Query 015455
Match_columns 406
No_of_seqs 379 out of 3047
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 06:28:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015455.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015455hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0600 Cdc2-related protein k 100.0 1.8E-71 3.9E-76 520.6 27.2 326 78-403 79-404 (560)
2 KOG0593 Predicted protein kina 100.0 8.6E-61 1.9E-65 422.8 18.1 287 115-406 1-291 (396)
3 KOG0661 MAPK related serine/th 100.0 1E-60 2.2E-65 445.2 14.2 287 114-404 8-296 (538)
4 KOG0659 Cdk activating kinase 100.0 2.5E-59 5.4E-64 406.9 20.4 283 116-404 2-286 (318)
5 KOG0663 Protein kinase PITSLRE 100.0 3.9E-59 8.4E-64 417.3 19.9 289 114-404 74-366 (419)
6 KOG0615 Serine/threonine prote 100.0 1.9E-59 4E-64 429.9 14.1 261 115-404 171-442 (475)
7 KOG0598 Ribosomal protein S6 k 100.0 1.3E-58 2.9E-63 421.1 19.5 259 115-405 24-287 (357)
8 KOG0575 Polo-like serine/threo 100.0 1.2E-57 2.7E-62 437.3 23.3 255 116-403 18-273 (592)
9 KOG0581 Mitogen-activated prot 100.0 1E-57 2.2E-62 415.5 19.8 257 116-405 79-341 (364)
10 KOG0660 Mitogen-activated prot 100.0 2.2E-56 4.8E-61 405.1 18.2 289 116-405 22-316 (359)
11 KOG0594 Protein kinase PCTAIRE 100.0 7.3E-55 1.6E-59 396.3 23.5 290 115-405 10-308 (323)
12 KOG0616 cAMP-dependent protein 100.0 1.2E-55 2.6E-60 389.3 17.4 255 115-405 43-303 (355)
13 KOG0658 Glycogen synthase kina 100.0 1E-55 2.2E-60 401.4 16.7 281 116-405 24-312 (364)
14 KOG0592 3-phosphoinositide-dep 100.0 1.7E-55 3.8E-60 416.2 18.6 260 114-405 71-344 (604)
15 KOG0605 NDR and related serine 100.0 5.6E-55 1.2E-59 412.9 21.4 263 114-405 139-451 (550)
16 KOG0595 Serine/threonine-prote 100.0 1.3E-53 2.7E-58 391.9 22.1 262 111-403 5-272 (429)
17 KOG0591 NIMA (never in mitosis 100.0 3.9E-55 8.5E-60 383.3 7.7 249 116-393 19-275 (375)
18 KOG0694 Serine/threonine prote 100.0 1.5E-52 3.2E-57 406.8 21.2 259 113-405 365-630 (694)
19 KOG0033 Ca2+/calmodulin-depend 100.0 1.2E-54 2.6E-59 373.4 5.7 260 115-404 10-272 (355)
20 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.6E-51 3.4E-56 386.7 26.5 284 115-402 4-288 (288)
21 KOG0583 Serine/threonine prote 100.0 9.5E-52 2.1E-56 396.5 23.6 257 115-404 16-280 (370)
22 cd07848 STKc_CDKL5 Catalytic d 100.0 8E-51 1.7E-55 381.4 26.7 284 116-402 1-287 (287)
23 KOG0585 Ca2+/calmodulin-depend 100.0 4.5E-52 9.8E-57 387.0 17.6 264 115-405 96-378 (576)
24 KOG0610 Putative serine/threon 100.0 1.7E-51 3.8E-56 377.9 20.3 262 114-405 75-398 (459)
25 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.7E-50 3.7E-55 382.4 26.2 287 115-405 4-294 (303)
26 KOG0597 Serine-threonine prote 100.0 5.4E-52 1.2E-56 393.1 14.8 257 115-405 1-257 (808)
27 PTZ00036 glycogen synthase kin 100.0 3.1E-50 6.6E-55 398.9 26.8 282 116-405 66-357 (440)
28 KOG0588 Serine/threonine prote 100.0 2.3E-51 5E-56 395.7 18.2 257 116-405 12-269 (786)
29 KOG0198 MEKK and related serin 100.0 2.2E-51 4.8E-56 379.6 17.2 260 116-404 17-281 (313)
30 KOG0662 Cyclin-dependent kinas 100.0 5.6E-51 1.2E-55 335.8 17.0 286 116-405 2-289 (292)
31 KOG0582 Ste20-like serine/thre 100.0 1.9E-50 4.2E-55 373.9 21.6 269 115-405 25-299 (516)
32 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1E-49 2.2E-54 382.6 25.8 288 117-405 1-296 (338)
33 KOG0667 Dual-specificity tyros 100.0 2.8E-50 6E-55 390.6 21.7 278 117-404 187-507 (586)
34 KOG0599 Phosphorylase kinase g 100.0 2.1E-51 4.5E-56 358.5 11.7 261 116-405 17-289 (411)
35 cd07862 STKc_CDK6 Catalytic do 100.0 2.7E-49 5.7E-54 371.6 27.0 281 116-402 1-290 (290)
36 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.8E-49 6.1E-54 375.1 25.9 287 115-405 5-292 (309)
37 KOG0578 p21-activated serine/t 100.0 1.8E-50 3.8E-55 385.1 16.8 256 116-404 273-528 (550)
38 cd07853 STKc_NLK Catalytic dom 100.0 3.9E-49 8.4E-54 383.8 24.8 287 117-404 1-293 (372)
39 cd07876 STKc_JNK2 Catalytic do 100.0 7.4E-49 1.6E-53 380.1 25.6 285 115-405 20-321 (359)
40 cd05612 STKc_PRKX_like Catalyt 100.0 2.2E-49 4.8E-54 372.7 20.8 254 116-405 1-260 (291)
41 PTZ00263 protein kinase A cata 100.0 3.5E-49 7.7E-54 377.7 21.0 254 115-404 17-276 (329)
42 cd07863 STKc_CDK4 Catalytic do 100.0 2.8E-48 6.1E-53 364.2 26.5 280 117-402 1-288 (288)
43 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.6E-48 5.6E-53 367.1 26.3 287 115-405 5-292 (301)
44 KOG0032 Ca2+/calmodulin-depend 100.0 7.3E-49 1.6E-53 376.4 22.6 257 116-404 35-298 (382)
45 cd05571 STKc_PKB Catalytic dom 100.0 4.3E-49 9.4E-54 376.2 20.5 250 122-404 1-256 (323)
46 PHA03212 serine/threonine kina 100.0 9.1E-49 2E-53 382.7 22.8 279 115-405 91-382 (391)
47 cd07875 STKc_JNK1 Catalytic do 100.0 1.9E-48 4.2E-53 377.9 24.7 285 115-405 23-324 (364)
48 KOG0580 Serine/threonine prote 100.0 7.1E-50 1.5E-54 343.1 12.1 255 115-404 21-278 (281)
49 cd07839 STKc_CDK5 Catalytic do 100.0 2.8E-48 6E-53 363.5 24.0 282 117-402 1-284 (284)
50 cd07861 STKc_CDK1_euk Catalyti 100.0 4.7E-48 1E-52 362.0 25.4 283 117-402 1-285 (285)
51 cd07874 STKc_JNK3 Catalytic do 100.0 2.6E-48 5.6E-53 375.7 24.3 285 115-405 16-317 (355)
52 KOG0192 Tyrosine kinase specif 100.0 2.2E-48 4.8E-53 370.1 23.2 252 116-398 41-298 (362)
53 cd05631 STKc_GRK4 Catalytic do 100.0 3E-48 6.4E-53 363.9 23.4 259 117-405 1-267 (285)
54 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.8E-48 6E-53 373.7 23.4 284 116-405 15-304 (343)
55 KOG0201 Serine/threonine prote 100.0 1.7E-50 3.7E-55 374.0 7.2 256 116-404 13-268 (467)
56 PTZ00426 cAMP-dependent protei 100.0 1.4E-48 3E-53 375.0 20.5 254 115-404 29-289 (340)
57 cd07845 STKc_CDK10 Catalytic d 100.0 9.6E-48 2.1E-52 364.5 25.7 288 115-404 6-295 (309)
58 cd07868 STKc_CDK8 Catalytic do 100.0 1.4E-47 3E-52 364.7 26.8 278 121-402 6-317 (317)
59 KOG0197 Tyrosine kinases [Sign 100.0 7.8E-49 1.7E-53 372.8 17.8 247 116-397 206-455 (468)
60 cd05628 STKc_NDR1 Catalytic do 100.0 4E-48 8.6E-53 375.5 22.9 261 116-405 1-299 (363)
61 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3E-48 6.4E-53 372.0 21.4 262 116-405 1-263 (333)
62 cd05585 STKc_YPK1_like Catalyt 100.0 3.4E-48 7.3E-53 368.3 21.6 249 124-405 1-253 (312)
63 cd05599 STKc_NDR_like Catalyti 100.0 3.8E-48 8.2E-53 375.8 21.1 260 116-404 1-301 (364)
64 cd05626 STKc_LATS2 Catalytic d 100.0 7.6E-48 1.7E-52 375.8 23.0 261 117-405 2-311 (381)
65 KOG0666 Cyclin C-dependent kin 100.0 8.5E-49 1.8E-53 347.7 14.6 288 116-404 24-342 (438)
66 cd05595 STKc_PKB_beta Catalyti 100.0 6.2E-48 1.3E-52 368.2 21.7 250 122-404 1-256 (323)
67 KOG0611 Predicted serine/threo 100.0 9.3E-49 2E-53 358.2 15.2 254 116-403 53-307 (668)
68 KOG0690 Serine/threonine prote 100.0 4.7E-49 1E-53 351.3 12.3 260 113-405 165-430 (516)
69 KOG0589 Serine/threonine prote 100.0 1.4E-48 3.1E-53 369.8 16.2 260 115-405 3-264 (426)
70 cd05593 STKc_PKB_gamma Catalyt 100.0 7.5E-48 1.6E-52 368.4 21.4 250 122-404 1-256 (328)
71 cd05573 STKc_ROCK_NDR_like Cat 100.0 5.3E-48 1.1E-52 372.6 19.0 261 116-405 1-291 (350)
72 cd05587 STKc_cPKC Catalytic do 100.0 2.4E-47 5.1E-52 364.4 22.5 255 117-404 1-262 (324)
73 cd05629 STKc_NDR_like_fungal C 100.0 9.9E-48 2.1E-52 374.6 20.3 260 116-404 1-310 (377)
74 cd05590 STKc_nPKC_eta Catalyti 100.0 1.5E-47 3.2E-52 365.2 20.9 251 122-405 1-259 (320)
75 PTZ00284 protein kinase; Provi 100.0 3.1E-47 6.7E-52 381.0 24.2 280 115-405 128-444 (467)
76 cd07832 STKc_CCRK Catalytic do 100.0 1.6E-46 3.5E-51 351.6 27.5 285 117-403 1-286 (286)
77 cd05625 STKc_LATS1 Catalytic d 100.0 1.5E-47 3.2E-52 374.0 21.2 259 117-404 2-310 (382)
78 cd05596 STKc_ROCK Catalytic do 100.0 1.8E-47 3.8E-52 371.6 21.2 262 115-404 42-309 (370)
79 cd05589 STKc_PKN Catalytic dom 100.0 4.1E-47 8.8E-52 362.8 23.0 253 118-404 1-262 (324)
80 cd05614 STKc_MSK2_N N-terminal 100.0 2.6E-47 5.7E-52 365.3 21.7 261 117-404 1-272 (332)
81 cd07843 STKc_CDC2L1 Catalytic 100.0 1.3E-46 2.9E-51 353.9 26.1 286 116-402 5-293 (293)
82 cd05598 STKc_LATS Catalytic do 100.0 1.1E-47 2.3E-52 374.2 18.9 259 117-404 2-306 (376)
83 cd05601 STKc_CRIK Catalytic do 100.0 7.7E-48 1.7E-52 368.7 17.4 261 116-404 1-268 (330)
84 cd05594 STKc_PKB_alpha Catalyt 100.0 1.4E-47 3.1E-52 366.0 18.7 251 122-405 1-258 (325)
85 cd06649 PKc_MEK2 Catalytic dom 100.0 1.3E-46 2.7E-51 360.5 25.1 282 116-404 5-306 (331)
86 cd07864 STKc_CDK12 Catalytic d 100.0 2.2E-46 4.7E-51 353.7 26.2 290 113-402 4-302 (302)
87 cd07860 STKc_CDK2_3 Catalytic 100.0 1E-46 2.3E-51 352.8 23.8 282 117-402 1-284 (284)
88 cd07867 STKc_CDC2L6 Catalytic 100.0 2.5E-46 5.4E-51 355.9 26.5 277 122-402 7-317 (317)
89 cd07831 STKc_MOK Catalytic dom 100.0 3.8E-46 8.2E-51 348.4 27.3 281 118-402 1-282 (282)
90 cd05591 STKc_nPKC_epsilon Cata 100.0 3.8E-47 8.3E-52 362.5 20.8 250 122-404 1-259 (321)
91 cd05621 STKc_ROCK2 Catalytic d 100.0 5.2E-47 1.1E-51 368.1 21.6 262 115-404 42-309 (370)
92 cd05584 STKc_p70S6K Catalytic 100.0 6.2E-47 1.3E-51 361.4 21.7 251 121-404 1-261 (323)
93 cd07847 STKc_CDKL1_4 Catalytic 100.0 8.2E-46 1.8E-50 346.8 28.6 283 116-402 1-286 (286)
94 KOG4717 Serine/threonine prote 100.0 1.2E-47 2.7E-52 359.8 16.0 256 116-404 18-275 (864)
95 cd05616 STKc_cPKC_beta Catalyt 100.0 9.4E-47 2E-51 360.1 22.3 255 117-404 1-262 (323)
96 cd05592 STKc_nPKC_theta_delta 100.0 8.4E-47 1.8E-51 359.3 21.3 250 122-404 1-253 (316)
97 PLN00009 cyclin-dependent kina 100.0 6.9E-46 1.5E-50 349.2 26.6 286 116-405 2-290 (294)
98 cd07866 STKc_BUR1 Catalytic do 100.0 4.9E-46 1.1E-50 352.5 25.8 288 115-402 7-311 (311)
99 KOG0669 Cyclin T-dependent kin 100.0 5.3E-49 1.2E-53 339.8 4.9 289 116-404 17-320 (376)
100 cd07844 STKc_PCTAIRE_like Cata 100.0 8.1E-46 1.8E-50 348.1 26.9 284 115-402 4-291 (291)
101 cd05627 STKc_NDR2 Catalytic do 100.0 6E-47 1.3E-51 366.8 19.8 260 116-404 1-298 (360)
102 cd05597 STKc_DMPK_like Catalyt 100.0 2.3E-46 5E-51 358.6 23.3 263 116-404 1-271 (331)
103 cd05620 STKc_nPKC_delta Cataly 100.0 1.2E-46 2.6E-51 358.3 21.0 250 122-404 1-253 (316)
104 cd05608 STKc_GRK1 Catalytic do 100.0 2.3E-46 5.1E-51 350.2 22.6 253 124-405 1-263 (280)
105 cd07850 STKc_JNK Catalytic dom 100.0 4.6E-46 9.9E-51 359.7 25.3 284 116-405 16-317 (353)
106 cd05570 STKc_PKC Catalytic dom 100.0 1.1E-46 2.4E-51 358.9 20.6 250 122-404 1-257 (318)
