWWGELEPWMDEEYAKQVCGLMNWDPLSIKVPHPAPDPVTGQQANNPGYCFLTFSTQGQ 243
Query: 136 AERVLQTFN----GTP--MPNGEQNFRLNWASF-----------GAGEKRDDTP-DHTIF 177
A VL N GTP MPN + F LNWAS G ++ P +++IF
Sbjct: 244 ASSVLNQINTTNSGTPITMPNSTKPFLLNWASSTPIPPSLSPPGGVSAQQQQYPKEYSIF 303
Query: 178 VGDLAADVTDYMLQETFRA--------RYP-------STKGAKVVIDRLTGRTKGYGFVR 222
VGDLA + ++ L FR R P S K AK+++D +TG ++GYGFVR
Sbjct: 304 VGDLAPEASNSDLVAVFRNPVLGLRNDREPKFIRPFLSCKSAKIMLDPVTGVSRGYGFVR 363
Query: 223 FGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
F DE++Q RA+ EM+G++C +RPMRI PAT K
Sbjct: 364 FTDEADQQRALIEMHGLYCLSRPMRISPATAK 395
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 55/77 (71%)
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
DP NTTVFVG L ++++E LR F+ +G++ +VK+P GK CGFVQF ++ AE A+ +
Sbjct: 561 DPYNTTVFVGGLSPLISEETLRTFFAPFGEIHYVKVPVGKHCGFVQFVRKADAERAIEKM 620
Query: 332 NGTQLGGQNIRLSWGRS 348
G +GG IRLSWGRS
Sbjct: 621 QGFPIGGSRIRLSWGRS 637
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA GE+ VKV K G F++F+ +A AER ++
Sbjct: 566 TVFVGGLSPLISEETLRTFFAPFGEIHYVKVPVGKHCG------FVQFVRKADAERAIEK 619
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 620 MQGFPI--GGSRIRLSW 634
>gi|392927018|ref|NP_509705.3| Protein TIAR-3 [Caenorhabditis elegans]
gi|211970450|emb|CAB01717.3| Protein TIAR-3 [Caenorhabditis elegans]
Length = 450
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 110/198 (55%), Gaps = 11/198 (5%)
Query: 166 EKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFG 224
E R DT H +FVGDL+ DV++ +L+ TF ++ AKV+ D T ++KGYGFV F
Sbjct: 216 EMRIDTSKHFHVFVGDLSKDVSNELLKSTF-TKFGEVSEAKVIRDVQTQKSKGYGFVSFP 274
Query: 225 DESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNS--QVAQSDDDPNNTTVFVGN 282
++ A+ MNG + R +R A K + + + QV S +NT+V+VGN
Sbjct: 275 NKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTK-ADNTSVYVGN 333
Query: 283 LDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ TD LR+LFS YG + V+I +R FV++ + CA +A+ +NG ++ G +R
Sbjct: 334 ISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKEMAGNQVR 393
Query: 343 LSWGRSPSNKQAQPDPNQ 360
SWGR+ Q PNQ
Sbjct: 394 CSWGRT------QAVPNQ 405
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 25/169 (14%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL + L + F GEV KVIR+ QT + +GYGF+ F ++ AE +
Sbjct: 227 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 286
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDD-----------TPDHT-IFVGDLAADVTDYMLQ 191
NG + G++ R NWA+ E+ D D+T ++VG+++ TD L+
Sbjct: 287 NGKWI--GKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLR 344
Query: 192 ETFRARYPSTKG--AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
+ F ST G A+V I +T+ Y FVR+ + +A+ EMNG
Sbjct: 345 DLF-----STYGDIAEVRI----FKTQRYAFVRYEKKECATKAIMEMNG 384
>gi|297687497|ref|XP_002821249.1| PREDICTED: nucleolysin TIAR isoform 4 [Pongo abelii]
Length = 396
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 144/293 (49%), Gaps = 26/293 (8%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
+ GQP RTL++G+L + E + F+ G + K+I + + Y F+EF
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYE 57
Query: 133 RAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRD---DTP-------DH-TIFVGDL 181
A L NG + E ++NWA+ + +K+ TP DH +FVGDL
Sbjct: 58 HRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKILPVSTPVPNALISDHFHVFVGDL 115
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G +
Sbjct: 116 SPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWL 174
Query: 242 STRPMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRE 294
R +R AT K S Q + Q + P N TV+ G + S +TD+ +R+
Sbjct: 175 GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQ 234
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 235 TFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 287
>gi|116191711|ref|XP_001221668.1| hypothetical protein CHGG_05573 [Chaetomium globosum CBS 148.51]
gi|88181486|gb|EAQ88954.1| hypothetical protein CHGG_05573 [Chaetomium globosum CBS 148.51]
Length = 413
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 150/324 (46%), Gaps = 49/324 (15%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAA 183
YGF+E+ AER +QT NG + E R+NWA ++DT +H IFVGDL+
Sbjct: 71 YGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNSTNKEDTSNHFHIFVGDLSN 128
Query: 184 DVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST 243
+V D +L + F A + S A+V+ D TGR++GYGFV F + + +A++ M+G + +
Sbjct: 129 EVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGS 187
Query: 244 RPMRIGPATNK---------------KTVSASYQNSQV----AQSDDDPNN------TTV 278
R +R A K T + Y + S D N TT
Sbjct: 188 RAIRCNWANQKGQPSMAQQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMIVNQTPAWQTTC 247
Query: 279 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 338
+VGNL T + + LF +G +V + A + FV+ A A+ LNG + G
Sbjct: 248 YVGNLTPYTTQQDIVPLFQNFGFVVESRFQADRGFSFVKMDTHENAAMAICQLNGYNVNG 307
Query: 339 QNIRLSWG--RSPSNKQAQPDPNQWNA-------GY------YGYAQGYENYGYAAAAPQ 383
+ ++ SWG ++PS+ Q Q DPNQ + GY Y G Y AAAP
Sbjct: 308 RPLKCSWGKDKTPSHPQ-QFDPNQQYSPQSAQTPGYPTTPSTYFNQYGSGTYPREAAAPN 366
Query: 384 D----PSMYYGGYPGYGNYQQPQQ 403
P M Y G P G Y + QQ
Sbjct: 367 SVVNAPPMGYSGPPSAGGYGRGQQ 390
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 79/203 (38%), Gaps = 37/203 (18%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL +++ L F+ G V +V+ + +TG+ GYGF+ F R AE+ L +
Sbjct: 121 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSM 180
Query: 144 NGTPMPNGEQNFRLNWASFGAGEK-------------------RDDTPDHTIFVGDL--- 181
+G + G + R NWA+ P H + D+
Sbjct: 181 DGEWL--GSRAIRCNWANQKGQPSMAQQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMIVN 238
Query: 182 ----------AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
++T Y Q+ P + V++ +G+ FV+
Sbjct: 239 QTPAWQTTCYVGNLTPYTTQQDI---VPLFQNFGFVVESRFQADRGFSFVKMDTHENAAM 295
Query: 232 AMTEMNGVFCSTRPMRIGPATNK 254
A+ ++NG + RP++ +K
Sbjct: 296 AICQLNGYNVNGRPLKCSWGKDK 318
>gi|390359470|ref|XP_782936.3| PREDICTED: nucleolysin TIAR-like [Strongylocentrotus purpuratus]
Length = 430
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 23/280 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTG--EVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
RTL++G+L + E + F + + K+I + G + Y F+EF AE
Sbjct: 25 RTLYVGNLDRRVTEELVFQLFLQIAPSKTKSCKMIADH--GNSDPYCFVEFYDSVTAEAA 82
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
+ NG + ++ ++NWA+ G ++D T H +FVGDL ++ L+ F +Y
Sbjct: 83 MVAMNGRTV--FDKPIKVNWAT-TQGSRKDTTHHHHVFVGDLVQEMKTAELRALFD-KYG 138
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP----MRIGPATNKK 255
S A+VV D TG+++ YGFV F E + A+ EMNG P +R G AT K
Sbjct: 139 SITDARVVRDPETGKSRCYGFVSFEQEEDAQCAIKEMNGAILPQYPGMKAIRTGWATRKP 198
Query: 256 TVSASYQNSQVAQSD-------DDPNNTTVFVGNLD-SIVTDEHLRELFSQYGQLVHVKI 307
T S++ Q+ D PNN TV+VG L ++ LR++F +G + V+
Sbjct: 199 T---SHKPPQIEAKDYERVLNETSPNNCTVYVGGLQFKFSAEDLLRKVFGPFGAIQEVRT 255
Query: 308 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
K FV+FA+ A A+ ++G+ + G ++ SWG+
Sbjct: 256 FPEKAFAFVRFANHESATNAIVSVHGSPIEGHVVKCSWGK 295
>gi|115486297|ref|NP_001068292.1| Os11g0620100 [Oryza sativa Japonica Group]
gi|77551976|gb|ABA94773.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113645514|dbj|BAF28655.1| Os11g0620100 [Oryza sativa Japonica Group]
gi|215767783|dbj|BAH00012.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218186124|gb|EEC68551.1| hypothetical protein OsI_36864 [Oryza sativa Indica Group]
gi|222616351|gb|EEE52483.1| hypothetical protein OsJ_34666 [Oryza sativa Japonica Group]
Length = 441
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 143/292 (48%), Gaps = 32/292 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + ++ L+ F G V K+IR +++ +GF+++ R A +
Sbjct: 79 RSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSS----FGFVDYYDRRSAAIAIV 134
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
+ NG + Q ++NWA A +R+DT H IFVGDL +VTD L A + S
Sbjct: 135 SLNGRQLFG--QPIKVNWAY--ASTQREDTSGHFNIFVGDLCPEVTDAALFAF-FAGFTS 189
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D+ TGR++G+GFV F ++ + A+ E+NG + R +R AT
Sbjct: 190 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWLGNRQVRCNWATKGANAGEE 249
Query: 261 YQNSQVA----------------QSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQY- 299
QN+ ++D P N TTV+VGNL V + F
Sbjct: 250 KQNTDSKGMIELTNGSSEGGKDNANEDGPENNPQYTTVYVGNLPHDVNSNDVHRFFHSLG 309
Query: 300 -GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
G + V++ K GFV+++ A A++ NG +GG+ I+ SWG P+
Sbjct: 310 VGSIEEVRVTRDKGFGFVRYSTHEEAALAIQTGNGQLIGGRQIKCSWGSKPT 361
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 23/189 (12%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VTD +L E F++ P +G K++ +GFV + D
Sbjct: 74 DSSTCRSVYVGNIHLQVTDSLLHEVFQSIGP-VEGCKLI----RKEKSSFGFVDYYDRRS 128
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ +NG +P+++ A Y ++Q +D + +FVG+L VT
Sbjct: 129 AAIAIVSLNGRQLFGQPIKVNWA---------YASTQ---REDTSGHFNIFVGDLCPEVT 176
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L F+ + ++ ++ G FV F ++ A+ A+ LNG LG + +R
Sbjct: 177 DAALFAFFAGFTSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWLGNRQVR 236
Query: 343 LSWGRSPSN 351
+W +N
Sbjct: 237 CNWATKGAN 245
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--GFVQFADRSCAEEAL 328
D +V+VGN+ VTD L E+F G + K+ ++ GFV + DR A A+
Sbjct: 74 DSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSFGFVDYYDRRSAAIAI 133
Query: 329 RMLNGTQLGGQNIRLSWGRSPSNKQ 353
LNG QL GQ I+++W + + ++
Sbjct: 134 VSLNGRQLFGQPIKVNWAYASTQRE 158
>gi|324510042|gb|ADY44204.1| Nucleolysin TIAR [Ascaris suum]
Length = 367
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 110/202 (54%), Gaps = 7/202 (3%)
Query: 155 FRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGR 214
+ NWA K D + +FVGDLA ++ + L+ F A Y AKV+ D T +
Sbjct: 115 LKANWAMQNQMPKVDTSKHFHVFVGDLATEIDNNALKAAFAA-YGEISEAKVIRDPQTMK 173
Query: 215 TKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPN 274
+KGYGFV F + +A+ MNG R +R A+ +K SA +++ D+ N
Sbjct: 174 SKGYGFVSFPSKESAEKAIAGMNGQLIGRRQIRTNWAS-RKPASAEEAHTKEQTFDEVFN 232
Query: 275 -----NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALR 329
NT+V+VGN+ S T+E LRE F+ G + V+I + FV++A + A A+
Sbjct: 233 ATRADNTSVYVGNVHSSTTEEDLREAFASIGAISEVRIFKQQGYAFVRYATKEAATRAIM 292
Query: 330 MLNGTQLGGQNIRLSWGRSPSN 351
+NG ++ GQNI+ SWGR+P++
Sbjct: 293 QMNGKEINGQNIKCSWGRTPND 314
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 24/170 (14%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL +D L FA GE+ KVIR+ QT + +GYGF+ F S+ AE+ +
Sbjct: 136 VFVGDLATEIDNNALKAAFAAYGEISEAKVIRDPQTMKSKGYGFVSFPSKESAEKAIAGM 195
Query: 144 NGTPMPNGEQNFRLNWASFG-AGEKRDDTPDHT--------------IFVGDLAADVTDY 188
NG + G + R NWAS A + T + T ++VG++ + T+
Sbjct: 196 NGQLI--GRRQIRTNWASRKPASAEEAHTKEQTFDEVFNATRADNTSVYVGNVHSSTTEE 253
Query: 189 MLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
L+E F ++ GA + + + +GY FVR+ + RA+ +MNG
Sbjct: 254 DLREAF-----ASIGA--ISEVRIFKQQGYAFVRYATKEAATRAIMQMNG 296
>gi|326924063|ref|XP_003208252.1| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIAR-like [Meleagris
gallopavo]
Length = 382
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 155/322 (48%), Gaps = 25/322 (7%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F+ G + K+I + + Y F+EF A L N
Sbjct: 22 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMN 79
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
G + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A + A
Sbjct: 80 GRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAF-APFGKISDA 136
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNS 264
+VV D TG++KGYGFV F ++ + A+ M G + R +R S Q +
Sbjct: 137 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRXXXXXXXXPAPKSTQEN 196
Query: 265 QVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 317
Q + P N TV+ G + S +TD+ +R+ FS +GQ++ +++ K FV+
Sbjct: 197 NTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVR 256
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPNQWNAGYYGYAQGYEN 374
F+ A A+ +NGT + G ++ WG+ SP + Q D +QW ++Q Y N
Sbjct: 257 FSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQ----WSQVYGN 312
Query: 375 ---YG-YAAAAPQDPSMYYGGY 392
YG Y A Q PS YG Y
Sbjct: 313 PQQYGQYMANGWQVPS--YGMY 332
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 23/184 (12%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+ F
Sbjct: 96 PSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSF 155
Query: 131 ISRAGAERVLQTFNG----------------TPMPNGEQNFRLNWASFGAGEKRDDTPDH 174
++ AE + G P P Q F + +
Sbjct: 156 YNKLDAENAIVHMGGQWLGGRQIRXXXXXXXXPAPKSTQENNTKQLRFEDVVNQSSPKNC 215
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
T++ G +A+ +TD ++++TF P + +++ KGY FVRF A+
Sbjct: 216 TVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAAHAIV 268
Query: 235 EMNG 238
+NG
Sbjct: 269 SVNG 272
>gi|297687493|ref|XP_002821247.1| PREDICTED: nucleolysin TIAR isoform 2 [Pongo abelii]
gi|410976207|ref|XP_003994514.1| PREDICTED: nucleolysin TIAR isoform 2 [Felis catus]
Length = 393
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 157/331 (47%), Gaps = 34/331 (10%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK--------------- 117
+ GQP RTL++G+L + E + F+ G + K+I +
Sbjct: 3 EDDGQP---RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVL 59
Query: 118 QTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TI 176
Q + Y F+EF A L NG + E ++NWA+ + +K+ +H +
Sbjct: 60 QHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKILPVNHFHV 117
Query: 177 FVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM 236
FVGDL+ ++T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M
Sbjct: 118 FVGDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 176
Query: 237 NGVFCSTRPMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTD 289
G + R +R AT K S Q + Q + P N TV+ G + S +TD
Sbjct: 177 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTD 236
Query: 290 EHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-S 348
+ +R+ FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ S
Sbjct: 237 QLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 296
Query: 349 PSNKQA--QPDPNQWN--AGYYGYAQGYENY 375
P + Q D +QW + YG Q Y Y
Sbjct: 297 PDMTKNFQQVDYSQWGQWSQVYGNPQQYGQY 327
>gi|390474361|ref|XP_003734771.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Callithrix jacchus]
gi|403260486|ref|XP_003922702.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 386
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 155/317 (48%), Gaps = 34/317 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSASYQNSQVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
AT K S S Q D P+N TV+ G + S +T++ +R+ FS +GQ++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ-- 355
+++ K FV+F A A+ +NGT + G ++ WG+ +P +Q+Q
Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQSQIG 301
Query: 356 -PDP-NQWNAGYYGYAQ 370
P P QW +YG AQ
Sbjct: 302 YPQPYGQWGQ-WYGNAQ 317
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 10/184 (5%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
A+ MNG + +++ AT + +S V + ++ VFVG+L +
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEI 117
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ I
Sbjct: 118 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 177
Query: 342 RLSW 345
R +W
Sbjct: 178 RTNW 181
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|123374542|ref|XP_001297747.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121878039|gb|EAX84817.1| hypothetical protein TVAG_508040 [Trichomonas vaginalis G3]
Length = 364
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 135/274 (49%), Gaps = 17/274 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAH-TGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
LW+G+ W DE L + TG+ + ++K TG YGF+ F S+ A V++
Sbjct: 4 LWVGNTVIWKDEESLMSDVKQMTGKQPKSCWFAKDKSTGTHLNYGFLVFASKNNAAEVIR 63
Query: 142 TFNGTPMPNGEQN-FRLNWASFGAGEKRDDTPD---HTIFVGDLAADVTDYMLQETFRAR 197
NGT +PN N F+L W + D + +VG L + V + L E F+
Sbjct: 64 LLNGTEVPNSNGNKFKLGWGNTTFESDADTIAKAEGFSCYVGGLPSSVKESELLEFFKRY 123
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+P+ A+++ D G +KGYGF++F E + A+ +N V P+++ T + V
Sbjct: 124 FPNAINARLIRDE-KGNSKGYGFIKFNKHQEVIDAIQTLNNVNFKGHPLKVKEGTQNR-V 181
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLD-SIVTDEHLRELFSQYGQLVHVKI-PAGKRCGF 315
S + NS D NTT+F+ N+D +V +E L + F QYG ++ VKI P +
Sbjct: 182 STNENNSL------DVKNTTLFITNIDPDVVKEETLLQNFHQYGNVLSVKIDPNNQSWAT 235
Query: 316 VQFADRSCAEEALRMLNGTQLGG-QNIRLSWGRS 348
V + AE A L+G+Q GG + WG++
Sbjct: 236 VVMETHTSAESAKNALSGSQFGGTTKAVIEWGKA 269
>gi|351714346|gb|EHB17265.1| Nucleolysin TIA-1 isoform p40 [Heterocephalus glaber]
Length = 386
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 154/317 (48%), Gaps = 34/317 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
AT K S S Q S P+N TV+ G + S +T++ +R+ FS +GQ++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ-- 355
+++ K FV+F A A+ +NGT + G ++ WG+ +P +Q Q
Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIG 301
Query: 356 -PDP-NQWNAGYYGYAQ 370
P P QW +YG AQ
Sbjct: 302 YPQPYGQWGQ-WYGNAQ 317
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 10/184 (5%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
A+ MNG + +++ AT + +S V + ++ VFVG+L +
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEI 117
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ I
Sbjct: 118 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 177
Query: 342 RLSW 345
R +W
Sbjct: 178 RTNW 181
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|356502327|ref|XP_003519971.1| PREDICTED: polyadenylate-binding protein 5-like [Glycine max]
Length = 616
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 143/271 (52%), Gaps = 22/271 (8%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL+ +DE L FA G + +++V R+ +T + GY ++ F++ A ++
Sbjct: 7 SLYVGDLERNVDEAQLFQLFARVGPIFSIRVCRD-ETNRSLGYAYVNFVNPQDAANAMEH 65
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ NG ++ R+ +++ ++ + +F+ +L + + L +TF A +
Sbjct: 66 LNFTPL-NG-KSIRVMFSNRDPSIRKSGYAN--VFIKNLDISIDNKTLHDTFAA-FGFVL 120
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
+KV +D + G++KGYGFV+F +E A+ E+NG+ + + + +G N++
Sbjct: 121 SSKVAVDSI-GQSKGYGFVQFDNEESAQNAIKELNGMLINDKKVYVGLFVNRQ------- 172
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL---VHVKIPAGK-RC-GFVQ 317
+ AQ D P T V+V N TDE L +LFS YG + V +K GK RC GFV
Sbjct: 173 --ERAQVDGSPKFTNVYVKNFSETYTDEDLEQLFSTYGTITSAVVMKDTDGKSRCFGFVN 230
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
F A A+ LNGT + + L GR+
Sbjct: 231 FESPDSAVAAVERLNGTTVNDDKV-LYVGRA 260
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 142/283 (50%), Gaps = 16/283 (5%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G V++ KV + GQ +GYGF++F + A+ ++
Sbjct: 94 NVFIKNLDISIDNKTLHDTFAAFGFVLSSKVAVDS-IGQSKGYGFVQFDNEESAQNAIKE 152
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETFRARYPST 201
NG + N ++ + + + + D +P T ++V + + TD L++ F + Y +
Sbjct: 153 LNGM-LINDKKVYVGLFVNRQERAQVDGSPKFTNVYVKNFSETYTDEDLEQLF-STYGTI 210
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST-RPMRIGPATNKKT---- 256
A VV+ G+++ +GFV F + A+ +NG + + + +G A K
Sbjct: 211 TSA-VVMKDTDGKSRCFGFVNFESPDSAVAAVERLNGTTVNDDKVLYVGRAQRKAEREAE 269
Query: 257 VSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAG--K 311
+ A ++ ++ + + + T ++V NLD + D+ L+ELFS++G + K+ P G K
Sbjct: 270 LKARFELERIRKYEK-YHGTNLYVKNLDYNINDDKLKELFSEFGTITSCKVMLEPNGRSK 328
Query: 312 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 354
GFV F+ A AL +NG +G + + ++ + ++A
Sbjct: 329 GYGFVAFSAPRNANRALHEMNGKMIGRRPLYVAVAQRKEERKA 371
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 275 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCG--FVQFADRSCAEEALR 329
N +++VG+L+ V + L +LF++ G + +++ + G +V F + A A+
Sbjct: 5 NASLYVGDLERNVDEAQLFQLFARVGPIFSIRVCRDETNRSLGYAYVNFVNPQDAANAME 64
Query: 330 MLNGTQLGGQNIRLSWG-RSPSNKQA 354
LN T L G++IR+ + R PS +++
Sbjct: 65 HLNFTPLNGKSIRVMFSNRDPSIRKS 90
>gi|449282273|gb|EMC89133.1| Nucleolysin TIAR, partial [Columba livia]
Length = 378
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 159/337 (47%), Gaps = 38/337 (11%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK---------------QTGQIEGYGFIE 129
++G+L + E + F+ G + K+I + Q + Y F+E
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYM 189
F A L NG + E ++NWA+ + +K+D + +FVGDL+ ++T
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTED 118
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +R
Sbjct: 119 IKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN 177
Query: 250 PATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 302
AT K S Q + Q + P N TV+ G + S +TD+ +R+ FS +GQ+
Sbjct: 178 WATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQI 237
Query: 303 VHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPN 359
+ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP + Q D +
Sbjct: 238 MEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYS 297
Query: 360 QWNAGYYGYAQGYEN---YG-YAAAAPQDPSMYYGGY 392
QW ++Q Y N YG Y A Q PS YG Y
Sbjct: 298 QWGQ----WSQVYGNPQQYGQYMANGWQVPS--YGMY 328
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 90 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 149
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 150 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 207
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 208 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 260
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 261 HAIVSVNGT 269
>gi|157131106|ref|XP_001655804.1| tRNA selenocysteine associated protein (secp43) [Aedes aegypti]
gi|108871647|gb|EAT35872.1| AAEL011988-PA [Aedes aegypti]
Length = 318
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 99/175 (56%), Gaps = 5/175 (2%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE VK++RNK TG GY F+ F + A +
Sbjct: 8 LWMGSLESYMTENFILAAFRKMGEDPQTVKLMRNKYTGDPAGYCFVSFKTDEAAIDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG P+P N FRLN A+ + + +++VGDL++DV DY L F A+Y S
Sbjct: 68 LNGKPIPGTNPLVRFRLNSATNNQNKALLADREFSVWVGDLSSDVDDYSLYRVFSAKYTS 127
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNK 254
K AKV++D +G +KGYGFV+FG E EQ A+ EMNG +P++I A K
Sbjct: 128 IKTAKVILDS-SGFSKGYGFVKFGLEDEQKSALYEMNGFIGLGCKPLKICNAVPK 181
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 101/240 (42%), Gaps = 35/240 (14%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L + +T+ + FR + K++ ++ TG GY FV F + + AM +
Sbjct: 8 LWMGSLESYMTENFILAAFRKMGEDPQTVKLMRNKYTGDPAGYCFVSFKTDEAAIDAMHK 67
Query: 236 MNGV-FCSTRPM---RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEH 291
+NG T P+ R+ ATN QN + + +V+VG+L S V D
Sbjct: 68 LNGKPIPGTNPLVRFRLNSATNN-------QNKALLADRE----FSVWVGDLSSDVDDYS 116
Query: 292 LRELFS-QYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
L +FS +Y + K+ K GFV+F + AL +NG LG + +++
Sbjct: 117 LYRVFSAKYTSIKTAKVILDSSGFSKGYGFVKFGLEDEQKSALYEMNGFIGLGCKPLKIC 176
Query: 345 WGR-SPSNKQ-----AQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYPGYGNY 398
P N+ P+ + YG A Y Y DPS Y+ Y + Y
Sbjct: 177 NAVPKPKNELGPAGPTSSTPSAASLLGYGTATDYSQY-------YDPSTYWQNYSAWQGY 229
>gi|395501989|ref|XP_003755369.1| PREDICTED: nucleolysin TIAR [Sarcophilus harrisii]
Length = 392
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 159/337 (47%), Gaps = 38/337 (11%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK---------------QTGQIEGYGFIE 129
++G+L + E + F+ G + K+I + Q + Y F+E
Sbjct: 15 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 74
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYM 189
F A L NG + E ++NWA+ + +K+D + +FVGDL+ ++T
Sbjct: 75 FYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTED 132
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +R
Sbjct: 133 IKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN 191
Query: 250 PATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 302
AT K S Q + Q + P N TV+ G + S +TD+ +R+ FS +GQ+
Sbjct: 192 WATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQI 251
Query: 303 VHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPN 359
+ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP + Q D +
Sbjct: 252 MEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYS 311
Query: 360 QWNAGYYGYAQGYEN---YG-YAAAAPQDPSMYYGGY 392
QW ++Q Y N YG Y A Q PS YG Y
Sbjct: 312 QWGQ----WSQVYGNPQQYGQYMANGWQVPS--YGMY 342
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+ F
Sbjct: 106 PSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSF 165
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDDTP 172
++ AE + G + G + R NWA+ F +
Sbjct: 166 YNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPK 223
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF A
Sbjct: 224 NCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAAHA 276
Query: 233 MTEMNG 238
+ +NG
Sbjct: 277 IVSVNG 282
>gi|291386623|ref|XP_002709696.1| PREDICTED: TIA1 cytotoxic granule-associated RNA binding
protein-like [Oryctolagus cuniculus]
Length = 386
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 155/332 (46%), Gaps = 31/332 (9%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F+ G K+I + T + Y F+EF A L N
Sbjct: 21 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAMN 78
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
G + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A + A
Sbjct: 79 GRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRISDA 135
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNS 264
+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K S S
Sbjct: 136 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYES 195
Query: 265 QVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 317
Q D P+N TV+ G + S +T++ +R+ FS +GQ++ +++ K FV+
Sbjct: 196 NTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVR 255
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQPDPNQWNAGYYGYAQG 371
F A A+ +NGT + G ++ WG+ +P +Q Q GY Q
Sbjct: 256 FNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQ----------IGYPQA 305
Query: 372 YENYGYAAAAPQDPSMYY-GGY--PGYGNYQQ 400
Y +G Q Y G+ P YG Y Q
Sbjct: 306 YGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQ 337
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 93 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 152
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 153 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSS 210
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 211 PSNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAA 263
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 264 HAIVSVNGT 272
>gi|344283907|ref|XP_003413712.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Loxodonta
africana]
Length = 386
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 154/317 (48%), Gaps = 34/317 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSASYQNSQVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
AT K S S Q D P+N TV+ G + S +T++ +R+ FS +GQ++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ-- 355
+++ K FV+F A A+ +NGT + G ++ WG+ +P +Q Q
Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIG 301
Query: 356 -PDP-NQWNAGYYGYAQ 370
P P QW +YG AQ
Sbjct: 302 YPQPYGQWGQ-WYGNAQ 317
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 90/183 (49%), Gaps = 9/183 (4%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
+D T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFYEHRH 58
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ MNG + +++ AT + +S V + ++ VFVG+L +T
Sbjct: 59 AAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEIT 118
Query: 289 DEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ IR
Sbjct: 119 TEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIR 178
Query: 343 LSW 345
+W
Sbjct: 179 TNW 181
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|73969892|ref|XP_866571.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 9 [Canis lupus
familiaris]
gi|301758208|ref|XP_002914947.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Ailuropoda
melanoleuca]
gi|410954995|ref|XP_003984144.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Felis catus]
gi|431912606|gb|ELK14624.1| Nucleolysin TIA-1 isoform p40 [Pteropus alecto]
Length = 386
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 160/346 (46%), Gaps = 42/346 (12%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSASYQNSQVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
AT K S S Q D P+N TV+ G + S +T++ +R+ FS +GQ++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQPD 357
+++ K FV+F A A+ +NGT + G ++ WG+ +P +Q Q
Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQ-- 299
Query: 358 PNQWNAGYYGYAQGYENYGYAAAAPQDPSMYY-GGY--PGYGNYQQ 400
GY Q Y +G Q Y G+ P YG Y Q
Sbjct: 300 --------IGYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQ 337
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 90/183 (49%), Gaps = 9/183 (4%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
+D T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFYEHRH 58
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ MNG + +++ AT + +S V + ++ VFVG+L +T
Sbjct: 59 AAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEIT 118
Query: 289 DEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ IR
Sbjct: 119 TEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIR 178
Query: 343 LSW 345
+W
Sbjct: 179 TNW 181
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|410900506|ref|XP_003963737.1| PREDICTED: nucleolysin TIAR-like isoform 2 [Takifugu rubripes]
Length = 408
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 154/315 (48%), Gaps = 34/315 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIR--NKQTGQIEG--------------- 124
+TL++G+L + E + F+ G + K+I N + +E
Sbjct: 8 KTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDVNNRDRLLEWLQLNNFYVWLCCLQH 67
Query: 125 -----YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVG 179
Y F+EF+ A T N + E ++NWA+ + +K+D + +FVG
Sbjct: 68 TSSDPYCFVEFVDHKDAASARATMNKRKILGKE--VKVNWATSPSCQKKDTSNHFHVFVG 125
Query: 180 DLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV 239
DL+ D+T ++ F A + A+V+ D TG++KGYGFV F ++ + A+++M G
Sbjct: 126 DLSPDITTEDIRAAF-APFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQ 184
Query: 240 FCSTRPMRIGPATNKKTVSASYQN--SQVAQSDD-----DPNNTTVFVGNLDSIVTDEHL 292
+ R +R AT K S+Q+ S+ + DD P+N TV+ G + S +T+ +
Sbjct: 185 WLQGRQIRTNWATRKPPAPKSFQDNGSKHLKFDDIVTQSSPHNCTVYCGGIQSGLTEHLM 244
Query: 293 RELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
++ FS +GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ +
Sbjct: 245 QQTFSPFGQIMEIRVFPDKGYSFVRFSSHDSAAHAIVSVNGTVIEGNLVKCFWGKESPDM 304
Query: 353 QAQPDPNQWNAGYYG 367
Q ++N Y+G
Sbjct: 305 QKNSQQVEYN--YWG 317
>gi|354500962|ref|XP_003512565.1| PREDICTED: nucleolysin TIAR [Cricetulus griseus]
Length = 336
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 15/263 (5%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 68
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 69 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 127
Query: 245 PMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFS 297
+R AT K S Q + Q + P N TV+ G + S +TD+ +R+ FS
Sbjct: 128 QIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFS 187
Query: 298 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA-- 354
+GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP +
Sbjct: 188 PFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQ 247
Query: 355 QPDPNQWN--AGYYGYAQGYENY 375
Q D +QW + YG Q Y Y
Sbjct: 248 QVDYSQWGQWSQVYGNPQQYGQY 270
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 45 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 104
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 105 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSS 162
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 163 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 215
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 216 HAIVSVNGT 224
>gi|108864589|gb|ABG22554.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 403
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 143/292 (48%), Gaps = 32/292 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + ++ L+ F G V K+IR +++ +GF+++ R A +
Sbjct: 41 RSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSS----FGFVDYYDRRSAAIAIV 96
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
+ NG + Q ++NWA A +R+DT H IFVGDL +VTD L A + S
Sbjct: 97 SLNGRQLFG--QPIKVNWAY--ASTQREDTSGHFNIFVGDLCPEVTDAALFAF-FAGFTS 151
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D+ TGR++G+GFV F ++ + A+ E+NG + R +R AT
Sbjct: 152 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWLGNRQVRCNWATKGANAGEE 211
Query: 261 YQNSQVA----------------QSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQY- 299
QN+ ++D P N TTV+VGNL V + F
Sbjct: 212 KQNTDSKGMIELTNGSSEGGKDNANEDGPENNPQYTTVYVGNLPHDVNSNDVHRFFHSLG 271
Query: 300 -GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
G + V++ K GFV+++ A A++ NG +GG+ I+ SWG P+
Sbjct: 272 VGSIEEVRVTRDKGFGFVRYSTHEEAALAIQTGNGQLIGGRQIKCSWGSKPT 323
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 23/189 (12%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VTD +L E F++ P +G K++ +GFV + D
Sbjct: 36 DSSTCRSVYVGNIHLQVTDSLLHEVFQSIGP-VEGCKLI----RKEKSSFGFVDYYDRRS 90
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ +NG +P+++ A Y ++Q +D + +FVG+L VT
Sbjct: 91 AAIAIVSLNGRQLFGQPIKVNWA---------YASTQ---REDTSGHFNIFVGDLCPEVT 138
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L F+ + ++ ++ G FV F ++ A+ A+ LNG LG + +R
Sbjct: 139 DAALFAFFAGFTSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWLGNRQVR 198
Query: 343 LSWGRSPSN 351
+W +N
Sbjct: 199 CNWATKGAN 207
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC--GFVQFADRSCAEEAL 328
D +V+VGN+ VTD L E+F G + K+ ++ GFV + DR A A+
Sbjct: 36 DSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSFGFVDYYDRRSAAIAI 95
Query: 329 RMLNGTQLGGQNIRLSWGRSPSNKQ 353
LNG QL GQ I+++W + + ++
Sbjct: 96 VSLNGRQLFGQPIKVNWAYASTQRE 120
>gi|10801574|dbj|BAB16700.1| TIA-1 like protein [Bombyx mori]
Length = 285
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 142/278 (51%), Gaps = 19/278 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E +L T F G+V K+IR + Y F+EF A L
Sbjct: 8 KTLYVGNLDPSVTEVFLCTLFGXIGDVKGCKIIREPGN---DPYAFLEFTCHTAAATALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETFRARYPS 200
N + + E ++NWA+ + + DT +H IFVGDL+ ++ +L+E F A +
Sbjct: 65 AMNKRVVLDKE--MKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK---KTV 257
++V D T ++KGY FV F +++ A+ MNG + +R +R +T K K V
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGV 181
Query: 258 SASYQNSQVAQ--------SDDDPNNTTVFVGNLDS-IVTDEHLRELFSQYGQLVHVKIP 308
+ +S+ A+ + P NTTV+ G S I+T+E ++ FSQ+GQ+ +++
Sbjct: 182 NEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF 241
Query: 309 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 346
K F++F + A A+ + T++ G ++ WG
Sbjct: 242 RDKGYAFIRFTTKEAAAHAIEATHNTEISGHTVKCFWG 279
Score = 37.7 bits (86), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 327
D+ + T++VGNLD VT+ L LF G + KI P F++F + A A
Sbjct: 3 DESHPKTLYVGNLDPSVTEVFLCTLFGXIGDVKGCKIIREPGNDPYAFLEFTCHTAAATA 62
Query: 328 LRMLNGTQLGGQNIRLSWGRSPSNK 352
L +N + + ++++W SP N+
Sbjct: 63 LAAMNKRVVLDKEMKVNWATSPGNQ 87
>gi|344255843|gb|EGW11947.1| Nucleolysin TIAR [Cricetulus griseus]
Length = 353
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 15/263 (5%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 28 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 85
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 86 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 144
Query: 245 PMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFS 297
+R AT K S Q + Q + P N TV+ G + S +TD+ +R+ FS
Sbjct: 145 QIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFS 204
Query: 298 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA-- 354
+GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP +
Sbjct: 205 PFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQ 264
Query: 355 QPDPNQWN--AGYYGYAQGYENY 375
Q D +QW + YG Q Y Y
Sbjct: 265 QVDYSQWGQWSQVYGNPQQYGQY 287
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 62 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 121
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 122 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSS 179
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF S G + I KGY FVRF
Sbjct: 180 PKNCTVYCGGIASGLTDQLMRQTF-----SPFGQIMEIRVFP--EKGYSFVRFSTHESAA 232
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 233 HAIVSVNGT 241
>gi|326936530|ref|XP_003214306.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Meleagris gallopavo]
Length = 423
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 161/341 (47%), Gaps = 30/341 (8%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F+ G K+I + T + Y F+EF A L N
Sbjct: 50 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAASALAAMN 107
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYMLQET 193
G + E ++NWA+ + +K+D + DH +FVGDL+ ++T ++
Sbjct: 108 GRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQASQDHFHVFVGDLSPEITTEDIKAA 165
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT
Sbjct: 166 F-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 224
Query: 254 KKTV-SASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 306
K ++Y+++ S DD P+N TV+ G + S +T++ +R+ FS +GQ++ ++
Sbjct: 225 KPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIR 284
Query: 307 IPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYY 366
+ K FV+F A A+ +NGT + G ++ WG+ + + NQ
Sbjct: 285 VFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETPDMVSPVQQNQ-----I 339
Query: 367 GYAQGYENYGYAAAAPQDPSMYYGGY--PGYGNYQQPQQPQ 405
GY Q Y +G Q G+ P YG Y Q Q
Sbjct: 340 GYPQAYGQWGQWYGNAQLGQYVPNGWQVPAYGMYGQAWNQQ 380
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 27/173 (15%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL + + FA G + +V+++ TG+ +GYGF+ F ++ AE +Q
Sbjct: 148 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 207
Query: 144 NGTPMPNGEQNFRLNWA---------SFGAGEKR---DDTPDH------TIFVGDLAADV 185
G + G + R NWA ++ + K+ DD + T++ G + + +
Sbjct: 208 GGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGL 265
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
T+ ++++TF + + +V D KGY FVRF A+ +NG
Sbjct: 266 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 311
>gi|322795213|gb|EFZ18035.1| hypothetical protein SINV_11488 [Solenopsis invicta]
Length = 455
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 130/268 (48%), Gaps = 10/268 (3%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E L F+ G V K+IR + Y F+EF + A L
Sbjct: 80 RTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREPGN---DPYAFVEFTNHQCAATALA 136
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N E+ ++NWA+ G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 137 AMNKRSFL--EKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAF-APFGE 193
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
++V D T ++KGY FV F +SE A+ MNG + +R +R +T K S
Sbjct: 194 ISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRS 253
Query: 261 YQNSQVAQSDDDPN-NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFA 319
+ ++ PN ++ G + +TDE +++ FS +G + +++ K F++F
Sbjct: 254 ERPRH--SNNSKPNYEEVLYCGGFTNGITDELIKKTFSPFGTIQDIRVFKDKGYAFIKFT 311
Query: 320 DRSCAEEALRMLNGTQLGGQNIRLSWGR 347
+ A A+ + T++ G ++ WG+
Sbjct: 312 TKEAATHAIESTHNTEINGSIVKCFWGK 339
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 31/192 (16%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL ++ L FA GE+ +++R+ QT + +GY F+ F+ ++ AE +
Sbjct: 170 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAM 229
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT----------IFVGDLAADVTDYMLQET 193
NG + G ++ R NW++ R + P H+ ++ G +TD ++++T
Sbjct: 230 NGQWL--GSRSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVLYCGGFTNGITDELIKKT 287
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM-----TEMNG--VFC----- 241
F + + + + +V D KGY F++F + A+ TE+NG V C
Sbjct: 288 F-SPFGTIQDIRVFKD------KGYAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGKE 340
Query: 242 STRPMRIGPATN 253
+ P +GP N
Sbjct: 341 NGDPNSVGPNAN 352
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 267 AQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSC 323
A ++ N T++VGNLD+ V+++ L LFSQ G + KI P FV+F + C
Sbjct: 71 ANMSEESNPRTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQC 130
Query: 324 AEEALRMLNGTQLGGQNIRLSWGRSPSNK 352
A AL +N + ++++W SP N+
Sbjct: 131 AATALAAMNKRSFLEKEMKVNWATSPGNQ 159
>gi|119569772|gb|EAW49387.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Homo sapiens]
Length = 336
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 15/263 (5%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 68
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 69 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 127
Query: 245 PMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFS 297
+R AT K S Q + Q + P N TV+ G + S +TD+ +R+ FS
Sbjct: 128 QIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFS 187
Query: 298 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA-- 354
+GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP +
Sbjct: 188 PFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQ 247
Query: 355 QPDPNQWN--AGYYGYAQGYENY 375
Q D +QW + YG Q Y Y
Sbjct: 248 QVDYSQWGQWSQVYGNPQQYGQY 270
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 45 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 104
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 105 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 162
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 163 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 215
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 216 HAIVSVNGT 224
>gi|188219591|ref|NP_071505.2| nucleolysin TIA-1 isoform p40 isoform 2 [Homo sapiens]
gi|114577930|ref|XP_001141557.1| PREDICTED: uncharacterized protein LOC459303 isoform 2 [Pan
troglodytes]
gi|397521824|ref|XP_003830986.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Pan paniscus]
gi|206729905|sp|P31483.3|TIA1_HUMAN RecName: Full=Nucleolysin TIA-1 isoform p40; AltName:
Full=RNA-binding protein TIA-1; AltName:
Full=T-cell-restricted intracellular antigen-1;
Short=TIA-1; AltName: Full=p40-TIA-1
gi|62702267|gb|AAX93193.1| unknown [Homo sapiens]
gi|119620230|gb|EAW99824.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_b [Homo sapiens]
gi|261861076|dbj|BAI47060.1| TIA1 cytotoxic granule-associated RNA binding protein [synthetic
construct]
gi|410226260|gb|JAA10349.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410254978|gb|JAA15456.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298556|gb|JAA27878.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353839|gb|JAA43523.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 386
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 154/317 (48%), Gaps = 34/317 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSASYQNSQVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
AT K S S Q D P+N TV+ G + S +T++ +R+ FS +GQ++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ-- 355
+++ K FV+F A A+ +NGT + G ++ WG+ +P +Q Q
Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIG 301
Query: 356 -PDP-NQWNAGYYGYAQ 370
P P QW +YG AQ
Sbjct: 302 YPQPYGQWGQ-WYGNAQ 317
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 10/184 (5%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
A+ MNG + +++ AT + +S V + ++ VFVG+L +
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEI 117
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ I
Sbjct: 118 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 177
Query: 342 RLSW 345
R +W
Sbjct: 178 RTNW 181
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|327267754|ref|XP_003218664.1| PREDICTED: nucleolysin TIAR-like [Anolis carolinensis]
Length = 342
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 131/263 (49%), Gaps = 15/263 (5%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 68
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 69 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 127
Query: 245 PMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFS 297
+R AT K + Q S Q + P N TV+ G + S +TD+ +R+ FS
Sbjct: 128 QIRTNWATRKPPAPKTTQESTTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFS 187
Query: 298 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA-- 354
+GQ++ + GK FV+F+ A A+ +NGT + G ++ WG+ SP +
Sbjct: 188 PFGQILETRAFPGKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQ 247
Query: 355 QPDPNQWN--AGYYGYAQGYENY 375
Q D +QW + YG Q Y Y
Sbjct: 248 QVDYSQWGQWSQVYGNPQQYGQY 270
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 45 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 104
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 105 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKTTQESTTKQLRFEDVVNQSS 162
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF S G + G KGY FVRF
Sbjct: 163 PKNCTVYCGGIASGLTDQLMRQTF-----SPFGQILETRAFPG--KGYSFVRFSTHESAA 215
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 216 HAIVSVNGT 224
>gi|253683353|dbj|BAH84828.1| TIA-1-related RNA binding protein [Spodoptera frugiperda]
Length = 283
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 139/278 (50%), Gaps = 18/278 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E ++ T F GEV K+IR + Y F+EF S A L
Sbjct: 8 KTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGN---DPYAFLEFTSHTAAATALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETFRARYPS 200
N + + E ++NWA+ + + DT +H IFVGDL+ ++ ++L++ F A +
Sbjct: 65 AMNKRVVLDKE--MKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F +++ A+ MNG + +R +R +T K
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKPN 181
Query: 255 ----KTVSASYQNSQVAQSDDDPNNTTVFVGNLDS-IVTDEHLRELFSQYGQLVHVKIPA 309
+ A + P NTTV+ G S ++T++ ++ FSQ+GQ+ V++
Sbjct: 182 EGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNVITEDLMQNTFSQFGQIQDVRVFR 241
Query: 310 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
K F++F + A A+ + T++ G ++ WG+
Sbjct: 242 DKGYAFIRFTTKEAAAHAIEATHNTEISGHIVKCFWGK 279
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 327
D+ + T++VGNLD+ VT+ + LF Q G++ KI P F++F + A A
Sbjct: 3 DESHPKTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGNDPYAFLEFTSHTAAATA 62
Query: 328 LRMLNGTQLGGQNIRLSWGRSPSNK 352
L +N + + ++++W SP N+
Sbjct: 63 LAAMNKRVVLDKEMKVNWATSPGNQ 87
>gi|449267712|gb|EMC78625.1| Nucleolysin TIA-1 isoform p40, partial [Columba livia]
Length = 361
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 135/270 (50%), Gaps = 12/270 (4%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F+ G K+I + T + Y F+EF A L N
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAAMN 58
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
G + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A + A
Sbjct: 59 GRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRISDA 115
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNS 264
+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K S +
Sbjct: 116 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYEA 175
Query: 265 QVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 317
Q D P+N TV+ G + S +T++ +R+ FS +GQ++ +++ K FV+
Sbjct: 176 NTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVR 235
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
F A A+ +NGT + G ++ WG+
Sbjct: 236 FNSHESAAHAIVSVNGTTIEGHIVKCYWGK 265
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G + +V+++ TG+ +GYGF+
Sbjct: 73 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 132
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDD 170
F ++ AE +Q G + G + R NWA S+ +
Sbjct: 133 SFFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKSTYEANTKQLSYDEVVNQSS 190
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G + + +T+ ++++TF + + +V D KGY FVRF
Sbjct: 191 PSNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAA 243
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 244 HAIVSVNGT 252
>gi|225713382|gb|ACO12537.1| tRNA selenocysteine-associated protein 1 [Lepeophtheirus salmonis]
gi|290463033|gb|ADD24564.1| tRNA selenocysteine 1-associated protein 1 [Lepeophtheirus
salmonis]
Length = 257
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 102/178 (57%), Gaps = 13/178 (7%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGE--VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
LWIG L+ +MDE ++ A GE ++++KVI+NK TG YGFI F + A +
Sbjct: 7 LWIGGLEPYMDEEFIRNSLALMGEDKIISIKVIKNKFTGVPASYGFINFEDDSCALMAMH 66
Query: 142 TFNGTPMPNGE--QNFRLNWAS--FGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG +PN F+LN S GEK D +I+VGDL DV D L + F +R
Sbjct: 67 KLNGKIIPNSTPPVRFKLNHNSTRLMPGEK-----DSSIWVGDLTPDVDDLTLFKFFSSR 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNK 254
+ S K AKVV+D+ +G +KGYGF+RFG+E EQ A+ M GV +P+++ A K
Sbjct: 122 FQSIKSAKVVLDQ-SGFSKGYGFIRFGNEQEQQSALISMMGVSGLGAKPIKVSLAIPK 178
>gi|387762942|ref|NP_001248687.1| TIA1 cytotoxic granule-associated RNA binding protein [Macaca
mulatta]
gi|84579193|dbj|BAE73030.1| hypothetical protein [Macaca fascicularis]
gi|355565763|gb|EHH22192.1| hypothetical protein EGK_05415 [Macaca mulatta]
gi|355751389|gb|EHH55644.1| hypothetical protein EGM_04890 [Macaca fascicularis]
gi|380816026|gb|AFE79887.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|383421173|gb|AFH33800.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|384949108|gb|AFI38159.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
Length = 386
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 154/317 (48%), Gaps = 34/317 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSASYQNSQVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
AT K S S Q D P+N TV+ G + S +T++ +R+ FS +GQ++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ-- 355
+++ K FV+F A A+ +NGT + G ++ WG+ +P +Q Q
Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIG 301
Query: 356 -PDP-NQWNAGYYGYAQ 370
P P QW +YG AQ
Sbjct: 302 YPQPYGQWGQ-WYGNAQ 317
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 10/184 (5%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
A+ MNG + +++ AT + +S V + ++ VFVG+L +
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEI 117
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ I
Sbjct: 118 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 177
Query: 342 RLSW 345
R +W
Sbjct: 178 RTNW 181
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|84579137|dbj|BAE73002.1| hypothetical protein [Macaca fascicularis]
Length = 385
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 158/340 (46%), Gaps = 31/340 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSASYQNSQVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
AT K S S Q D P+N TV+ G + S +T++ +R+ FS +GQ++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNA 363
+++ K FV+F A A+ +NGT + G ++ WG+ + NQ
Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQNQ--- 298
Query: 364 GYYGYAQGYENYGYAAAAPQDPSMYY-GGY--PGYGNYQQ 400
GY Q Y +G Q Y G+ P YG Y Q
Sbjct: 299 --IGYPQPYGQWGQWYGNAQQIGQYTPNGWQVPAYGMYGQ 336
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 10/184 (5%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
A+ MNG + +++ AT + +S V + ++ VFVG+L +
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEI 117
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ I
Sbjct: 118 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 177
Query: 342 RLSW 345
R +W
Sbjct: 178 RTNW 181
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|66472532|ref|NP_001018445.1| tRNA selenocysteine 1-associated protein 1 [Danio rerio]
gi|82228819|sp|Q503H1.1|TSAP1_DANRE RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName:
Full=tRNA selenocysteine-associated protein 1
gi|63102413|gb|AAH95331.1| Zgc:110606 [Danio rerio]
gi|182888884|gb|AAI64339.1| Zgc:110606 protein [Danio rerio]
Length = 314
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 110/203 (54%), Gaps = 8/203 (3%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +LW+G+L+ +MDE ++ FA GE VV +++IR+K TG+ GYGF+E ER
Sbjct: 1 MNSLWMGNLEPYMDEDFICRAFAQMGETVVKIRLIRDKITGKNAGYGFVELADDTAVERC 60
Query: 140 LQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
L+ NG P+P + F+L+ +++G K+ ++ ++FV DL DV D ML E F
Sbjct: 61 LRKVNGKPLPGATPPKRFKLSRSNYG---KQGESSTFSLFVSDLTPDVDDGMLYEFFHYH 117
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNKKT 256
+ S K+V+D G +K GFV F E EQ RA+ ++ G + +R+ A+++
Sbjct: 118 FSSCCSGKIVLDA-NGHSKCCGFVSFESEREQKRALVDLQGATGLGKKALRLSLASSRVN 176
Query: 257 VSASYQNSQVAQSDDDPNNTTVF 279
+Q+ Q D N +
Sbjct: 177 KKKESSENQIWQYHSDSKNASFI 199
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 17/194 (8%)
Query: 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
+++++G+L + + + F + +++ D++TG+ GYGFV D++ R +
Sbjct: 2 NSLWMGNLEPYMDEDFICRAFAQMGETVVKIRLIRDKITGKNAGYGFVELADDTAVERCL 61
Query: 234 TEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG +P+ + +S S Q S ++FV +L V D L
Sbjct: 62 RKVNG-----KPLPGATPPKRFKLSRSNYGKQGESS-----TFSLFVSDLTPDVDDGMLY 111
Query: 294 ELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSWG 346
E F + G++V K CGFV F + AL L G T LG + +RLS
Sbjct: 112 EFFHYHFSSCCSGKIVLDANGHSKCCGFVSFESEREQKRALVDLQGATGLGKKALRLSLA 171
Query: 347 RSPSNKQAQPDPNQ 360
S NK+ + NQ
Sbjct: 172 SSRVNKKKESSENQ 185
>gi|289740797|gb|ADD19146.1| RNA-binding protein ELAV/HU [Glossina morsitans morsitans]
Length = 343
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 105/178 (58%), Gaps = 12/178 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE V+++RNK TG+ GY F+ F + A +
Sbjct: 9 LWMGSLEPYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFATDEQAMDAMHK 68
Query: 143 FNGTPMP--NGEQNFRLNWASFGA---GEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG P+P N FRLN AS G +R+ +++VGDL++DV DY L + F ++
Sbjct: 69 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE----FSVWVGDLSSDVDDYQLYKVFSSK 124
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
Y S K AKV++D +G +KGYGFVRFG E EQ A+ +MNG + T+P++I A K
Sbjct: 125 YTSIKTAKVILDS-SGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK 181
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 100/237 (42%), Gaps = 34/237 (14%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L +T+ + FR +++ ++ TG GY FV F + + + AM +
Sbjct: 9 LWMGSLEPYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFATDEQAMDAMHK 68
Query: 236 MNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNT---TVFVGNLDSIVTDEHL 292
+NG +P+ P TN ++ + + S P N +V+VG+L S V D L
Sbjct: 69 LNG-----KPI---PGTNPI---VRFRLNSASNSYKLPGNEREFSVWVGDLSSDVDDYQL 117
Query: 293 RELF-SQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLSW 345
++F S+Y + K+ K GFV+F + AL +NG LG + I++
Sbjct: 118 YKVFSSKYTSIKTAKVILDSSGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKIC- 176
Query: 346 GRSPSNKQAQPDPNQWNAGYYGYAQG-YENYGYAAAAPQDPSMYYGGYPGYGNYQQP 401
A P P G A G NYGY +A + S Y Y P
Sbjct: 177 -------NAVPKPKN----ELGVALGTTSNYGYGGSANANTSTTTVSGTDYSQYYDP 222
>gi|225713880|gb|ACO12786.1| Nucleolysin TIAR [Lepeophtheirus salmonis]
Length = 352
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 142/287 (49%), Gaps = 26/287 (9%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++G+L + E + F G V K+IR G + Y F+EF A A L
Sbjct: 11 RTLYVGNLDVAVTEDLVLALFGQLGAVKGCKIIRE---GASDPYCFVEFAHPASAAAALT 67
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGE----------KRDDTPDHTIFVGDLAADVTDYMLQ 191
N E ++NWAS G K D + H IFVGDL+ D+T L+
Sbjct: 68 AMNKRICLGKE--MKVNWASSPGGSSDSVVHHNLPKPDTSQHHHIFVGDLSPDITTETLK 125
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
F + KVV D LT ++KGYGFV F ++++ A+ +MNG + +R +R A
Sbjct: 126 NVF-VPFGEISDYKVVKDMLTNKSKGYGFVSFVEKNDAQTAIEQMNGQWLGSRAIRTNWA 184
Query: 252 T-------NKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEH-LRELFSQYGQLV 303
+K T + + N + P N TV+ G L I +DE+ +R+ FS +G+++
Sbjct: 185 ARKPPAPYSKDTSNVNKLNFEDVYRQASPRNFTVYCGGL--INSDENIIRQTFSPFGRIL 242
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
++ K FV+F ++ A A+ L+G+ + GQ+++ SWG+ +
Sbjct: 243 EIRYFRDKGYAFVRFDNKESACNAIVALHGSNVQGQSVKCSWGKEST 289
>gi|441599875|ref|XP_004087575.1| PREDICTED: nucleolysin TIAR isoform 2 [Nomascus leucogenys]
gi|441599878|ref|XP_003255076.2| PREDICTED: nucleolysin TIAR isoform 1 [Nomascus leucogenys]
gi|119569773|gb|EAW49388.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_d [Homo sapiens]
Length = 353
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 15/263 (5%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 28 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 85
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 86 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 144
Query: 245 PMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFS 297
+R AT K S Q + Q + P N TV+ G + S +TD+ +R+ FS
Sbjct: 145 QIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFS 204
Query: 298 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA-- 354
+GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP +
Sbjct: 205 PFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQ 264
Query: 355 QPDPNQWN--AGYYGYAQGYENY 375
Q D +QW + YG Q Y Y
Sbjct: 265 QVDYSQWGQWSQVYGNPQQYGQY 287
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 62 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 121
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 122 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 179
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 180 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 232
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 233 HAIVSVNGT 241
>gi|417410268|gb|JAA51610.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 382
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 15/263 (5%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 56 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 113
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 114 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 172
Query: 245 PMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFS 297
+R AT K S Q + Q + P N TV+ G + S +TD+ +R+ FS
Sbjct: 173 QIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFS 232
Query: 298 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA-- 354
+GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP +
Sbjct: 233 PFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQ 292
Query: 355 QPDPNQWN--AGYYGYAQGYENY 375
Q D +QW + YG Q Y Y
Sbjct: 293 QVDYSQWGQWSQVYGNPQQYGQY 315
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 90 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 149
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 150 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 207
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 208 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 260
Query: 231 RAMTEMNG 238
A+ +NG
Sbjct: 261 HAIVSVNG 268
>gi|355562824|gb|EHH19418.1| hypothetical protein EGK_20118, partial [Macaca mulatta]
gi|355766617|gb|EHH62534.1| hypothetical protein EGM_20905, partial [Macaca fascicularis]
gi|440900070|gb|ELR51281.1| Nucleolysin TIAR, partial [Bos grunniens mutus]
Length = 381
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 15/263 (5%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 56 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 113
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 114 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 172
Query: 245 PMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFS 297
+R AT K S Q + Q + P N TV+ G + S +TD+ +R+ FS
Sbjct: 173 QIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFS 232
Query: 298 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA-- 354
+GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP +
Sbjct: 233 PFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQ 292
Query: 355 QPDPNQWN--AGYYGYAQGYENY 375
Q D +QW + YG Q Y Y
Sbjct: 293 QVDYSQWGQWSQVYGNPQQYGQY 315
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 90 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 149
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 150 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 207
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF P + +++ KGY FVRF
Sbjct: 208 PKNCTVYCGGIASGLTDQLMRQTFS---PFGQ----IMEIRVFPEKGYSFVRFSTHESAA 260
Query: 231 RAMTEMNG 238
A+ +NG
Sbjct: 261 HAIVSVNG 268
>gi|357626972|gb|EHJ76844.1| tRNA selenocysteine associated protein [Danaus plexippus]
Length = 282
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 100/173 (57%), Gaps = 5/173 (2%)
Query: 86 IGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
+G L+ M E+++ F G+ +AVKV+RNK TG+ GY F+ F + A + N
Sbjct: 1 MGSLEPNMTESFILAAFHRMGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDTMHKLN 60
Query: 145 GTPMPNG--EQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
G P+P FRLN AS A + +++VGDL+ADV DY L F A+Y S K
Sbjct: 61 GKPIPGTFPVVRFRLNTASREARANMQQEREFSVWVGDLSADVDDYSLYRVFAAKYSSIK 120
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNK 254
AKV++D +G TKGYGFVRFG+E EQ A+ MNG ++P++I A K
Sbjct: 121 TAKVILDS-SGYTKGYGFVRFGNEDEQRNALYAMNGYTGLGSKPLKICTAVPK 172
>gi|146420743|ref|XP_001486325.1| hypothetical protein PGUG_01996 [Meyerozyma guilliermondii ATCC
6260]
Length = 397
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 142/309 (45%), Gaps = 51/309 (16%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
L++G++ ++E YL+ F T +VK++ +K Y F+EF +R AE VL
Sbjct: 79 VLYVGNIPKTVNEQYLHELFDKTK---SVKLLHDKNKPGFN-YAFVEFDTREDAESVLTA 134
Query: 143 FNGTPMPNGEQNFRLNWA---SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
FNG+ + G + ++NWA S + + P +TIFVGDL+A+V D L + F ++P
Sbjct: 135 FNGSEV--GGSSIKINWAYQLSTISTSSSPELPLYTIFVGDLSAEVDDETLGKAFD-QFP 191
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN------ 253
S K A V+ D T R++GYGFV F D +E A+ M G+F R +R A++
Sbjct: 192 SRKQAHVMWDMQTSRSRGYGFVSFADPAEAENALVTMPGLFIGGRAIRCNWASHRHMYQK 251
Query: 254 -------KKTVSASYQNSQVAQSDD----DPNN------------------------TTV 278
K++ SA + + D NN TTV
Sbjct: 252 KNTRPPPKRSASAGATTPPLPYTAQGYPIDTNNGGRNPQPQAPKSFEVVLRQAPNWQTTV 311
Query: 279 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 338
++GN+ L L +G +V K K C FV++ A A+ L G + G
Sbjct: 312 YLGNIAHFTHLSDLIPLLQNFGFIVDFKFHPSKGCAFVKYDSHERAALAIVQLAGYSVNG 371
Query: 339 QNIRLSWGR 347
+ ++ WGR
Sbjct: 372 RPLKCGWGR 380
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 81/182 (44%), Gaps = 19/182 (10%)