107 cd07840 STKc_CDK9_like Catalyt 100.0 9.1E-46 2E-50 346.4 26.1 285 118-402 1-287 (287)
108 cd07836 STKc_Pho85 Catalytic d 100.0 1.2E-45 2.6E-50 345.5 26.9 282 117-402 1-284 (284)
109 cd05575 STKc_SGK Catalytic dom 100.0 1.2E-46 2.6E-51 359.4 19.9 250 122-404 1-256 (323)
110 cd05582 STKc_RSK_N N-terminal 100.0 5.4E-47 1.2E-51 361.0 17.3 251 122-405 2-260 (318)
111 cd05588 STKc_aPKC Catalytic do 100.0 2.1E-46 4.6E-51 358.6 21.1 250 122-404 1-267 (329)
112 cd05622 STKc_ROCK1 Catalytic d 100.0 3E-46 6.5E-51 363.0 22.2 262 115-404 42-309 (371)
113 PHA03209 serine/threonine kina 100.0 4.6E-46 9.9E-51 360.1 23.2 277 116-405 66-357 (357)
114 cd05615 STKc_cPKC_alpha Cataly 100.0 4.5E-46 9.8E-51 355.4 22.7 256 117-405 1-263 (323)
115 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.1E-45 2.4E-50 346.1 24.7 284 116-402 1-286 (286)
116 cd07849 STKc_ERK1_2_like Catal 100.0 1.3E-45 2.8E-50 354.1 25.7 287 116-405 5-298 (336)
117 cd05618 STKc_aPKC_iota Catalyt 100.0 3.3E-46 7.1E-51 357.2 21.4 250 122-404 1-267 (329)
118 cd05605 STKc_GRK4_like Catalyt 100.0 6.1E-46 1.3E-50 348.3 22.7 258 117-404 1-266 (285)
119 cd05619 STKc_nPKC_theta Cataly 100.0 3.8E-46 8.2E-51 354.8 21.5 251 122-405 1-254 (316)
120 cd07841 STKc_CDK7 Catalytic do 100.0 1.9E-45 4.2E-50 346.7 26.1 283 117-404 1-287 (298)
121 cd07865 STKc_CDK9 Catalytic do 100.0 2.2E-45 4.8E-50 347.9 26.6 287 115-402 11-310 (310)
122 cd07837 STKc_CdkB_plant Cataly 100.0 1.6E-45 3.4E-50 346.8 25.3 286 116-403 1-295 (295)
123 PLN00034 mitogen-activated pro 100.0 5.5E-46 1.2E-50 359.1 22.8 257 115-404 73-333 (353)
124 PTZ00283 serine/threonine prot 100.0 7.7E-46 1.7E-50 372.0 24.6 262 115-405 31-303 (496)
125 cd07855 STKc_ERK5 Catalytic do 100.0 5.9E-46 1.3E-50 356.2 22.1 289 116-405 5-300 (334)
126 KOG0986 G protein-coupled rece 100.0 2.5E-47 5.5E-52 353.3 12.1 265 111-405 180-452 (591)
127 cd07835 STKc_CDK1_like Catalyt 100.0 1.9E-45 4.1E-50 344.1 24.8 281 118-402 1-283 (283)
128 cd07833 STKc_CDKL Catalytic do 100.0 4.2E-45 9.2E-50 342.3 27.1 285 116-402 1-288 (288)
129 cd05586 STKc_Sck1_like Catalyt 100.0 1.7E-46 3.7E-51 359.4 17.1 250 124-404 1-258 (330)
130 cd05623 STKc_MRCK_alpha Cataly 100.0 9.5E-46 2.1E-50 354.5 22.0 263 116-404 1-271 (332)
131 cd05604 STKc_SGK3 Catalytic do 100.0 3.5E-46 7.5E-51 356.5 18.5 250 122-404 1-256 (325)
132 PHA03211 serine/threonine kina 100.0 1.4E-45 2.9E-50 365.2 23.3 277 115-404 168-460 (461)
133 cd07870 STKc_PFTAIRE2 Catalyti 100.0 9.3E-45 2E-49 341.0 27.6 283 116-402 5-291 (291)
134 cd06650 PKc_MEK1 Catalytic dom 100.0 3.1E-45 6.7E-50 351.0 24.5 282 116-404 5-304 (333)
135 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.5E-45 5.3E-50 352.4 23.6 288 116-405 5-297 (337)
136 cd05602 STKc_SGK1 Catalytic do 100.0 7.8E-46 1.7E-50 354.1 19.9 250 122-404 1-256 (325)
137 PF00069 Pkinase: Protein kina 100.0 4.1E-46 8.9E-51 343.7 17.4 259 118-402 1-260 (260)
138 cd05624 STKc_MRCK_beta Catalyt 100.0 1.2E-45 2.6E-50 353.7 21.0 263 116-404 1-271 (331)
139 KOG0612 Rho-associated, coiled 100.0 4E-47 8.7E-52 384.4 10.7 262 115-404 74-343 (1317)
140 PHA03207 serine/threonine kina 100.0 1.2E-44 2.5E-49 354.6 27.4 276 116-404 92-380 (392)
141 cd05603 STKc_SGK2 Catalytic do 100.0 1E-45 2.2E-50 352.6 19.4 250 122-404 1-256 (321)
142 cd07852 STKc_MAPK15 Catalytic 100.0 3.7E-45 8E-50 351.1 23.3 289 115-405 6-301 (337)
143 PTZ00267 NIMA-related protein 100.0 7.8E-45 1.7E-49 364.2 26.4 256 116-404 67-328 (478)
144 cd07842 STKc_CDK8_like Catalyt 100.0 8.6E-45 1.9E-49 344.9 25.4 286 117-402 1-316 (316)
145 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.8E-45 6E-50 350.5 21.8 252 122-405 1-266 (327)
146 cd06625 STKc_MEKK3_like Cataly 100.0 9.4E-45 2E-49 335.5 24.5 257 116-402 2-263 (263)
147 cd05630 STKc_GRK6 Catalytic do 100.0 6E-45 1.3E-49 341.6 23.4 259 117-405 1-267 (285)
148 cd07834 STKc_MAPK Catalytic do 100.0 5.1E-45 1.1E-49 349.0 23.0 288 117-405 1-295 (330)
149 PTZ00266 NIMA-related protein 100.0 6.1E-45 1.3E-49 378.1 24.7 261 114-404 11-300 (1021)
150 cd08223 STKc_Nek4 Catalytic do 100.0 2.8E-44 6.1E-49 331.2 25.8 255 117-402 1-257 (257)
151 cd05607 STKc_GRK7 Catalytic do 100.0 9.2E-45 2E-49 338.9 22.6 253 124-405 1-260 (277)
152 cd05632 STKc_GRK5 Catalytic do 100.0 1.7E-44 3.6E-49 338.5 24.1 259 117-405 1-267 (285)
153 cd07851 STKc_p38 Catalytic dom 100.0 8.5E-45 1.9E-49 349.5 22.2 285 115-405 14-304 (343)
154 cd07879 STKc_p38delta_MAPK13 C 100.0 3E-44 6.5E-49 345.5 25.6 283 116-405 15-303 (342)
155 cd07829 STKc_CDK_like Catalyti 100.0 2.4E-44 5.3E-49 336.0 24.0 282 118-402 1-282 (282)
156 cd08227 PK_STRAD_alpha Pseudok 100.0 2E-44 4.4E-49 344.6 23.4 284 120-405 2-313 (327)
157 cd08529 STKc_FA2-like Catalyti 100.0 4.3E-44 9.2E-49 329.6 24.5 254 117-402 1-256 (256)
158 KOG0596 Dual specificity; seri 100.0 1.1E-44 2.4E-49 343.0 20.8 262 112-404 357-632 (677)
159 cd05580 STKc_PKA Catalytic dom 100.0 2.9E-44 6.3E-49 337.6 23.7 254 116-405 1-260 (290)
160 cd05118 STKc_CMGC Catalytic do 100.0 2.5E-44 5.4E-49 336.1 23.1 281 118-402 1-283 (283)
161 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.5E-44 3.3E-49 347.0 22.0 253 116-398 7-329 (338)
162 cd07877 STKc_p38alpha_MAPK14 C 100.0 5.6E-44 1.2E-48 344.0 25.1 284 116-405 17-306 (345)
163 KOG0604 MAP kinase-activated p 100.0 7.6E-46 1.7E-50 327.5 10.9 256 115-405 60-328 (400)
164 cd07880 STKc_p38gamma_MAPK12 C 100.0 9.6E-44 2.1E-48 342.2 26.2 285 115-405 14-304 (343)
165 cd06615 PKc_MEK Catalytic doma 100.0 6.9E-44 1.5E-48 338.1 24.8 280 116-404 1-292 (308)
166 cd06619 PKc_MKK5 Catalytic dom 100.0 6.2E-44 1.3E-48 333.5 24.1 255 116-404 1-258 (279)
167 cd07857 STKc_MPK1 Catalytic do 100.0 9.4E-44 2E-48 340.7 25.5 288 117-405 1-298 (332)
168 cd06644 STKc_STK10_LOK Catalyt 100.0 9.6E-44 2.1E-48 334.4 24.9 259 116-405 12-275 (292)
169 cd06651 STKc_MEKK3 Catalytic d 100.0 8.7E-44 1.9E-48 330.1 24.3 259 116-403 2-265 (266)
170 PTZ00024 cyclin-dependent prot 100.0 1E-43 2.2E-48 340.8 25.4 285 116-405 8-319 (335)
171 cd07854 STKc_MAPK4_6 Catalytic 100.0 5.3E-44 1.1E-48 343.8 23.4 285 116-405 5-306 (342)
172 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.8E-43 3.9E-48 338.1 26.4 283 115-404 9-293 (328)
173 KOG0607 MAP kinase-interacting 100.0 2.6E-45 5.7E-50 326.6 12.6 254 122-404 84-366 (463)
174 cd06643 STKc_SLK Catalytic dom 100.0 1E-43 2.3E-48 332.3 23.9 258 116-404 5-267 (282)
175 cd06611 STKc_SLK_like Catalyti 100.0 6.2E-44 1.4E-48 333.4 22.3 259 116-405 5-268 (280)
176 cd05574 STKc_phototropin_like 100.0 9.9E-44 2.2E-48 338.0 23.8 260 116-405 1-295 (316)
177 cd08217 STKc_Nek2 Catalytic do 100.0 1.3E-43 2.8E-48 327.5 23.9 256 117-402 1-265 (265)
178 KOG0696 Serine/threonine prote 100.0 3.7E-45 8E-50 335.3 13.0 257 115-404 348-611 (683)
179 cd06609 STKc_MST3_like Catalyt 100.0 1.5E-43 3.2E-48 329.9 24.0 255 116-404 1-256 (274)
180 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.5E-43 3.3E-48 331.1 24.1 257 116-404 1-266 (283)
181 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.6E-43 3.4E-48 328.2 23.7 254 118-402 2-267 (267)
182 PHA02988 hypothetical protein; 100.0 1.5E-43 3.2E-48 331.8 23.7 244 122-398 26-274 (283)
183 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1E-43 2.2E-48 333.0 22.5 259 116-405 1-268 (286)
184 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.6E-43 3.4E-48 327.7 23.5 261 116-402 1-267 (267)
185 cd07838 STKc_CDK4_6_like Catal 100.0 4.4E-43 9.5E-48 328.4 26.6 280 118-402 1-287 (287)
186 KOG0577 Serine/threonine prote 100.0 1.8E-45 4E-50 350.0 10.5 254 116-403 26-282 (948)
187 cd06645 STKc_MAP4K3 Catalytic 100.0 9.8E-44 2.1E-48 329.7 21.9 257 116-401 9-267 (267)
188 cd08221 STKc_Nek9 Catalytic do 100.0 4E-43 8.6E-48 323.5 25.6 254 117-402 1-256 (256)
189 cd05609 STKc_MAST Catalytic do 100.0 2.5E-43 5.4E-48 333.7 24.5 260 116-404 1-278 (305)
190 cd06646 STKc_MAP4K5 Catalytic 100.0 9.5E-44 2.1E-48 329.8 21.0 257 116-401 9-267 (267)
191 KOG0983 Mitogen-activated prot 100.0 1.5E-44 3.2E-49 315.7 14.4 261 114-405 90-355 (391)
192 PHA03210 serine/threonine kina 100.0 7.9E-44 1.7E-48 358.3 21.7 283 115-404 147-459 (501)
193 cd06637 STKc_TNIK Catalytic do 100.0 1.9E-43 4.1E-48 328.6 22.6 256 116-402 6-272 (272)
194 cd06655 STKc_PAK2 Catalytic do 100.0 2.6E-43 5.7E-48 332.2 23.8 256 116-404 19-274 (296)
195 cd06654 STKc_PAK1 Catalytic do 100.0 2.7E-43 5.9E-48 332.1 23.6 256 116-404 20-275 (296)
196 KOG0579 Ste20-like serine/thre 100.0 2.1E-45 4.5E-50 351.8 9.2 258 116-404 32-294 (1187)
197 cd08218 STKc_Nek1 Catalytic do 100.0 3.2E-43 6.9E-48 324.1 23.5 254 117-402 1-256 (256)
198 cd06652 STKc_MEKK2 Catalytic d 100.0 4.5E-43 9.8E-48 325.0 24.2 259 116-403 2-265 (265)
199 KOG0574 STE20-like serine/thre 100.0 1.4E-46 3.1E-51 332.2 0.7 255 116-404 33-288 (502)
200 cd06631 STKc_YSK4 Catalytic do 100.0 4.2E-43 9.2E-48 325.1 24.0 256 117-402 1-265 (265)
201 cd06607 STKc_TAO Catalytic dom 100.0 6.7E-43 1.5E-47 331.1 25.6 255 116-404 15-272 (307)
202 KOG0671 LAMMER dual specificit 100.0 1E-44 2.2E-49 330.4 12.4 280 115-405 88-412 (415)
203 cd06608 STKc_myosinIII_like Ca 100.0 3.3E-43 7.2E-48 326.8 22.9 259 114-402 4-275 (275)
204 cd07830 STKc_MAK_like Catalyti 100.0 6.7E-43 1.4E-47 326.7 25.0 280 118-402 1-283 (283)
205 cd08220 STKc_Nek8 Catalytic do 100.0 8.4E-43 1.8E-47 321.0 24.5 253 117-402 1-256 (256)
206 KOG4236 Serine/threonine prote 100.0 4.8E-45 1E-49 343.2 9.6 252 122-405 570-825 (888)
207 cd06639 STKc_myosinIIIB Cataly 100.0 9.9E-43 2.2E-47 327.2 25.4 259 115-403 21-291 (291)
208 cd05064 PTKc_EphR_A10 Catalyti 100.0 3.4E-43 7.4E-48 326.2 21.9 251 116-398 5-260 (266)
209 cd06613 STKc_MAP4K3_like Catal 100.0 6.2E-43 1.3E-47 323.0 23.6 257 116-401 3-262 (262)
210 cd06656 STKc_PAK3 Catalytic do 100.0 2.6E-43 5.6E-48 332.4 21.1 256 116-404 19-274 (297)
211 cd06630 STKc_MEKK1 Catalytic d 100.0 3.8E-43 8.2E-48 325.7 21.6 260 117-403 1-268 (268)
212 KOG1187 Serine/threonine prote 100.0 3.8E-43 8.3E-48 336.3 21.8 266 114-398 73-347 (361)
213 cd06636 STKc_MAP4K4_6 Catalyti 100.0 6.8E-43 1.5E-47 326.7 23.1 256 116-402 16-282 (282)