Query: 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
+ + ++VG++ V + L E F TK K++ D+ Y FV F +
Sbjct: 74 EISNTVLYVGNIPKTVNEQYLHELF----DKTKSVKLLHDK-NKPGFNYAFVEFDTREDA 128
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTD 289
+T NG ++I A T+S S S + T+FVG+L + V D
Sbjct: 129 ESVLTAFNGSEVGGSSIKINWAYQLSTISTS--------SSPELPLYTIFVGDLSAEVDD 180
Query: 290 EHLRELFSQY--GQLVHV----KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRL 343
E L + F Q+ + HV + + GFV FAD + AE AL + G +GG+ IR
Sbjct: 181 ETLGKAFDQFPSRKQAHVMWDMQTSRSRGYGFVSFADPAEAENALVTMPGLFIGGRAIRC 240
Query: 344 SW 345
+W
Sbjct: 241 NW 242
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 274 NNTTVFVGNLDSIVTDEHLRELF--SQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
+NT ++VGN+ V +++L ELF ++ +L+H K G FV+F R AE L
Sbjct: 76 SNTVLYVGNIPKTVNEQYLHELFDKTKSVKLLHDKNKPGFNYAFVEFDTREDAESVLTAF 135
Query: 332 NGTQLGGQNIRLSWGRSPSNKQAQPDP 358
NG+++GG +I+++W S P
Sbjct: 136 NGSEVGGSSIKINWAYQLSTISTSSSP 162
>gi|332808237|ref|XP_001141981.2| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Pan
troglodytes]
Length = 255
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 109/186 (58%), Gaps = 35/186 (18%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LW+GDL+ +MDE +++ FA GE V++VK+IRN+ TG
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGPA------------------- 44
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
+ F+LN+A++G ++ D++P++++FVGDL DV D ML E F YPS
Sbjct: 45 -----------KRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSC 91
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNKKTVSAS 260
+G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++P+R+ A K +
Sbjct: 92 RGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASRVKP 150
Query: 261 YQNSQV 266
+ SQ+
Sbjct: 151 VEYSQM 156
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 58/132 (43%), Gaps = 15/132 (11%)
Query: 223 FGDESEQLRAMTEMNGVFCSTRPMR---IGPATNKKTVSASYQNSQVAQSDDDPNNTTVF 279
+ DE+ RA M S + +R GPA K A+Y Q D+ P ++F
Sbjct: 13 YMDENFISRAFATMGETVMSVKIIRNRLTGPAKRFKLNYATYGK----QPDNSP-EYSLF 67
Query: 280 VGNLDSIVTDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG 333
VG+L V D L E F + G++V + K GFV+F D + AL G
Sbjct: 68 VGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQG 127
Query: 334 -TQLGGQNIRLS 344
LG + +RLS
Sbjct: 128 AVGLGSKPVRLS 139
>gi|431895395|gb|ELK04911.1| Nucleolysin TIAR [Pteropus alecto]
Length = 428
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 150/318 (47%), Gaps = 30/318 (9%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK---------------QTGQIEGYGFIE 129
++G+L + E + F+ G + K+I + Q + Y F+E
Sbjct: 48 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 107
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYM 189
F A L NG + E ++NWA+ + +K+D + +FVGDL+ ++T
Sbjct: 108 FYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTED 165
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +R
Sbjct: 166 IKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN 224
Query: 250 PATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL 302
AT K S Q + Q + P N TV+ G + S +TD+ +R+ FS +GQ+
Sbjct: 225 WATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQI 284
Query: 303 VHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPN 359
+ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP + Q D +
Sbjct: 285 MEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTAIEGHVVKCYWGKESPDMTKNFQQVDYS 344
Query: 360 QWN--AGYYGYAQGYENY 375
QW + YG Q Y Y
Sbjct: 345 QWGQWSQVYGNPQQYGQY 362
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 137 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 196
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 197 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 254
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF S G +++ KGY FVRF
Sbjct: 255 PKNCTVYCGGIASGLTDQLMRQTF-----SPFGQ--IMEIRVFPEKGYSFVRFSTHESAA 307
Query: 231 RAMTEMNG 238
A+ +NG
Sbjct: 308 HAIVSVNG 315
>gi|392586871|gb|EIW76206.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 876
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 109/214 (50%), Gaps = 42/214 (19%)
Query: 83 TLWIGDLQYWMDETYLN-TCFAHTGEVVAVKV----IRNKQTGQIEGYGFIEFISRAGAE 137
TLW GDL+ WMDE Y C + V +KV N Q GY F+ F S + A
Sbjct: 183 TLWWGDLEPWMDEEYAKQVCTLMNWDPVNIKVPAGSDANGQHANNPGYCFLTFSSPSVAA 242
Query: 138 RVLQTFN--GTP----MPNGEQNFRLNWASF-----------GAGEKRDDTP-----DHT 175
VL N G P MPN + F +NWA+ AG P +++
Sbjct: 243 SVLNQVNSDGAPQSPTMPNSTKPFTMNWATTMPGACVPSLHSAAGVPLIAQPQQYQKEYS 302
Query: 176 IFVGDLAADVTDYMLQETFRA--------RYP-------STKGAKVVIDRLTGRTKGYGF 220
IFVGDLA + ++ L FR R P S K AK+++D +TG ++GYGF
Sbjct: 303 IFVGDLAPETSNSDLVAVFRNPVLGLRNDREPKFIRPFLSCKSAKIMLDPVTGVSRGYGF 362
Query: 221 VRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
VRF DE++Q RA+ EM+G++C +RPMRI PAT K
Sbjct: 363 VRFTDETDQQRALVEMHGLYCLSRPMRISPATAK 396
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 54/77 (70%)
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
DP NTTVFVG L ++++E LR F+ +G + +VK+P GK CGFVQF ++ AE A+ +
Sbjct: 574 DPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPIGKHCGFVQFVRKADAERAIEKM 633
Query: 332 NGTQLGGQNIRLSWGRS 348
G +GG IRLSWGRS
Sbjct: 634 QGFPIGGSRIRLSWGRS 650
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA G++ VKV K G F++F+ +A AER ++
Sbjct: 579 TVFVGGLSPLISEETLRTFFAPFGDIHYVKVPIGKHCG------FVQFVRKADAERAIEK 632
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 633 MQGFPI--GGSRIRLSW 647
>gi|308480880|ref|XP_003102646.1| hypothetical protein CRE_03259 [Caenorhabditis remanei]
gi|308261080|gb|EFP05033.1| hypothetical protein CRE_03259 [Caenorhabditis remanei]
Length = 358
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 106/186 (56%), Gaps = 5/186 (2%)
Query: 166 EKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFG 224
E R DT H +FVGDL+ DV++ +L+ TF+ +Y AKV+ D T ++KGYGFV F
Sbjct: 124 EMRIDTSKHFHVFVGDLSKDVSNELLKSTFQ-KYGEVSEAKVIRDAQTQKSKGYGFVSFP 182
Query: 225 DESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNS--QVAQSDDDPNNTTVFVGN 282
++ A+ MNG + R +R A K + + + QV S +NT+V+VGN
Sbjct: 183 NKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTK-ADNTSVYVGN 241
Query: 283 LDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ T+ LRE FS YG + V++ +R FV++ + CA +A+ +NG +L G +R
Sbjct: 242 ISQQTTETDLRESFSTYGDIAEVRVFKTQRYAFVRYDKKECATKAIMEMNGKELTGNQVR 301
Query: 343 LSWGRS 348
SWGR+
Sbjct: 302 CSWGRT 307
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 21/167 (12%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL + L + F GEV KVIR+ QT + +GYGF+ F ++ AE +
Sbjct: 135 VFVGDLSKDVSNELLKSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAIAGM 194
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDD------------TPDHTIFVGDLAADVTDYMLQ 191
NG + G++ R NWA+ E+ D + +++VG+++ T+ L+
Sbjct: 195 NGKWI--GKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTETDLR 252
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
E+F ST G + + +T+ Y FVR+ + +A+ EMNG
Sbjct: 253 ESF-----STYGD--IAEVRVFKTQRYAFVRYDKKECATKAIMEMNG 292
>gi|149392334|gb|ABR25993.1| nucleic acid binding protein [Oryza sativa Indica Group]
Length = 128
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 89/127 (70%), Gaps = 6/127 (4%)
Query: 277 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQL 336
TV+VG LD V+++ LR+ F++YG + VKIP GK+CGFVQF R+ AEEAL+ LNG+ +
Sbjct: 1 TVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVI 60
Query: 337 GGQNIRLSWGRSPSNKQAQPDP-NQWNAGYYGYAQGYENYGYAAAAPQDPSMY---YGGY 392
G Q +RLSWGRSPS+KQ++ D ++ N YYG Y YGYA+ P P+MY YG Y
Sbjct: 61 GKQAVRLSWGRSPSHKQSRADSGSRRNNMYYG-TPFYGGYGYASPVPH-PNMYAAAYGAY 118
Query: 393 PGYGNYQ 399
P YG+ Q
Sbjct: 119 PVYGSQQ 125
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L FA G+V +VK+ KQ GF++F+SR AE LQ
Sbjct: 1 TVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQC------GFVQFVSRTDAEEALQG 54
Query: 143 FNGTPMPNGEQNFRLNW 159
NG+ + G+Q RL+W
Sbjct: 55 LNGSVI--GKQAVRLSW 69
>gi|189208127|ref|XP_001940397.1| nucleolysin TIA-1 isoform p40 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976490|gb|EDU43116.1| nucleolysin TIA-1 isoform p40 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 470
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 139/314 (44%), Gaps = 60/314 (19%)
Query: 76 GQPGEI----------RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE-- 123
GQPG + R L++G L + E L F TG V +VK+I +K
Sbjct: 67 GQPGYVPRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFN 126
Query: 124 ----GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFV 178
YGF+E+ AER + T NG + N E DT +H IFV
Sbjct: 127 SKGFNYGFVEYDDPGAAERGMATLNGRRIHNNE-----------------DTSNHFHIFV 169
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
GDL+ +V D +L + F P ++ A+V+ D TGR++GYGFV F D ++ RA++ M+G
Sbjct: 170 GDLSNEVNDEVLLQAFSTFGPVSE-ARVMWDMKTGRSRGYGFVAFRDRADADRALSSMDG 228
Query: 239 VFCSTRPMRIGPATNKKTVSASYQNSQVA-------------------QSDD-----DPN 274
+ +R +R A K S S Q + + QS D P
Sbjct: 229 EWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPA 288
Query: 275 -NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG 333
TT +VGNL + L LF +G + + + + F++ A A+ LNG
Sbjct: 289 WQTTCYVGNLTPYTSQSDLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMAICQLNG 348
Query: 334 TQLGGQNIRLSWGR 347
+ G+ ++ SWG+
Sbjct: 349 YNVNGRPLKCSWGK 362
>gi|387017378|gb|AFJ50807.1| Nucleolysin TIA-1 isoform p40 [Crotalus adamanteus]
Length = 392
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 158/317 (49%), Gaps = 34/317 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVNTLRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTV-SASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
AT K ++Y+++ S DD P+N TV+ G + S +T++ +R+ FS +GQ++
Sbjct: 182 ATRKPPAPKSTYESNAKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ-- 355
+++ K FV+F A A+ +NGT + G ++ WG+ +P +Q Q
Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETPDMINPIQQQNQVG 301
Query: 356 --PDPNQWNAGYYGYAQ 370
P QW +YG AQ
Sbjct: 302 YPPPYGQWGQ-WYGSAQ 317
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 10/184 (5%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFYEHR 57
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
A+ MNG + +++ AT + +S V + ++ VFVG+L +
Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVNTLRSQDHFHVFVGDLSPEI 117
Query: 288 TDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
T E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ I
Sbjct: 118 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 177
Query: 342 RLSW 345
R +W
Sbjct: 178 RTNW 181
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|365985359|ref|XP_003669512.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
gi|343768280|emb|CCD24269.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 139/267 (52%), Gaps = 18/267 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V +++V R+ T GY ++ F ++ ++
Sbjct: 41 SLYVGDLDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKKAIEK 100
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ + R+ W+ ++ + + IF+ +L +D+ + L +TF + +
Sbjct: 101 LNYTPIKG--RLCRIMWSQRDPALRKKGSAN--IFIKNLHSDIDNKALYDTFSV-FGNIL 155
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
+K+ D TG++KG+GFV F D++ A+ +NG+ + + + +GP ++K +
Sbjct: 156 SSKIATDE-TGKSKGFGFVHFEDDTAAKEAIDALNGMLLNGQEIFVGPHLSRKE-----R 209
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG-----KRCGFVQ 317
+SQ+ +S N T ++V N++ TDE ELFS+YG+++ + K GFV
Sbjct: 210 DSQLEES--KANFTNIYVKNINLETTDEEFTELFSKYGKVLSAALEKTEDGKLKGFGFVD 267
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLS 344
F + A +A+ LNG+Q Q + +S
Sbjct: 268 FENHEDAAKAVEELNGSQFKDQELFVS 294
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 24/262 (9%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ K+ + +TG+ +G+GF+ F A+ +
Sbjct: 130 IFIKNLHSDIDNKALYDTFSVFGNILSSKIATD-ETGKSKGFGFVHFEDDTAAKEAIDAL 188
Query: 144 NGTPMPNGEQNF---RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG + NG++ F L+ + + I+V ++ + TD E F
Sbjct: 189 NGMLL-NGQEIFVGPHLSRKERDSQLEESKANFTNIYVKNINLETTDEEFTELF------ 241
Query: 201 TKGAKVVIDRLT----GRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK-- 254
+K KV+ L G+ KG+GFV F + + +A+ E+NG + + + A K
Sbjct: 242 SKYGKVLSAALEKTEDGKLKGFGFVDFENHEDAAKAVEELNGSQFKDQELFVSRAQKKYE 301
Query: 255 --KTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PA 309
+ + Y+ S++ + +F+ NLD + DE L+E F+ YG + V++
Sbjct: 302 RMQELKKQYEASRLEKMAK-YQGVNLFIKNLDDSIDDEKLKEEFAPYGNITSVRVMRTEN 360
Query: 310 GKRCGFVQFADRSCAEEALRML 331
GK GF F S EEA + +
Sbjct: 361 GKSRGF-GFVCFSTPEEATKAI 381
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 29/198 (14%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+++VGDL V++ +L + F + S +V D +T + GY +V F D +A+
Sbjct: 41 SLYVGDLDPSVSEALLYDIF-SPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKKAIE 99
Query: 235 EMN-----GVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTD 289
++N G C + PA KK + +F+ NL S + +
Sbjct: 100 KLNYTPIKGRLCRIMWSQRDPALRKK------------------GSANIFIKNLHSDIDN 141
Query: 290 EHLRELFSQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 344
+ L + FS +G ++ KI K GFV F D + A+EA+ LNG L GQ I +
Sbjct: 142 KALYDTFSVFGNILSSKIATDETGKSKGFGFVHFEDDTAAKEAIDALNGMLLNGQEIFVG 201
Query: 345 WGRSPSNKQAQPDPNQWN 362
S + +Q + ++ N
Sbjct: 202 PHLSRKERDSQLEESKAN 219
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 22/198 (11%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++ ++ + F+ G+V++ + + G+++G+GF++F + A + ++
Sbjct: 223 IYVKNINLETTDEEFTELFSKYGKVLSA-ALEKTEDGKLKGFGFVDFENHEDAAKAVEEL 281
Query: 144 NGTPMPNGE-------------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYML 190
NG+ + E Q + + + EK +F+ +L + D L
Sbjct: 282 NGSQFKDQELFVSRAQKKYERMQELKKQYEA-SRLEKMAKYQGVNLFIKNLDDSIDDEKL 340
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+E F A Y + +V+ G+++G+GFV F E +A+TE N + +P+ +
Sbjct: 341 KEEF-APYGNITSVRVMRTE-NGKSRGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAI 398
Query: 251 ATNKKTVSASYQNSQVAQ 268
A K + SQ+AQ
Sbjct: 399 AQRKDV-----RRSQLAQ 411
>gi|297725721|ref|NP_001175224.1| Os07g0516900 [Oryza sativa Japonica Group]
gi|255677810|dbj|BAH93952.1| Os07g0516900, partial [Oryza sativa Japonica Group]
Length = 92
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 64/77 (83%)
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
LA+DVTD ML+E F+ YPS +GAKVV D++TGR+KGYGFVRFGDE+EQ RAMTEMNG
Sbjct: 1 LASDVTDSMLEEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGAT 60
Query: 241 CSTRPMRIGPATNKKTV 257
STR MR+GPA NKK +
Sbjct: 61 LSTRQMRLGPAANKKNM 77
>gi|341903554|gb|EGT59489.1| CBN-TIAR-3 protein [Caenorhabditis brenneri]
Length = 417
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 110/198 (55%), Gaps = 11/198 (5%)
Query: 166 EKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFG 224
E R DT H +FVGDL+ DV++ +L+ TF+ +Y AKV+ D T ++KGYGFV F
Sbjct: 183 EMRIDTSKHFHVFVGDLSKDVSNDLLKSTFQ-KYGEVSEAKVIRDAQTQKSKGYGFVSFP 241
Query: 225 DESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNS--QVAQSDDDPNNTTVFVGN 282
++ A+ MNG + R +R A K + + + QV S +NT+V+VGN
Sbjct: 242 NKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTK-ADNTSVYVGN 300
Query: 283 LDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ TD LR+ FS YG + V++ +R FV++ + CA +A+ +NG ++ G +R
Sbjct: 301 ISQQTTDADLRDSFSTYGDIAEVRVFKTQRYAFVRYDKKECATKAIMEMNGKEMAGNQVR 360
Query: 343 LSWGRSPSNKQAQPDPNQ 360
SWGR+ Q PNQ
Sbjct: 361 CSWGRT------QAVPNQ 372
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 21/167 (12%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL + L + F GEV KVIR+ QT + +GYGF+ F ++ AE +
Sbjct: 194 VFVGDLSKDVSNDLLKSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAIAGM 253
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDD------------TPDHTIFVGDLAADVTDYMLQ 191
NG + G++ R NWA+ E+ D + +++VG+++ TD L+
Sbjct: 254 NGKWI--GKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLR 311
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
++F ST G + + +T+ Y FVR+ + +A+ EMNG
Sbjct: 312 DSF-----STYGD--IAEVRVFKTQRYAFVRYDKKECATKAIMEMNG 351
>gi|449445890|ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 654
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 144/285 (50%), Gaps = 22/285 (7%)
Query: 56 WATQAAA-PQAAGVAVPPQQQGQPGEIRT-LWIGDLQYWMDETYLNTCFAHTGEVVAVKV 113
ATQ A PQ A + P G + T L++GDL + ++ L F G+VV+V+V
Sbjct: 1 MATQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
Query: 114 IRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPD 173
R+ T + GYG++ + + A R L N TP+ NG+ R+ ++ ++ +
Sbjct: 61 CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPL-NGKP-IRVMYSHRDPSIRKSGAGN 118
Query: 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
IF+ +L + L +TF A + S KV +D +G++KGYGFV+F +E L+A+
Sbjct: 119 --IFIKNLDKAIDHKALHDTFSA-FGSILSCKVALDS-SGQSKGYGFVQFDNEESALKAI 174
Query: 234 TEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
++NG+ + + + +GP K+ S+ NN VFV NL T+E L
Sbjct: 175 EKLNGMLLNDKQVYVGPFLRKQERDGVVDKSKF-------NN--VFVKNLSETTTEEDLN 225
Query: 294 ELFSQYGQLVHVKI---PAGK-RC-GFVQFADRSCAEEALRMLNG 333
+ FS++G L + + GK RC GFV F + A A+ LNG
Sbjct: 226 KAFSEFGTLTSIVVMRDADGKSRCFGFVNFENADDAARAVDTLNG 270
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 140/284 (49%), Gaps = 19/284 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L+ F+ G +++ KV + +GQ +GYGF++F + A + ++
Sbjct: 119 IFIKNLDKAIDHKALHDTFSAFGSILSCKVALD-SSGQSKGYGFVQFDNEESALKAIEKL 177
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT----IFVGDLAADVTDYMLQETFRARYP 199
NG + N +Q + F ++RD D + +FV +L+ T+ L + F
Sbjct: 178 NGMLL-NDKQVY---VGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEF-- 231
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--KTV 257
T + VV+ G+++ +GFV F + + RA+ +NG + +G A K + V
Sbjct: 232 GTLTSIVVMRDADGKSRCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREV 291
Query: 258 SASYQNSQ-VAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAG--K 311
++ Q + ++ D +++ NLD + D+ L+ELF+ +G + K+ P G +
Sbjct: 292 ELKHRFEQTMKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISR 351
Query: 312 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV F+ A AL +NG + + + ++ + +++A+
Sbjct: 352 GSGFVAFSTPDEASRALVEMNGKMVVSKPLYVALAQRKEDRRAR 395
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 27/201 (13%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L E LN F+ G + ++ V+R+ G+ +GF+ F + A R
Sbjct: 206 KFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDAD-GKSRCFGFVNFENADDAARA 264
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEK--RDDTPDH----------------TIFVGDL 181
+ T NG + + E W A +K R+ H +++ +L
Sbjct: 265 VDTLNGKLVDDKE------WYVGKAQKKSEREVELKHRFEQTMKEAADKYQGANLYIKNL 318
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
+ D L+E F A + + KV+ D G ++G GFV F E RA+ EMNG
Sbjct: 319 DDSIGDDKLKELF-APFGTITSCKVMRDP-NGISRGSGFVAFSTPDEASRALVEMNGKMV 376
Query: 242 STRPMRIGPATNKKTVSASYQ 262
++P+ + A K+ A Q
Sbjct: 377 VSKPLYVALAQRKEDRRARLQ 397
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 53/86 (61%), Gaps = 7/86 (8%)
Query: 276 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP---AGKRC---GFVQFADRSCAEEALR 329
T+++VG+LD VTD L ++F+Q GQ+V V++ +R G+V +++ A AL
Sbjct: 29 TSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALD 88
Query: 330 MLNGTQLGGQNIRLSWG-RSPSNKQA 354
+LN T L G+ IR+ + R PS +++
Sbjct: 89 VLNFTPLNGKPIRVMYSHRDPSIRKS 114
>gi|281338083|gb|EFB13667.1| hypothetical protein PANDA_003438 [Ailuropoda melanoleuca]
Length = 340
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 15/263 (5%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 56 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 113
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 114 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 172
Query: 245 PMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFS 297
+R AT K S Q + Q + P N TV+ G + S +TD+ +R+ FS
Sbjct: 173 QIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFS 232
Query: 298 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQA-- 354
+GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+ SP +
Sbjct: 233 PFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQ 292
Query: 355 QPDPNQWN--AGYYGYAQGYENY 375
Q D +QW + YG Q Y Y
Sbjct: 293 QVDYSQWGQWSQVYGNPQQYGQY 315
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 90 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 149
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 150 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 207
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF S G +++ KGY FVRF
Sbjct: 208 PKNCTVYCGGIASGLTDQLMRQTF-----SPFGQ--IMEIRVFPEKGYSFVRFSTHESAA 260
Query: 231 RAMTEMNG 238
A+ +NG
Sbjct: 261 HAIVSVNG 268
>gi|392575524|gb|EIW68657.1| hypothetical protein TREMEDRAFT_71869 [Tremella mesenterica DSM
1558]
Length = 389
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 140/318 (44%), Gaps = 60/318 (18%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVI--RNKQTGQIEGYGFIEFISRAGAERVLQ 141
L++G+L + + L FA G VV K+I RN Q YGF+E+I AE+ +Q
Sbjct: 26 LYVGNLSPRVTDYMLTEIFAVAGPVVNAKIIQDRNFQHAGFN-YGFVEYIDMRSAEQAIQ 84
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
T NG + + E QN K D H +FVGDL+ +V D +L + F A +
Sbjct: 85 TLNGRKIFDAEVKQN------------KEDTQHHHHVFVGDLSPEVNDDVLAKAFGA-FG 131
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S A+V+ D +G+++GYGF+ F + +A+ MNG + +R +R+ A K +
Sbjct: 132 SMSEARVMWDMNSGKSRGYGFLSFRKREDAEQAINTMNGEWLGSRAIRVNWANQKTQTGS 191
Query: 260 SYQNS-------------QVAQSDDD-----------------------------PNNTT 277
S S Q+ S P+N T
Sbjct: 192 SGAYSSPSYTAPSYGHYPQLTSSPTPAAPIAPLAPVIPGVPPAGGVPAASATPVIPDNCT 251
Query: 278 VFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLG 337
+FVGNL VT L LF YG + +++ A + FV+ A A+ L T +
Sbjct: 252 LFVGNLGPYVTQAELTPLFQTYGYVTDIRMQADRGYAFVKLDTSQAAVSAMATLQNTMVQ 311
Query: 338 GQNIRLSWGRSPSNKQAQ 355
G+ +++ WGR + AQ
Sbjct: 312 GRPLKIQWGREKPAEAAQ 329
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 273 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-------PAGKRCGFVQFADRSCAE 325
P ++VGNL VTD L E+F+ G +V+ KI AG GFV++ D AE
Sbjct: 21 PKKPHLYVGNLSPRVTDYMLTEIFAVAGPVVNAKIIQDRNFQHAGFNYGFVEYIDMRSAE 80
Query: 326 EALRMLNGTQLGGQNIR 342
+A++ LNG ++ ++
Sbjct: 81 QAIQTLNGRKIFDAEVK 97
>gi|154269845|ref|XP_001535826.1| hypothetical protein HCAG_09244 [Ajellomyces capsulatus NAm1]
gi|150409464|gb|EDN04912.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 387
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 126/263 (47%), Gaps = 30/263 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L+IG L + E L F TG V +VK+I +K + + YGF+E+ AER +
Sbjct: 92 RALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSKGLN-YGFVEYDDPGAAERAMS 150
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
T NG + E R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 151 TLNGRRVHQSE--IRVNWAYQSNNNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 207
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D TGR++GYGFV F + + +A++ M+G + +R +R A K S S
Sbjct: 208 VSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 267
Query: 261 YQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLREL 295
Q + A QS D P TT +VGNL T L L
Sbjct: 268 QQQAMAAMGMTPSTPFGHHHFPTHGVQSYDMVAAQTPQWQTTCYVGNLTPYTTQNDLIPL 327
Query: 296 FSQYGQLVHVKIPAGKRCGFVQF 318
F +G +V + + FV+
Sbjct: 328 FQNFGYVVETRFQTDRGFRFVKM 350
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 22/194 (11%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L A VT+ +L++ F + K++ D+ + YGFV + D RAM+
Sbjct: 94 LYIGGLDARVTEDILRQIFETT-GHVQSVKIIPDK-NSKGLNYGFVEYDDPGAAERAMST 151
Query: 236 MNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 295
+NG +R+ A YQ S +D N+ +FVG+L + V DE L +
Sbjct: 152 LNGRRVHQSEIRVNWA---------YQ-SNNNNKEDTSNHFHIFVGDLSNEVNDEVLLQA 201
Query: 296 FSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP 349
FS +G + ++ + G FV F +R AE+AL ++G LG + IR +W
Sbjct: 202 FSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNW---- 257
Query: 350 SNKQAQPDPNQWNA 363
+N++ QP +Q A
Sbjct: 258 ANQKGQPSISQQQA 271
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-----PAGKRCGFVQFADRSCAEE 326
+PN +++G LD+ VT++ LR++F G + VKI G GFV++ D AE
Sbjct: 88 EPNKRALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAER 147
Query: 327 ALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYG----------YAQGYENYG 376
A+ LNG ++ IR++W +N + N ++ + G Q + +G
Sbjct: 148 AMSTLNGRRVHQSEIRVNWAYQSNNNNKEDTSNHFHI-FVGDLSNEVNDEVLLQAFSAFG 206
Query: 377 YAAAAPQDPSMYYGGYPGYG 396
+ A M G GYG
Sbjct: 207 SVSEARVMWDMKTGRSRGYG 226
>gi|22208507|gb|AAM94322.1| putative oligouridylate binding protein [Sorghum bicolor]
Length = 581
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 141/282 (50%), Gaps = 30/282 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + +T L F G V K+IR +++ +GFI++ R A +
Sbjct: 67 RSVYVGNISLQVTDTVLQEVFQSIGPVEGCKLIRKEKSS----FGFIDYYDRRYAALAIL 122
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
+ NG P+ Q ++NWA +R+DT H IFVGDL +VTD L F Y +
Sbjct: 123 SLNGRPLYG--QPIKVNWAY--TSTQREDTSGHFNIFVGDLCPEVTDATLFAFFSG-YST 177
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN------- 253
A+V+ D+ TGR++G+GFV F ++ + A+ ++NG + R +R AT
Sbjct: 178 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCNWATKGANAGEE 237
Query: 254 KKTVSASYQ--NSQVAQSDDDPNN---------TTVFVGNLDSIVTDEHLRELFSQY--G 300
K+ V + N ++PN TTV+VGNL T+ + F G
Sbjct: 238 KQIVDSKVDLTNGTSESGKENPNEDGPESNPQFTTVYVGNLPHEATNNDVHLFFHSLGAG 297
Query: 301 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ V++ K GFV+++ A +A++M NG +GG+ I+
Sbjct: 298 SIEEVRVTRDKGFGFVRYSTHEEAAQAIQMANGQLIGGRQIK 339
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 23/189 (12%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG+++ VTD +LQE F++ P +G K++ +GF+ + D
Sbjct: 62 DSSTCRSVYVGNISLQVTDTVLQEVFQSIGP-VEGCKLI----RKEKSSFGFIDYYDRRY 116
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ +NG RP+ P V+ +Y ++Q +D + +FVG+L VT
Sbjct: 117 AALAILSLNG-----RPLYGQPIK----VNWAYTSTQ---REDTSGHFNIFVGDLCPEVT 164
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ ++ G FV F ++ A+ A+ LNG LG + IR
Sbjct: 165 DATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIR 224
Query: 343 LSWGRSPSN 351
+W +N
Sbjct: 225 CNWATKGAN 233
>gi|294658145|ref|XP_002770728.1| DEHA2F02596p [Debaryomyces hansenii CBS767]
gi|202952907|emb|CAR66259.1| DEHA2F02596p [Debaryomyces hansenii CBS767]
Length = 747
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/219 (36%), Positives = 118/219 (53%), Gaps = 32/219 (14%)
Query: 64 QAAGVAVPPQQ---QGQPGEIRTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIR---- 115
Q + VA +Q GQP RTLW+GDL W+DE ++ + + V VK+I+
Sbjct: 88 QQSSVAAEKEQGSNTGQPDSPRTLWMGDLDPWLDEGAISDLWWQILHKKVTVKIIKPKTP 147
Query: 116 ----NKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMP---------------NGEQNFR 156
N Q GY F+EF S A++ L NG +P N ++ FR
Sbjct: 148 KPENNAQGLSHSGYCFVEFESFDDAQQAL-GLNGQLLPDIAMPSQQQFPNNPDNQKKYFR 206
Query: 157 LNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLTG 213
LNWAS GA TP++++FVGDL+A T+ L F+ +P S K +V+ D ++G
Sbjct: 207 LNWAS-GATLSAPIVQTPEYSLFVGDLSASTTEAHLLAFFQKSFPTSIKTVRVMTDPVSG 265
Query: 214 RTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
+++ +GFVRF DESE+ RA+ EM+G + RP+R+ AT
Sbjct: 266 KSRCFGFVRFTDESERQRALVEMHGAWFGGRPLRVALAT 304
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 60/96 (62%)
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 317
S + Q Q Q DPNNTTVFVG L S VT++ L LF +G + VKIP GK CGF++
Sbjct: 405 SPNLQGGQHGQPFTDPNNTTVFVGGLSSEVTEQTLFTLFKPFGIIQQVKIPPGKNCGFIK 464
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
++ R AEEA+ + G +GG +RLSWGR N +
Sbjct: 465 YSSREEAEEAIAAMQGFIIGGNRVRLSWGRVSMNNK 500
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 277 TVFVGNLDSIVTDEHLRELFSQ-------YGQLVHVKIPAGKRC-GFVQFADRSCAEEAL 328
++FVG+L + T+ HL F + +++ + RC GFV+F D S + AL
Sbjct: 226 SLFVGDLSASTTEAHLLAFFQKSFPTSIKTVRVMTDPVSGKSRCFGFVRFTDESERQRAL 285
Query: 329 RMLNGTQLGGQNIRLS 344
++G GG+ +R++
Sbjct: 286 VEMHGAWFGGRPLRVA 301
>gi|417399827|gb|JAA46899.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 370
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 156/331 (47%), Gaps = 21/331 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F G V+++++ R+ T + GY ++ F++ A A++VL T
Sbjct: 11 SLYVGDLPADVTEDMLFRKFNPVGPVLSIRICRDLVTRRSLGYAYVNFLNLADAQKVLDT 70
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N M G ++ RL W+ A ++ + +F+ +L + + ML E F A +
Sbjct: 71 MN-FDMIQG-KSIRLMWSQRDAYLRKSGIGN--VFIKNLDRSIDNKMLYEHFSA-FGKIL 125
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
+KV+ D R GY FV F +S RA+ EMNG + +GP N+K A Q
Sbjct: 126 SSKVMSDDKGSR--GYAFVHFQSQSAADRAIEEMNGALLKNCRLFVGPFKNRKEREAELQ 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
N T V++ N + DE L+E+FSQYG++V VK+ +GK GFV
Sbjct: 184 NKA-------NEFTNVYIKNFGDDMDDERLKEVFSQYGKIVSVKVMTDSSGKSKGFGFVS 236
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP--NQWNAGYYGYAQGYENY 375
F A+ A+ +NG + GQ + + + + +QA+ Q +G +G + Y
Sbjct: 237 FDTHEAAQRAVEYMNGKDICGQMVFVGRAQKKAERQAELKQMFEQLKRERFGRCRGVKLY 296
Query: 376 GYAAAAPQDPSMYYGGYPGYGNYQQPQQPQQ 406
D + +G+ + + ++
Sbjct: 297 IKNLDETIDEEQLRRAFSSFGSMSRVKVMEE 327
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 144/311 (46%), Gaps = 40/311 (12%)
Query: 55 MWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI 114
MW+ + A + +G+ ++I +L +D L F+ G++++ KV+
Sbjct: 84 MWSQRDAYLRKSGIG-------------NVFIKNLDRSIDNKMLYEHFSAFGKILSSKVM 130
Query: 115 RNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH 174
+ + + GY F+ F S++ A+R ++ NG + +N RL F ++R+ +
Sbjct: 131 SDDKGSR--GYAFVHFQSQSAADRAIEEMNGALL----KNCRLFVGPFKNRKEREAELQN 184
Query: 175 ------TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
+++ + D+ D L+E F ++Y KV+ D +G++KG+GFV F
Sbjct: 185 KANEFTNVYIKNFGDDMDDERLKEVF-SQYGKIVSVKVMTDS-SGKSKGFGFVSFDTHEA 242
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQN--SQVAQSD-DDPNNTTVFVGNLDS 285
RA+ MNG + + +G A K A + Q+ + +++ NLD
Sbjct: 243 AQRAVEYMNGKDICGQMVFVGRAQKKAERQAELKQMFEQLKRERFGRCRGVKLYIKNLDE 302
Query: 286 IVTDEHLRELFSQYGQLVHVKI--PAGKRCGF--VQFADRSCAEEALRM---LNGTQLGG 338
+ +E LR FS +G + VK+ G+ GF + F SC EEA + +NG LG
Sbjct: 303 TIDEEQLRRAFSSFGSMSRVKVMEEEGRSKGFGLICF---SCPEEATKAMAEMNGQVLGS 359
Query: 339 QNIRLSWGRSP 349
+ I ++ + P
Sbjct: 360 KAINIALAQRP 370
>gi|395731713|ref|XP_002811971.2| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40
[Pongo abelii]
Length = 386
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 153/317 (48%), Gaps = 34/317 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I +T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--ETAGNDPYCFVEFHDDRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYML 190
NG E ++NWA+ + +K+D + DH +FVGDL+ ++T +
Sbjct: 65 AMNGRKKMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 251 ATNKKTVSASYQNSQVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
AT K S S Q D P+N TV+ G + S +T++ +R+ FS +GQ++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ-- 355
+++ K FV+F A A+ +NGT + G ++ WG+ +P +Q Q
Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIG 301
Query: 356 -PDP-NQWNAGYYGYAQ 370
P P QW +YG AQ
Sbjct: 302 YPQPYGQWGQ-WYGNAQ 317
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 91/183 (49%), Gaps = 9/183 (4%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
+D T++VG+L+ DVT+ ++ + F P K K++++ T Y FV F D+
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIME--TAGNDPYCFVEFHDDRH 58
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ MNG + +++ AT + +S V + ++ VFVG+L +T
Sbjct: 59 AAAALAAMNGRKKMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEIT 118
Query: 289 DEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ IR
Sbjct: 119 TEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIR 178
Query: 343 LSW 345
+W
Sbjct: 179 TNW 181
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F D A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMETAGNDPYC-FVEFHDDRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG + G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKKMGKEVKVNWATTPSSQK 88
>gi|308198150|ref|XP_001387102.2| negative growth regulatory protein [Scheffersomyces stipitis CBS
6054]
gi|149389050|gb|EAZ63079.2| negative growth regulatory protein [Scheffersomyces stipitis CBS
6054]
Length = 690
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 120/231 (51%), Gaps = 32/231 (13%)
Query: 64 QAAGVAVPPQQQG--QPGEI---RTLWIGDLQYWMDETYL-NTCFAHTGEVVAVKVIRNK 117
Q + VA Q G GE+ RTLW+GDL W+DE + + + + V VK+I+ K
Sbjct: 79 QQSSVAAEKDQTGSDNSGEVQSPRTLWMGDLDPWLDENGIADLWWKILQKRVTVKIIKPK 138
Query: 118 --------QTGQIEGYGFIEFISRAGAERVLQTFNGTPMP---------------NGEQN 154
Q GY F+EF S A+ L NG +P N ++
Sbjct: 139 TSKPDITYQGLSHSGYCFVEFESFEDAQLAL-GLNGQLLPDIAMPSQQHFPNNPDNQKKY 197
Query: 155 FRLNWASFGA-GEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLT 212
FRLNWAS +P++++FVGDL+A T+ L F+ +P S K +V+ D ++
Sbjct: 198 FRLNWASGATLSAPIIQSPEYSLFVGDLSASTTEAHLLAFFQKNFPASIKTVRVMTDPVS 257
Query: 213 GRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQN 263
G+++ +GFVRF DESE+ RA+ EMNGV+ RP+R+ AT + +QN
Sbjct: 258 GKSRCFGFVRFTDESERQRALVEMNGVWFGGRPLRVALATPRNVNRNKFQN 308
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 248 IGPATNKKTVSASYQNSQV-AQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 306
+ P T T+ + Q+ V Q DPNNTTVFVG L S VT+ L LF +G + VK
Sbjct: 373 LDPGTGMGTIKSPMQSPGVQPQPYTDPNNTTVFVGGLSSEVTESTLFTLFKPFGIIQQVK 432
Query: 307 IPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
IP GK CGF++++ R AEEA+ + G +GG +RLSWGR N +
Sbjct: 433 IPPGKNCGFIKYSTREEAEEAIAAMQGFIIGGNRVRLSWGRVSMNNK 479
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 32/197 (16%)
Query: 175 TIFVGDL--------AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDE 226
T+++GDL AD+ +LQ+ + K +K I GY FV F +
Sbjct: 103 TLWMGDLDPWLDENGIADLWWKILQKRVTVKIIKPKTSKPDITYQGLSHSGYCFVEF-ES 161
Query: 227 SEQLRAMTEMNGVFC------STRPMRIGPATNKKT-----VSASYQNSQVAQSDDDPNN 275
E + +NG S + P KK S + ++ + QS +
Sbjct: 162 FEDAQLALGLNGQLLPDIAMPSQQHFPNNPDNQKKYFRLNWASGATLSAPIIQSPE---- 217
Query: 276 TTVFVGNLDSIVTDEHLRELFSQY--GQLVHVKI----PAGK-RC-GFVQFADRSCAEEA 327
++FVG+L + T+ HL F + + V++ +GK RC GFV+F D S + A
Sbjct: 218 YSLFVGDLSASTTEAHLLAFFQKNFPASIKTVRVMTDPVSGKSRCFGFVRFTDESERQRA 277
Query: 328 LRMLNGTQLGGQNIRLS 344
L +NG GG+ +R++
Sbjct: 278 LVEMNGVWFGGRPLRVA 294
>gi|281351637|gb|EFB27221.1| hypothetical protein PANDA_001198 [Ailuropoda melanoleuca]
Length = 245
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 94/146 (64%), Gaps = 6/146 (4%)
Query: 124 GYGFIEFISRAGAERVLQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDL 181
GY F+EF A AE+ L NG P+P + F+LN+A++G ++ D++P++++FVGDL
Sbjct: 4 GYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDL 61
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VF 240
DV D ML E F YPS +G KVV+D+ TG +KGYGFV+F DE EQ RA++E G V
Sbjct: 62 TPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALSECQGAVG 120
Query: 241 CSTRPMRIGPATNKKTVSASYQNSQV 266
++P+R+ A K + + SQ+
Sbjct: 121 LGSKPVRLSVAIPKASRVKPVEYSQM 146
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 18/136 (13%)
Query: 217 GYGFVRFGDESEQLRAMTEMNGVFCSTRPM-RIGPATNKKTVSASYQNSQVAQSDDDPNN 275
GY FV F D + + + ++NG +P+ PA K A+Y Q D+ P
Sbjct: 4 GYCFVEFADLATAEKCLHKING-----KPLPGATPAKRFKLNYATYGK----QPDNSP-E 53
Query: 276 TTVFVGNLDSIVTDEHLRELFSQY------GQLVHVKIPAGKRCGFVQFADRSCAEEALR 329
++FVG+L V D L E F + G++V + K GFV+F D + AL
Sbjct: 54 YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALS 113
Query: 330 MLNG-TQLGGQNIRLS 344
G LG + +RLS
Sbjct: 114 ECQGAVGLGSKPVRLS 129
>gi|226496737|ref|NP_001151785.1| LOC100285420 [Zea mays]
gi|195649671|gb|ACG44303.1| polyadenylate-binding protein 2 [Zea mays]
gi|414586484|tpg|DAA37055.1| TPA: polyadenylate-binding protein 2 [Zea mays]
Length = 660
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 148/294 (50%), Gaps = 25/294 (8%)
Query: 48 PQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE 107
P P A+ A +P A GV + QP +L++GDL+ + ++ L F+ G+
Sbjct: 11 PNGSPGAVPAV--VSPGAVGVGL---GVAQPLPTTSLYVGDLEGSVSDSQLYELFSQAGQ 65
Query: 108 VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEK 167
VV+V+V R+ + + GY ++ F + A R L+ N P+ N + R+ +++ +
Sbjct: 66 VVSVRVCRDVTSRRSLGYAYVNFNNPLDAARALEVLNFAPLNN--KPIRVMYSNRDPSSR 123
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
R + + IF+ +L + + L ETF + + + KV +D G++KG+GFV++ E
Sbjct: 124 RSGSAN--IFIKNLDKMIDNKSLHETF-SSFGTILSCKVAMDE-GGQSKGFGFVQYEKEE 179
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
A+ +NG+ + +P+ +GP K+ S+ ++ NN VFV NL
Sbjct: 180 AAQNAIKSLNGMLINDKPVFVGPFLRKQERDHSFDKTKF-------NN--VFVKNLSEST 230
Query: 288 TDEHLRELFSQYGQL----VHVKIPAGKRC-GFVQFADRSCAEEALRMLNGTQL 336
T E L ++F +YG + V + + RC GF+ F + A A++ LNG ++
Sbjct: 231 TKEDLLKIFGEYGNITSAVVMIGMDGKSRCFGFINFENPDAASRAVQELNGKKI 284
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 142/284 (50%), Gaps = 19/284 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ F+ G +++ KV + + GQ +G+GF+++ A+ +++
Sbjct: 129 NIFIKNLDKMIDNKSLHETFSSFGTILSCKVAMD-EGGQSKGFGFVQYEKEEAAQNAIKS 187
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT----IFVGDLAADVTDYMLQETFRARY 198
NG + N + F F ++RD + D T +FV +L+ T L + F Y
Sbjct: 188 LNGM-LINDKPVF---VGPFLRKQERDHSFDKTKFNNVFVKNLSESTTKEDLLKIF-GEY 242
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--KT 256
+ A V+I + G+++ +GF+ F + RA+ E+NG + + +G A K +
Sbjct: 243 GNITSAVVMIG-MDGKSRCFGFINFENPDAASRAVQELNGKKINDKEWYVGRAQKKSERE 301
Query: 257 VSASYQNSQVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AG 310
+ + Q+ + D +++ NLD + D+ LRELFS +G++ K+
Sbjct: 302 MELKRRFEQILKDAADKYQGLNLYLKNLDDSIGDDQLRELFSNFGKITSCKVMRDQNGLS 361
Query: 311 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 354
K GFV F+ R A +AL +NG + G+ + +++ + +++A
Sbjct: 362 KGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKA 405
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 83/201 (41%), Gaps = 27/201 (13%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L + L F G + + V+ G+ +GFI F + A R
Sbjct: 217 KFNNVFVKNLSESTTKEDLLKIFGEYGNITSA-VVMIGMDGKSRCFGFINFENPDAASRA 275
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRD--------------DTPDH----TIFVGDL 181
+Q NG + + E W A +K + D D +++ +L
Sbjct: 276 VQELNGKKINDKE------WYVGRAQKKSEREMELKRRFEQILKDAADKYQGLNLYLKNL 329
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
+ D L+E F + + KV+ D+ G +KG GFV F E +A+TEMNG
Sbjct: 330 DDSIGDDQLRELF-SNFGKITSCKVMRDQ-NGLSKGSGFVAFSTREEASQALTEMNGKMI 387
Query: 242 STRPMRIGPATNKKTVSASYQ 262
S +P+ + A K+ A Q
Sbjct: 388 SGKPLYVAFAQRKEDRKAMLQ 408
>gi|170029244|ref|XP_001842503.1| RNA-binding post-transcriptional regulator csx1 [Culex
quinquefasciatus]
gi|167881606|gb|EDS44989.1| RNA-binding post-transcriptional regulator csx1 [Culex
quinquefasciatus]
Length = 326
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 103/192 (53%), Gaps = 16/192 (8%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E ++ F GE VK++RNK TG GY F+ F + A +
Sbjct: 8 LWMGSLESYMTEAFILAAFRKMGEDPSTVKLMRNKYTGDPAGYCFVSFKTDDAALDAMHK 67
Query: 143 FNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG P+P N FRLN A+ + +++VGDL++DV DY L F +Y S
Sbjct: 68 LNGKPIPGTNPLVRFRLNSATNNQHRALLADREFSVWVGDLSSDVDDYSLYRVFSTKYTS 127
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRI----------- 248
K AKV++D +G +KGYGFV+FG E EQ A+ +MNG ++P++I
Sbjct: 128 IKTAKVILDS-SGFSKGYGFVKFGLEDEQKNALYDMNGFIGLGSKPLKICNAVPKPKSEL 186
Query: 249 GPATNKKTVSAS 260
GP + T SA+
Sbjct: 187 GPGSGTSTTSAA 198
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 22/179 (12%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L + +T+ + FR K++ ++ TG GY FV F + L AM +
Sbjct: 8 LWMGSLESYMTEAFILAAFRKMGEDPSTVKLMRNKYTGDPAGYCFVSFKTDDAALDAMHK 67
Query: 236 MNGV-FCSTRPM---RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEH 291
+NG T P+ R+ ATN N A D +V+VG+L S V D
Sbjct: 68 LNGKPIPGTNPLVRFRLNSATN---------NQHRALLAD--REFSVWVGDLSSDVDDYS 116
Query: 292 LRELFS-QYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRL 343
L +FS +Y + K+ K GFV+F + AL +NG LG + +++
Sbjct: 117 LYRVFSTKYTSIKTAKVILDSSGFSKGYGFVKFGLEDEQKNALYDMNGFIGLGSKPLKI 175
>gi|17537143|ref|NP_496718.1| Protein TIAR-2 [Caenorhabditis elegans]
gi|6425313|emb|CAB60356.1| Protein TIAR-2 [Caenorhabditis elegans]
Length = 434
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 136/295 (46%), Gaps = 35/295 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTL++ +L + + +L T F G V+ K+I G + Y F+EF A LQ
Sbjct: 40 RTLFVANLDPAITDEFLATLFNQIGAVMKAKIIF---EGLNDPYAFVEFSDHNQATLALQ 96
Query: 142 TFNGTPMPNGEQNFRLNWASF----GAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRA 196
+ NG + E+ + WA G + +T H +FVGDL +++ L+E F
Sbjct: 97 SHNGRELL--EKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAF-V 153
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK-- 254
++ AK++ D T + KGYGFV + + RA+ EMNG + R +R AT K
Sbjct: 154 KFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRKPD 213
Query: 255 ----------------KTVSASYQNSQVAQSDDDPN-----NTTVFVGNLDSIVTDEHLR 293
Y N D+ N NT+V+VGN+ ++ DE +R
Sbjct: 214 EDGERGGDRGDRRGGGGGGRDRYHNQSEKTYDEIFNQAAADNTSVYVGNIANLGEDE-IR 272
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
F ++G + V+ + FV+F + A A+ +N +GGQ +R SWG+S
Sbjct: 273 RAFDRFGPINEVRTFKIQGYAFVKFETKESAARAIVQMNNADIGGQIVRCSWGKS 327
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 77 QPGEIRT---------LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGF 127
+PGE R+ +++GDL +D T L F GEV K+IR+ T + +GYGF
Sbjct: 118 EPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGF 177
Query: 128 IEFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS 161
+ + R AER + NG + G + R NWA+
Sbjct: 178 VSYPRREDAERAIDEMNGAWL--GRRTIRTNWAT 209
>gi|213514260|ref|NP_001133879.1| Nucleolysin TIAR [Salmo salar]
gi|209155676|gb|ACI34070.1| Nucleolysin TIAR [Salmo salar]
Length = 408
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 142/298 (47%), Gaps = 26/298 (8%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK---------------QTGQIEGYG 126
+TL++G+L + E + F G + K+I + Q + Y
Sbjct: 8 KTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEQPDSRRMNSSVGFSVLQQSSNDPYC 67
Query: 127 FIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVT 186
F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ ++T
Sbjct: 68 FVEFFEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 125
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R +
Sbjct: 126 TEDIKAAF-APFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 184
Query: 247 RIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFSQY 299
R AT K + Q++ Q + P N TV+ G + S +++ +R+ FS +
Sbjct: 185 RTNWATRKPPAPKNVQDNGSKQLRFEDVVNQSSPQNCTVYCGGIQSGLSEHLMRQTFSPF 244
Query: 300 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQAQP 356
GQ++ +++ K F++F+ A A+ +NGT + ++ WG+ SP ++ P
Sbjct: 245 GQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTSIECHIVKCYWGKESPDIAKSVP 302
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 33/199 (16%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKG---------- 217
D++ T++VG+L+ DVT+ ++ + F P K K++ ++ R
Sbjct: 2 EDESHPKTLYVGNLSRDVTEILILQLFTQIGP-CKSCKMITEQPDSRRMNSSVGFSVLQQ 60
Query: 218 -----YGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDD 272
Y FV F + + A+ MNG + +++ AT + Q D
Sbjct: 61 SSNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWATTPSS-----------QKKDT 109
Query: 273 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEE 326
N+ VFVG+L +T E ++ F+ +G++ ++ K GFV F ++ AE
Sbjct: 110 SNHFHVFVGDLSPEITTEDIKAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAEN 169
Query: 327 ALRMLNGTQLGGQNIRLSW 345
A+ + G LGG+ IR +W
Sbjct: 170 AIVHMGGQWLGGRQIRTNW 188
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 27/189 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 100 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGKISDARVVKDMTTGKSKGYGFV 159
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF-----------GAGEKR-DDTPDH-- 174
F ++ AE + G + G + R NWA+ G+ + R +D +
Sbjct: 160 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKNVQDNGSKQLRFEDVVNQSS 217
Query: 175 ----TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
T++ G + + ++++++++TF S G + I KGY F+RF
Sbjct: 218 PQNCTVYCGGIQSGLSEHLMRQTF-----SPFGQIMEIRVFP--EKGYSFIRFSSHESAA 270
Query: 231 RAMTEMNGV 239
A+ +NG
Sbjct: 271 HAIVSVNGT 279
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 21/105 (20%)
Query: 270 DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI----PAGKRCG----------- 314
+D+ + T++VGNL VT+ + +LF+Q G K+ P +R
Sbjct: 2 EDESHPKTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEQPDSRRMNSSVGFSVLQQS 61
Query: 315 ------FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
FV+F + A AL +NG ++ G+ ++++W +PS+++
Sbjct: 62 SNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQK 106
>gi|170055835|ref|XP_001863758.1| nucleolysin tia-1 [Culex quinquefasciatus]
gi|167875726|gb|EDS39109.1| nucleolysin tia-1 [Culex quinquefasciatus]
Length = 456
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 132/277 (47%), Gaps = 17/277 (6%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F G V + K+IR + + Y FIE+ S A+ L
Sbjct: 8 KTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASS---DPYAFIEYASHQSAQTALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N E ++NWA+ G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRLFLKKE--IKVNWATSPGNQPKTDTSQHHHIFVGDLSPEIETETLREAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI--------GPAT 252
++V D T ++KGY FV F ++E A+ MNG + +R +R P
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKPPAPRE 181
Query: 253 NKKTV-SASYQNSQVAQSDDDPNNTTVFVGNLD-SIVTDEHLRELFSQYGQLVHVKIPAG 310
N K + S + ++ P NTTV+ G + ++D ++ F Q+G + V++
Sbjct: 182 NTKGIKSGKTPGFEEIYNNTGPTNTTVYCGGFPPNTISDNLIKTHFGQFGSIHDVRVFKD 241
Query: 311 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
K F++F + A A+ + +++ G ++ WG+
Sbjct: 242 KGYAFIKFISKEAAARAIEGTHNSEVQGHPVKCYWGK 278
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 327
D+ T++VGNLD VT++ L LF Q G + KI + F+++A A+ A
Sbjct: 3 DEAYPKTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSDPYAFIEYASHQSAQTA 62
Query: 328 LRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYG 367
L +N + I+++W SP N Q + D +Q + + G
Sbjct: 63 LAAMNKRLFLKKEIKVNWATSPGN-QPKTDTSQHHHIFVG 101
>gi|357164563|ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 661
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 135/265 (50%), Gaps = 20/265 (7%)
Query: 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
QP +L++GDL+ + ++ L F+ G+VV+V+V R+ + + GY ++ F + A
Sbjct: 32 QPLPTTSLYVGDLEASVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNFSNPMDA 91
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
R L+ N P+ N + R+ +++ +R + + IF+ +L + + L +TF A
Sbjct: 92 ARALEMLNFVPLNN--KPIRVMYSNRDPSSRRSGSAN--IFIKNLDKTIDNKTLHDTFSA 147
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+ + KV D + G++KG+GFV++ E AM +NG+ + +P+ +GP K+
Sbjct: 148 -FGAILSCKVATDDM-GQSKGFGFVQYEKEEFAQSAMKSLNGMLINDKPVYVGPFLRKQE 205
Query: 257 VSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG----KR 312
S+ ++ NN VFV NL T E L ++FS+YG + + G R
Sbjct: 206 RDNSFDKARF-------NN--VFVKNLSESTTKEDLVKIFSEYGNITSAVVMVGTDGKSR 256
Query: 313 C-GFVQFADRSCAEEALRMLNGTQL 336
C GF+ F A A+ LNG ++
Sbjct: 257 CFGFINFESPDDAVRAVEELNGKKI 281
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 138/283 (48%), Gaps = 19/283 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L+ F+ G +++ KV + GQ +G+GF+++ A+ +++
Sbjct: 127 IFIKNLDKTIDNKTLHDTFSAFGAILSCKVATD-DMGQSKGFGFVQYEKEEFAQSAMKSL 185
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPD----HTIFVGDLAADVTDYMLQETFRARYP 199
NG + + + F ++RD++ D + +FV +L+ T L + F + Y
Sbjct: 186 NGMLINDKP----VYVGPFLRKQERDNSFDKARFNNVFVKNLSESTTKEDLVKIF-SEYG 240
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
+ A V++ G+++ +GF+ F + +RA+ E+NG + + G A K
Sbjct: 241 NITSAVVMVG-TDGKSRCFGFINFESPDDAVRAVEELNGKKINDKEWYCGRAQKKSEREM 299
Query: 260 SYQNS---QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AGK 311
+ + + D +++ NLD ++D+ LRELFS +G++ K+ K
Sbjct: 300 DLKRRFEQSMKDAADKYQGQNLYLKNLDDGISDDQLRELFSTFGKITSCKVMRDQNGVSK 359
Query: 312 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 354
GFV F+ R A +A+ +NG L G+ + +++ + ++A
Sbjct: 360 GSGFVAFSTREEASQAITEMNGKMLSGKPLYVAFAQRKEERKA 402
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 83/197 (42%), Gaps = 27/197 (13%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++ +L + L F+ G + + V+ G+ +GFI F S A R ++
Sbjct: 218 VFVKNLSESTTKEDLVKIFSEYGNITSA-VVMVGTDGKSRCFGFINFESPDDAVRAVEEL 276
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPD------------------HTIFVGDLAADV 185
NG + + E W A +K + D +++ +L +
Sbjct: 277 NGKKINDKE------WYCGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGI 330
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
+D L+E F + + KV+ D+ G +KG GFV F E +A+TEMNG S +P
Sbjct: 331 SDDQLRELF-STFGKITSCKVMRDQ-NGVSKGSGFVAFSTREEASQAITEMNGKMLSGKP 388
Query: 246 MRIGPATNKKTVSASYQ 262
+ + A K+ A Q
Sbjct: 389 LYVAFAQRKEERKAMLQ 405
>gi|47217530|emb|CAG02457.1| unnamed protein product [Tetraodon nigroviridis]
Length = 418
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 136/272 (50%), Gaps = 16/272 (5%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F G + K+I + T + Y F+EF A L N
Sbjct: 15 YVGNLSRDVTEPLILQVFTQIGPCKSCKMIVD--TAGNDPYCFVEFYEHRHAAASLAAMN 72
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
G + E ++NWA+ +K+D + +FVGDL+ ++T ++ F + A
Sbjct: 73 GRKIMGKE--VKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTDDVKAAF-GPFGRISDA 129
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----KTVSAS 260
+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K KT S
Sbjct: 130 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKTTYES 189
Query: 261 YQNSQVAQSDD-----DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGF 315
NS+ DD P+N TV+ G + + +T++ +R+ FS +G ++ +++ K F
Sbjct: 190 --NSKQLCFDDVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGPIMEIRVFPDKGYSF 247
Query: 316 VQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
V+F A A+ +NG+ + G ++ WG+
Sbjct: 248 VRFNSHESAAHAIVSVNGSSIEGHVVKCYWGK 279
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIE 129
P Q+ +++GDL + + F G + +V+++ TG+ +GYGF+
Sbjct: 88 TPTSQKKDTSNHFHVFVGDLSPEITTDDVKAAFGPFGRISDARVVKDMATGKSKGYGFVS 147
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWA---------SFGAGEKR---DDTPDH--- 174
F ++ AE +Q G + G + R NWA ++ + K+ DD +
Sbjct: 148 FFNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPPAPKTTYESNSKQLCFDDVVNQSSP 205
Query: 175 ---TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
T++ G ++ +T+ ++++TF P +++ KGY FVRF
Sbjct: 206 SNCTVYCGGVSTGLTEQLMRQTFSPFGP-------IMEIRVFPDKGYSFVRFNSHESAAH 258
Query: 232 AMTEMNG 238
A+ +NG
Sbjct: 259 AIVSVNG 265
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 279 FVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAEEALRMLNG 333
+VGNL VT+ + ++F+Q G K+ AG C FV+F + A +L +NG
Sbjct: 15 YVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYC-FVEFYEHRHAAASLAAMNG 73
Query: 334 TQLGGQNIRLSWGRSPSNKQ 353
++ G+ ++++W +P++++
Sbjct: 74 RKIMGKEVKVNWATTPTSQK 93
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 134/265 (50%), Gaps = 20/265 (7%)
Query: 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
QP +L++GDL+ + ++ L F+ G+VV+V+V R+ + + GY ++ + + A
Sbjct: 117 QPLPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDA 176
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
R ++ N P+ N + R+ +++ +R + + IF+ +L + + L +TF A
Sbjct: 177 ARAMEALNFAPLNN--KPIRVMYSNRDPSSRRSGSAN--IFIKNLDKTIDNKTLHDTFSA 232
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+ + KV +D + G++KG+GFV++ E AM +NG+ + +P+ +GP K+
Sbjct: 233 -FGAILSCKVAMDDI-GQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYVGPFLRKQ- 289
Query: 257 VSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL----VHVKIPAGKR 312
+ S D VFV NL T E L ++FS+YG + V + + R
Sbjct: 290 --------ERDNSSDKAKFNNVFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKSR 341
Query: 313 C-GFVQFADRSCAEEALRMLNGTQL 336
C GFV F A A+ LNG ++
Sbjct: 342 CFGFVNFESPDDAARAVEELNGKKI 366
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 139/284 (48%), Gaps = 19/284 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ F+ G +++ KV + GQ +G+GF+++ A+ +++
Sbjct: 211 NIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMD-DIGQSKGFGFVQYEKEESAQSAMKS 269
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPD----HTIFVGDLAADVTDYMLQETFRARY 198
NG + + + F ++RD++ D + +FV +L+ T L + F + Y
Sbjct: 270 LNGMLINDKP----VYVGPFLRKQERDNSSDKAKFNNVFVKNLSESTTKEDLIKVF-SEY 324
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
+ A V+I + G+++ +GFV F + RA+ E+NG + + +G A K
Sbjct: 325 GTITSAVVMIG-MDGKSRCFGFVNFESPDDAARAVEELNGKKINDKEWYVGRAQKKSERE 383
Query: 259 ASYQNS---QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-----PAG 310
+ + + D +++ NLD +TD+ LRELFS +G++ KI
Sbjct: 384 MDLKRRFEQSMKDAADKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVS 443
Query: 311 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 354
K GFV F+ R A +AL +NG + G+ + +++ + ++A
Sbjct: 444 KGSGFVSFSTREEASQALTEMNGKMISGKPLYVAFAQRKEERKA 487
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 27/201 (13%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L + L F+ G + + V+ G+ +GF+ F S A R
Sbjct: 299 KFNNVFVKNLSESTTKEDLIKVFSEYGTITSA-VVMIGMDGKSRCFGFVNFESPDDAARA 357
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPD------------------HTIFVGDL 181
++ NG + + E W A +K + D +++ +L
Sbjct: 358 VEELNGKKINDKE------WYVGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNL 411
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
+TD L+E F + + K++ D+ G +KG GFV F E +A+TEMNG
Sbjct: 412 DDGITDDQLRELF-SNFGKITSCKIMRDQ-NGVSKGSGFVSFSTREEASQALTEMNGKMI 469
Query: 242 STRPMRIGPATNKKTVSASYQ 262
S +P+ + A K+ A Q
Sbjct: 470 SGKPLYVAFAQRKEERKAMLQ 490
>gi|262401121|gb|ACY66463.1| TIA-1-like protein [Scylla paramamosain]
Length = 325
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 19/275 (6%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F GEV + K+ R T + Y F+EF A + N
Sbjct: 1 YVGNLDNSVTEDLIMMLFGQLGEVRSCKMFREPTT---DPYCFVEFCDHMTALNAITMMN 57
Query: 145 GTPMPNGEQNFRLNWASFGAGEKR-----DDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
+ N + R++WA+ G G K D + H ++VGDL+ ++ + L+E F+ +
Sbjct: 58 DKMLQN--RKMRVDWAT-GQGNKNKYTKVDTSRHHHVYVGDLSPEIDEQALREAFQV-FG 113
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
KVV D + +++GYGFV F + + +++ MNG + + ++ AT K +
Sbjct: 114 EISDCKVVKDPQSFKSRGYGFVVFVKKMDAETSISAMNGQWLGRKMIKTRWATRKPANTP 173
Query: 260 SYQNSQVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR 312
+ + + + D P NTTVF G L +T+E L + F +GQ+ +KI K
Sbjct: 174 NETKPEQKKLNYDEVFNQTTPTNTTVFCGGLKQDITEEMLHKSFQPHGQIEKIKIFKEKG 233
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
F+++ + A +A+ L+ + L GQ IR SWG+
Sbjct: 234 YAFIKYTSKESACQAIVELHNSNLNGQMIRCSWGK 268
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 27/172 (15%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL +DE L F GE+ KV+++ Q+ + GYGF+ F+ + AE +
Sbjct: 91 VYVGDLSPEIDEQALREAFQVFGEISDCKVVKDPQSFKSRGYGFVVFVKKMDAETSISAM 150
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTP------------------DHTIFVGDLAADV 185
NG + G + + WA+ ++T + T+F G L D+
Sbjct: 151 NGQWL--GRKMIKTRWATRKPANTPNETKPEQKKLNYDEVFNQTTPTNTTVFCGGLKQDI 208
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
T+ ML ++F+ P + K+ I + KGY F+++ + +A+ E++
Sbjct: 209 TEEMLHKSFQ---PHGQIEKIKI----FKEKGYAFIKYTSKESACQAIVELH 253
>gi|354545611|emb|CCE42339.1| hypothetical protein CPAR2_808880 [Candida parapsilosis]
Length = 739
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 112/202 (55%), Gaps = 29/202 (14%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVV---------AVKVIRNKQTGQIEGYGFIEFIS 132
RTLW+GDL W+DE + + + + A+K+ Q GY F+EF S
Sbjct: 123 RTLWMGDLDSWLDEQQITDLWWNLLKKKVGVKIIKPKALKLDPQLQGLTNSGYCFVEFES 182
Query: 133 RAGAERVLQTFNGTPMP---------------NGEQNFRLNWASFGAGEKRD--DTPDHT 175
A++ L + NG +P N ++ FRLNWAS GA P+++
Sbjct: 183 FEDAQQAL-SLNGQLLPDIAMPSQQLYPNNPDNQKKYFRLNWAS-GATLSAPIVQMPEYS 240
Query: 176 IFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+FVGDL+A T+ L F+ R+P S K +V+ D ++G+++ +GFVRF +ESE+ RA+T
Sbjct: 241 LFVGDLSASTTEAHLLAFFQKRFPNSIKTVRVMTDPISGKSRCFGFVRFTEESERQRALT 300
Query: 235 EMNGVFCSTRPMRIGPATNKKT 256
EMNGV+ + RP+R+ AT + T
Sbjct: 301 EMNGVWFAGRPLRVALATPRST 322
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 52/82 (63%)
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
DPNNTTVFVG L S VT+ L LF +G + +KIP GK CGFV+++ R AE + +
Sbjct: 472 DPNNTTVFVGGLSSEVTEATLFTLFKPFGVIQQIKIPPGKNCGFVKYSTREEAERTIAAM 531
Query: 332 NGTQLGGQNIRLSWGRSPSNKQ 353
G +GG +RLSWG+ N +
Sbjct: 532 QGFIIGGNRVRLSWGKVSVNNK 553
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 277 TVFVGNLDSIVTDEHLRELFSQ-------YGQLVHVKIPAGKRC-GFVQFADRSCAEEAL 328
++FVG+L + T+ HL F + +++ I RC GFV+F + S + AL
Sbjct: 240 SLFVGDLSASTTEAHLLAFFQKRFPNSIKTVRVMTDPISGKSRCFGFVRFTEESERQRAL 299
Query: 329 RMLNGTQLGGQNIRLS 344
+NG G+ +R++
Sbjct: 300 TEMNGVWFAGRPLRVA 315
>gi|344301504|gb|EGW31816.1| hypothetical protein SPAPADRAFT_56576 [Spathaspora passalidarum
NRRL Y-27907]
Length = 632
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 115/210 (54%), Gaps = 31/210 (14%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIR----------NKQTGQIEGYGFIEF 130
RTLW+GDL W+DE + + + + V VK+I+ N Q GY F+EF
Sbjct: 94 RTLWMGDLDPWLDEQGITDLWWNILHKRVVVKIIKPKSSISNLDPNYQGLTNSGYCFVEF 153
Query: 131 ISRAGAERVLQTFNGTPMP---------------NGEQNFRLNWASFGAGEKR--DDTPD 173
+ A++ L + NG +P N ++ FRLNWAS GA TP+
Sbjct: 154 ETFEDAQQAL-SLNGQLLPDIAMPSQQHFPNNPDNQKKYFRLNWAS-GATLTAPIIQTPE 211
Query: 174 HTIFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+++FVGDL+A T+ L F+ +P S K +V+ D ++G+++ +GFVRF DESE+ RA
Sbjct: 212 YSLFVGDLSASTTEAHLLAFFQKSFPNSIKTVRVMTDPISGKSRCFGFVRFTDESERQRA 271
Query: 233 MTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
+ EMNGV+ + RP+R+ AT + Y+
Sbjct: 272 LVEMNGVWFAGRPLRVALATPRTNPRNKYE 301
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 265 QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 324
Q+AQ DP NTTVFVG L S V++ L LF +G + VKIP GK CGFV++ R A
Sbjct: 377 QLAQPYADPTNTTVFVGGLSSEVSEPTLFTLFKPFGIIQQVKIPPGKNCGFVKYTTREEA 436
Query: 325 EEALRMLNGTQLGGQNIRLSWGR-SPSNKQ 353
EEA+ + G +GG +RLSWGR SP+NK+
Sbjct: 437 EEAIAAMQGFIIGGNRVRLSWGRVSPTNKK 466
>gi|242010197|ref|XP_002425859.1| Nucleolysin TIAR, putative [Pediculus humanus corporis]
gi|212509811|gb|EEB13121.1| Nucleolysin TIAR, putative [Pediculus humanus corporis]
Length = 295
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 97/175 (55%), Gaps = 5/175 (2%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E++L F GE A+K++RN+ TG+ GY F+ F S A V+
Sbjct: 7 LWMGSLESYMTESFLMNAFVKMGESPTAIKIMRNRLTGEQAGYCFVHFTSDEIARTVMHK 66
Query: 143 FNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG +PN F+LN A +++++VGDL+ D+ DY L + F +RY S
Sbjct: 67 LNGKVIPNSSPPVRFKLNHAGPNNRPVVGQDKEYSLWVGDLSPDIDDYTLYKCFASRYQS 126
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPATNK 254
+ AKVV+D G +KGY F+RF E EQ +MNG +RP+++ A K
Sbjct: 127 IRTAKVVLDS-AGFSKGYAFIRFASEEEQKNCCIQMNGFKGLGSRPIKVSGAVPK 180
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 7/98 (7%)
Query: 48 PQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE 107
P + PP + A P V GQ E +LW+GDL +D+ L CFA +
Sbjct: 73 PNSSPPVRFKLNHAGPNNRPVV------GQDKEY-SLWVGDLSPDIDDYTLYKCFASRYQ 125
Query: 108 VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNG 145
+ + G +GY FI F S + NG
Sbjct: 126 SIRTAKVVLDSAGFSKGYAFIRFASEEEQKNCCIQMNG 163
>gi|395507384|ref|XP_003758005.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Sarcophilus harrisii]
Length = 394
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 143/283 (50%), Gaps = 23/283 (8%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 VMYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAA 64
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYMLQ 191
NG + E ++NWA+ + +K+D + DH +FVGDL+ ++T ++
Sbjct: 65 MNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTLRSQDHFHVFVGDLSPEITTEDIK 122
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R A
Sbjct: 123 AAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 181
Query: 252 TNKKTV-SASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVH 304
T K ++Y+++ S DD P+N TV+ G + S +T++ +R+ FS +GQ++
Sbjct: 182 TRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIME 241
Query: 305 VKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
+++ K FV+F A A+ +NGT + G ++ WG+
Sbjct: 242 IRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGK 284
>gi|7493336|pir||T39935 RNA binding protein - fission yeast (Schizosaccharomyces pombe)
(fragment)
Length = 240
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 90/148 (60%), Gaps = 3/148 (2%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
TLW+G+L+ W+ E ++ + G+ V VK+IRN+ TG GY F+EF S A + +
Sbjct: 94 TLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAM-S 152
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N P+P F+LNWAS G ++ +++IFVGDL+ +V ++ + F +RY S
Sbjct: 153 MNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYNS 212
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESE 228
K AK++ D T ++GYGFVRF DE++
Sbjct: 213 CKSAKIMTDPQTNVSRGYGFVRFTDEND 240
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 78/187 (41%), Gaps = 26/187 (13%)
Query: 148 MPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVV 207
M + E N +++G+ + T+++G+L VT+ +Q+ + + K K++
Sbjct: 67 MASNESGNSENTSNYGSSRDENVYQKTTLWMGELEPWVTEAFIQQVWNTLGKAVK-VKLI 125
Query: 208 IDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM-----RIGPATNKKTVSASYQ 262
+R TG GY FV F E AM+ N T + G +K++S + +
Sbjct: 126 RNRYTGMNAGYCFVEFASPHEASSAMSMNNKPIPGTNHLFKLNWASGGGLREKSISKASE 185
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELF-SQYGQLVHVKI------PAGKRCGF 315
S +FVG+L V + + LF S+Y KI + GF
Sbjct: 186 YS-------------IFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGF 232
Query: 316 VQFADRS 322
V+F D +
Sbjct: 233 VRFTDEN 239
>gi|410929559|ref|XP_003978167.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 385
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 137/277 (49%), Gaps = 12/277 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F G + K+I + T + Y F+EF A +
Sbjct: 7 KTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ +K+D + +FVGDL+ ++T ++ F +
Sbjct: 65 AMNGRKILGKE--VKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAF-GPFGKI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K +
Sbjct: 122 SDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTN 181
Query: 262 QNSQVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG 314
+ + Q D P+N TV+ G + + +T++ +R+ FS +G ++ +++ K
Sbjct: 182 ETTNTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGHIMEIRVFPDKGYS 241
Query: 315 FVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 351
FV+F A A+ +NGT + G ++ WG+ ++
Sbjct: 242 FVRFNSHEAAAHAIVSVNGTTIEGYVVKCYWGKETTD 278
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 21/189 (11%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
DD T++VG+L+ DVT+ ++ E F P K K+++D T Y FV F +
Sbjct: 2 DDEQPKTLYVGNLSRDVTEALILELFGQIGPC-KSCKMIVD--TAGHDPYCFVEFYEHRH 58
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
+ MNG R + K V ++ + +Q D ++ VFVG+L +T
Sbjct: 59 ATATIAAMNG-----RKIL------GKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEIT 107
Query: 289 DEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ F +G++ ++ K GFV F ++ AE A++ + G LGG+ IR
Sbjct: 108 TDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIR 167
Query: 343 LSWG-RSPS 350
+W R P+
Sbjct: 168 TNWATRKPA 176
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 27/186 (14%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q+ +++GDL + + F G++ +V+++ TG+ +GYGF+ F
Sbjct: 84 PTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSF 143
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDDTP 172
++ AE +Q G + G + R NWA SF +
Sbjct: 144 FNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPAPKTTNETTNTKQLSFDEVVNQSSPS 201
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ T++ G + +T+ ++++TF + + +V D KGY FVRF A
Sbjct: 202 NCTVYCGGVTTGLTEQIMRQTF-SPFGHIMEIRVFPD------KGYSFVRFNSHEAAAHA 254
Query: 233 MTEMNG 238
+ +NG
Sbjct: 255 IVSVNG 260
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
DD T++VGNL VT+ + ELF Q G K+ AG C FV+F + A
Sbjct: 2 DDEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYC-FVEFYEHRHAT 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
+ +NG ++ G+ ++++W +P++++
Sbjct: 61 ATIAAMNGRKILGKEVKVNWATTPTSQK 88
>gi|194742700|ref|XP_001953839.1| GF17967 [Drosophila ananassae]
gi|190626876|gb|EDV42400.1| GF17967 [Drosophila ananassae]
Length = 471
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 137/294 (46%), Gaps = 34/294 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F+ G V + K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGHVKSCKIIREPGN---DPYAFIEYSTYQAATTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWA-SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N + E ++NWA S G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLFLDKE--IKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F ++E A+T MNG + +R +R +T K
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAITAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 255 -------------------KTVSASYQNS-QVAQSDDDPNNTTVFVGNLD-SIVTDEHLR 293
V S +++ + + P NTTV+ G ++++D+ +
Sbjct: 181 PNKGGGQGGGMGGGPGGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMH 240
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
+ F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 241 KHFVQFGPIQDVRVFKDKGFAFIKFVTKEAAARAIEHTHNSEVHGNQVKCFWGK 294
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 327
D+ T++VGNLDS V+++ L LFS G + KI P F++++ A A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGHVKSCKIIREPGNDPYAFIEYSTYQAATTA 61
Query: 328 LRMLNGTQLGGQNIRLSWGRSPSNK 352
L +N + I+++W SP N+
Sbjct: 62 LTAMNKRLFLDKEIKVNWATSPGNQ 86
>gi|255732850|ref|XP_002551348.1| predicted protein [Candida tropicalis MYA-3404]
gi|240131089|gb|EER30650.1| predicted protein [Candida tropicalis MYA-3404]
Length = 810
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 120/214 (56%), Gaps = 32/214 (14%)
Query: 73 QQQGQPGEI---RTLWIGDLQYWMDETYL-NTCFAHTGEVVAVKVIR--NKQTGQI---- 122
Q G GE+ RTLW+GDL W+DE + + ++ + V +K+I+ N +T
Sbjct: 97 QDPGSSGELDKPRTLWMGDLDPWLDENAIQDLWWSILQKKVTIKIIKPKNPKTDPTFHGL 156
Query: 123 --EGYGFIEFISRAGAERVLQTFNGTPMP---------------NGEQNFRLNWASFGAG 165
GY F+EF S A++ L + NG +P N ++ FRLNWAS GA
Sbjct: 157 TNSGYCFVEFESFEDAQQAL-SLNGQLLPDIAMPSQQHFPNNPDNQKKYFRLNWAS-GAT 214
Query: 166 EKRD--DTPDHTIFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLTGRTKGYGFVR 222
TP+ ++FVGDL+A T+ L F+ +P S K +V+ D ++G+++ +GFVR
Sbjct: 215 LSAPIVQTPEFSLFVGDLSASTTEAHLLAFFQKTFPNSIKTVRVMTDPISGKSRCFGFVR 274
Query: 223 FGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
F +ESE+ RA+ EMNGV+ + RP+R+ AT + T
Sbjct: 275 FTEESERQRALVEMNGVWFAGRPLRVALATPRIT 308
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 53/82 (64%)
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
DPNNTTVFVG L S V + L LF +G + VKIP GK CGFV+++ R AEEA+ +
Sbjct: 445 DPNNTTVFVGGLSSEVNEPTLYTLFKPFGMIQQVKIPPGKNCGFVKYSTRDEAEEAIAAM 504
Query: 332 NGTQLGGQNIRLSWGRSPSNKQ 353
G +GG +RLSWGR N +
Sbjct: 505 QGFIIGGNRVRLSWGRVSMNNK 526
>gi|23928438|gb|AAN40024.1| putative oligouridylate binding protein [Zea mays]
Length = 639
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 143/285 (50%), Gaps = 30/285 (10%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
R++++G++ + +T L F G V K+IR +++ +GFI++ R A +
Sbjct: 118 CRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSS----FGFIDYYDRRYAALAI 173
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYP 199
+ NG + Q ++NWA R+DT H IFVGDL +VTD L F Y
Sbjct: 174 LSLNGRQLYG--QPIKVNWAY--TSTPREDTSGHFNIFVGDLCPEVTDATLFAFFSG-YS 228
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN------ 253
+ A+V+ D+ TGR++G+GFV F ++ + A+ ++NG + R +R AT
Sbjct: 229 TCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCNWATKGANAGE 288
Query: 254 -----KKTVSASYQNSQVAQ---SDDDPNN----TTVFVGNL--DSIVTDEHLRELFSQY 299
V S +S+ + +DD P N TTV+VGNL ++ + D HL
Sbjct: 289 EKQILDTKVDLSNGSSESGKENPNDDGPENNPQFTTVYVGNLPHEATMNDVHLFFHSLGA 348
Query: 300 GQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 344
G + V++ K GFV+++ A A++M NG +GG+ I+ S
Sbjct: 349 GSIEEVRVTRDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQIKSS 393
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 23/189 (12%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VTD +LQE F++ P +G K++ +GF+ + D
Sbjct: 114 DSSTCRSVYVGNIHLQVTDTVLQEVFQSIGP-VEGCKLI----RKEKSSFGFIDYYDRRY 168
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ +NG +P+++ A +D + +FVG+L VT
Sbjct: 169 AALAILSLNGRQLYGQPIKVNWAYTS------------TPREDTSGHFNIFVGDLCPEVT 216
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ ++ G FV F ++ A+ A+ LNG LG + IR
Sbjct: 217 DATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIR 276
Query: 343 LSWGRSPSN 351
+W +N
Sbjct: 277 CNWATKGAN 285
>gi|242076392|ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
Length = 664
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 136/265 (51%), Gaps = 20/265 (7%)
Query: 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
QP +L++GDL+ + ++ L F+ G+VV+V+V R+ + + GY ++ F + A
Sbjct: 41 QPLPTTSLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFSNPLDA 100
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
R L+ N + N + R+ +++ +R + + IF+ +L + + L ETF +
Sbjct: 101 ARALEVLNFAVLNN--KPIRVMYSNRDPSSRRSGSAN--IFIKNLDKTIDNKTLHETF-S 155
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+ + KV +D G++KG+GFV++ E A+ +NG+ + +P+ +GP K+
Sbjct: 156 SFGTILSCKVAMDE-AGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFVGPFLRKQE 214
Query: 257 VSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL----VHVKIPAGKR 312
S+ ++ NN VFV NL T E L ++F +YG + V + + R
Sbjct: 215 RDHSFDKTKF-------NN--VFVKNLSESTTKEDLLKVFGEYGSITSAVVMIGMDGKSR 265
Query: 313 C-GFVQFADRSCAEEALRMLNGTQL 336
C GF+ F + A A++ LNG ++
Sbjct: 266 CFGFINFENPDAASRAVQELNGKKI 290
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 139/283 (49%), Gaps = 19/283 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L+ F+ G +++ KV + + GQ +G+GF+++ A+ +++
Sbjct: 136 IFIKNLDKTIDNKTLHETFSSFGTILSCKVAMD-EAGQSKGFGFVQYEKEEAAQNAIKSL 194
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT----IFVGDLAADVTDYMLQETFRARYP 199
NG + N + F F ++RD + D T +FV +L+ T L + F Y
Sbjct: 195 NGM-LINDKPVF---VGPFLRKQERDHSFDKTKFNNVFVKNLSESTTKEDLLKVF-GEYG 249
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
S A V+I + G+++ +GF+ F + RA+ E+NG + + +G A K
Sbjct: 250 SITSAVVMIG-MDGKSRCFGFINFENPDAASRAVQELNGKKINDKEWYVGRAQKKSEREM 308
Query: 260 SYQNS---QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AGK 311
+ + + D +++ NLD + D+ LRELFS +G++ K+ K
Sbjct: 309 ELKRRFEQSLKDAADKYQGLNLYLKNLDDSIGDDQLRELFSNFGKITSYKVMRDQNGLSK 368
Query: 312 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 354
GFV F+ R A +AL +NG + G+ + +++ + +++A
Sbjct: 369 GSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKA 411
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 83/201 (41%), Gaps = 27/201 (13%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L + L F G + + V+ G+ +GFI F + A R
Sbjct: 223 KFNNVFVKNLSESTTKEDLLKVFGEYGSITSA-VVMIGMDGKSRCFGFINFENPDAASRA 281
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRD--------------DTPDH----TIFVGDL 181
+Q NG + + E W A +K + D D +++ +L
Sbjct: 282 VQELNGKKINDKE------WYVGRAQKKSEREMELKRRFEQSLKDAADKYQGLNLYLKNL 335
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
+ D L+E F + + KV+ D+ G +KG GFV F E +A+TEMNG
Sbjct: 336 DDSIGDDQLRELF-SNFGKITSYKVMRDQ-NGLSKGSGFVAFSTREEASQALTEMNGKMI 393
Query: 242 STRPMRIGPATNKKTVSASYQ 262
S +P+ + A K+ A Q
Sbjct: 394 SGKPLYVAFAQRKEDRKAMLQ 414
>gi|15227815|ref|NP_179916.1| poly(A) binding protein 4 [Arabidopsis thaliana]
gi|2642429|gb|AAB87097.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|15292851|gb|AAK92796.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|19310779|gb|AAL85120.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|330252352|gb|AEC07446.1| poly(A) binding protein 4 [Arabidopsis thaliana]
Length = 662
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 139/287 (48%), Gaps = 19/287 (6%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ L++ +L +D L+ F+ G +V+ KV + GQ GYGF++F + A+ +
Sbjct: 133 VGNLFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATD-HMGQSRGYGFVQFDTEDSAKNAI 191
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH----TIFVGDLAADVTDYMLQETFRA 196
+ NG + N +Q F F E+R+ D ++V +L+ TD L+ TF
Sbjct: 192 EKLNGKVL-NDKQIF---VGPFLRKEERESAADKMKFTNVYVKNLSEATTDDELKTTF-G 246
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+Y S A V+ D G+++ +GFV F + + RA+ +NG + +G A K
Sbjct: 247 QYGSISSAVVMRDG-DGKSRCFGFVNFENPEDAARAVEALNGKKFDDKEWYVGKAQKKSE 305
Query: 257 VSASYQNSQVAQSDDDPNN---TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAG 310
S D N ++V NLD VTDE LRELF+++G + K+ P+G
Sbjct: 306 RELELSRRYEQGSSDGGNKFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSG 365
Query: 311 --KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ S A L +NG +GG+ + ++ + ++A+
Sbjct: 366 TSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQRKEERRAK 412
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 130/261 (49%), Gaps = 20/261 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ +L++GDL + + ++ L F +VV+V+V R+ T GYG++ + + AE+ +
Sbjct: 45 LCSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAM 104
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
Q N + + NG+ R+ ++S + +R + +FV +L V + L E F +
Sbjct: 105 QKLNYSYL-NGKM-IRITYSSRDSSARRSGVGN--LFVKNLDKSVDNKTLHEAFSG-CGT 159
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
KV D + G+++GYGFV+F E A+ ++NG + + + +GP K+
Sbjct: 160 IVSCKVATDHM-GQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFLRKE----- 213
Query: 261 YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL---VHVKIPAGK-RC-GF 315
+ + D T V+V NL TD+ L+ F QYG + V ++ GK RC GF
Sbjct: 214 ----ERESAADKMKFTNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGF 269
Query: 316 VQFADRSCAEEALRMLNGTQL 336
V F + A A+ LNG +
Sbjct: 270 VNFENPEDAARAVEALNGKKF 290
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 21/198 (10%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L + L T F G + + V+R+ G+ +GF+ F + A R
Sbjct: 223 KFTNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGD-GKSRCFGFVNFENPEDAARA 281
Query: 140 LQTFNGTPMPNGE---------------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
++ NG + E + R S G K D ++V +L
Sbjct: 282 VEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGL---NLYVKNLDDT 338
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
VTD L+E F A + + KV+ D +G +KG GFV F SE R + EMNG +
Sbjct: 339 VTDEKLRELF-AEFGTITSCKVMRDP-SGTSKGSGFVAFSAASEASRVLNEMNGKMVGGK 396
Query: 245 PMRIGPATNKKTVSASYQ 262
P+ + A K+ A Q
Sbjct: 397 PLYVALAQRKEERRAKLQ 414
>gi|13430610|gb|AAK25927.1|AF360217_1 putative poly(A) binding protein [Arabidopsis thaliana]
Length = 662
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 139/287 (48%), Gaps = 19/287 (6%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ L++ +L +D L+ F+ G +V+ KV + GQ GYGF++F + A+ +
Sbjct: 133 VGNLFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATD-HMGQSRGYGFVQFDTEDSAKNAI 191
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH----TIFVGDLAADVTDYMLQETFRA 196
+ NG + N +Q F F E+R+ D ++V +L+ TD L+ TF
Sbjct: 192 EKLNGKVL-NDKQIF---VGPFLRKEERESAADKMKFTNVYVKNLSEATTDDELKTTF-G 246
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+Y S A V+ D G+++ +GFV F + + RA+ +NG + +G A K
Sbjct: 247 QYGSISSAVVMRDG-DGKSRCFGFVNFENPEDAARAVEALNGKKFDDKEWYVGKAQKKSE 305
Query: 257 VSASYQNSQVAQSDDDPNN---TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAG 310
S D N ++V NLD VTDE LRELF+++G + K+ P+G
Sbjct: 306 RELELSRRYEQGSSDGGNKFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSG 365
Query: 311 --KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ S A L +NG +GG+ + ++ + ++A+
Sbjct: 366 TSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQRKEERRAK 412
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 130/261 (49%), Gaps = 20/261 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ +L++GDL + + ++ L F +VV+V+V R+ T GYG++ + + AE+ +
Sbjct: 45 LCSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAM 104
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
Q N + + NG+ R+ ++S + +R + +FV +L V + L E F +
Sbjct: 105 QKLNYSYL-NGKM-IRITYSSRDSSARRSGVGN--LFVKNLDKSVDNKTLHEAFSG-CGT 159
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
KV D + G+++GYGFV+F E A+ ++NG + + + +GP K+
Sbjct: 160 IVSCKVATDHM-GQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFLRKE----- 213
Query: 261 YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL---VHVKIPAGK-RC-GF 315
+ + D T V+V NL TD+ L+ F QYG + V ++ GK RC GF
Sbjct: 214 ----ERESAADKMKFTNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGF 269
Query: 316 VQFADRSCAEEALRMLNGTQL 336
V F + A A+ LNG +
Sbjct: 270 VNFENPEDAARAVEALNGKKF 290
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 21/198 (10%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L + L T F G + + V+R+ G+ +GF+ F + A R
Sbjct: 223 KFTNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGD-GKSRCFGFVNFENPEDAARA 281
Query: 140 LQTFNGTPMPNGE---------------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
++ NG + E + R S G K D ++V +L
Sbjct: 282 VEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGL---NLYVKNLDDT 338
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
VTD L+E F A + + KV+ D +G +KG GFV F SE R + EMNG +
Sbjct: 339 VTDEKLRELF-AEFGTITSCKVMRDP-SGTSKGSGFVAFSAASEASRVLNEMNGKMVGGK 396
Query: 245 PMRIGPATNKKTVSASYQ 262
P+ + A K+ A Q
Sbjct: 397 PLYVALAQRKEERRAKLQ 414
>gi|281346697|gb|EFB22281.1| hypothetical protein PANDA_002889 [Ailuropoda melanoleuca]
Length = 377
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 137/281 (48%), Gaps = 23/281 (8%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F+ G K+I + T + Y F+EF A L N
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAAMN 58
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYMLQET 193
G + E ++NWA+ + +K+D + DH +FVGDL+ ++T ++
Sbjct: 59 GRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 116
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT
Sbjct: 117 F-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 175
Query: 254 KKTVSASYQNSQVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 306
K S S Q D P+N TV+ G + S +T++ +R+ FS +GQ++ ++
Sbjct: 176 KPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIR 235
Query: 307 IPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
+ K FV+F A A+ +NGT + G ++ WG+
Sbjct: 236 VFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGK 276
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 27/174 (15%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL + + FA G + +V+++ TG+ +GYGF+ F ++ AE +Q
Sbjct: 99 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 158
Query: 144 NGTPMPNGEQNFRLNWA------------------SFGAGEKRDDTPDHTIFVGDLAADV 185
G + G + R NWA S+ + + T++ G + + +
Sbjct: 159 GGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 216
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV 239
T+ ++++TF + + +V D KGY FVRF A+ +NG
Sbjct: 217 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 263
>gi|393216132|gb|EJD01623.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 937
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 111/235 (47%), Gaps = 51/235 (21%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLN-TCFAHTGEVVAVKVIR---NKQTGQ---IE 123
PP Q TLW GDL+ WMDE Y C + V VK+ + TGQ
Sbjct: 206 PPHAHKQSVSHSTLWWGDLEPWMDEEYAKQVCDIMGWDQVTVKIPHAPSDSVTGQQPNNP 265
Query: 124 GYGFIEFISRAGAERVLQTFNGTP-------MPNGEQNFRLNWAS----------FGAGE 166
GY F+ F S A VL N +PN + F LNWAS F
Sbjct: 266 GYCFLTFPSPQHAATVLSQINNASSGGTQAILPNSTKPFALNWASSPSPSPVTQTFPINT 325
Query: 167 KRDDTP------------DHTIFVGDLAADVTDYMLQETFRA--------RYP------- 199
D P +++IFVGDLA + ++ L FR R P
Sbjct: 326 TVDRPPSTGTLNNQGQQKEYSIFVGDLAPETSNSDLVAVFRNPVLGLRNDRAPKFIRPFH 385
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
S K AK+++D +TG ++GYGFVRF +E++Q RA+ EM+G++C +RPMRI PAT K
Sbjct: 386 SCKSAKIMLDPVTGVSRGYGFVRFTEEADQQRALIEMHGLYCLSRPMRISPATAK 440
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 55/77 (71%)
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
DP NTTVFVG L +++++ LR F+ +G + +VK+PAGK CGFVQF ++ AE A+ +
Sbjct: 575 DPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPAGKHCGFVQFVRKADAERAIERM 634
Query: 332 NGTQLGGQNIRLSWGRS 348
G +GG IRLSWGRS
Sbjct: 635 QGFPIGGSRIRLSWGRS 651
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA G++ VKV K G F++F+ +A AER ++
Sbjct: 580 TVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPAGKHCG------FVQFVRKADAERAIER 633
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 634 MQGFPI--GGSRIRLSW 648
>gi|326526505|dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 140/278 (50%), Gaps = 20/278 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + + L F+ G VV+V+V R+ T GY ++ F S A A R L+
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEM 102
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ NG+ R+ +++ ++ + IF+ +L + + L +TF A + +
Sbjct: 103 LNFTPV-NGKP-IRIMYSNRDPSSRKSGAAN--IFIKNLDKSIDNKALYDTFSA-FGNIL 157
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KV + ++G +KGYGFV++ + A+ E+NG+ + + + +GP K+ +
Sbjct: 158 SCKVATE-MSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFG 216
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG---QLVHVKIPAGK-RC-GFVQ 317
+ P V+V NL T+++L+ELF +G ++ V+ GK RC GFV
Sbjct: 217 S---------PKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVN 267
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
F + A A+ LNG + + + + + S ++ Q
Sbjct: 268 FENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQ 305
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 141/287 (49%), Gaps = 22/287 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L F+ G +++ KV + +G+ +GYGF+++ A+ +
Sbjct: 131 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVA-TEMSGESKGYGFVQYEQDESAQNAINE 189
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDD---TPD-HTIFVGDLAADVTDYMLQETFRARY 198
NG + + ++ F ++R++ +P + ++V +L+ T+ L+E F
Sbjct: 190 LNGMLL----NDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFG 245
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT-- 256
P T + +V+ G+++ +GFV F + + + A+ ++NG + + +G A K
Sbjct: 246 PIT--SVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSERE 303
Query: 257 --VSASYQNSQVAQSDDDPNNTTVFVGNLD-SIVTDEHLRELFSQYGQLVHVKIP----- 308
+ S++ S ++ D T +++ NLD S+ DE L+ELF+++G + K+
Sbjct: 304 MQLKESFEKSN-KETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNG 362
Query: 309 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F A AL +NG +G + + ++ + ++A+
Sbjct: 363 VNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRAR 409
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 18/197 (9%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L E L F + G + +V V+R G+ +GF+ F + A
Sbjct: 219 KFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHA 277
Query: 140 LQTFNGTPMPN-----------GEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVT 186
++ NG + E+ +L SF K D +++ +L V
Sbjct: 278 VEDLNGKKFDDKELYVGRAQKKSEREMQLKE-SFEKSNKETADRNQGTNLYLKNLDGSVD 336
Query: 187 D-YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
D L+E F A + + KV+ D G KG GFV F + RA+ MNG ++P
Sbjct: 337 DDEKLKELF-AEFGTITSCKVMRDS-NGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKP 394
Query: 246 MRIGPATNKKTVSASYQ 262
+ + A K+ A Q
Sbjct: 395 LYVALAQRKEERRARLQ 411
>gi|189239005|ref|XP_974444.2| PREDICTED: similar to tRNA selenocysteine associated protein
(secp43) [Tribolium castaneum]
Length = 299
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 102/175 (58%), Gaps = 7/175 (4%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M ET++ + F GE + VKV+RNK TG+ GY F+ F + A +
Sbjct: 14 LWMGSLEPYMTETFIISAFRKMGENPLNVKVMRNKFTGEAAGYCFVHFANDEEAIDAMHK 73
Query: 143 FNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG P+P FRLN AS G D + +++VGDL+ DV DY L F ++Y +
Sbjct: 74 LNGKPIPGTTPVVRFRLNNAS-NTGRTLLDR-EFSVWVGDLSPDVDDYNLYRVFSSKYNT 131
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPATNK 254
K AKV++D +G +KGYGFVRFG E E ++T MNG + T+ ++I A K
Sbjct: 132 IKTAKVILDS-SGFSKGYGFVRFGSEDEMRDSLTTMNGYIGLGTKALKICNAVPK 185
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 18/177 (10%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L +T+ + FR + KV+ ++ TG GY FV F ++ E + AM +
Sbjct: 14 LWMGSLEPYMTETFIISAFRKMGENPLNVKVMRNKFTGEAAGYCFVHFANDEEAIDAMHK 73
Query: 236 MNGVFCSTRPM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
+NG +P+ P + +AS + + +V+VG+L V D +L
Sbjct: 74 LNG-----KPIPGTTPVVRFRLNNASNTGRTLLDRE-----FSVWVGDLSPDVDDYNLYR 123
Query: 295 LF-SQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
+F S+Y + K+ K GFV+F ++L +NG LG + +++
Sbjct: 124 VFSSKYNTIKTAKVILDSSGFSKGYGFVRFGSEDEMRDSLTTMNGYIGLGTKALKIC 180
>gi|302696241|ref|XP_003037799.1| hypothetical protein SCHCODRAFT_83732 [Schizophyllum commune H4-8]
gi|300111496|gb|EFJ02897.1| hypothetical protein SCHCODRAFT_83732 [Schizophyllum commune H4-8]
Length = 759
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 124/257 (48%), Gaps = 52/257 (20%)
Query: 46 PQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQP-----GEIRTLWIGDLQYWMDETYLN- 99
PQP+A P P +A P + GQP TL GDL+ WMDE Y
Sbjct: 131 PQPRASHPL-----PPNPFSAADTAPAFRPGQPQPNSAASKSTLIWGDLEPWMDEEYAKQ 185
Query: 100 TCFAHTGEVVAVKVIR---NKQTGQIE---GYGFIEFISRAGAERVLQTFN----GTP-- 147
C + V +KV + TGQ GY F+ F + A A VL N G P
Sbjct: 186 VCNLMGWDPVNIKVPHPQPDPATGQQANNPGYCFLTFPTPAHAASVLAQVNNNGTGGPVT 245
Query: 148 MPNGEQNFRLNWAS--------------FGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
MPN + F +NWA+ AG + +++IFVGDLA + ++ L
Sbjct: 246 MPNSSKAFVMNWAAGMPATSPVGNSFSAVNAGVQNQYPKEYSIFVGDLAPETSNSDLVAV 305
Query: 194 FRA--------RYP-------STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
FR R P S K AK+++D +TG ++GYGFVRF DE++Q RA+ EM+G
Sbjct: 306 FRNPVLGLRNDREPKFIRPFLSCKSAKIMLDPVTGVSRGYGFVRFTDEADQQRALIEMHG 365
Query: 239 VFCSTRPMRIGPATNKK 255
++C +RPMRI PAT K
Sbjct: 366 LYCLSRPMRISPATAKN 382
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 55/80 (68%)
Query: 269 SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEAL 328
+ DP NTTVFVG L +++++ LR F+ +G + +VK+P GK CGFVQF ++ AE A+
Sbjct: 539 TSTDPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAENAI 598
Query: 329 RMLNGTQLGGQNIRLSWGRS 348
+ G +GG IRLSWGRS
Sbjct: 599 EKMQGFPIGGSRIRLSWGRS 618
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA G++ VKV K GF++F+ +A AE ++
Sbjct: 547 TVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPVGKHC------GFVQFVRKADAENAIEK 600
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 601 MQGFPI--GGSRIRLSW 615
>gi|402891170|ref|XP_003908827.1| PREDICTED: nucleolysin TIA-1 isoform p40, partial [Papio anubis]
Length = 377
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 151/314 (48%), Gaps = 34/314 (10%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F+ G K+I + T + Y F+EF A L N
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAMN 58
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYMLQET 193
G + E ++NWA+ + +K+D + DH +FVGDL+ ++T ++
Sbjct: 59 GRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 116
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT
Sbjct: 117 F-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 175
Query: 254 KKTVSASYQNSQVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 306
K S S Q D P+N TV+ G + S +T++ +R+ FS +GQ++ ++
Sbjct: 176 KPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIR 235
Query: 307 IPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQ---PD 357
+ K FV+F A A+ +NGT + G ++ WG+ +P +Q Q P
Sbjct: 236 VFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPQ 295
Query: 358 P-NQWNAGYYGYAQ 370
P QW +YG AQ
Sbjct: 296 PYGQWGQ-WYGNAQ 308
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 27/174 (15%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL + + FA G + +V+++ TG+ +GYGF+ F ++ AE +Q
Sbjct: 99 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 158
Query: 144 NGTPMPNGEQNFRLNWA------------------SFGAGEKRDDTPDHTIFVGDLAADV 185
G + G + R NWA S+ + + T++ G + + +
Sbjct: 159 GGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 216
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV 239
T+ ++++TF + + +V D KGY FVRF A+ +NG
Sbjct: 217 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 263
>gi|270010282|gb|EFA06730.1| hypothetical protein TcasGA2_TC009661 [Tribolium castaneum]
Length = 294
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M ET++ + F GE + VKV+RNK TG+ GY F+ F + A +
Sbjct: 9 LWMGSLEPYMTETFIISAFRKMGENPLNVKVMRNKFTGEAAGYCFVHFANDEEAIDAMHK 68
Query: 143 FNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG P+P FRLN AS G D + +++VGDL+ DV DY L F ++Y +
Sbjct: 69 LNGKPIPGTTPVVRFRLNNAS-NTGRTLLDR-EFSVWVGDLSPDVDDYNLYRVFSSKYNT 126
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRIGPAT 252
K AKV++D +G +KGYGFVRFG E E ++T MNG + T+ ++I A
Sbjct: 127 IKTAKVILDS-SGFSKGYGFVRFGSEDEMRDSLTTMNGYIGLGTKALKICNAV 178
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 18/177 (10%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L +T+ + FR + KV+ ++ TG GY FV F ++ E + AM +
Sbjct: 9 LWMGSLEPYMTETFIISAFRKMGENPLNVKVMRNKFTGEAAGYCFVHFANDEEAIDAMHK 68
Query: 236 MNGVFCSTRPM-RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
+NG +P+ P + +AS + + +V+VG+L V D +L
Sbjct: 69 LNG-----KPIPGTTPVVRFRLNNASNTGRTLLDRE-----FSVWVGDLSPDVDDYNLYR 118
Query: 295 LF-SQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNG-TQLGGQNIRLS 344
+F S+Y + K+ K GFV+F ++L +NG LG + +++
Sbjct: 119 VFSSKYNTIKTAKVILDSSGFSKGYGFVRFGSEDEMRDSLTTMNGYIGLGTKALKIC 175
>gi|241998018|ref|XP_002433652.1| tRNA selenocysteine associated protein, putative [Ixodes
scapularis]
gi|215495411|gb|EEC05052.1| tRNA selenocysteine associated protein, putative [Ixodes
scapularis]
Length = 181
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 97/170 (57%), Gaps = 13/170 (7%)
Query: 89 LQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTP 147
L+ MDE ++ F GE V VK+IRN+ TG GYGF++F A+R L NG P
Sbjct: 1 LEPTMDEYFVQQAFTMMGENPVHVKIIRNRITGMPRGYGFLDFGDEEAAQRALLRCNGRP 60
Query: 148 MPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVV 207
+PN Q + + ++FVGDL+++V D L F RYPS K AKVV
Sbjct: 61 IPNATQGVSPSLL----------PREFSMFVGDLSSEVDDVHLYHAFSQRYPSVKAAKVV 110
Query: 208 IDRLTGRTKGYGFVRFGDESEQLRAMTEM-NGVFCSTRPMRIGPATNKKT 256
+D+ +G +KG+GFVRF DESE A+ +M + + ++P+R+G A ++
Sbjct: 111 LDQ-SGLSKGFGFVRFSDESEYQEALVDMQHSLLVGSKPIRVGVANPRRV 159
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 26/164 (15%)
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
+Y +Q+ F + K++ +R+TG +GYGF+ FGDE RA+ NG RP+
Sbjct: 7 EYFVQQAFTMMGENPVHVKIIRNRITGMPRGYGFLDFGDEEAAQRALLRCNG-----RPI 61
Query: 247 RIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQY------G 300
+ VS S P ++FVG+L S V D HL FSQ
Sbjct: 62 ----PNATQGVSPSLL----------PREFSMFVGDLSSEVDDVHLYHAFSQRYPSVKAA 107
Query: 301 QLVHVKIPAGKRCGFVQFADRSCAEEAL-RMLNGTQLGGQNIRL 343
++V + K GFV+F+D S +EAL M + +G + IR+
Sbjct: 108 KVVLDQSGLSKGFGFVRFSDESEYQEALVDMQHSLLVGSKPIRV 151
>gi|300175779|emb|CBK21322.2| unnamed protein product [Blastocystis hominis]
Length = 320
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 98/175 (56%), Gaps = 4/175 (2%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
RTLWIGD+Q E YL + + ++K++R++ T + G+GFI+F + A L
Sbjct: 3 RTLWIGDVQENWTEDYLCALMRNAKGLSSIKLMRDRTTNESLGFGFIDFATEEDAIHALN 62
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPD-HTIFVGDLAADVTDYMLQETFRARYPS 200
+NG P+P FRLN FG + + D + +++GDL + VTD L FR +Y S
Sbjct: 63 GYNGRPIPGTGYTFRLN---FGGNSRNLNLGDNYCLYIGDLESSVTDTQLYTIFRDKYLS 119
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255
GAK++ + T +KGYGF++F E A+ EMNG + RP+++ A ++
Sbjct: 120 FCGAKIMRETGTSVSKGYGFIQFRARDEAETALKEMNGYVINGRPIKLSYAAARR 174
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 21/181 (11%)
Query: 174 HTIFVGDLAADVT-DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
T+++GD+ + T DY+ A+ S+ K++ DR T + G+GF+ F E + + A
Sbjct: 3 RTLWIGDVQENWTEDYLCALMRNAKGLSS--IKLMRDRTTNESLGFGFIDFATEEDAIHA 60
Query: 233 MTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 292
+ NG RP+ T + + +N + +N +++G+L+S VTD L
Sbjct: 61 LNGYNG-----RPIPGTGYTFRLNFGGNSRNLNLG------DNYCLYIGDLESSVTDTQL 109
Query: 293 RELF-SQYGQLVHVKI------PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 345
+F +Y KI K GF+QF R AE AL+ +NG + G+ I+LS+
Sbjct: 110 YTIFRDKYLSFCGAKIMRETGTSVSKGYGFIQFRARDEAETALKEMNGYVINGRPIKLSY 169
Query: 346 G 346
Sbjct: 170 A 170
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 79 GEIRTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAE 137
G+ L+IGDL+ + +T L T F K++R T +GYGFI+F +R AE
Sbjct: 90 GDNYCLYIGDLESSVTDTQLYTIFRDKYLSFCGAKIMRETGTSVSKGYGFIQFRARDEAE 149
Query: 138 RVLQTFNG 145
L+ NG
Sbjct: 150 TALKEMNG 157
>gi|126304035|ref|XP_001381740.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Monodelphis domestica]
Length = 409
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 162/343 (47%), Gaps = 42/343 (12%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F+ G K+I + T + Y F+EF A L N
Sbjct: 24 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAAMN 81
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTP----------DH-TIFVGDLAADVTDYMLQET 193
G + E ++NWA+ + +K+D + DH +FVGDL+ ++T ++
Sbjct: 82 GRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTLRSQDHFHVFVGDLSPEITTEDIKAA 139
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F A + A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT
Sbjct: 140 F-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 198
Query: 254 KKTV-SASYQNSQVAQSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 306
K ++Y+++ S DD P+N TV+ G + S +T++ +R+ FS +GQ++ ++
Sbjct: 199 KPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIR 258
Query: 307 IPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR------SPSNKQAQPDPNQ 360
+ K FV+F A A+ +NGT + G ++ WG+ +P +Q Q
Sbjct: 259 VFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMLNPVQQQNQ----- 313
Query: 361 WNAGYYGYAQGYENYGYAAAAPQDPSMYY-GGY--PGYGNYQQ 400
GY Q Y +G Q Y G+ P YG Y Q
Sbjct: 314 -----IGYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQ 351
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 27/174 (15%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL + + FA G + +V+++ TG+ +GYGF+ F ++ AE +Q
Sbjct: 122 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 181
Query: 144 NGTPMPNGEQNFRLNWA---------SFGAGEKR---DDTPDH------TIFVGDLAADV 185
G + G + R NWA ++ + K+ DD + T++ G + + +
Sbjct: 182 GGQWL--GGRQIRTNWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGL 239
Query: 186 TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV 239
T+ ++++TF + + +V D KGY FVRF A+ +NG
Sbjct: 240 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 286
>gi|297301957|ref|XP_001098541.2| PREDICTED: nucleolysin TIAR isoform 5 [Macaca mulatta]
Length = 506
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 122/236 (51%), Gaps = 13/236 (5%)
Query: 152 EQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRL 211
+ ++NWA+ + +K+D + +FVGDL+ ++T ++ F A + A+VV D
Sbjct: 206 DSEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAF-APFGKISDARVVKDMA 264
Query: 212 TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQ--- 268
TG++KGYGFV F ++ + A+ M G + R +R AT K S Q + Q
Sbjct: 265 TGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRF 324
Query: 269 ----SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 324
+ P N TV+ G + S +TD+ +R+ FS +GQ++ +++ K FV+F+ A
Sbjct: 325 EDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESA 384
Query: 325 EEALRMLNGTQLGGQNIRLSWGR-SPSNKQA--QPDPNQWN--AGYYGYAQGYENY 375
A+ +NGT + G ++ WG+ SP + Q D +QW + YG Q Y Y
Sbjct: 385 AHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQY 440
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 38/210 (18%)
Query: 48 PQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE 107
P ++ WAT P Q+ +++GDL + + + FA G+
Sbjct: 205 PDSEVKVNWAT-----------TPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGK 253
Query: 108 VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------ 161
+ +V+++ TG+ +GYGF+ F ++ AE + G + G + R NWA+
Sbjct: 254 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAP 311
Query: 162 ------------FGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVID 209
F + + T++ G +A+ +TD ++++TF S G + I
Sbjct: 312 KSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTF-----SPFGQIMEIR 366
Query: 210 RLTGRTKGYGFVRFGDESEQLRAMTEMNGV 239
KGY FVRF A+ +NG
Sbjct: 367 VFP--EKGYSFVRFSTHESAAHAIVSVNGT 394
>gi|344232977|gb|EGV64850.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 617
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 116/212 (54%), Gaps = 36/212 (16%)
Query: 79 GEIRTLWIGDLQYWMDETYLNTCFAHT-GEVVAVKVIR----------NKQTGQIE--GY 125
G RTLW+GDL W+DE + + + V++K+IR N +G + GY
Sbjct: 76 GTPRTLWMGDLDPWLDELGIEHLWWQILRKKVSIKLIRPKIPKQDMGYNMYSGGLSHSGY 135
Query: 126 GFIEFISRAGAERVLQTFNGTPMP---------------NGEQNFRLNWASFGAGEKRD- 169
FIEF + A+ L + NG +P N ++ FRLNWAS GA
Sbjct: 136 CFIEFETFEDAKYAL-SLNGQLLPDVAIPSQTQFPNNPDNQKKYFRLNWAS-GATLSAPI 193
Query: 170 -DTPDHTIFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLTGRTKGYGFVRFGDES 227
+P++++FVGDL+A T+ L F+ +P S K +V+ D + G+++ +GFVRF DES
Sbjct: 194 VQSPEYSLFVGDLSASTTEAHLLAFFQKSFPRSVKTVRVMTDPVNGKSRCFGFVRFTDES 253
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPAT---NKKT 256
E+ RA+ EMNGV+ RP+R+ AT NKK+
Sbjct: 254 ERQRALHEMNGVWFGGRPLRVALATPRYNKKS 285
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRS 322
N+Q Q +DP NTTVFVG L S V+++ L LF +G + +KIP GK CGFV+++ R
Sbjct: 381 NNQHGQPYNDPTNTTVFVGGLSSEVSEQTLFALFQPFGVVQQIKIPPGKNCGFVKYSTRE 440
Query: 323 CAEEALRMLNGTQLGGQNIRLSWGR-SPSNKQAQ 355
AE+A+ + G +GG +RLSWGR S +NK+ Q
Sbjct: 441 EAEDAIASMQGYIIGGNRVRLSWGRVSVNNKKFQ 474
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 277 TVFVGNLDSIVTDEHLRELFSQ-------YGQLVHVKIPAGKRC-GFVQFADRSCAEEAL 328
++FVG+L + T+ HL F + +++ + RC GFV+F D S + AL
Sbjct: 200 SLFVGDLSASTTEAHLLAFFQKSFPRSVKTVRVMTDPVNGKSRCFGFVRFTDESERQRAL 259
Query: 329 RMLNGTQLGGQNIRLSWGRSPSNKQA 354
+NG GG+ +R++ NK++
Sbjct: 260 HEMNGVWFGGRPLRVALATPRYNKKS 285
>gi|268578407|ref|XP_002644186.1| Hypothetical protein CBG17168 [Caenorhabditis briggsae]
Length = 244
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 102/175 (58%), Gaps = 4/175 (2%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+FVGDL+ DV++ +L+ TF+ ++ AKV+ D T ++KGYGFV F ++ A++
Sbjct: 7 VFVGDLSKDVSNELLKSTFQ-KFGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAISG 65
Query: 236 MNGVFCSTRPMRIGPATNKKTVSASYQNS--QVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
MNG + R +R A K + + + QV S +NT+V+VGN+ TD LR
Sbjct: 66 MNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTK-ADNTSVYVGNISPQTTDVDLR 124
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
+ FS YG + V++ +R FV++ + CA +A+ +NG +L G +R SWGR+
Sbjct: 125 DSFSTYGDIAEVRVFKTQRYAFVRYEKKECATKAIMEMNGKELAGNQVRCSWGRT 179
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 23/203 (11%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL + L + F GEV KVIR+ QT + +GYGF+ F ++ AE +
Sbjct: 7 VFVGDLSKDVSNELLKSTFQKFGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAISGM 66
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDD-----------TPDHT-IFVGDLAADVTDYMLQ 191
NG + G++ R NWA+ E+ D D+T ++VG+++ TD L+
Sbjct: 67 NGKWI--GKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISPQTTDVDLR 124
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
++F + Y +V +T+ Y FVR+ + +A+ EMNG + +R
Sbjct: 125 DSF-STYGDIAEVRVF------KTQRYAFVRYEKKECATKAIMEMNGKELAGNQVRCSWG 177
Query: 252 TNKKTVSASYQNSQVAQSDDDPN 274
+ + +N + SD PN
Sbjct: 178 RTQAVIEI--ENHIIVFSDLQPN 198
>gi|328709618|ref|XP_003244016.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Acyrthosiphon pisum]
Length = 347
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 12/196 (6%)
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEF 130
PQ + ++W+G L+ +M E+++ F GE VK++RNK TG+ GY F++F
Sbjct: 60 PQASTAGQNVSSVWMGSLEPYMTESFITGAFQKMGEYPKNVKLMRNKNTGETAGYAFVDF 119
Query: 131 ISRAGAERVLQTFNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDY 188
V+ NG +P N F+LN A G+ D ++++G+L++DV DY
Sbjct: 120 YDPVS---VMHKLNGKYIPGTNPPVRFKLNRAG-NPGKITTSNRDFSVWLGELSSDVDDY 175
Query: 189 MLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV-FCSTRPMR 247
L +TF RY S + AKVV+D G +KGYGF+RFG E EQ + MNG ++P++
Sbjct: 176 QLYKTFACRYQSIRTAKVVLDS-AGYSKGYGFIRFGSEEEQKHCLNNMNGFPGLGSKPIK 234
Query: 248 IG---PATNKKTVSAS 260
+ P + V AS
Sbjct: 235 VSSVIPKSEHHIVVAS 250
>gi|302767104|ref|XP_002966972.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
gi|300164963|gb|EFJ31571.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
Length = 654
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 133/277 (48%), Gaps = 23/277 (8%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + ET L T F+ G V +V+V R+ T + GYG++ + S A A R ++
Sbjct: 39 SLYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAMEA 98
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ NG + R+ W+ ++ + IF+ +L + + L +TF A P
Sbjct: 99 LNYTPI-NG-KTIRIMWSHRDPSTRKSGVGN--IFIKNLDESIDNKALHDTFIAFGPIL- 153
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY- 261
I GR+KGYGFV F + A+ ++NG+ KK A +
Sbjct: 154 --SCKIAHQDGRSKGYGFVHFETDEAANLAIEKVNGMQL----------VGKKVFVAKFV 201
Query: 262 QNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-----PAGKRCGFV 316
+ S + + T VFV NLD + +E ++E FS +G + +V I K GFV
Sbjct: 202 KRSDRLAATGETKFTNVFVKNLDPEMAEEEIKEHFSTFGVITNVVIMKDENDKSKGFGFV 261
Query: 317 QFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
F D A A+ +N +QLG + I + + + ++
Sbjct: 262 NFDDPEAARAAVETMNNSQLGSRTIYVGRAQKKAERE 298
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 120/279 (43%), Gaps = 20/279 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L+ F G +++ K+ Q G+ +GYGF+ F + A +
Sbjct: 125 VGNIFIKNLDESIDNKALHDTFIAFGPILSCKIAH--QDGRSKGYGFVHFETDEAANLAI 182
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
+ NG + G++ F A F R T F ++ M +E + + S
Sbjct: 183 EKVNGMQLV-GKKVF---VAKFVKRSDRLAATGETKFTNVFVKNLDPEMAEEEIKEHF-S 237
Query: 201 TKGA---KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--- 254
T G V++ ++KG+GFV F D A+ MN +R + +G A K
Sbjct: 238 TFGVITNVVIMKDENDKSKGFGFVNFDDPEAARAAVETMNNSQLGSRTIYVGRAQKKAER 297
Query: 255 -KTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP----- 308
+ + ++ ++ Q ++V NLD + DE L++ FS+YG + K+
Sbjct: 298 EQILRRQFEEKRMEQFQKY-QGANLYVKNLDDSIDDETLKQEFSRYGNITSAKVMRDEKG 356
Query: 309 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
K GFV F A A NG + G+ I ++ +
Sbjct: 357 ISKGFGFVCFTSPEEASRAATETNGLMINGKPIYVAMAQ 395
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 19/187 (10%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++ +L M E + F+ G + V VI + + +G+GF+ F A ++T
Sbjct: 218 VFVKNLDPEMAEEEIKEHFSTFGVITNV-VIMKDENDKSKGFGFVNFDDPEAARAAVETM 276
Query: 144 NGTPMPNGEQNFRLNWASFGAG----------EKRDDTPDH----TIFVGDLAADVTDYM 189
N + + G + + A A EKR + ++V +L + D
Sbjct: 277 NNSQL--GSRTIYVGRAQKKAEREQILRRQFEEKRMEQFQKYQGANLYVKNLDDSIDDET 334
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
L++ F +RY + AKV+ D G +KG+GFV F E RA TE NG+ + +P+ +
Sbjct: 335 LKQEF-SRYGNITSAKVMRDE-KGISKGFGFVCFTSPEEASRAATETNGLMINGKPIYVA 392
Query: 250 PATNKKT 256
A K+
Sbjct: 393 MAQRKEI 399
>gi|432097499|gb|ELK27684.1| Polyadenylate-binding protein 4-like protein [Myotis davidii]
Length = 370
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 138/278 (49%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V+++++ R+ T GY ++ F+ A A+R L T
Sbjct: 11 SLYVGDLPPDVTENMLFLKFSTVGTVLSIRICRDLVTRCSLGYAYVNFLHVADAQRALDT 70
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + Q+ RL W+ A ++ + +F+ +L + + L E F +
Sbjct: 71 MNFDVIQG--QSIRLMWSQRDAYLRKSGIGN--VFIKNLDKSIDNKTLYEHFSV-FGKIL 125
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
+KV+ D R GYGFV F +++ RA+ EMNGV + +GP N++ A Q
Sbjct: 126 SSKVMCDDQGSR--GYGFVHFQNQAAADRAIEEMNGVLLKDFRLFVGPFKNRRDREAELQ 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
N T +++ N + DE L+E FS YG++V VK+ +GK GFV
Sbjct: 184 NKA-------SEFTNIYIKNFGDEMDDEKLKEFFSHYGKIVSVKVMTDSSGKSKGFGFVS 236
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
F A+ A+ ++NG ++ GQ + + + + +QA+
Sbjct: 237 FDTHEAAKRAVDIVNGREIFGQQVFVGRAQKKAERQAE 274
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 144/305 (47%), Gaps = 36/305 (11%)
Query: 55 MWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI 114
MW+ + A + +G+ ++I +L +D L F+ G++++ KV+
Sbjct: 84 MWSQRDAYLRKSGIG-------------NVFIKNLDKSIDNKTLYEHFSVFGKILSSKVM 130
Query: 115 RNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG-----AGEKRD 169
+ Q + GYGF+ F ++A A+R ++ NG + ++FRL F E ++
Sbjct: 131 CDDQGSR--GYGFVHFQNQAAADRAIEEMNGVLL----KDFRLFVGPFKNRRDREAELQN 184
Query: 170 DTPDHT-IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
+ T I++ + ++ D L+E F + Y KV+ D +G++KG+GFV F
Sbjct: 185 KASEFTNIYIKNFGDEMDDEKLKEFF-SHYGKIVSVKVMTDS-SGKSKGFGFVSFDTHEA 242
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQN--SQVAQSDD-DPNNTTVFVGNLDS 285
RA+ +NG + + +G A K A + Q Q T ++V NLD
Sbjct: 243 AKRAVDIVNGREIFGQQVFVGRAQKKAERQAELKQLFEQRKQERSWRVRGTKIYVKNLDE 302
Query: 286 IVTDEHLRELFSQYGQLVHVKI--PAGKRCGF--VQFADRSCAEEALRMLNGTQLGGQ-- 339
+ +E LR+ FS +G ++ VK+ G+ GF + F+ A A+ +NG LG +
Sbjct: 303 TIDEEKLRKAFSSFGSIIRVKVMQEEGRSRGFGLICFSSPEEAARAMAEMNGRLLGSKPV 362
Query: 340 NIRLS 344
NI L+
Sbjct: 363 NIALA 367
>gi|448520574|ref|XP_003868310.1| Ngr1 protein [Candida orthopsilosis Co 90-125]
gi|380352650|emb|CCG25406.1| Ngr1 protein [Candida orthopsilosis]
Length = 696
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 138/267 (51%), Gaps = 49/267 (18%)
Query: 17 AAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQG 76
A+HQ+Q +Q+ S Y + PP Q A+ A Q + + G++ P
Sbjct: 61 ASHQHQQEQELL---------SEYTVPNPPISTTQSNAVAAEQDSI--SGGISEQP---- 105
Query: 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIE---------GYGF 127
RTLW+GDL W+DE + + + + V I +T +++ GY F
Sbjct: 106 -----RTLWMGDLDSWLDEKQITDLWWNLLKKKVVVKIIKPKTLKLDPQFQGLTNSGYCF 160
Query: 128 IEFISRAGAERVLQTFNGTPMP---------------NGEQNFRLNWASFGAGEKRD--D 170
+EF + A++ L + NG +P N ++ FRLNWAS GA
Sbjct: 161 VEFETFEDAQQAL-SLNGQLLPDIAMPSQQVYPNNPDNQKKYFRLNWAS-GATLSAPIVQ 218
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
P++++FVGDL+A T+ L F+ ++P S K +V+ D ++G+++ +GFVRF +ESE+
Sbjct: 219 MPEYSLFVGDLSASTTEAHLLAFFQKKFPNSIKTVRVMTDPVSGKSRCFGFVRFTEESER 278
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKKT 256
RA+ EMNGV+ + RP+R+ AT + T
Sbjct: 279 QRALNEMNGVWFAGRPLRVALATPRST 305
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
DPNNTTVFVG L S VT+ L LF +G + +KIP GK CGFV+++ R AE + +
Sbjct: 422 DPNNTTVFVGGLSSEVTEATLFTLFKPFGVIQQIKIPPGKNCGFVKYSTREEAERTIGAM 481
Query: 332 NGTQLGGQNIRLSWGR-SPSNKQAQ 355
G +GG +RLSWGR S +NK+ Q
Sbjct: 482 QGFIIGGNRVRLSWGRVSMNNKKYQ 506
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 21/142 (14%)
Query: 277 TVFVGNLDSIVTDEHLRELFSQY--GQLVHVKI----PAGK-RC-GFVQFADRSCAEEAL 328
++FVG+L + T+ HL F + + V++ +GK RC GFV+F + S + AL
Sbjct: 223 SLFVGDLSASTTEAHLLAFFQKKFPNSIKTVRVMTDPVSGKSRCFGFVRFTEESERQRAL 282
Query: 329 RMLNGTQLGGQNIRLSWG--RSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPS 386
+NG G+ +R++ RS + ++ N N + ++ GY + ++AP P
Sbjct: 283 NEMNGVWFAGRPLRVALATPRSTNYRKFGKSNNNNNVPFSSHS-GYYSPETTSSAPMPPE 341
Query: 387 MYY----------GGYPGYGNY 398
M + GG P +G +
Sbjct: 342 MMFIPPGAPQNQIGGSPLFGYF 363
>gi|326492626|dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511122|dbj|BAJ87575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 139/277 (50%), Gaps = 20/277 (7%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
L++GDL + + L F+ G VV+V+V R+ T GY ++ F S A A R L+
Sbjct: 44 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 103
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKG 203
N TP+ NG+ R+ +++ ++ + IF+ +L + + L +TF A + +
Sbjct: 104 NFTPV-NGKP-IRIMYSNRDPSSRKSGAAN--IFIKNLDKSIDNKALYDTFSA-FGNILS 158
Query: 204 AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQN 263
KV + ++G +KGYGFV++ + A+ E+NG+ + + + +GP K+ + +
Sbjct: 159 CKVATE-MSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGS 217
Query: 264 SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG---QLVHVKIPAGK-RC-GFVQF 318
P V+V NL T+++L+ELF +G ++ V+ GK RC GFV F
Sbjct: 218 ---------PKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNF 268
Query: 319 ADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A A+ LNG + + + + + S ++ Q
Sbjct: 269 ENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQ 305
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 141/287 (49%), Gaps = 22/287 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L F+ G +++ KV + +G+ +GYGF+++ A+ +
Sbjct: 131 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVA-TEMSGESKGYGFVQYEQDESAQNAINE 189
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDD---TPD-HTIFVGDLAADVTDYMLQETFRARY 198
NG + + ++ F ++R++ +P + ++V +L+ T+ L+E F
Sbjct: 190 LNGMLL----NDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFG 245
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT-- 256
P T + +V+ G+++ +GFV F + + + A+ ++NG + + +G A K
Sbjct: 246 PIT--SVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSERE 303
Query: 257 --VSASYQNSQVAQSDDDPNNTTVFVGNLD-SIVTDEHLRELFSQYGQLVHVKIP----- 308
+ S++ S ++ D T +++ NLD S+ DE L+ELF+++G + K+
Sbjct: 304 MQLKESFEKSN-KETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNG 362
Query: 309 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F A AL +NG +G + + ++ + ++A+
Sbjct: 363 VNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRAR 409
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 18/197 (9%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L E L F + G + +V V+R G+ +GF+ F + A
Sbjct: 219 KFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHA 277
Query: 140 LQTFNGTPMPN-----------GEQNFRLNWASFGAGEKR--DDTPDHTIFVGDLAADVT 186
++ NG + E+ +L SF K D +++ +L V
Sbjct: 278 VEDLNGKKFDDKELYVGRAQKKSEREMQLKE-SFEKSNKETADRNQGTNLYLKNLDGSVD 336
Query: 187 D-YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245
D L+E F A + + KV+ D G KG GFV F + RA+ MNG ++P
Sbjct: 337 DDEKLKELF-AEFGTITSCKVMRDS-NGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKP 394
Query: 246 MRIGPATNKKTVSASYQ 262
+ + A K+ A Q
Sbjct: 395 LYVALAQRKEERRARLQ 411
>gi|297821595|ref|XP_002878680.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
gi|297324519|gb|EFH54939.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
Length = 655
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 143/288 (49%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ L++ +L +D L+ F+ G +V+ KV + GQ GYGF++F + A+ +
Sbjct: 128 VGNLFVKNLDKSVDNKTLHETFSGCGTIVSCKVAAD-HMGQSRGYGFVQFDTEDSAKNAI 186
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH----TIFVGDLAADVTDYMLQETFRA 196
+ NG + N +Q F F E+R+ D ++V +L+ TD L+ TF
Sbjct: 187 EKLNGKVL-NDKQIF---VGPFLRKEERESAADKMKFTNVYVKNLSEVTTDDELKTTF-G 241
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+Y S A V+ D G+++ +GFV F + + RA+ +NG + +G A KK+
Sbjct: 242 QYGSISSAVVMRDG-DGKSRCFGFVNFENPEDAARAVEALNGKKFDDKEWYVGKA-QKKS 299
Query: 257 VSASYQNSQVAQSDDDPNNT----TVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PA 309
+ + Q D N ++V NLD VTDE LRELF+++G + K+ P+
Sbjct: 300 ERELELSRRYEQGSSDAGNKFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPS 359
Query: 310 G--KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
G K GFV F+ S A L +NG +GG+ + ++ + ++A+
Sbjct: 360 GTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQRKEERRAK 407
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 133/263 (50%), Gaps = 20/263 (7%)
Query: 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAER 138
G + +L++GDL + + ++ L F +VV+V+V R+ T GYG++ + + AE+
Sbjct: 38 GALCSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTEDAEK 97
Query: 139 VLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARY 198
+Q N + + NG+ R+ ++S + +R + +FV +L V + L ETF
Sbjct: 98 AMQKLNYSTL-NGKM-IRITYSSRDSSARRSGVGN--LFVKNLDKSVDNKTLHETFSG-C 152
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
+ KV D + G+++GYGFV+F E A+ ++NG + + + +GP K+
Sbjct: 153 GTIVSCKVAADHM-GQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFLRKE--- 208
Query: 259 ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL---VHVKIPAGK-RC- 313
+ + D T V+V NL + TD+ L+ F QYG + V ++ GK RC
Sbjct: 209 ------ERESAADKMKFTNVYVKNLSEVTTDDELKTTFGQYGSISSAVVMRDGDGKSRCF 262
Query: 314 GFVQFADRSCAEEALRMLNGTQL 336
GFV F + A A+ LNG +
Sbjct: 263 GFVNFENPEDAARAVEALNGKKF 285
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 21/198 (10%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L + L T F G + + V+R+ G+ +GF+ F + A R
Sbjct: 218 KFTNVYVKNLSEVTTDDELKTTFGQYGSISSAVVMRDGD-GKSRCFGFVNFENPEDAARA 276
Query: 140 LQTFNGTPMPNGE---------------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
++ NG + E + R S AG K D ++V +L
Sbjct: 277 VEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDAGNKFDGL---NLYVKNLDDT 333
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
VTD L+E F A + + KV+ D +G +KG GFV F SE R + EMNG +
Sbjct: 334 VTDEKLRELF-AEFGTITSCKVMRDP-SGTSKGSGFVAFSAASEASRVLNEMNGKMVGGK 391
Query: 245 PMRIGPATNKKTVSASYQ 262
P+ + A K+ A Q
Sbjct: 392 PLYVALAQRKEERRAKLQ 409
>gi|238881096|gb|EEQ44734.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 875
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 118/213 (55%), Gaps = 30/213 (14%)
Query: 82 RTLWIGDLQYWMDETYL-NTCFAHTGEVVAVKVIR--------NKQTGQIEGYGFIEFIS 132
RTLW+GDL W+DE + + ++ + V VK+I+ N Q GY F+EF S
Sbjct: 140 RTLWMGDLDPWLDENAIQDLWWSILQKKVVVKIIKPKNMKPDINFQGLTNSGYCFVEFES 199
Query: 133 RAGAERVLQTFNGTPMP---------------NGEQNFRLNWASFGAGEKRD--DTPDHT 175
A+ L + NG +P N ++ FRLNWAS GA TP+++
Sbjct: 200 FEDAQHAL-SLNGQLLPDIAMPSQSNFPNNPDNQKKYFRLNWAS-GATLSAPIVQTPEYS 257
Query: 176 IFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+FVGDL+A T+ L F+ +P S K +V+ D ++G+++ +GFVRF +ESE+ RA+
Sbjct: 258 LFVGDLSASTTEAHLLAFFQKNFPNSIKTVRVMTDPISGKSRCFGFVRFTEESERQRALI 317
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVA 267
EMNG + + RP+R+ AT + V+ + N + +
Sbjct: 318 EMNGAWFAGRPLRVALAT-PRNVARRFNNRRFS 349
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
DPNNTTVFVG L S V++ L LF +G + VKIP GK CGFV++++R AEEA+ +
Sbjct: 509 DPNNTTVFVGGLSSDVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYSNREEAEEAIAAM 568
Query: 332 NGTQLGGQNIRLSWGR-SPSNKQ 353
G +GG +RLSWGR S SNK+
Sbjct: 569 QGFVIGGNRVRLSWGRVSVSNKK 591
>gi|452819166|gb|EME26242.1| oligouridylate-binding protein, putative [Galdieria sulphuraria]
gi|452825749|gb|EME32744.1| oligouridylate-binding protein, putative [Galdieria sulphuraria]
Length = 309
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 132/291 (45%), Gaps = 29/291 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++G+L + L F G V KV+ ++ TG+ G+GF++F R A R ++
Sbjct: 14 SLYVGNLDPRVCTELLQEIFELIGPVKLAKVVGDRNTGRSLGFGFVDFYDRPTAIRAMEL 73
Query: 143 FNGTPMPNGEQNFRLNWASFGAG------EKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
+G + Q R++WA GAG + D HTIFVG+L DV + L + F +
Sbjct: 74 MHGRRVYG--QEIRIDWAHAGAGAAGRILQDEDLANMHTIFVGNLGPDVDEEKLMKAFSS 131
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+ S GAK+ D TG GYGFV F ++ + AM M G S R +RI A K
Sbjct: 132 -FSSVAGAKISKDVETGLPAGYGFVSFREKKDADLAMQTMTGYILSGRALRIDWARGKNA 190
Query: 257 VSASYQ-------------NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
+ Q DP N +V+V L S + +RE F +G +
Sbjct: 191 ARGVSTFGSFSSSTVTPKPDIQTIMKQTDPLNVSVYVRGLPSDIDVAAIRESFRGFGDIE 250
Query: 304 HVKIPAGKRC-------GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
VKIP R FV+F A A+ ++G ++ G ++ WGR
Sbjct: 251 DVKIPDAARMTAQDRIYAFVKFKSHEVAARAIHDMHGKEIAGCVVQCEWGR 301
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 28/183 (15%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ T+++G+L +DE L F+ V K+ ++ +TG GYGF+ F + A+ +
Sbjct: 108 MHTIFVGNLGPDVDEEKLMKAFSSFSSVAGAKISKDVETGLPAGYGFVSFREKKDADLAM 167
Query: 141 QTFNGTPMPNGEQNFRLNWA------------------------SFGAGEKRDDTPDHTI 176
QT G + + R++WA K+ D + ++
Sbjct: 168 QTMTGYILSG--RALRIDWARGKNAARGVSTFGSFSSSTVTPKPDIQTIMKQTDPLNVSV 225
Query: 177 FVGDLAADVTDYMLQETFRARYPSTKGAKV-VIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+V L +D+ ++E+FR + + K+ R+T + + Y FV+F RA+ +
Sbjct: 226 YVRGLPSDIDVAAIRESFRG-FGDIEDVKIPDAARMTAQDRIYAFVKFKSHEVAARAIHD 284
Query: 236 MNG 238
M+G
Sbjct: 285 MHG 287
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 273 PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEE 326
P+ +++VGNLD V E L+E+F G + K+ + G FV F DR A
Sbjct: 10 PSGMSLYVGNLDPRVCTELLQEIFELIGPVKLAKVVGDRNTGRSLGFGFVDFYDRPTAIR 69
Query: 327 ALRMLNGTQLGGQNIRLSW 345
A+ +++G ++ GQ IR+ W
Sbjct: 70 AMELMHGRRVYGQEIRIDW 88
>gi|367030019|ref|XP_003664293.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
gi|347011563|gb|AEO59048.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
Length = 787
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 138/293 (47%), Gaps = 19/293 (6%)
Query: 54 AMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKV 113
A +Q A P AG P P +L++G+L + E L F+ G V +++V
Sbjct: 37 ASGESQTAEPDTAG-PTPSSSAPHPQSSASLYVGELDPSVTEAMLFELFSQIGSVASIRV 95
Query: 114 IRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPD 173
R+ T + GY ++ + S A E+ L+ N T + + R+ W+ ++ T
Sbjct: 96 CRDAVTRRSLGYAYVNYNSTADGEKALEELNYTLIKG--RPCRIMWSQRDPALRK--TGQ 151
Query: 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM 233
+F+ +L + + L +TF A + + KV D G +KGYGFV + + +A+
Sbjct: 152 GNVFIKNLDTAIDNKALHDTF-AAFGNILSCKVAQDE-NGNSKGYGFVHYETDEAAAQAI 209
Query: 234 TEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLR 293
+NG+ + + + +G KK + ++ + N T V+V N++ VT+E R
Sbjct: 210 KHVNGMLLNEKKVYVGYHIPKKDRQSKFEEMKA-------NYTNVYVKNINLEVTEEEFR 262
Query: 294 ELFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
ELFS+YG++ + + GFV F+ A +A+ LNG + GQ +
Sbjct: 263 ELFSKYGEVTSSTLARDQEGKSRGFGFVNFSTHDSAAKAVEELNGKEFRGQEL 315
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 109/230 (47%), Gaps = 8/230 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G +++ KV ++ + G +GYGF+ + + A + ++
Sbjct: 153 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-ENGNSKGYGFVHYETDEAAAQAIKH 211
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH--TIFVGDLAADVTDYMLQETFRARYPS 200
NG + + + K ++ + ++V ++ +VT+ +E F ++Y
Sbjct: 212 VNGMLLNEKKVYVGYHIPKKDRQSKFEEMKANYTNVYVKNINLEVTEEEFRELF-SKYGE 270
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
+ + D+ G+++G+GFV F +A+ E+NG + + +G A K
Sbjct: 271 VTSSTLARDQ-EGKSRGFGFVNFSTHDSAAKAVEELNGKEFRGQELYVGRAQKKHEREEE 329
Query: 261 YQNSQVAQSDDDPNN---TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 307
+ S A + N +++ NL + D+ LR++FS++G + K+
Sbjct: 330 LRKSYEAARAEKANKYQGVNLYIKNLADDIDDDKLRQMFSEFGPITSAKV 379
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+++VG+L VT+ ML E F ++ S +V D +T R+ GY +V + ++ +A+
Sbjct: 65 SLYVGELDPSVTEAMLFELF-SQIGSVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALE 123
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
E+N RP RI + + + Q + VF+ NLD+ + ++ L +
Sbjct: 124 ELNYTLIKGRPCRIMWSQRDPALRKTGQGN-------------VFIKNLDTAIDNKALHD 170
Query: 295 LFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP 349
F+ +G ++ K+ K GFV + A +A++ +NG L + + + +
Sbjct: 171 TFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPK 230
Query: 350 SNKQAQ 355
++Q++
Sbjct: 231 KDRQSK 236
>gi|254567738|ref|XP_002490979.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|238030776|emb|CAY68699.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|328352488|emb|CCA38887.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Komagataella pastoris CBS 7435]
Length = 626
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 132/264 (50%), Gaps = 18/264 (6%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ +L++G+L + E+ L F+ G V +++V R+ T + GYG++ F S+A ER L
Sbjct: 51 LASLYVGELDPTVTESDLYEFFSPIGSVNSIRVCRDAVTKRSLGYGYVNFHSQAAGERAL 110
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
+ N + RL W+ +R + + IF+ +L + + L +TF + +
Sbjct: 111 EELNYAEIKG--VRCRLMWSQRDPSLRRSGSGN--IFIKNLDPAIENKTLHDTF-SSFGK 165
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
KV D G +KG+GFV + + A+ +NG+ + R + +GP KK +
Sbjct: 166 VLSCKVATDE-NGNSKGFGFVHYESDEAAQAAIENINGMLLNGREIYVGPHLAKKDRESR 224
Query: 261 YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL--VHVKIPA---GKRCGF 315
+Q + N T VFV N D+ T++ LRELF YG + +H+++ + K GF
Sbjct: 225 FQ-------EMIKNYTNVFVKNFDTESTEDELRELFESYGPITSIHLQVDSEGHNKGFGF 277
Query: 316 VQFADRSCAEEALRMLNGTQLGGQ 339
V FA+ A +A+ LN + G+
Sbjct: 278 VNFAEHDDAVKAVEALNDKEYKGK 301
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 123/260 (47%), Gaps = 16/260 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L ++ L+ F+ G+V++ KV + + G +G+GF+ + S A+ ++
Sbjct: 141 NIFIKNLDPAIENKTLHDTFSSFGKVLSCKVATD-ENGNSKGFGFVHYESDEAAQAAIEN 199
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKR--DDTPDHT-IFVGDLAADVTDYMLQETFRARYP 199
NG + NG + + + E R + ++T +FV + + T+ L+E F + P
Sbjct: 200 INGMLL-NGREIYVGPHLAKKDRESRFQEMIKNYTNVFVKNFDTESTEDELRELFESYGP 258
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK---- 255
T + +D G KG+GFV F + + ++A+ +N +P+ +G A K
Sbjct: 259 IT-SIHLQVDS-EGHNKGFGFVNFAEHDDAVKAVEALNDKEYKGKPLYVGRAQKKNERVH 316
Query: 256 TVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 312
++ Y+ ++ + + +F+ NLD + D L E F +G + K+ GK
Sbjct: 317 ELTKKYEADRLEKL-QKYQSVNLFIKNLDESIDDARLEEEFKPFGTITSAKVMLDENGKS 375
Query: 313 CGFVQFADRSCAEEALRMLN 332
GF F S EEA + ++
Sbjct: 376 RGF-GFVCLSTPEEATKAIS 394
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 29/177 (16%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+++VG+L VT+ L E F + S +V D +T R+ GYG+V F ++ RA+
Sbjct: 53 SLYVGELDPTVTESDLYEFF-SPIGSVNSIRVCRDAVTKRSLGYGYVNFHSQAAGERALE 111
Query: 235 EMN-----GVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTD 289
E+N GV C + P+ + + +F+ NLD + +
Sbjct: 112 ELNYAEIKGVRCRLMWSQRDPSLRRS------------------GSGNIFIKNLDPAIEN 153
Query: 290 EHLRELFSQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
+ L + FS +G+++ K+ K GFV + A+ A+ +NG L G+ I
Sbjct: 154 KTLHDTFSSFGKVLSCKVATDENGNSKGFGFVHYESDEAAQAAIENINGMLLNGREI 210
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 93/198 (46%), Gaps = 20/198 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+++ + E L F G + ++ + + + G +G+GF+ F A + ++
Sbjct: 234 NVFVKNFDTESTEDELRELFESYGPITSIHLQVDSE-GHNKGFGFVNFAEHDDAVKAVEA 292
Query: 143 FN-----GTPMPNG---EQNFRLNWAS--FGAG--EKRDDTPDHTIFVGDLAADVTDYML 190
N G P+ G ++N R++ + + A EK +F+ +L + D L
Sbjct: 293 LNDKEYKGKPLYVGRAQKKNERVHELTKKYEADRLEKLQKYQSVNLFIKNLDESIDDARL 352
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+E F+ + + AKV++D G+++G+GFV E +A++EMN + +P+ +
Sbjct: 353 EEEFKP-FGTITSAKVMLDE-NGKSRGFGFVCLSTPEEATKAISEMNQRMVANKPLYVAL 410
Query: 251 ATNKKTVSASYQNSQVAQ 268
A K + + SQ+AQ
Sbjct: 411 AQPK-----AIRRSQLAQ 423
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 250 PATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-- 307
PAT+ + S ++S A +++VG LD VT+ L E FS G + +++
Sbjct: 30 PATSTEAAEESNESSTQASE----TLASLYVGELDPTVTESDLYEFFSPIGSVNSIRVCR 85
Query: 308 -PAGKRC---GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG-RSPSNKQA 354
KR G+V F ++ E AL LN ++ G RL W R PS +++
Sbjct: 86 DAVTKRSLGYGYVNFHSQAAGERALEELNYAEIKGVRCRLMWSQRDPSLRRS 137
>gi|68472181|ref|XP_719886.1| hypothetical protein CaO19.6790 [Candida albicans SC5314]
gi|68472416|ref|XP_719769.1| hypothetical protein CaO19.14082 [Candida albicans SC5314]
gi|46441601|gb|EAL00897.1| hypothetical protein CaO19.14082 [Candida albicans SC5314]
gi|46441727|gb|EAL01022.1| hypothetical protein CaO19.6790 [Candida albicans SC5314]
Length = 887
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 118/213 (55%), Gaps = 30/213 (14%)
Query: 82 RTLWIGDLQYWMDETYL-NTCFAHTGEVVAVKVIR--------NKQTGQIEGYGFIEFIS 132
RTLW+GDL W+DE + + ++ + V VK+I+ N Q GY F+EF S
Sbjct: 138 RTLWMGDLDPWLDENAIQDLWWSILQKKVVVKIIKPKNMKPDINFQGLTNSGYCFVEFES 197
Query: 133 RAGAERVLQTFNGTPMP---------------NGEQNFRLNWASFGAGEKRD--DTPDHT 175
A+ L + NG +P N ++ FRLNWAS GA TP+++
Sbjct: 198 FEDAQHAL-SLNGQLLPDIAMPSQSNFPNNPDNQKKYFRLNWAS-GATLSAPIVQTPEYS 255
Query: 176 IFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+FVGDL+A T+ L F+ +P S K +V+ D ++G+++ +GFVRF +ESE+ RA+
Sbjct: 256 LFVGDLSASTTEAHLLAFFQKNFPNSIKTVRVMTDPISGKSRCFGFVRFTEESERQRALI 315
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVA 267
EMNG + + RP+R+ AT + V+ + N + +
Sbjct: 316 EMNGAWFAGRPLRVALAT-PRNVARRFNNRRFS 347
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
DPNNTTVFVG L S V++ L LF +G + VKIP GK CGFV++++R AEEA+ +