214 KOG0668 Casein kinase II, alph 100.0 2.8E-44 6.1E-49 306.6 12.2 281 115-405 37-328 (338)
215 cd06616 PKc_MKK4 Catalytic dom 100.0 4.3E-43 9.4E-48 329.1 21.4 262 116-405 4-273 (288)
216 cd05572 STKc_cGK_PKG Catalytic 100.0 9.3E-43 2E-47 322.2 23.2 250 124-405 1-258 (262)
217 cd06605 PKc_MAPKK Catalytic do 100.0 2.7E-43 5.9E-48 326.1 19.7 255 116-405 1-263 (265)
218 KOG0586 Serine/threonine prote 100.0 8.2E-44 1.8E-48 342.3 16.6 258 114-404 54-311 (596)
219 cd06629 STKc_MAPKKK_Bck1_like 100.0 9.5E-43 2.1E-47 323.9 23.3 261 117-402 2-272 (272)
220 cd06626 STKc_MEKK4 Catalytic d 100.0 2E-42 4.4E-47 319.9 25.4 259 117-402 1-264 (264)
221 cd06612 STKc_MST1_2 Catalytic 100.0 5.9E-43 1.3E-47 322.0 21.7 253 116-402 3-256 (256)
222 cd05578 STKc_Yank1 Catalytic d 100.0 3.5E-43 7.6E-48 324.3 19.7 253 117-402 1-258 (258)
223 cd06638 STKc_myosinIIIA Cataly 100.0 1.3E-42 2.8E-47 325.4 23.8 262 111-402 13-286 (286)
224 cd06658 STKc_PAK5 Catalytic do 100.0 4.5E-43 9.7E-48 330.0 20.0 256 116-404 22-277 (292)
225 cd06632 STKc_MEKK1_plant Catal 100.0 2.1E-42 4.6E-47 318.5 23.5 255 117-402 1-258 (258)
226 cd05096 PTKc_DDR1 Catalytic do 100.0 2.1E-42 4.6E-47 327.2 23.8 257 116-397 5-299 (304)
227 cd06623 PKc_MAPKK_plant_like C 100.0 2.7E-42 5.8E-47 318.9 23.7 257 116-405 1-262 (264)
228 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1E-42 2.3E-47 326.0 21.2 258 116-404 5-271 (284)
229 cd05577 STKc_GRK Catalytic dom 100.0 1.2E-42 2.5E-47 324.5 21.4 252 124-405 1-260 (277)
230 cd05633 STKc_GRK3 Catalytic do 100.0 1.3E-42 2.9E-47 324.6 21.7 250 123-405 1-261 (279)
231 cd05048 PTKc_Ror Catalytic Dom 100.0 1.4E-42 3E-47 324.7 21.4 252 116-399 5-279 (283)
232 cd05606 STKc_beta_ARK Catalyti 100.0 2.7E-42 5.9E-47 322.4 23.1 252 123-405 1-261 (278)
233 cd06642 STKc_STK25-YSK1 Cataly 100.0 6.8E-43 1.5E-47 326.0 18.8 256 116-405 4-259 (277)
234 cd06917 STKc_NAK1_like Catalyt 100.0 2.3E-42 5.1E-47 322.2 22.3 256 117-404 2-260 (277)
235 cd05106 PTKc_CSF-1R Catalytic 100.0 1.4E-42 3E-47 337.6 21.6 252 116-398 38-367 (374)
236 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 5E-42 1.1E-46 322.0 24.5 262 116-404 1-271 (287)
237 cd08225 STKc_Nek5 Catalytic do 100.0 2.2E-42 4.7E-47 318.4 21.7 254 117-402 1-257 (257)
238 cd05052 PTKc_Abl Catalytic dom 100.0 2.9E-42 6.3E-47 319.3 22.4 250 116-399 6-258 (263)
239 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.9E-42 8.6E-47 317.0 23.2 248 116-398 4-253 (256)
240 KOG0193 Serine/threonine prote 100.0 1.3E-43 2.9E-48 339.4 13.5 253 116-398 392-648 (678)
241 cd06640 STKc_MST4 Catalytic do 100.0 4.3E-42 9.4E-47 320.6 23.2 255 116-404 4-258 (277)
242 cd05581 STKc_PDK1 Catalytic do 100.0 1.8E-42 3.8E-47 322.9 20.6 255 116-402 1-280 (280)
243 cd06633 STKc_TAO3 Catalytic do 100.0 1.2E-41 2.5E-46 323.6 26.3 255 116-404 21-278 (313)
244 cd06659 STKc_PAK6 Catalytic do 100.0 1.9E-42 4.1E-47 326.5 20.6 256 116-404 21-276 (297)
245 KOG1035 eIF-2alpha kinase GCN2 100.0 2.4E-43 5.2E-48 359.7 15.4 262 113-403 476-875 (1351)
246 cd06627 STKc_Cdc7_like Catalyt 100.0 1.2E-41 2.5E-46 312.7 25.0 254 117-402 1-254 (254)
247 cd06635 STKc_TAO1 Catalytic do 100.0 1.3E-41 2.8E-46 323.8 26.2 255 116-404 25-282 (317)
248 cd05104 PTKc_Kit Catalytic dom 100.0 2.3E-42 4.9E-47 336.4 21.3 253 116-399 35-370 (375)
249 cd05611 STKc_Rim15_like Cataly 100.0 4.9E-42 1.1E-46 317.0 22.5 250 122-404 2-256 (260)
250 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.1E-41 2.3E-46 315.7 24.7 258 116-402 2-264 (264)
251 KOG0584 Serine/threonine prote 100.0 1.8E-43 3.9E-48 340.4 13.1 253 119-404 43-301 (632)
252 cd08219 STKc_Nek3 Catalytic do 100.0 7.7E-42 1.7E-46 314.8 23.4 251 117-400 1-253 (255)
253 cd06648 STKc_PAK_II Catalytic 100.0 9.3E-42 2E-46 319.9 24.2 255 117-404 20-274 (285)
254 cd08215 STKc_Nek Catalytic dom 100.0 8.4E-42 1.8E-46 314.0 23.4 254 117-402 1-258 (258)
255 cd08226 PK_STRAD_beta Pseudoki 100.0 2.4E-42 5.3E-47 330.4 20.5 279 122-405 4-314 (328)
256 cd06624 STKc_ASK Catalytic dom 100.0 1.3E-41 2.9E-46 315.7 24.8 256 116-402 8-268 (268)
257 cd06641 STKc_MST3 Catalytic do 100.0 9.5E-42 2.1E-46 318.4 23.9 256 116-405 4-259 (277)
258 cd05035 PTKc_Axl_like Catalyti 100.0 1.1E-41 2.5E-46 316.4 24.2 253 118-399 1-268 (273)
259 cd05072 PTKc_Lyn Catalytic dom 100.0 6.2E-42 1.3E-46 316.5 22.2 248 116-398 6-256 (261)
260 cd05075 PTKc_Axl Catalytic dom 100.0 1E-41 2.2E-46 317.0 23.2 253 118-399 1-267 (272)
261 cd05054 PTKc_VEGFR Catalytic d 100.0 4.5E-42 9.7E-47 329.6 21.3 254 116-399 7-329 (337)
262 cd05033 PTKc_EphR Catalytic do 100.0 1.8E-41 3.9E-46 314.5 24.3 252 116-399 4-261 (266)
263 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.1E-41 2.4E-46 314.3 22.4 249 116-399 4-254 (256)
264 cd05108 PTKc_EGFR Catalytic do 100.0 9.6E-42 2.1E-46 324.5 22.7 251 116-399 7-264 (316)
265 cd05084 PTKc_Fes Catalytic dom 100.0 1.6E-41 3.4E-46 312.1 23.2 245 122-398 1-248 (252)
266 cd05579 STKc_MAST_like Catalyt 100.0 5.5E-42 1.2E-46 316.7 20.2 252 124-405 1-263 (265)
267 cd06634 STKc_TAO2 Catalytic do 100.0 1.5E-41 3.3E-46 322.0 23.3 255 116-404 15-272 (308)
268 cd08228 STKc_Nek6 Catalytic do 100.0 1.8E-41 3.8E-46 314.4 23.3 253 116-399 2-261 (267)
269 cd05049 PTKc_Trk Catalytic dom 100.0 8.5E-42 1.8E-46 318.8 21.3 251 116-398 5-276 (280)
270 cd06647 STKc_PAK_I Catalytic d 100.0 7.6E-42 1.6E-46 321.8 21.0 257 115-404 18-274 (293)
271 cd05068 PTKc_Frk_like Catalyti 100.0 2.6E-41 5.7E-46 312.5 24.1 248 116-398 6-256 (261)
272 cd06606 STKc_MAPKKK Catalytic 100.0 3.6E-41 7.9E-46 309.7 24.7 259 117-402 1-260 (260)
273 cd05059 PTKc_Tec_like Catalyti 100.0 1.4E-41 3E-46 313.4 22.0 249 116-399 4-254 (256)
274 cd06618 PKc_MKK7 Catalytic dom 100.0 1.4E-41 3.1E-46 320.3 22.4 260 115-405 14-279 (296)
275 cd05093 PTKc_TrkB Catalytic do 100.0 1.6E-41 3.5E-46 318.7 22.4 250 116-398 5-274 (288)
276 KOG0614 cGMP-dependent protein 100.0 1.2E-43 2.6E-48 332.6 7.7 261 113-405 417-683 (732)
277 KOG2345 Serine/threonine prote 100.0 1.3E-42 2.9E-47 299.6 13.5 258 115-399 20-296 (302)
278 cd05116 PTKc_Syk Catalytic dom 100.0 1.7E-41 3.6E-46 313.1 21.8 244 123-398 2-250 (257)
279 PHA03390 pk1 serine/threonine- 100.0 1.7E-41 3.6E-46 315.2 21.8 247 116-403 14-266 (267)
280 cd05062 PTKc_IGF-1R Catalytic 100.0 1.8E-41 3.8E-46 316.5 22.0 253 115-399 5-274 (277)
281 cd08216 PK_STRAD Pseudokinase 100.0 1.5E-41 3.2E-46 322.8 21.8 273 128-405 12-301 (314)
282 cd08530 STKc_CNK2-like Catalyt 100.0 2.1E-41 4.7E-46 311.5 22.2 252 117-402 1-256 (256)
283 cd05090 PTKc_Ror1 Catalytic do 100.0 2.5E-41 5.4E-46 316.4 22.9 252 116-399 5-279 (283)
284 cd05122 PKc_STE Catalytic doma 100.0 6.4E-41 1.4E-45 306.8 24.9 252 117-401 1-253 (253)
285 cd05613 STKc_MSK1_N N-terminal 100.0 2.1E-41 4.6E-46 318.0 22.2 262 117-405 1-274 (290)
286 cd05061 PTKc_InsR Catalytic do 100.0 3E-41 6.6E-46 316.8 23.2 259 115-405 5-286 (288)
287 cd05091 PTKc_Ror2 Catalytic do 100.0 1.4E-41 3.1E-46 317.9 21.0 252 116-399 5-279 (283)
288 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.9E-41 6.2E-46 312.0 22.7 246 116-397 6-254 (260)
289 cd06657 STKc_PAK4 Catalytic do 100.0 2.6E-41 5.6E-46 318.0 22.3 255 118-405 22-276 (292)
290 KOG1989 ARK protein kinase fam 100.0 2.2E-42 4.7E-47 345.5 15.6 253 115-400 36-308 (738)
291 PRK13184 pknD serine/threonine 100.0 2.1E-41 4.5E-46 350.5 23.2 255 116-399 2-285 (932)
292 cd06614 STKc_PAK Catalytic dom 100.0 4.2E-41 9.1E-46 315.4 23.1 256 116-404 19-275 (286)
293 KOG0670 U4/U6-associated splic 100.0 1E-42 2.2E-47 327.1 12.0 291 98-404 421-751 (752)
294 cd05071 PTKc_Src Catalytic dom 100.0 4E-41 8.6E-46 311.6 22.3 247 116-398 6-255 (262)
295 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.3E-41 5E-46 312.6 20.7 249 115-398 5-256 (261)
296 cd05109 PTKc_HER2 Catalytic do 100.0 6E-41 1.3E-45 313.2 23.6 250 116-398 7-263 (279)
297 cd05036 PTKc_ALK_LTK Catalytic 100.0 3.6E-41 7.7E-46 314.5 22.0 252 116-399 6-274 (277)
298 cd05067 PTKc_Lck_Blk Catalytic 100.0 4.8E-41 1E-45 310.5 22.3 247 116-398 6-255 (260)
299 KOG4279 Serine/threonine prote 100.0 9.5E-43 2.1E-47 336.6 10.7 252 122-404 581-837 (1226)
300 cd05053 PTKc_FGFR Catalytic do 100.0 5.1E-41 1.1E-45 315.8 22.2 252 116-399 12-287 (293)
301 cd05088 PTKc_Tie2 Catalytic do 100.0 3.7E-41 8.1E-46 318.6 21.4 250 116-399 7-276 (303)
302 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 8.9E-41 1.9E-45 312.7 23.7 266 116-398 3-276 (283)
303 cd05089 PTKc_Tie1 Catalytic do 100.0 5.2E-41 1.1E-45 316.7 22.2 250 116-399 2-271 (297)
304 cd05610 STKc_MASTL Catalytic d 100.0 5.9E-41 1.3E-45 347.7 24.5 149 115-265 3-152 (669)
305 cd00192 PTKc Catalytic domain 100.0 9.6E-41 2.1E-45 307.6 23.3 246 122-399 1-260 (262)
306 KOG0603 Ribosomal protein S6 k 100.0 7.1E-42 1.5E-46 330.6 16.0 246 114-403 320-567 (612)
307 cd08229 STKc_Nek7 Catalytic do 100.0 5.1E-41 1.1E-45 311.3 21.2 252 116-398 2-260 (267)
308 KOG4645 MAPKKK (MAP kinase kin 100.0 1.4E-43 3E-48 363.0 4.2 259 116-403 1235-1498(1509)
309 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2E-40 4.3E-45 307.1 24.9 252 116-398 2-260 (267)
310 KOG4721 Serine/threonine prote 100.0 1.1E-42 2.4E-47 330.0 9.8 241 116-399 124-364 (904)
311 cd05060 PTKc_Syk_like Catalyti 100.0 1.2E-40 2.7E-45 307.2 23.2 244 122-398 1-250 (257)
312 cd05032 PTKc_InsR_like Catalyt 100.0 1.3E-40 2.8E-45 310.3 23.5 252 116-399 6-274 (277)
313 cd05069 PTKc_Yes Catalytic dom 100.0 1.4E-40 2.9E-45 307.6 23.4 247 116-398 6-255 (260)
314 cd05051 PTKc_DDR Catalytic dom 100.0 8.2E-41 1.8E-45 314.8 22.3 258 116-398 5-292 (296)
315 cd05066 PTKc_EphR_A Catalytic 100.0 1E-40 2.3E-45 309.6 22.5 251 116-398 4-261 (267)
316 cd05111 PTK_HER3 Pseudokinase 100.0 1.5E-40 3.3E-45 310.7 23.6 250 116-398 7-263 (279)
317 cd05034 PTKc_Src_like Catalyti 100.0 1.5E-40 3.3E-45 307.1 23.1 249 115-398 5-256 (261)
318 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.8E-40 3.9E-45 308.0 23.5 251 116-398 5-262 (268)
319 cd05105 PTKc_PDGFR_alpha Catal 100.0 8.9E-41 1.9E-45 326.8 22.5 252 116-398 37-392 (400)
320 KOG0695 Serine/threonine prote 100.0 9.8E-42 2.1E-46 305.6 14.2 258 114-404 248-521 (593)
321 cd05094 PTKc_TrkC Catalytic do 100.0 1.2E-40 2.5E-45 313.3 22.0 250 116-398 5-277 (291)