Sbjct: 517 DPNNTTVFVGGLSSDVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYSNREEAEEAIAAM 576
Query: 332 NGTQLGGQNIRLSWGR-SPSNKQ 353
G +GG +RLSWGR S SNK+
Sbjct: 577 QGFVIGGNRVRLSWGRVSVSNKK 599
>gi|260942869|ref|XP_002615733.1| hypothetical protein CLUG_04615 [Clavispora lusitaniae ATCC 42720]
gi|238851023|gb|EEQ40487.1| hypothetical protein CLUG_04615 [Clavispora lusitaniae ATCC 42720]
Length = 462
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 138/303 (45%), Gaps = 42/303 (13%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+GDL E + + GE AVK+IR+K G+ + Y F+ F S +
Sbjct: 80 LWMGDLDPQWTEASIADLWKQMGEEPTAVKIIRDK-MGKSQ-YCFVTFPSSNAVASAISK 137
Query: 143 FNGTPMPNGEQNFRLNWASFG--AGEKRDDT------------------PDHTIFVGDLA 182
+P + F+LNWAS G+ R + +++IFVGDLA
Sbjct: 138 HRAQ-VPGSSRFFKLNWASGSNPGGDARSNAGPGNRLSNASGSRLSKPQQEYSIFVGDLA 196
Query: 183 ADVTDYMLQETFRARYPS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
+DV++ +L F YP K K++ D TG KG+GFVRF Q A+ + +
Sbjct: 197 SDVSESLLYTHFDKEYPGLVKQVKIMTDPHTGANKGFGFVRFVSPEAQQAALQDNKSIVI 256
Query: 242 STRPMRIGPATN---------KKT-------VSASYQNSQVAQS-DDDPNNTTVFVGNLD 284
+ R +R+G A KKT +++ Q A S DPNN+ + + +
Sbjct: 257 NQRKVRVGQANGGNQDASSALKKTSTEQPIPTTSNLSQQQPALSPSTDPNNSVICLHGIT 316
Query: 285 SIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 344
S +TD+ L F +G +++ ++ +++ RS ++ AL + G + G + L
Sbjct: 317 SSITDDDLLAHFLPFGHIIYCRLNHVSGTAHIKYLLRSASQRALVFMQGVSICGNRLTLQ 376
Query: 345 WGR 347
WGR
Sbjct: 377 WGR 379
>gi|157114083|ref|XP_001657973.1| nucleolysin tia-1 [Aedes aegypti]
gi|108877443|gb|EAT41668.1| AAEL006710-PA [Aedes aegypti]
Length = 453
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 135/289 (46%), Gaps = 17/289 (5%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F G V + K+IR + + Y FIE+ + A+ L
Sbjct: 8 KTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASS---DPYAFIEYANHQSAQTALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N E ++NWA+ G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRLFLKKE--IKVNWATSPGNQPKTDTSQHHHIFVGDLSPEIETETLREAF-APFGE 121
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI--------GPAT 252
++V D T +++GY FV F ++E A+ MNG + +R +R P
Sbjct: 122 ISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKPPAPRE 181
Query: 253 NKKTV-SASYQNSQVAQSDDDPNNTTVFVGNL-DSIVTDEHLRELFSQYGQLVHVKIPAG 310
N K + S + ++ P NTTV+ G + + D + + F +GQ+ V++
Sbjct: 182 NIKGIKSGKTPGFEEIYNNTGPTNTTVYCGGFPANAINDMLIHKHFGLFGQIQDVRVFKD 241
Query: 311 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPN 359
K F++F ++ A A+ + +++ G ++ WG+ + A N
Sbjct: 242 KGYAFIKFNNKESAARAIEGTHNSEIQGYAVKCYWGKENGGEMASNGIN 290
>gi|357145576|ref|XP_003573691.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 663
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 142/278 (51%), Gaps = 20/278 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + + L F+ G VV+V+V R+ T GY ++ F S A A R ++
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAMEM 102
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ NG+ R+ +++ ++ + IF+ +L + + L +TF A + +
Sbjct: 103 LNFTPV-NGKP-IRIMYSNRDPSSRKSGAAN--IFIKNLDKSIDNKALFDTFSA-FGTIL 157
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KV + ++G +KGYGFV++ + A+ E+NG+ + + + +GP K+ +
Sbjct: 158 SCKVATE-ISGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFG 216
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG---QLVHVKIPAGK-RC-GFVQ 317
+ P V+V NL T+++L+E+F ++G ++ V+ GK RC GFV
Sbjct: 217 S---------PKFNNVYVKNLSESTTEDNLKEMFGKFGPITSVIVVRADDGKSRCFGFVN 267
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
F + A A+ LNG +L + + + + S ++ Q
Sbjct: 268 FENPDDAARAVEDLNGKKLDDKELYVGRAQKKSEREMQ 305
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 140/287 (48%), Gaps = 22/287 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L F+ G +++ KV + +G+ +GYGF+++ A+ +
Sbjct: 131 NIFIKNLDKSIDNKALFDTFSAFGTILSCKVA-TEISGESKGYGFVQYEQDESAQNAINE 189
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDD---TPD-HTIFVGDLAADVTDYMLQETFRARY 198
NG + + ++ F ++R++ +P + ++V +L+ T+ L+E F
Sbjct: 190 LNGMLL----NDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKEMFGKFG 245
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT-- 256
P T + +V+ G+++ +GFV F + + RA+ ++NG + + +G A K
Sbjct: 246 PIT--SVIVVRADDGKSRCFGFVNFENPDDAARAVEDLNGKKLDDKELYVGRAQKKSERE 303
Query: 257 --VSASYQNSQVAQSDDDPNNTTVFVGNLD-SIVTDEHLRELFSQYGQLVHVKIP----- 308
+ ++ S ++ D T +++ NLD S+ DE L+ELF+++G + K+
Sbjct: 304 MQLKEKFEKSN-KETADKNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNG 362
Query: 309 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F A AL +NG +G + + ++ + ++A+
Sbjct: 363 VNKGSGFVAFKSSEDASRALVAMNGKMVGSKPLYVALAQRKEERRAR 409
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 16/196 (8%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L E L F G + +V V+R G+ +GF+ F + A R
Sbjct: 219 KFNNVYVKNLSESTTEDNLKEMFGKFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAARA 277
Query: 140 LQTFNGTPMPN-----------GEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTD 187
++ NG + + E+ +L + ++ D T +++ +L V D
Sbjct: 278 VEDLNGKKLDDKELYVGRAQKKSEREMQLKEKFEKSNKETADKNQGTNLYLKNLDGSVDD 337
Query: 188 -YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
L+E F A + + KV+ D G KG GFV F + RA+ MNG ++P+
Sbjct: 338 DEKLKELF-AEFGTITSCKVMRDS-NGVNKGSGFVAFKSSEDASRALVAMNGKMVGSKPL 395
Query: 247 RIGPATNKKTVSASYQ 262
+ A K+ A Q
Sbjct: 396 YVALAQRKEERRARLQ 411
>gi|374671519|gb|AEZ56381.1| CBF-2 DNA-binding protein, partial [Dimocarpus longan]
Length = 84
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
Query: 124 GYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLA 182
GYGF+EF SRA AE+VLQ+++G+ MPN EQ FRLNWA+F AG++R + D +IFVGDLA
Sbjct: 1 GYGFVEFCSRAAAEKVLQSYSGSVMPNTEQPFRLNWATFSAGDRRTEAGSDLSIFVGDLA 60
Query: 183 ADVTDYMLQETFRARYPSTKGAKV 206
DVTD MLQ TF +++PS KGAKV
Sbjct: 61 PDVTDGMLQATFSSKFPSVKGAKV 84
>gi|190345927|gb|EDK37898.2| hypothetical protein PGUG_01996 [Meyerozyma guilliermondii ATCC
6260]
Length = 397
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 141/309 (45%), Gaps = 51/309 (16%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
L++G++ ++E YL+ F T +VK++ +K Y F+EF +R AE VL
Sbjct: 79 VLYVGNIPKTVNEQYLHELFDKTK---SVKLLHDKNKPGFN-YAFVEFDTREDAESVLTA 134
Query: 143 FNGTPMPNGEQNFRLNWA---SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
FNG+ + G + ++NWA S + ++P +TIFVGDL+A+V D L + F ++P
Sbjct: 135 FNGSEV--GGSSIKINWAYQSSTISTSSSPESPLYTIFVGDLSAEVDDETLGKAFD-QFP 191
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN-----K 254
S K A V+ D T R++GYGFV F D +E A+ M G F R +R A++ K
Sbjct: 192 SRKQAHVMWDMQTSRSRGYGFVSFADPAEAENALVTMPGSFIGGRAIRCNWASHRHMYQK 251
Query: 255 KTVSASYQNSQVAQSDD------------DPNN------------------------TTV 278
K + S A + D NN TTV
Sbjct: 252 KNTRPPPKRSASAGATTPPSPYTAQGYPIDTNNGGRNPQPQAPKSFEVVLRQAPNWQTTV 311
Query: 279 FVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGG 338
++GN+ L L +G +V K K C FV++ A A+ L G + G
Sbjct: 312 YLGNIAHFTHSSDLIPLLQNFGFIVDFKFHPSKGCAFVKYDSHERAALAIVQLAGYSVNG 371
Query: 339 QNIRLSWGR 347
+ ++ WGR
Sbjct: 372 RPLKCGWGR 380
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 274 NNTTVFVGNLDSIVTDEHLRELF--SQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
+NT ++VGN+ V +++L ELF ++ +L+H K G FV+F R AE L
Sbjct: 76 SNTVLYVGNIPKTVNEQYLHELFDKTKSVKLLHDKNKPGFNYAFVEFDTREDAESVLTAF 135
Query: 332 NGTQLGGQNIRLSW 345
NG+++GG +I+++W
Sbjct: 136 NGSEVGGSSIKINW 149
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 21/183 (11%)
Query: 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
+ + ++VG++ V + L E F TK K++ D+ Y FV F +
Sbjct: 74 EISNTVLYVGNIPKTVNEQYLHELF----DKTKSVKLLHDK-NKPGFNYAFVEFDTREDA 128
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNT-TVFVGNLDSIVT 288
+T NG ++I A YQ+S ++ S + T+FVG+L + V
Sbjct: 129 ESVLTAFNGSEVGGSSIKINWA---------YQSSTISTSSSPESPLYTIFVGDLSAEVD 179
Query: 289 DEHLRELFSQY--GQLVHV----KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
DE L + F Q+ + HV + + GFV FAD + AE AL + G+ +GG+ IR
Sbjct: 180 DETLGKAFDQFPSRKQAHVMWDMQTSRSRGYGFVSFADPAEAENALVTMPGSFIGGRAIR 239
Query: 343 LSW 345
+W
Sbjct: 240 CNW 242
>gi|17531963|ref|NP_495120.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
gi|373219011|emb|CCD65016.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
Length = 376
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 133/279 (47%), Gaps = 52/279 (18%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E RTL++G+L + E ++ T F G V KVI ++
Sbjct: 44 EPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE---------------------- 81
Query: 140 LQTFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRAR 197
++NWA G + + DT H +FVGDL+++V + L+E F+
Sbjct: 82 ---------------MKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQP- 125
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--- 254
+ AKV+ D T ++KGYGFV + E RA+ +MNG + R +R AT K
Sbjct: 126 FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGD 185
Query: 255 -----KTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 309
SY S D NT+V+VGN+ S+ DE +R+ F+ +G++ V+I
Sbjct: 186 QEKPSHYNEKSYDEIYNQTSGD---NTSVYVGNIASLTEDE-IRQGFASFGRITEVRIFK 241
Query: 310 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
+ FV+F ++ A +A+ +N +GGQ +R SWG++
Sbjct: 242 MQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGKT 280
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 32/187 (17%)
Query: 71 PPQQQGQPGEIRT--LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P QQQ + R +++GDL +D L F G+V KVIR+ T + +GYGF+
Sbjct: 90 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 149
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------- 174
+ R AER ++ NG + G + R NWA+ G++ + P H
Sbjct: 150 SYPKREEAERAIEQMNGQWL--GRRTIRTNWATRKPGDQ--EKPSHYNEKSYDEIYNQTS 205
Query: 175 ----TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+++VG++A+ +T+ +++ F A + ++ + +GY FV+F ++
Sbjct: 206 GDNTSVYVGNIAS-LTEDEIRQGF-ASFGRITEVRIF------KMQGYAFVKFDNKDAAA 257
Query: 231 RAMTEMN 237
+A+ +MN
Sbjct: 258 KAIVQMN 264
>gi|241953763|ref|XP_002419603.1| RNA-binding protein, putative; U1 snRNP protein, putative [Candida
dubliniensis CD36]
gi|223642943|emb|CAX43198.1| RNA-binding protein, putative [Candida dubliniensis CD36]
Length = 792
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 111/198 (56%), Gaps = 29/198 (14%)
Query: 82 RTLWIGDLQYWMDETYL-NTCFAHTGEVVAVKVIRNK--------QTGQIEGYGFIEFIS 132
RTLW+GDL W+DE + + ++ + V VK+I+ K Q GY F+EF S
Sbjct: 116 RTLWMGDLDPWLDENAIRDLWWSILQKKVVVKIIKPKNMKPDFSFQGLTNSGYCFVEFES 175
Query: 133 RAGAERVLQTFNGTPMP---------------NGEQNFRLNWASFGAGEKRD--DTPDHT 175
A+ L + NG +P N ++ FRLNWAS GA TP+++
Sbjct: 176 FEDAQHAL-SLNGQLLPDIAMPSQSNFPNNPDNQKKYFRLNWAS-GATLSAPIVQTPEYS 233
Query: 176 IFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+FVGDL+A T+ L F+ +P S K +V+ D ++G+++ +GFVRF +ESE+ RA+
Sbjct: 234 LFVGDLSASTTEAHLLAFFQKNFPNSIKTVRVMTDPISGKSRCFGFVRFTEESERQRALI 293
Query: 235 EMNGVFCSTRPMRIGPAT 252
EMNG + + RP+R+ AT
Sbjct: 294 EMNGAWFAGRPLRVALAT 311
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
DPNNTTVFVG L + V++ L LF +G + VKIP GK CGFV+++ R AEEA+ +
Sbjct: 461 DPNNTTVFVGGLSADVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYSTREEAEEAIAAM 520
Query: 332 NGTQLGGQNIRLSWGR-SPSNKQ 353
G +GG +RLSWGR S SNK+
Sbjct: 521 QGFVIGGNRVRLSWGRVSISNKK 543
>gi|328715704|ref|XP_001946343.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1
[Acyrthosiphon pisum]
Length = 419
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 108/203 (53%), Gaps = 7/203 (3%)
Query: 151 GEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVID 209
G + +LNW S G K D + H IFVGDL+ ++ L+E F A + +VV D
Sbjct: 71 GLKEMKLNWVSSPGPQLKADTSKHHHIFVGDLSPEIETQTLREAF-APFGEISDCRVVRD 129
Query: 210 RLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQS 269
T ++KGYGFV F ++E A+ MNG + +R +R AT K + N++
Sbjct: 130 PQTLKSKGYGFVSFLKKAEAESAIAAMNGQWLGSRSIRTNWATRKPPTLKTDSNTKPLTF 189
Query: 270 DD-----DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCA 324
D+ P N TV+ G L S +TDE +++ F+ +G + +++ K FV+FA + A
Sbjct: 190 DEVYNQSSPTNCTVYCGGLTSGLTDELVQKTFAPFGNIQEIRVFKDKGYAFVRFATKESA 249
Query: 325 EEALRMLNGTQLGGQNIRLSWGR 347
A+ ++ + + GQ ++ SWG+
Sbjct: 250 THAIVAVHNSDINGQPVKCSWGK 272
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 72 PQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFI 131
PQ + + +++GDL ++ L FA GE+ +V+R+ QT + +GYGF+ F+
Sbjct: 85 PQLKADTSKHHHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFL 144
Query: 132 SRAGAERVLQTFNGTPMPNGEQNFRLNWA----------------SFGAGEKRDDTPDHT 175
+A AE + NG + G ++ R NWA +F + + T
Sbjct: 145 KKAEAESAIAAMNGQWL--GSRSIRTNWATRKPPTLKTDSNTKPLTFDEVYNQSSPTNCT 202
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
++ G L + +TD ++Q+TF A + + + +V D KGY FVRF + A+
Sbjct: 203 VYCGGLTSGLTDELVQKTF-APFGNIQEIRVFKD------KGYAFVRFATKESATHAIVA 255
Query: 236 MNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNT 276
++ + +P++ S SQV S ++T
Sbjct: 256 VHNSDINGQPVKCSWGKESGEPIVSQNASQVCSSQAALSST 296
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 134/265 (50%), Gaps = 20/265 (7%)
Query: 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
QP +L++GDL+ + ++ L F+ G+VV+V+V R+ + + GY ++ + + A
Sbjct: 117 QPLPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDA 176
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
R ++ N P+ N + R+ +++ +R + + IF+ +L + + L +TF A
Sbjct: 177 ARAMEALNFAPLNN--KPIRVMYSNRDPSSRRSGSAN--IFIKNLDKTIDNKTLHDTFSA 232
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+ + KV +D + G++KG+GFV++ E AM +NG+ + +P+ +GP K+
Sbjct: 233 -FGAILSCKVAMDDI-GQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYVGPFLRKQ- 289
Query: 257 VSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL----VHVKIPAGKR 312
+ S D VFV NL T E L ++FS+YG + V + + R
Sbjct: 290 --------ERDNSSDKAKFNNVFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKSR 341
Query: 313 C-GFVQFADRSCAEEALRMLNGTQL 336
C GFV F A A+ LNG ++
Sbjct: 342 CFGFVNFESPDDAARAVEELNGKKI 366
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 139/283 (49%), Gaps = 19/283 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L+ F+ G +++ KV + GQ +G+GF+++ A+ +++
Sbjct: 212 IFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMD-DIGQSKGFGFVQYEKEESAQSAMKSL 270
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPD----HTIFVGDLAADVTDYMLQETFRARYP 199
NG + + + F ++RD++ D + +FV +L+ T L + F + Y
Sbjct: 271 NGMLINDKP----VYVGPFLRKQERDNSSDKAKFNNVFVKNLSESTTKEDLIKVF-SEYG 325
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
+ A V+I + G+++ +GFV F + RA+ E+NG + + +G A K
Sbjct: 326 TITSAVVMIG-MDGKSRCFGFVNFESPDDAARAVEELNGKKINDKEWYVGRAQKKSEREM 384
Query: 260 SYQNS---QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AGK 311
+ + + D +++ NLD +TD+ LRELFS +G++ KI K
Sbjct: 385 DLKRRFEQSMKDAADKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSK 444
Query: 312 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 354
GFV F+ R A +AL +NG + G+ + +++ + ++A
Sbjct: 445 GSGFVSFSTREEASQALTEMNGKMISGKPLYVAFAQRKEERKA 487
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 27/201 (13%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L + L F+ G + + V+ G+ +GF+ F S A R
Sbjct: 299 KFNNVFVKNLSESTTKEDLIKVFSEYGTITSA-VVMIGMDGKSRCFGFVNFESPDDAARA 357
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPD------------------HTIFVGDL 181
++ NG + + E W A +K + D +++ +L
Sbjct: 358 VEELNGKKINDKE------WYVGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNL 411
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
+TD L+E F + + K++ D+ G +KG GFV F E +A+TEMNG
Sbjct: 412 DDGITDDQLRELF-SNFGKITSCKIMRDQ-NGVSKGSGFVSFSTREEASQALTEMNGKMI 469
Query: 242 STRPMRIGPATNKKTVSASYQ 262
S +P+ + A K+ A Q
Sbjct: 470 SGKPLYVAFAQRKEERKAMLQ 490
>gi|335775520|gb|AEH58599.1| nucleolysin TIAR-like protein, partial [Equus caballus]
Length = 242
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 118/230 (51%), Gaps = 10/230 (4%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 6 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 63
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 64 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 122
Query: 245 PMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFS 297
+R AT K S Q + Q + P N TV+ G + S +TD+ +R+ FS
Sbjct: 123 QIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFS 182
Query: 298 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
+GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 183 PFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 232
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 69 AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFI 128
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+
Sbjct: 40 TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 99
Query: 129 EFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDD 170
F ++ AE + G + G + R NWA+ F +
Sbjct: 100 SFYNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSS 157
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+ T++ G +A+ +TD ++++TF + + +V + KGY FVRF
Sbjct: 158 PKNCTVYCGGIASGLTDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAA 210
Query: 231 RAMTEMNG 238
A+ +NG
Sbjct: 211 HAIVSVNG 218
>gi|195331490|ref|XP_002032434.1| GM23518 [Drosophila sechellia]
gi|194121377|gb|EDW43420.1| GM23518 [Drosophila sechellia]
Length = 464
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F+ G V + K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDTSVSEDLLIALFSTMGPVKSCKIIREPGN---DPYAFIEYSNYQAASTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWA-SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N E+ ++NWA S G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLFL--EKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 255 ------------------KTVSASYQNS-QVAQSDDDPNNTTVFVGNLD-SIVTDEHLRE 294
V S +++ + + P NTTV+ G ++++D+ + +
Sbjct: 181 ASKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 241 HFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGK 293
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 327
D+ T++VGNLD+ V+++ L LFS G + KI P F+++++ A A
Sbjct: 2 DESQPKTLYVGNLDTSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAASTA 61
Query: 328 LRMLNGTQLGGQNIRLSWGRSPSNK 352
L +N + I+++W SP N+
Sbjct: 62 LTAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|367004118|ref|XP_003686792.1| hypothetical protein TPHA_0H01520 [Tetrapisispora phaffii CBS 4417]
gi|357525094|emb|CCE64358.1| hypothetical protein TPHA_0H01520 [Tetrapisispora phaffii CBS 4417]
Length = 494
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 152/340 (44%), Gaps = 68/340 (20%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQ-----TGQIEG-- 124
Q QG+ + L++G L Y +E + + GE V+++ N Q G EG
Sbjct: 36 QTQGKGNNV--LYMGGLDYSWNEAVIKDIWNKVGEPATNVRMMWNMQFQHNNAGPTEGKS 93
Query: 125 ---YGFIEFISRAGAERVLQTFNGTPMPNGE-QNFRLNWASFG-----AGEKRDDTP--- 172
Y F+EF + A + NGT +P + + F+LNW+S A + P
Sbjct: 94 NLGYCFVEFSTHETASNAIMK-NGTMIPGYKGRYFKLNWSSGSSLSSSATHTENQGPQSN 152
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
D+++FVGDL +VT+ L F++ Y ST +K++ D LT +KGYGF++F D+++ A
Sbjct: 153 DYSVFVGDLGQNVTESQLYNLFKSHYASTLSSKIIHDPLTYISKGYGFIKFHDQNDYNDA 212
Query: 233 MTEMNGVFCSTRPMRIG-------------------------PATNKKTVSASYQNSQVA 267
+++M + R +++ P T T+++S +
Sbjct: 213 LSKMQNKILNGRGIKVRTVGNNDNNTTNKNVQFSNFRKDTFVPKTTSTTIASSATIVKPK 272
Query: 268 QSDD--------------------DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 307
Q D +P+NTT+ V N ++ + F +G L+ +
Sbjct: 273 QKQDRKLSNLVITKQVLPVLNDSTNPDNTTLVVSNASKDISMNEFKSYFLPFGNLIEISK 332
Query: 308 PAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
FV + DR CAE ++R+L G + G I+++WGR
Sbjct: 333 DPNTNILFVTYVDRICAENSMRILQGKVIRGNKIQIAWGR 372
>gi|24649513|ref|NP_732942.1| Rox8, isoform B [Drosophila melanogaster]
gi|24649515|ref|NP_732943.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301090|gb|AAF56224.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301091|gb|AAF56225.1| Rox8, isoform B [Drosophila melanogaster]
Length = 464
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F+ G V + K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGN---DPYAFIEYSNYQAATTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWA-SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N E+ ++NWA S G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLFL--EKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 255 ------------------KTVSASYQNS-QVAQSDDDPNNTTVFVGNLD-SIVTDEHLRE 294
V S +++ + + P NTTV+ G ++++D+ + +
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 241 HFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGK 293
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 327
D+ T++VGNLDS V+++ L LFS G + KI P F+++++ A A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTA 61
Query: 328 LRMLNGTQLGGQNIRLSWGRSPSNK 352
L +N + I+++W SP N+
Sbjct: 62 LTAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|356576101|ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
max]
Length = 652
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 151/310 (48%), Gaps = 36/310 (11%)
Query: 48 PQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE 107
P AQ A AT AP GVA+ G P +L++GDL+ ++E L F+ +
Sbjct: 8 PMAQSVAAAATPVIAP---GVALG----GGPFANASLYVGDLEGNVNEEQLYDLFSQVAQ 60
Query: 108 VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEK 167
+ +++V R++ GY ++ F + A ++ N TP+ NG+ R+ ++ +
Sbjct: 61 IASIRVCRDQTKRSSLGYAYVNFANAQDASNAMELLNFTPL-NGKP-IRIMFS------Q 112
Query: 168 RDDTPDHT----IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRF 223
RD + + +F+ +L + + L +TF A + + KV +D +G++KGYGFV+F
Sbjct: 113 RDPSIRKSGHGNVFIKNLDTSIDNKALHDTF-AAFGTVLSCKVALDS-SGQSKGYGFVQF 170
Query: 224 GDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNL 283
+E A+ +NG+ + + + +G ++ + Q++ P T V+V NL
Sbjct: 171 DNEEAAQNAIKRLNGMLINDKQVYVGLFIRRQ---------EREQTNGSPKFTNVYVKNL 221
Query: 284 DSIVTDEHLRELFSQYGQL----VHVKIPAGKRC-GFVQFADRSCAEEALRMLNGTQLGG 338
TDE L++LF YG + V + RC GFV F + A A+ LNGT +
Sbjct: 222 SETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNFQNPDSAAAAVERLNGTTINN 281
Query: 339 QNIRLSWGRS 348
+ L GR+
Sbjct: 282 DRV-LYVGRA 290
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 140/284 (49%), Gaps = 16/284 (5%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G V++ KV + +GQ +GYGF++F + A+ ++
Sbjct: 124 NVFIKNLDTSIDNKALHDTFAAFGTVLSCKVALDS-SGQSKGYGFVQFDNEEAAQNAIKR 182
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETFRARYPST 201
NG + N +Q + + E+ + +P T ++V +L+ TD L++ F Y +
Sbjct: 183 LNGM-LINDKQVYVGLFIRRQEREQTNGSPKFTNVYVKNLSETYTDEDLKKLF-GPYGTI 240
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST-RPMRIGPATNKKTVSAS 260
A V+ D + G+++ +GFV F + A+ +NG + R + +G A K A
Sbjct: 241 TSATVMKD-VNGKSRCFGFVNFQNPDSAAAAVERLNGTTINNDRVLYVGRAQRKAEREAE 299
Query: 261 YQNSQVAQSD----DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-----GK 311
+ +++ Q + +++ NLD +DE L++LFS++G + K+ K
Sbjct: 300 LK-AKIEQERISRYEKLQGANLYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGRSK 358
Query: 312 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV F+ A +AL +NG +G + + ++ + ++A
Sbjct: 359 GSGFVSFSTPEEASKALNEMNGKLIGRKPLYVAVAQRKEERKAH 402
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 24/212 (11%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
Q G P + +++ +L + L F G + + V+++ G+ +GF+ F +
Sbjct: 206 QTNGSP-KFTNVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDV-NGKSRCFGFVNFQN 263
Query: 133 RAGAERVLQTFNGTPMPN----------------GEQNFRLNWASFGAGEKRDDTPDHTI 176
A ++ NGT + N E ++ EK +
Sbjct: 264 PDSAAAAVERLNGTTINNDRVLYVGRAQRKAEREAELKAKIEQERISRYEKLQGA---NL 320
Query: 177 FVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM 236
++ +L +D L++ F + + + KV+ID GR+KG GFV F E +A+ EM
Sbjct: 321 YLKNLDDSFSDEKLKDLF-SEFGTITSCKVMIDS-NGRSKGSGFVSFSTPEEASKALNEM 378
Query: 237 NGVFCSTRPMRIGPATNKKTVSASYQNSQVAQ 268
NG +P+ + A K+ A Q +Q AQ
Sbjct: 379 NGKLIGRKPLYVAVAQRKEERKAHLQ-AQFAQ 409
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 275 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI--PAGKRC----GFVQFADRSCAEEAL 328
N +++VG+L+ V +E L +LFSQ Q+ +++ KR +V FA+ A A+
Sbjct: 34 NASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAM 93
Query: 329 RMLNGTQLGGQNIRLSWG-RSPSNKQA 354
+LN T L G+ IR+ + R PS +++
Sbjct: 94 ELLNFTPLNGKPIRIMFSQRDPSIRKS 120
>gi|24649519|ref|NP_732945.1| Rox8, isoform D [Drosophila melanogaster]
gi|442620772|ref|NP_732944.2| Rox8, isoform E [Drosophila melanogaster]
gi|442620774|ref|NP_001262897.1| Rox8, isoform G [Drosophila melanogaster]
gi|442620776|ref|NP_001262898.1| Rox8, isoform H [Drosophila melanogaster]
gi|23172126|gb|AAN13978.1| Rox8, isoform D [Drosophila melanogaster]
gi|211938549|gb|ACJ13171.1| FI04408p [Drosophila melanogaster]
gi|440217818|gb|AAN13977.2| Rox8, isoform E [Drosophila melanogaster]
gi|440217819|gb|AGB96277.1| Rox8, isoform G [Drosophila melanogaster]
gi|440217820|gb|AGB96278.1| Rox8, isoform H [Drosophila melanogaster]
Length = 470
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F+ G V + K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGN---DPYAFIEYSNYQAATTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWA-SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N E+ ++NWA S G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLFL--EKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 255 ------------------KTVSASYQNS-QVAQSDDDPNNTTVFVGNLD-SIVTDEHLRE 294
V S +++ + + P NTTV+ G ++++D+ + +
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 241 HFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGK 293
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 327
D+ T++VGNLDS V+++ L LFS G + KI P F+++++ A A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTA 61
Query: 328 LRMLNGTQLGGQNIRLSWGRSPSNK 352
L +N + I+++W SP N+
Sbjct: 62 LTAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|17944383|gb|AAL48083.1| RE71384p [Drosophila melanogaster]
Length = 470
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F+ G V + K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGN---DPYAFIEYSNYQAATTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWA-SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N E+ ++NWA S G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLFL--EKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 255 ------------------KTVSASYQNS-QVAQSDDDPNNTTVFVGNLD-SIVTDEHLRE 294
V S +++ + + P NTTV+ G ++++D+ + +
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 241 HFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGK 293
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 327
D+ T++VGNLDS V+++ L LFS G + KI P F+++++ A A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTA 61
Query: 328 LRMLNGTQLGGQNIRLSWGRSPSNK 352
L +N + I+++W SP N+
Sbjct: 62 LTAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|413920411|gb|AFW60343.1| putative oligouridylate binding protein [Zea mays]
Length = 425
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 143/284 (50%), Gaps = 30/284 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R++++G++ + +T L F G V K+IR +++ +GFI++ R A +
Sbjct: 119 RSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSS----FGFIDYYDRRYAALAIL 174
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
+ NG + Q ++NWA R+DT H IFVGDL +VTD L F Y +
Sbjct: 175 SLNGRQLYG--QPIKVNWAY--TSTPREDTSGHFNIFVGDLCPEVTDATLFAFFSG-YST 229
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN------- 253
A+V+ D+ TGR++G+GFV F ++ + A+ ++NG + R +R AT
Sbjct: 230 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCNWATKGANAGEE 289
Query: 254 ----KKTVSASYQNSQVAQ---SDDDPNN----TTVFVGNL--DSIVTDEHLRELFSQYG 300
V S +S+ + ++D P N TTV+VGNL ++ + D HL G
Sbjct: 290 KQILDTKVDLSNGSSESGKENPNEDGPENNPQFTTVYVGNLPHEATMNDVHLFFHSLGAG 349
Query: 301 QLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 344
+ V++ K GFV+++ A A++M NG +GG+ I+ S
Sbjct: 350 SIEEVRVTRDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQIKSS 393
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 23/189 (12%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D + +++VG++ VTD +LQE F++ P +G K++ +GF+ + D
Sbjct: 114 DSSTCRSVYVGNIHLQVTDTVLQEVFQSIGP-VEGCKLI----RKEKSSFGFIDYYDRRY 168
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ +NG +P+++ A +D + +FVG+L VT
Sbjct: 169 AALAILSLNGRQLYGQPIKVNWAYTS------------TPREDTSGHFNIFVGDLCPEVT 216
Query: 289 DEHLRELFSQYGQLVHVKIPAGKRCG------FVQFADRSCAEEALRMLNGTQLGGQNIR 342
D L FS Y ++ ++ G FV F ++ A+ A+ LNG LG + IR
Sbjct: 217 DATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIR 276
Query: 343 LSWGRSPSN 351
+W +N
Sbjct: 277 CNWATKGAN 285
>gi|336386826|gb|EGO27972.1| hypothetical protein SERLADRAFT_414166 [Serpula lacrymans var.
lacrymans S7.9]
Length = 933
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 114/234 (48%), Gaps = 44/234 (18%)
Query: 65 AAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLN-TCFAHTGEVVAVKVIR------NK 117
A+ PP TLW GDL+ WMDE Y C + V +KV +
Sbjct: 158 ASTAHTPPVNTNSNALRSTLWWGDLEPWMDEEYAKQVCGLMGWDPVNIKVPSPGPDPASG 217
Query: 118 QTGQIEGYGFIEFISRAGAERVLQTF--NGT----PMPNGEQNFRLNWAS---------- 161
Q GY F+ F S + A+ VL NG+ MPN + F LNWAS
Sbjct: 218 QQANNPGYCFLTFPSPSLAQSVLAQVANNGSGQPVTMPNSSKPFVLNWASSVPNTPMSSS 277
Query: 162 FGAGEKRDDTP------DHTIFVGDLAADVTDYMLQETFRA--------RYP-------S 200
F A + +++IFVGDLA + ++ L FR R P S
Sbjct: 278 FPAANVVMSSAQQQYPREYSIFVGDLAPETSNSDLVAVFRNPVLGLRNDREPKFIRPFLS 337
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
K AK+++D +TG ++GYGFVRF +E++Q RA+ EM+G++C +RPMRI PAT K
Sbjct: 338 CKSAKIMLDPVTGVSRGYGFVRFTEEADQQRALIEMHGLYCLSRPMRISPATAK 391
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 54/77 (70%)
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
DP NTTVFVG L ++++E LR F+ +G + +VK+P GK CGFVQF ++ AE A+ +
Sbjct: 577 DPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKM 636
Query: 332 NGTQLGGQNIRLSWGRS 348
G +GG IRLSWGRS
Sbjct: 637 QGFPIGGSRIRLSWGRS 653
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA G++ VKV K G F++F+ +A AER ++
Sbjct: 582 TVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCG------FVQFVRKADAERAIEK 635
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 636 MQGFPI--GGSRIRLSW 650
>gi|444721742|gb|ELW62457.1| Polyadenylate-binding protein 4-like protein [Tupaia chinensis]
Length = 370
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 140/278 (50%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V+++++ R+ T + GY ++ F+ A A++ L T
Sbjct: 11 SLYVGDLSADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALDT 70
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N M G ++ RL W+ A ++ + +F+ +L + + L E F A +
Sbjct: 71 MN-FDMIKG-KSIRLMWSQRDACLRKSGIGN--VFIKNLDRSIDNKTLYEHFSA-FGKIL 125
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
+KV+ D +KGY FV F ++S RA+ EMNG + +G N+K A +
Sbjct: 126 SSKVMSD--DQGSKGYAFVHFQNQSAADRAIEEMNGKLLKDCKVFVGRFKNRKDREAELR 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
N T V++ N + DE LRE+FS+YG+ + VK+ P+GK GFV
Sbjct: 184 NKA-------SEFTNVYIKNFGDDMDDERLREVFSKYGKTLSVKVMTDPSGKSKGFGFVS 236
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
F + A++A+ +NG + GQ I + + +QA+
Sbjct: 237 FDNHEAAQKAVEEMNGKDINGQLIFVGRAQKKVERQAE 274
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 142/301 (47%), Gaps = 28/301 (9%)
Query: 55 MWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI 114
MW+ + A + +G+ ++I +L +D L F+ G++++ KV+
Sbjct: 84 MWSQRDACLRKSGIG-------------NVFIKNLDRSIDNKTLYEHFSAFGKILSSKVM 130
Query: 115 RNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNF-RLNWASFGAGEKRDDTPD 173
+ Q + GY F+ F +++ A+R ++ NG + + + R E R+ +
Sbjct: 131 SDDQGSK--GYAFVHFQNQSAADRAIEEMNGKLLKDCKVFVGRFKNRKDREAELRNKASE 188
Query: 174 HT-IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
T +++ + D+ D L+E F ++Y T KV+ D +G++KG+GFV F + +A
Sbjct: 189 FTNVYIKNFGDDMDDERLREVF-SKYGKTLSVKVMTDP-SGKSKGFGFVSFDNHEAAQKA 246
Query: 233 MTEMNGVFCSTRPMRIGPATNKKTVSASYQ---NSQVAQSDDDPNNTTVFVGNLDSIVTD 289
+ EMNG + + + +G A K A + Q + +++ NLD + D
Sbjct: 247 VEEMNGKDINGQLIFVGRAQKKVERQAELKQMFEQQKRERIRKCQGVKLYIKNLDDTIDD 306
Query: 290 EHLRELFSQYGQLVHVKIP----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQ--NIRL 343
E LR+ FS +G + VK+ K G + F+ A +A+ +NG LG + NI L
Sbjct: 307 EKLRKEFSSFGSISRVKVMQEEGQSKGFGLICFSSPEEATKAMTEMNGQILGSKPLNIAL 366
Query: 344 S 344
S
Sbjct: 367 S 367
>gi|356576103|ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
max]
Length = 642
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 151/310 (48%), Gaps = 36/310 (11%)
Query: 48 PQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE 107
P AQ A AT AP GVA+ G P +L++GDL+ ++E L F+ +
Sbjct: 8 PMAQSVAAAATPVIAP---GVAL----GGGPFANASLYVGDLEGNVNEEQLYDLFSQVAQ 60
Query: 108 VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEK 167
+ +++V R++ GY ++ F + A ++ N TP+ NG+ R+ ++ +
Sbjct: 61 IASIRVCRDQTKRSSLGYAYVNFANAQDASNAMELLNFTPL-NGKP-IRIMFS------Q 112
Query: 168 RDDTPDHT----IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRF 223
RD + + +F+ +L + + L +TF A + + KV +D +G++KGYGFV+F
Sbjct: 113 RDPSIRKSGHGNVFIKNLDTSIDNKALHDTF-AAFGTVLSCKVALDS-SGQSKGYGFVQF 170
Query: 224 GDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNL 283
+E A+ +NG+ + + + +G ++ + Q++ P T V+V NL
Sbjct: 171 DNEEAAQNAIKRLNGMLINDKQVYVGLFIRRQ---------EREQTNGSPKFTNVYVKNL 221
Query: 284 DSIVTDEHLRELFSQYGQL----VHVKIPAGKRC-GFVQFADRSCAEEALRMLNGTQLGG 338
TDE L++LF YG + V + RC GFV F + A A+ LNGT +
Sbjct: 222 SETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNFQNPDSAAAAVERLNGTTINN 281
Query: 339 QNIRLSWGRS 348
+ L GR+
Sbjct: 282 DRV-LYVGRA 290
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 140/283 (49%), Gaps = 16/283 (5%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L+ FA G V++ KV + +GQ +GYGF++F + A+ ++
Sbjct: 125 VFIKNLDTSIDNKALHDTFAAFGTVLSCKVALDS-SGQSKGYGFVQFDNEEAAQNAIKRL 183
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETFRARYPSTK 202
NG + N +Q + + E+ + +P T ++V +L+ TD L++ F Y +
Sbjct: 184 NGM-LINDKQVYVGLFIRRQEREQTNGSPKFTNVYVKNLSETYTDEDLKKLF-GPYGTIT 241
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST-RPMRIGPATNKKTVSASY 261
A V+ D + G+++ +GFV F + A+ +NG + R + +G A K A
Sbjct: 242 SATVMKD-VNGKSRCFGFVNFQNPDSAAAAVERLNGTTINNDRVLYVGRAQRKAEREAEL 300
Query: 262 QNSQVAQSD----DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-----GKR 312
+ +++ Q + +++ NLD +DE L++LFS++G + K+ K
Sbjct: 301 K-AKIEQERISRYEKLQGANLYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGRSKG 359
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV F+ A +AL +NG +G + + ++ + ++A
Sbjct: 360 SGFVSFSTPEEASKALNEMNGKLIGRKPLYVAVAQRKEERKAH 402
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 24/212 (11%)
Query: 73 QQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFIS 132
Q G P + +++ +L + L F G + + V+++ G+ +GF+ F +
Sbjct: 206 QTNGSP-KFTNVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDV-NGKSRCFGFVNFQN 263
Query: 133 RAGAERVLQTFNGTPMPN----------------GEQNFRLNWASFGAGEKRDDTPDHTI 176
A ++ NGT + N E ++ EK +
Sbjct: 264 PDSAAAAVERLNGTTINNDRVLYVGRAQRKAEREAELKAKIEQERISRYEKLQGA---NL 320
Query: 177 FVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM 236
++ +L +D L++ F + + + KV+ID GR+KG GFV F E +A+ EM
Sbjct: 321 YLKNLDDSFSDEKLKDLF-SEFGTITSCKVMIDS-NGRSKGSGFVSFSTPEEASKALNEM 378
Query: 237 NGVFCSTRPMRIGPATNKKTVSASYQNSQVAQ 268
NG +P+ + A K+ A Q +Q AQ
Sbjct: 379 NGKLIGRKPLYVAVAQRKEERKAHLQ-AQFAQ 409
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 275 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI--PAGKRC----GFVQFADRSCAEEAL 328
N +++VG+L+ V +E L +LFSQ Q+ +++ KR +V FA+ A A+
Sbjct: 34 NASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAM 93
Query: 329 RMLNGTQLGGQNIRLSWG-RSPSNKQA 354
+LN T L G+ IR+ + R PS +++
Sbjct: 94 ELLNFTPLNGKPIRIMFSQRDPSIRKS 120
>gi|70995622|ref|XP_752566.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus Af293]
gi|66850201|gb|EAL90528.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus Af293]
gi|159131321|gb|EDP56434.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus A1163]
Length = 489
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 131/292 (44%), Gaps = 30/292 (10%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V +VK+I +K + + G + +
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNDTITALLNLMTLVRLRG---LCK 147
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
+ R+NWA ++DT H IFVGDL+ +V D +L + F A + S
Sbjct: 148 PSTAVESISRYAEIRVNWAYQSNSANKEDTSSHFHIFVGDLSNEVNDEILLQAFSA-FGS 206
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D TGR++GYGFV F + ++ +A+ M+G + +R +R A K S S
Sbjct: 207 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQKGQPSIS 266
Query: 261 YQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLREL 295
Q + A QS D P TT +VGNL T L L
Sbjct: 267 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVPL 326
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
F +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 327 FHNFGYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 378
>gi|414588971|tpg|DAA39542.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 648
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 143/278 (51%), Gaps = 20/278 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + + L F+ G VV+V+V R+ + + GY ++ + ++ A R L+
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ NG+ R+ +++ ++ T + IF+ +L + + L +TF A + +
Sbjct: 96 LNFTPI-NGKP-IRIMYSNRDPSSRKSGTGN--IFIKNLDKSIDNKALYDTFCA-FGNIL 150
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
K+ D +G ++GYGFV+F + A+ ++NG+ + + + +GP K+
Sbjct: 151 SCKIATDP-SGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRKQDRENVSS 209
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL---VHVKIPAGK-RC-GFVQ 317
N + + V+V NL VTD+ L+E+F +YG + V ++ GK RC GFV
Sbjct: 210 NIKF---------SNVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVN 260
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
F + A +A++ LNG + + + + S ++ +
Sbjct: 261 FENADAAAQAVQELNGKIFNDKELYVGRAQKKSEREME 298
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 136/285 (47%), Gaps = 19/285 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L F G +++ K+ + +G+ GYGF++F A+ +
Sbjct: 124 NIFIKNLDKSIDNKALYDTFCAFGNILSCKIATDP-SGESRGYGFVQFEKDESAQSAIDK 182
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH----TIFVGDLAADVTDYMLQETFRARY 198
NG + N ++ F F + R++ + ++V +L+ VTD L+E F +Y
Sbjct: 183 LNGM-LINDKKVF---VGPFVRKQDRENVSSNIKFSNVYVKNLSDTVTDDELKEMF-GKY 237
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
+ A V+ D G+++ +GFV F + +A+ E+NG + + + +G A K
Sbjct: 238 GTITSAVVMRDS-DGKSRCFGFVNFENADAAAQAVQELNGKIFNDKELYVGRAQKKSERE 296
Query: 259 ASYQNS---QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AG 310
+ V + + NT +++ NL+ + DE LRELF++YG + K+
Sbjct: 297 MELKEKFEKNVQEVAEKFQNTNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVS 356
Query: 311 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ GFV F A AL +NG +G + + ++ + +++A+
Sbjct: 357 RGSGFVAFKSAEDANRALTEMNGKMVGSKPLYVALAQRKEDRKAK 401
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L + + L F G + + V+R+ G+ +GF+ F + A +
Sbjct: 212 KFSNVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSD-GKSRCFGFVNFENADAAAQA 270
Query: 140 LQTFNGTPMPNGE-----------------QNFRLNWASFGAGEKRDDTPDHTIFVGDLA 182
+Q NG + E + F N EK +T +++ +L
Sbjct: 271 VQELNGKIFNDKELYVGRAQKKSEREMELKEKFEKNVQE--VAEKFQNT---NLYLKNLE 325
Query: 183 ADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCS 242
++ D L+E F A Y + KV+ D G ++G GFV F + RA+TEMNG
Sbjct: 326 ENIDDEKLRELF-AEYGNITSCKVMRDS-NGVSRGSGFVAFKSAEDANRALTEMNGKMVG 383
Query: 243 TRPMRIGPATNKKTVSASYQ 262
++P+ + A K+ A Q
Sbjct: 384 SKPLYVALAQRKEDRKAKLQ 403
>gi|353238970|emb|CCA70899.1| related to polyadenylate-binding protein [Piriformospora indica DSM
11827]
Length = 944
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 110/224 (49%), Gaps = 40/224 (17%)
Query: 82 RTLWIGDLQYWMDETY-LNTCFAHTGEVVAVKVIR------NKQTGQIEGYGFIEFISRA 134
+TLW+GDL+ WMD+ Y L C E A+ + R + GY + F +
Sbjct: 58 KTLWLGDLEPWMDDHYMLQVCSLFGWETSAIYMPRPPAAPNATRHPNNAGYCLLIFPTHE 117
Query: 135 GAERVLQTF------NGTP----MPNGEQNFRLNWASFGAGEKR--------DDTPDHTI 176
A V++ + N T +PN + +L+W S + D+ +++I
Sbjct: 118 KAATVVEQYGLDAMNNSTAQPILLPNSNRPIKLDWLSSTNAKVSIGKDPGPIDNAIEYSI 177
Query: 177 FVGDLAADVTDYMLQETFR---------------ARYPSTKGAKVVIDRLTGRTKGYGFV 221
FVGD+AADVT+ L FR A + S AKV++D +TG +KGYGFV
Sbjct: 178 FVGDIAADVTNADLMNVFRNPNLGLRGDFPPRLIAPFLSCCNAKVMVDSVTGISKGYGFV 237
Query: 222 RFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQ 265
RF E++Q RA+ EM G++C +RPMR+ AT K + + Q
Sbjct: 238 RFTSEADQKRALLEMQGLYCKSRPMRLSTATAKNKAGGADEEHQ 281
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 54/79 (68%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRM 330
DP NTTVFVG L ++++E LR F+ +G + +VK+P GK CGFVQF +S AE A+
Sbjct: 397 SDPQNTTVFVGGLSPLISEETLRTFFAPFGAIHYVKVPPGKSCGFVQFVKKSDAERAIEA 456
Query: 331 LNGTQLGGQNIRLSWGRSP 349
L+G + G +RLSWGR P
Sbjct: 457 LSGFSIAGSKVRLSWGRIP 475
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA G + VKV K G F++F+ ++ AER ++
Sbjct: 403 TVFVGGLSPLISEETLRTFFAPFGAIHYVKVPPGKSCG------FVQFVKKSDAERAIEA 456
Query: 143 FNGTPMPNGEQNFRLNW 159
+G + + RL+W
Sbjct: 457 LSGFSIAGSK--VRLSW 471
>gi|414588970|tpg|DAA39541.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 654
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 143/278 (51%), Gaps = 20/278 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + + L F+ G VV+V+V R+ + + GY ++ + ++ A R L+
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ NG+ R+ +++ ++ T + IF+ +L + + L +TF A + +
Sbjct: 96 LNFTPI-NGKP-IRIMYSNRDPSSRKSGTGN--IFIKNLDKSIDNKALYDTFCA-FGNIL 150
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
K+ D +G ++GYGFV+F + A+ ++NG+ + + + +GP K+
Sbjct: 151 SCKIATDP-SGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRKQDRENVSS 209
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL---VHVKIPAGK-RC-GFVQ 317
N + + V+V NL VTD+ L+E+F +YG + V ++ GK RC GFV
Sbjct: 210 NIKF---------SNVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVN 260
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
F + A +A++ LNG + + + + S ++ +
Sbjct: 261 FENADAAAQAVQELNGKIFNDKELYVGRAQKKSEREME 298
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 136/285 (47%), Gaps = 19/285 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L F G +++ K+ + +G+ GYGF++F A+ +
Sbjct: 124 NIFIKNLDKSIDNKALYDTFCAFGNILSCKIATDP-SGESRGYGFVQFEKDESAQSAIDK 182
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT----IFVGDLAADVTDYMLQETFRARY 198
NG + N ++ F F + R++ + ++V +L+ VTD L+E F +Y
Sbjct: 183 LNGM-LINDKKVF---VGPFVRKQDRENVSSNIKFSNVYVKNLSDTVTDDELKEMF-GKY 237
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
+ A V+ D G+++ +GFV F + +A+ E+NG + + + +G A K
Sbjct: 238 GTITSAVVMRDS-DGKSRCFGFVNFENADAAAQAVQELNGKIFNDKELYVGRAQKKSERE 296
Query: 259 ASYQNS---QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AG 310
+ V + + NT +++ NL+ + DE LRELF++YG + K+
Sbjct: 297 MELKEKFEKNVQEVAEKFQNTNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVS 356
Query: 311 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ GFV F A AL +NG +G + + ++ + +++A+
Sbjct: 357 RGSGFVAFKSAEDANRALTEMNGKMVGSKPLYVALAQRKEDRKAK 401
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L + + L F G + + V+R+ G+ +GF+ F + A +
Sbjct: 212 KFSNVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSD-GKSRCFGFVNFENADAAAQA 270
Query: 140 LQTFNGTPMPNGE-----------------QNFRLNWASFGAGEKRDDTPDHTIFVGDLA 182
+Q NG + E + F N EK +T +++ +L
Sbjct: 271 VQELNGKIFNDKELYVGRAQKKSEREMELKEKFEKNVQE--VAEKFQNT---NLYLKNLE 325
Query: 183 ADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCS 242
++ D L+E F A Y + KV+ D G ++G GFV F + RA+TEMNG
Sbjct: 326 ENIDDEKLRELF-AEYGNITSCKVMRDS-NGVSRGSGFVAFKSAEDANRALTEMNGKMVG 383
Query: 243 TRPMRIGPATNKKTVSASYQ 262
++P+ + A K+ A Q
Sbjct: 384 SKPLYVALAQRKEDRKAKLQ 403
>gi|405975383|gb|EKC39949.1| tRNA selenocysteine 1-associated protein 1 [Crassostrea gigas]
Length = 337
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 134/248 (54%), Gaps = 37/248 (14%)
Query: 124 GYGFIEFISRAGAERVLQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDL 181
GY FI+F A + + NG +PN + F+LN AS+G ++ TP++++FVGDL
Sbjct: 16 GYCFIDFHDPENAHQAMLKLNGKNIPNSSPTRRFKLNSASYG--KEHLSTPEYSLFVGDL 73
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE---MNG 238
+V DY L + F R+ S + AKVV++ +G++KGYGFVRF +E++Q RA+ E M G
Sbjct: 74 TEEVDDYTLYQAFSRRFKSCRSAKVVLEP-SGKSKGYGFVRFTEETDQQRALIEMQHMQG 132
Query: 239 VFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS- 297
V +P+R+ AT K S Y ++FVG+L V D L + FS
Sbjct: 133 V--GKKPIRVSLATPK---SPEY---------------SLFVGDLTEEVDDYTLYQAFSR 172
Query: 298 QYGQLVHVKI---PAGKR--CGFVQFADRSCAEEALRMLNGTQ-LGGQNIRLSWGRSPSN 351
++ K+ P+GK GFV+F + + + AL + Q +G + IR+S +P
Sbjct: 173 RFKSCRSAKVVLEPSGKSKGYGFVRFTEETDQQRALIEMQHMQGVGKKPIRVSLA-TPKR 231
Query: 352 KQAQPDPN 359
AQ DPN
Sbjct: 232 PMAQ-DPN 238
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 100/179 (55%), Gaps = 20/179 (11%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL-- 140
+L++GDL +D+ L F+ + + + +G+ +GYGF+ F +R L
Sbjct: 67 SLFVGDLTEEVDDYTLYQAFSRRFKSCRSAKVVLEPSGKSKGYGFVRFTEETDQQRALIE 126
Query: 141 -QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
Q G G++ R++ A+ +P++++FVGDL +V DY L + F R+
Sbjct: 127 MQHMQGV----GKKPIRVSLAT-------PKSPEYSLFVGDLTEEVDDYTLYQAFSRRFK 175
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE---MNGVFCSTRPMRIGPATNKK 255
S + AKVV++ +G++KGYGFVRF +E++Q RA+ E M GV +P+R+ AT K+
Sbjct: 176 SCRSAKVVLEP-SGKSKGYGFVRFTEETDQQRALIEMQHMQGV--GKKPIRVSLATPKR 231
>gi|260940363|ref|XP_002614481.1| hypothetical protein CLUG_05259 [Clavispora lusitaniae ATCC 42720]
gi|238851667|gb|EEQ41131.1| hypothetical protein CLUG_05259 [Clavispora lusitaniae ATCC 42720]
Length = 651
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 135/268 (50%), Gaps = 47/268 (17%)
Query: 17 AAHQYQYQQQAPPQQQPPPQPSPYMMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQG 76
A+HQ+Q +Q+ +P P + + AT+ A ++ G
Sbjct: 26 ASHQHQQEQELLSS-----------FTVPEPPISTKESSSATETAEHESQGTP------- 67
Query: 77 QPGEIRTLWIGDLQYWMDET-YLNTCFAHTGEVVAVKVIRNK----QTG----QIEGYGF 127
P + RTLW+GDL W+DE+ ++ + V+VK+I+ K ++G GY F
Sbjct: 68 HPEKPRTLWMGDLDPWLDESAIVDLWWQILRSKVSVKLIKPKFIKPESGFTGLSHSGYCF 127
Query: 128 IEFISRAGAERVLQTFNGTPMP---------------NGEQNFRLNWASFGAGEKRD--D 170
+EF S A+ L NG +P N ++ FRLNWAS GA
Sbjct: 128 VEFQSYEEAQSAL-ALNGQLLPDIAMPSQKHFPNNPDNQKKYFRLNWAS-GATLTAPLIH 185
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
TP++++FVGDL A T+ L F+ +P S + +V+ D ++G+++ +GFVRF +ESE+
Sbjct: 186 TPEYSLFVGDLTASTTEAHLLSFFQKSFPNSIRTVRVMTDPVSGKSRCFGFVRFTEESER 245
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKKTV 257
RA+ EMNG + RP+R+ AT + T
Sbjct: 246 QRALREMNGAWFGGRPLRVALATPRNTA 273
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 56/82 (68%)
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
DP+NTTVFVG L S V+++ L LF +G + +KIP GK CGF++++ R AEEA++ +
Sbjct: 347 DPSNTTVFVGGLRSEVSEQTLFTLFKPFGTIQQIKIPPGKNCGFLKYSTREEAEEAIQAM 406
Query: 332 NGTQLGGQNIRLSWGRSPSNKQ 353
G +GG +RL WGR +N +
Sbjct: 407 EGFIIGGNRVRLGWGRVSANNK 428
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 18/119 (15%)
Query: 277 TVFVGNLDSIVTDEHLRELFSQY--GQLVHVKI----PAGK-RC-GFVQFADRSCAEEAL 328
++FVG+L + T+ HL F + + V++ +GK RC GFV+F + S + AL
Sbjct: 190 SLFVGDLTASTTEAHLLSFFQKSFPNSIRTVRVMTDPVSGKSRCFGFVRFTEESERQRAL 249
Query: 329 RMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSM 387
R +NG GG+ +R++ + + P+Q N Y+ G + A PQ P+M
Sbjct: 250 REMNGAWFGGRPLRVALATPRNTALLRKSPDQKNM----YS------GLSPAVPQSPAM 298
>gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 649
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 139/280 (49%), Gaps = 20/280 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ +L++GDL + ++ L F G+VV+V+V R+ + + GYG++ + + A R L
Sbjct: 26 VTSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARAL 85
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
+ N TP+ + R+ +++ +R + + IF+ +L + L +TF A + +
Sbjct: 86 EVLNFTPLHG--KPIRIMYSNRDPTIRR--SGNGNIFIKNLDKAIDHKALHDTFSA-FGN 140
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
KV +D +G++KGYGFV++ E +A+ ++NG+ + + + +GP K +
Sbjct: 141 ILSCKVAVDS-SGQSKGYGFVQYDSEEAAQKAIEKLNGMLLNDKQVYVGPFVRKHERDMA 199
Query: 261 YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI----PAGKRC-GF 315
D T VFV NL +E LR++F ++G + V + RC GF
Sbjct: 200 V---------DKTRFTNVFVKNLSESTLEEELRKIFGEFGAITSVAVMKDEDGKSRCFGF 250
Query: 316 VQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
V F + A A+ LNG +L ++ + + S ++ +
Sbjct: 251 VNFENAEDAARAVEALNGYKLDNKDWFVGRAQKKSEREME 290
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 159/334 (47%), Gaps = 29/334 (8%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ F+ G +++ KV + +GQ +GYGF+++ S A++ ++
Sbjct: 116 NIFIKNLDKAIDHKALHDTFSAFGNILSCKVAVDS-SGQSKGYGFVQYDSEEAAQKAIEK 174
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFR---ARYP 199
NG + N +Q + F +RD D T F ++++ L+E R +
Sbjct: 175 LNGMLL-NDKQVY---VGPFVRKHERDMAVDKTRFTNVFVKNLSESTLEEELRKIFGEFG 230
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--KTV 257
+ V+ D G+++ +GFV F + + RA+ +NG + +G A K + +
Sbjct: 231 AITSVAVMKDE-DGKSRCFGFVNFENAEDAARAVEALNGYKLDNKDWFVGRAQKKSEREM 289
Query: 258 SASYQNSQVA-QSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAG--K 311
++ Q A ++ D +++ NLD ++DE L+ELFS YG + K+ P+G K
Sbjct: 290 ELKHRFEQSAKEAVDKSQGLNLYIKNLDDSISDEKLKELFSPYGTITSCKVMRDPSGVSK 349
Query: 312 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQG 371
GFV F++ A AL +NG + + + ++ + ++A+ ++Q
Sbjct: 350 GSGFVAFSNPEEASRALSEMNGKMVVSKPLYVALAQRKEERRARLQAQ--------FSQM 401
Query: 372 YENYGYAAAAPQDPSMYYGGYPGYGN---YQQPQ 402
++ AP+ P MY G PG G Y QPQ
Sbjct: 402 RPIAMASSVAPRMP-MYPPGGPGLGQQIFYGQPQ 434
>gi|119223939|gb|AAI26843.1| TIAL1 protein [Bos taurus]
Length = 279
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 118/230 (51%), Gaps = 10/230 (4%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 18 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 75
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 76 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 134
Query: 245 PMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFS 297
+R AT K S Q + Q + P N TV+ G + S +TD+ +R+ FS
Sbjct: 135 QIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFS 194
Query: 298 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
+GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 195 PFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 244
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+ F
Sbjct: 54 PSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSF 113
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDDTP 172
++ AE + G + G + R NWA+ F +
Sbjct: 114 YNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPK 171
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ T++ G +A+ +TD ++++TF S G +++ KGY FVRF A
Sbjct: 172 NCTVYCGGIASGLTDQLMRQTF-----SPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHA 224
Query: 233 MTEMNG 238
+ +NG
Sbjct: 225 IVSVNG 230
>gi|156542291|ref|XP_001604737.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Nasonia
vitripennis]
Length = 294
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 102/176 (57%), Gaps = 13/176 (7%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
LW+G L+ +M E+++ F GE VKV+RN+ TG+ GY F+ F + A +
Sbjct: 10 LWMGGLEPYMTESFVMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 143 FNGTPMP--NGEQNFRLNWASFG---AGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG +P N + FRLN AS A E+ +++I+VGDL+ DV DY L TF A+
Sbjct: 70 LNGKIIPGSNPQVRFRLNHASTTGKPAAER-----EYSIWVGDLSTDVDDYSLYRTFAAK 124
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPAT 252
Y S + AKV++D +G +KGYGFVRF +E EQ ++ MNG TR ++I A
Sbjct: 125 YNSIRTAKVILDS-SGFSKGYGFVRFANEDEQKDSLVTMNGYRGLGTRSLKICNAV 179
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 107/262 (40%), Gaps = 55/262 (20%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L +T+ + F + KV+ +R TG GY FV F + L AM +
Sbjct: 10 LWMGGLEPYMTESFVMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 236 MNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 295
+NG +I P +N + V ++ +++VG+L + V D L
Sbjct: 70 LNG--------KIIPGSNPQ-VRFRLNHASTTGKPAAEREYSIWVGDLSTDVDDYSLYRT 120
Query: 296 FS-QYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNGTQ-LGGQNIRLSWGRS 348
F+ +Y + K+ K GFV+FA+ +++L +NG + LG +++++
Sbjct: 121 FAAKYNSIRTAKVILDSSGFSKGYGFVRFANEDEQKDSLVTMNGYRGLGTRSLKIC---- 176
Query: 349 PSNKQAQPDPNQWN--------AGYYGYAQGY--ENYGYAAAAPQDPSMYYGGYP----- 393
A P P WN YA G E+Y Y D S Y+ Y
Sbjct: 177 ----NAVPRP--WNKVSDSNSAPSSSDYASGMSSESYNY-----YDTSSYWNSYSAWQQG 225
Query: 394 ---------GYGNYQQPQQPQQ 406
GY NY ++P++
Sbjct: 226 YYESEPTSDGYSNYTSDRKPEE 247
>gi|146421272|ref|XP_001486586.1| hypothetical protein PGUG_02257 [Meyerozyma guilliermondii ATCC
6260]
Length = 681
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 108/198 (54%), Gaps = 29/198 (14%)
Query: 82 RTLWIGDLQYWMDETYL-NTCFAHTGEVVAVKVIRNKQT--------GQIEGYGFIEFIS 132
RTLW+GDL W+DE + + + G+ V +K+I+ K GY F+EF S
Sbjct: 53 RTLWMGDLDPWLDEAAIADLWYQLLGKKVTIKIIKPKNVRGSMSSSGLSHSGYCFVEFES 112
Query: 133 RAGAERVLQTFNGTPMP---------------NGEQNFRLNWASFGAGEKRDDT--PDHT 175
A++ L + NG +P N ++ FRLNWAS GA P+++
Sbjct: 113 YEDAQQAL-SLNGQLLPDIAMPSQQLFPNNPDNQKKYFRLNWAS-GATLTAPIVQGPEYS 170
Query: 176 IFVGDLAADVTDYMLQETFRARYP-STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+FVGDL+A T+ L F+ +P S K +V+ D +TG+ + +GFVRF DESE+ RA+
Sbjct: 171 LFVGDLSASTTEAHLLAFFQKSFPNSIKTVRVMTDPVTGKLRCFGFVRFTDESERQRALV 230
Query: 235 EMNGVFCSTRPMRIGPAT 252
EMNG + RP+R+ AT
Sbjct: 231 EMNGAWFGGRPLRVALAT 248
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
DPNNTTVFVG L S V ++ L LF Q+G + +KIP GK CGFV++ +R AEEA+ +
Sbjct: 324 DPNNTTVFVGGLSSDVNEQTLFTLFKQFGIIQQIKIPPGKNCGFVKYTNREDAEEAIASM 383
Query: 332 NGTQLGGQNIRLSWGRS-PSNKQ 353
G +GG +RLSWGR SNK+
Sbjct: 384 QGFIIGGNRVRLSWGRVLASNKK 406
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 19/129 (14%)
Query: 277 TVFVGNLDSIVTDEHLRELFSQY--GQLVHVKI----PAGK-RC-GFVQFADRSCAEEAL 328
++FVG+L + T+ HL F + + V++ GK RC GFV+F D S + AL
Sbjct: 170 SLFVGDLSASTTEAHLLAFFQKSFPNSIKTVRVMTDPVTGKLRCFGFVRFTDESERQRAL 229
Query: 329 RMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMY 388
+NG GG+ +R++ S+ + N + ++G Y YGYA A
Sbjct: 230 VEMNGAWFGGRPLRVALATPRSSGKRFGFQNMYP--FWGGGAPYYPYGYAGAP------- 280
Query: 389 YGGYPGYGN 397
G P YGN
Sbjct: 281 --GLPDYGN 287
>gi|2281006|dbj|BAA21559.1| T-cluster binding protein [Homo sapiens]
gi|119569770|gb|EAW49385.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Homo sapiens]
Length = 265
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 118/230 (51%), Gaps = 10/230 (4%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 68
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 69 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 127
Query: 245 PMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFS 297
+R AT K S Q + Q + P N TV+ G + S +TD+ +R+ FS
Sbjct: 128 QIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFS 187
Query: 298 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
+GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 188 PFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 237
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+ F
Sbjct: 47 PSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSF 106
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDDTP 172
++ AE + G + G + R NWA+ F +
Sbjct: 107 YNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPK 164
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ T++ G +A+ +TD ++++TF S G +++ KGY FVRF A
Sbjct: 165 NCTVYCGGIASGLTDQLMRQTF-----SPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHA 217
Query: 233 MTEMNG 238
+ +NG
Sbjct: 218 IVSVNG 223
>gi|195504962|ref|XP_002099304.1| GE10834 [Drosophila yakuba]
gi|194185405|gb|EDW99016.1| GE10834 [Drosophila yakuba]
Length = 464
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 135/293 (46%), Gaps = 33/293 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F G V + K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGN---DPYAFIEYSNYQAATTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWA-SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N + E ++NWA S G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLFLDKE--IKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 255 ------------------KTVSASYQNS-QVAQSDDDPNNTTVFVGNLD-SIVTDEHLRE 294
V S +++ + + P NTTV+ G ++++D+ + +
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 241 HFVQFGPIHDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGK 293
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 327
D+ T++VGNLDS V+++ L LF G + KI P F+++++ A A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTA 61
Query: 328 LRMLNGTQLGGQNIRLSWGRSPSNK 352
L +N + I+++W SP N+
Sbjct: 62 LTAMNKRLFLDKEIKVNWATSPGNQ 86
>gi|19526272|gb|AAL89666.1|AF411956_7 polyA-binding protein [Takifugu rubripes]
Length = 623
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 140/283 (49%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVVKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + RA+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR-- 312
A A++ + T V++ N + DE L+ELF +YG+ + VK+ P GK
Sbjct: 180 EAELG----AKAKE---FTNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPTGKSRG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV + A +A+ +NGT+L G+ + + + + +QA+
Sbjct: 233 FGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKNERQAE 275
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 135/285 (47%), Gaps = 21/285 (7%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A+R ++
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 158
Query: 144 NGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG + + + ++ + A GA K +++ + D+ D L+E F +
Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGDDMDDERLKELF-DK 213
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
Y T KV++D TG+++G+GFV + + +A+ +MNG + + + +G A K
Sbjct: 214 YGKTLSVKVMMDP-TGKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKNER 272
Query: 258 SASYQNSQVAQSDDDPNN---TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA----G 310
A + + + +++ NLD + DE LR+ FS +G + K+
Sbjct: 273 QAELKRKFEMLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEEGRS 332
Query: 311 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL D+T+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A+ A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 33/221 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F G+ ++VKV+ + TG+ G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDP-TGKSRGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NGT + NG+ F G +K+++ +++ +
Sbjct: 248 VEDMNGTEL-NGKTVF------VGRAQKKNERQAELKRKFEMLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN---SQVAQSDDDPNNTTV 278
++P+ + A K+ A N ++A P NT +
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRAMPANTII 398
>gi|125775095|ref|XP_001358799.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|195144954|ref|XP_002013461.1| GL24152 [Drosophila persimilis]
gi|54638540|gb|EAL27942.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|194102404|gb|EDW24447.1| GL24152 [Drosophila persimilis]
Length = 464
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 133/293 (45%), Gaps = 33/293 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F G V K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDSSVSEELLIALFGTMGAVKNCKIIREPGN---DPYAFIEYSNYQAASTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N E+ ++NWA+ G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLFL--EKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K
Sbjct: 121 ISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 255 --------------KTVSASYQNSQVAQSDD-----DPNNTTVFVGNLD-SIVTDEHLRE 294
+++Q D+ P NTTV+ G ++++D+ + +
Sbjct: 181 SSKGGGLGGGMGGGPGNGGGVKSNQRHTFDEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
F Q+G + V++ K F++F + A A+ + T++ G ++ WG+
Sbjct: 241 HFGQFGPIQDVRVFKDKGFAFIKFVTKDSAAHAIEHTHNTEVHGNLVKCFWGK 293
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 106/242 (43%), Gaps = 31/242 (12%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D++ T++VG+L + V++ +L F + K K++ R G Y F+ + +
Sbjct: 2 DESQPKTLYVGNLDSSVSEELLIALF-GTMGAVKNCKII--REPGNDP-YAFIEYSNYQA 57
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+T MN + +++ AT+ + D ++ +FVG+L +
Sbjct: 58 ASTALTAMNKRLFLEKEIKVNWATSPGNQPKT----------DISSHHHIFVGDLSPEIE 107
Query: 289 DEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
E LRE F+ +G++ + +I K FV F ++ AE A++ +NG +G ++IR
Sbjct: 108 TETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIR 167
Query: 343 LSWG-------RSPSNKQAQPDPNQWNAGYYGYAQGYENYG----YAAAAPQDPSMYYGG 391
+W R S G G + + + Y ++P + ++Y GG
Sbjct: 168 TNWSTRKLPPPRESSKGGGLGGGMGGGPGNGGGVKSNQRHTFDEVYNQSSPTNTTVYCGG 227
Query: 392 YP 393
+P
Sbjct: 228 FP 229
>gi|194910009|ref|XP_001982056.1| GG12380 [Drosophila erecta]
gi|190656694|gb|EDV53926.1| GG12380 [Drosophila erecta]
Length = 464
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 135/293 (46%), Gaps = 33/293 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F G V + K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGN---DPYAFIEYSNYQAATTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWA-SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N + E ++NWA S G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLFLDKE--IKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 255 ------------------KTVSASYQNS-QVAQSDDDPNNTTVFVGNLD-SIVTDEHLRE 294
V S +++ + + P NTTV+ G ++++D+ + +
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 241 HFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGK 293
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 31/242 (12%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D++ T++VG+L + V++ +L F P K K++ R G Y F+ + +
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFGTMGP-VKSCKII--REPGNDP-YAFIEYSNYQA 57
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+T MN + +++ AT+ + D ++ +FVG+L +
Sbjct: 58 ATTALTAMNKRLFLDKEIKVNWATSPGNQPKT----------DISSHHHIFVGDLSPEIE 107
Query: 289 DEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
E LRE F+ +G++ + +I K FV F ++ AE A++ +NG +G ++IR
Sbjct: 108 TETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIR 167
Query: 343 LSWG-------RSPSNKQAQPDPNQWNAGYYGYAQGYENYG----YAAAAPQDPSMYYGG 391
+W R PS Q G +G + + Y ++P + ++Y GG
Sbjct: 168 TNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGG 227
Query: 392 YP 393
+P
Sbjct: 228 FP 229
>gi|119569771|gb|EAW49386.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_b [Homo sapiens]
Length = 282
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 118/230 (51%), Gaps = 10/230 (4%)
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ +
Sbjct: 28 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPE 85
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+T ++ F A + A+VV D TG++KGYGFV F ++ + A+ M G + R
Sbjct: 86 ITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 144
Query: 245 PMRIGPATNKKTVSASYQNSQVAQ-------SDDDPNNTTVFVGNLDSIVTDEHLRELFS 297
+R AT K S Q + Q + P N TV+ G + S +TD+ +R+ FS
Sbjct: 145 QIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFS 204
Query: 298 QYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
+GQ++ +++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 205 PFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 254
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q+ +++GDL + + + FA G++ +V+++ TG+ +GYGF+ F
Sbjct: 64 PSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSF 123
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWAS------------------FGAGEKRDDTP 172
++ AE + G + G + R NWA+ F +
Sbjct: 124 YNKLDAENAIVHMGGQWL--GGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPK 181
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ T++ G +A+ +TD ++++TF S G +++ KGY FVRF A
Sbjct: 182 NCTVYCGGIASGLTDQLMRQTF-----SPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHA 234
Query: 233 MTEMNG 238
+ +NG
Sbjct: 235 IVSVNG 240
>gi|50311447|ref|XP_455748.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644884|emb|CAG98456.1| KLLA0F14861p [Kluyveromyces lactis]
Length = 589
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 100/179 (55%), Gaps = 12/179 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIE-----GYGFIEFISRAGAE 137
L++GDL E + + ++ GE V VK+I++ + GY F+EF ++ A
Sbjct: 58 LYMGDLNPDWTENDIKSIWSMLGEPNVQVKLIKSSNPNKSHAVNNSGYCFVEFPNQMAAS 117
Query: 138 RVLQTFNGTPMP-NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
L +G +P + +LNWASF + T+FVGDLA +VT+ L E F +
Sbjct: 118 NALMK-SGLRVPMDSNYALKLNWASFATAPGSE----FTLFVGDLAPNVTEAQLFELFIS 172
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255
RY ST AK+V D+ TG +KGYGFV+F +E EQ RA+ EM G F + R +R+G + K
Sbjct: 173 RYSSTLNAKIVFDQFTGVSKGYGFVKFVNEMEQQRALVEMQGTFLNGRAIRVGTTSKNK 231
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 56/77 (72%)
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
DPNNTTVF+G L +++T++ LR F +GQ+V+VKIP GK CGFVQ+ DR AE A+ +
Sbjct: 312 DPNNTTVFIGGLSTLITEDELRSYFQPFGQIVYVKIPVGKGCGFVQYVDRISAETAISKM 371
Query: 332 NGTQLGGQNIRLSWGRS 348
G +G IRLSWGRS
Sbjct: 372 QGFPIGNSRIRLSWGRS 388
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 277 TVFVGNLDSIVTDEHLRELF-SQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALR 329
T+FVG+L VT+ L ELF S+Y ++ KI K GFV+F + + AL
Sbjct: 151 TLFVGDLAPNVTEAQLFELFISRYSSTLNAKIVFDQFTGVSKGYGFVKFVNEMEQQRALV 210
Query: 330 MLNGTQLGGQNIRLSWGRSPSNK 352
+ GT L G+ IR+ G + NK
Sbjct: 211 EMQGTFLNGRAIRV--GTTSKNK 231
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T++IG L + E L + F G++V VK+ K G GF++++ R AE +
Sbjct: 317 TVFIGGLSTLITEDELRSYFQPFGQIVYVKIPVGK------GCGFVQYVDRISAETAISK 370
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 371 MQGFPI--GNSRIRLSW 385
>gi|449438385|ref|XP_004136969.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449495630|ref|XP_004159899.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 649
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 141/278 (50%), Gaps = 20/278 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + ++ L F G+VV+V+V R+ + + GYG++ + + A R L
Sbjct: 30 SLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPVDASRALDV 89
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ NG R+ ++ ++ + + IF+ +L + L +TF A + S
Sbjct: 90 LNFTPL-NGNP-IRVMYSHRDPSVRKSGSGN--IFIKNLDKAIDHKALHDTFSA-FGSIL 144
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KV D +G++KG+GFV+F E L+A+ ++NG+ + + + +GP K+ + +
Sbjct: 145 SCKVATDS-SGQSKGFGFVQFDTEEAALKAIEKLNGMLLNDKQVFVGPFLRKQERESVSE 203
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI----PAGKRC-GFVQ 317
++ NN VFV NL ++E L+ +F ++G + V + +C GFV
Sbjct: 204 KTKF-------NN--VFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGEGKSKCFGFVN 254
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
F + A ++ LNG ++ G+ + + S ++ +
Sbjct: 255 FENADDAARSVEALNGKKVDGKEWYVGKAQKKSEREVE 292
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 138/285 (48%), Gaps = 19/285 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ F+ G +++ KV + +GQ +G+GF++F + A + ++
Sbjct: 118 NIFIKNLDKAIDHKALHDTFSAFGSILSCKVATDS-SGQSKGFGFVQFDTEEAALKAIEK 176
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT----IFVGDLAADVTDYMLQETFRARY 198
NG + N +Q F F ++R+ + T +FV +LA ++ L+ F
Sbjct: 177 LNGMLL-NDKQVF---VGPFLRKQERESVSEKTKFNNVFVKNLAETTSEEDLKNMFGEFG 232
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
P T + VV+ G++K +GFV F + + R++ +NG + +G A K
Sbjct: 233 PIT--SVVVMRDGEGKSKCFGFVNFENADDAARSVEALNGKKVDGKEWYVGKAQKKSERE 290
Query: 259 ASYQNS---QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAG-- 310
++ V ++ D ++V NLD + D+ L+ELF+ +G + K+ P G
Sbjct: 291 VELKSRFEQSVKEAADKYQGANLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGIS 350
Query: 311 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ GFV F+ A AL +NG + + + ++ + +++A+
Sbjct: 351 RGSGFVAFSSPEEAARALAEMNGRMIVSKPLYVALAQRKEDRRAR 395
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 17/196 (8%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L E L F G + +V V+R+ + G+ + +GF+ F + A R
Sbjct: 206 KFNNVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGE-GKSKCFGFVNFENADDAARS 264
Query: 140 LQTFNGTPM-----------PNGEQNFRLNWASF--GAGEKRDDTPDHTIFVGDLAADVT 186
++ NG + E+ L + F E D ++V +L +
Sbjct: 265 VEALNGKKVDGKEWYVGKAQKKSEREVELK-SRFEQSVKEAADKYQGANLYVKNLDDSID 323
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
D L+E F + + KV+ D G ++G GFV F E RA+ EMNG ++P+
Sbjct: 324 DDKLKELFTG-FGTITSCKVMRDP-NGISRGSGFVAFSSPEEAARALAEMNGRMIVSKPL 381
Query: 247 RIGPATNKKTVSASYQ 262
+ A K+ A Q
Sbjct: 382 YVALAQRKEDRRARLQ 397
>gi|431899704|gb|ELK07658.1| Polyadenylate-binding protein 4-like protein [Pteropus alecto]
Length = 370
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 136/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V+++++ R+ T + GY ++ F+ A A++ L T
Sbjct: 11 SLYVGDLHAEVTEDLLFKKFSAVGPVLSIRICRDLVTQRSLGYAYVNFLHLADAQKALDT 70
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N M G ++ RL W+ A ++ + +F+ +L + + L E F A +
Sbjct: 71 MN-FDMIKG-KSIRLMWSQRDAYLRKSGIGN--VFIKNLHKSIDNKTLYEHFSA-FGKIL 125
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
+KV+ D ++GY FV F ++ RA+ MNG + +GP N+K A Q
Sbjct: 126 SSKVMSD--DAGSRGYAFVHFQSQTAADRAIEAMNGALLKGCRLFVGPFKNRKDRQAELQ 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR-----CGFVQ 317
N T V++ N + DE L+E+FS +G+++ VK+ R GFV
Sbjct: 184 NKA-------NEFTNVYIKNFGDDMDDERLKEIFSHFGKILSVKVMTDSRGRSKGFGFVS 236
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
F A+ A+ ++NG L GQ + + + + +QA+
Sbjct: 237 FDSHEAAQRAVEIMNGKDLSGQPLFVGRAQKKAERQAE 274
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 140/308 (45%), Gaps = 34/308 (11%)
Query: 55 MWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI 114
MW+ + A + +G+ ++I +L +D L F+ G++++ KV+
Sbjct: 84 MWSQRDAYLRKSGIG-------------NVFIKNLHKSIDNKTLYEHFSAFGKILSSKVM 130
Query: 115 RNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR-----D 169
+ + GY F+ F S+ A+R ++ NG + RL F + R +
Sbjct: 131 SDDAGSR--GYAFVHFQSQTAADRAIEAMNGALLKGC----RLFVGPFKNRKDRQAELQN 184
Query: 170 DTPDHT-IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
+ T +++ + D+ D L+E F + + KV+ D GR+KG+GFV F
Sbjct: 185 KANEFTNVYIKNFGDDMDDERLKEIF-SHFGKILSVKVMTDS-RGRSKGFGFVSFDSHEA 242
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQN--SQVAQSD-DDPNNTTVFVGNLDS 285
RA+ MNG S +P+ +G A K A + Q+ Q +++ NLD
Sbjct: 243 AQRAVEIMNGKDLSGQPLFVGRAQKKAERQAELKLMFEQMKQERYRRFRGVKLYIKNLDD 302
Query: 286 IVTDEHLRELFSQYGQLVHVKI--PAGKRCGF--VQFADRSCAEEALRMLNGTQLGGQNI 341
+ DE LR FS +G + VK+ G+ GF + F+ A +A+ +NG LG +++
Sbjct: 303 SIDDERLRREFSSFGSISRVKVMKEEGRSKGFGLICFSSPEEATKAMVEMNGRILGSKSL 362
Query: 342 RLSWGRSP 349
++ + P
Sbjct: 363 NIALAQRP 370
>gi|410898224|ref|XP_003962598.1| PREDICTED: polyadenylate-binding protein 4-like [Takifugu rubripes]
Length = 653
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 140/283 (49%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVVKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + RA+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR-- 312
A A++ + T V++ N + DE L+ELF +YG+ + VK+ P GK
Sbjct: 180 EAELG----AKAKE---FTNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPTGKSRG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV + A +A+ +NGT+L G+ + + + + +QA+
Sbjct: 233 FGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKNERQAE 275
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 134/286 (46%), Gaps = 23/286 (8%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A+R ++
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 158
Query: 144 NGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
NG + N + F + A GA K +++ + D+ D L+E F
Sbjct: 159 NGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGDDMDDERLKELF-D 212
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+Y T KV++D TG+++G+GFV + + +A+ +MNG + + + +G A K
Sbjct: 213 KYGKTLSVKVMMDP-TGKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKNE 271
Query: 257 VSASYQNSQVAQSDDDPNN---TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA---- 309
A + + + +++ NLD + DE LR+ FS +G + K+
Sbjct: 272 RQAELKRKFEMLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEEGR 331
Query: 310 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL D+T+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A+ A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 33/221 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F G+ ++VKV+ + TG+ G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDP-TGKSRGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NGT + NG+ F G +K+++ +++ +
Sbjct: 248 VEDMNGTEL-NGKTVF------VGRAQKKNERQAELKRKFEMLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN---SQVAQSDDDPNNTTV 278
++P+ + A K+ A N ++A P NT +
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRAMPANTII 398
>gi|321461699|gb|EFX72729.1| hypothetical protein DAPPUDRAFT_308097 [Daphnia pulex]
Length = 336
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 96/174 (55%), Gaps = 9/174 (5%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+LWIG L+ +M E +L F GE A+KV+RNK TG G+GF +F A VL
Sbjct: 8 SLWIGGLEPYMTEEFLMRSFELMGEKPEAIKVMRNKHTGLPAGFGFCQFRDEKQAMEVLH 67
Query: 142 TFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
NG +P + F+LN ++ G T DH ++VGDL+ADV DY L + F A+Y
Sbjct: 68 KLNGKIIPYSQPPSRFKLNHSTNTKG----STADHALWVGDLSADVDDYGLYKCFSAKYN 123
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPAT 252
S + AKVV G ++GY FV F +ES+ A+T M G + P+R+ A
Sbjct: 124 SVQLAKVVRGS-NGESRGYAFVNFSNESDYKDALTHMQGHRGLGSNPLRVSLAI 176
>gi|302755232|ref|XP_002961040.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
gi|300171979|gb|EFJ38579.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
Length = 625
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 135/278 (48%), Gaps = 25/278 (8%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + ET L T F+ G V +V+V R+ T + GYG++ + S A A R ++
Sbjct: 38 SLYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAMEA 97
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ NG + R+ W+ ++ + IF+ +L + + L +TF A P
Sbjct: 98 LNYTPI-NG-KTIRIMWSHRDPSTRKSGVGN--IFIKNLDESIDNKALHDTFIAFGPILS 153
Query: 203 GAKVVIDRLTGRTKGYGFVRF-GDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
I GR+KGYGFV F DE+ L A+ ++NG+ KK A +
Sbjct: 154 CK---IAHQDGRSKGYGFVHFETDEAANL-AIEKVNGM----------QLVGKKVFVAKF 199
Query: 262 -QNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-----PAGKRCGF 315
+ S + + T VFV NLD + +E + E FS +G + +V I K GF
Sbjct: 200 VKRSDRLAATGETKFTNVFVKNLDPEMAEEEINEHFSTFGVITNVVIMKDENDKSKGFGF 259
Query: 316 VQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
V F D A A+ +N +QLG + I + + + ++
Sbjct: 260 VNFDDPEAARAAVETMNNSQLGSRTIYVGRAQKKAERE 297
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 131/311 (42%), Gaps = 47/311 (15%)
Query: 55 MWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI 114
MW+ + + + +GV ++I +L +D L+ F G +++ K+
Sbjct: 111 MWSHRDPSTRKSGVG-------------NIFIKNLDESIDNKALHDTFIAFGPILSCKIA 157
Query: 115 RNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDD---- 170
Q G+ +GYGF+ F + A ++ NG + G++ F + KR D
Sbjct: 158 H--QDGRSKGYGFVHFETDEAANLAIEKVNGMQLV-GKKVFVAKFV------KRSDRLAA 208
Query: 171 ---TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA---KVVIDRLTGRTKGYGFVRFG 224
T +FV +L ++ + + E F ST G V++ ++KG+GFV F
Sbjct: 209 TGETKFTNVFVKNLDPEMAEEEINEHF-----STFGVITNVVIMKDENDKSKGFGFVNFD 263
Query: 225 DESEQLRAMTEMNGVFCSTRPMRIGPATNK----KTVSASYQNSQVAQSDDDPNNTTVFV 280
D A+ MN +R + +G A K + + ++ ++ Q ++V
Sbjct: 264 DPEAARAAVETMNNSQLGSRTIYVGRAQKKAEREQILRRQFEEKRMEQFQK-YQGANLYV 322
Query: 281 GNLDSIVTDEHLRELFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQ 335
NLD + DE L++ FS+YG + K+ K GFV F A A NG
Sbjct: 323 KNLDDSIDDETLKQEFSRYGNITSAKVMRDEKGISKGFGFVCFTSPEEASRAATETNGLM 382
Query: 336 LGGQNIRLSWG 346
+ G+ I ++
Sbjct: 383 INGKPIYVAMA 393
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 19/187 (10%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++ +L M E +N F+ G + V VI + + +G+GF+ F A ++T
Sbjct: 217 VFVKNLDPEMAEEEINEHFSTFGVITNV-VIMKDENDKSKGFGFVNFDDPEAARAAVETM 275
Query: 144 NGTPMPNGEQNFRLNWASFGAG----------EKRDDTPDH----TIFVGDLAADVTDYM 189
N + + G + + A A EKR + ++V +L + D
Sbjct: 276 NNSQL--GSRTIYVGRAQKKAEREQILRRQFEEKRMEQFQKYQGANLYVKNLDDSIDDET 333
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
L++ F +RY + AKV+ D G +KG+GFV F E RA TE NG+ + +P+ +
Sbjct: 334 LKQEF-SRYGNITSAKVMRDE-KGISKGFGFVCFTSPEEASRAATETNGLMINGKPIYVA 391
Query: 250 PATNKKT 256
A K+
Sbjct: 392 MAQRKEI 398
>gi|7528270|gb|AAF63202.1|AF240679_1 poly(A)-binding protein [Cucumis sativus]
Length = 649
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 154/321 (47%), Gaps = 35/321 (10%)
Query: 41 MMMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRT-LWIGDLQYWMDETYLN 99
M +PPQPQ A P A G G + T L++GDL + ++ L
Sbjct: 1 MAQVPPQPQV------PNSGADPAANG--------GANQHVTTSLYVGDLDVNVTDSQLY 46
Query: 100 TCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNW 159
F G+VV+V+V R+ + + GYG++ + + A R L N TP+ NG R+ +
Sbjct: 47 DLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPVDASRALDVLNFTPL-NGNP-IRVMY 104
Query: 160 ASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYG 219
+ ++ + + IF+ +L + L +TF A + S KV D +G++KG+G
Sbjct: 105 SHRDPSVRKSGSGN--IFIKNLDKAIDHKALHDTFSA-FGSILSCKVATDS-SGQSKGFG 160
Query: 220 FVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVF 279
FV+F E L+A+ ++NG+ + + + +GP K+ + + ++ NN VF
Sbjct: 161 FVQFDTEEAALKAIEKLNGMLLNDKQVFVGPFLRKQERESVSEKTKF-------NN--VF 211
Query: 280 VGNLDSIVTDEHLRELFSQYGQLVHVKI----PAGKRC-GFVQFADRSCAEEALRMLNGT 334
V NL ++E L+ +F ++G + V + +C GFV F + A ++ LNG
Sbjct: 212 VKNLAETTSEEDLKNMFGEFGPITSVVVMRDGEGKSKCFGFVNFENADDAARSVEALNGK 271
Query: 335 QLGGQNIRLSWGRSPSNKQAQ 355
++ G+ + + S ++ +
Sbjct: 272 KVDGKEWYVGKAQKKSEREVE 292
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 137/285 (48%), Gaps = 19/285 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ F+ G +++ KV + +GQ +G+GF++F + A + ++
Sbjct: 118 NIFIKNLDKAIDHKALHDTFSAFGSILSCKVATDS-SGQSKGFGFVQFDTEEAALKAIEK 176
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT----IFVGDLAADVTDYMLQETFRARY 198
NG + N +Q F F ++R+ + T +FV +LA ++ L+ F
Sbjct: 177 LNGMLL-NDKQVF---VGPFLRKQERESVSEKTKFNNVFVKNLAETTSEEDLKNMFGEFG 232
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
P T + VV+ G++K +GFV F + + R++ +NG + +G A K
Sbjct: 233 PIT--SVVVMRDGEGKSKCFGFVNFENADDAARSVEALNGKKVDGKEWYVGKAQKKSERE 290
Query: 259 ASYQNS---QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAG-- 310
++ V ++ D ++V NLD + D+ L+ELF+ +G + K+ P G
Sbjct: 291 VELKSRFEQSVKEAADKYQGANLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGIS 350
Query: 311 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ GFV F+ A AL +NG + + + ++ + ++ A+
Sbjct: 351 RGSGFVAFSSPEEAARALAEMNGRMIVSKPLYVALAQRKEDRIAR 395
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 17/196 (8%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L E L F G + +V V+R+ + G+ + +GF+ F + A R
Sbjct: 206 KFNNVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGE-GKSKCFGFVNFENADDAARS 264
Query: 140 LQTFNGTPM-----------PNGEQNFRLNWASF--GAGEKRDDTPDHTIFVGDLAADVT 186
++ NG + E+ L + F E D ++V +L +
Sbjct: 265 VEALNGKKVDGKEWYVGKAQKKSEREVELK-SRFEQSVKEAADKYQGANLYVKNLDDSID 323
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
D L+E F + + KV+ D G ++G GFV F E RA+ EMNG ++P+
Sbjct: 324 DDKLKELFTG-FGTITSCKVMRDP-NGISRGSGFVAFSSPEEAARALAEMNGRMIVSKPL 381
Query: 247 RIGPATNKKTVSASYQ 262
+ A K+ A Q
Sbjct: 382 YVALAQRKEDRIARLQ 397
>gi|390601667|gb|EIN11061.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 877
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 106/211 (50%), Gaps = 39/211 (18%)
Query: 83 TLWIGDLQYWMDETYLN-TCFAHTGEVVAVKVIRNKQTGQIE-----GYGFIEFISRAGA 136
TLW G+L+ WMDE Y C V +KV + GQ GY F+ F + A A
Sbjct: 134 TLWWGNLEPWMDEEYAKQVCGLMGWNPVDIKVPSPAEAGQSAQANNPGYCFLSFSNPAQA 193
Query: 137 ERVLQTFNGT-----PMPNGEQNFRLNWASFGAGEKRDDT-------------PDHTIFV 178
VL NG MPN + F LNWAS + + +++IFV
Sbjct: 194 AAVLAQVNGNGGNAAIMPNSTRPFTLNWASSIPQSALNTSMHPPNSVPGQPFQKEYSIFV 253
Query: 179 GDLAADVTDYMLQETFRA--------RYP-------STKGAKVVIDRLTGRTKGYGFVRF 223
GDLA + ++ L FR R P S K AK+++D TG +KGYGFVRF
Sbjct: 254 GDLAPEASNSDLVAVFRNPVLGLRNDREPKFIRPFLSCKSAKIMLDPATGVSKGYGFVRF 313
Query: 224 GDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
DE++Q RA+ EM+G++C +RPMRI PAT K
Sbjct: 314 TDEADQQRALVEMHGLYCLSRPMRISPATAK 344
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 54/77 (70%)
Query: 272 DPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRML 331
DP NTTVFVG L +++++ LR F+ +G + +VK+P GK CGFVQF ++ AE A+ +
Sbjct: 533 DPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKM 592
Query: 332 NGTQLGGQNIRLSWGRS 348
G +GG IRLSWGRS
Sbjct: 593 QGFPIGGSRIRLSWGRS 609
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++G L + E L T FA G++ VKV K G F++F+ +A AER ++
Sbjct: 538 TVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPVGKHCG------FVQFVRKADAERAIEK 591
Query: 143 FNGTPMPNGEQNFRLNW 159
G P+ G RL+W
Sbjct: 592 MQGFPI--GGSRIRLSW 606
>gi|291399204|ref|XP_002715240.1| PREDICTED: poly A binding protein, cytoplasmic 4-like [Oryctolagus
cuniculus]
Length = 644
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 136/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L++LFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKDLFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++GG+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEIGGKVIFVGRAQKKVERQAE 275
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L++ F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKDLF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEIGGKVIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKDLFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-GGKVIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|400234898|gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 140/280 (50%), Gaps = 20/280 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ +L++GDL + ++ L F G+VV+V+V R+ + + GYG++ + + A R L
Sbjct: 26 VTSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARAL 85
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
+ N TP+ + R+ +++ +R + + IF+ +L + L +TF A + +
Sbjct: 86 EVLNFTPLHG--KPIRIMYSNRDPTIRR--SGNGNIFIKNLDKAIDHKALHDTFSA-FGN 140
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
KV +D +G++KGYGFV++ + +A+ ++NG+ + + + +GP K+ +
Sbjct: 141 ILSCKVAVDS-SGQSKGYGFVQYDSDEAAQKAIEKLNGMLLNDKQVYVGPFVRKQERDMA 199
Query: 261 YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI----PAGKRC-GF 315
D T VFV NL +E LR++F ++G + V + RC GF
Sbjct: 200 V---------DKTRFTNVFVKNLSESTLEEELRKIFGEFGTITSVAVMKDEDGKSRCFGF 250
Query: 316 VQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
V F + A A+ LNG +L ++ + + S ++ +
Sbjct: 251 VNFENAEDAARAVEALNGYKLDNKDWFVGRAQKKSEREME 290
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 140/283 (49%), Gaps = 15/283 (5%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ F+ G +++ KV + +GQ +GYGF+++ S A++ ++
Sbjct: 116 NIFIKNLDKAIDHKALHDTFSAFGNILSCKVAVDS-SGQSKGYGFVQYDSDEAAQKAIEK 174
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS-- 200
NG + N +Q + F ++RD D T F ++++ L+E R +
Sbjct: 175 LNGMLL-NDKQVY---VGPFVRKQERDMAVDKTRFTNVFVKNLSESTLEEELRKIFGEFG 230
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--KTVS 258
T + V+ G+++ +GFV F + + RA+ +NG + +G A K + +
Sbjct: 231 TITSVAVMKDEDGKSRCFGFVNFENAEDAARAVEALNGYKLDNKDWFVGRAQKKSEREME 290
Query: 259 ASYQNSQVAQ-SDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAG--KR 312
++ Q AQ + D +++ NLD ++D+ L+ELFS YG + K+ P+G K
Sbjct: 291 LKHRFEQSAQEAVDKSQGLNLYLKNLDDSISDDKLKELFSPYGTITSCKVMRDPSGVSKG 350
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV F+ A AL +NG + + + ++ + ++A+
Sbjct: 351 SGFVAFSTPEEASRALSEMNGKMVVSKPLYVALAQRKEERRAR 393
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 15/192 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+++ +L E L F G + +V V+++ + G+ +GF+ F + A R ++
Sbjct: 207 NVFVKNLSESTLEEELRKIFGEFGTITSVAVMKD-EDGKSRCFGFVNFENAEDAARAVEA 265
Query: 143 FNGTPMPN-----------GEQNFRLNWA-SFGAGEKRDDTPDHTIFVGDLAADVTDYML 190
NG + N E+ L A E D + +++ +L ++D L
Sbjct: 266 LNGYKLDNKDWFVGRAQKKSEREMELKHRFEQSAQEAVDKSQGLNLYLKNLDDSISDDKL 325
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+E F + Y + KV+ D +G +KG GFV F E RA++EMNG ++P+ +
Sbjct: 326 KELF-SPYGTITSCKVMRDP-SGVSKGSGFVAFSTPEEASRALSEMNGKMVVSKPLYVAL 383
Query: 251 ATNKKTVSASYQ 262
A K+ A Q
Sbjct: 384 AQRKEERRARLQ 395
>gi|350585908|ref|XP_003482078.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Sus scrofa]
Length = 660
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 136/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE+L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKVIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|307211508|gb|EFN87603.1| tRNA selenocysteine-associated protein 1 [Harpegnathos saltator]
Length = 295
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 100/179 (55%), Gaps = 7/179 (3%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGA 136
P + LW+G L+ +M E+++ F GE VKV+RN+ TG+ GY F+ F + A
Sbjct: 4 PMVLCQLWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMA 63
Query: 137 ERVLQTFNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG +P N FRLN AS D + +I+VGDL+ DV DY L F
Sbjct: 64 LDAMHKLNGKVIPGSNPSVRFRLNHASTTGKPAAD--REFSIWVGDLSTDVDDYSLYRAF 121
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPAT 252
A+Y S + AKV++D +G +KGYGFVRF +E EQ +++ MNG T+ ++I A
Sbjct: 122 AAKYNSIRTAKVILDS-SGFSKGYGFVRFANEDEQKNSLSTMNGYRGLGTKSLKICNAV 179
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 105/251 (41%), Gaps = 32/251 (12%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++G L +T+ + F + KV+ +R TG GY FV F + L AM +
Sbjct: 10 LWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 236 MNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLREL 295
+NG ++ P +N S + D +++VG+L + V D L
Sbjct: 70 LNG--------KVIPGSNPSVRFRLNHASTTGKPAAD-REFSIWVGDLSTDVDDYSLYRA 120
Query: 296 FS-QYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNGTQ-LGGQNIRLS---- 344
F+ +Y + K+ K GFV+FA+ + +L +NG + LG +++++
Sbjct: 121 FAAKYNSIRTAKVILDSSGFSKGYGFVRFANEDEQKNSLSTMNGYRGLGTKSLKICNAVP 180
Query: 345 --W----GRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAAAAPQDPSMYYGGYP---GY 395
W G +P + P+ N+ Y Y Y+ Y + YY P Y
Sbjct: 181 RPWNKISGSTPPQSTSDYPPSNMNSDAYNY---YDTSSYWNSYSAWQQGYYESEPTSDAY 237
Query: 396 GNYQQPQQPQQ 406
+Y Q+P++
Sbjct: 238 NSYVSDQKPEE 248
>gi|261199248|ref|XP_002626025.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239594233|gb|EEQ76814.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
Length = 783
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 130/276 (47%), Gaps = 29/276 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++G+L + E L F+ G+V +++V R+ T + GY ++ + + A ER L+
Sbjct: 56 SLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRD----DTPDHTIFVGDLAADVTDYMLQETFRARY 198
N T + + R+ W+ +RD T +F+ +L + + L +TF A +
Sbjct: 116 LNYTLIKG--KPCRIMWS------QRDPALRKTGQGNVFIKNLDTAIDNKALHDTF-AAF 166
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
+ KV D G +KGYGFV + A+ +NG+ + + + +G KK
Sbjct: 167 GNILSCKVAQDEF-GNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQ 225
Query: 259 ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI----PAGKR-- 312
+ ++ + N T V+V NLD+ VT+E RELF +YG + I GK
Sbjct: 226 SKFEEMKA-------NFTNVYVKNLDTKVTNEEFRELFGKYGDITSASITHDSETGKSRG 278
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
GFV F A A+ LN + GQ +L GR+
Sbjct: 279 FGFVNFVKHESAAAAVEELNDKEFKGQ--KLYVGRA 312
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 102/230 (44%), Gaps = 7/230 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G +++ KV ++ + G +GYGF+ + + A ++
Sbjct: 144 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAATNAIKH 202
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH--TIFVGDLAADVTDYMLQETFRARYPS 200
NG + + + A K ++ + ++V +L VT+ +E F +Y
Sbjct: 203 VNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNLDTKVTNEEFRELF-GKYGD 261
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A + D TG+++G+GFV F A+ E+N + + +G A K
Sbjct: 262 ITSASITHDSETGKSRGFGFVNFVKHESAAAAVEELNDKEFKGQKLYVGRAQKKHEREEE 321
Query: 261 YQNSQVAQSDDDPNN---TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 307
+ A + + ++V NL + DE LR+LF +G + ++
Sbjct: 322 LRKQHEAARVEKASKYQGVNLYVKNLTDDIDDEKLRDLFIGFGNITSARV 371
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 91/193 (47%), Gaps = 19/193 (9%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+++VG+L + VT+ ML E F + +V D +T R+ GY +V + + ++ RA+
Sbjct: 56 SLYVGELDSSVTEAMLFELFSS-IGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 114
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
++N +P RI + + + Q + VF+ NLD+ + ++ L +
Sbjct: 115 DLNYTLIKGKPCRIMWSQRDPALRKTGQGN-------------VFIKNLDTAIDNKALHD 161
Query: 295 LFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP 349
F+ +G ++ K+ K GFV + A A++ +NG L + + + +
Sbjct: 162 TFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAK 221
Query: 350 SNKQAQPDPNQWN 362
++Q++ + + N
Sbjct: 222 KDRQSKFEEMKAN 234
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 17/120 (14%)
Query: 248 IGPATNKKTVSASYQNSQVAQSDDDPNNT----------TVFVGNLDSIVTDEHLRELFS 297
+ +TN TV+ + N + PN+ +++VG LDS VT+ L ELFS
Sbjct: 17 VESSTNGTTVNTNVANDAAGDGSETPNSAAPSTTQPHSASLYVGELDSSVTEAMLFELFS 76
Query: 298 QYGQLVHVKI---PAGKRC---GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG-RSPS 350
GQ+ +++ +R +V + + + E AL LN T + G+ R+ W R P+
Sbjct: 77 SIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPA 136
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/251 (15%), Positives = 88/251 (35%), Gaps = 76/251 (30%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+++ +L + F G++ + + + +TG+ G+GF+ F+ A ++
Sbjct: 237 NVYVKNLDTKVTNEEFRELFGKYGDITSASITHDSETGKSRGFGFVNFVKHESAAAAVEE 296
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGDLAA 183
N ++ F+ G +K+ + + ++V +L
Sbjct: 297 LN-------DKEFKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNLTD 349
Query: 184 DVTDYMLQETF------------------------RARYPSTK----------------- 202
D+ D L++ F + + S K
Sbjct: 350 DIDDEKLRDLFIGFGNITSARVMRDTIADAGSESEKEKEISNKENVKEEAKKESAEEESS 409
Query: 203 ---------GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
+K +++ G++KG+GFV F + E +A+TEMN + +P+ + A
Sbjct: 410 DKSDKAEKSDSKKTLEKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNGKPLYVALAQR 469
Query: 254 KKTVSASYQNS 264
K + + S
Sbjct: 470 KDVRKSQLEAS 480
>gi|348553000|ref|XP_003462315.1| PREDICTED: polyadenylate-binding protein 4-like isoform 4 [Cavia
porcellus]
Length = 631
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 137/283 (48%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR-- 312
A T V++ N V DE+L+ELFSQ+G+ + VK+ P+GK
Sbjct: 180 EAEL-------GAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKKVERQAE 275
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 136/289 (47%), Gaps = 23/289 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D +G++KG+GFV + + +A+ EMNG + + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQK 268
Query: 254 KKTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA- 309
K A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 269 KVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE 328
Query: 310 ---GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 329 DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + NG+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-NGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|348552998|ref|XP_003462314.1| PREDICTED: polyadenylate-binding protein 4-like isoform 3 [Cavia
porcellus]
Length = 615
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 137/283 (48%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR-- 312
A T V++ N V DE+L+ELFSQ+G+ + VK+ P+GK
Sbjct: 180 EAEL-------GAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKKVERQAE 275
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 136/289 (47%), Gaps = 23/289 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D +G++KG+GFV + + +A+ EMNG + + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQK 268
Query: 254 KKTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA- 309
K A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 269 KVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE 328
Query: 310 ---GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 329 DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + NG+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-NGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|304798|gb|AAA28828.1| polyadenylate-binding protein [Drosophila melanogaster]
gi|304800|gb|AAA02941.1| polyadenylate-binding protein [Drosophila melanogaster]
Length = 465
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F+ G V + K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGN---DPYAFIEYSNYQAATTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWA-SFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N E+ ++NWA S G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLF--LEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F ++E A+ MN + ++R +R +T K
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNRQWIASRSIRTNWSTRKLPPPRE 180
Query: 255 ------------------KTVSASYQNS-QVAQSDDDPNNTTVFVGNLD-SIVTDEHLRE 294
V S +++ + + P NTTV+ G ++++D+ + +
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 295 LFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 241 HFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGK 293
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 327
D+ T++VGNLDS V+++ L LFS G + KI P F+++++ A A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTA 61
Query: 328 LRMLNGTQLGGQNIRLSWGRSPSNK 352
L +N + I+++W SP N+
Sbjct: 62 LTAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|335291035|ref|XP_003127861.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Sus scrofa]
Length = 644
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 136/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE+L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKVIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|50304975|ref|XP_452445.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641578|emb|CAH01296.1| KLLA0C05522p [Kluyveromyces lactis]
Length = 540
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 114/236 (48%), Gaps = 51/236 (21%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQI------------------- 122
RTLW+GDL DE + + + G+ V VK+I++K +
Sbjct: 20 RTLWMGDLDPGFDELIIASIWQSLGKSVKVKLIKSKTNALVPINSTSIPNNASSNALEIN 79
Query: 123 --------------EGYGFIEFISRAGAERVLQTFNGTPMPN--------------GEQN 154
GY F+EF S A++ L T N TP+PN G++
Sbjct: 80 GVSFIDPNKTNLHHAGYCFVEFESFEDAQQAL-TLNATPIPNISCNTTASKRTNDDGKRK 138
Query: 155 FRLNWASFGAGEKRDD--TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLT 212
FRLNWA+ GA TP+ ++FVGDL+ T+ L F+ +Y S K +V+ D +T
Sbjct: 139 FRLNWAN-GATLHSTILPTPEFSLFVGDLSPFATEADLLSLFQTKYNSVKTVRVMTDPIT 197
Query: 213 GRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQ 268
G ++ +GFVRF +E+E+ A+ EMNGV R +R+ AT + V+ + + + Q
Sbjct: 198 GASRCFGFVRFANETERRNALIEMNGVQFQGRQLRVAYATPRNNVAQQHLSGNLGQ 253
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 47/72 (65%)
Query: 276 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQ 335
TTVFVG L+ + + L ELF +G + VKIP GK+CGFV++ +R AE A+ L G
Sbjct: 445 TTVFVGGLNPNINELQLFELFKPFGTITDVKIPPGKQCGFVKYNERLEAEAAINGLQGFI 504
Query: 336 LGGQNIRLSWGR 347
+ G IRLSWGR
Sbjct: 505 IMGSPIRLSWGR 516
>gi|348552994|ref|XP_003462312.1| PREDICTED: polyadenylate-binding protein 4-like isoform 1 [Cavia
porcellus]
Length = 660
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 136/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE+L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEINGKIIFVGRAQKKVERQAE 275
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG + + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + NG+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-NGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|348552996|ref|XP_003462313.1| PREDICTED: polyadenylate-binding protein 4-like isoform 2 [Cavia
porcellus]
Length = 644
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 136/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE+L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEINGKIIFVGRAQKKVERQAE 275
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG + + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + NG+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-NGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|124806145|ref|XP_001350640.1| polyadenylate-binding protein, putative [Plasmodium falciparum 3D7]
gi|23496765|gb|AAN36320.1|AE014847_47 polyadenylate-binding protein, putative [Plasmodium falciparum 3D7]
gi|119352249|gb|ABL63812.1| polyadenylate-binding protein [Plasmodium falciparum]
Length = 875
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 130/257 (50%), Gaps = 20/257 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F G V +++V R+ T + GY ++ + + A AER L T
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDT 76
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N T + Q RL W+ ++ T + IFV +L + + L +TF + + +
Sbjct: 77 LNYTNIKG--QPARLMWSHRDPSLRKSGTGN--IFVKNLDKSIDNKALFDTF-SMFGNIL 131
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KV D G++K YGFV + DE A+ ++NGV ++ + +GP KK+ A+
Sbjct: 132 SCKVATDEF-GKSKSYGFVHYEDEESAKEAIEKVNGVQLGSKNVYVGPFI-KKSERAT-- 187
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP---AGKRCGFVQFA 319
+D T ++V N VT+ HLR+LF+ YG++ + + ++ F+ +A
Sbjct: 188 --------NDTKFTNLYVKNFPDSVTETHLRQLFNPYGEITSMIVKMDNKNRKFCFINYA 239
Query: 320 DRSCAEEALRMLNGTQL 336
D A+ A+ LNG ++
Sbjct: 240 DAESAKNAMDNLNGKKI 256
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 19/172 (11%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+++VGDL DVT+ +L E F +V D +T ++ GY +V + + ++ RA+
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNT-VGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALD 75
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
+N +P R+ S+++ + +S +FV NLD + ++ L +
Sbjct: 76 TLNYTNIKGQPARL---------MWSHRDPSLRKS----GTGNIFVKNLDKSIDNKALFD 122
Query: 295 LFSQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
FS +G ++ K+ K GFV + D A+EA+ +NG QLG +N+
Sbjct: 123 TFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGVQLGSKNV 174
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
+++ +L + D ML+E F + + AKV+ D ++KG+GFV F + E +A+TE
Sbjct: 452 LYIKNLDDGIDDIMLRELFEP-FGTITSAKVMRDE-KEQSKGFGFVCFASQEEANKAVTE 509
Query: 236 MNGVFCSTRPMRIGPA 251
M+ + +P+ +G A
Sbjct: 510 MHLKIINGKPLYVGLA 525
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 277 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKI----PAGKRCG--FVQFADRSCAEEALRM 330
+++VG+L+ VT+ L E+F+ G + +++ K G +V + + + AE AL
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDT 76
Query: 331 LNGTQLGGQNIRLSWG-RSPS 350
LN T + GQ RL W R PS
Sbjct: 77 LNYTNIKGQPARLMWSHRDPS 97
>gi|239615396|gb|EEQ92383.1| polyadenylate-binding protein [Ajellomyces dermatitidis ER-3]
gi|327356743|gb|EGE85600.1| polyadenylate-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 783
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 130/276 (47%), Gaps = 29/276 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++G+L + E L F+ G+V +++V R+ T + GY ++ + + A ER L+
Sbjct: 56 SLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRD----DTPDHTIFVGDLAADVTDYMLQETFRARY 198
N T + + R+ W+ +RD T +F+ +L + + L +TF A +
Sbjct: 116 LNYTLIKG--KPCRIMWS------QRDPALRKTGQGNVFIKNLDTAIDNKALHDTF-AAF 166
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
+ KV D G +KGYGFV + A+ +NG+ + + + +G KK
Sbjct: 167 GNILSCKVAQDEF-GNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQ 225
Query: 259 ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI----PAGKR-- 312
+ ++ + N T V+V NLD+ VT+E RELF +YG + I GK
Sbjct: 226 SKFEEMKA-------NFTNVYVKNLDTEVTNEEFRELFGKYGDITSASITHDSETGKSRG 278
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
GFV F A A+ LN + GQ +L GR+
Sbjct: 279 FGFVNFVKHESAAAAVEELNDKEFKGQ--KLYVGRA 312
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 103/230 (44%), Gaps = 7/230 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G +++ KV ++ + G +GYGF+ + + A ++
Sbjct: 144 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAATNAIKH 202
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH--TIFVGDLAADVTDYMLQETFRARYPS 200
NG + + + A K ++ + ++V +L +VT+ +E F +Y
Sbjct: 203 VNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNLDTEVTNEEFRELF-GKYGD 261
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A + D TG+++G+GFV F A+ E+N + + +G A K
Sbjct: 262 ITSASITHDSETGKSRGFGFVNFVKHESAAAAVEELNDKEFKGQKLYVGRAQKKHEREEE 321
Query: 261 YQNSQVAQSDDDPNN---TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 307
+ A + + ++V NL + DE LR+LF +G + ++
Sbjct: 322 LRKQHEAARVEKASKYQGVNLYVKNLTDDIDDEKLRDLFIGFGNITSARV 371
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 91/193 (47%), Gaps = 19/193 (9%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+++VG+L + VT+ ML E F + +V D +T R+ GY +V + + ++ RA+
Sbjct: 56 SLYVGELDSSVTEAMLFELFSS-IGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 114
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
++N +P RI + + + Q + VF+ NLD+ + ++ L +
Sbjct: 115 DLNYTLIKGKPCRIMWSQRDPALRKTGQGN-------------VFIKNLDTAIDNKALHD 161
Query: 295 LFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP 349
F+ +G ++ K+ K GFV + A A++ +NG L + + + +
Sbjct: 162 TFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAK 221
Query: 350 SNKQAQPDPNQWN 362
++Q++ + + N
Sbjct: 222 KDRQSKFEEMKAN 234
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 17/120 (14%)
Query: 248 IGPATNKKTVSASYQNSQVAQSDDDPNNT----------TVFVGNLDSIVTDEHLRELFS 297
+ +TN TV+ + N + PN+ +++VG LDS VT+ L ELFS
Sbjct: 17 VESSTNGTTVNTNVANDAAGDGSETPNSAAPSTTQPHSASLYVGELDSSVTEAMLFELFS 76
Query: 298 QYGQLVHVKI---PAGKRC---GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG-RSPS 350
GQ+ +++ +R +V + + + E AL LN T + G+ R+ W R P+
Sbjct: 77 SIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPA 136
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/251 (15%), Positives = 88/251 (35%), Gaps = 76/251 (30%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+++ +L + F G++ + + + +TG+ G+GF+ F+ A ++
Sbjct: 237 NVYVKNLDTEVTNEEFRELFGKYGDITSASITHDSETGKSRGFGFVNFVKHESAAAAVEE 296
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGDLAA 183
N ++ F+ G +K+ + + ++V +L
Sbjct: 297 LN-------DKEFKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNLTD 349
Query: 184 DVTDYMLQETF------------------------RARYPSTK----------------- 202
D+ D L++ F + + S K
Sbjct: 350 DIDDEKLRDLFIGFGNITSARVMRDTIADAGSESEKEKEISNKENVKEEAKKESAEEESS 409
Query: 203 ---------GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
+K +++ G++KG+GFV F + E +A+TEMN + +P+ + A
Sbjct: 410 DKSDKAEKSDSKKTLEKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNGKPLYVALAQR 469
Query: 254 KKTVSASYQNS 264
K + + S
Sbjct: 470 KDVRKSQLEAS 480
>gi|149023879|gb|EDL80376.1| rCG31475, isoform CRA_b [Rattus norvegicus]
Length = 656
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 135/283 (47%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AGKR 312
A T V++ N V DE+LRELFSQ+G+ + VK+ K
Sbjct: 180 EAEL-------GAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV + A +A+ +NG ++ G++I + + +QA+
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAE 275
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A + +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAANKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLRELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRD-CSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A +A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAANKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRD-CSGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG M +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEM-SGKSIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|149023878|gb|EDL80375.1| rCG31475, isoform CRA_a [Rattus norvegicus]
Length = 660
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 135/283 (47%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AGKR 312
A T V++ N V DE+LRELFSQ+G+ + VK+ K
Sbjct: 180 EAEL-------GAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV + A +A+ +NG ++ G++I + + +QA+
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAE 275
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A + +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAANKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLRELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRD-CSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A +A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAANKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRD-CSGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG M +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEM-SGKSIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|344287655|ref|XP_003415568.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Loxodonta
africana]
Length = 631
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKVIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|119496945|ref|XP_001265244.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
gi|158512647|sp|A1D4K4.1|PABP_NEOFI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|119413406|gb|EAW23347.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
Length = 751
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 144/301 (47%), Gaps = 27/301 (8%)
Query: 53 PAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
P + A ++A+P A A P +L++G+L + E L F+ G+V +++
Sbjct: 30 PEVTAVESASPSATPSANQPHSA-------SLYVGELDPSVTEAMLYELFSSIGQVASIR 82
Query: 113 VIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTP 172
V R+ T + GY ++ + + A ER L+ N T + + R+ W+ ++ T
Sbjct: 83 VCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKG--KPCRIMWSQRDPALRK--TG 138
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+F+ +L A + + L +TF A + + KV D G +KGYGFV + A
Sbjct: 139 QGNVFIKNLDAAIDNKALHDTF-AAFGNILSCKVAQDEF-GNSKGYGFVHYETAEAANNA 196
Query: 233 MTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 292
+ +NG+ + + + +G +KK + ++ + N T V++ N+D VTDE
Sbjct: 197 IKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKA-------NFTNVYIKNIDQEVTDEEF 249
Query: 293 RELFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
R++F ++G++ + + GFV F+ A+ A+ +N ++ GQ +L GR
Sbjct: 250 RKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQ--KLYVGR 307
Query: 348 S 348
+
Sbjct: 308 A 308
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 111/236 (47%), Gaps = 22/236 (9%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L+ FA G +++ KV ++ + G +GYGF+ + + A ++
Sbjct: 142 VFIKNLDAAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHV 200
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDH--------TIFVGDLAADVTDYMLQETFR 195
NG + N ++ F + S K+D +++ ++ +VTD ++ F
Sbjct: 201 NGMLL-NDKKVFVGHHIS-----KKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFE 254
Query: 196 ARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK- 254
++ A + D+ G+++G+GFV F A+ EMN + + +G A K
Sbjct: 255 -KFGEITSATLSRDQ-EGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKH 312
Query: 255 ---KTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 307
+ + Y+ +++ ++ ++V NL V DE LRELFS +G + K+
Sbjct: 313 EREEELRKQYEAARLEKASK-YQGVNLYVKNLTDDVDDEKLRELFSPFGTITSAKV 367
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 87/238 (36%), Gaps = 60/238 (25%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I ++ + + F GE+ + + R+ Q G+ G+GF+ F + A+ +
Sbjct: 235 VYIKNIDQEVTDEEFRKMFEKFGEITSATLSRD-QEGKSRGFGFVNFSTHDSAQAAVDEM 293
Query: 144 NGTPMP-------------NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYML 190
N + E+ R + + EK ++V +L DV D L
Sbjct: 294 NDKEIKGQKLYVGRAQKKHEREEELRKQYEA-ARLEKASKYQGVNLYVKNLTDDVDDEKL 352
Query: 191 QETFRARYPSTKGAKVVIDRLT-------------------------------------- 212
+E F + + + AKV+ D +T
Sbjct: 353 RELF-SPFGTITSAKVMRDTVTAGETSESEKEKESNKENEKEGEEKTEEKPKESEEEAKK 411
Query: 213 ------GRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNS 264
G++KG+GFV F E +A+TEMN + +P+ + A K + + S
Sbjct: 412 TEKKILGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEAS 469
>gi|426215230|ref|XP_004001877.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Ovis aries]
Length = 631
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 137/283 (48%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR-- 312
A T V++ N V DE+L+ELFSQ+G+ + VK+ P+GK
Sbjct: 180 EAEL-------GAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQKKVERQAE 275
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 136/289 (47%), Gaps = 23/289 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D +G++KG+GFV + + +A+ EMNG + + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQK 268
Query: 254 KKTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA- 309
K A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 269 KVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE 328
Query: 310 ---GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 329 DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-TGKVIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|413918857|gb|AFW58789.1| hypothetical protein ZEAMMB73_983608 [Zea mays]
Length = 412
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 142/282 (50%), Gaps = 27/282 (9%)
Query: 60 AAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQT 119
+P A GVA QP +L++GDL+ + ++ L F+ G+VV+V+V R+ +
Sbjct: 19 VVSPGAVGVA-------QPLPTTSLYVGDLEGAVSDSQLYELFSQAGQVVSVRVCRDVTS 71
Query: 120 GQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVG 179
+ GY ++ + + A R L+ N + N + R+ +++ +R + + IF+
Sbjct: 72 RRSLGYAYVNYSNPLDAARALEVLNFAALNN--KPIRVMYSNRDPSSRRSGSAN--IFIK 127
Query: 180 DLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV 239
+L + + L ETF + + + KV +D G++KG+GFV++ E A+ +NG+
Sbjct: 128 NLDKTIDNKTLHETF-SSFGTILSCKVAVDE-AGQSKGFGFVQYDKEEAAQNAIKSLNGM 185
Query: 240 FCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQY 299
+ +P+ +GP K+ S+ ++ NN VFV NL T E L ++F +Y
Sbjct: 186 LINDKPVFVGPFVRKQERDHSFDKTKF-------NN--VFVKNLSESTTKEDLLKIFGEY 236
Query: 300 GQL----VHVKIPAGKRC-GFVQFADRSCAEEALRMLNGTQL 336
G + V + + RC GF+ F + A A++ LNG ++
Sbjct: 237 GDITSAVVMIGMDGKSRCFGFINFENPDAASHAVQELNGKKI 278
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 136/283 (48%), Gaps = 19/283 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L+ F+ G +++ KV + + GQ +G+GF+++ A+ +++
Sbjct: 124 IFIKNLDKTIDNKTLHETFSSFGTILSCKVAVD-EAGQSKGFGFVQYDKEEAAQNAIKSL 182
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT----IFVGDLAADVTDYMLQETFRARYP 199
NG + N + F F ++RD + D T +FV +L+ T L + F Y
Sbjct: 183 NGM-LINDKPVF---VGPFVRKQERDHSFDKTKFNNVFVKNLSESTTKEDLLKIF-GEYG 237
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
A V+I + G+++ +GF+ F + A+ E+NG + + +G A K
Sbjct: 238 DITSAVVMIG-MDGKSRCFGFINFENPDAASHAVQELNGKKINDKEWYVGRAQKKSEREM 296
Query: 260 SYQNS---QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AGK 311
+ + + D +++ NLD + D+ L ELFS +G++ K+ K
Sbjct: 297 ELKRRFEQSLKDAADKYQGLNLYLKNLDDSIGDDQLCELFSNFGKITSYKVMRDQNGLSK 356
Query: 312 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 354
GFV F+ R A +AL +NG + G+ + +++ + +++A
Sbjct: 357 GSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKA 399
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 82/201 (40%), Gaps = 27/201 (13%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L + L F G++ + V+ G+ +GFI F + A
Sbjct: 211 KFNNVFVKNLSESTTKEDLLKIFGEYGDITSA-VVMIGMDGKSRCFGFINFENPDAASHA 269
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRD--------------DTPDH----TIFVGDL 181
+Q NG + + E W A +K + D D +++ +L
Sbjct: 270 VQELNGKKINDKE------WYVGRAQKKSEREMELKRRFEQSLKDAADKYQGLNLYLKNL 323
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
+ D L E F + + KV+ D+ G +KG GFV F E +A+TEMNG
Sbjct: 324 DDSIGDDQLCELF-SNFGKITSYKVMRDQ-NGLSKGSGFVAFSTREEASQALTEMNGKMI 381
Query: 242 STRPMRIGPATNKKTVSASYQ 262
S +P+ + A K+ A Q
Sbjct: 382 SGKPLYVAFAQRKEDRKAMLQ 402
>gi|149608633|ref|XP_001515603.1| PREDICTED: polyadenylate-binding protein 4 [Ornithorhynchus
anatinus]
Length = 630
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 135/283 (47%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + RA+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR-- 312
A T V++ N + DE L+ELFS+YG+ + VK+ P+GK
Sbjct: 180 EAEL-------GAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPSGKSKG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV F A +A+ +NG + G+ + + + +QA+
Sbjct: 233 FGFVSFEKHEDANQAVEDMNGKDINGKMVFVGRAQKKVERQAE 275
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 136/289 (47%), Gaps = 23/289 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A+R +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + D+ D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGDDMDDERLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F ++Y T KV+ D +G++KG+GFV F + +A+ +MNG + + + +G A
Sbjct: 211 F-SKYGKTLSVKVMTDP-SGKSKGFGFVSFEKHEDANQAVEDMNGKDINGKMVFVGRAQK 268
Query: 254 KKTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA- 309
K A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 269 KVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE 328
Query: 310 ---GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 329 EGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A+ A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 33/221 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F+ G+ ++VKV+ + +G+ +G+GF+ F A +
Sbjct: 189 EFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDP-SGKSKGFGFVSFEKHEDANQA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + NG+ F G +K+ + +++ +
Sbjct: 248 VEDMNGKDI-NGKMVF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN---SQVAQSDDDPNNTTV 278
++P+ + A K+ A N ++A P NT +
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTII 398
>gi|410966840|ref|XP_003989935.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Felis catus]
Length = 660
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKVIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|348517413|ref|XP_003446228.1| PREDICTED: polyadenylate-binding protein 4 [Oreochromis niloticus]
Length = 627
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 140/283 (49%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVVKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + RA+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR-- 312
A A++ + T V++ N + DE L+E+F +YG+ + VK+ P+GK
Sbjct: 180 EAELG----AKAKE---FTNVYIKNFGDDMDDERLKEIFDKYGKTLSVKVMTDPSGKSRG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV + A +A+ +NGT+L G+ + + + +QA+
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGTELNGKTVFVGRAQKKMERQAE 275
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 135/285 (47%), Gaps = 21/285 (7%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A+R ++
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 158
Query: 144 NGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG + + + ++ + A GA K +++ + D+ D L+E F +
Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGDDMDDERLKEIF-DK 213
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
Y T KV+ D +G+++G+GFV + + +A+ EMNG + + + +G A K
Sbjct: 214 YGKTLSVKVMTDP-SGKSRGFGFVSYEKHEDANKAVEEMNGTELNGKTVFVGRAQKKMER 272
Query: 258 SASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA----G 310
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 273 QAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEEGRS 332
Query: 311 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL D+T+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A+ A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F G+ ++VKV+ + +G+ G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGDDMDDERLKEIFDKYGKTLSVKVMTDP-SGKSRGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NGT + NG+ F G +K+ + +++ +
Sbjct: 248 VEEMNGTEL-NGKTVF------VGRAQKKMERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|344287653|ref|XP_003415567.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Loxodonta
africana]
Length = 660
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKVIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|410966844|ref|XP_003989937.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Felis catus]
Length = 631
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 136/289 (47%), Gaps = 23/289 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQK 268
Query: 254 KKTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA- 309
K A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 269 KVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE 328
Query: 310 ---GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 329 DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKVIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|198386356|ref|NP_001094008.1| polyadenylate-binding protein 4 [Rattus norvegicus]
gi|183985833|gb|AAI66452.1| Pabpc4 protein [Rattus norvegicus]
Length = 644
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 134/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AGKRCGFVQ 317
T V++ N V DE+LRELFSQ+G+ + VK+ K GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G++I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAE 275
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A + +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAANKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLRELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRD-CSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A +A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAANKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRD-CSGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG M +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEM-SGKSIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|426215226|ref|XP_004001875.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Ovis aries]
Length = 660
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 136/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE+L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEITGKVIFVGRAQKKVERQAE 275
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG + + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-TGKVIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|402854027|ref|XP_003891682.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Papio anubis]
Length = 660
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|295669832|ref|XP_002795464.1| TIA1 cytotoxic granule-associated RNA binding protein
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226285398|gb|EEH40964.1| TIA1 cytotoxic granule-associated RNA binding protein
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 501
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 126/292 (43%), Gaps = 62/292 (21%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V +VK+I +K
Sbjct: 100 RALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKN----------------------- 136
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
R+NWA ++DT +H IFVGDL+ +V D +L + F A + S
Sbjct: 137 ------------EIRVNWAYQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 183
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D TGR++GYGFV F + S+ +A++ M+G + +R +R A K S S
Sbjct: 184 VSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 243
Query: 261 YQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLREL 295
Q + A QS D P TT +VGNL T L L
Sbjct: 244 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLVPL 303
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
F +G +V + A + FV+ A A+ L+G + G+ ++ SWG+
Sbjct: 304 FQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGK 355
>gi|395853072|ref|XP_003799044.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Otolemur
garnettii]
Length = 633
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 136/283 (48%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR-- 312
A T V++ N V DE L+ELFSQ+G+ + VK+ P+GK
Sbjct: 180 EAEL-------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKVIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|338721952|ref|XP_003364452.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Equus
caballus]
Length = 631
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 136/283 (48%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR-- 312
A T V++ N V DE L+ELFSQ+G+ + VK+ P+GK
Sbjct: 180 EAEL-------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKVIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|402854031|ref|XP_003891684.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Papio anubis]
Length = 631
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 136/283 (48%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR-- 312
A T V++ N V DE L+ELFSQ+G+ + VK+ P+GK
Sbjct: 180 EAEL-------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|351713677|gb|EHB16596.1| Polyadenylate-binding protein 4 [Heterocephalus glaber]
Length = 661
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKVIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|85097328|ref|XP_960425.1| polyadenylate-binding protein [Neurospora crassa OR74A]
gi|74696454|sp|Q7S6N6.1|PABP_NEUCR RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|28921916|gb|EAA31189.1| polyadenylate-binding protein [Neurospora crassa OR74A]
Length = 764
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 130/264 (49%), Gaps = 18/264 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++G+L + E L F+ G V +++V R+ T + GY ++ + + A E+ L+
Sbjct: 61 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEE 120
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N T + + R+ W+ ++ T IF+ +L A + + L +TF A + +
Sbjct: 121 LNYTLIKG--RPCRIMWSQRDPALRK--TGAGNIFIKNLDAAIDNKALHDTF-AAFGNIL 175
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KV D G +KGYGFV + + +A+ +NG+ + + + +G KK + ++
Sbjct: 176 SCKVAQDE-HGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFE 234
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AGKRCGFVQ 317
+ N T V+V N+++ VTDE RELF+++G++ + + GFV
Sbjct: 235 EMKA-------NFTNVYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQEGKSRGFGFVN 287
Query: 318 FADRSCAEEALRMLNGTQLGGQNI 341
F A +A+ LNG GQ++
Sbjct: 288 FTTHEAAAQAVDELNGKDFRGQDL 311
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 108/241 (44%), Gaps = 30/241 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G +++ KV +++ G +GYGF+ + + A + ++
Sbjct: 149 NIFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEH-GNSKGYGFVHYETDEAASQAIKH 207
Query: 143 FNG-------------TPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYM 189
NG P + + F A+F ++V ++ +VTD
Sbjct: 208 VNGMLLNEKKVYVGHHIPKKDRQSKFEEMKANF-----------TNVYVKNINNEVTDEE 256
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
+E F A++ + + D+ G+++G+GFV F +A+ E+NG + + +G
Sbjct: 257 FRELF-AKFGEVTSSSLARDQ-EGKSRGFGFVNFTTHEAAAQAVDELNGKDFRGQDLYVG 314
Query: 250 PATNKKTVSASYQNSQVAQSDDDPNN---TTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 306
A K + S A + N +++ NL V D+ LR +FS+YG + K
Sbjct: 315 RAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLGDDVDDDKLRAMFSEYGPITSAK 374
Query: 307 I 307
+
Sbjct: 375 V 375
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 88/241 (36%), Gaps = 68/241 (28%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+++ ++ + + FA GEV + + R+ Q G+ G+GF+ F + A + +
Sbjct: 242 NVYVKNINNEVTDEEFRELFAKFGEVTSSSLARD-QEGKSRGFGFVNFTTHEAAAQAVDE 300
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGDLAA 183
NG ++FR G +K+ + + +++ +L
Sbjct: 301 LNG-------KDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLGD 353
Query: 184 DVTDYMLQETFRARYPSTKGAKVVIDRLT------------------------------- 212
DV D L+ F P T AKV+ D L
Sbjct: 354 DVDDDKLRAMFSEYGPITS-AKVMRDSLIEGSEEKDEKDKENKKEGETKEEEQNEGSEKK 412
Query: 213 ---------GRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQN 263
G++KG+GFV F + + +A+TEMN +P+ + A K + +
Sbjct: 413 TEKKGDRKLGKSKGFGFVCFSNPDDATKAVTEMNQRMVDGKPLYVALAQRKDVRKSQLEA 472
Query: 264 S 264
S
Sbjct: 473 S 473
>gi|149023880|gb|EDL80377.1| rCG31475, isoform CRA_c [Rattus norvegicus]
Length = 630
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 134/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AGKRCGFVQ 317
T V++ N V DE+LRELFSQ+G+ + VK+ K GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G++I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAE 275