322 cd05583 STKc_MSK_N N-terminal 100.0 1.4E-40 3E-45 312.2 22.2 262 117-405 1-272 (288)
323 cd05092 PTKc_TrkA Catalytic do 100.0 1.3E-40 2.7E-45 311.3 21.7 250 116-398 5-276 (280)
324 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.1E-40 4.5E-45 310.3 23.2 268 116-399 4-279 (284)
325 PF07714 Pkinase_Tyr: Protein 100.0 3.1E-41 6.6E-46 312.0 17.3 248 119-398 2-257 (259)
326 cd05055 PTKc_PDGFR Catalytic d 100.0 1.6E-40 3.6E-45 314.1 22.6 252 116-398 35-296 (302)
327 cd05085 PTKc_Fer Catalytic dom 100.0 3.2E-40 6.8E-45 303.0 23.8 244 122-398 1-246 (250)
328 KOG0194 Protein tyrosine kinas 100.0 2.5E-41 5.4E-46 326.3 16.8 252 115-398 156-415 (474)
329 cd05123 STKc_AGC Catalytic dom 100.0 1.9E-40 4.1E-45 304.2 22.0 246 124-402 1-250 (250)
330 cd05065 PTKc_EphR_B Catalytic 100.0 2.5E-40 5.4E-45 307.3 22.8 252 116-399 4-264 (269)
331 cd05056 PTKc_FAK Catalytic dom 100.0 3.4E-40 7.5E-45 306.5 23.7 251 116-399 6-261 (270)
332 cd05115 PTKc_Zap-70 Catalytic 100.0 3.6E-40 7.9E-45 304.4 23.5 243 123-398 2-250 (257)
333 KOG0608 Warts/lats-like serine 100.0 7.4E-42 1.6E-46 327.6 12.4 259 116-404 629-933 (1034)
334 cd05112 PTKc_Itk Catalytic dom 100.0 3.6E-40 7.8E-45 303.7 23.3 249 116-399 4-254 (256)
335 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.5E-40 3.3E-45 319.9 21.6 254 116-399 7-335 (343)
336 cd05097 PTKc_DDR_like Catalyti 100.0 2E-40 4.3E-45 312.3 21.9 258 116-398 5-291 (295)
337 cd05039 PTKc_Csk_like Catalyti 100.0 3.6E-40 7.9E-45 303.8 23.1 243 116-398 6-251 (256)
338 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.2E-40 4.7E-45 313.9 22.1 252 116-399 18-295 (307)
339 cd05045 PTKc_RET Catalytic dom 100.0 2.6E-40 5.7E-45 310.7 22.4 250 117-398 1-281 (290)
340 KOG0664 Nemo-like MAPK-related 100.0 8E-43 1.7E-47 304.8 4.8 288 116-404 53-348 (449)
341 cd05073 PTKc_Hck Catalytic dom 100.0 4.3E-40 9.3E-45 304.2 23.3 247 116-398 6-255 (260)
342 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3E-40 6.5E-45 309.4 22.3 269 116-399 4-279 (284)
343 smart00219 TyrKc Tyrosine kina 100.0 4.1E-40 8.8E-45 303.1 22.5 249 118-398 1-256 (258)
344 cd05101 PTKc_FGFR2 Catalytic d 100.0 3.1E-40 6.7E-45 312.4 22.1 253 115-399 14-292 (304)
345 cd05082 PTKc_Csk Catalytic dom 100.0 3.7E-40 8.1E-45 303.8 22.0 243 116-398 6-251 (256)
346 cd05041 PTKc_Fes_like Catalyti 100.0 6E-40 1.3E-44 301.4 23.2 244 122-398 1-247 (251)
347 cd05099 PTKc_FGFR4 Catalytic d 100.0 5E-40 1.1E-44 312.4 23.4 251 116-398 12-288 (314)
348 cd05040 PTKc_Ack_like Catalyti 100.0 5.2E-40 1.1E-44 302.9 22.4 245 122-398 1-253 (257)
349 cd05046 PTK_CCK4 Pseudokinase 100.0 4.2E-40 9.2E-45 306.6 22.0 253 116-399 5-272 (275)
350 cd05043 PTK_Ryk Pseudokinase d 100.0 4.5E-40 9.7E-45 307.4 22.2 253 115-398 5-271 (280)
351 KOG1026 Nerve growth factor re 100.0 2.7E-41 5.8E-46 336.3 14.2 249 116-396 486-755 (774)
352 cd05050 PTKc_Musk Catalytic do 100.0 4E-40 8.8E-45 309.0 21.4 251 116-398 5-284 (288)
353 cd05057 PTKc_EGFR_like Catalyt 100.0 1.1E-39 2.3E-44 304.8 23.8 250 116-398 7-263 (279)
354 cd08222 STKc_Nek11 Catalytic d 100.0 3.7E-40 8E-45 304.5 20.2 253 117-402 1-260 (260)
355 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 7.6E-40 1.6E-44 305.2 21.5 238 123-399 2-272 (274)
356 KOG0665 Jun-N-terminal kinase 100.0 3.8E-41 8.1E-46 300.5 11.9 283 116-405 17-316 (369)
357 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 7.4E-40 1.6E-44 303.2 20.9 239 122-399 1-260 (262)
358 cd05058 PTKc_Met_Ron Catalytic 100.0 1.7E-39 3.6E-44 300.4 23.0 247 122-399 1-255 (262)
359 cd05047 PTKc_Tie Catalytic dom 100.0 1E-39 2.2E-44 303.6 21.6 243 122-398 1-263 (270)
360 KOG1095 Protein tyrosine kinas 100.0 5E-40 1.1E-44 338.2 21.2 251 116-398 692-956 (1025)
361 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.1E-39 2.4E-44 312.8 22.3 252 116-399 12-289 (334)
362 cd05107 PTKc_PDGFR_beta Cataly 100.0 9.9E-40 2.1E-44 319.3 22.2 253 116-399 37-395 (401)
363 cd05095 PTKc_DDR2 Catalytic do 100.0 1.4E-39 2.9E-44 306.8 22.1 258 116-398 5-292 (296)
364 cd05110 PTKc_HER4 Catalytic do 100.0 1.9E-39 4.1E-44 306.9 22.3 251 116-399 7-264 (303)
365 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 5.7E-40 1.2E-44 303.1 18.3 239 122-399 1-256 (258)
366 KOG1290 Serine/threonine prote 100.0 2.6E-39 5.7E-44 302.6 22.3 281 116-405 78-556 (590)
367 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.2E-39 4.8E-44 301.3 21.5 253 118-399 1-268 (273)
368 PLN03225 Serine/threonine-prot 100.0 1.7E-39 3.8E-44 329.1 22.4 276 114-404 130-455 (566)
369 PHA02882 putative serine/threo 100.0 5.2E-39 1.1E-43 302.7 24.0 258 116-398 12-291 (294)
370 cd05042 PTKc_Aatyk Catalytic d 100.0 2.5E-39 5.3E-44 300.6 21.2 251 122-399 1-266 (269)
371 cd08528 STKc_Nek10 Catalytic d 100.0 4.5E-39 9.8E-44 298.7 22.9 251 117-399 1-266 (269)
372 KOG1006 Mitogen-activated prot 100.0 7.2E-42 1.6E-46 297.7 3.4 262 116-405 64-333 (361)
373 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 6.6E-39 1.4E-43 297.8 23.2 250 122-398 1-265 (269)
374 cd05083 PTKc_Chk Catalytic dom 100.0 3.5E-39 7.5E-44 297.0 20.9 241 116-398 6-249 (254)
375 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4.2E-39 9E-44 301.0 21.3 257 116-398 4-278 (284)
376 KOG1151 Tousled-like protein k 100.0 8E-41 1.7E-45 309.2 9.4 269 113-405 460-747 (775)
377 cd05044 PTKc_c-ros Catalytic d 100.0 3E-39 6.5E-44 299.8 20.1 245 122-398 1-265 (269)
378 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 4.2E-39 9.2E-44 296.8 20.1 236 122-398 1-256 (259)
379 cd05576 STKc_RPK118_like Catal 100.0 1.2E-39 2.7E-44 297.3 15.5 229 127-402 4-237 (237)
380 KOG4257 Focal adhesion tyrosin 100.0 7.1E-40 1.5E-44 313.7 14.4 248 118-398 391-644 (974)
381 KOG0196 Tyrosine kinase, EPH ( 100.0 2.6E-40 5.6E-45 324.0 11.1 251 116-398 629-886 (996)
382 cd05086 PTKc_Aatyk2 Catalytic 100.0 4.5E-38 9.8E-43 292.2 23.4 250 122-398 1-264 (268)
383 KOG0199 ACK and related non-re 100.0 1.3E-39 2.8E-44 315.4 13.3 252 116-400 110-369 (1039)
384 KOG0587 Traf2- and Nck-interac 100.0 6.4E-39 1.4E-43 318.3 17.5 263 113-405 16-288 (953)
385 KOG4278 Protein tyrosine kinas 100.0 6.8E-39 1.5E-43 306.7 15.7 254 108-396 260-516 (1157)
386 KOG4250 TANK binding protein k 100.0 3.4E-39 7.5E-44 314.5 10.0 202 118-322 15-227 (732)
387 KOG1094 Discoidin domain recep 100.0 3.2E-38 7E-43 300.5 13.6 261 116-404 538-803 (807)
388 PLN03224 probable serine/threo 100.0 1.1E-36 2.4E-41 301.8 22.0 274 115-404 144-505 (507)
389 smart00220 S_TKc Serine/Threon 100.0 2E-36 4.4E-41 274.9 20.5 242 128-402 1-244 (244)
390 KOG0984 Mitogen-activated prot 100.0 1.7E-36 3.7E-41 255.3 15.3 217 112-333 42-267 (282)
391 KOG1027 Serine/threonine prote 100.0 5.5E-37 1.2E-41 303.2 10.1 250 116-403 509-771 (903)
392 PLN00113 leucine-rich repeat r 100.0 9.1E-35 2E-39 315.6 21.0 253 116-399 690-947 (968)
393 KOG0576 Mitogen-activated prot 100.0 9.7E-37 2.1E-41 294.5 4.9 260 116-404 15-276 (829)
394 KOG1167 Serine/threonine prote 100.0 1.6E-35 3.6E-40 273.6 12.0 281 115-404 35-386 (418)
395 KOG0200 Fibroblast/platelet-de 100.0 3.1E-34 6.7E-39 293.5 20.6 251 116-398 296-574 (609)
396 KOG3653 Transforming growth fa 100.0 6.7E-35 1.5E-39 272.4 12.7 266 115-394 209-494 (534)
397 KOG1025 Epidermal growth facto 100.0 3E-34 6.6E-39 282.5 13.9 249 117-398 697-952 (1177)
398 KOG1152 Signal transduction se 100.0 9.1E-34 2E-38 270.0 10.0 204 113-321 558-771 (772)
399 KOG2052 Activin A type IB rece 100.0 3.3E-32 7.1E-37 252.8 16.3 191 116-314 211-421 (513)
400 cd00180 PKc Catalytic domain o 100.0 6.5E-31 1.4E-35 232.9 21.6 213 124-400 1-215 (215)
401 PLN00181 protein SPA1-RELATED; 100.0 1.9E-32 4.2E-37 290.4 9.4 199 175-404 33-270 (793)
402 smart00221 STYKc Protein kinas 100.0 2.4E-30 5.3E-35 232.7 20.5 212 118-332 1-215 (225)
403 KOG1345 Serine/threonine kinas 100.0 9.7E-31 2.1E-35 228.9 7.7 257 115-402 23-290 (378)
404 KOG1024 Receptor-like protein 100.0 2.4E-29 5.2E-34 230.1 12.4 253 115-398 283-550 (563)
405 smart00750 KIND kinase non-cat 100.0 3.7E-29 8E-34 217.3 13.1 166 201-403 1-169 (176)
406 KOG0590 Checkpoint kinase and 100.0 2.4E-29 5.3E-34 254.6 6.6 263 119-405 321-591 (601)
407 PRK09188 serine/threonine prot 99.9 4.1E-27 8.9E-32 224.3 16.8 165 114-291 16-193 (365)
408 KOG0603 Ribosomal protein S6 k 99.9 4.2E-29 9.2E-34 242.2 3.0 240 123-405 1-249 (612)
409 COG0515 SPS1 Serine/threonine 99.9 3.2E-25 7E-30 209.2 24.1 261 118-403 2-279 (384)
410 KOG1164 Casein kinase (serine/ 99.9 1.2E-25 2.6E-30 214.1 20.9 211 117-331 19-249 (322)
411 KOG0606 Microtubule-associated 99.9 1.9E-26 4E-31 234.1 9.9 222 116-405 83-321 (1205)
412 KOG1163 Casein kinase (serine/ 99.9 1.7E-25 3.7E-30 193.1 13.8 210 115-331 14-233 (341)
413 KOG1165 Casein kinase (serine/ 99.9 1E-24 2.2E-29 196.3 16.1 214 116-336 28-256 (449)
414 cd05147 RIO1_euk RIO kinase fa 99.9 2.2E-24 4.7E-29 189.3 10.8 141 121-267 2-167 (190)
415 PF14531 Kinase-like: Kinase-l 99.9 3.4E-24 7.4E-29 196.1 8.4 238 116-390 12-288 (288)
416 PRK10359 lipopolysaccharide co 99.9 1.6E-23 3.5E-28 186.2 11.1 173 116-313 31-216 (232)
417 cd05145 RIO1_like RIO kinase f 99.9 3.9E-23 8.3E-28 181.8 13.3 142 121-268 2-168 (190)
418 PRK12274 serine/threonine prot 99.9 8.6E-23 1.9E-27 177.9 13.6 190 119-323 5-211 (218)
419 KOG4158 BRPK/PTEN-induced prot 99.9 3.9E-23 8.6E-28 190.1 11.6 192 173-393 274-504 (598)
420 KOG1240 Protein kinase contain 99.9 1.3E-23 2.8E-28 213.9 7.3 248 117-399 24-291 (1431)
421 KOG0195 Integrin-linked kinase 99.9 1.7E-23 3.6E-28 183.8 6.4 255 104-397 178-440 (448)
422 KOG1033 eIF-2alpha kinase PEK/ 99.9 2.6E-23 5.6E-28 198.5 3.8 178 192-403 331-516 (516)
423 smart00090 RIO RIO-like kinase 99.8 1.2E-20 2.7E-25 171.1 12.4 146 116-268 28-199 (237)
424 PRK10345 hypothetical protein; 99.8 3.1E-20 6.7E-25 164.6 14.2 137 119-264 5-156 (210)
425 KOG1166 Mitotic checkpoint ser 99.8 5.9E-20 1.3E-24 190.4 11.8 195 114-317 696-901 (974)
426 cd05144 RIO2_C RIO kinase fami 99.8 1.1E-18 2.3E-23 154.7 12.4 140 117-269 16-177 (198)
427 KOG0590 Checkpoint kinase and 99.8 7.5E-21 1.6E-25 193.0 -1.8 263 116-404 20-291 (601)
428 PRK14879 serine/threonine prot 99.8 1.8E-18 3.9E-23 154.7 13.1 136 122-266 2-143 (211)
429 KOG1023 Natriuretic peptide re 99.8 1.2E-18 2.6E-23 169.6 10.2 205 169-397 1-218 (484)
430 TIGR03724 arch_bud32 Kae1-asso 99.8 5.6E-18 1.2E-22 150.1 11.9 133 123-267 1-139 (199)
431 cd05119 RIO RIO kinase family, 99.7 9.1E-18 2E-22 147.2 11.7 138 121-268 2-165 (187)
432 PRK09605 bifunctional UGMP fam 99.7 2.2E-17 4.8E-22 167.8 14.3 139 116-267 333-477 (535)
433 KOG0601 Cyclin-dependent kinas 99.7 3.6E-18 7.8E-23 166.3 5.3 255 116-404 114-384 (524)
434 PRK01723 3-deoxy-D-manno-octul 99.7 3E-16 6.4E-21 142.7 13.9 137 122-266 37-191 (239)
435 cd05120 APH_ChoK_like Aminogly 99.7 1E-15 2.3E-20 128.4 11.4 132 120-266 2-138 (155)
436 KOG0606 Microtubule-associated 99.6 2.5E-17 5.4E-22 168.4 0.7 261 115-404 803-1097(1205)
437 cd05146 RIO3_euk RIO kinase fa 99.5 2.8E-13 6E-18 118.2 12.1 140 122-268 3-175 (197)
438 KOG0601 Cyclin-dependent kinas 99.5 1.1E-14 2.3E-19 142.2 3.5 258 109-404 258-519 (524)
439 KOG1266 Protein kinase [Signal 99.5 5.5E-14 1.2E-18 127.4 6.4 205 166-404 118-336 (458)
440 KOG1243 Protein kinase [Genera 99.5 1.4E-12 3.1E-17 128.7 15.8 169 134-315 30-199 (690)
441 TIGR01982 UbiB 2-polyprenylphe 99.5 3E-13 6.6E-18 133.4 11.2 142 122-268 123-308 (437)
442 PRK04750 ubiB putative ubiquin 99.4 1.1E-13 2.4E-18 138.3 6.1 145 116-269 120-316 (537)
443 cd05151 ChoK Choline Kinase (C 99.4 9E-13 2E-17 113.4 9.3 128 121-266 3-136 (170)
444 KOG3741 Poly(A) ribonuclease s 99.3 1.4E-10 3E-15 111.6 16.5 212 129-398 289-520 (655)
445 KOG2137 Protein kinase [Signal 99.2 5.2E-12 1.1E-16 125.3 3.7 154 225-404 107-270 (700)
446 COG3642 Mn2+-dependent serine/ 99.2 1.9E-10 4.2E-15 97.3 11.8 134 122-267 2-141 (204)
447 cd05154 ACAD10_11_like Acyl-Co 99.2 2E-10 4.2E-15 103.1 11.8 142 122-266 4-206 (223)
448 KOG3087 Serine/threonine prote 99.2 5.6E-10 1.2E-14 94.1 12.3 144 120-267 11-166 (229)
449 PF01163 RIO1: RIO1 family; I 99.1 3.9E-10 8.4E-15 98.1 10.6 127 131-267 1-156 (188)
450 COG4248 Uncharacterized protei 99.1 6.4E-09 1.4E-13 98.0 15.8 258 119-395 14-292 (637)
451 PRK15123 lipopolysaccharide co 99.0 5.6E-09 1.2E-13 96.2 14.8 135 130-266 36-194 (268)
452 COG0478 RIO-like serine/threon 98.9 1.1E-08 2.4E-13 91.8 11.5 137 118-266 93-251 (304)
453 PF06293 Kdo: Lipopolysacchari 98.9 2.2E-08 4.7E-13 89.1 12.6 106 161-267 57-171 (206)
454 COG1718 RIO1 Serine/threonine 98.8 1.2E-07 2.6E-12 84.3 12.7 139 122-268 54-217 (268)
455 PRK09902 hypothetical protein; 98.7 4.3E-07 9.4E-12 79.7 14.2 139 125-266 27-179 (216)
456 KOG0576 Mitogen-activated prot 98.7 4.2E-09 9E-14 104.0 0.3 243 117-403 243-488 (829)
457 PF06176 WaaY: Lipopolysacchar 98.6 6.7E-07 1.4E-11 78.8 13.1 139 116-265 31-182 (229)
458 KOG1035 eIF-2alpha kinase GCN2 98.6 4E-07 8.6E-12 95.9 10.8 204 160-404 227-439 (1351)
459 COG0661 AarF Predicted unusual 98.4 1.2E-06 2.6E-11 87.5 10.2 143 122-269 131-317 (517)
460 PF01636 APH: Phosphotransfera 98.3 8.1E-06 1.8E-10 73.5 12.6 139 121-265 2-196 (239)
461 TIGR02172 Fb_sc_TIGR02172 Fibr 98.3 9.8E-06 2.1E-10 73.1 11.7 134 122-266 7-182 (226)
462 PF13095 FTA2: Kinetochore Sim 98.2 4E-05 8.8E-10 66.9 13.1 129 116-264 37-206 (207)
463 COG2112 Predicted Ser/Thr prot 98.1 2.7E-05 5.9E-10 65.9 9.4 130 118-267 24-156 (201)
464 cd05150 APH Aminoglycoside 3'- 98.1 5E-05 1.1E-09 69.3 11.9 70 124-202 6-77 (244)
465 PLN02876 acyl-CoA dehydrogenas 98.1 7E-05 1.5E-09 80.4 14.7 81 121-202 43-129 (822)
466 KOG1235 Predicted unusual prot 98.0 4.5E-05 9.8E-10 76.2 10.2 142 122-270 167-358 (538)
467 KOG1826 Ras GTPase activating 97.9 1.4E-06 3E-11 93.9 -1.2 205 114-320 1227-1441(2724)
468 cd05155 APH_ChoK_like_1 Unchar 97.9 6.5E-05 1.4E-09 68.2 9.7 30 237-266 165-194 (235)
469 PF10707 YrbL-PhoP_reg: PhoP r 97.9 0.00038 8.3E-09 61.1 13.4 129 121-260 6-165 (199)
470 PF12260 PIP49_C: Protein-kina 97.9 5.6E-05 1.2E-09 66.0 8.1 98 164-267 8-112 (188)
471 KOG2270 Serine/threonine prote 97.8 0.00029 6.3E-09 66.4 11.3 142 121-268 149-315 (520)
472 KOG2268 Serine/threonine prote 97.7 6E-05 1.3E-09 69.8 4.9 139 116-267 92-252 (465)
473 cd05157 ETNK_euk Ethanolamine 97.6 0.00059 1.3E-08 61.8 11.0 73 121-202 3-77 (235)
474 TIGR02721 ycfN_thiK thiamine k 97.4 0.0006 1.3E-08 62.7 8.7 132 124-266 4-175 (256)
475 KOG1093 Predicted protein kina 97.4 0.00047 1E-08 67.6 8.1 172 161-404 28-199 (725)
476 PRK09550 mtnK methylthioribose 97.4 0.0037 8.1E-08 60.9 13.8 77 121-201 31-115 (401)
477 cd05153 HomoserineK_II Homoser 97.4 0.0011 2.3E-08 62.4 9.6 140 120-266 18-205 (296)
478 PRK05231 homoserine kinase; Pr 97.4 0.004 8.7E-08 59.2 13.5 30 237-266 188-217 (319)
479 PRK10593 hypothetical protein; 97.3 0.009 2E-07 56.2 14.5 78 119-202 17-98 (297)
480 cd05156 ChoK_euk Choline Kinas 97.1 0.0024 5.3E-08 60.2 9.3 29 237-265 180-212 (302)
481 cd05152 MPH2' Macrolide 2'-Pho 97.1 0.0054 1.2E-07 57.0 11.4 31 237-267 186-217 (276)
482 TIGR00938 thrB_alt homoserine 97.1 0.0071 1.5E-07 57.2 12.4 141 119-265 25-216 (307)
483 COG3173 Predicted aminoglycosi 97.1 0.0092 2E-07 56.2 12.6 149 118-269 27-231 (321)
484 PLN02421 phosphotransferase, a 96.8 0.0099 2.1E-07 56.9 10.7 29 238-266 184-213 (330)
485 PLN02756 S-methyl-5-thioribose 96.8 0.02 4.2E-07 55.9 12.5 76 120-201 36-119 (418)
486 TIGR01767 MTRK 5-methylthiorib 96.6 0.02 4.3E-07 54.8 10.7 75 123-201 2-84 (370)
487 PLN02236 choline kinase 96.6 0.025 5.4E-07 54.4 11.4 137 121-266 41-231 (344)
488 TIGR02904 spore_ysxE spore coa 96.3 0.054 1.2E-06 51.3 11.9 30 237-266 197-226 (309)
489 COG5072 ALK1 Serine/threonine 96.1 0.017 3.6E-07 54.8 6.7 73 188-266 297-370 (488)
490 PRK12396 5-methylribose kinase 96.0 0.04 8.7E-07 53.5 9.2 77 121-201 34-117 (409)
491 PF03881 Fructosamin_kin: Fruc 96.0 0.075 1.6E-06 49.6 10.8 76 118-202 19-97 (288)
492 PRK06148 hypothetical protein; 95.9 0.25 5.3E-06 54.5 15.7 31 236-266 203-236 (1013)
493 PTZ00384 choline kinase; Provi 95.8 0.038 8.3E-07 53.8 8.4 30 236-266 227-256 (383)
494 COG2334 Putative homoserine ki 95.7 0.074 1.6E-06 50.6 9.8 137 122-265 32-227 (331)
495 PTZ00296 choline kinase; Provi 95.7 0.098 2.1E-06 52.0 10.8 93 100-202 90-191 (442)
496 PRK11768 serine/threonine prot 94.9 1.1 2.5E-05 42.6 15.1 27 237-265 197-223 (325)
497 PF07387 Seadorna_VP7: Seadorn 94.7 0.19 4.1E-06 44.7 8.2 116 127-264 73-190 (308)
498 PHA03111 Ser/Thr kinase; Provi 94.6 0.036 7.8E-07 51.9 3.8 53 216-268 278-352 (444)
499 TIGR02906 spore_CotS spore coa 94.3 0.086 1.9E-06 49.7 6.0 29 236-265 187-215 (313)
500 PF05445 Pox_ser-thr_kin: Poxv 94.2 0.039 8.3E-07 52.0 3.0 53 216-268 274-348 (434)
No 1
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-71 Score=520.57 Aligned_cols=326 Identities=70% Similarity=1.173 Sum_probs=312.8
Q ss_pred CCCCCCCCccccccccCCCcchhhhhcccccCCCCcccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChH
Q 015455 78 RLSNLPKHLRGEQVAAGWPPWLTAVCGEALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE 157 (406)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~ 157 (406)
+..+.++....++...+||.|+..+.||.+.+|.++..+.|+.+++||+|.||.||+|++..+|+.||+|+++.+.....
T Consensus 79 ~~~~~~~~~e~~~~~a~~p~~l~~~~ge~~~~w~~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~ 158 (560)
T KOG0600|consen 79 RPSSVPKSTEAEQVAAGWPAWLSSVAGEALHGWGPRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEG 158 (560)
T ss_pred CCCCCCCcchhhhhhccCccccccccccccccccccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCc
Confidence 34455566666889999999999999999999999999999999999999999999999999999999999999887777
Q ss_pred HHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 015455 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG 237 (406)
Q Consensus 158 ~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ 237 (406)
......+|+.||++|+||||++|.+.+.++..+.+|||+|||+++|..++.....+|++.+++.++.||+.||+|+|++|
T Consensus 159 ~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~g 238 (560)
T KOG0600|consen 159 FPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRG 238 (560)
T ss_pred chHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcC
Confidence 78889999999999999999999999999878889999999999999999999999999999999999999999999999
Q ss_pred CeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCC
Q 015455 238 VLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKP 317 (406)
Q Consensus 238 ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~ 317 (406)
|+|||||.+|||||.+|.+||+|||||+++........++.+.|.||+|||+++|...|+.++|+||.||||.||++|++
T Consensus 239 vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkP 318 (560)
T KOG0600|consen 239 VLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKP 318 (560)
T ss_pred eeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCC
Confidence 99999999999999999999999999999988888888999999999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHh
Q 015455 318 IMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397 (406)
Q Consensus 318 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL 397 (406)
.|+|.++.+++.+|++++|.|.+++|...++|....+.+..++++.+.+.++.+++.+.+|+..||+.||.+|.||.++|
T Consensus 319 I~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL 398 (560)
T KOG0600|consen 319 ILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSAL 398 (560)
T ss_pred CcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccc
Q 015455 398 NSEVSY 403 (406)
Q Consensus 398 ~h~~f~ 403 (406)
+|+||.
T Consensus 399 ~seyF~ 404 (560)
T KOG0600|consen 399 QSEYFT 404 (560)
T ss_pred cCcccc
Confidence 999994
No 2
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=8.6e-61 Score=422.79 Aligned_cols=287 Identities=34% Similarity=0.597 Sum_probs=250.5
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
++.|+.+.++|+|+||+||+|+++.+|+.||||++.-+.-++...+..++|+.+|++|+|+|+|.++++|... ..+++
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrk--rklhL 78 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRK--RKLHL 78 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhc--ceeEE
Confidence 3679999999999999999999999999999999977665667777788999999999999999999999874 45999
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
|+|||+...++.+......++...++.++.|++.|+.|+|++++|||||||+||||+.+|.+||||||+|+.+.. ....