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A + +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAANKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLRELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRD-CSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A +A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAANKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRD-CSGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG M +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEM-SGKSIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|70947056|ref|XP_743180.1| polyadenylate-binding protein [Plasmodium chabaudi chabaudi]
gi|56522555|emb|CAH74716.1| polyadenylate-binding protein, putative [Plasmodium chabaudi
chabaudi]
Length = 629
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 141/281 (50%), Gaps = 21/281 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F G V++++V R+ T + GY ++ + + A AER L T
Sbjct: 17 SLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRDSVTRKSLGYAYVNYHNLADAERALDT 76
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N T + Q RL W+ ++ T + IFV +L + + L +TF + + +
Sbjct: 77 LNYTNIKG--QPARLMWSHRDPSLRKSGTGN--IFVKNLDKTIDNKALFDTF-SMFGNIL 131
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KV D G++K YGFV + DE A+ ++NG+ ++ + +G KK+ A+
Sbjct: 132 SCKVATDEF-GKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYVGHFI-KKSERAT-- 187
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA---GKRCGFVQFA 319
+D T ++V N VT+ HL+ELFS YG++ + + + ++ F+ ++
Sbjct: 188 --------NDTKFTNLYVKNFPDTVTEAHLKELFSPYGEITSMIVKSDNKNRKFCFINYS 239
Query: 320 DRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQ 360
D A A+ LNG ++ ++ ++ P ++A+ N+
Sbjct: 240 DADSARNAMENLNGKKI-TEDGKIDHNYDPKKEEAEKAANE 279
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 166 EKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGD 225
E R+ P +++ +L + D L+E F Y + AKV+ D ++KG+GFV FG
Sbjct: 392 ESRNKHPGVNLYIKNLDDSMDDQTLKELFEP-YGTITSAKVMKDD-KDQSKGFGFVCFGT 449
Query: 226 ESEQLRAMTEMNGVFCSTRPMRIGPA 251
E +A+TEM+ + +P+ +G A
Sbjct: 450 HEEANKAVTEMHLKIINGKPLYVGLA 475
>gi|320591142|gb|EFX03581.1| polyadenylate-binding protein [Grosmannia clavigera kw1407]
Length = 780
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 19/278 (6%)
Query: 70 VPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIE 129
P P +L++G+L + E L F+ G V +++V R+ T + GY ++
Sbjct: 47 TPSSAAAHPQASASLYVGELDESVTEAMLFELFSQIGPVASIRVCRDAVTRRSLGYAYVN 106
Query: 130 FISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYM 189
+ S A E+ L+ N T + N + R+ W+ ++ T IF+ +L A + +
Sbjct: 107 YNSTADGEKALEELNYTLIKN--RPCRIMWSQRDPALRK--TGQGNIFIKNLDAAIDNKA 162
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
L +TF A + + KV D G +KGYGFV + + +A+ +NG+ + + + +G
Sbjct: 163 LHDTF-AAFGNILSCKVAQDE-HGNSKGYGFVHYETDEAAQQAIKHVNGMLLNEKKVYVG 220
Query: 250 PATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 309
KK + ++ + N T +++ NL + VTD+ R+LF QYG + I
Sbjct: 221 HHIPKKDRQSKFEEMKA-------NYTNIYIKNLHADVTDDEFRKLFEQYGAVTSSTIAR 273
Query: 310 GKRC------GFVQFADRSCAEEALRMLNGTQLGGQNI 341
+ GF+ F A +A+ LN ++ GQ +
Sbjct: 274 DQETGKSRGFGFINFTTHESAAKAVEELNSREIHGQEL 311
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 110/238 (46%), Gaps = 25/238 (10%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L+ FA G +++ KV +++ G +GYGF+ + + A++ ++
Sbjct: 149 IFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEH-GNSKGYGFVHYETDEAAQQAIKHV 207
Query: 144 NGTPMPNGEQNFRLNWASFGAGE---KRDDTPDH--------TIFVGDLAADVTDYMLQE 192
NG LN G K+D I++ +L ADVTD ++
Sbjct: 208 NG---------MLLNEKKVYVGHHIPKKDRQSKFEEMKANYTNIYIKNLHADVTDDEFRK 258
Query: 193 TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F +Y + + + D+ TG+++G+GF+ F +A+ E+N + + +G A
Sbjct: 259 LFE-QYGAVTSSTIARDQETGKSRGFGFINFTTHESAAKAVEELNSREIHGQELYVGRAQ 317
Query: 253 NKKTVSASYQNSQVAQSDDDPNN---TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 307
K + S A + + +++ NLD V DE LRELF+ YG + K+
Sbjct: 318 KKHEREEELRKSYEAARQEKASKYVGVNLYIKNLDDEVDDEKLRELFAPYGPITSAKV 375
>gi|395853070|ref|XP_003799043.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Otolemur
garnettii]
Length = 646
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKVIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|452820609|gb|EME27649.1| poly(A) binding / translation initiation factor [Galdieria
sulphuraria]
Length = 784
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 136/284 (47%), Gaps = 28/284 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T+++GDL ++E L F+ G V +V+V R+ T + GY ++ F S AER L+T
Sbjct: 78 TIYVGDLHPEVNEANLFEVFSAIGPVASVRVCRDIVTRRSLGYAYVNFHSMDDAERALET 137
Query: 143 FNGTPMPNGEQN-FRLNWASFGAGEKRDDTPDHT----IFVGDLAADVTDYMLQETFRAR 197
N P RL W + RD T + +F+ +L + + L +TF
Sbjct: 138 MNFYACPQTRDKPMRLMW------KNRDPTIRKSGAGNVFIKNLDKAIDNKTLFDTFSV- 190
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KV D G + GYGFV F + + A+ ++NG+ + + + +G +++
Sbjct: 191 FGNILSCKVATDD-EGNSLGYGFVHFENPEDAETAINKVNGMLLNDKQVYVGYFKSRQER 249
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLD-SIVTDEHLRELFSQYGQLVHVKIPAG-----K 311
AS + T V+ NL S+ T+E +RELFS YG++ V +P K
Sbjct: 250 EASEETHIF---------TNVYTKNLIPSMCTEEKIRELFSLYGEITSVYVPVDENEVPK 300
Query: 312 RCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
FV FA CA +A+ LNG G+++ + + + ++A+
Sbjct: 301 GFAFVNFAKPECAAKAVEELNGRDFEGKSLYVGRAQKKAEREAE 344
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 16/196 (8%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
TI+VGDL +V + L E F A P +V D +T R+ GY +V F + RA+
Sbjct: 78 TIYVGDLHPEVNEANLFEVFSAIGP-VASVRVCRDIVTRRSLGYAYVNFHSMDDAERALE 136
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
MN C P T K + ++N N VF+ NLD + ++ L +
Sbjct: 137 TMNFYAC--------PQTRDKPMRLMWKNRDPTIRKSGAGN--VFIKNLDKAIDNKTLFD 186
Query: 295 LFSQYGQLVHVKIPAGKRC-----GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP 349
FS +G ++ K+ GFV F + AE A+ +NG L + + + + +S
Sbjct: 187 TFSVFGNILSCKVATDDEGNSLGYGFVHFENPEDAETAINKVNGMLLNDKQVYVGYFKSR 246
Query: 350 SNKQAQPDPNQWNAGY 365
++A + + + Y
Sbjct: 247 QEREASEETHIFTNVY 262
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 129/297 (43%), Gaps = 20/297 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV + + G GYGF+ F + AE +
Sbjct: 170 VFIKNLDKAIDNKTLFDTFSVFGNILSCKVATDDE-GNSLGYGFVHFENPEDAETAINKV 228
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADV-----TDYMLQETFRARY 198
NG + N +Q + F + ++R+ + + IF ++ T+ ++E F + Y
Sbjct: 229 NGMLL-NDKQVY---VGYFKSRQEREASEETHIFTNVYTKNLIPSMCTEEKIRELF-SLY 283
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
V +D KG+ FV F +A+ E+NG + + +G A K
Sbjct: 284 GEITSVYVPVDE-NEVPKGFAFVNFAKPECAAKAVEELNGRDFEGKSLYVGRAQKKAERE 342
Query: 259 ASYQ---NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AG 310
A + ++ A+ ++V NL + +E LR+ FS +G L ++
Sbjct: 343 AELRRKAENKRAEILKKYQGVNLYVRNLPDDMDEEGLRKEFSNFGTLTSCRVMRDDKGVS 402
Query: 311 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYG 367
+ GFV F+ A +A+ +NG +G + + + + +QAQ + + A G
Sbjct: 403 RGFGFVCFSTPEEATKAVTEMNGKMMGKKPLYVCLAQRKEIRQAQLEAQRIAAAAGG 459
>gi|344287651|ref|XP_003415566.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Loxodonta
africana]
Length = 644
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKVIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|395853068|ref|XP_003799042.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Otolemur
garnettii]
Length = 662
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKVIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|338721949|ref|XP_003364451.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Equus
caballus]
Length = 660
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKVIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|410966842|ref|XP_003989936.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Felis catus]
Length = 644
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKVIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|322693766|gb|EFY85615.1| TIA1 cytotoxic granule-associated RNA binding protein [Metarhizium
acridum CQMa 102]
Length = 444
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 129/304 (42%), Gaps = 63/304 (20%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L+ + E L F TG V VK+I +K
Sbjct: 84 RALYVGGLEQRVTEDVLRQIFETTGHVQNVKIIPDKN----------------------- 120
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
R+NWA ++DT H IFVGDL+ +V D +L + F A + +
Sbjct: 121 ------------EIRVNWAYQSNTSNKEDTSSHFHIFVGDLSNEVNDDILLQAFSA-FGT 167
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D TGRT+GYGFV F D S+ +A++ M+G + +R +R A K S +
Sbjct: 168 VSEARVMWDMKTGRTRGYGFVAFRDRSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 227
Query: 261 YQNSQVAQS------------------------DDDPN-NTTVFVGNLDSIVTDEHLREL 295
Q + A + PN TT +VGNL T + L
Sbjct: 228 QQQAMQAMGLTPTTPFGHHQFPAHGVGSYDVVLNQTPNWQTTCYVGNLTPYTTPNDVVPL 287
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS-NKQA 354
F +G +V + A + F++ A A+ +NG + G+ ++ SWG+ + N Q
Sbjct: 288 FQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWGKDKTPNAQG 347
Query: 355 QPDP 358
DP
Sbjct: 348 NFDP 351
>gi|332248413|ref|XP_003273358.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|355557859|gb|EHH14639.1| hypothetical protein EGK_00600 [Macaca mulatta]
gi|383411103|gb|AFH28765.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
gi|384941238|gb|AFI34224.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
Length = 660
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|73976763|ref|XP_857000.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Canis lupus
familiaris]
Length = 644
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKVIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|332248417|ref|XP_003273360.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|383411099|gb|AFH28763.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
gi|384941234|gb|AFI34222.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
Length = 631
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 136/283 (48%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR-- 312
A T V++ N V DE L+ELFSQ+G+ + VK+ P+GK
Sbjct: 180 EAEL-------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|149693775|ref|XP_001503500.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Equus
caballus]
Length = 644
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKVIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|139948570|ref|NP_001077193.1| polyadenylate-binding protein 4 [Bos taurus]
gi|134024563|gb|AAI34510.1| PABPC4 protein [Bos taurus]
gi|296488909|tpg|DAA31022.1| TPA: poly A binding protein, cytoplasmic 4 [Bos taurus]
Length = 645
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 136/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE+L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEITGKVIFVGRAQKKVERQAE 275
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG + + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-TGKVIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|47219550|emb|CAG09904.1| unnamed protein product [Tetraodon nigroviridis]
Length = 623
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 139/283 (49%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVVKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + RA+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR-- 312
A A++ + T V++ N + DE L+ELF +YG+ + VK+ P GK
Sbjct: 180 EAELG----AKAKE---FTNVYIKNFGDDMNDERLKELFDKYGKTLSVKVMTDPTGKSRG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GF+ + A +A+ +NGT+L G+ + + + +QA+
Sbjct: 233 FGFISYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKMERQAE 275
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 133/286 (46%), Gaps = 23/286 (8%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A+R ++
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 158
Query: 144 NGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
NG + N + F + A GA K +++ + D+ D L+E F
Sbjct: 159 NGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGDDMNDERLKELF-D 212
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+Y T KV+ D TG+++G+GF+ + + +A+ +MNG + + + +G A K
Sbjct: 213 KYGKTLSVKVMTDP-TGKSRGFGFISYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKME 271
Query: 257 VSASYQNSQVAQSDDDPNN---TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA---- 309
A + + + +++ NLD + DE LR+ FS +G + K+
Sbjct: 272 RQAELKRKFEMLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEEGR 331
Query: 310 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL D+T+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A+ A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 33/221 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + M++ L F G+ ++VKV+ + TG+ G+GFI + A +
Sbjct: 189 EFTNVYIKNFGDDMNDERLKELFDKYGKTLSVKVMTDP-TGKSRGFGFISYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NGT + NG+ F G +K+ + +++ +
Sbjct: 248 VEDMNGTEL-NGKTVF------VGRAQKKMERQAELKRKFEMLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN---SQVAQSDDDPNNTTV 278
++P+ + A K+ A N ++A P NT +
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRAMPANTII 398
>gi|332248415|ref|XP_003273359.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|383411101|gb|AFH28764.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
gi|384941236|gb|AFI34223.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
Length = 644
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|449440159|ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
gi|449521207|ref|XP_004167621.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
Length = 640
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 138/276 (50%), Gaps = 20/276 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + + L F+ + +V++ R+ TG+ YG++ FIS A ++
Sbjct: 15 SLYVGDLHPDVTDGQLFDAFSGFKSLASVRICRDSSTGRSLSYGYVNFISPQDATNAIEV 74
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + M NG + R+ W+ A ++ + +FV +L+ + LQE F+ ++ +
Sbjct: 75 MNHS-MLNG-RAIRVMWSRRDADARKSGIGN--VFVKNLSDSINSLGLQELFK-KFGNVL 129
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
+KV G++KGYGFV+F E A+ +NG + + +G K
Sbjct: 130 SSKVATSD-DGKSKGYGFVQFESEESANAAIESLNGFTVGDKQIYVGKFVRK-------- 180
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AGKRCGFVQ 317
S ++ D T ++V NLD + +EHL+E FS++G++ + I + GF+
Sbjct: 181 -SDRVLANPDIKYTNLYVKNLDPEIGEEHLQEKFSEFGKISSMIISRDENGVSRGFGFIN 239
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
F + A+ AL LNG+QLG + I ++ + + ++
Sbjct: 240 FENSDDAKRALETLNGSQLGSKVIYIARAQKKTERE 275
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 144/318 (45%), Gaps = 40/318 (12%)
Query: 54 AMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKV 113
MW+ + A + +G+ +++ +L ++ L F G V++ KV
Sbjct: 87 VMWSRRDADARKSGIG-------------NVFVKNLSDSINSLGLQELFKKFGNVLSSKV 133
Query: 114 IRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDD--- 170
G+ +GYGF++F S A +++ NG + G++ + G ++ D
Sbjct: 134 A-TSDDGKSKGYGFVQFESEESANAAIESLNGFTV--GDKQIYV-----GKFVRKSDRVL 185
Query: 171 -TPD---HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDR-LTGRTKGYGFVRFGD 225
PD ++V +L ++ + LQE F K + ++I R G ++G+GF+ F +
Sbjct: 186 ANPDIKYTNLYVKNLDPEIGEEHLQEKFS---EFGKISSMIISRDENGVSRGFGFINFEN 242
Query: 226 ESEQLRAMTEMNGVFCSTRPMRIGPA---TNKKTVSASYQNSQVAQSDDDPNNTTVFVGN 282
+ RA+ +NG ++ + I A T ++ V + + + + V+V N
Sbjct: 243 SDDAKRALETLNGSQLGSKVIYIARAQKKTEREEVLRRHYEEKCKEQVLKYKGSNVYVKN 302
Query: 283 LDSIVTDEHLRELFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQLG 337
+D VTDE LRE FSQ+G + K+ K GFV F++ A+ A+ L G
Sbjct: 303 IDDDVTDEELRERFSQFGTITSSKLMRDDKGINKGFGFVCFSNPDEAKRAVNTLQGCMFH 362
Query: 338 GQNIRLSWGRSPSNKQAQ 355
G+ + L+ + ++Q Q
Sbjct: 363 GKPLYLAIAQRKEDRQMQ 380
>gi|402854029|ref|XP_003891683.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Papio anubis]
Length = 644
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|426215228|ref|XP_004001876.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Ovis aries]
Length = 644
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 136/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE+L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEITGKVIFVGRAQKKVERQAE 275
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDENLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG + + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-TGKVIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|41388837|gb|AAH65540.1| PABPC4 protein [Homo sapiens]
Length = 631
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 136/283 (48%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + +L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKVLYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR-- 312
A T V++ N V DE L+ELFSQ+G+ + VK+ P GK
Sbjct: 180 EAEL-------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 135/289 (46%), Gaps = 23/289 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKVLYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Query: 254 KKTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA- 309
K A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 269 KVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE 328
Query: 310 ---GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 329 DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKVLYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|393216848|gb|EJD02338.1| polyadenylate binding protein [Fomitiporia mediterranea MF3/22]
Length = 701
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 151/320 (47%), Gaps = 34/320 (10%)
Query: 46 PQPQA-QPPA--MWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF 102
P PQ QPPA + + P A+G + P +L++G+L + E L F
Sbjct: 26 PAPQVVQPPAPVHASMPYSVPPASGASTPSA---------SLYVGELDSTVTEAMLFEIF 76
Query: 103 AHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF 162
G V +++V R+ T + GY ++ +++ A ER L+ N + + N + R+ W+
Sbjct: 77 NMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQLNYSLIKN--RACRIMWSQR 134
Query: 163 GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVR 222
++ T IF+ +L + L +TF A + + KV D GR++G+GFV
Sbjct: 135 DPALRK--TGQGNIFIKNLDEQIDHKALHDTF-AAFGNVLSCKVATDE-NGRSRGFGFVH 190
Query: 223 FGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY--QNSQVAQSDDDPNNTTVFV 280
+ A+ +NG+ + + + +G +KK A Q SQ T ++V
Sbjct: 191 YDTAEAADTAIKAVNGMLLNDKKVFVGHYISKKERQAHIDEQKSQF---------TNLYV 241
Query: 281 GNLDSIVTDEHLRELFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQ 335
NLD+ VTD+ ++F+++G++ + K GFV F D A+ A+ L+ T+
Sbjct: 242 KNLDTEVTDDEFNDMFAKFGEVTSAVVQKDEEGKSKGFGFVNFKDHESAQAAVDALHDTE 301
Query: 336 LGGQNIRLSWGRSPSNKQAQ 355
L G+ + ++ + + ++ +
Sbjct: 302 LNGKKLFVTRAQKKAEREEE 321
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 19/192 (9%)
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
TP +++VG+L + VT+ ML E F P +V D +T R+ GY +V + + ++
Sbjct: 53 TPSASLYVGELDSTVTEAMLFEIFNMIGP-VASIRVCRDAVTRRSLGYAYVNYLNAADGE 111
Query: 231 RAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDE 290
RA+ ++N R RI + + + Q + +F+ NLD + +
Sbjct: 112 RALEQLNYSLIKNRACRIMWSQRDPALRKTGQGN-------------IFIKNLDEQIDHK 158
Query: 291 HLRELFSQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 345
L + F+ +G ++ K+ + GFV + A+ A++ +NG L + + +
Sbjct: 159 ALHDTFAAFGNVLSCKVATDENGRSRGFGFVHYDTAEAADTAIKAVNGMLLNDKKVFVGH 218
Query: 346 GRSPSNKQAQPD 357
S +QA D
Sbjct: 219 YISKKERQAHID 230
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
Q + L++ +L + + N FA GEV + V++ + G+ +G+GF+ F A
Sbjct: 232 QKSQFTNLYVKNLDTEVTDDEFNDMFAKFGEVTSA-VVQKDEEGKSKGFGFVNFKDHESA 290
Query: 137 ERVLQTFNGTPMPNG--------------EQNFRLNWASFGAGEKRDDTPDHTIFVGDLA 182
+ + + T + NG E+ R ++ EK +++ +L
Sbjct: 291 QAAVDALHDTEL-NGKKLFVTRAQKKAEREEELRKSYEQ-AKMEKLSKYQGANLYIKNLE 348
Query: 183 ADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCS 242
D+ D L+ F + + K++ D G +KG+GFV + E +A+ EMN
Sbjct: 349 DDMDDDKLRAEFEP-FGTITSCKIMRDE-KGTSKGFGFVCYSSPEEATKAVAEMNNKMLG 406
Query: 243 TRPMRIGPATNKKTVSASYQNSQVAQSDD 271
++P+ + PA ++ V SQ+A ++
Sbjct: 407 SKPLYVSPA-QRREVRRQQLESQIAARNN 434
>gi|315052346|ref|XP_003175547.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
gi|311340862|gb|EFR00065.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
Length = 782
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 139/294 (47%), Gaps = 24/294 (8%)
Query: 61 AAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTG 120
AA +++G P Q +L++G+L + E L F+ G+V +++V R+ T
Sbjct: 40 AAGESSGTTAPATSQPHSA---SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTR 96
Query: 121 QIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGD 180
+ GY ++ + + A ER L+ N T + + R+ W+ ++ T +F+ +
Sbjct: 97 RSLGYAYVNYNNTADGERALEDLNYTLIKG--RPCRIMWSQRDPALRK--TGQGNVFIKN 152
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + + L +TF A + + KV D G +KGYGFV + A+ +NG+
Sbjct: 153 LDTAIDNKALHDTF-AAFGNILSCKVAQDEY-GNSKGYGFVHYETAEAATNAIKHVNGML 210
Query: 241 CSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 300
+ + + +G KK + ++ + N T ++V N++ VTDE R LF +YG
Sbjct: 211 LNEKKVFVGHHIAKKDRQSKFEEMKA-------NFTNIYVKNVEQDVTDEEFRSLFEKYG 263
Query: 301 QLVHVKIP----AGKR--CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
++ + GK GFV F+D A A+ LN +L GQ +L GR+
Sbjct: 264 EITSATLSRDNETGKSRGFGFVNFSDHEAASAAVEGLNEYELKGQ--KLYVGRA 315
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 108/231 (46%), Gaps = 9/231 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G +++ KV ++ + G +GYGF+ + + A ++
Sbjct: 147 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EYGNSKGYGFVHYETAEAATNAIKH 205
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH--TIFVGDLAADVTDYMLQETFRARYPS 200
NG + + + A K ++ + I+V ++ DVTD + F +Y
Sbjct: 206 VNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRSLFE-KYGE 264
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----KT 256
A + D TG+++G+GFV F D A+ +N + + +G A K +
Sbjct: 265 ITSATLSRDNETGKSRGFGFVNFSDHEAASAAVEGLNEYELKGQKLYVGRAQKKHEREEE 324
Query: 257 VSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 307
+ Y+ +++ ++ +++ NL + DE LRELFS YG + K+
Sbjct: 325 LRKQYEAARIEKASK-YQGVNLYIKNLSDDIDDEKLRELFSSYGNITSAKV 374
>gi|354485887|ref|XP_003505113.1| PREDICTED: polyadenylate-binding protein 4-like [Cricetulus
griseus]
Length = 685
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 136/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 34 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 93
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 94 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 148
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 149 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 205
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V D++L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 206 ------GAKAKEFTNVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 259
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 260 YEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAE 297
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 136/289 (47%), Gaps = 23/289 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 120 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 177
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 178 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDDNLKEL 232
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A
Sbjct: 233 F-SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQK 290
Query: 254 KKTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA- 309
K A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 291 KVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE 350
Query: 310 ---GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 351 DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 399
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 28/197 (14%)
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
R P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F +
Sbjct: 27 RGHYPMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPA 85
Query: 228 EQLRAMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGN 282
+ RA+ MN +P+RI P+ K V VF+ N
Sbjct: 86 DAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKN 127
Query: 283 LDSIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGG 338
LD + ++ L + FS +G ++ K+ K FV F + A++A+ +NG L
Sbjct: 128 LDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLND 187
Query: 339 QNIRLSWGRSPSNKQAQ 355
+ + + +S ++A+
Sbjct: 188 RKVFVGRFKSRKEREAE 204
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 211 EFTNVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 269
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG M +G+ F G +K+ + +++ +
Sbjct: 270 VEEMNGKEM-SGKAIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 322
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 323 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 379
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 380 VGSKPLYVALAQRKEERKAHLTN 402
>gi|164657987|ref|XP_001730119.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
gi|159104014|gb|EDP42905.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
Length = 664
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 134/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++G+L+ ++E L F G V +++V R+ T + GY ++ F++ +ER L+
Sbjct: 81 SLYVGELEPNVNEAILFEIFNMVGAVSSIRVCRDTVTRRSLGYAYVNFLNAEDSERALEQ 140
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ + R+ W+ G++R + IF+ +L + + L +TF A +
Sbjct: 141 LNYTPIRG--RPCRIMWSQRDPGQRRAGQGN--IFIKNLDEAIDNKALHDTF-AAFGKIL 195
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KV + + GYGFV + A+ +NG+ + + + +G +KK A +
Sbjct: 196 SCKVASNEHG--SLGYGFVHYESNDAAEAAIKHVNGMLLNDKKVYVGHHISKKDRQAKIE 253
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-----GKRCGFVQ 317
++ + T V+V NLD VT E +LF +YG++ I + GFV
Sbjct: 254 EARA-------HYTNVYVKNLDPAVTQEEFEKLFEKYGKITSAAIATDQEGKSRGFGFVN 306
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
F++ A +A+ LN T+ GQ + L + S ++ +
Sbjct: 307 FSEHEQAAKAVEELNDTEFHGQKLFLGRAQKKSEREEE 344
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 17/184 (9%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++ +L + + F G++ + I Q G+ G+GF+ F A + ++
Sbjct: 262 VYVKNLDPAVTQEEFEKLFEKYGKITSA-AIATDQEGKSRGFGFVNFSEHEQAAKAVEEL 320
Query: 144 NGTPM-------------PNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYML 190
N T E+ R + + EK +++ +L D D L
Sbjct: 321 NDTEFHGQKLFLGRAQKKSEREEELRRAYEA-AKNEKLSKYQGVNLYIKNLPEDFDDERL 379
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
QE F A + +T AKV + TG ++G+GFV + E +A+ EMNG RP+ +
Sbjct: 380 QEEF-APFGTTTSAKV-MRTPTGASRGFGFVCYSAPEEANKAVAEMNGKMIENRPLYVAL 437
Query: 251 ATNK 254
A K
Sbjct: 438 AQRK 441
>gi|50293737|ref|XP_449280.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690665|sp|Q6FKG4.1|PABP_CANGA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49528593|emb|CAG62254.1| unnamed protein product [Candida glabrata]
Length = 579
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 152/309 (49%), Gaps = 24/309 (7%)
Query: 58 TQAAAPQAAGVAVPPQQQGQPGEIRT------LWIGDLQYWMDETYLNTCFAHTGEVVAV 111
T+ A Q +++ +Q+G E ++ L++GDL + E +L F+ G V ++
Sbjct: 5 TEKTAEQLENLSLQDKQEGTNEENQSETVSASLYVGDLDPSVSEAHLYDIFSPIGAVSSI 64
Query: 112 KVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT 171
+V R+ T GY ++ F A+ ++ N TP+ + R+ W+ ++
Sbjct: 65 RVCRDAITKTSLGYAYVNFNDHDAAKTAIEKLNFTPIKG--KLCRIMWSQRDPSLRKKGA 122
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
+ IF+ +L D+ + L +TF + + +KV D TG++KG+G+V F ++
Sbjct: 123 GN--IFIKNLHPDIDNKALYDTFSV-FGNILSSKVATDE-TGKSKGFGYVHFEEDESASE 178
Query: 232 AMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEH 291
A+ +NG+ + + + +GP +KK + ++ + N T V++ N+++ TD+
Sbjct: 179 AIDALNGMLLNGQEIYVGPHLSKKERESKFEEMKA-------NFTNVYIKNINTETTDKE 231
Query: 292 LRELFSQYGQ---LVHVKIPAG--KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 346
EL +++G+ +V + P G K GFV F + A + + LN T+ GQ + ++
Sbjct: 232 FEELVAKFGKTDSVVLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRA 291
Query: 347 RSPSNKQAQ 355
+ +Q +
Sbjct: 292 QKKYERQQE 300
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 131/285 (45%), Gaps = 19/285 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV + +TG+ +G+G++ F A +
Sbjct: 125 IFIKNLHPDIDNKALYDTFSVFGNILSSKVATD-ETGKSKGFGYVHFEEDESASEAIDAL 183
Query: 144 NGTPMPNGEQNF---RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG + NG++ + L+ + + +++ ++ + TD +E A++
Sbjct: 184 NGMLL-NGQEIYVGPHLSKKERESKFEEMKANFTNVYIKNINTETTDKEFEELV-AKFGK 241
Query: 201 TKGAKVVIDRL-TGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----K 255
T VV++R G KG+GFV F + + ++ + E+N +P+ + A K +
Sbjct: 242 TDS--VVLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRAQKKYERQQ 299
Query: 256 TVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-----G 310
+ Y+ +++ + +F+ NLD + D+ L E F+ YG + K+
Sbjct: 300 ELKKQYEATRMEKMAK-YQGINLFIKNLDDSIDDKKLEEEFAPYGTITSAKVMTTENGKS 358
Query: 311 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ N + G+ + ++ + +++Q
Sbjct: 359 KGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQ 403
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 22/198 (11%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I ++ + A G+ +V V+ G+ +G+GF+ F++ A + ++
Sbjct: 218 VYIKNINTETTDKEFEELVAKFGKTDSV-VLERTPEGENKGFGFVNFVNHEDAVKCVEEL 276
Query: 144 NGTPMP-------------NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYML 190
N T +Q + + + EK +F+ +L + D L
Sbjct: 277 NNTEFKGQPLYVNRAQKKYERQQELKKQYEA-TRMEKMAKYQGINLFIKNLDDSIDDKKL 335
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+E F A Y + AKV+ G++KG+GFV F E +A+TE N + +P+ +
Sbjct: 336 EEEF-APYGTITSAKVMTTE-NGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAI 393
Query: 251 ATNKKTVSASYQNSQVAQ 268
A K + SQ+AQ
Sbjct: 394 AQRKDV-----RRSQLAQ 406
>gi|195573327|ref|XP_002104645.1| GD18328 [Drosophila simulans]
gi|194200572|gb|EDX14148.1| GD18328 [Drosophila simulans]
Length = 824
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 134/272 (49%), Gaps = 13/272 (4%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F+ G V + K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGN---DPYAFIEYSNYQAASTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N E+ ++NWA+ G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLFL--EKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----KT 256
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K +
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 257 VSASYQNSQVAQSDDDPNNTTVFVGNLD-SIVTDEHLRELFSQYGQLVHVKIPAGKRCGF 315
S +V + P NTTV+ G ++++D+ + + F Q+G + V++ K F
Sbjct: 181 PSKXXXXXEV-YNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSF 239
Query: 316 VQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
++F + A A+ + +++ G ++ WG+
Sbjct: 240 IKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGK 271
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRCGFVQFADRSCAEEA 327
D+ T++VGNLDS V+++ L LFS G + KI P F+++++ A A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAASTA 61
Query: 328 LRMLNGTQLGGQNIRLSWGRSPSNK 352
L +N + I+++W SP N+
Sbjct: 62 LTAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|336465951|gb|EGO54116.1| hypothetical protein NEUTE1DRAFT_87204 [Neurospora tetrasperma FGSC
2508]
gi|350287213|gb|EGZ68460.1| polyadenylate binding protein [Neurospora tetrasperma FGSC 2509]
Length = 764
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 130/264 (49%), Gaps = 18/264 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++G+L + E L F+ G V +++V R+ T + GY ++ + + A E+ L+
Sbjct: 61 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEE 120
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N T + + R+ W+ ++ T IF+ +L A + + L +TF A + +
Sbjct: 121 LNYTLIKG--RPCRIMWSQRDPALRK--TGAGNIFIKNLDAAIDNKALHDTF-AAFGNIL 175
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KV D G +KGYGFV + + +A+ +NG+ + + + +G KK + ++
Sbjct: 176 SCKVAQDE-HGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFE 234
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR-----CGFVQ 317
+ N T V+V N+++ VTDE RELF+++G++ + + GFV
Sbjct: 235 EMKA-------NFTNVYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQEGKTRGFGFVN 287
Query: 318 FADRSCAEEALRMLNGTQLGGQNI 341
F A +A+ LNG GQ++
Sbjct: 288 FTTHEAAAQAVDELNGKDFRGQDL 311
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 108/241 (44%), Gaps = 30/241 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G +++ KV +++ G +GYGF+ + + A + ++
Sbjct: 149 NIFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEH-GNSKGYGFVHYETDEAASQAIKH 207
Query: 143 FNG-------------TPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYM 189
NG P + + F A+F ++V ++ +VTD
Sbjct: 208 VNGMLLNEKKVYVGHHIPKKDRQSKFEEMKANF-----------TNVYVKNINNEVTDEE 256
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
+E F A++ + + D+ G+T+G+GFV F +A+ E+NG + + +G
Sbjct: 257 FRELF-AKFGEVTSSSLARDQ-EGKTRGFGFVNFTTHEAAAQAVDELNGKDFRGQDLYVG 314
Query: 250 PATNKKTVSASYQNSQVAQSDDDPNN---TTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 306
A K + S A + N +++ NL V D+ LR +FS+YG + K
Sbjct: 315 RAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLGDDVDDDKLRAMFSEYGPITSAK 374
Query: 307 I 307
+
Sbjct: 375 V 375
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 88/240 (36%), Gaps = 67/240 (27%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+++ ++ + + FA GEV + + R+ Q G+ G+GF+ F + A + +
Sbjct: 242 NVYVKNINNEVTDEEFRELFAKFGEVTSSSLARD-QEGKTRGFGFVNFTTHEAAAQAVDE 300
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGDLAA 183
NG ++FR G +K+ + + +++ +L
Sbjct: 301 LNG-------KDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLGD 353
Query: 184 DVTDYMLQETFRARYPSTKGAKVVIDRLT------------------------------- 212
DV D L+ F P T AKV+ D L
Sbjct: 354 DVDDDKLRAMFSEYGPITS-AKVMRDSLIEGSEEKDEKDKENKKEGEAEEEQKEGSEKKT 412
Query: 213 --------GRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNS 264
G++KG+GFV F + + +A+TEMN +P+ + A K + + S
Sbjct: 413 EKKGDRKLGKSKGFGFVCFSNPDDATKAVTEMNQRMVDGKPLYVALAQRKDVRKSQLEAS 472
>gi|327299218|ref|XP_003234302.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
gi|326463196|gb|EGD88649.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
Length = 781
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 141/302 (46%), Gaps = 24/302 (7%)
Query: 53 PAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
P+ A A + +G A P Q +L++G+L + E L F+ G+V +++
Sbjct: 32 PSTEAAPETAGEPSGTAAPATSQPHSA---SLYVGELDPSVTEAMLYELFSSIGQVASIR 88
Query: 113 VIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTP 172
V R+ T + GY ++ + + A ER L+ N T + + R+ W+ ++ T
Sbjct: 89 VCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKG--RPCRIMWSQRDPALRK--TG 144
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+F+ +L + + L +TF A + + KV D G +KGYGFV + A
Sbjct: 145 QGNVFIKNLDTAIDNKALHDTF-AAFGNILSCKVAQDEY-GNSKGYGFVHYETAEAATNA 202
Query: 233 MTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 292
+ +NG+ + + + +G KK + ++ + N T ++V N++ VTDE
Sbjct: 203 IKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKA-------NFTNIYVKNVEQDVTDEEF 255
Query: 293 RELFSQYGQLVHVKIP----AGKR--CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 346
R LF +YG++ + GK GFV F+D A A+ LN +L GQ +L G
Sbjct: 256 RGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQ--KLYVG 313
Query: 347 RS 348
R+
Sbjct: 314 RA 315
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 19/259 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G +++ KV ++ + G +GYGF+ + + A ++
Sbjct: 147 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EYGNSKGYGFVHYETAEAATNAIKH 205
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH--TIFVGDLAADVTDYMLQETFRARYPS 200
NG + + + A K ++ + I+V ++ DVTD + F +Y
Sbjct: 206 VNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFE-KYGE 264
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----KT 256
A + D TG+++G+GFV F D A+ +N + + +G A K +
Sbjct: 265 ITSATLSRDNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEE 324
Query: 257 VSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVK--------IP 308
+ Y+ +++ ++ +++ NL + DE LRELFS YG + K +P
Sbjct: 325 LRKQYEAARIEKASK-YQGVNLYIKNLSDDIDDEKLRELFSSYGNITSAKVMREAIVDVP 383
Query: 309 AGKRCGFVQFADRSCAEEA 327
A G + AD+ A+EA
Sbjct: 384 AETEKG--KEADKEKAKEA 400
>gi|346974495|gb|EGY17947.1| polyadenylate-binding protein [Verticillium dahliae VdLs.17]
Length = 759
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 135/270 (50%), Gaps = 18/270 (6%)
Query: 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
QP +L++G+L+ + E L F+H G V +++V R+ T + GY ++ + + +
Sbjct: 56 QPQASASLYVGELEPQVTEAMLFELFSHIGPVASIRVCRDAVTRRSLGYAYVNYNTTSDG 115
Query: 137 ERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
E+ L+ N T + NG + R+ W+ +++ + +F+ +L + + L +TF A
Sbjct: 116 EKALEELNYTVI-NG-RPCRIMWSQRDPALRKNGQGN--VFIKNLDVAIDNKALHDTF-A 170
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+ + KV D G +KGYGFV + + +A+ +NG+ + + + +G KK
Sbjct: 171 AFGNILSCKVAQDE-HGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGHHIPKKD 229
Query: 257 VSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP-----AGK 311
+ ++ + N T V+V N++S +D+ R+LF++YG++ + +
Sbjct: 230 RQSKFEEMKA-------NFTNVYVKNINSEASDDEFRDLFTKYGEVTSSSLARDQEGKSR 282
Query: 312 RCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
GFV F A +A+ LNG GQ++
Sbjct: 283 GFGFVNFTTHEAASQAVEELNGKDFRGQDL 312
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 107/241 (44%), Gaps = 30/241 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G +++ KV +++ G +GYGF+ + + A + ++
Sbjct: 150 NVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDEH-GNSKGYGFVHYETDEAAAQAIKH 208
Query: 143 FNG-------------TPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYM 189
NG P + + F A+F ++V ++ ++ +D
Sbjct: 209 VNGMLLNEKKVYVGHHIPKKDRQSKFEEMKANF-----------TNVYVKNINSEASDDE 257
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
++ F +Y + + D+ G+++G+GFV F +A+ E+NG + + +G
Sbjct: 258 FRDLF-TKYGEVTSSSLARDQ-EGKSRGFGFVNFTTHEAASQAVEELNGKDFRGQDLYVG 315
Query: 250 PATNKKTVSASYQNSQVAQSDDDPNN---TTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 306
A K + S A + N +++ NL V DE LR +FS++G + K
Sbjct: 316 RAQKKHEREEELRKSYEAARQEKANKYQGVNLYIKNLSDDVDDEKLRAMFSEFGPITSAK 375
Query: 307 I 307
+
Sbjct: 376 V 376
>gi|255555393|ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223542114|gb|EEF43658.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 644
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 137/259 (52%), Gaps = 20/259 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL+ + +++L F G+VV+V+V R+ T + GYG++ + S A R L
Sbjct: 25 SLYVGDLEANVTDSHLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSSPQDAARALDM 84
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ NG R+ ++ ++ + + IF+ +L + L +TF A + +
Sbjct: 85 LNFTPL-NGSP-IRIMYSHRDPSVRKSGSGN--IFIKNLDKGIDHKALHDTFSA-FGNIL 139
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KV D +G++KGYGFV+F +E +A+ ++NG+ + + + +GP K+ ++
Sbjct: 140 SCKVATDS-SGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGPFLRKQERESAID 198
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL---VHVKIPAGK-RC-GFVQ 317
++ NN V+V NL T+E L++ F +YG + V ++ GK +C GFV
Sbjct: 199 KTRF-------NN--VYVKNLSETTTEEDLKKAFGEYGTITSAVVMRDGDGKTKCFGFVN 249
Query: 318 FADRSCAEEALRMLNGTQL 336
F + A A+ LNG +
Sbjct: 250 FENADDAATAVEALNGKKF 268
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 142/286 (49%), Gaps = 21/286 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ F+ G +++ KV + +GQ +GYGF++F + A++ ++
Sbjct: 113 NIFIKNLDKGIDHKALHDTFSAFGNILSCKVATDS-SGQSKGYGFVQFDNEESAQKAIEK 171
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT----IFVGDLAADVTDYMLQETFRARY 198
NG + N +Q + F ++R+ D T ++V +L+ T+ L++ F Y
Sbjct: 172 LNGMLL-NDKQVY---VGPFLRKQERESAIDKTRFNNVYVKNLSETTTEEDLKKAF-GEY 226
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT-- 256
+ A V+ D G+TK +GFV F + + A+ +NG + +G A K
Sbjct: 227 GTITSAVVMRDG-DGKTKCFGFVNFENADDAATAVEALNGKKFDDKEWFVGKAQKKNERE 285
Query: 257 --VSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAG- 310
+ ++ S + ++ D +++ NLD + D+ L++LFS +G + K+ P G
Sbjct: 286 NELKVRFEQS-MKEAADKFQGANLYIKNLDDSIGDDRLKQLFSPFGTITSCKVMRDPNGI 344
Query: 311 -KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ GFV F+ A +AL +NG + + + ++ + +++A+
Sbjct: 345 SRGSGFVAFSTPEEASKALMEMNGKMVVSKPLYVALAQRKEDRRAR 390
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 7/86 (8%)
Query: 276 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP---AGKRC---GFVQFADRSCAEEALR 329
T+++VG+L++ VTD HL +LF+Q GQ+V V++ +R G+V ++ A AL
Sbjct: 24 TSLYVGDLEANVTDSHLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSSPQDAARALD 83
Query: 330 MLNGTQLGGQNIRLSWG-RSPSNKQA 354
MLN T L G IR+ + R PS +++
Sbjct: 84 MLNFTPLNGSPIRIMYSHRDPSVRKS 109
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 82/192 (42%), Gaps = 15/192 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+++ +L E L F G + + V+R+ G+ + +GF+ F + A ++
Sbjct: 204 NVYVKNLSETTTEEDLKKAFGEYGTITSAVVMRDGD-GKTKCFGFVNFENADDAATAVEA 262
Query: 143 FNGTPMPNGE--------QNFRLNWASFGAGEKRDDTPDH----TIFVGDLAADVTDYML 190
NG + E +N R N + + D +++ +L + D L
Sbjct: 263 LNGKKFDDKEWFVGKAQKKNERENELKVRFEQSMKEAADKFQGANLYIKNLDDSIGDDRL 322
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
++ F + + + KV+ D G ++G GFV F E +A+ EMNG ++P+ +
Sbjct: 323 KQLF-SPFGTITSCKVMRDP-NGISRGSGFVAFSTPEEASKALMEMNGKMVVSKPLYVAL 380
Query: 251 ATNKKTVSASYQ 262
A K+ A Q
Sbjct: 381 AQRKEDRRARLQ 392
>gi|389586343|dbj|GAB69072.1| polyadenylate-binding protein, partial [Plasmodium cynomolgi strain
B]
Length = 883
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 128/257 (49%), Gaps = 20/257 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F G V +++V R+ T + GY ++ + + A AER L T
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDT 76
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N T + Q RL W+ ++ + IFV +L + + L +TF + + +
Sbjct: 77 LNYTNIKG--QPARLMWSHRDPSLRKSGAGN--IFVKNLDKSIDNKALFDTF-SMFGNIL 131
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KV D G++K YGFV + DE A+ ++NG+ ++ + +G KK+ A+
Sbjct: 132 SCKVATDEF-GKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFI-KKSERAT-- 187
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA---GKRCGFVQFA 319
+D T ++V N VT+ HL+ELFS YG++ + + ++ F+ +A
Sbjct: 188 --------NDTKFTNLYVKNFPDSVTETHLKELFSPYGEITSMIVKTDNKNRKFCFINYA 239
Query: 320 DRSCAEEALRMLNGTQL 336
D A+ A+ LNG ++
Sbjct: 240 DSESAKNAMENLNGKKI 256
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 19/172 (11%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+++VGDL DVT+ +L E F +V D +T ++ GY +V + + ++ RA+
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNT-VGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALD 75
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
+N +P R+ S+++ + +S +FV NLD + ++ L +
Sbjct: 76 TLNYTNIKGQPARL---------MWSHRDPSLRKSGA----GNIFVKNLDKSIDNKALFD 122
Query: 295 LFSQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
FS +G ++ K+ K GFV + D A+EA+ +NG QLG +N+
Sbjct: 123 TFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNV 174
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 277 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKI----PAGKRCG--FVQFADRSCAEEALRM 330
+++VG+L+ VT+ L E+F+ G + +++ K G +V + + + AE AL
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDT 76
Query: 331 LNGTQLGGQNIRLSWG-RSPS 350
LN T + GQ RL W R PS
Sbjct: 77 LNYTNIKGQPARLMWSHRDPS 97
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+++ +L + D L+E F Y + AKV+ D ++KG+GFV F + E +A+T
Sbjct: 450 NLYIKNLDDAIDDQTLKELFEP-YGTITSAKVMRDD-KEQSKGFGFVCFALQEEANKAVT 507
Query: 235 EMNGVFCSTRPMRIGPA 251
EM+ + +P+ +G A
Sbjct: 508 EMHLKIINGKPLYVGLA 524
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 10/71 (14%)
Query: 276 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI-----PAGKRCGFVQF-----ADRSCAE 325
+++ NLD + D+ L+ELF YG + K+ K GFV F A+++ E
Sbjct: 449 VNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFALQEEANKAVTE 508
Query: 326 EALRMLNGTQL 336
L+++NG L
Sbjct: 509 MHLKIINGKPL 519
>gi|356564176|ref|XP_003550332.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 654
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 143/299 (47%), Gaps = 25/299 (8%)
Query: 43 MMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCF 102
M Q Q Q P AA P GVA P Q +L++GDL ++++ L F
Sbjct: 1 MAEIQVQHQSP----VSAAPPPNGGVANAPNNANQ-FVTTSLYVGDLDQNVNDSQLYDLF 55
Query: 103 AHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF 162
G+VV+V+V R+ T + GYG++ F + A R L N TP+ N ++ R+ ++
Sbjct: 56 NQVGQVVSVRVCRDLTTRRSLGYGYVNFSNPQDAARALDVLNFTPLNN--RSIRIMYSHR 113
Query: 163 GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVR 222
++ T + IF+ +L + L +TF + + K+ D +G +KGYGFV+
Sbjct: 114 DPSLRKSGTAN--IFIKNLDKAIDHKALHDTF-SSFGLILSCKIATDA-SGLSKGYGFVQ 169
Query: 223 FGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGN 282
F +E A+ ++NG+ + + + +G K Q+ + A S NN V+V N
Sbjct: 170 FDNEEAAQNAIDKLNGMLINDKQVYVGHFLRK-------QDRENALSKTKFNN--VYVKN 220
Query: 283 LDSIVTDEHLRELFSQYGQLVHVKI---PAGK-RC-GFVQFADRSCAEEALRMLNGTQL 336
L TDE L F +YG + I GK RC GFV F + A +A+ LNG +
Sbjct: 221 LSESTTDEELMINFGEYGTITSALIMRDADGKSRCFGFVNFENPDDAAKAVEGLNGKKF 279
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 135/286 (47%), Gaps = 21/286 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ F+ G +++ K I +G +GYGF++F + A+ +
Sbjct: 124 NIFIKNLDKAIDHKALHDTFSSFGLILSCK-IATDASGLSKGYGFVQFDNEEAAQNAIDK 182
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT----IFVGDLAADVTDYMLQETFRARY 198
NG + N +Q + F + R++ T ++V +L+ TD L F Y
Sbjct: 183 LNGM-LINDKQVY---VGHFLRKQDRENALSKTKFNNVYVKNLSESTTDEELMINF-GEY 237
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK---- 254
+ A ++ D G+++ +GFV F + + +A+ +NG + +G A K
Sbjct: 238 GTITSALIMRDA-DGKSRCFGFVNFENPDDAAKAVEGLNGKKFDDKEWYVGKAQKKSERE 296
Query: 255 KTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAG- 310
+ + ++ S +D P +++ NLD ++DE L+E+F+ YG + K+ P G
Sbjct: 297 QELKGRFEQSIKEAADKYPG-LNLYLKNLDDTISDEKLKEMFADYGTITSCKVMRDPTGI 355
Query: 311 -KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ GFV F+ A AL +NG G+ + ++ + ++A+
Sbjct: 356 SRGSGFVAFSTPEEATRALGEMNGKMFAGKPLYVALAQRKEERRAR 401
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 17/196 (8%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L + L F G + + ++R+ G+ +GF+ F + A +
Sbjct: 212 KFNNVYVKNLSESTTDEELMINFGEYGTITSALIMRDAD-GKSRCFGFVNFENPDDAAKA 270
Query: 140 LQTFNGTPMPNGE-------------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVT 186
++ NG + E Q + + E D P +++ +L ++
Sbjct: 271 VEGLNGKKFDDKEWYVGKAQKKSEREQELKGRFEQ-SIKEAADKYPGLNLYLKNLDDTIS 329
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
D L+E F A Y + KV+ D TG ++G GFV F E RA+ EMNG + +P+
Sbjct: 330 DEKLKEMF-ADYGTITSCKVMRDP-TGISRGSGFVAFSTPEEATRALGEMNGKMFAGKPL 387
Query: 247 RIGPATNKKTVSASYQ 262
+ A K+ A Q
Sbjct: 388 YVALAQRKEERRARLQ 403
>gi|118101731|ref|XP_417821.2| PREDICTED: polyadenylate-binding protein 4 [Gallus gallus]
Length = 630
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 133/278 (47%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + RA+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N + DE L+ELFS+YG+ + VK+ P GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
F A +A+ +NG + G+ + + + +QA+
Sbjct: 238 FEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAE 275
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A+R +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + D+ D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGDDMDDERLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
++Y T KV+ D TG++KG+GFV F + +A+ EMNG + + + +G A K
Sbjct: 212 -SKYGKTLSVKVMTDP-TGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKK 269
Query: 255 KTVSASYQN--SQVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 33/221 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F+ G+ ++VKV+ + TG+ +G+GF+ F A +
Sbjct: 189 EFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDP-TGKSKGFGFVSFEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + NG+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKDI-NGKMVF------VGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN---SQVAQSDDDPNNTTV 278
++P+ + A K+ A N ++A P NT +
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTII 398
>gi|449268618|gb|EMC79472.1| Polyadenylate-binding protein 4 [Columba livia]
Length = 630
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 133/278 (47%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + RA+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N + DE L+ELFS+YG+ + VK+ P GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
F A +A+ +NG + G+ + + + +QA+
Sbjct: 238 FEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAE 275
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A+R +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + D+ D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGDDMDDERLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
++Y T KV+ D TG++KG+GFV F + +A+ EMNG + + + +G A K
Sbjct: 212 -SKYGKTLSVKVMTDP-TGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERLSRYQGVNLYIKNLDDTIDDEKLRKEFSPFGAITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A+ A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 33/221 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F+ G+ ++VKV+ + TG+ +G+GF+ F A +
Sbjct: 189 EFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDP-TGKSKGFGFVSFEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + NG+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKDI-NGKMVF------VGRAQKKVERQAELKRKFEQLKQERLSRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + + AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGAITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN---SQVAQSDDDPNNTTV 278
++P+ + A K+ A N ++A P NT +
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTII 398
>gi|47228429|emb|CAG05249.1| unnamed protein product [Tetraodon nigroviridis]
Length = 411
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 134/274 (48%), Gaps = 12/274 (4%)
Query: 85 WIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144
++G+L + E + F G + K+I + T + Y F+EF A + N
Sbjct: 1 YVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIAAMN 58
Query: 145 GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGA 204
G + E ++NWA+ +K+D + +FVGDL+ ++T ++ F +
Sbjct: 59 GRKILGKE--VKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAF-GPFGKISDC 115
Query: 205 KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNS 264
+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K + + +
Sbjct: 116 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNETT 175
Query: 265 QVAQSDDD-------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 317
Q D P+N TV+ G + + +T++ +R+ FS +G ++ +++ K FV+
Sbjct: 176 NTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGHIMEIRVFPDKGYSFVR 235
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN 351
F A A+ +NGT + G ++ WG+ ++
Sbjct: 236 FNSHEAAAHAIVSVNGTTIEGYVVKCYWGKETTD 269
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 27/186 (14%)
Query: 71 PPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEF 130
P Q+ +++GDL + + F G++ +V+++ TG+ +GYGF+ F
Sbjct: 75 PTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSF 134
Query: 131 ISRAGAERVLQTFNGTPMPNGEQNFRLNWA------------------SFGAGEKRDDTP 172
++ AE +Q G + G + R NWA SF +
Sbjct: 135 FNKWDAENAIQQMGGQWL--GGRQIRTNWATRKPAPKTTNETTNTKQLSFDEVVNQSSPS 192
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+ T++ G + +T+ ++++TF + + +V D KGY FVRF A
Sbjct: 193 NCTVYCGGVTTGLTEQIMRQTF-SPFGHIMEIRVFPD------KGYSFVRFNSHEAAAHA 245
Query: 233 MTEMNG 238
+ +NG
Sbjct: 246 IVSVNG 251
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 279 FVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAEEALRMLNG 333
+VGNL VT+ + ELF Q G K+ AG C FV+F + A + +NG
Sbjct: 1 YVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYC-FVEFYEHRHATATIAAMNG 59
Query: 334 TQLGGQNIRLSWGRSPSNKQ 353
++ G+ ++++W +P++++
Sbjct: 60 RKILGKEVKVNWATTPTSQK 79
>gi|410263252|gb|JAA19592.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 135/283 (47%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR-- 312
A T V++ N V DE L+ELFSQ+G+ + VK+ P GK
Sbjct: 180 EAEL-------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|448097114|ref|XP_004198591.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
gi|359380013|emb|CCE82254.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
Length = 655
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 125/247 (50%), Gaps = 45/247 (18%)
Query: 42 MMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTC 101
M + P+P P + + AAA + G P Q P RTLW+GDL W+DET +
Sbjct: 93 MSVLPEP---PLSTKESSAAATKQQG---PLGHQENP---RTLWMGDLDPWLDETAIADL 143
Query: 102 FAHT-GEVVAVKVIRNKQTG--------QIEGYGFIEFISRAGAERVLQTFNGTPMP--- 149
+ + + V VK+IR + GY F+EF + A+ L + NG P+P
Sbjct: 144 WYNVLKKRVNVKLIRPRSHKTDFPYHGVSHLGYCFVEFDNLYDAQLAL-SLNGKPLPQSA 202
Query: 150 ------------NGEQNFRLNWASFGAGEKRD----DTPDHTIFVGDLAADVTDYMLQET 193
N ++ FRLNWA+ G D TP+ ++FVGDL+A T+ L
Sbjct: 203 MPSQKVRSRNQDNQKKYFRLNWAN---GATLDAPIIHTPEFSLFVGDLSASTTEAHLLAF 259
Query: 194 FRARYP-STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA- 251
F+ +YP S K +V+ D ++G+++ +GFVRF DE + +A+ EM G + R +R+ A
Sbjct: 260 FQNKYPESVKTVRVITDPVSGKSRCFGFVRFSDEHARSKALVEMQGTWFGGRQLRVALAS 319
Query: 252 --TNKKT 256
TN KT
Sbjct: 320 AKTNAKT 326
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 119/273 (43%), Gaps = 14/273 (5%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHT--GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+L++GDL E +L F + V V+VI + +G+ +GF+ F + L
Sbjct: 241 SLFVGDLSASTTEAHLLAFFQNKYPESVKTVRVITDPVSGKSRCFGFVRFSDEHARSKAL 300
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
GT G + R+ AS K +T F + + Q F+A P
Sbjct: 301 VEMQGTWF--GGRQLRVALASAKTNAKTGNTNGSPGFY--------NVLPQHFFQA--PG 348
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
G ++ + ++ S A+ + S P I + +S +
Sbjct: 349 GLPLATSPFGYYGNSQLHPQSQYPALSSSSEALNSVRHHGHSVIPDSISSYNGTEGLSNN 408
Query: 261 YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFAD 320
Q DP NTTVFVG L + V D+ L LF +G + VKIP GK CGF++++
Sbjct: 409 LYGIHHGQPFADPKNTTVFVGGLSAEVNDQTLFALFKPFGIIQQVKIPPGKNCGFIKYSK 468
Query: 321 RSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
R AE+A+ + G +GG +RLSWG+ +N +
Sbjct: 469 RQEAEDAIASMQGFIIGGNRVRLSWGKVSTNNK 501
>gi|41152034|ref|NP_958453.1| polyadenylate-binding protein 4 [Danio rerio]
gi|31419252|gb|AAH53126.1| Poly(A) binding protein, cytoplasmic 4 (inducible form) [Danio
rerio]
Length = 637
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 135/283 (47%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 13 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 72
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 73 MNFDVVKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 122
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + RA+ +MNG+ + R + +G ++K
Sbjct: 123 FGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 180
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR-- 312
A T V++ N + D+ L+ELF +YG+ + VK+ P GK
Sbjct: 181 EAEM-------GAKAKEFTNVYIKNFGDDMDDQRLKELFDKYGKTLSVKVMTDPTGKSRG 233
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV + A +A+ +NGT+L G+ + + + +QA+
Sbjct: 234 FGFVSYEKHEDANKAVEEMNGTELNGKTVFVGRAQKKMERQAE 276
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 135/285 (47%), Gaps = 21/285 (7%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A+R ++
Sbjct: 102 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 159
Query: 144 NGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG + + + ++ + A GA K +++ + D+ D L+E F +
Sbjct: 160 NGMLLNDRKVFVGRFKSRKEREAEMGAKAKEFTN----VYIKNFGDDMDDQRLKELF-DK 214
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
Y T KV+ D TG+++G+GFV + + +A+ EMNG + + + +G A K
Sbjct: 215 YGKTLSVKVMTDP-TGKSRGFGFVSYEKHEDANKAVEEMNGTELNGKTVFVGRAQKKMER 273
Query: 258 SASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA----G 310
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 274 QAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEEGRS 333
Query: 311 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 334 KGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 378
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL D+T+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 10 PMASLYVGDLHPDITEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 68
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 69 ALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 110
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A+ A+ +NG L + +
Sbjct: 111 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 170
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 171 VGRFKSRKEREAE 183
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F G+ ++VKV+ + TG+ G+GF+ + A +
Sbjct: 190 EFTNVYIKNFGDDMDDQRLKELFDKYGKTLSVKVMTDP-TGKSRGFGFVSYEKHEDANKA 248
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NGT + NG+ F G +K+ + +++ +
Sbjct: 249 VEEMNGTEL-NGKTVF------VGRAQKKMERQAELKRKFEQLKQERISRYQGVNLYIKN 301
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 302 LDDTIDDEKLRKEF-SPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRI 358
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 359 VGSKPLYVALAQRKEERKAHLTN 381
>gi|410956870|ref|XP_003985059.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Felis catus]
Length = 486
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 133/278 (47%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V+++++ R+ T + GY ++ F+ A A+R L T
Sbjct: 110 SLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQRALDT 169
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + RL W+ A ++ + +F+ +L + + L E F A +
Sbjct: 170 MNFDTIKG--KPIRLMWSQRDAYLRKSGIGN--VFIKNLDRSIDNKTLYEHFSA-FGKIL 224
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
+KV+ D R GY FV F ++ RA+ EMNG + +G N+K A +
Sbjct: 225 SSKVMSDDQGSR--GYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKNRKDREAELR 282
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-----GKRCGFVQ 317
N T V++ N + DE L+E+FS+YG+ + VK+ K GFV
Sbjct: 283 NKA-------NEFTNVYIKNFGDDMDDERLKEVFSKYGKTLSVKVMTDSSGKSKGFGFVS 335
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
F A++A+ +NG + GQ + + + S +QA+
Sbjct: 336 FDSHEAAKKAVEEMNGKDINGQLLFVGRAQKKSERQAE 373
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 146/313 (46%), Gaps = 34/313 (10%)
Query: 55 MWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI 114
MW+ + A + +G+ ++I +L +D L F+ G++++ KV+
Sbjct: 183 MWSQRDAYLRKSGIG-------------NVFIKNLDRSIDNKTLYEHFSAFGKILSSKVM 229
Query: 115 RNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG-----AGEKRD 169
+ Q + GY F+ F ++ A+R ++ NG + ++ RL F E R+
Sbjct: 230 SDDQGSR--GYAFVHFQNQIAADRAIEEMNGALL----KDCRLFVGRFKNRKDREAELRN 283
Query: 170 DTPDHT-IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
+ T +++ + D+ D L+E F ++Y T KV+ D +G++KG+GFV F
Sbjct: 284 KANEFTNVYIKNFGDDMDDERLKEVF-SKYGKTLSVKVMTDS-SGKSKGFGFVSFDSHEA 341
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQN--SQVAQSD-DDPNNTTVFVGNLDS 285
+A+ EMNG + + + +G A K A + Q+ Q +++ NLD
Sbjct: 342 AKKAVEEMNGKDINGQLLFVGRAQKKSERQAELKQVFEQLKQERFRRCQGMKLYIKNLDD 401
Query: 286 IVTDEHLRELFSQYGQLVHVKI--PAGKRCGF--VQFADRSCAEEALRMLNGTQLGGQNI 341
+ DE L FS +G + VKI G+ GF + F+ A +A+ +NG LG + +
Sbjct: 402 TIDDEKLWREFSSFGSISRVKIMREEGRSKGFGLICFSSPEEATKAMAEMNGRILGSKPL 461
Query: 342 RLSWGRSPSNKQA 354
++ + P + A
Sbjct: 462 YIALAQKPXERNA 474
>gi|358334962|dbj|GAA31742.2| polyadenylate-binding protein, partial [Clonorchis sinensis]
Length = 738
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 139/286 (48%), Gaps = 36/286 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL E L + F+ G V++ ++ R+ T GYG++ F AER L+
Sbjct: 2 SLYVGDLHPLATEALLYSKFSEIGTVLSARICRDLATRNSLGYGYVNFEEPKDAERALEN 61
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + IF+ +L + L +TF +
Sbjct: 62 LNYESFMGRPI-------RIMWSQRDPSLRKSGKGN--IFIKNLDKTIDQKQLYDTF-SF 111
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG---PATNK 254
K+ +D G +KGYGFV F E RA+ ++NG+ + R + +G P++++
Sbjct: 112 IGKILSCKIAMDE-HGNSKGYGFVHFEKEECAERAIEKINGMMINDRVVYVGKFIPSSDR 170
Query: 255 KTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHV---KIPAGK 311
K+ S + NN ++V N TDE LR++FS++G++ K P GK
Sbjct: 171 KSASGKLRF----------NN--IYVKNFPPDTTDEKLRDMFSEFGEIKSCCVEKNPEGK 218
Query: 312 R--CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV F D AE+A+R+++G ++ G+ + S + +Q +
Sbjct: 219 SKGFGFVCFHDPDHAEQAVRVMHGKEINGRALYASRAQRKEERQEE 264
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 127/286 (44%), Gaps = 22/286 (7%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D+ L F+ G++++ K+ ++ G +GYGF+ F AER ++
Sbjct: 91 IFIKNLDKTIDQKQLYDTFSFIGKILSCKIAMDEH-GNSKGYGFVHFEKEECAERAIEKI 149
Query: 144 NGTPMPNGEQNFRLNWA-SFGAGEKRDDTPD----HTIFVGDLAADVTDYMLQETFRARY 198
NG + N R+ + F R + I+V + D TD L++ F + +
Sbjct: 150 NGMMI-----NDRVVYVGKFIPSSDRKSASGKLRFNNIYVKNFPPDTTDEKLRDMF-SEF 203
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
K V G++KG+GFV F D +A+ M+G + R + A K+
Sbjct: 204 GEIKSC-CVEKNPEGKSKGFGFVCFHDPDHAEQAVRVMHGKEINGRALYASRAQRKEERQ 262
Query: 259 ASYQNSQVAQSDDDPNN----TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA----- 309
+ Q + + ++V NLD + DE L+E FS YG + K+
Sbjct: 263 EELKQRLEKQRAERLSKYVPGVNLYVKNLDDNIDDERLKEAFSHYGPITSAKVMTDANGR 322
Query: 310 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F A A+ +N T +G + + ++ + +++A+
Sbjct: 323 SKGFGFVCFTQPEQAARAVTEMNATLVGSKPLYVALAQRKEDRRAK 368
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 276 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC------GFVQFADRSCAEEALR 329
T+++VG+L + T+ L FS+ G ++ +I G+V F + AE AL
Sbjct: 1 TSLYVGDLHPLATEALLYSKFSEIGTVLSARICRDLATRNSLGYGYVNFEEPKDAERALE 60
Query: 330 MLNGTQLGGQNIRLSWG-RSPSNKQA 354
LN G+ IR+ W R PS +++
Sbjct: 61 NLNYESFMGRPIRIMWSQRDPSLRKS 86
>gi|432937502|ref|XP_004082431.1| PREDICTED: polyadenylate-binding protein 4-like [Oryzias latipes]
Length = 629
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 139/283 (49%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVVKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + RA+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR-- 312
A A++ + T V++ N + DE L+E+F +YG+ + VK+ +GK
Sbjct: 180 EAELG----AKAKE---FTNVYIKNFGDEMEDEQLKEMFEKYGKTLSVKVMTDSSGKSRG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV F A +A+ +NGT+L G+ + + + +QA+
Sbjct: 233 FGFVSFEKHEDANKAVEEINGTELNGKTVFVGRAQKKMERQAE 275
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 134/285 (47%), Gaps = 21/285 (7%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A+R ++