T Consensus 79 VFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-pgd~ 157 (396)
T KOG0593|consen 79 VFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA-PGDN 157 (396)
T ss_pred EeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcC-Ccch
Confidence 999999999998887777899999999999999999999999999999999999999999999999999999874 3334
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhh---c-CCCC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK---S-KLPN 350 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~---~-~~~~ 350 (406)
.+.++-|.||+|||.+.|...|+..+||||+||++.||++|.+.|+|.++.+++..|.+.+|....+-..- . -+..
T Consensus 158 YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~G 237 (396)
T KOG0593|consen 158 YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHG 237 (396)
T ss_pred hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceee
Confidence 67788999999999999978899999999999999999999999999999999999999999887653221 1 1111
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccccC
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQFL 406 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~~ 406 (406)
..+ |...-...+...++.++.-+.||+++||..||.+|++.+++|.|+||..|+
T Consensus 238 v~l--P~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~~ 291 (396)
T KOG0593|consen 238 VRL--PEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGFI 291 (396)
T ss_pred eec--CCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHHHH
Confidence 111 222223346666778888999999999999999999999999999998763
No 3
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-60 Score=445.18 Aligned_cols=287 Identities=38% Similarity=0.644 Sum_probs=253.4
Q ss_pred ccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCC-CCCeeeEeeeeeecCCceE
Q 015455 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD-HPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 114 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~l~~~~~~~~~~~~ 192 (406)
.+++|.++++||.|.||.||+|+.+.+|..||||+++.....-+... -+||+..|++|+ |||||+|.+++.+... .+
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~-nLREvksL~kln~hpniikL~Evi~d~~~-~L 85 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECM-NLREVKSLRKLNPHPNIIKLKEVIRDNDR-IL 85 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHH-HHHHHHHHHhcCCCCcchhhHHHhhccCc-eE
Confidence 35889999999999999999999999999999999976655433333 346999999998 9999999999988654 79
Q ss_pred EEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC
Q 015455 193 YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK 272 (406)
Q Consensus 193 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~ 272 (406)
|+|||||+.+|.+++..++..|++..++.|+.||+.||+|+|++|+.|||+||+|||+..+..+||+|||||+...+ .
T Consensus 86 ~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S--k 163 (538)
T KOG0661|consen 86 YFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRS--K 163 (538)
T ss_pred eeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccccc--C
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998854 3
Q ss_pred CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhh-cCCCCc
Q 015455 273 HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351 (406)
Q Consensus 273 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~ 351 (406)
.+.+.++-|.||+|||+++....|+.+.|+|++|||++|+.+-++.|+|.++.+++.+|.+.+|+|..+.|.+ ..+...
T Consensus 164 pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~ 243 (538)
T KOG0661|consen 164 PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASA 243 (538)
T ss_pred CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHH
Confidence 4578899999999999999888899999999999999999999999999999999999999999999988876 333322
Q ss_pred ccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 352 TLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
-.+..++.-...+....+..++++.++|..||++||.+||||.++|+||||+.
T Consensus 244 mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~ 296 (538)
T KOG0661|consen 244 MNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQV 296 (538)
T ss_pred hccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccc
Confidence 22222233334466667789999999999999999999999999999999984
No 4
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.5e-59 Score=406.89 Aligned_cols=283 Identities=41% Similarity=0.752 Sum_probs=252.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|..+++||+|.||+||+|++..+|+.||||+++..+..+.......+|+..|+.++|+||+.++++|.+.. .+.+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~--~l~lV 79 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKS--NLSLV 79 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCC--ceEEE
Confidence 5799999999999999999999999999999999987765554556778999999999999999999998854 49999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
+|||+.+|...+..+...++..+++.|+.++++||+|||++.|+||||||.|+|++.+|.+||+|||+|+.+.+.... .
T Consensus 80 fEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~-~ 158 (318)
T KOG0659|consen 80 FEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI-Q 158 (318)
T ss_pred EEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc-c
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999765543 3
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhc-CCCCcccC
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS-KLPNATLF 354 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~ 354 (406)
+..+.|.||+|||.+.|...|+..+|+||.|||+.||+-|.+.|+|.++.+++..|++.+|+|.++.|.+. .+|+...+
T Consensus 159 ~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~ 238 (318)
T KOG0659|consen 159 THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKI 238 (318)
T ss_pred ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHH
Confidence 33478999999999999999999999999999999999999999999999999999999999999998874 34544333
Q ss_pred C-CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 355 K-PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 355 ~-~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
. .+.+. ....++..++++.||+.+||..||.+|+||.|+|+|+||++
T Consensus 239 ~~~P~~~---~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~ 286 (318)
T KOG0659|consen 239 QQFPKPP---LNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS 286 (318)
T ss_pred hcCCCCc---cccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence 2 11111 22266788999999999999999999999999999999985
No 5
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.9e-59 Score=417.31 Aligned_cols=289 Identities=43% Similarity=0.732 Sum_probs=252.2
Q ss_pred ccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEE
Q 015455 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 114 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~ 193 (406)
..++|+.+++|++|.||.||+|+++.+++.||+|+++.+.-....--.-++|+++|.+.+|||||.+.+++....-..+|
T Consensus 74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 34789999999999999999999999999999999986542211122345799999999999999999999877677799
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
||||||++++..++..-..+|...+++.++.|++.|+.|||.+.|+||||||+|+|++..|.+||+|||||+.+++. ..
T Consensus 154 ~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp-~k 232 (419)
T KOG0663|consen 154 IVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP-LK 232 (419)
T ss_pred eeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCC-cc
Confidence 99999999999988887789999999999999999999999999999999999999999999999999999998755 34
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC-cc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN-AT 352 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~ 352 (406)
..+..+.|.||+|||++.|...|+.++|+||+|||+.||+++++.|+|..+.+++.+|++.+|+|.+..|....... ..
T Consensus 233 ~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k 312 (419)
T KOG0663|consen 233 PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVK 312 (419)
T ss_pred cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhh
Confidence 46788899999999999999999999999999999999999999999999999999999999999999998865433 32
Q ss_pred -cCCCCCchhhhhhhhcCC--CCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 353 -LFKPREPYKRCIQETFKD--FPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 353 -~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
...+..++. .+...++. +++...+|+..+|.+||.+|.||.++|.|+||.+
T Consensus 313 ~~~f~~~pyn-~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e 366 (419)
T KOG0663|consen 313 KMTFSEHPYN-NLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRE 366 (419)
T ss_pred ccccCCCCch-hhhhhccccccchhHHHHHHHHhccCccccccHHHhhccccccc
Confidence 222333332 33344443 4588999999999999999999999999999986
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-59 Score=429.88 Aligned_cols=261 Identities=30% Similarity=0.404 Sum_probs=221.9
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC-----hHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCC
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLDHPNVIKLEGLVTSRMS 189 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~ 189 (406)
.+.|.+.+.||+|+||.|-+|..+.+|+.||||++++.... ......+.+|+++|++|+|||||+++++|+.+.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d- 249 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD- 249 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC-
Confidence 46788899999999999999999999999999999876542 123345679999999999999999999999854
Q ss_pred ceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCC---CcEEEeeeccccc
Q 015455 190 CSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDD---GVLKIADFGLASF 266 (406)
Q Consensus 190 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~---~~~kl~DFgla~~ 266 (406)
+.||||||++||.+....-.++.+.++..+.+++||+.|+.|||++||+||||||+|||++.+ ..+||+|||+|+.
T Consensus 250 -s~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~ 328 (475)
T KOG0615|consen 250 -SSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKV 328 (475)
T ss_pred -ceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhc
Confidence 479999999997776666666689999999999999999999999999999999999999866 7899999999999
Q ss_pred cCCCCCCCCcCccccCcccccccccCC--ccCCCccchHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHh
Q 015455 267 FDPNHKHPMTSRVVTLWYRPPELLLGA--TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVE-QLHKIYKLCGSPSEEYW 343 (406)
Q Consensus 267 ~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~ 343 (406)
.+.. ....+.||||.|.|||++.+. ..+..++|+||+||+||-+++|.+||.+..... ..+.|.+........
T Consensus 329 ~g~~--sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~-- 404 (475)
T KOG0615|consen 329 SGEG--SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPL-- 404 (475)
T ss_pred cccc--eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccCh--
Confidence 8633 346788999999999999643 324558999999999999999999999876655 566666543333322
Q ss_pred hhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 344 KKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.+..++.++++||..||..||++|||+.|+|+||||+.
T Consensus 405 -----------------------~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~ 442 (475)
T KOG0615|consen 405 -----------------------QWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKD 442 (475)
T ss_pred -----------------------hhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhc
Confidence 23478999999999999999999999999999999983
No 7
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-58 Score=421.07 Aligned_cols=259 Identities=29% Similarity=0.446 Sum_probs=230.8
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~ 193 (406)
.++|++++.||+|+||+||.++.+.+++.||+|++++... .....+...+|..+|..++||+||+++..|++ ...+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt--~~kLy 101 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQT--EEKLY 101 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEeccc--CCeEE
Confidence 3789999999999999999999999999999999987755 34467788899999999999999999777776 55699
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
+|+||+.||.+..++++.+.|++..++.++.+|+.||.|||++|||||||||+|||+|++|+++|+|||||+..-... .
T Consensus 102 lVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~-~ 180 (357)
T KOG0598|consen 102 LVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG-D 180 (357)
T ss_pred EEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCC-C
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999654332 2
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
.+.+.+||+.|||||++.+.. |+.++||||||+++|||++|.+||.+.+.....++|.+.....+
T Consensus 181 ~t~tfcGT~eYmAPEil~~~g-y~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~-------------- 245 (357)
T KOG0598|consen 181 ATRTFCGTPEYMAPEILLGKG-YDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLP-------------- 245 (357)
T ss_pred ccccccCCccccChHHHhcCC-CCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCC--------------
Confidence 355689999999999998865 99999999999999999999999999999999999977431111
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCc----CHHHHhcCcccccc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERL----TATVALNSEVSYQF 405 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp----ta~elL~h~~f~~~ 405 (406)
...++.++++||+++|..||++|. .+.++-+||||.++
T Consensus 246 --------------p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~i 287 (357)
T KOG0598|consen 246 --------------PGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGI 287 (357)
T ss_pred --------------CccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccC
Confidence 124788999999999999999996 69999999999864
No 8
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-57 Score=437.25 Aligned_cols=255 Identities=29% Similarity=0.472 Sum_probs=230.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
.+|...+.||+|||+.||.+++..+|..||+|++.+..+ .+...+.+.+|++|.++|+|||||+++++|++ ..++||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FED--s~nVYi 95 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFED--SNNVYI 95 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeec--CCceEE
Confidence 579999999999999999999999999999999987654 45667788999999999999999999999998 456999
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
|+|+|..+.+..+..+.+.++|.+++.+++||+.||.|||+++|+|||||..|+|++++.+|||+|||||..+.... +.
T Consensus 96 vLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~-Er 174 (592)
T KOG0575|consen 96 VLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG-ER 174 (592)
T ss_pred EEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcc-cc
Confidence 99999987777777788899999999999999999999999999999999999999999999999999999986442 23
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
..+.||||.|+|||++.... ++..+||||+||+||.|++|+|||...+-.+.+.+|...-... |
T Consensus 175 k~TlCGTPNYIAPEVl~k~g-HsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~----------P----- 238 (592)
T KOG0575|consen 175 KKTLCGTPNYIAPEVLNKSG-HSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSM----------P----- 238 (592)
T ss_pred cceecCCCcccChhHhccCC-CCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccc----------c-----
Confidence 56789999999999998654 9999999999999999999999999999999999997742222 2
Q ss_pred CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccc
Q 015455 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSY 403 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~ 403 (406)
..++.++++||.+||+.||.+|||++++|.|+||+
T Consensus 239 --------------~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~ 273 (592)
T KOG0575|consen 239 --------------SHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFK 273 (592)
T ss_pred --------------cccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhh
Confidence 27899999999999999999999999999999994
No 9
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1e-57 Score=415.46 Aligned_cols=257 Identities=31% Similarity=0.483 Sum_probs=224.2
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++.+.++.||+|..|+||+++++.+++.+|+|++.. ..+....+++.+|+++++..+|||||.+||.|..... .++++
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~-~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~-~isI~ 156 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL-NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE-EISIC 156 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc-cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc-eEEee
Confidence 578889999999999999999999999999999944 4567788899999999999999999999999998654 69999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN-NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
||||+++.++.+....+.++|.....++.++++||.|||+ ++||||||||+|||++..|.|||||||.++.+... .
T Consensus 157 mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS---~ 233 (364)
T KOG0581|consen 157 MEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS---I 233 (364)
T ss_pred hhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh---h
Confidence 9999998888777766889999999999999999999996 89999999999999999999999999999987544 4
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHHHHhCCCCHHHhhhcCCC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGR-----TEVEQLHKIYKLCGSPSEEYWKKSKLP 349 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~ 349 (406)
..+++||..|||||.+.+.. |+.++||||||+.++|+++|+.||... ...+.+..|.. .++. .+|
T Consensus 234 a~tfvGT~~YMsPERi~g~~-Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~---~ppP------~lP 303 (364)
T KOG0581|consen 234 ANTFVGTSAYMSPERISGES-YSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD---EPPP------RLP 303 (364)
T ss_pred cccccccccccChhhhcCCc-CCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc---CCCC------CCC
Confidence 57889999999999999865 999999999999999999999999875 33344444433 2221 011
Q ss_pred CcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 350 NATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
. ..+|+++++||..||++||.+|||+.|+|+|||++++
T Consensus 304 ~------------------~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~ 341 (364)
T KOG0581|consen 304 E------------------GEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKF 341 (364)
T ss_pred c------------------ccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhc
Confidence 1 1388899999999999999999999999999999864
No 10
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-56 Score=405.06 Aligned_cols=289 Identities=39% Similarity=0.610 Sum_probs=246.7
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeee---cCCceE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTS---RMSCSL 192 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~---~~~~~~ 192 (406)
..|..++.||+|+||.|..+.+..+|+.||||++.......-..++..+|+.+|++++|+||+.+.+++.. .....+
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv 101 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV 101 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence 46777899999999999999999999999999997444455667788899999999999999999999865 334568
Q ss_pred EEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC-C
Q 015455 193 YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN-H 271 (406)
Q Consensus 193 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~-~ 271 (406)
|+|+|+|+.+|...+... ..+++..++.++.||+.||.|+|+.||+||||||+|+|++.+..+||+|||+|+..... .
T Consensus 102 YiV~elMetDL~~iik~~-~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~ 180 (359)
T KOG0660|consen 102 YLVFELMETDLHQIIKSQ-QDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFE 180 (359)
T ss_pred EEehhHHhhHHHHHHHcC-ccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCc
Confidence 999999988888866554 35999999999999999999999999999999999999999999999999999987543 1
Q ss_pred CCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCc
Q 015455 272 KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351 (406)
Q Consensus 272 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 351 (406)
....+.++.|.||+|||++.....|+.++||||+|||+.||++|++.|+|.+...++..|.+.+|+|+++.+........