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 158
Query: 144 NGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG + + + ++ + A GA K +++ + ++ D L+E F +
Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGDEMEDEQLKEMFE-K 213
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
Y T KV+ D +G+++G+GFV F + +A+ E+NG + + + +G A K
Sbjct: 214 YGKTLSVKVMTDS-SGKSRGFGFVSFEKHEDANKAVEEINGTELNGKTVFVGRAQKKMER 272
Query: 258 SASYQNSQVAQSDDDPNN---TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA----G 310
A + + + +++ NLD + DE LR+ FS +G + K+
Sbjct: 273 QAELKRKFELLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 311 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL D+T+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A+ A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + M++ L F G+ ++VKV+ + +G+ G+GF+ F A +
Sbjct: 189 EFTNVYIKNFGDEMEDEQLKEMFEKYGKTLSVKVMTD-SSGKSRGFGFVSFEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NGT + NG+ F G +K+ + +++ +
Sbjct: 248 VEEINGTEL-NGKTVF------VGRAQKKMERQAELKRKFELLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|410083501|ref|XP_003959328.1| hypothetical protein KAFR_0J01260 [Kazachstania africana CBS 2517]
gi|372465919|emb|CCF60193.1| hypothetical protein KAFR_0J01260 [Kazachstania africana CBS 2517]
Length = 365
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 142/333 (42%), Gaps = 45/333 (13%)
Query: 58 TQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK 117
++ P + ++ G+ + L+IG+L ++E L F G++V VKV+ +K
Sbjct: 7 SETVVPVENVIPASAKEGGRETSDKVLYIGNLDKSINEDALKQYFQVAGQIVDVKVMVDK 66
Query: 118 QTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIF 177
+ + Y FIE+ + A LQT NG + N +N ++NWA F + +D +F
Sbjct: 67 KNNHV-NYAFIEYSTNHDANVALQTLNGIQIEN--KNIKINWA-FQSQTNLNDDTSFNLF 122
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
+GDL +V D L F++ P A V+ D T R++GYGFV F AM +M
Sbjct: 123 IGDLNVNVDDTTLANAFKS-CPGFLQAHVMWDMQTSRSRGYGFVSFDTHENAQAAMDQMQ 181
Query: 238 GVFCSTRPMRIGPATNK----------------------KTVSASYQNSQVA-------- 267
G + R +RI AT + + + QN
Sbjct: 182 GHEINGRAIRINWATKRENMNNNSNNNTNNNNNNNQVRNRMMMEGQQNMPPPPPPMGSLP 241
Query: 268 ----QSDDD------PNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQ 317
Q+ +D P TT ++GN+ T+ L L +G ++ K C F++
Sbjct: 242 PVNPQAVEDMIRRAPPRVTTAYIGNIPHFATEPDLIPLLQNFGFILDFTHYPEKGCCFIK 301
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPS 350
+ A + L+ Q G+N+R WG+ S
Sbjct: 302 YDTHEQAAVCIVALSNFQFQGRNLRTGWGKERS 334
>gi|70990636|ref|XP_750167.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|74669855|sp|Q4WK03.1|PABP_ASPFU RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|66847799|gb|EAL88129.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|159130644|gb|EDP55757.1| polyadenylate-binding protein [Aspergillus fumigatus A1163]
Length = 753
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 152/327 (46%), Gaps = 28/327 (8%)
Query: 53 PAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVK 112
P + A ++A+P A P +L++G+L + E L F+ G+V +++
Sbjct: 30 PEVTAVESASPSTTPSASQPHSA-------SLYVGELDPSVTEAMLYELFSSIGQVASIR 82
Query: 113 VIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTP 172
V R+ T + GY ++ + + A ER L+ N T + + R+ W+ ++ T
Sbjct: 83 VCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKG--KPCRIMWSQRDPALRK--TG 138
Query: 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232
+F+ +L A + + L +TF A + + KV D G +KGYGFV + A
Sbjct: 139 QGNVFIKNLDAAIDNKALHDTF-AAFGNILSCKVAQDEF-GNSKGYGFVHYETAEAANNA 196
Query: 233 MTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHL 292
+ +NG+ + + + +G +KK + ++ + N T V++ N+D VTDE
Sbjct: 197 IKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKA-------NFTNVYIKNIDQEVTDEEF 249
Query: 293 RELFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
R++F ++G++ + + GFV F+ A+ A+ +N ++ GQ +L GR
Sbjct: 250 RKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQ--KLYVGR 307
Query: 348 SPSNKQAQPD-PNQWNAGYYGYAQGYE 373
+ + + + Q+ A A Y+
Sbjct: 308 AQKKHEREEELRKQYEAARLEKASKYQ 334
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 110/230 (47%), Gaps = 10/230 (4%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L+ FA G +++ KV ++ + G +GYGF+ + + A ++
Sbjct: 142 VFIKNLDAAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHV 200
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDH--TIFVGDLAADVTDYMLQETFRARYPST 201
NG + + + + + K ++ + +++ ++ +VTD ++ F ++
Sbjct: 201 NGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFE-KFGEI 259
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----KTV 257
A + D+ G+++G+GFV F A+ EMN + + +G A K + +
Sbjct: 260 TSATLSRDQ-EGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEEL 318
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 307
Y+ +++ ++ ++V NL V DE LRELFS +G + K+
Sbjct: 319 RKQYEAARLEKASK-YQGVNLYVKNLTDDVDDEKLRELFSPFGTITSAKV 367
>gi|260943169|ref|XP_002615883.1| hypothetical protein CLUG_04765 [Clavispora lusitaniae ATCC 42720]
gi|238851173|gb|EEQ40637.1| hypothetical protein CLUG_04765 [Clavispora lusitaniae ATCC 42720]
Length = 385
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 107/188 (56%), Gaps = 7/188 (3%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+ L++G L ++E LN F+ +G V +VK++ N + Q Y F+EF+ AGA LQ
Sbjct: 44 KVLYVGGLPKSINEDALNEKFSASGPVFSVKIL-NDKNKQGFNYAFVEFVDEAGAAAALQ 102
Query: 142 TFNGTPMPNG--EQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYP 199
FNG+ N + N+ ++F A + DD P + IFVGDL+ +V D L + F A +
Sbjct: 103 EFNGSSFENSMLKINYAYQSSTFNATQNSDD-PTYNIFVGDLSPEVDDESLHKFFSA-FE 160
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS- 258
S K A V+ D T R++GYGFV F + ++ A++ MNG + R +R A++K+ S
Sbjct: 161 SLKQAHVMWDMQTSRSRGYGFVTFANLADAETALSTMNGKVLNGRAIRCNWASHKQQNSR 220
Query: 259 -ASYQNSQ 265
A QN+Q
Sbjct: 221 GAPRQNNQ 228
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
++VG L + + L E F A P K++ D+ + Y FV F DE+ A+
Sbjct: 45 VLYVGGLPKSINEDALNEKFSASGP-VFSVKILNDK-NKQGFNYAFVEFVDEAGAAAALQ 102
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
E NG ++I A T +A+ Q+ DDP +FVG+L V DE L +
Sbjct: 103 EFNGSSFENSMLKINYAYQSSTFNAT-------QNSDDPT-YNIFVGDLSPEVDDESLHK 154
Query: 295 LFSQYGQL--VHV----KIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG 346
FS + L HV + + GFV FA+ + AE AL +NG L G+ IR +W
Sbjct: 155 FFSAFESLKQAHVMWDMQTSRSRGYGFVTFANLADAETALSTMNGKVLNGRAIRCNWA 212
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 276 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQ 335
TTV++GN+ L L +G +V K K C FV++ A A+ L+G
Sbjct: 300 TTVYLGNIAHFTQQNDLIPLLQNFGYIVDFKFHPEKGCAFVKYDTHERAALAIVQLSGFN 359
Query: 336 LGGQNIRLSWGRS 348
+ G+ ++ WG+S
Sbjct: 360 VNGRQLKCGWGKS 372
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 22/96 (22%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+++GDL +D+ L+ F+ + V+ + QT + GYGF+ F + A AE L T
Sbjct: 137 NIFVGDLSPEVDDESLHKFFSAFESLKQAHVMWDMQTSRSRGYGFVTFANLADAETALST 196
Query: 143 FNG----------------------TPMPNGEQNFR 156
NG P N ++ FR
Sbjct: 197 MNGKVLNGRAIRCNWASHKQQNSRGAPRQNNQRQFR 232
>gi|444706907|gb|ELW48224.1| Polyadenylate-binding protein 4 [Tupaia chinensis]
Length = 692
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 138/278 (49%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
A++ + T V++ N V DE L+ELFSQ+G+ + VK+ P GK GFV
Sbjct: 185 ----AKAKE---FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPTGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 136/289 (47%), Gaps = 23/289 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D TG++KG+GFV + + +A+ EMNG S + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-TGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQK 268
Query: 254 KKTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA- 309
K A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 269 KVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE 328
Query: 310 ---GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 329 DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ TG+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-TGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKVIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|410263250|gb|JAA19591.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 644
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 134/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|208431836|ref|NP_001129126.1| polyadenylate-binding protein 4 isoform 3 [Homo sapiens]
gi|332808512|ref|XP_003308043.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730718|ref|XP_003775778.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pongo abelii]
gi|426329064|ref|XP_004025564.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Gorilla
gorilla gorilla]
gi|119627671|gb|EAX07266.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_f [Homo sapiens]
gi|410227602|gb|JAA11020.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 135/283 (47%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR-- 312
A T V++ N V DE L+ELFSQ+G+ + VK+ P GK
Sbjct: 180 EAEL-------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|115475838|ref|NP_001061515.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|35215045|dbj|BAC92404.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|35215184|dbj|BAC92537.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|113623484|dbj|BAF23429.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|215694402|dbj|BAG89395.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644698|dbj|BAI39945.1| putative poly(A)-binding protein [Oryza sativa Indica Group]
Length = 660
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 129/259 (49%), Gaps = 20/259 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + + L F+ G VV+V+V R+ T GY ++ F S A A R L+
Sbjct: 40 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEM 99
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ NG+ R+ +++ ++ + IF+ +L + + L +TF + +
Sbjct: 100 LNFTPI-NGKP-IRIMYSNRDPSSRKSGAAN--IFIKNLDKSIDNKALYDTFSV-FGNIL 154
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KV + ++G +KGYGFV+F E A++++NG+ + + + +GP K+
Sbjct: 155 SCKVATE-MSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERENVSG 213
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI----PAGKRC-GFVQ 317
N P V+V NL T+++L+E+F ++G + V + RC GFV
Sbjct: 214 N---------PKFNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVN 264
Query: 318 FADRSCAEEALRMLNGTQL 336
F + A A+ LNG +
Sbjct: 265 FENPDDAARAVEDLNGKKF 283
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 133/286 (46%), Gaps = 20/286 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L F+ G +++ KV + +G+ +GYGF++F A+ +
Sbjct: 128 NIFIKNLDKSIDNKALYDTFSVFGNILSCKVA-TEMSGESKGYGFVQFELEEAAQNAISK 186
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH----TIFVGDLAADVTDYMLQETFRARY 198
NG + + ++ F ++R++ + ++V +L+ T+ L+E F
Sbjct: 187 LNGMLL----NDKKVYVGPFVRKQERENVSGNPKFNNVYVKNLSESTTEDNLKEIFGKFG 242
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
P T + VV+ G+++ +GFV F + + RA+ ++NG + + A K
Sbjct: 243 PIT--SVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRAQKKSERE 300
Query: 259 ASYQNS---QVAQSDDDPNNTTVFVGNLD-SIVTDEHLRELFSQYGQLVHVKIP-----A 309
+ + ++ D T +++ NLD SI DE L+E+F+ +G + K+
Sbjct: 301 MELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEKLKEIFADFGTITSCKVMRDLNGV 360
Query: 310 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F A AL +NG +G + + ++ + ++A+
Sbjct: 361 SKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQRKEERRAR 406
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 82/201 (40%), Gaps = 26/201 (12%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L E L F G + +V V+R + G+ +GF+ F + A R
Sbjct: 216 KFNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMR-EGDGKSRCFGFVNFENPDDAARA 274
Query: 140 LQTFNGTPMPNGE-----------------QNFRLNWASFGAGEKRDDTPDHTIFVGDLA 182
++ NG + E + F N E D +++ +L
Sbjct: 275 VEDLNGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIK-----EAADKNQGTNLYLKNLD 329
Query: 183 ADVTD-YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
+ D L+E F A + + KV+ D L G +KG GFV F + RA+ MNG
Sbjct: 330 DSIDDDEKLKEIF-ADFGTITSCKVMRD-LNGVSKGSGFVAFKSAEDASRALVAMNGKMI 387
Query: 242 STRPMRIGPATNKKTVSASYQ 262
++P+ + A K+ A Q
Sbjct: 388 GSKPLYVALAQRKEERRARLQ 408
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Query: 276 TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI--PAGKRC----GFVQFADRSCAEEALR 329
T+++VG+LD V D L ++FSQ G +V V++ R +V F+ + A AL
Sbjct: 39 TSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALE 98
Query: 330 MLNGTQLGGQNIRLSWG-RSPSNKQA 354
MLN T + G+ IR+ + R PS++++
Sbjct: 99 MLNFTPINGKPIRIMYSNRDPSSRKS 124
>gi|403292062|ref|XP_003937076.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 630
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 135/283 (47%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR-- 312
A T V++ N V DE L+ELFSQ+G+ + VK+ P GK
Sbjct: 180 EAEL-------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|119627670|gb|EAX07265.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_e [Homo sapiens]
Length = 615
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 135/283 (47%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR-- 312
A T V++ N V DE L+ELFSQ+G+ + VK+ P GK
Sbjct: 180 EAEL-------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV + A +A+ +NG ++ G+ I + + +QA+
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 135/289 (46%), Gaps = 23/289 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
+ NG + N + F + A GA K +++ + +V D L+E
Sbjct: 156 EKMNGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKEL 210
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F +++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A
Sbjct: 211 F-SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Query: 254 KKTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA- 309
K A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 269 KVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE 328
Query: 310 ---GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 329 DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|119627673|gb|EAX07268.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_h [Homo sapiens]
Length = 661
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 134/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|448111139|ref|XP_004201770.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
gi|359464759|emb|CCE88464.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
Length = 655
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 125/251 (49%), Gaps = 42/251 (16%)
Query: 42 MMMPPQPQAQPPAMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYL-NT 100
M + P+P P + + AAA + G P Q P RTLW+GDL W+DE + +
Sbjct: 93 MSVLPEP---PLSTKESSAAATKQHG---PLGHQENP---RTLWMGDLDPWLDEAAIADL 143
Query: 101 CFAHTGEVVAVKVIRNKQTG--------QIEGYGFIEFISRAGAERVLQTFNGTPMP--- 149
+ + V VK+IR + GY F+EF + A+ L + NG P+P
Sbjct: 144 WYDVLKKRVNVKLIRPRSHKTDFPYHGVSHLGYCFVEFDNLYDAQLAL-SLNGKPLPESA 202
Query: 150 ------------NGEQNFRLNWASFGAGEKRD----DTPDHTIFVGDLAADVTDYMLQET 193
N ++ FRLNWA+ G D TP+ ++FVGDL+A T+ L
Sbjct: 203 MPSQKVRSRNQDNQKKYFRLNWAN---GATLDAPIIHTPEFSLFVGDLSASTTEAHLLAF 259
Query: 194 FRARYP-STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
F+++YP S K +V+ D ++G+++ +GFVRF DE + +A+ EM G + R +R+ A+
Sbjct: 260 FQSKYPESVKTVRVITDPVSGKSRCFGFVRFSDEHARSKALVEMQGTWFGGRQLRVALAS 319
Query: 253 NKKTVSASYQN 263
K A N
Sbjct: 320 PKTNAKAGNTN 330
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 120/273 (43%), Gaps = 14/273 (5%)
Query: 83 TLWIGDLQYWMDETYLNTCF--AHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+L++GDL E +L F + V V+VI + +G+ +GF+ F + L
Sbjct: 241 SLFVGDLSASTTEAHLLAFFQSKYPESVKTVRVITDPVSGKSRCFGFVRFSDEHARSKAL 300
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
GT G + R+ AS K +T F + + Q F+A P
Sbjct: 301 VEMQGTWF--GGRQLRVALASPKTNAKAGNTNGSPGFY--------NVLPQHFFQA--PG 348
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
G ++ + ++ S A+ + S P I +++S +
Sbjct: 349 GLPLATSPFGYYGNSQLHPQSQYPTLSSSTEALNSVRHHGHSVIPDSIPSYNGAESLSNN 408
Query: 261 YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFAD 320
Q DP NTTVFVG L S V D+ L LF +G + VKIP GK CGF++++
Sbjct: 409 PYGIHHGQPFADPKNTTVFVGGLSSEVNDQTLFALFKPFGIIQQVKIPPGKNCGFIKYSK 468
Query: 321 RSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
R AE+A+ + G +GG +RLSWG+ +N +
Sbjct: 469 RQEAEDAIASMQGFIIGGNRVRLSWGKVSTNNK 501
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 277 TVFVGNLDSIVTDEHLRELF-SQYGQLVHVK------IPAGKRC-GFVQFADRSCAEEAL 328
++FVG+L + T+ HL F S+Y + V + RC GFV+F+D +AL
Sbjct: 241 SLFVGDLSASTTEAHLLAFFQSKYPESVKTVRVITDPVSGKSRCFGFVRFSDEHARSKAL 300
Query: 329 RMLNGTQLGGQNIRLSWGRSPSNKQA 354
+ GT GG+ +R++ +N +A
Sbjct: 301 VEMQGTWFGGRQLRVALASPKTNAKA 326
>gi|48734702|gb|AAH71591.1| PABPC4 protein [Homo sapiens]
Length = 660
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 134/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|410263248|gb|JAA19590.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410263254|gb|JAA19593.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 134/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|242096254|ref|XP_002438617.1| hypothetical protein SORBIDRAFT_10g022900 [Sorghum bicolor]
gi|241916840|gb|EER89984.1| hypothetical protein SORBIDRAFT_10g022900 [Sorghum bicolor]
Length = 631
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 141/296 (47%), Gaps = 30/296 (10%)
Query: 65 AAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEG 124
AA +PP G I +L++GDL +DET L+ F+ +V+V+V R+ +G G
Sbjct: 25 AAAAVLPPL-----GSISSLYVGDLAESVDETQLHAVFSQVAPLVSVRVCRDIVSGVSLG 79
Query: 125 YGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAAD 184
YG++ F SR A L+ N P+ ++ R+ +++ ++ + +FV +L
Sbjct: 80 YGYVNFYSRQEATCALEALNFAPLSG--KHIRVMFSNRDPSLRKSGRAN--LFVKNLEPS 135
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+ L E F + + + KV D G++KGYGFV++ E A+ +NG+ + R
Sbjct: 136 IDSKNLYEMF-SSFGTILSCKVATDS-AGQSKGYGFVQYETEESAQDAINRLNGMLANDR 193
Query: 245 PMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL-- 302
M +G ++ + N V++ NL + +D+ LR+ F+ +G++
Sbjct: 194 EMFVGLHMRRRNREVKFTN--------------VYIKNLPTEFSDDDLRQEFAPFGEITS 239
Query: 303 --VHVKIPAGKRC-GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
V + +C GFV F A EA++ NG + + + + + + +QA+
Sbjct: 240 AVVMRDVNGVSKCFGFVNFEKPEFALEAVKKANGKVINDKTLYVGRAQKKAERQAE 295
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 141/323 (43%), Gaps = 29/323 (8%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
L++ +L+ +D L F+ G +++ KV + GQ +GYGF+++ + A+ +
Sbjct: 127 LFVKNLEPSIDSKNLYEMFSSFGTILSCKVATD-SAGQSKGYGFVQYETEESAQDAINRL 185
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKG 203
NG N R + + + +++ +L + +D L++ F A +
Sbjct: 186 NGML-----ANDREMFVGLHMRRRNREVKFTNVYIKNLPTEFSDDDLRQEF-APFGEITS 239
Query: 204 AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQN 263
A VV+ + G +K +GFV F L A+ + NG + + + +G A K A +
Sbjct: 240 A-VVMRDVNGVSKCFGFVNFEKPEFALEAVKKANGKVINDKTLYVGRAQKKAERQAELK- 297
Query: 264 SQVAQSD-----DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-----GKRC 313
++ Q D D PN +++ N+D + DE L+ LF ++GQ+ K+ K
Sbjct: 298 TKFKQEDRDKKVDKPNGINLYLKNIDDSINDEGLKILFEEFGQVTSCKVMVDAQGRSKGS 357
Query: 314 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYE 373
GFV FA A+ +NG +G + + + AQP + +AQ
Sbjct: 358 GFVLFATAEAGHSAINGMNGRIVGKKPLYVGL--------AQPKEERRAMLMAHFAQ--R 407
Query: 374 NYGYAAAAPQDPSMYYGGYPGYG 396
N AA+ P Y G+P G
Sbjct: 408 NLAMAASPYAGPQQVYFGHPAPG 430
>gi|4504715|ref|NP_003810.1| polyadenylate-binding protein 4 isoform 2 [Homo sapiens]
gi|332808510|ref|XP_003308042.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730716|ref|XP_003775777.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pongo abelii]
gi|397488844|ref|XP_003815453.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pan paniscus]
gi|426329066|ref|XP_004025565.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Gorilla
gorilla gorilla]
gi|12229875|sp|Q13310.1|PABP4_HUMAN RecName: Full=Polyadenylate-binding protein 4; Short=PABP-4;
Short=Poly(A)-binding protein 4; AltName:
Full=Activated-platelet protein 1; Short=APP-1; AltName:
Full=Inducible poly(A)-binding protein; Short=iPABP
gi|1163177|gb|AAC50350.1| inducible poly(A)-binding protein [Homo sapiens]
gi|2801403|gb|AAB97309.1| polyadenylate binding protein [Homo sapiens]
gi|119627669|gb|EAX07264.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_d [Homo sapiens]
gi|410227600|gb|JAA11019.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|1585757|prf||2201474A inducible poly(A)-binding protein
Length = 644
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 134/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|116202083|ref|XP_001226853.1| hypothetical protein CHGG_08926 [Chaetomium globosum CBS 148.51]
gi|121932498|sp|Q2GSX8.1|PABP_CHAGB RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|88177444|gb|EAQ84912.1| hypothetical protein CHGG_08926 [Chaetomium globosum CBS 148.51]
Length = 783
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 133/288 (46%), Gaps = 19/288 (6%)
Query: 59 QAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQ 118
Q A P AG P P +L++G+L + E L F+ G V +++V R+
Sbjct: 43 QTADPDTAG-PTPSSAAPHPQSSASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDTI 101
Query: 119 TGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFV 178
T + GY ++ + S + E+ L+ N T + + R+ W+ ++ T +F+
Sbjct: 102 TRRSLGYAYVNYNSTSDGEKALEELNYTLIKG--RPCRIMWSQRDPALRK--TGQGNVFI 157
Query: 179 GDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
+L + + L +TF A + + KV D G +KGYGFV + + +A+ +N
Sbjct: 158 KNLDVAIDNKALHDTF-AAFGNILSCKVAQDE-NGNSKGYGFVHYETDEAAAQAIKHVNN 215
Query: 239 VFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQ 298
+ + + + +G KK + ++ + N T ++V N+ TDE R+LF++
Sbjct: 216 MLLNEKKVYVGYHIPKKDRQSKFEEMKA-------NFTNIYVKNISLEATDEEFRDLFAK 268
Query: 299 YGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
YG + + + GFV F CA +A+ LNG + GQ++
Sbjct: 269 YGDVTSSSLARDSEGKSRGFGFVNFTTHECAAKAVEELNGKEFRGQDL 316
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 107/241 (44%), Gaps = 30/241 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G +++ KV ++ + G +GYGF+ + + A + ++
Sbjct: 154 NVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQD-ENGNSKGYGFVHYETDEAAAQAIKH 212
Query: 143 FNG-------------TPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYM 189
N P + + F A+F I+V +++ + TD
Sbjct: 213 VNNMLLNEKKVYVGYHIPKKDRQSKFEEMKANF-----------TNIYVKNISLEATDEE 261
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
++ F A+Y + + D G+++G+GFV F +A+ E+NG + + +G
Sbjct: 262 FRDLF-AKYGDVTSSSLARDS-EGKSRGFGFVNFTTHECAAKAVEELNGKEFRGQDLYVG 319
Query: 250 PATNKKTVSASYQNSQVAQSDDDPNN---TTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 306
A K + S A + N +++ NL + D+ LR++FS+YG + K
Sbjct: 320 RAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLADDIDDDKLRQMFSEYGPITSAK 379
Query: 307 I 307
+
Sbjct: 380 V 380
>gi|452984370|gb|EME84127.1| hypothetical protein MYCFIDRAFT_202901 [Pseudocercospora fijiensis
CIRAD86]
Length = 715
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 131/271 (48%), Gaps = 20/271 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++G+L + E L F+ G+V +++V R+ T + GY ++ + S A ER L+
Sbjct: 56 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSAADGERALEE 115
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N T + + R+ W+ ++ T +F+ +L A + + L +TF A + +
Sbjct: 116 LNYTLIKG--KPCRIMWSQRDPALRK--TGQGNVFIKNLDAAIDNKALHDTF-AAFGNIL 170
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KV +D G +KGYGFV + +A+ +NG+ + + + +G KK + ++
Sbjct: 171 SCKVAVDE-HGNSKGYGFVHYETSDAANQAIKSVNGMLLNEKKVFVGHHIPKKDRMSKFE 229
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR-----CGFVQ 317
+ N T ++V N+D+ TD+ RELF +YGQ+ + + GFV
Sbjct: 230 EMKA-------NFTNIYVKNIDAETTDDEFRELFEKYGQITSASLAHDDQGKVRGFGFVN 282
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
F A +A+ LN GQ +L GR+
Sbjct: 283 FIRHEDAAKAVDELNDLDFKGQ--KLYVGRA 311
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 26/239 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G +++ KV ++ G +GYGF+ + + A + +++
Sbjct: 144 NVFIKNLDAAIDNKALHDTFAAFGNILSCKVAVDEH-GNSKGYGFVHYETSDAANQAIKS 202
Query: 143 FNGTPMPNGEQNFRLNWASFGAGE---KRDDTPDH--------TIFVGDLAADVTDYMLQ 191
NG LN G K+D I+V ++ A+ TD +
Sbjct: 203 VNG---------MLLNEKKVFVGHHIPKKDRMSKFEEMKANFTNIYVKNIDAETTDDEFR 253
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
E F +Y A + D G+ +G+GFV F + +A+ E+N + + + +G A
Sbjct: 254 ELFE-KYGQITSASLAHDD-QGKVRGFGFVNFIRHEDAAKAVDELNDLDFKGQKLYVGRA 311
Query: 252 TNKKTVSASYQNSQVAQSDDDP---NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 307
K + AQ + ++V NL + DE LR++F YG + K+
Sbjct: 312 QKKHEREEELRKQYEAQRQEKSAKYQGVNLYVKNLADEIDDEELRKIFEPYGAITSAKV 370
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 264 SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRC---GFVQ 317
+ A ++ +PN+ +++VG LD VT+ L ELFS GQ+ +++ +R +V
Sbjct: 43 TSAAPTNANPNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVN 102
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWG-RSPS 350
+ + E AL LN T + G+ R+ W R P+
Sbjct: 103 YNSAADGERALEELNYTLIKGKPCRIMWSQRDPA 136
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/252 (16%), Positives = 90/252 (35%), Gaps = 79/252 (31%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+++ ++ + F G++ + + + Q G++ G+GF+ FI A + +
Sbjct: 237 NIYVKNIDAETTDDEFRELFEKYGQITSASLAHDDQ-GKVRGFGFVNFIRHEDAAKAVDE 295
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGDLAA 183
N + +F+ G +K+ + + ++V +LA
Sbjct: 296 LN-------DLDFKGQKLYVGRAQKKHEREEELRKQYEAQRQEKSAKYQGVNLYVKNLAD 348
Query: 184 DVTDYMLQETFRARYPSTKGAKVVID---------------------------------- 209
++ D L++ F Y + AKV+ D
Sbjct: 349 EIDDEELRKIFEP-YGAITSAKVMRDTTPLDKVEGAEKEDGEKKESESSAEDKEEEKKDD 407
Query: 210 -----------------RLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252
++ G++KG+GFV F + E +A+TE+N ++P+ + A
Sbjct: 408 ADELAKKLDTVTIGGEKKVLGKSKGFGFVCFSNPDEATKAVTELNQKMIHSKPLYVALAQ 467
Query: 253 NKKTVSASYQNS 264
K+ + + S
Sbjct: 468 RKEVRKSQLEAS 479
>gi|208431833|ref|NP_001129125.1| polyadenylate-binding protein 4 isoform 1 [Homo sapiens]
gi|332808508|ref|XP_513344.3| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pan
troglodytes]
gi|395730714|ref|XP_002811047.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pongo abelii]
gi|397488842|ref|XP_003815452.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pan paniscus]
gi|426329062|ref|XP_004025563.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Gorilla
gorilla gorilla]
gi|66267552|gb|AAH94755.1| PABPC4 protein [Homo sapiens]
gi|119627668|gb|EAX07263.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_c [Homo sapiens]
gi|410227598|gb|JAA11018.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410227604|gb|JAA11021.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 134/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|119627667|gb|EAX07262.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_b [Homo sapiens]
Length = 645
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 134/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|403292060|ref|XP_003937075.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 643
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 134/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|195445204|ref|XP_002070221.1| GK11939 [Drosophila willistoni]
gi|194166306|gb|EDW81207.1| GK11939 [Drosophila willistoni]
Length = 469
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 131/294 (44%), Gaps = 34/294 (11%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E L F G V + K+IR + Y FIE+ + A L
Sbjct: 7 KTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGN---DPYAFIEYSNYQAATTALT 63
Query: 142 TFNGTPMPNGEQNFRLNWASF-GAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
N E+ ++NWA+ G K D + H IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRVFL--EKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK------ 254
++V D T ++KGY FV F ++E A+ MNG + +R +R +T K
Sbjct: 121 ISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 255 --------------------KTVSASYQNSQVAQSDDDPNNTTVFVGNLD-SIVTDEHLR 293
S + + P NTTV+ G ++++D+ +
Sbjct: 181 STKAGGQGGGMGGGGPGNGTGIKSNQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMH 240
Query: 294 ELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
+ F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 241 KHFMQFGPIQDVRVFKEKGFAFIKFVTKEAAARAIEHTHISEVHGSQVKCFWGK 294
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 42/248 (16%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D++ T++VG+L V++ +L F P K K++ R G Y F+ + +
Sbjct: 2 DESQPKTLYVGNLDGSVSEDLLIALFGKMGP-VKSCKII--REPGNDP-YAFIEYSNYQA 57
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+T MN + +++ AT+ + D ++ +FVG+L +
Sbjct: 58 ATTALTAMNKRVFLEKEIKVNWATSPGNQPKT----------DISSHHHIFVGDLSPEIE 107
Query: 289 DEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
E LRE F+ +G++ + +I K FV F ++ AE A++ +NG +G ++IR
Sbjct: 108 TETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIR 167
Query: 343 LSWGRSPSNKQAQPDPNQWNAGYYGYA-----------------QGYENYGYAAAAPQDP 385
+W S ++ P AG G +E Y ++P +
Sbjct: 168 TNW----STRKLPPPRESTKAGGQGGGMGGGGPGNGTGIKSNQRHTFEEV-YNQSSPTNT 222
Query: 386 SMYYGGYP 393
++Y GG+P
Sbjct: 223 TVYCGGFP 230
>gi|156360993|ref|XP_001625306.1| predicted protein [Nematostella vectensis]
gi|156212133|gb|EDO33206.1| predicted protein [Nematostella vectensis]
Length = 584
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 140/278 (50%), Gaps = 30/278 (10%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
I +L++GDL + E L F+ G V++++V R+ T + GY ++ F AE+ L
Sbjct: 12 IASLYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHAEKAL 71
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT----IFVGDLAADVTDYMLQETFRA 196
T N P+ + R+ W ++RD + + IF+ +L + + L +TF A
Sbjct: 72 DTMNFDPIKG--RPCRIMW------QQRDPSLRKSGVGNIFIKNLDKSIDNKSLYDTFSA 123
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+ + K+ D L G KGYGFV F E L A+ ++G+ + + + +G +KK
Sbjct: 124 -FGNILSCKIAQDEL-GNPKGYGFVHFETEDAALEAIARVDGMLLNDKKVFVGRWMSKK- 180
Query: 257 VSASYQNSQVAQSDDDPNN-TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR 312
++ + P T V+V N + DE ++E+ ++ G++V +K+ P GK
Sbjct: 181 -------ERIEKMGTQPKKFTNVYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGKS 233
Query: 313 --CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
GFV F AEEA+ +LNG ++GG+ RL GR+
Sbjct: 234 KGFGFVSFETPEEAEEAVNVLNGKEIGGR--RLWAGRA 269
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 127/286 (44%), Gaps = 15/286 (5%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ K+ ++ + G +GYGF+ F + A +
Sbjct: 100 VGNIFIKNLDKSIDNKSLYDTFSAFGNILSCKIAQD-ELGNPKGYGFVHFETEDAALEAI 158
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAG-EKRDDTPDH--TIFVGDLAADVTDYMLQETFRAR 197
+G + N ++ F W S EK P ++V + D+ D ++E A
Sbjct: 159 ARVDGMLL-NDKKVFVGRWMSKKERIEKMGTQPKKFTNVYVKNFGDDMDDEQMKEIC-AE 216
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
KV+ D G++KG+GFV F E A+ +NG R + G A +
Sbjct: 217 AGKIVSLKVMTDP-EGKSKGFGFVSFETPEEAEEAVNVLNGKEIGGRRLWAGRAKKRAER 275
Query: 258 SASYQNSQVAQSDDDPNN---TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA----- 309
+A + + + N +++ NLD + DE LRE FS YG + K+
Sbjct: 276 AAEVKAEIEKKRQERINRFQGVNLYIKNLDDPIDDERLREEFSPYGTISSAKVMKDDKGN 335
Query: 310 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG L + + ++ + ++AQ
Sbjct: 336 SKGFGFVCFSSPEEATKAVTEMNGRILISKPLYVALAQRREERKAQ 381
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 94/195 (48%), Gaps = 15/195 (7%)
Query: 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGA 136
QP + +++ + MD+ + A G++V++KV+ + + G+ +G+GF+ F + A
Sbjct: 189 QPKKFTNVYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPE-GKSKGFGFVSFETPEEA 247
Query: 137 ERVLQTFNGTPMPN-----GEQNFRLNWASFGAGE---KRDDTPDH----TIFVGDLAAD 184
E + NG + G R A+ E KR + + +++ +L
Sbjct: 248 EEAVNVLNGKEIGGRRLWAGRAKKRAERAAEVKAEIEKKRQERINRFQGVNLYIKNLDDP 307
Query: 185 VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTR 244
+ D L+E F + Y + AKV+ D G +KG+GFV F E +A+TEMNG ++
Sbjct: 308 IDDERLREEF-SPYGTISSAKVMKDD-KGNSKGFGFVCFSSPEEATKAVTEMNGRILISK 365
Query: 245 PMRIGPATNKKTVSA 259
P+ + A ++ A
Sbjct: 366 PLYVALAQRREERKA 380
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 84/192 (43%), Gaps = 31/192 (16%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDLA DVT+ ML E F + S +V D +T R+ GY +V F +
Sbjct: 11 PIASLYVGDLAPDVTEAMLYEKF-STAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHAEK 69
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN RP RI P+ K V +F+ NLD
Sbjct: 70 ALDTMNFDPIKGRPCRIMWQQRDPSLRKSGVG------------------NIFIKNLDKS 111
Query: 287 VTDEHLRELFSQYGQLVHVKIPAG-----KRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
+ ++ L + FS +G ++ KI K GFV F A EA+ ++G L + +
Sbjct: 112 IDNKSLYDTFSAFGNILSCKIAQDELGNPKGYGFVHFETEDAALEAIARVDGMLLNDKKV 171
Query: 342 RLSWGRSPSNKQ 353
+ GR S K+
Sbjct: 172 FV--GRWMSKKE 181
>gi|403292058|ref|XP_003937074.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 659
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 134/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|82595449|ref|XP_725855.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481012|gb|EAA17420.1| polyA binding protein-related [Plasmodium yoelii yoelii]
Length = 859
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 128/257 (49%), Gaps = 20/257 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F G V++++V R+ T + GY ++ + + A AER L T
Sbjct: 17 SLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRDSVTRKSLGYAYVNYHNLADAERALDT 76
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N T + Q RL W+ ++ T + IFV +L + + L +TF + + +
Sbjct: 77 LNYTNIKG--QPARLMWSHRDPSLRKSGTGN--IFVKNLDKTIDNKALFDTF-SMFGNIL 131
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KV D G++K YGFV + DE A+ ++NG+ ++ + +G K
Sbjct: 132 SCKVATDEF-GKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYVGHFIKKS------- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA---GKRCGFVQFA 319
++ +D T ++V N VT+ HL++LFS YG++ + + + ++ F+ ++
Sbjct: 184 ----ERATNDTKFTNLYVKNFPDTVTEAHLKQLFSPYGEITSMIVKSDNKNRKFCFINYS 239
Query: 320 DRSCAEEALRMLNGTQL 336
D A A+ LNG ++
Sbjct: 240 DADSARNAMENLNGKKI 256
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 166 EKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGD 225
E R+ P +++ +L + D L+E F Y + AKV+ D ++KG+GFV FG
Sbjct: 402 ESRNKHPGVNLYIKNLDDSMNDQTLKELFEP-YGTITSAKVMKDD-KDQSKGFGFVCFGT 459
Query: 226 ESEQLRAMTEMNGVFCSTRPMRIGPA 251
E +A+TEM+ + +P+ +G A
Sbjct: 460 HEEANKAVTEMHLKIINGKPLYVGLA 485
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 277 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKI----PAGKRCG--FVQFADRSCAEEALRM 330
+++VG+L VT+ L E+F+ G ++ +++ K G +V + + + AE AL
Sbjct: 17 SLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRDSVTRKSLGYAYVNYHNLADAERALDT 76
Query: 331 LNGTQLGGQNIRLSWG-RSPSNKQA 354
LN T + GQ RL W R PS +++
Sbjct: 77 LNYTNIKGQPARLMWSHRDPSLRKS 101
>gi|301764847|ref|XP_002917846.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Ailuropoda melanoleuca]
Length = 492
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 149/327 (45%), Gaps = 21/327 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V+++++ R+ T + GY ++ F+ A A++ L T
Sbjct: 110 SLYVGDLSADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQKALDT 169
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N M G + RL W+ A ++ + +F+ +L + + L E F A +
Sbjct: 170 MN-FDMIKG-KPIRLMWSQRDAYLRKSGIGN--VFIKNLDKSIDNKTLYEHFSA-FGKIL 224
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
+KV+ D R GY FV F +++ RA+ EMNG + +G N+K A Q
Sbjct: 225 SSKVMSDDQGSR--GYAFVHFQNQNAADRAIEEMNGALLKDCRLFVGRFKNRKDREAELQ 282
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-----GKRCGFVQ 317
N T V+V N + DE L+E+FS+YG+ + VK+ K GFV
Sbjct: 283 NKV-------NEFTNVYVKNFGDDMDDERLKEVFSKYGKTLSVKVMTDSGGKSKGFGFVS 335
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP--NQWNAGYYGYAQGYENY 375
F A++A+ +NG + GQ + + + S +QA+ Q + QG + Y
Sbjct: 336 FDSHEAAKKAVEEMNGKDVNGQLLFVGRAQKKSERQAELKQMFEQLKQERFRRCQGMKLY 395
Query: 376 GYAAAAPQDPSMYYGGYPGYGNYQQPQ 402
D + + +G+ + +
Sbjct: 396 IKNLDDTIDDEKLWREFSSFGSISRVK 422
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 144/312 (46%), Gaps = 34/312 (10%)
Query: 55 MWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI 114
MW+ + A + +G+ ++I +L +D L F+ G++++ KV+
Sbjct: 183 MWSQRDAYLRKSGIG-------------NVFIKNLDKSIDNKTLYEHFSAFGKILSSKVM 229
Query: 115 RNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH 174
+ Q + GY F+ F ++ A+R ++ NG + ++ RL F + R+ +
Sbjct: 230 SDDQGSR--GYAFVHFQNQNAADRAIEEMNGALL----KDCRLFVGRFKNRKDREAELQN 283
Query: 175 ------TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
++V + D+ D L+E F ++Y T KV+ D G++KG+GFV F
Sbjct: 284 KVNEFTNVYVKNFGDDMDDERLKEVF-SKYGKTLSVKVMTDS-GGKSKGFGFVSFDSHEA 341
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQN--SQVAQSD-DDPNNTTVFVGNLDS 285
+A+ EMNG + + + +G A K A + Q+ Q +++ NLD
Sbjct: 342 AKKAVEEMNGKDVNGQLLFVGRAQKKSERQAELKQMFEQLKQERFRRCQGMKLYIKNLDD 401
Query: 286 IVTDEHLRELFSQYGQLVHVKI--PAGKRCGF--VQFADRSCAEEALRMLNGTQLGGQNI 341
+ DE L FS +G + VKI G+ GF + F+ A +A+ +NG LG + +
Sbjct: 402 TIDDEKLWREFSSFGSISRVKIMREEGRSKGFGLICFSSPEEATKAMAEMNGRILGSKPL 461
Query: 342 RLSWGRSPSNKQ 353
++ + P ++
Sbjct: 462 YIALAQRPXERK 473
>gi|340728040|ref|XP_003402340.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Bombus
terrestris]
gi|350417670|ref|XP_003491536.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Bombus
impatiens]
Length = 295
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 99/179 (55%), Gaps = 7/179 (3%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGA 136
P + LW+G L+ +M E+++ F GE VKV+RN+ TG+ GY F+ F + A
Sbjct: 4 PMVLCQLWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMA 63
Query: 137 ERVLQTFNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG +P N FRLN AS K + +I+VGDL+ DV DY L F
Sbjct: 64 LDAMHKLNGKVIPGSNPAVRFRLNHASTTG--KPTTEREFSIWVGDLSTDVDDYSLYRAF 121
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPAT 252
A+Y S + AKV++D +G +KGYGFVRF +E EQ ++ MNG T+ ++I A
Sbjct: 122 AAKYNSIRTAKVILDS-SGFSKGYGFVRFANEEEQKNSLVTMNGYRGLGTKSLKICNAV 179
>gi|383852956|ref|XP_003701991.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Megachile rotundata]
Length = 295
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 101/182 (55%), Gaps = 13/182 (7%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGA 136
P + LW+G L+ +M E+++ F GE VKV+RN+ TG+ GY F+ F + A
Sbjct: 4 PMVLCQLWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMA 63
Query: 137 ERVLQTFNGTPMP--NGEQNFRLNWASFG---AGEKRDDTPDHTIFVGDLAADVTDYMLQ 191
+ NG +P N FRLN AS A E+ + +I+VGDL+ DV DY L
Sbjct: 64 LDAMHKLNGKVIPGSNPAVRFRLNHASTTGKPAAER-----EFSIWVGDLSTDVDDYSLY 118
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGP 250
F A+Y S + AKV++D +G +KGYGFVRF +E EQ ++ MNG T+ ++I
Sbjct: 119 RAFAAKYNSIRTAKVILDS-SGFSKGYGFVRFANEEEQKNSLVTMNGYRGLGTKSLKICN 177
Query: 251 AT 252
A
Sbjct: 178 AV 179
>gi|366987097|ref|XP_003673315.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
gi|342299178|emb|CCC66926.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
Length = 575
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 133/267 (49%), Gaps = 18/267 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++G+L + E L F+ G V +++V R+ T GY ++ F ++ ++
Sbjct: 36 SLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAVTKTSLGYAYVNFNDHEAGKKAIEQ 95
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ + R+ W+ ++ + + IF+ +L D+ + L ETF + +
Sbjct: 96 LNYTPIKG--RLCRIMWSQRDPALRKKGSGN--IFIKNLHPDIDNKALFETFSV-FGNIL 150
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
+K+ D TG++KG+GFV F ES A+ +NG+ + + + + P +K +
Sbjct: 151 SSKIATDE-TGKSKGFGFVHFEHESSAKEAIDALNGMLLNGQEIYVAPHLTRKE-----R 204
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG-----KRCGFVQ 317
+SQ+ ++ + T V+V N++ TDE ELF++YG ++ + K GFV
Sbjct: 205 DSQLEET--KAHFTNVYVKNINLETTDEEFNELFAKYGNVLSSSLEKTEDGKLKGFGFVD 262
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLS 344
F A +A+ LNGT+ Q + +S
Sbjct: 263 FEKHEDAAKAVEELNGTEFKDQTLFVS 289
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 135/287 (47%), Gaps = 23/287 (8%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ K+ + +TG+ +G+GF+ F + A+ +
Sbjct: 125 IFIKNLHPDIDNKALFETFSVFGNILSSKIATD-ETGKSKGFGFVHFEHESSAKEAIDAL 183
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT------IFVGDLAADVTDYMLQETFRAR 197
NG + NG++ + A ++RD + T ++V ++ + TD E F A+
Sbjct: 184 NGMLL-NGQE---IYVAPHLTRKERDSQLEETKAHFTNVYVKNINLETTDEEFNELF-AK 238
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--- 254
Y + + + G+ KG+GFV F + +A+ E+NG + + + A K
Sbjct: 239 YGNVLSSSLEKTE-DGKLKGFGFVDFEKHEDAAKAVEELNGTEFKDQTLFVSRAQKKYER 297
Query: 255 -KTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP----- 308
+ + Y+ S++ + +FV NLD + DE L+E F+ YG + V++
Sbjct: 298 MQELKKQYEASRLEKMAK-YQGVNLFVKNLDDSIDDEKLKEEFAPYGTITSVRVMRTDNG 356
Query: 309 AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ N + G+ + ++ + +++Q
Sbjct: 357 KSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQ 403
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 91/221 (41%), Gaps = 22/221 (9%)
Query: 61 AAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTG 120
AP Q + +++ ++ + N FA G V++ + + G
Sbjct: 195 VAPHLTRKERDSQLEETKAHFTNVYVKNINLETTDEEFNELFAKYGNVLSSS-LEKTEDG 253
Query: 121 QIEGYGFIEFISRAGAERVLQTFNGTPMPNGE-------------QNFRLNWASFGAGEK 167
+++G+GF++F A + ++ NGT + Q + + + EK
Sbjct: 254 KLKGFGFVDFEKHEDAAKAVEELNGTEFKDQTLFVSRAQKKYERMQELKKQYEA-SRLEK 312
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
+FV +L + D L+E F A Y + +V+ G++KG+GFV F
Sbjct: 313 MAKYQGVNLFVKNLDDSIDDEKLKEEF-APYGTITSVRVMRTD-NGKSKGFGFVCFSTPE 370
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQ 268
E +A+TE N + +P+ + A K + SQ+AQ
Sbjct: 371 EATKAITEKNQQIVAGKPLYVAIAQRKDV-----RRSQLAQ 406
>gi|322792679|gb|EFZ16553.1| hypothetical protein SINV_16123 [Solenopsis invicta]
Length = 306
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 103/192 (53%), Gaps = 7/192 (3%)
Query: 65 AAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIE 123
+ G + + P + LW+G L+ +M E+++ F GE VKV+RN+ TG+
Sbjct: 2 SKGNRLTASKMSGPMVLCQLWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPA 61
Query: 124 GYGFIEFISRAGAERVLQTFNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDL 181
GY F+ F + A + NG +P N FRLN AS K + +I+VGDL
Sbjct: 62 GYCFVHFPTDEMALDAMHKLNGKVIPGSNPPVRFRLNHASTTG--KPTTEREFSIWVGDL 119
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF- 240
+ DV DY L F A+Y S + AKV++D +G +KGYGFVRF +E EQ ++ MNG
Sbjct: 120 STDVDDYSLYRAFAAKYNSIRTAKVILDS-SGFSKGYGFVRFANEEEQKNSLITMNGYRG 178
Query: 241 CSTRPMRIGPAT 252
T+ ++I A
Sbjct: 179 LGTKSLKICNAV 190
>gi|395526571|ref|XP_003765434.1| PREDICTED: polyadenylate-binding protein 4 [Sarcophilus harrisii]
Length = 630
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 136/283 (48%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + RA+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-----GKR 312
A A++ + T V++ N + DE L+ELFS+YG+ + VK+ K
Sbjct: 180 EAELG----AKAKE---FTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDSSGKSKG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV F A +A+ +NG + G+ + + + +QA+
Sbjct: 233 FGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAE 275
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 135/286 (47%), Gaps = 23/286 (8%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A+R ++
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 158
Query: 144 NGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
NG + N + F + A GA K +++ + D+ D L+E F +
Sbjct: 159 NGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGDDMDDERLKELF-S 212
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+Y T KV+ D +G++KG+GFV F + +A+ EMNG + + + +G A K
Sbjct: 213 KYGKTLSVKVMTDS-SGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVE 271
Query: 257 VSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA---- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 272 RQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR 331
Query: 310 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 332 SKGFGFVCFSSPDEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A+ A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 33/221 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F+ G+ ++VKV+ + +G+ +G+GF+ F A +
Sbjct: 189 EFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTD-SSGKSKGFGFVSFEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + NG+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKDI-NGKMVF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPDEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN---SQVAQSDDDPNNTTV 278
++P+ + A K+ A N ++A P NT +
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTII 398
>gi|66516817|ref|XP_623816.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Apis
mellifera]
gi|380017726|ref|XP_003692798.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Apis
florea]
Length = 295
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 99/179 (55%), Gaps = 7/179 (3%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGA 136
P + LW+G L+ +M E+++ F GE VKV+RN+ TG+ GY F+ F + A
Sbjct: 4 PMVLCQLWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMA 63
Query: 137 ERVLQTFNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG +P N FRLN AS K + +I+VGDL+ DV DY L F
Sbjct: 64 LDAMHKLNGKVIPGSNPAVRFRLNHASTTG--KPTAEREFSIWVGDLSTDVDDYSLYRAF 121
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGPAT 252
A+Y S + AKV++D +G +KGYGFVRF +E EQ ++ MNG T+ ++I A
Sbjct: 122 AAKYNSIRTAKVILDS-SGFSKGYGFVRFANEEEQKNSLVTMNGYRGLGTKSLKICNAV 179
>gi|328708324|ref|XP_001951465.2| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Acyrthosiphon pisum]
Length = 294
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 89/158 (56%), Gaps = 11/158 (6%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+W+G+++ +M E ++ F GE VK+IRN TG+I GY F++F V+
Sbjct: 123 IWMGNVKPYMTERFITRAFHKMGEYPNNVKLIRNTNTGEISGYAFVDFYDSVS---VMHK 179
Query: 143 FNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
NG +PN F+LN AG+ + ++++G L V DY L +TF RYPS
Sbjct: 180 LNGKYIPNTNPPVKFKLN----HAGKSTSINREFSVWLGILGPGVDDYQLYKTFACRYPS 235
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238
+ AKVV+DR +G +KGYGF+ FG E EQ + MNG
Sbjct: 236 IRTAKVVLDR-SGLSKGYGFIFFGSEEEQKHCLNNMNG 272
>gi|432881580|ref|XP_004073850.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 631
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 131/264 (49%), Gaps = 19/264 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
I +L++GDL + E L F+ G +V+++V R+ T + GY ++ F A AER L
Sbjct: 10 IASLYVGDLHQDVTEAMLYEKFSPAGAIVSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200
T N + Q R+ W+ ++ + IF+ +L + + L +TF A + +
Sbjct: 70 DTMNFDVIKG--QPVRIMWSQRDPSLRKSGVGN--IFIKNLDKSIDNKALYDTFSA-FGN 124
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
KVV D ++GYGFV F RA+ +MNG+ + R + +G ++K A
Sbjct: 125 ILSCKVVCDE--NGSRGYGFVHFETHDAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 261 YQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-----GKRCGF 315
A++ + T V++ N + DE L+E+FS++G V++ G+ GF
Sbjct: 183 LG----ARARE---FTNVYIKNFGEDMDDEKLKEIFSKFGNATSVRVMTDESGGGRGFGF 235
Query: 316 VQFADRSCAEEALRMLNGTQLGGQ 339
V F + A++A+ +NG +L G+
Sbjct: 236 VSFENHEDAQKAVDEMNGKELNGR 259
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 137/285 (48%), Gaps = 21/285 (7%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV+ ++ + GYGF+ F + AER ++
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSR--GYGFVHFETHDAAERAIEKM 158
Query: 144 NGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG + + + ++ + A GA R+ T +++ + D+ D L+E F ++
Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGA-RAREFT---NVYIKNFGEDMDDEKLKEIF-SK 213
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK--K 255
+ + +V+ D +G +G+GFV F + + +A+ EMNG + R M +G A K +
Sbjct: 214 FGNATSVRVMTDE-SGGGRGFGFVSFENHEDAQKAVDEMNGKELNGRIMFVGRAQKKMER 272
Query: 256 TVSASYQNSQVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA----G 310
+ + Q+ Q ++V NLD + DE LR+ FS +G + K+
Sbjct: 273 QMELKRRFEQMKQDRTTRYQGVNLYVKNLDDGIDDERLRKEFSPFGSITSAKVMMEGGRS 332
Query: 311 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG + + + ++ + +QA
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAH 377
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 89/197 (45%), Gaps = 36/197 (18%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVI----DRLTGRTKGYGFVRFGDES 227
P +++VGDL DVT+ ML E F S GA V I D +T R+ GY +V F +
Sbjct: 9 PIASLYVGDLHQDVTEAMLYEKF-----SPAGAIVSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 228 EQLRAMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGN 282
+ RA+ MN +P+RI P+ K V +F+ N
Sbjct: 64 DAERALDTMNFDVIKGQPVRIMWSQRDPSLRKSGVG------------------NIFIKN 105
Query: 283 LDSIVTDEHLRELFSQYGQLVHVKIPA---GKR-CGFVQFADRSCAEEALRMLNGTQLGG 338
LD + ++ L + FS +G ++ K+ G R GFV F AE A+ +NG L
Sbjct: 106 LDKSIDNKALYDTFSAFGNILSCKVVCDENGSRGYGFVHFETHDAAERAIEKMNGMLLND 165
Query: 339 QNIRLSWGRSPSNKQAQ 355
+ + + +S ++A+
Sbjct: 166 RKVFVGRFKSRKEREAE 182
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 18/189 (9%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F+ G +V+V+ + ++G G+GF+ F + A++
Sbjct: 189 EFTNVYIKNFGEDMDDEKLKEIFSKFGNATSVRVMTD-ESGGGRGFGFVSFENHEDAQKA 247
Query: 140 LQTFNGTPMPNGEQNF----------RLNWASFGAGEKRDDTPDH---TIFVGDLAADVT 186
+ NG + NG F ++ K+D T + ++V +L +
Sbjct: 248 VDEMNGKEL-NGRIMFVGRAQKKMERQMELKRRFEQMKQDRTTRYQGVNLYVKNLDDGID 306
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG +T+P+
Sbjct: 307 DERLRKEF-SPFGSITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
Query: 247 RIGPATNKK 255
+ A K+
Sbjct: 364 YVALAQRKE 372
>gi|326478130|gb|EGE02140.1| polyadenylate-binding protein [Trichophyton equinum CBS 127.97]
Length = 782
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 131/272 (48%), Gaps = 21/272 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++G+L + E L F+ G+V +++V R+ T + GY ++ + + A ER L+
Sbjct: 59 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 118
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N T + + R+ W+ ++ T +F+ +L + + L +TF A + +
Sbjct: 119 LNYTLIKG--RPCRIMWSQRDPALRK--TGQGNVFIKNLDTAIDNKALHDTF-AAFGNIL 173
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KV D G +KGYGFV + A+ +NG+ + + + +G KK + ++
Sbjct: 174 SCKVAQDEY-GNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFE 232
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP----AGKR--CGFV 316
+ N T ++V N++ VTDE R LF +YG++ + GK GFV
Sbjct: 233 EMKA-------NFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFV 285
Query: 317 QFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
F+D A A+ LN +L GQ +L GR+
Sbjct: 286 NFSDHEAASAAVEALNEYELKGQ--KLYVGRA 315
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 108/231 (46%), Gaps = 9/231 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G +++ KV ++ + G +GYGF+ + + A ++
Sbjct: 147 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EYGNSKGYGFVHYETAEAATNAIKH 205
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH--TIFVGDLAADVTDYMLQETFRARYPS 200
NG + + + A K ++ + I+V ++ DVTD + F +Y
Sbjct: 206 VNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFE-KYGE 264
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----KT 256
A + D TG+++G+GFV F D A+ +N + + +G A K +
Sbjct: 265 ITSATLSRDNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEE 324
Query: 257 VSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 307
+ Y+ +++ ++ +++ NL + DE LRELFS YG + K+
Sbjct: 325 LRKQYEAARIEKASK-YQGVNLYIKNLSDDIDDEKLRELFSSYGNITSAKV 374
>gi|413956150|gb|AFW88799.1| hypothetical protein ZEAMMB73_294352 [Zea mays]
Length = 735
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 130/263 (49%), Gaps = 21/263 (7%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
L++GDL + E +L F+ G V +V+V R+ T + YG++ + SRA A L
Sbjct: 123 LYVGDLHEDVAEEHLFEAFSKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVVALDKL 182
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKG 203
N + + ++ R+ W++ +R + IFV +L++ V + LQE F +++
Sbjct: 183 NHSLVL--DKPIRVMWSNRDPDARRSGVGN--IFVKNLSSSVDNASLQELF-SKFGDVLS 237
Query: 204 AKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQN 263
KV + G ++GYGFV+F + A+ +NG + R + + K SA
Sbjct: 238 CKVAKNE-DGTSRGYGFVQFTSQESADEAIGNLNGSLFNDRKLHVATFIKKSERSA---- 292
Query: 264 SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKRC--GFVQF 318
++D T +++ +LD +T+E ++ FSQ+G +V VKI P G GFV F
Sbjct: 293 ------NNDDKFTNLYMKHLDDDITEELVKLKFSQFGSIVSVKIMKRPDGSSLGFGFVSF 346
Query: 319 ADRSCAEEALRMLNGTQLGGQNI 341
+ A +A +NG LG + +
Sbjct: 347 QNPESAIKAQSTMNGMLLGSKAL 369
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 143/313 (45%), Gaps = 31/313 (9%)
Query: 54 AMWATQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKV 113
MW+ + + +GV +++ +L +D L F+ G+V++ KV
Sbjct: 194 VMWSNRDPDARRSGVG-------------NIFVKNLSSSVDNASLQELFSKFGDVLSCKV 240
Query: 114 IRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPD 173
+N + G GYGF++F S+ A+ + NG+ + +L+ A+F +R D
Sbjct: 241 AKN-EDGTSRGYGFVQFTSQESADEAIGNLNGSLF----NDRKLHVATFIKKSERSANND 295
Query: 174 H---TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
+++ L D+T+ +++ F +++ S K+ + R G + G+GFV F + +
Sbjct: 296 DKFTNLYMKHLDDDITEELVKLKF-SQFGSIVSVKI-MKRPDGSSLGFGFVSFQNPESAI 353
Query: 231 RAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDD---DPNNTTVFVGNLDSIV 287
+A + MNG+ ++ + + A K+ Q + ++ N + V++ N+ V
Sbjct: 354 KAQSTMNGMLLGSKALYVARAQKKEERKQYLQRLHEEKRNEIMTRCNESNVYIKNIHDEV 413
Query: 288 TDEHLRELFSQYGQLVHVKIPAGKR-----CGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
D+ LR F ++G + K+ + GFV ++ A+ A+ + G G+ +
Sbjct: 414 DDDALRARFVEFGNITSAKVMRDDKGISRGFGFVCYSTPEEAKSAVNNMRGVMFFGKPLY 473
Query: 343 LSWGRSPSNKQAQ 355
++ + ++A+
Sbjct: 474 VAIFQRKEERKAK 486
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 29/192 (15%)
Query: 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235
++VGDL DV + L E F ++ + +V D T R+ YG+V + ++ + A+ +
Sbjct: 123 LYVGDLHEDVAEEHLFEAF-SKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVVALDK 181
Query: 236 MNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNT-----TVFVGNLDSIVTDE 290
+N +P+R V S+ DP+ +FV NL S V +
Sbjct: 182 LNHSLVLDKPIR------------------VMWSNRDPDARRSGVGNIFVKNLSSSVDNA 223
Query: 291 HLRELFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSW 345
L+ELFS++G ++ K+ + GFVQF + A+EA+ LNG+ + + ++
Sbjct: 224 SLQELFSKFGDVLSCKVAKNEDGTSRGYGFVQFTSQESADEAIGNLNGSLFNDRKLHVAT 283
Query: 346 GRSPSNKQAQPD 357
S + A D
Sbjct: 284 FIKKSERSANND 295
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 15/192 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
L++ L + E + F+ G +V+VK+++ + G G+GF+ F + A + T
Sbjct: 300 NLYMKHLDDDITEELVKLKFSQFGSIVSVKIMK-RPDGSSLGFGFVSFQNPESAIKAQST 358
Query: 143 FNGTPMPNG--------EQNFRLNWASFGAGEKRDDT----PDHTIFVGDLAADVTDYML 190
NG + + ++ R + EKR++ + +++ ++ +V D L
Sbjct: 359 MNGMLLGSKALYVARAQKKEERKQYLQRLHEEKRNEIMTRCNESNVYIKNIHDEVDDDAL 418
Query: 191 QETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250
+ F + + AKV+ D G ++G+GFV + E A+ M GV +P+ +
Sbjct: 419 RARF-VEFGNITSAKVMRDD-KGISRGFGFVCYSTPEEAKSAVNNMRGVMFFGKPLYVAI 476
Query: 251 ATNKKTVSASYQ 262
K+ A Q
Sbjct: 477 FQRKEERKAKLQ 488
>gi|255538240|ref|XP_002510185.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550886|gb|EEF52372.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 658
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 135/259 (52%), Gaps = 21/259 (8%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + ++ L F G+VV+V+V R+ T + GYG++ + S A R L
Sbjct: 38 SLYVGDLDLNVTDSQLYDVFNQVGQVVSVRVCRDLTTRRSLGYGYVNYTSPQDAARALDI 97
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP N + R+ ++ ++ T + IF+ +L + L +TF + + +
Sbjct: 98 LNFTPFNN--KPIRIMYSHRDPSIRKSGTGN--IFIKNLDKTIDHKALHDTF-SSFGNIL 152
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KV D +G+++GYGFV+F +E A+ ++NG+ + + + +G K
Sbjct: 153 SCKVATDS-SGQSRGYGFVQFDNEEAAQNAIDKLNGMLLNDKQVYVGHFLRK-------- 203
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL---VHVKIPAGK-RC-GFVQ 317
+ + + S+ NN V+V NL T+E L+ +F +YG++ V ++ GK +C GFV
Sbjct: 204 HERDSASNKKFNN--VYVKNLSESTTEEDLKNIFGEYGEITSAVIMRDADGKSKCFGFVN 261
Query: 318 FADRSCAEEALRMLNGTQL 336
F + A +A+ LNG ++
Sbjct: 262 FENTDAAAKAVESLNGKKI 280
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 136/285 (47%), Gaps = 20/285 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ F+ G +++ KV + +GQ GYGF++F + A+ +
Sbjct: 126 NIFIKNLDKTIDHKALHDTFSSFGNILSCKVATDS-SGQSRGYGFVQFDNEEAAQNAIDK 184
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPD---HTIFVGDLAADVTDYMLQETFRARYP 199
NG + N +Q + F +RD + + ++V +L+ T+ L+ F Y
Sbjct: 185 LNGMLL-NDKQVY---VGHFLRKHERDSASNKKFNNVYVKNLSESTTEEDLKNIF-GEYG 239
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSA 259
A V++ G++K +GFV F + +A+ +NG + +G A KK+
Sbjct: 240 EITSA-VIMRDADGKSKCFGFVNFENTDAAAKAVESLNGKKIDDKEWYVGKA-QKKSERE 297
Query: 260 SYQNSQVAQS----DDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAG-- 310
SQ QS D +++ NLD ++DE+L+ELFS +G + K+ P+G
Sbjct: 298 LELKSQFEQSMKEAVDKYQGVNLYIKNLDDSISDENLKELFSDFGMITSCKVMRDPSGIS 357
Query: 311 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ GFV F+ A AL +NG + + + ++ + ++A+
Sbjct: 358 RGSGFVAFSTPEEASRALAEMNGKMVVSKPLYVALAQRKEERRAR 402
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 17/196 (8%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L E L F GE+ + ++R+ G+ + +GF+ F + A +
Sbjct: 213 KFNNVYVKNLSESTTEEDLKNIFGEYGEITSAVIMRDAD-GKSKCFGFVNFENTDAAAKA 271
Query: 140 LQTFNGTPMPN-----------GEQNFRLNWASF--GAGEKRDDTPDHTIFVGDLAADVT 186
+++ NG + + E+ L + F E D +++ +L ++
Sbjct: 272 VESLNGKKIDDKEWYVGKAQKKSERELELK-SQFEQSMKEAVDKYQGVNLYIKNLDDSIS 330
Query: 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPM 246
D L+E F + + KV+ D +G ++G GFV F E RA+ EMNG ++P+
Sbjct: 331 DENLKELF-SDFGMITSCKVMRDP-SGISRGSGFVAFSTPEEASRALAEMNGKMVVSKPL 388
Query: 247 RIGPATNKKTVSASYQ 262
+ A K+ A Q
Sbjct: 389 YVALAQRKEERRARLQ 404
>gi|348513241|ref|XP_003444151.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oreochromis niloticus]
Length = 637
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 136/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G +++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + Q R+ W+ ++ + IF+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--QPVRIMWSQRDPSLRKSGVGN--IFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGYGFV F + RA+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-----GKRCGFVQ 317
A++ + T V++ N + DE LRELFS+YG + +++ + GFV
Sbjct: 185 ----ARAKE---FTNVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDENGKSRGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
F A++A+ +NG ++ G+ + + + +Q +
Sbjct: 238 FERHEDAQKAVDEMNGKEMNGKLMYVGRAQKKVERQTE 275
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 135/286 (47%), Gaps = 23/286 (8%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV+ ++ + GYGF+ F ++ AER ++
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 158
Query: 144 NGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG + + + ++ + A GA K +++ + ++ D L+E F ++
Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGARAKEFTN----VYIKNFGDEMDDEKLRELF-SK 213
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
Y + +V+ D G+++G+GFV F + +A+ EMNG + + M +G A KK
Sbjct: 214 YGNAMSIRVMTDE-NGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKLMYVGRA-QKKVE 271
Query: 258 SASYQNSQVAQSDDDP----NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA---- 309
+ + Q D ++V NLD + DE LR+ FS +G + K+
Sbjct: 272 RQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 331
Query: 310 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG + + + ++ + +QA
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAH 377
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 36/197 (18%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGA----KVVIDRLTGRTKGYGFVRFGDES 227
P +++VGDL DVT+ ML E F S GA +V D +T R+ GY +V F +
Sbjct: 9 PMASLYVGDLHQDVTEAMLYEKF-----SPAGAILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 228 EQLRAMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGN 282
+ RA+ MN +P+RI P+ K V +F+ N
Sbjct: 64 DAERALDTMNFDVIKGQPVRIMWSQRDPSLRKSGVG------------------NIFIKN 105
Query: 283 LDSIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGG 338
LD + ++ L + FS +G ++ K+ K GFV F + AE A+ +NG L
Sbjct: 106 LDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLND 165
Query: 339 QNIRLSWGRSPSNKQAQ 355
+ + + +S ++A+
Sbjct: 166 RKVFVGRFKSRKEREAE 182
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F+ G ++++V+ + + G+ G+GF+ F A++
Sbjct: 189 EFTNVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTD-ENGKSRGFGFVSFERHEDAQKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
+ NG M NG+ + G +K+ + ++V +
Sbjct: 248 VDEMNGKEM-NGKLMY------VGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + + AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDGIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
+T+P+ + A K+ A N
Sbjct: 358 VATKPLYVALAQRKEERQAHLTN 380
>gi|325303220|tpg|DAA34696.1| TPA_inf: apoptosis-promoting RNA-binding protein TIA-1/TIAR
[Amblyomma variegatum]
Length = 374
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 122/265 (46%), Gaps = 20/265 (7%)
Query: 106 GEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF-GA 164
G+V K+I + Y F+EF A L N E ++NWA+ G
Sbjct: 2 GQVKGCKIIHEPGN---DPYCFVEFSDHQSAASALLAMNKRLCFGKE--MKVNWATSPGN 56
Query: 165 GEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFG 224
K D + H IFVGDL+ ++ L++ F A + +VV D T ++KGYGFV F
Sbjct: 57 TPKLDTSKHHHIFVGDLSPEIETTQLRDAF-APFGDISDCRVVRDPQTLKSKGYGFVSFV 115
Query: 225 DESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQS-----------DDDP 273
+++ A+ MNG + +R +R AT K + + + S P
Sbjct: 116 KKADAENAIGTMNGQWLGSRAIRTNWATRKPPANRTQAEVDITTSTKPLTFDEVYNQSSP 175
Query: 274 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNG 333
N TV+ G + +++E +++ FS YG + +++ K F++ + A A+ +
Sbjct: 176 TNCTVYCGGITQGLSEELMQKTFSSYGAIQEIRVFKDKGYAFIKVGTKEAATHAIVATHN 235
Query: 334 TQLGGQNIRLSWGRSPS--NKQAQP 356
+ + GQ ++ SWG+ + N Q QP
Sbjct: 236 SDVNGQTVKCSWGKEATDPNNQQQP 260
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 38/188 (20%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++GDL ++ T L FA G++ +V+R+ QT + +GYGF+ F+ +A AE + T