T Consensus 181 ~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~a 260 (359)
T KOG0660|consen 181 DGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKA 260 (359)
T ss_pred ccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHH
Confidence 22357788899999999998888899999999999999999999999999999999999999999999877655432211
Q ss_pred c--cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 352 T--LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 352 ~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
. +......-+..+...+++.++.+.||+++||..||.+|+|++|+|+||||.++
T Consensus 261 r~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~ 316 (359)
T KOG0660|consen 261 RPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPY 316 (359)
T ss_pred HHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhh
Confidence 1 11111112234566678999999999999999999999999999999999865
No 11
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=7.3e-55 Score=396.33 Aligned_cols=290 Identities=41% Similarity=0.729 Sum_probs=248.9
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCC-eeeEeeeeeecC----C
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN-VIKLEGLVTSRM----S 189 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~-iv~l~~~~~~~~----~ 189 (406)
+..|+.+++||+|.||+||+|+.+.+|+.||+|+++.+.-.+..-....+|+.+|+.|+|+| ||.+++++.... .
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 36799999999999999999999999999999999876542222234567999999999999 999999997643 2
Q ss_pred ceEEEEEecccccHHHHhcCCC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccc
Q 015455 190 CSLYLVFHYMEHDLAGLAASPE---VKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASF 266 (406)
Q Consensus 190 ~~~~lv~e~~~~~l~~~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~ 266 (406)
..+++|+||++.++..++.... ..++...++.+++||+.||+|||+++|+||||||.||||+++|.+||+|||+|+.
T Consensus 90 ~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra 169 (323)
T KOG0594|consen 90 GKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARA 169 (323)
T ss_pred ceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHH
Confidence 4699999999999998876655 4688899999999999999999999999999999999999999999999999997
Q ss_pred cCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhc
Q 015455 267 FDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS 346 (406)
Q Consensus 267 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 346 (406)
+.-.. ...+..++|.+|+|||++.|...|+...||||+|||++||+++++.|+|..+.+++..|.+.+|+|.++.|...
T Consensus 170 ~~ip~-~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v 248 (323)
T KOG0594|consen 170 FSIPM-RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGV 248 (323)
T ss_pred hcCCc-ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCc
Confidence 75332 23567789999999999999888999999999999999999999999999999999999999999999988874
Q ss_pred C-CCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 347 K-LPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 347 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
. +++.....+...-...+....+..+++..+++.+||+.+|.+|.||+.+|+||||.+.
T Consensus 249 ~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 249 SSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred cccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 3 4444333332222445555666777899999999999999999999999999999864
No 12
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-55 Score=389.30 Aligned_cols=255 Identities=25% Similarity=0.411 Sum_probs=231.3
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~ 193 (406)
.++|+.++.||.|+||.|.+++.+.+|..||+|++.+... .....+...+|..+|+.+.||+++++++.|.+ ..++|
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d--~~~ly 120 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKD--NSNLY 120 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeecc--CCeEE
Confidence 4789999999999999999999999999999999987654 55667788899999999999999999887776 56799
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
|||||++|+-+..+.++.++|++..++.++.||+.||+|||+++|++|||||+|||+|.+|++||+|||+|+.....
T Consensus 121 mvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r--- 197 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR--- 197 (355)
T ss_pred EEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCc---
Confidence 99999999988888888889999999999999999999999999999999999999999999999999999987543
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
+.+.||||.|+|||++.... |+.++|||||||++|||+.|.+||...+....+++|.+..-..|
T Consensus 198 -T~TlCGTPeYLAPEii~sk~-ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP-------------- 261 (355)
T KOG0616|consen 198 -TWTLCGTPEYLAPEIIQSKG-YNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFP-------------- 261 (355)
T ss_pred -EEEecCCccccChHHhhcCC-CCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCC--------------
Confidence 46789999999999988754 99999999999999999999999999999999999988543332
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCc-----CHHHHhcCcccccc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERL-----TATVALNSEVSYQF 405 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----ta~elL~h~~f~~~ 405 (406)
..+++++++||.++|+.|-.+|. ...++..||||+.+
T Consensus 262 ---------------~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v 303 (355)
T KOG0616|consen 262 ---------------SYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGV 303 (355)
T ss_pred ---------------cccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccc
Confidence 26899999999999999999993 58899999999864
No 13
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-55 Score=401.40 Aligned_cols=281 Identities=38% Similarity=0.630 Sum_probs=240.7
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCc---eE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC---SL 192 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~---~~ 192 (406)
-.|...+.+|+|+||+||.|....++..||||++..+.. .--+|+++|+.++|||||++.-+|...... ++
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r------~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR------YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC------cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 468889999999999999999999999999999865432 122499999999999999999888654333 67
Q ss_pred EEEEecccccHHHHhcC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCC-CcEEEeeeccccccC
Q 015455 193 YLVFHYMEHDLAGLAAS---PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDD-GVLKIADFGLASFFD 268 (406)
Q Consensus 193 ~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~-~~~kl~DFgla~~~~ 268 (406)
.+|||||+.++...+.. .+..++.-.++-+..||++||+|||+.||+||||||.|+|+|.+ |.+||||||.|+.+.
T Consensus 98 nlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~ 177 (364)
T KOG0658|consen 98 NLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLV 177 (364)
T ss_pred HHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeec
Confidence 79999999999887653 46689999999999999999999999999999999999999966 899999999999997
Q ss_pred CCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCC
Q 015455 269 PNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348 (406)
Q Consensus 269 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 348 (406)
.+.. ..++.+|..|+|||.+.|...|+.+.||||.||++.||+-|++.|+|.+..+++..|.+.+|.|+.+....++-
T Consensus 178 ~~ep--niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~ 255 (364)
T KOG0658|consen 178 KGEP--NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNP 255 (364)
T ss_pred cCCC--ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCc
Confidence 6654 47788999999999999999999999999999999999999999999999999999999999999988776654
Q ss_pred CCcccCCCCCchhhhhhh-hcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 349 PNATLFKPREPYKRCIQE-TFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
.......+ .-....+.+ ..+..++++.+|+.++|.++|.+|.|+.|+|+||||+.+
T Consensus 256 ~y~~~~~p-~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdel 312 (364)
T KOG0658|consen 256 NYTEFKFP-QIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDEL 312 (364)
T ss_pred ccccccCc-ccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHh
Confidence 33222211 111222222 456889999999999999999999999999999999864
No 14
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-55 Score=416.16 Aligned_cols=260 Identities=34% Similarity=0.497 Sum_probs=227.5
Q ss_pred ccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCce
Q 015455 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCS 191 (406)
Q Consensus 114 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~~ 191 (406)
...+|.+.+.||.|+|++||+|+++.+++.||||++.+..+ .+...+-+.+|.++|.+| .||.|++|+..|.+ ...
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD--~~s 148 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQD--EES 148 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeec--ccc
Confidence 34789999999999999999999999999999999977654 333445567799999999 89999999777776 456
Q ss_pred EEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC
Q 015455 192 LYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 192 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~ 271 (406)
+|+|+||+++|.+-.++.+-+.|++..++.++.||+.||+|||++|||||||||+|||||.++++||+|||.|+.+.+..
T Consensus 149 LYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~ 228 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQ 228 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhh
Confidence 99999999986655566666799999999999999999999999999999999999999999999999999999886432
Q ss_pred CC------------CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Q 015455 272 KH------------PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPS 339 (406)
Q Consensus 272 ~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 339 (406)
.. ...+++||..|++||++.... .+..+|+|+||||||+|+.|.+||.+.++.-.+++|++.....+
T Consensus 229 ~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~-~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp 307 (604)
T KOG0592|consen 229 KSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSP-AGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFP 307 (604)
T ss_pred ccccCccCcccccCcccceeeeecccCHHHhcCCC-CCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCC
Confidence 22 124589999999999887654 89999999999999999999999999999999999998643332
Q ss_pred HHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 340 EEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
+++++.+.|||+++|..||.+|+|+.++-+||||..+
T Consensus 308 -----------------------------~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~V 344 (604)
T KOG0592|consen 308 -----------------------------EGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGV 344 (604)
T ss_pred -----------------------------CCCCHHHHHHHHHHHccCccccccHHHHhhCcccccC
Confidence 3789999999999999999999999999999999753
No 15
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=5.6e-55 Score=412.87 Aligned_cols=263 Identities=33% Similarity=0.469 Sum_probs=228.6
Q ss_pred ccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceE
Q 015455 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 114 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~ 192 (406)
..++|++++.||+|+||.||+|+.+.+|..||+|+++++.. .....+.++.|..+|...++|+||+|+..|.+ ..++
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD--~~~L 216 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQD--KEYL 216 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecC--CCee
Confidence 35899999999999999999999999999999999988764 56678889999999999999999999777776 5679
Q ss_pred EEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCC---
Q 015455 193 YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDP--- 269 (406)
Q Consensus 193 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~--- 269 (406)
||||||++||....++.+.+.|++..++.++.+++.|++.||+.|+|||||||+|+|||..|++||+|||||.-+..
T Consensus 217 YLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~ 296 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHR 296 (550)
T ss_pred EEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhh
Confidence 99999999988888888888999999999999999999999999999999999999999999999999999954321
Q ss_pred ------------C-------C-C------C-----------------CCcCccccCcccccccccCCccCCCccchHHHH
Q 015455 270 ------------N-------H-K------H-----------------PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAG 306 (406)
Q Consensus 270 ------------~-------~-~------~-----------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslG 306 (406)
. . . . ...+.+|||.|+|||++.+.. |+..+||||||
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kg-Y~~~cDwWSLG 375 (550)
T KOG0605|consen 297 IESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKG-YGKECDWWSLG 375 (550)
T ss_pred hhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCC-CCccccHHHHH
Confidence 0 0 0 0 113468999999999999876 99999999999
Q ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCC
Q 015455 307 CILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAID 386 (406)
Q Consensus 307 v~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 386 (406)
||+||||.|.+||.+.+..+...+|+..-. ..++|.. ..++++++|||.+||. |
T Consensus 376 ~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~--------~l~fP~~-----------------~~~s~eA~DLI~rll~-d 429 (550)
T KOG0605|consen 376 CIMYEMLVGYPPFCSETPQETYRKIVNWRE--------TLKFPEE-----------------VDLSDEAKDLITRLLC-D 429 (550)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhh--------hccCCCc-----------------CcccHHHHHHHHHHhc-C
Confidence 999999999999999999999999987421 1122221 2577999999999999 9
Q ss_pred CCCCcC---HHHHhcCcccccc
Q 015455 387 PAERLT---ATVALNSEVSYQF 405 (406)
Q Consensus 387 P~~Rpt---a~elL~h~~f~~~ 405 (406)
|.+|.. ++|+-+||||+.+
T Consensus 430 ~~~RLG~~G~~EIK~HPfF~~v 451 (550)
T KOG0605|consen 430 PENRLGSKGAEEIKKHPFFKGV 451 (550)
T ss_pred HHHhcCcccHHHHhcCCccccC
Confidence 999985 9999999999854
No 16
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-53 Score=391.88 Aligned_cols=262 Identities=29% Similarity=0.458 Sum_probs=227.8
Q ss_pred CCcccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCc
Q 015455 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 111 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~ 190 (406)
......+|.+.+.||+|+||+||+|+++.++..||||.+.+..+.....+.+..|+.+|+.++|||||.+++++..+ .
T Consensus 5 ~~~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~--~ 82 (429)
T KOG0595|consen 5 SMRVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDD--D 82 (429)
T ss_pred cccccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecC--C
Confidence 34455789999999999999999999999999999999998888888889999999999999999999999999884 4
Q ss_pred eEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCC------CcEEEeeeccc
Q 015455 191 SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDD------GVLKIADFGLA 264 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~------~~~kl~DFgla 264 (406)
++|+|||||+|+.+..+.+..+.+++..++.++.||+.||++||+++||||||||.||||+.. -.+||+|||+|
T Consensus 83 ~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 83 FIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred eEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 799999999988777777777799999999999999999999999999999999999999865 46899999999
Q ss_pred cccCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhh
Q 015455 265 SFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344 (406)
Q Consensus 265 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 344 (406)
+.+.+... ..+.+|+|.|||||++.... |+.|+|+||+|+++|+|++|++||...+..+.+..+.+.....+
T Consensus 163 R~L~~~~~--a~tlcGSplYMAPEV~~~~~-YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~----- 234 (429)
T KOG0595|consen 163 RFLQPGSM--AETLCGSPLYMAPEVIMSQQ-YDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVP----- 234 (429)
T ss_pred hhCCchhH--HHHhhCCccccCHHHHHhcc-ccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccC-----
Confidence 99875433 56789999999999997644 99999999999999999999999999999998886655322111
Q ss_pred hcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccc
Q 015455 345 KSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSY 403 (406)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~ 403 (406)
.....+++...+|+...|..+|..|.+..+-+.|+++.
T Consensus 235 ---------------------~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~ 272 (429)
T KOG0595|consen 235 ---------------------VLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLA 272 (429)
T ss_pred ---------------------chhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcc
Confidence 11124567777888899999999999988888888765
No 17
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.9e-55 Score=383.34 Aligned_cols=249 Identities=30% Similarity=0.502 Sum_probs=217.6
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
.+|+++++||+|+||.||++++..+|..+|.|.+..+..+.........|+.+|++|+|||||++++.-..+....+++|
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 57999999999999999999999999999999999888888888899999999999999999999884333334558999
Q ss_pred EecccccHHHHh----cCCCCCCCHHHHHHHHHHHHHHHHHHHH--CC--CeeccCCCCCeEEcCCCcEEEeeecccccc
Q 015455 196 FHYMEHDLAGLA----ASPEVKFTEPQVKCYMHQLLSGLEHCHN--NG--VLHRDIKGSNLLIDDDGVLKIADFGLASFF 267 (406)
Q Consensus 196 ~e~~~~~l~~~~----~~~~~~~~~~~~~~~~~qi~~aL~~LH~--~~--ivHrDlkp~NIll~~~~~~kl~DFgla~~~ 267 (406)
||||++|.+..+ ...+..++|..+|.++.|++.||..+|+ .+ |+||||||.||+++.+|.+||+||||++.+
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 999997655433 3456689999999999999999999999 45 999999999999999999999999999998
Q ss_pred CCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcC
Q 015455 268 DPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347 (406)
Q Consensus 268 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 347 (406)
.... ....+.+|||.||+||.+.+.+ |+++|||||+||++|||+.-++||.|.+-.+..++|.+.-.+|...
T Consensus 179 ~s~~-tfA~S~VGTPyYMSPE~i~~~~-Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~------ 250 (375)
T KOG0591|consen 179 SSKT-TFAHSLVGTPYYMSPERIHESG-YNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPD------ 250 (375)
T ss_pred cchh-HHHHhhcCCCcccCHHHHhcCC-CCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcH------
Confidence 7543 4467889999999999998865 9999999999999999999999999998888888887753322111
Q ss_pred CCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCH
Q 015455 348 LPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTA 393 (406)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta 393 (406)
..+|.++..||..|++.||..||+.