Sbjct: 68 IFVGDLSPEIETTQLRDAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKKADAENAIGTM 127
Query: 144 NGTPMPNGEQNFRLNWA----------------------SFGAGEKRDDTPDHTIFVGDL 181
NG + G + R NWA +F + + T++ G +
Sbjct: 128 NGQWL--GSRAIRTNWATRKPPANRTQAEVDITTSTKPLTFDEVYNQSSPTNCTVYCGGI 185
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAM-----TEM 236
+++ ++Q+TF + Y + + +V D KGY F++ G + A+ +++
Sbjct: 186 TQGLSEELMQKTF-SSYGAIQEIRVFKD------KGYAFIKVGTKEAATHAIVATHNSDV 238
Query: 237 NG--VFCS 242
NG V CS
Sbjct: 239 NGQTVKCS 246
>gi|68070939|ref|XP_677383.1| polyadenylate-binding protein [Plasmodium berghei strain ANKA]
gi|56497479|emb|CAH95361.1| polyadenylate-binding protein, putative [Plasmodium berghei]
Length = 833
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 138/276 (50%), Gaps = 21/276 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F G V++++V R+ T + GY ++ + + A AER L T
Sbjct: 17 SLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRDSVTRKSLGYAYVNYHNLADAERALDT 76
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N T + Q RL W+ ++ T + IFV +L + + L +TF + + +
Sbjct: 77 LNYTNIKG--QPARLMWSHRDPSLRKSGTGN--IFVKNLDKTIDNKALFDTF-SMFGNIL 131
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KV D G++K YGFV + DE A+ ++NG+ ++ + +G K
Sbjct: 132 SCKVATDEF-GKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYVGHFIKKS------- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA---GKRCGFVQFA 319
++ +D T ++V N VT+ HL++LFS YG++ + + + ++ F+ ++
Sbjct: 184 ----ERATNDTKFTNLYVKNFPDTVTEAHLKQLFSPYGEITSMIVKSDNKNRKFCFINYS 239
Query: 320 DRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
D A A+ LNG ++ ++ ++ + P ++++
Sbjct: 240 DADSARNAMENLNGKKI-TEDGKIDYNYDPKKEESE 274
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 166 EKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGD 225
E R+ P +++ +L + D L+E F Y + AKV+ D ++KG+GFV FG
Sbjct: 399 ESRNKHPGVNLYIKNLDDSMNDQTLKELFEP-YGTITSAKVMKDD-KDQSKGFGFVCFGT 456
Query: 226 ESEQLRAMTEMNGVFCSTRPMRIGPA 251
E +A+TEM+ + +P+ +G A
Sbjct: 457 HEEANKAVTEMHLKIINGKPLYVGLA 482
>gi|413954516|gb|AFW87165.1| hypothetical protein ZEAMMB73_979278 [Zea mays]
gi|414865260|tpg|DAA43817.1| TPA: hypothetical protein ZEAMMB73_808082 [Zea mays]
Length = 643
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 146/311 (46%), Gaps = 34/311 (10%)
Query: 57 ATQAAAPQAAGVAVPPQQQGQP-------GEIRTLWIGDLQYWMDETYLNTCFAHTGEVV 109
+T +AP AA V P +G P G + +L++GDL +DE L+ F+ V
Sbjct: 5 STTPSAPIAAEVV--PVAEGTPAAVLPPLGSMASLYVGDLAETVDEPQLHALFSQVAPVA 62
Query: 110 AVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRD 169
V+V R+ +G GYG++ F SR A R L+ N TP+ + R+ +++ ++
Sbjct: 63 TVRVCRDILSGVSLGYGYVNFYSRQEATRALEALNFTPLIG--KYIRVMFSNRDPSLRKS 120
Query: 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 229
+ +FV +L ++ L E F + + + KV D G++KGYGFV++ E
Sbjct: 121 GRAN--LFVKNLEPNIDSKNLYEIF-SSFGAILSCKVATDS-AGQSKGYGFVQYETEESA 176
Query: 230 LRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTD 289
A+ +NG+ + R M +G ++ D + T V++ NL + ++
Sbjct: 177 EAAINGLNGMLANNRKMFVGLHMRRR--------------DREVKFTNVYIKNLPTEFSE 222
Query: 290 EHLRELFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLS 344
+ LR+ F+ +G++ + A K GFV F A EA+ NG +G + + +
Sbjct: 223 DDLRQEFAPFGEITSAVVMRDADGASKCFGFVNFKKPEFAIEAVEKANGKAIGDKTLYVG 282
Query: 345 WGRSPSNKQAQ 355
+ ++A+
Sbjct: 283 RAQKKEERKAE 293
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 141/320 (44%), Gaps = 28/320 (8%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
L++ +L+ +D L F+ G +++ KV + GQ +GYGF+++ + AE +
Sbjct: 124 NLFVKNLEPNIDSKNLYEIFSSFGAILSCKVATD-SAGQSKGYGFVQYETEESAEAAING 182
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT-IFVGDLAADVTDYMLQETFRARYPST 201
NG N + L+ +RD T +++ +L + ++ L++ F A +
Sbjct: 183 LNGMLANNRKMFVGLHM------RRRDREVKFTNVYIKNLPTEFSEDDLRQEF-APFGEI 235
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A VV+ G +K +GFV F + A+ + NG + + +G A K+ A
Sbjct: 236 TSA-VVMRDADGASKCFGFVNFKKPEFAIEAVEKANGKAIGDKTLYVGRAQKKEERKAEL 294
Query: 262 QNSQVAQSD---DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKR-----C 313
+ D D PN +++ N+D + DE L++LF ++GQ+ K+ R
Sbjct: 295 KTRFGRGRDNKVDKPNGINLYLKNIDDGINDEGLKKLFEEFGQVASCKVMVDARGRSKGS 354
Query: 314 GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYE 373
GFV FA + A+ +NG +G + + + AQP + +AQ
Sbjct: 355 GFVSFATAEAGQRAINRMNGRIVGKKPLYVGL--------AQPKEERKAMLMAHFAQ--R 404
Query: 374 NYGYAAAAPQDPSMYYGGYP 393
N AA+ P Y G+P
Sbjct: 405 NLAMAASQYAGPQQVYFGHP 424
>gi|348513239|ref|XP_003444150.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oreochromis niloticus]
Length = 634
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 136/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G +++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + Q R+ W+ ++ + IF+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--QPVRIMWSQRDPSLRKSGVGN--IFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGYGFV F + RA+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-----GKRCGFVQ 317
A++ + T V++ N + DE LRELFS+YG + +++ + GFV
Sbjct: 185 ----ARAKE---FTNVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDENGKSRGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
F A++A+ +NG ++ G+ + + + +Q +
Sbjct: 238 FERHEDAQKAVDEMNGKEMNGKLMYVGRAQKKVERQTE 275
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 135/286 (47%), Gaps = 23/286 (8%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV+ ++ + GYGF+ F ++ AER ++
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAIEKM 158
Query: 144 NGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
NG + + + ++ + A GA K +++ + ++ D L+E F ++
Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGARAKEFTN----VYIKNFGDEMDDEKLRELF-SK 213
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
Y + +V+ D G+++G+GFV F + +A+ EMNG + + M +G A KK
Sbjct: 214 YGNAMSIRVMTDE-NGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKLMYVGRA-QKKVE 271
Query: 258 SASYQNSQVAQSDDDP----NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA---- 309
+ + Q D ++V NLD + DE LR+ FS +G + K+
Sbjct: 272 RQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 331
Query: 310 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG + + + ++ + +QA
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAH 377
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 36/197 (18%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGA----KVVIDRLTGRTKGYGFVRFGDES 227
P +++VGDL DVT+ ML E F S GA +V D +T R+ GY +V F +
Sbjct: 9 PMASLYVGDLHQDVTEAMLYEKF-----SPAGAILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 228 EQLRAMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGN 282
+ RA+ MN +P+RI P+ K V +F+ N
Sbjct: 64 DAERALDTMNFDVIKGQPVRIMWSQRDPSLRKSGVG------------------NIFIKN 105
Query: 283 LDSIVTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGG 338
LD + ++ L + FS +G ++ K+ K GFV F + AE A+ +NG L
Sbjct: 106 LDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLND 165
Query: 339 QNIRLSWGRSPSNKQAQ 355
+ + + +S ++A+
Sbjct: 166 RKVFVGRFKSRKEREAE 182
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F+ G ++++V+ + + G+ G+GF+ F A++
Sbjct: 189 EFTNVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTD-ENGKSRGFGFVSFERHEDAQKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
+ NG M NG+ + G +K+ + ++V +
Sbjct: 248 VDEMNGKEM-NGKLMY------VGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + + AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDGIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
+T+P+ + A K+ A N
Sbjct: 358 VATKPLYVALAQRKEERQAHLTN 380
>gi|224137600|ref|XP_002327166.1| predicted protein [Populus trichocarpa]
gi|222835481|gb|EEE73916.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 145/287 (50%), Gaps = 24/287 (8%)
Query: 78 PGEIR----TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISR 133
PG I+ +L++GDL + + ++ L F G+VV+V+V R+ T + GYG++ + +
Sbjct: 4 PGAIQFVPTSLYVGDLDFNVTDSQLYDVFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNP 63
Query: 134 AGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQET 193
A R L N TP+ N + R+ ++ ++ + IF+ +L + L +T
Sbjct: 64 QDAARALDVLNFTPLNN--KPIRIMYSHRDPSIRKSGMAN--IFIKNLDKGIDHKALHDT 119
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F + + + KV D +G++KGYGFV+F E A+ ++NG+ + + + +G
Sbjct: 120 F-SSFGNILSCKVATDA-SGQSKGYGFVQFDSEEAAQNAIDKLNGMLVNDKQVYVGHFLR 177
Query: 254 KKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQL---VHVKIPAG 310
K+ + + + NN VFV NL TDE L+ +F+++G + V ++ G
Sbjct: 178 KQDRDGALYSIKF-------NN--VFVKNLAESTTDEELKNIFAEHGAITSAVVMRDADG 228
Query: 311 K-RC-GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K +C GFV F A +A+ LNG ++ G+ + + S ++ +
Sbjct: 229 KSKCFGFVNFESADDAAKAVEALNGKKIDGEEWYVGKAQKKSERELE 275
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 136/286 (47%), Gaps = 21/286 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ F+ G +++ KV + +GQ +GYGF++F S A+ +
Sbjct: 101 NIFIKNLDKGIDHKALHDTFSSFGNILSCKVATDA-SGQSKGYGFVQFDSEEAAQNAIDK 159
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRD----DTPDHTIFVGDLAADVTDYMLQETFRARY 198
NG + N +Q + F + RD + +FV +LA TD L+ F A +
Sbjct: 160 LNGM-LVNDKQVY---VGHFLRKQDRDGALYSIKFNNVFVKNLAESTTDEELKNIF-AEH 214
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT-- 256
+ A VV+ G++K +GFV F + +A+ +NG +G A K
Sbjct: 215 GAITSA-VVMRDADGKSKCFGFVNFESADDAAKAVEALNGKKIDGEEWYVGKAQKKSERE 273
Query: 257 --VSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAG- 310
+ ++ S + ++ D +++ NLD + DE L+ELFS +G + K+ P+G
Sbjct: 274 LELKGRFEQS-MKETVDKFQGLNLYIKNLDDSINDEKLKELFSDFGAITSCKVMRDPSGI 332
Query: 311 -KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ GFV F+ A AL +NG L + + ++ + ++A+
Sbjct: 333 SRGSGFVAFSTPEEASRALAEMNGKMLISKPLYVALAQRKEERRAR 378
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 27/201 (13%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
+ +++ +L + L FA G + + V+R+ G+ + +GF+ F S A +
Sbjct: 189 KFNNVFVKNLAESTTDEELKNIFAEHGAITSAVVMRDAD-GKSKCFGFVNFESADDAAKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRD--------------DTPDH----TIFVGDL 181
++ NG + +GE+ W A +K + +T D +++ +L
Sbjct: 248 VEALNGKKI-DGEE-----WYVGKAQKKSERELELKGRFEQSMKETVDKFQGLNLYIKNL 301
Query: 182 AADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241
+ D L+E F + + + KV+ D +G ++G GFV F E RA+ EMNG
Sbjct: 302 DDSINDEKLKELF-SDFGAITSCKVMRDP-SGISRGSGFVAFSTPEEASRALAEMNGKML 359
Query: 242 STRPMRIGPATNKKTVSASYQ 262
++P+ + A K+ A Q
Sbjct: 360 ISKPLYVALAQRKEERRARLQ 380
>gi|380793569|gb|AFE68660.1| polyadenylate-binding protein 4 isoform 3, partial [Macaca mulatta]
Length = 485
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 139/278 (50%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
A++ + T V++ N V DE L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 185 ----AKAKE---FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAE 275
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 136/286 (47%), Gaps = 21/286 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ ++
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAIEK 157
Query: 143 FNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
NG + + + ++ + A GA K +++ + +V D L+E F +
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF-S 212
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 213 QFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVE 271
Query: 257 VSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA---- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 272 RQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR 331
Query: 310 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKIIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|126330207|ref|XP_001365338.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Monodelphis
domestica]
Length = 614
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 138/283 (48%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + RA+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR-- 312
A A++ + T V++ N + D L+ELFS+YG+ + VK+ P+GK
Sbjct: 180 EAELG----AKAKE---FTNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPSGKSKG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV F A +A+ +NG + G+ + + + +QA+
Sbjct: 233 FGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAE 275
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 135/286 (47%), Gaps = 23/286 (8%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A+R ++
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 158
Query: 144 NGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
NG + N + F + A GA K +++ + D+ D L+E F +
Sbjct: 159 NGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGDDMDDGRLKELF-S 212
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+Y T KV+ D +G++KG+GFV F + +A+ EMNG + + + +G A K
Sbjct: 213 KYGKTLSVKVMTDP-SGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVE 271
Query: 257 VSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA---- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 272 RQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR 331
Query: 310 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 332 SKGFGFVCFSSPDEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A+ A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 33/221 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F+ G+ ++VKV+ + +G+ +G+GF+ F A +
Sbjct: 189 EFTNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDP-SGKSKGFGFVSFEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + NG+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKDI-NGKMVF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPDEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN---SQVAQSDDDPNNTTV 278
++P+ + A K+ A N ++A P NT +
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTII 398
>gi|126320658|ref|XP_001364500.1| PREDICTED: polyadenylate-binding protein 4-like [Monodelphis
domestica]
Length = 630
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 138/283 (48%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + RA+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR-- 312
A A++ + T V++ N + D L+ELFS+YG+ + VK+ P+GK
Sbjct: 180 EAELG----AKAKE---FTNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPSGKSKG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV F A +A+ +NG + G+ + + + +QA+
Sbjct: 233 FGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAE 275
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 135/286 (47%), Gaps = 23/286 (8%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A+R ++
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 158
Query: 144 NGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
NG + N + F + A GA K +++ + D+ D L+E F +
Sbjct: 159 NGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGDDMDDGRLKELF-S 212
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+Y T KV+ D +G++KG+GFV F + +A+ EMNG + + + +G A K
Sbjct: 213 KYGKTLSVKVMTDP-SGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVE 271
Query: 257 VSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA---- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 272 RQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR 331
Query: 310 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 332 SKGFGFVCFSSPDEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A+ A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 33/221 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F+ G+ ++VKV+ + +G+ +G+GF+ F A +
Sbjct: 189 EFTNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDP-SGKSKGFGFVSFEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + NG+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKDI-NGKMVF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPDEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN---SQVAQSDDDPNNTTV 278
++P+ + A K+ A N ++A P NT +
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTII 398
>gi|225557655|gb|EEH05941.1| polyadenylate-binding protein [Ajellomyces capsulatus G186AR]
gi|240278336|gb|EER41843.1| polyadenylate-binding protein [Ajellomyces capsulatus H143]
gi|325096361|gb|EGC49671.1| polyadenylate-binding protein [Ajellomyces capsulatus H88]
Length = 784
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 131/276 (47%), Gaps = 29/276 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++G+L + E L F+ G+V +++V R+ T + GY ++ + + A ER L+
Sbjct: 56 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRD----DTPDHTIFVGDLAADVTDYMLQETFRARY 198
N T + + R+ W+ +RD T +F+ +L + + L +TF A +
Sbjct: 116 LNYTLIKG--KPCRIMWS------QRDPALRKTGQGNVFIKNLDTAIDNKALHDTF-AAF 166
Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258
+ KV D G +KGYGFV + A+ +NG+ + + + +G KK
Sbjct: 167 GNILSCKVAQDEF-GNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQ 225
Query: 259 ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP----AGKR-- 312
+ ++ + N T V+V NLD+ V++E RELF +YG++ I GK
Sbjct: 226 SKFEEMKA-------NFTNVYVKNLDTEVSNEEFRELFEKYGEITSASISRDGETGKSRG 278
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
GFV F A A+ LN + GQ +L GR+
Sbjct: 279 FGFVNFVKHESAAAAVEELNDKEYKGQ--KLYVGRA 312
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 103/230 (44%), Gaps = 7/230 (3%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G +++ KV ++ + G +GYGF+ + + A ++
Sbjct: 144 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAATNAIKH 202
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH--TIFVGDLAADVTDYMLQETFRARYPS 200
NG + + + A K ++ + ++V +L +V++ +E F +Y
Sbjct: 203 VNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNLDTEVSNEEFRELFE-KYGE 261
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A + D TG+++G+GFV F A+ E+N + + +G A K
Sbjct: 262 ITSASISRDGETGKSRGFGFVNFVKHESAAAAVEELNDKEYKGQKLYVGRAQKKHEREEE 321
Query: 261 YQNSQVAQSDDDPNN---TTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 307
+ A + + ++V NL + DE LR+LF +G + ++
Sbjct: 322 LRKQHEAARVEKASKYQGVNLYVKNLTDDIDDEKLRDLFISFGNITSARV 371
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 90/193 (46%), Gaps = 19/193 (9%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+++VG+L VT+ ML E F + +V D +T R+ GY +V + + ++ RA+
Sbjct: 56 SLYVGELDPSVTEAMLFELF-SSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 114
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
++N +P RI + + + Q + VF+ NLD+ + ++ L +
Sbjct: 115 DLNYTLIKGKPCRIMWSQRDPALRKTGQGN-------------VFIKNLDTAIDNKALHD 161
Query: 295 LFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP 349
F+ +G ++ K+ K GFV + A A++ +NG L + + + +
Sbjct: 162 TFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAK 221
Query: 350 SNKQAQPDPNQWN 362
++Q++ + + N
Sbjct: 222 KDRQSKFEEMKAN 234
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 17/120 (14%)
Query: 248 IGPATNKKTVSASYQNSQVAQSDDDPNNT----------TVFVGNLDSIVTDEHLRELFS 297
+ +TN TV+ ++ N + PN+ +++VG LD VT+ L ELFS
Sbjct: 17 VESSTNGTTVNTNFANDAAGDGSETPNSAGPSTTQPHSASLYVGELDPSVTEAMLFELFS 76
Query: 298 QYGQLVHVKI---PAGKRC---GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG-RSPS 350
GQ+ +++ +R +V + + + E AL LN T + G+ R+ W R P+
Sbjct: 77 SIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPA 136
>gi|326473644|gb|EGD97653.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton tonsurans CBS 112818]
Length = 470
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 124/292 (42%), Gaps = 62/292 (21%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
R L++G L + E L F TG V +VK+I +K
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKN----------------------- 138
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-TIFVGDLAADVTDYMLQETFRARYPS 200
R+NWA ++DT H IFVGDL+ +V D +L + F A S
Sbjct: 139 ------------EIRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSA-CGS 185
Query: 201 TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSAS 260
A+V+ D TGR++GYGFV F + ++ +A++ M+G + +R +R A K S S
Sbjct: 186 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 245
Query: 261 YQNSQVA-------------------QSDD-----DPN-NTTVFVGNLDSIVTDEHLREL 295
Q + A QS D P TT +VGNL T L L
Sbjct: 246 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPL 305
Query: 296 FSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGR 347
F +G +V + A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 306 FQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 357
>gi|444313983|ref|XP_004177649.1| hypothetical protein TBLA_0A03300 [Tetrapisispora blattae CBS 6284]
gi|387510688|emb|CCH58130.1| hypothetical protein TBLA_0A03300 [Tetrapisispora blattae CBS 6284]
Length = 362
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 91/173 (52%), Gaps = 14/173 (8%)
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCS--TRPMRIGPATNKK 255
Y S +++ D T ++G ++F + E + + E+ G+ S P+ I T +
Sbjct: 163 YHSFDTVEILRDPNTSASRGLALIQFKEGIEMQKILVELQGIHLSQSALPLTILQFTKQY 222
Query: 256 TVSASYQNS------------QVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLV 303
T+S SY NS + S +DP NTTVF+G L S+VT+ LR LF +G++V
Sbjct: 223 TLSHSYSNSPSPLLFSSHSLSSSSSSLEDPTNTTVFIGGLSSLVTENELRSLFQPFGEIV 282
Query: 304 HVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQP 356
+VKIP GK CGFVQ+ R AE A+ + G + IRLSWG++ +
Sbjct: 283 YVKIPFGKGCGFVQYETRKAAELAIHKMKGVSIKNSKIRLSWGKAAKTSNTRK 335
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
T++IG L + E L + F GE+V VK+ K G GF+++ +R AE +
Sbjct: 256 TVFIGGLSSLVTENELRSLFQPFGEIVYVKIPFGK------GCGFVQYETRKAAELAIHK 309
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDT 171
G + N + RL+W G K +T
Sbjct: 310 MKGVSIKNSK--IRLSW---GKAAKTSNT 333
>gi|332030538|gb|EGI70226.1| tRNA selenocysteine 1-associated protein 1 [Acromyrmex echinatior]
Length = 295
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 101/182 (55%), Gaps = 13/182 (7%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGA 136
P + LW+G L+ +M E+++ F GE VKV+RN+ TG+ GY F+ F + A
Sbjct: 4 PMVLCQLWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMA 63
Query: 137 ERVLQTFNGTPMP--NGEQNFRLNWASFG---AGEKRDDTPDHTIFVGDLAADVTDYMLQ 191
+ NG +P N FRLN AS A E+ + +I+VGDL+ DV DY L
Sbjct: 64 LDAMHKLNGKVIPGSNPPVRFRLNHASTTGKPAAER-----EFSIWVGDLSTDVDDYSLY 118
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGP 250
F A+Y S + AKV++D +G +KGYGFVRF +E EQ ++ MNG T+ ++I
Sbjct: 119 RAFAAKYNSIRTAKVILDS-SGFSKGYGFVRFANEEEQKNSLITMNGYRGLGTKSLKICN 177
Query: 251 AT 252
A
Sbjct: 178 AV 179
>gi|126330205|ref|XP_001365269.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Monodelphis
domestica]
Length = 630
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 138/283 (48%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + RA+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR-- 312
A A++ + T V++ N + D L+ELFS+YG+ + VK+ P+GK
Sbjct: 180 EAELG----AKAKE---FTNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPSGKSKG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV F A +A+ +NG + G+ + + + +QA+
Sbjct: 233 FGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAE 275
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 135/286 (47%), Gaps = 23/286 (8%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A+R ++
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAIEKM 158
Query: 144 NGTPMPNGEQNF-------RLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRA 196
NG + N + F + A GA K +++ + D+ D L+E F +
Sbjct: 159 NGMLL-NDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGDDMDDGRLKELF-S 212
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKT 256
+Y T KV+ D +G++KG+GFV F + +A+ EMNG + + + +G A K
Sbjct: 213 KYGKTLSVKVMTDP-SGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVE 271
Query: 257 VSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA---- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 272 RQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR 331
Query: 310 GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 332 SKGFGFVCFSSPDEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A+ A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 33/221 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F+ G+ ++VKV+ + +G+ +G+GF+ F A +
Sbjct: 189 EFTNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDP-SGKSKGFGFVSFEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + NG+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKDI-NGKMVF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPDEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN---SQVAQSDDDPNNTTV 278
++P+ + A K+ A N ++A P NT +
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTII 398
>gi|302658195|ref|XP_003020804.1| hypothetical protein TRV_05080 [Trichophyton verrucosum HKI 0517]
gi|291184669|gb|EFE40186.1| hypothetical protein TRV_05080 [Trichophyton verrucosum HKI 0517]
Length = 816
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 148/320 (46%), Gaps = 25/320 (7%)
Query: 61 AAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTG 120
AA + +G + P Q +L++G+L + E L F+ G+V +++V R+ T
Sbjct: 56 AAGEPSGTSAPATSQPHSA---SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTR 112
Query: 121 QIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGD 180
+ GY ++ + + A ER L+ N T + + R+ W+ ++ T +F+ +
Sbjct: 113 RSLGYAYVNYNNTADGERALEDLNYTLIKG--RPCRIMWSQRDPALRK--TGQGNVFIKN 168
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + + L +TF A + + KV D G +KGYGFV + A+ +NG+
Sbjct: 169 LDTAIDNKALHDTF-AAFGNILSCKVAQDEY-GNSKGYGFVHYETAEAATNAIKHVNGML 226
Query: 241 CSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYG 300
+ + + +G KK + ++ + N T ++V N++ VTDE R LF +YG
Sbjct: 227 LNEKKVFVGHHIAKKDRQSKFEEMKA-------NFTNIYVKNVEQDVTDEEFRGLFEKYG 279
Query: 301 QLVHVKIP----AGKR--CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQA 354
++ + GK GFV F+D A A+ LN +L GQ +L GR+ +
Sbjct: 280 EITSATLSRDNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQ--KLYVGRAQKKHER 337
Query: 355 QPD-PNQWNAGYYGYAQGYE 373
+ + Q+ A A Y+
Sbjct: 338 EEELRKQYEAARIEKASKYQ 357
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 108/230 (46%), Gaps = 9/230 (3%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L+ FA G +++ KV ++ + G +GYGF+ + + A ++
Sbjct: 164 VFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EYGNSKGYGFVHYETAEAATNAIKHV 222
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDH--TIFVGDLAADVTDYMLQETFRARYPST 201
NG + + + A K ++ + I+V ++ DVTD + F +Y
Sbjct: 223 NGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFE-KYGEI 281
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----KTV 257
A + D TG+++G+GFV F D A+ +N + + +G A K + +
Sbjct: 282 TSATLSRDNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEEL 341
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 307
Y+ +++ ++ +++ NL + DE LRELFS YG + K+
Sbjct: 342 RKQYEAARIEKASK-YQGVNLYIKNLSDDIDDEKLRELFSSYGNITSAKV 390
>gi|302500992|ref|XP_003012489.1| hypothetical protein ARB_01449 [Arthroderma benhamiae CBS 112371]
gi|291176047|gb|EFE31849.1| hypothetical protein ARB_01449 [Arthroderma benhamiae CBS 112371]
Length = 801
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 131/272 (48%), Gaps = 21/272 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++G+L + E L F+ G+V +++V R+ T + GY ++ + + A ER L+
Sbjct: 59 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 118
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N T + + R+ W+ ++ T +F+ +L + + L +TF A + +
Sbjct: 119 LNYTLIKG--RPCRIMWSQRDPALRK--TGQGNVFIKNLDTAIDNKALHDTF-AAFGNIL 173
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KV D G +KGYGFV + A+ +NG+ + + + +G KK + ++
Sbjct: 174 SCKVAQDEY-GNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFE 232
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP----AGKR--CGFV 316
+ N T ++V N++ VTDE R LF +YG++ + GK GFV
Sbjct: 233 EMKA-------NFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFV 285
Query: 317 QFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
F+D A A+ LN +L GQ +L GR+
Sbjct: 286 NFSDHEAASAAVEALNEYELKGQ--KLYVGRA 315
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 108/230 (46%), Gaps = 9/230 (3%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L+ FA G +++ KV ++ + G +GYGF+ + + A ++
Sbjct: 148 VFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EYGNSKGYGFVHYETAEAATNAIKHV 206
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDH--TIFVGDLAADVTDYMLQETFRARYPST 201
NG + + + A K ++ + I+V ++ DVTD + F +Y
Sbjct: 207 NGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFE-KYGEI 265
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----KTV 257
A + D TG+++G+GFV F D A+ +N + + +G A K + +
Sbjct: 266 TSATLSRDNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEEL 325
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 307
Y+ +++ ++ +++ NL + DE LRELFS YG + K+
Sbjct: 326 RKQYEAARIEKASK-YQGVNLYIKNLSDDIDDEKLRELFSSYGNITSAKV 374
>gi|224081795|ref|XP_002196994.1| PREDICTED: polyadenylate-binding protein 4 [Taeniopygia guttata]
Length = 629
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 134/283 (47%), Gaps = 29/283 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FN-----GTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRAR 197
N G P+ R+ W+ ++ + +F+ +L + + L +TF A
Sbjct: 72 MNFDVIKGKPI-------RIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA- 121
Query: 198 YPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTV 257
+ + KVV D +KGY FV F + RA+ +MNG+ + R + +G ++K
Sbjct: 122 FGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 179
Query: 258 SASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR-- 312
A T V++ N + DE L+ELF +YG+ + VK+ P GK
Sbjct: 180 EAEL-------GAKAKEFTNVYIKNFGDDMDDERLKELFGKYGKTLSVKVMTDPTGKSKG 232
Query: 313 CGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
GFV F A +A+ +NG + G+ + + + + +QA+
Sbjct: 233 FGFVSFEKHEEANKAVEEMNGKDINGKMLFVGRAQKKAERQAE 275
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A+R +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQDAADRAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + D+ D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGDDMDDERLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+Y T KV+ D TG++KG+GFV F E +A+ EMNG + + + +G A K
Sbjct: 212 -GKYGKTLSVKVMTDP-TGKSKGFGFVSFEKHEEANKAVEEMNGKDINGKMLFVGRAQKK 269
Query: 255 KTVSASYQN--SQVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 AERQAELKRRFEQLKQERLSRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 33/221 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F G+ ++VKV+ + TG+ +G+GF+ F A +
Sbjct: 189 EFTNVYIKNFGDDMDDERLKELFGKYGKTLSVKVMTDP-TGKSKGFGFVSFEKHEEANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + NG+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKDI-NGKMLF------VGRAQKKAERQAELKRRFEQLKQERLSRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN---SQVAQSDDDPNNTTV 278
++P+ + A K+ A N ++A P NT +
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTII 398
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL D+T+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A+ A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
>gi|307181029|gb|EFN68803.1| tRNA selenocysteine-associated protein 1 [Camponotus floridanus]
Length = 304
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 101/182 (55%), Gaps = 13/182 (7%)
Query: 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQIEGYGFIEFISRAGA 136
P + LW+G L+ +M E+++ F GE VKV+RN+ TG+ GY F+ F + A
Sbjct: 4 PMVLCQLWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMA 63
Query: 137 ERVLQTFNGTPMP--NGEQNFRLNWASFG---AGEKRDDTPDHTIFVGDLAADVTDYMLQ 191
+ NG +P N FRLN AS A E+ + +I+VGDL+ DV DY L
Sbjct: 64 LDAMHKLNGKVIPGSNPPVRFRLNHASTTGKPAAER-----EFSIWVGDLSTDVDDYSLY 118
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF-CSTRPMRIGP 250
F A+Y S + AKV++D +G +KGYGFVRF +E EQ ++ MNG T+ ++I
Sbjct: 119 RAFAAKYNSIRTAKVILDS-SGFSKGYGFVRFANEEEQKNSLITMNGYRGLGTKSLKICN 177
Query: 251 AT 252
A
Sbjct: 178 AV 179
>gi|367040559|ref|XP_003650660.1| hypothetical protein THITE_2110364 [Thielavia terrestris NRRL 8126]
gi|346997921|gb|AEO64324.1| hypothetical protein THITE_2110364 [Thielavia terrestris NRRL 8126]
Length = 777
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 135/289 (46%), Gaps = 24/289 (8%)
Query: 58 TQAAAPQAAGVAVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK 117
T A P + A PQ +L++G+L + E L F+ G V +++V R+
Sbjct: 46 TDTAGPTPSSTAPHPQSSA------SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDA 99
Query: 118 QTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIF 177
T + GY ++ + S E+ L+ N T + + R+ W+ ++ T +F
Sbjct: 100 VTRRSLGYAYVNYNSTQDGEKALEELNYTLIKG--RPCRIMWSQRDPALRK--TGQGNVF 155
Query: 178 VGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237
+ +L + + L +TF A + + KV D G +KGYGFV + + +A+ +N
Sbjct: 156 IKNLDVAIDNKALHDTF-AAFGNILSCKVAQDE-NGNSKGYGFVHYETDEAAAQAIKHVN 213
Query: 238 GVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFS 297
G+ + + + +G KK + ++ + N T V+V N++ VT+E RELF+
Sbjct: 214 GMLLNEKKVYVGYHIPKKDRQSKFEEMKA-------NFTNVYVKNINHEVTEEEFRELFA 266
Query: 298 QYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNI 341
+YG++ + + GFV F + A +A+ LNG + GQ +
Sbjct: 267 KYGEVTSSSLARDNEGKSRGFGFVNFTTHASAAKAVEELNGKEFRGQEL 315
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 109/241 (45%), Gaps = 30/241 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G +++ KV ++ + G +GYGF+ + + A + ++
Sbjct: 153 NVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQD-ENGNSKGYGFVHYETDEAAAQAIKH 211
Query: 143 FNG-------------TPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYM 189
NG P + + F A+F ++V ++ +VT+
Sbjct: 212 VNGMLLNEKKVYVGYHIPKKDRQSKFEEMKANF-----------TNVYVKNINHEVTEEE 260
Query: 190 LQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249
+E F A+Y + + D G+++G+GFV F + +A+ E+NG + + +G
Sbjct: 261 FRELF-AKYGEVTSSSLARDN-EGKSRGFGFVNFTTHASAAKAVEELNGKEFRGQELYVG 318
Query: 250 PATNKKTVSASYQNSQVAQSDDDPNN---TTVFVGNLDSIVTDEHLRELFSQYGQLVHVK 306
A K + S A + N +++ NL V D+ LR++FS++G + K
Sbjct: 319 RAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLADDVDDDKLRQMFSEFGPITSAK 378
Query: 307 I 307
+
Sbjct: 379 V 379
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 90/193 (46%), Gaps = 19/193 (9%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+++VG+L VT+ ML E F ++ S +V D +T R+ GY +V + + +A+
Sbjct: 65 SLYVGELDPSVTEAMLFELF-SQIGSVASIRVCRDAVTRRSLGYAYVNYNSTQDGEKALE 123
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
E+N RP RI + + + Q + VF+ NLD + ++ L +
Sbjct: 124 ELNYTLIKGRPCRIMWSQRDPALRKTGQGN-------------VFIKNLDVAIDNKALHD 170
Query: 295 LFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP 349
F+ +G ++ K+ K GFV + A +A++ +NG L + + + +
Sbjct: 171 TFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPK 230
Query: 350 SNKQAQPDPNQWN 362
++Q++ + + N
Sbjct: 231 KDRQSKFEEMKAN 243
>gi|359386152|gb|AEV43365.1| poly A-binding protein 2 [Citrus sinensis]
Length = 652
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 152/305 (49%), Gaps = 38/305 (12%)
Query: 47 QPQAQPPAMWATQAA-APQAAGVAVPPQQQGQPGEIR-----TLWIGDLQYWMDETYLNT 100
Q Q QP A A A +P G+A G G+ R +L++GDL ++++ L
Sbjct: 3 QVQVQPQAPVAVAAQPSPATNGIA----NNGGVGDARQFVSTSLYVGDLDLSVNDSQLYD 58
Query: 101 CFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160
F G+VV+V+V R+ T + GYG++ + + A R L N TP+ NG+ R+ ++
Sbjct: 59 LFNQMGQVVSVRVCRDLSTRRSLGYGYVNYNAAHEATRALDELNFTPL-NGKP-IRIMYS 116
Query: 161 SFGAGEKRDDTPDHT----IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTK 216
RD T + IF+ +L + + L +TF + + + KV D L G+++
Sbjct: 117 Y------RDPTIRKSGAGNIFIKNLDKSIDNKALHDTF-STFGNILSCKVATDSL-GQSR 168
Query: 217 GYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNT 276
GYGFV+F +E A+ ++NG+ + + + +GP K+ ++ ++ NN
Sbjct: 169 GYGFVQFDNEESAKSAIDKLNGMLLNDKQVFVGPFLRKQERESTADKTRF-------NN- 220
Query: 277 TVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGK-RC-GFVQFADRSCAEEALRML 331
V+V NL T++ L+++F ++G + + GK +C GFV F D A ++ L
Sbjct: 221 -VYVKNLSETTTEDDLKKIFGEFGIITSTAVMRDADGKSKCFGFVNFDDPDDAARSVEAL 279
Query: 332 NGTQL 336
NG +
Sbjct: 280 NGKKF 284
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 139/285 (48%), Gaps = 21/285 (7%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
++I +L +D L+ F+ G +++ KV + GQ GYGF++F + A+ +
Sbjct: 130 IFIKNLDKSIDNKALHDTFSTFGNILSCKVATDS-LGQSRGYGFVQFDNEESAKSAIDKL 188
Query: 144 NGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT----IFVGDLAADVTDYMLQETFRARYP 199
NG + N +Q F F ++R+ T D T ++V +L+ T+ L++ F
Sbjct: 189 NGMLL-NDKQVF---VGPFLRKQERESTADKTRFNNVYVKNLSETTTEDDLKKIFGEFGI 244
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----K 255
T A V+ G++K +GFV F D + R++ +NG + +G A K
Sbjct: 245 ITSTA--VMRDADGKSKCFGFVNFDDPDDAARSVEALNGKKFDDKEWYVGKAQKKYEREM 302
Query: 256 TVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAG-- 310
+ ++ S + ++ D ++V NLD ++D+ L+ELFS++G + K+ P G
Sbjct: 303 ELKGKFEQS-LKETADKFEGLNLYVKNLDDSISDDKLKELFSEFGTITSCKVMRDPNGIS 361
Query: 311 KRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ GFV F+ A +AL +NG + + + ++ + ++A+
Sbjct: 362 RGSGFVAFSTAEEASKALTEMNGKMVVSKPLYVALAQRKEERRAR 406
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 19/196 (9%)
Query: 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 234
+++VGDL V D L + F + +V D T R+ GYG+V + E RA+
Sbjct: 41 SLYVGDLDLSVNDSQLYDLFN-QMGQVVSVRVCRDLSTRRSLGYGYVNYNAAHEATRALD 99
Query: 235 EMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRE 294
E+N + +P+RI SY++ + +S +F+ NLD + ++ L +
Sbjct: 100 ELNFTPLNGKPIRI---------MYSYRDPTIRKS----GAGNIFIKNLDKSIDNKALHD 146
Query: 295 LFSQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSP 349
FS +G ++ K+ + GFVQF + A+ A+ LNG L + + +
Sbjct: 147 TFSTFGNILSCKVATDSLGQSRGYGFVQFDNEESAKSAIDKLNGMLLNDKQVFVGPFLRK 206
Query: 350 SNKQAQPDPNQWNAGY 365
+++ D ++N Y
Sbjct: 207 QERESTADKTRFNNVY 222
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 15/191 (7%)
Query: 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTF 143
+++ +L E L F G + + V+R+ G+ + +GF+ F A R ++
Sbjct: 221 VYVKNLSETTTEDDLKKIFGEFGIITSTAVMRDAD-GKSKCFGFVNFDDPDDAARSVEAL 279
Query: 144 NGTPMPNGE-------QNFRLNWASFGAGEKR-DDTPDH----TIFVGDLAADVTDYMLQ 191
NG + E + + G E+ +T D ++V +L ++D L+
Sbjct: 280 NGKKFDDKEWYVGKAQKKYEREMELKGKFEQSLKETADKFEGLNLYVKNLDDSISDDKLK 339
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
E F + + + KV+ D G ++G GFV F E +A+TEMNG ++P+ + A
Sbjct: 340 ELF-SEFGTITSCKVMRDP-NGISRGSGFVAFSTAEEASKALTEMNGKMVVSKPLYVALA 397
Query: 252 TNKKTVSASYQ 262
K+ A Q
Sbjct: 398 QRKEERRARLQ 408
>gi|417403696|gb|JAA48646.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 660
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 134/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V++++V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N + DE L+ELFSQ+G+ + VK+ P GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + ++ D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEMDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P +V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + MD+ L F+ G+ ++VKV+R+ G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKVIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|449488383|ref|XP_002188190.2| PREDICTED: nucleolysin TIA-1-like, partial [Taeniopygia guttata]
Length = 537
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 152/323 (47%), Gaps = 19/323 (5%)
Query: 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQ 141
+TL++G+L + E + F+ G K+I + T + Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFSEHRHAAAALA 64
Query: 142 TFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPST 201
NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAF-APFGRI 121
Query: 202 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASY 261
A+VV D TG++KGYGFV F ++ + A+ +M G + R +R AT K S
Sbjct: 122 SDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS- 180
Query: 262 QNSQVAQSDDDPNNTTVFVGNLDSIVT--DEHLRELFSQYGQLVHVKIPAGKRCGFVQFA 319
+S P + V + S++ ++ +R+ FS +GQ++ +++ K FV+F+
Sbjct: 181 ----TFESRSGPLSPRVPDEAVQSVLPAPEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFS 236
Query: 320 DRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQGYENYGYAA 379
A A+ +NGT + G ++ WG+ ++ A P P G Y Y +G
Sbjct: 237 SHESAAHAIVSVNGTTIEGHVVKCYWGKETAD-MAGPVPQ----GQLSYPPAYGQWGQWY 291
Query: 380 AAPQDPSMYYGGY--PGYGNYQQ 400
Q G+ P YG Y Q
Sbjct: 292 GGAQLGQYVPNGWQVPAYGVYGQ 314
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 21/183 (11%)
Query: 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 228
D+ P T++VG+L+ DVT+ ++ + F P K K+++D T Y FV F +
Sbjct: 3 DEMPK-TLYVGNLSRDVTEALILQLFSQIGP-CKNCKMIMD--TAGNDPYCFVEFSEHRH 58
Query: 229 QLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVT 288
A+ MNG + +++ AT + Q D N+ VFVG+L +T
Sbjct: 59 AAAALAAMNGRKIMGKEVKVNWATTPSS-----------QKKDTSNHFHVFVGDLSPEIT 107
Query: 289 DEHLRELFSQYGQLVHVKIP------AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
E ++ F+ +G++ ++ K GFV F ++ AE A++ + G LGG+ IR
Sbjct: 108 TEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIR 167
Query: 343 LSW 345
+W
Sbjct: 168 TNW 170
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 271 DDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQFADRSCAE 325
+D T++VGNL VT+ + +LFSQ G + K+ AG C FV+F++ A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFSEHRHAA 60
Query: 326 EALRMLNGTQLGGQNIRLSWGRSPSNKQ 353
AL +NG ++ G+ ++++W +PS+++
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|449302325|gb|EMC98334.1| hypothetical protein BAUCODRAFT_86883 [Baudoinia compniacensis UAMH
10762]
Length = 802
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 132/272 (48%), Gaps = 21/272 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++G+L + E L F+ G+V +++V R+ T + GY ++ + S ER L+
Sbjct: 62 SLYVGELDPSVTEAMLFELFSSVGQVASIRVCRDAVTRRSLGYAYVNYNSANDGERALEE 121
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N T + + R+ W+ ++ T +F+ +L + + L +TF A + +
Sbjct: 122 LNYTLIKG--RPCRIMWSQRDPALRK--TGHGNVFIKNLDGAIDNKALHDTF-AAFGNIL 176
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KV +D L G +KGYGFV + +A+ +NG+ + + + +G KK + ++
Sbjct: 177 SCKVAVDEL-GNSKGYGFVHYETAEAASQAIKSVNGMLLNEKKVFVGHHIPKKDRMSKFE 235
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC------GFV 316
+ N T ++V N+++ VTD+ RELF +YG++ + GFV
Sbjct: 236 EMKA-------NFTNIYVKNIETEVTDDEFRELFEKYGEITSASLAHDNETGKSRGFGFV 288
Query: 317 QFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
+ + A +A+ LN + GQ +L GR+
Sbjct: 289 NYINHEDAYKAVDELNDSDFHGQ--KLYVGRA 318
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 104/239 (43%), Gaps = 25/239 (10%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G +++ KV + + G +GYGF+ + + A + +++
Sbjct: 150 NVFIKNLDGAIDNKALHDTFAAFGNILSCKVAVD-ELGNSKGYGFVHYETAEAASQAIKS 208
Query: 143 FNGTPMPNGEQNFRLNWASFGAGE---KRDDTPDH--------TIFVGDLAADVTDYMLQ 191
NG LN G K+D I+V ++ +VTD +
Sbjct: 209 VNG---------MLLNEKKVFVGHHIPKKDRMSKFEEMKANFTNIYVKNIETEVTDDEFR 259
Query: 192 ETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251
E F +Y A + D TG+++G+GFV + + + +A+ E+N + + +G A
Sbjct: 260 ELFE-KYGEITSASLAHDNETGKSRGFGFVNYINHEDAYKAVDELNDSDFHGQKLYVGRA 318
Query: 252 TNKKTVSASYQNSQVAQSDDDP---NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 307
K + A + ++V NL V DE LR++F YG + K+
Sbjct: 319 QKKHEREEELRKQYEAARQEKSAKYQGVNLYVKNLADEVDDEELRKIFEAYGAITSAKV 377
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 256 TVSASYQN----SQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---P 308
++S+ Y + + A S PN+ +++VG LD VT+ L ELFS GQ+ +++
Sbjct: 37 SMSSEYNDMPTPTSAAPSTAHPNSASLYVGELDPSVTEAMLFELFSSVGQVASIRVCRDA 96
Query: 309 AGKRC---GFVQFADRSCAEEALRMLNGTQLGGQNIRLSWG-RSPS 350
+R +V + + E AL LN T + G+ R+ W R P+
Sbjct: 97 VTRRSLGYAYVNYNSANDGERALEELNYTLIKGRPCRIMWSQRDPA 142
>gi|212540254|ref|XP_002150282.1| polyadenylate-binding protein [Talaromyces marneffei ATCC 18224]
gi|210067581|gb|EEA21673.1| polyadenylate-binding protein [Talaromyces marneffei ATCC 18224]
Length = 748
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 131/271 (48%), Gaps = 20/271 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++G+L + E L F+ G+V +++V R+ T + GY ++ + + A ER L+
Sbjct: 51 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 110
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N T + + R+ W+ ++ T +F+ +L + + L +TF A + +
Sbjct: 111 LNYTLIKG--RPCRIMWSQRDPALRK--TGQGNVFIKNLDTAIDNKALHDTF-AAFGNIL 165
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KV D G +KGYGFV + A+ +NG+ + + + +G +KK + ++
Sbjct: 166 SCKVAQDEF-GNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFE 224
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP---AGKR--CGFVQ 317
+ N T V+V N+D VTDE RELF ++G + I +GK GFV
Sbjct: 225 EMKA-------NFTNVYVKNIDPEVTDEEFRELFGKFGDITSATISRDDSGKSRGFGFVN 277
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
+ D A+ A+ LN GQ +L GR+
Sbjct: 278 YVDHENAQTAVDDLNDKDFHGQ--KLYVGRA 306
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 112/237 (47%), Gaps = 22/237 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L+ FA G +++ KV ++ + G +GYGF+ + + A ++
Sbjct: 139 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKH 197
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH--------TIFVGDLAADVTDYMLQETF 194
NG + N ++ F + S K+D ++V ++ +VTD +E F
Sbjct: 198 VNGMLL-NDKKVFVGHHIS-----KKDRQSKFEEMKANFTNVYVKNIDPEVTDEEFRELF 251
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
++ A + D +G+++G+GFV + D A+ ++N + + +G A K
Sbjct: 252 -GKFGDITSATISRDD-SGKSRGFGFVNYVDHENAQTAVDDLNDKDFHGQKLYVGRAQKK 309
Query: 255 ----KTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI 307
+ + Y+ +++ ++ ++V NL V DE LRELFS +G + K+
Sbjct: 310 HEREEELRRQYEAARLEKASK-YQGVNLYVKNLTDDVDDEKLRELFSAFGTITSAKV 365
>gi|301790633|ref|XP_002930398.1| PREDICTED: polyadenylate-binding protein 4-like [Ailuropoda
melanoleuca]
Length = 644
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 134/278 (48%), Gaps = 19/278 (6%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL + E L F+ G V+++ V R+ T + GY ++ F A AER L T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIWVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N + + R+ W+ ++ + +F+ +L + + L +TF A + +
Sbjct: 72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVGN--VFIKNLDKSIDNKALYDTFSA-FGNIL 126
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KVV D +KGY FV F + +A+ +MNG+ + R + +G ++K A
Sbjct: 127 SCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL- 183
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKI---PAGKR--CGFVQ 317
T V++ N V DE L+ELFSQ+G+ + VK+ P+GK GFV
Sbjct: 184 ------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVS 237
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
+ A +A+ +NG ++ G+ I + + +QA+
Sbjct: 238 YEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAE 275
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 21/288 (7%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
+ ++I +L +D L F+ G +++ KV+ ++ + GY F+ F ++ A++ +
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155
Query: 141 QTFNGTPMPNGE------QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETF 194
+ NG + + + ++ + A GA K +++ + +V D L+E F
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN----VYIKNFGEEVDDESLKELF 211
Query: 195 RARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254
+++ T KV+ D +G++KG+GFV + + +A+ EMNG S + + +G A K
Sbjct: 212 -SQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 255 KTVSASYQNS--QVAQSDDDP-NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-- 309
A + Q+ Q +++ NLD + DE LR+ FS +G + K+
Sbjct: 270 VERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Query: 310 --GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ +NG +G + + ++ + ++A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAH 377
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 28/193 (14%)
Query: 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLR 231
P +++VGDL +DVT+ ML E F P V D +T R+ GY +V F ++ R
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGP-VLSIWVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 232 AMTEMNGVFCSTRPMRI-----GPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSI 286
A+ MN +P+RI P+ K V VF+ NLD
Sbjct: 68 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG------------------NVFIKNLDKS 109
Query: 287 VTDEHLRELFSQYGQLVHVKIPA----GKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
+ ++ L + FS +G ++ K+ K FV F + A++A+ +NG L + +
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 343 LSWGRSPSNKQAQ 355
+ +S ++A+
Sbjct: 170 VGRFKSRKEREAE 182
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139
E ++I + +D+ L F+ G+ ++VKV+R+ +G+ +G+GF+ + A +
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKA 247
Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH-------------------TIFVGD 180
++ NG + +G+ F G +K+ + +++ +
Sbjct: 248 VEEMNGKEI-SGKVIF------VGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 181 LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240
L + D L++ F + + S AKV+++ GR+KG+GFV F E +A+TEMNG
Sbjct: 301 LDDTIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 241 CSTRPMRIGPATNKKTVSASYQN 263
++P+ + A K+ A N
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTN 380
>gi|255556766|ref|XP_002519416.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223541279|gb|EEF42830.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 632
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 132/263 (50%), Gaps = 22/263 (8%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++G+L + + L F+ + +V+V R+ TG+ YG++ FIS A R ++T
Sbjct: 14 SLYVGELHCDVSDGQLVDAFSEFNTLASVRVCRDSSTGRSLCYGYVNFISPEDAIRAIET 73
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ NG+ R+ W+ +R+ + ++V +L+ + + LQE F + +
Sbjct: 74 KNHTPL-NGKL-MRVMWSHRDPDARRNGIGN--VYVKNLSESIDNVGLQELF-GEFGTVL 128
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
KV G++KG+GFV+F E A+ ++NG + + +G K
Sbjct: 129 SCKVATFE-DGKSKGHGFVQFESEDSANSAIEKLNGSIVGDKQIYVGKFVKK-------- 179
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRC------GFV 316
S D T ++V NLD +T+E L+E FS++G++V V I A C GFV
Sbjct: 180 -SDRVLPSPDAKYTNLYVKNLDPGITEELLQEKFSEFGKIVSVAI-ARDECGSSRGFGFV 237
Query: 317 QFADRSCAEEALRMLNGTQLGGQ 339
F + A A+ +NGT+LG +
Sbjct: 238 NFENPDDARWAMERMNGTELGSK 260
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 125/269 (46%), Gaps = 27/269 (10%)
Query: 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVL 140
I +++ +L +D L F G V++ KV + G+ +G+GF++F S A +
Sbjct: 100 IGNVYVKNLSESIDNVGLQELFGEFGTVLSCKVA-TFEDGKSKGHGFVQFESEDSANSAI 158
Query: 141 QTFNGTPMPNGEQNFRLNWASFGAGEKRDD----TPD---HTIFVGDLAADVTDYMLQET 193
+ NG+ + G++ + G K+ D +PD ++V +L +T+ +LQE
Sbjct: 159 EKLNGSIV--GDKQIYV-----GKFVKKSDRVLPSPDAKYTNLYVKNLDPGITEELLQEK 211
Query: 194 FRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253
F + + + D G ++G+GFV F + + AM MNG ++ + +G A
Sbjct: 212 F-SEFGKIVSVAIARDE-CGSSRGFGFVNFENPDDARWAMERMNGTELGSKVLYVGRAQK 269
Query: 254 K----KTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA 309
+ + + ++ + Q + V+V N+D VTDE LRE FSQ G + K+
Sbjct: 270 RAEREQILRRQFEEKRKEQITK-FKGSNVYVKNIDDDVTDEELREHFSQCGTITSAKLMK 328
Query: 310 -----GKRCGFVQFADRSCAEEALRMLNG 333
K GFV F+ A +A+ +G
Sbjct: 329 DDKGRSKGFGFVCFSSSEEASKAVNTFHG 357
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 29/181 (16%)
Query: 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQL 230
T +++VG+L DV+D L + F + + + +V D TGR+ YG+V F + +
Sbjct: 10 TATASLYVGELHCDVSDGQLVDAF-SEFNTLASVRVCRDSSTGRSLCYGYVNFISPEDAI 68
Query: 231 RAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNT-----TVFVGNLDS 285
RA+ N + + MR V S DP+ V+V NL
Sbjct: 69 RAIETKNHTPLNGKLMR------------------VMWSHRDPDARRNGIGNVYVKNLSE 110
Query: 286 IVTDEHLRELFSQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALRMLNGTQLGGQN 340
+ + L+ELF ++G ++ K+ K GFVQF A A+ LNG+ +G +
Sbjct: 111 SIDNVGLQELFGEFGTVLSCKVATFEDGKSKGHGFVQFESEDSANSAIEKLNGSIVGDKQ 170
Query: 341 I 341
I
Sbjct: 171 I 171
>gi|218192545|gb|EEC74972.1| hypothetical protein OsI_11001 [Oryza sativa Indica Group]
Length = 647
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 143/311 (45%), Gaps = 22/311 (7%)
Query: 49 QAQPPAMWATQAAAPQAAGV-AVPPQQQGQPGEIRTLWIGDLQYWMDETYLNTCFAHTGE 107
Q M A A AP A V AVP G + L++GDL + E +L F G
Sbjct: 4 QEMEVMMVAMAAEAPVAVEVEAVPAAAGGLNATVPALYVGDLHESVREEHLLEVFGKIGT 63
Query: 108 VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEK 167
+ +V+V R+ T YG++ ++S+A A L+ N + + ++ R+ W++ +
Sbjct: 64 LTSVRVCRDNATSNSLRYGYVNYLSQADAAIALEKLNHSLIL--DKPIRVMWSNRDPDAR 121
Query: 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDES 227
R + +FV +L V + LQE F ++ KV + G ++GYGFV+F +
Sbjct: 122 RSGVGN--VFVKNLNDLVDNVSLQELF-CKFGDILSCKVAKNE-DGTSRGYGFVQFALQE 177
Query: 228 EQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIV 287
++ +N R + + K S +++D T +++ NLD +
Sbjct: 178 SADASIQNLNNSHFCGRQLHVATFIKKSERS----------TNNDDKYTNLYMKNLDDDI 227
Query: 288 TDEHLRELFSQYGQLVHVKIP-----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIR 342
T+E ++ FSQYG ++ VKI K GFV F + A+ A +NG LG + +
Sbjct: 228 TEELIKLKFSQYGLVISVKIMKRDDGTSKGFGFVSFQNPESAKRAKESMNGMLLGSKTLY 287
Query: 343 LSWGRSPSNKQ 353
++ + + ++
Sbjct: 288 VARAQKKAERK 298
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 136/288 (47%), Gaps = 26/288 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+++ +L +D L F G++++ KV +N + G GYGF++F + A+ +Q
Sbjct: 127 NVFVKNLNDLVDNVSLQELFCKFGDILSCKVAKN-EDGTSRGYGFVQFALQESADASIQN 185
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDH---TIFVGDLAADVTDYMLQETFRARYP 199
N + G Q L+ A+F +R D +++ +L D+T+ +++ F ++Y
Sbjct: 186 LNNSHFC-GRQ---LHVATFIKKSERSTNNDDKYTNLYMKNLDDDITEELIKLKF-SQYG 240
Query: 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK----- 254
K+ + R G +KG+GFV F + RA MNG+ ++ + + A K
Sbjct: 241 LVISVKI-MKRDDGTSKGFGFVSFQNPESAKRAKESMNGMLLGSKTLYVARAQKKAERKQ 299
Query: 255 --KTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP---- 308
+ + +N + +S N + V++ N++ V D+ LRE F+++G + KI
Sbjct: 300 YLQCLHEEKRNEIITKS----NGSNVYIKNINDEVGDDALRERFNEFGNITSAKIMRDEK 355
Query: 309 -AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV + A+ A+ + G G+ + ++ + ++A+
Sbjct: 356 GISKGFGFVCYNTPEEAKCAVSNMRGVMFYGKPLYVAIAQRKEERRAK 403
>gi|172092|gb|AAA34838.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
Length = 577
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 138/271 (50%), Gaps = 20/271 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL+ + E +L F+ G V +++V R+ T GY ++ F + ++
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ + R+ W+ ++ + + IF+ +L D+ + L +TF +
Sbjct: 99 LNYTPIKG--RLCRIMWSQRDPSLRKKGSGN--IFIKNLHPDIDNKALYDTFSV-FGDIL 153
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
+K+ D G++KG+GFV F +E A+ +NG+ + + + + P ++K +
Sbjct: 154 SSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKE-----R 207
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG-----KRCGFVQ 317
+SQ+ ++ + T ++V N++S TDE +ELF+++G +V + K GFV
Sbjct: 208 DSQLEET--KAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVN 265
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
+ A +A+ LN ++L G+ +L GR+
Sbjct: 266 YEKHEDAVKAVEALNDSELNGE--KLYVGRA 294
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 135/291 (46%), Gaps = 29/291 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L F+ G++++ K+ + + G+ +G+GF+ F A+ +
Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDA 185
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT------IFVGDLAADVTDYMLQETFRA 196
NG + NG++ + A + ++RD + T ++V ++ ++ TD QE F A
Sbjct: 186 LNGMLL-NGQEIY---VAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELF-A 240
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK-- 254
++ A + D G+ KG+GFV + + ++A+ +N + + +G A K
Sbjct: 241 KFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNE 299
Query: 255 -----KTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP- 308
K +Y+ ++A+ +FV NLD V DE L E F+ YG + K+
Sbjct: 300 RMHVLKKQYEAYRLEKMAKY----QGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMR 355
Query: 309 ----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ N + G+ + ++ + +++Q
Sbjct: 356 TENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQ 406
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 29/206 (14%)
Query: 160 ASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYG 219
A+ G+ + + +++VGDL V++ L + F + S +V D +T + GY
Sbjct: 24 AATGSESQSVENSSASLYVGDLEPSVSEAHLYDIF-SPIGSVSSIRVCRDAITKTSLGYA 82
Query: 220 FVRFGDESEQLRAMTEMN-----GVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPN 274
+V F D +A+ ++N G C + P+ KK
Sbjct: 83 YVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKK------------------G 124
Query: 275 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALR 329
+ +F+ NL + ++ L + FS +G ++ KI K GFV F + A+EA+
Sbjct: 125 SGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAID 184
Query: 330 MLNGTQLGGQNIRLSWGRSPSNKQAQ 355
LNG L GQ I ++ S + +Q
Sbjct: 185 ALNGMLLNGQEIYVAPHLSRKERDSQ 210
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
L++ ++ + FA G +V+ + ++ G+++G+GF+ + A + ++
Sbjct: 220 NLYVKNINSETTDEQFQELFAKFGPIVSASLEKDAD-GKLKGFGFVNYEKHEDAVKAVEA 278
Query: 143 FNGTPMPNGEQ---------NFRLN-----WASFGAGEKRDDTPDHTIFVGDLAADVTDY 188
N + + NGE+ N R++ + ++ EK +FV +L V D
Sbjct: 279 LNDSEL-NGEKLYVGRAQKKNERMHVLKKQYEAYRL-EKMAKYQGVNLFVKNLDDSVDDE 336
Query: 189 MLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248
L+E F A Y + AKV+ G++KG+GFV F E +A+TE N + +P+ +
Sbjct: 337 KLEEEF-APYGTITSAKVMRTE-NGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYV 394
Query: 249 GPATNKKTVSASYQNSQVAQ 268
A K + SQ+AQ
Sbjct: 395 AIAQRKDV-----RRSQLAQ 409
>gi|6321013|ref|NP_011092.1| Pab1p [Saccharomyces cerevisiae S288c]
gi|417441|sp|P04147.4|PABP_YEAST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=ARS consensus-binding protein ACBP-67;
AltName: Full=Polyadenylate tail-binding protein
gi|171967|gb|AAA34787.1| poly (A)-binding protein [Saccharomyces cerevisiae]
gi|218386|dbj|BAA00017.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|603406|gb|AAB64692.1| Pab1p: polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|51013159|gb|AAT92873.1| YER165W [Saccharomyces cerevisiae]
gi|151944882|gb|EDN63141.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|207345803|gb|EDZ72507.1| YER165Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146093|emb|CAY79353.1| Pab1p [Saccharomyces cerevisiae EC1118]
gi|285811799|tpg|DAA07827.1| TPA: Pab1p [Saccharomyces cerevisiae S288c]
gi|365765943|gb|EHN07446.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299869|gb|EIW10961.1| Pab1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 577
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 138/271 (50%), Gaps = 20/271 (7%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
+L++GDL+ + E +L F+ G V +++V R+ T GY ++ F + ++
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTK 202
N TP+ + R+ W+ ++ + + IF+ +L D+ + L +TF +
Sbjct: 99 LNYTPIKG--RLCRIMWSQRDPSLRKKGSGN--IFIKNLHPDIDNKALYDTFSV-FGDIL 153
Query: 203 GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVSASYQ 262
+K+ D G++KG+GFV F +E A+ +NG+ + + + + P ++K +
Sbjct: 154 SSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKE-----R 207
Query: 263 NSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAG-----KRCGFVQ 317
+SQ+ ++ + T ++V N++S TDE +ELF+++G +V + K GFV
Sbjct: 208 DSQLEET--KAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVN 265
Query: 318 FADRSCAEEALRMLNGTQLGGQNIRLSWGRS 348
+ A +A+ LN ++L G+ +L GR+
Sbjct: 266 YEKHEDAVKAVEALNDSELNGE--KLYVGRA 294
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 135/291 (46%), Gaps = 29/291 (9%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
++I +L +D L F+ G++++ K+ + + G+ +G+GF+ F A+ +
Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDA 185
Query: 143 FNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHT------IFVGDLAADVTDYMLQETFRA 196
NG + NG++ + A + ++RD + T ++V ++ ++ TD QE F A
Sbjct: 186 LNGMLL-NGQEIY---VAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELF-A 240
Query: 197 RYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK-- 254
++ A + D G+ KG+GFV + + ++A+ +N + + +G A K
Sbjct: 241 KFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNE 299
Query: 255 -----KTVSASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIP- 308
K +Y+ ++A+ +FV NLD V DE L E F+ YG + K+
Sbjct: 300 RMHVLKKQYEAYRLEKMAKY----QGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMR 355
Query: 309 ----AGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQ 355
K GFV F+ A +A+ N + G+ + ++ + +++Q
Sbjct: 356 TENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQ 406
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 29/206 (14%)
Query: 160 ASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYG 219
A+ G+ + + +++VGDL V++ L + F + S +V D +T + GY
Sbjct: 24 AATGSESQSVENSSASLYVGDLEPSVSEAHLYDIF-SPIGSVSSIRVCRDAITKTSLGYA 82
Query: 220 FVRFGDESEQLRAMTEMN-----GVFCSTRPMRIGPATNKKTVSASYQNSQVAQSDDDPN 274
+V F D +A+ ++N G C + P+ KK
Sbjct: 83 YVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKK------------------G 124
Query: 275 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPA-----GKRCGFVQFADRSCAEEALR 329
+ +F+ NL + ++ L + FS +G ++ KI K GFV F + A+EA+
Sbjct: 125 SGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAID 184
Query: 330 MLNGTQLGGQNIRLSWGRSPSNKQAQ 355
LNG L GQ I ++ S + +Q
Sbjct: 185 ALNGMLLNGQEIYVAPHLSRKERDSQ 210
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT 142
L++ ++ + FA G +V+ + ++ G+++G+GF+ + A + ++
Sbjct: 220 NLYVKNINSETTDEQFQELFAKFGPIVSASLEKDAD-GKLKGFGFVNYEKHEDAVKAVEA 278
Query: 143 FNGTPMPNGEQ---------NFRLN-----WASFGAGEKRDDTPDHTIFVGDLAADVTDY 188
N + + NGE+ N R++ + ++ EK +FV +L V D
Sbjct: 279 LNDSEL-NGEKLYVGRAQKKNERMHVLKKQYEAYRL-EKMAKYQGVNLFVKNLDDSVDDE 336
Query: 189 MLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248
L+E F A Y + AKV+ G++KG+GFV F E +A+TE N + +P+ +
Sbjct: 337 KLEEEF-APYGTITSAKVMRTE-NGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYV 394
Query: 249 GPATNKKTVSASYQNSQVAQ 268
A K + SQ+AQ
Sbjct: 395 AIAQRKDV-----RRSQLAQ 409
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.133 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,675,736,030
Number of Sequences: 23463169
Number of extensions: 366951158
Number of successful extensions: 3647937
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13866
Number of HSP's successfully gapped in prelim test: 30498
Number of HSP's that attempted gapping in prelim test: 2896593
Number of HSP's gapped (non-prelim): 467441
length of query: 406
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 261
effective length of database: 8,957,035,862
effective search space: 2337786359982
effective search space used: 2337786359982
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)