T Consensus 251 ---------------------~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 251 ---------------------EHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred ---------------------HHhhhHHHHHHHHHccCCcccCCCc
Confidence 1578899999999999999999985
No 18
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-52 Score=406.75 Aligned_cols=259 Identities=26% Similarity=0.416 Sum_probs=229.8
Q ss_pred cccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCc
Q 015455 113 RRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 113 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~ 190 (406)
...++|.++++||+|+||+|+++..+.+++.||||+++++.+ ..+..+....|..|+... +||.+++++..|.. ..
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT--~~ 442 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQT--KE 442 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccccc--CC
Confidence 346899999999999999999999999999999999998865 677788899999999888 59999999988887 45
Q ss_pred eEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 191 SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
++|+||||+.|+. ..+..+...|++..++.|+..|+.||.|||++||||||||.+|||||.+|++||+|||+++..- .
T Consensus 443 ~l~fvmey~~Ggd-m~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m-~ 520 (694)
T KOG0694|consen 443 HLFFVMEYVAGGD-LMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM-G 520 (694)
T ss_pred eEEEEEEecCCCc-EEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccC-C
Confidence 6999999999988 4455566799999999999999999999999999999999999999999999999999998643 1
Q ss_pred CCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 271 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
....+++++|||.|+|||++.+.. |+.++|||||||+||||+.|..||+|.++.+.+..|... +..+|
T Consensus 521 ~g~~TsTfCGTpey~aPEil~e~~-Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d----------~~~yP- 588 (694)
T KOG0694|consen 521 QGDRTSTFCGTPEFLAPEVLTEQS-YTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND----------EVRYP- 588 (694)
T ss_pred CCCccccccCChhhcChhhhccCc-ccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC----------CCCCC-
Confidence 223467899999999999998865 999999999999999999999999999999999999762 22222
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcC-----HHHHhcCcccccc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT-----ATVALNSEVSYQF 405 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----a~elL~h~~f~~~ 405 (406)
..++.++.++|+++|.++|++|.. +.++..||||+.+
T Consensus 589 ------------------~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i 630 (694)
T KOG0694|consen 589 ------------------RFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSI 630 (694)
T ss_pred ------------------CcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccC
Confidence 368999999999999999999985 6899999999864
No 19
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-54 Score=373.41 Aligned_cols=260 Identities=28% Similarity=0.448 Sum_probs=229.5
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
.+.|++.+.||+|.|++||++.+..+|+.+|+|++....+.....+.+.+|+.|.+.|+|||||++++.+.. ..+.|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~--~~~~yl 87 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE--ESFHYL 87 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcc--cceeEE
Confidence 478999999999999999999999999999999998877777778889999999999999999999988776 567999
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcC---CCcEEEeeeccccccCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD---DGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~---~~~~kl~DFgla~~~~~~~ 271 (406)
|+|+|.|+.+..-.-....++|..+-.+++||++||.|+|.+||||||+||+|+|+-. ..-+||+|||+|..++.
T Consensus 88 vFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~-- 165 (355)
T KOG0033|consen 88 VFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND-- 165 (355)
T ss_pred EEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCC--
Confidence 9999999766543333357899999999999999999999999999999999999953 34699999999999873
Q ss_pred CCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCc
Q 015455 272 KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351 (406)
Q Consensus 272 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 351 (406)
......++|||.|||||++...+ |+..+|||+.||+||-|+.|++||.+.+....++.|.+.....+..+|
T Consensus 166 g~~~~G~~GtP~fmaPEvvrkdp-y~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w-------- 236 (355)
T KOG0033|consen 166 GEAWHGFAGTPGYLSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEW-------- 236 (355)
T ss_pred ccccccccCCCcccCHHHhhcCC-CCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCccc--------
Confidence 33467789999999999987754 999999999999999999999999999999999999886544443333
Q ss_pred ccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 352 TLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
+++++++++||++||..||.+|+|+.|+|+|||+.+
T Consensus 237 -----------------~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 237 -----------------DTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICN 272 (355)
T ss_pred -----------------CcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence 589999999999999999999999999999999974
No 20
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.6e-51 Score=386.69 Aligned_cols=284 Identities=36% Similarity=0.669 Sum_probs=234.7
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
.++|++.+.||.|+||.||+|++..+++.||+|.++..... .....+.+|+.+++.++||||+++++++... ...++
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~l 80 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKNLKHANIVTLHDIIHTE--RCLTL 80 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC-CcchhHHHHHHHHHhCCCCCEeeEEEEEcCC--CeEEE
Confidence 36899999999999999999999999999999998754322 2234567899999999999999999998764 46899
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
||||+++++...+......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 81 v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~-~ 159 (288)
T cd07871 81 VFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK-T 159 (288)
T ss_pred EEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc-c
Confidence 999999988887766666789999999999999999999999999999999999999999999999999976543221 2
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc-
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL- 353 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~- 353 (406)
.....+++.|+|||++.+...++.++||||+||++|+|++|++||.+.+..+.+..+.+..+.++.+.|........-.
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07871 160 YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRS 239 (288)
T ss_pred ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhc
Confidence 3445789999999998776668999999999999999999999999999999999999999999888776543221100
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
...............+.+++++++||.+||++||.+|||++|+|+||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 240 YLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred cccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 0000001111223345678899999999999999999999999999998
No 21
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-52 Score=396.50 Aligned_cols=257 Identities=32% Similarity=0.503 Sum_probs=222.4
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC---hHHHHHHHHHHHHHhhCC-CCCeeeEeeeeeecCCc
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE---PESVKFMAREILILRRLD-HPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~-h~~iv~l~~~~~~~~~~ 190 (406)
...|.+.+.||+|+||+|++|++..+|..||+|++...... ....+.+.+|+.+++.++ ||||+++++++.....
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~- 94 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK- 94 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe-
Confidence 46899999999999999999999999999999987664221 134556778999999999 9999999999988544
Q ss_pred eEEEEEecccc-cHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCC-CcEEEeeeccccccC
Q 015455 191 SLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDD-GVLKIADFGLASFFD 268 (406)
Q Consensus 191 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~-~~~kl~DFgla~~~~ 268 (406)
+|+||||+.| .+++.+.. .+++.+..++.+++|++.|++|||++||+||||||+|||++.+ +++||+|||++....
T Consensus 95 -~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 95 -IYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred -EEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence 9999999997 56666666 7899999999999999999999999999999999999999999 999999999999874
Q ss_pred CCCCCCCcCccccCcccccccccCCc-cCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcC
Q 015455 269 PNHKHPMTSRVVTLWYRPPELLLGAT-DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347 (406)
Q Consensus 269 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 347 (406)
.........+||+.|+|||++.+.. .-+.++||||+||+||.|++|+.||...+....+.+|.+.....
T Consensus 173 -~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~--------- 242 (370)
T KOG0583|consen 173 -GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKI--------- 242 (370)
T ss_pred -CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccC---------
Confidence 2233457789999999999998866 34689999999999999999999999988888888876532111
Q ss_pred CCCcccCCCCCchhhhhhhhcCCC-CCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 348 LPNATLFKPREPYKRCIQETFKDF-PPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
| ..+ ++++.+||.+||..||.+|+|+.+++.||||+.
T Consensus 243 -p-------------------~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 243 -P-------------------SYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred -C-------------------CCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 1 245 899999999999999999999999999999985
No 22
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=8e-51 Score=381.35 Aligned_cols=284 Identities=35% Similarity=0.589 Sum_probs=232.1
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.+.||+|+||.||+|++..+++.||+|++..........+.+.+|+.+++.++||||+++++++.. ...+|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 78 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRR--RGKLYLV 78 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEec--CCEEEEE
Confidence 36999999999999999999999999999999998665444455677889999999999999999999876 4569999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
|||++++++..+......+++..++.++.|++.||.|||+.||+||||||+||+++.++.+||+|||++...........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (287)
T cd07848 79 FEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANY 158 (287)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccc
Confidence 99999998887766666899999999999999999999999999999999999999999999999999987654333333
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCC-CCc-cc
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL-PNA-TL 353 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~-~~ 353 (406)
....||+.|+|||++.+.. ++.++|||||||++|+|++|++||.+.+..+....+....+..+...+..... +.. ..
T Consensus 159 ~~~~~~~~y~aPE~~~~~~-~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07848 159 TEYVATRWYRSPELLLGAP-YGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGL 237 (287)
T ss_pred cccccccccCCcHHHcCCC-CCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhccc
Confidence 4567899999999987754 89999999999999999999999999988888888888777776554432110 000 00
Q ss_pred CCCC-CchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 354 FKPR-EPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 354 ~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
..+. .............+++++.+||++||++||++|||++++|+||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 238 RFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred ccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 0000 000111122234578889999999999999999999999999998
No 23
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-52 Score=387.05 Aligned_cols=264 Identities=32% Similarity=0.462 Sum_probs=225.4
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC------------hHHHHHHHHHHHHHhhCCCCCeeeEee
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE------------PESVKFMAREILILRRLDHPNVIKLEG 182 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~------------~~~~~~~~~E~~~l~~l~h~~iv~l~~ 182 (406)
.++|++++.||+|.||+|-+|++..+++.||||++.+..+. ....+...+|+.||+++.|||||+|++
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE 175 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE 175 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence 58899999999999999999999999999999999764321 122457889999999999999999999
Q ss_pred eeeecCCceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeec
Q 015455 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFG 262 (406)
Q Consensus 183 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFg 262 (406)
+..++....+|||+|||..+-....-.....+++.+++.|+++++.||+|||.+|||||||||+|+||+++|++||+|||
T Consensus 176 vLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFG 255 (576)
T KOG0585|consen 176 VLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFG 255 (576)
T ss_pred eecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccc
Confidence 99999899999999999987766544444349999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCC----CCCcCccccCcccccccccCC---ccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Q 015455 263 LASFFDPNHK----HPMTSRVVTLWYRPPELLLGA---TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLC 335 (406)
Q Consensus 263 la~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~---~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~ 335 (406)
.+..+..+.. ......+|||.|+|||.+.+. ...+.+.||||+||+||.|+.|+.||.+....+.+.+|...-
T Consensus 256 Vs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~p 335 (576)
T KOG0585|consen 256 VSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDP 335 (576)
T ss_pred eeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCc
Confidence 9987733321 123446899999999998762 335689999999999999999999999999999999997732
Q ss_pred CCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 336 GSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
-.++. .+.+.++++|||.+||.+||++|++..++..|||..+.
T Consensus 336 L~fP~---------------------------~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 336 LEFPE---------------------------NPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred ccCCC---------------------------cccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 22111 13577889999999999999999999999999998653
No 24
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.7e-51 Score=377.94 Aligned_cols=262 Identities=27% Similarity=0.358 Sum_probs=225.4
Q ss_pred ccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC-hHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceE
Q 015455 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-PESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 114 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~ 192 (406)
..++|++++.||.|.-|+||+++...++..+|+|++.+..+. .....+...|.+||..++||.++.||+.|+. ..+.
T Consensus 75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet--~~~~ 152 (459)
T KOG0610|consen 75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFET--DKYS 152 (459)
T ss_pred CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeec--ccee
Confidence 357899999999999999999999999999999999887653 4556677889999999999999999999987 5679
Q ss_pred EEEEecccccHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCC-
Q 015455 193 YLVFHYMEHDLAGLAA--SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDP- 269 (406)
Q Consensus 193 ~lv~e~~~~~l~~~~~--~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~- 269 (406)
|++||||.|+.+..+. ++++.|++..++.++.+++.||+|||-.|||+|||||+||||.++|+|.|+||.|+.....
T Consensus 153 cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 153 CLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 9999999997776554 4567899999999999999999999999999999999999999999999999998743210
Q ss_pred --------------------------------C-C---------------------CCCCcCccccCcccccccccCCcc
Q 015455 270 --------------------------------N-H---------------------KHPMTSRVVTLWYRPPELLLGATD 295 (406)
Q Consensus 270 --------------------------------~-~---------------------~~~~~~~~gt~~y~aPE~~~~~~~ 295 (406)
. . .....+++||.+|+|||++.|..
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G- 311 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG- 311 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC-
Confidence 0 0 01234578999999999999866
Q ss_pred CCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCCh
Q 015455 296 YGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSS 375 (406)
Q Consensus 296 ~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (406)
.+.++|||+|||++|||+.|..||.|.+..+.+.+|+..- .++|.. +.++..+
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~----------l~Fp~~-----------------~~vs~~a 364 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQP----------LKFPEE-----------------PEVSSAA 364 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCC----------CcCCCC-----------------CcchhHH
Confidence 8999999999999999999999999999999999997632 222221 2567889
Q ss_pred HHHHHHcccCCCCCCcC----HHHHhcCcccccc
Q 015455 376 LPLIETLLAIDPAERLT----ATVALNSEVSYQF 405 (406)
Q Consensus 376 ~~li~~~L~~dP~~Rpt----a~elL~h~~f~~~ 405 (406)
+|||+++|.+||++|.. |.|+-+||||+.+
T Consensus 365 kDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gV 398 (459)
T KOG0610|consen 365 KDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGV 398 (459)
T ss_pred HHHHHHHhccChhhhhccccchHHhhcCccccCC
Confidence 99999999999999998 9999999999853
No 25
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.7e-50 Score=382.39 Aligned_cols=287 Identities=36% Similarity=0.644 Sum_probs=228.0
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
.++|++.+.||+|+||.||+|++..+++.||+|++...... .....+.+|+.+++.++||||+++++++... ...++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~l 80 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE-GTPFTAIREASLLKGLKHANIVLLHDIIHTK--ETLTL 80 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc-ccchhHHHHHHHHhhCCCCCcCeEEEEEecC--CeEEE
Confidence 37899999999999999999999889999999998754322 2233466799999999999999999998874 46999
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
||||+.+++...+......+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||++....... ..
T Consensus 81 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~ 159 (303)
T cd07869 81 VFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS-HT 159 (303)
T ss_pred EEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC-cc
Confidence 99999999988887766789999999999999999999999999999999999999999999999999997653222 22
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCCHHHhhhcCC-CCcc
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTE-VEQLHKIYKLCGSPSEEYWKKSKL-PNAT 352 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~-~~~~ 352 (406)
.....+|+.|+|||++.+...++.++|||||||++|+|++|..||.+... .+.+..+....+.+....|..... +...
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (303)
T cd07869 160 YSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFK 239 (303)
T ss_pred CCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccc
Confidence 34467899999999987666688999999999999999999999988644 466777777777776655543211 1100
Q ss_pred cCCCCCchhhhhhhhc--CCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 353 LFKPREPYKRCIQETF--KDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
...........+...+ ...++.+.+||.+||+.||++|||+.++|+||||+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~ 294 (303)
T cd07869 240 PERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL 294 (303)
T ss_pred cccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence 0000000000111111 1356789999999999999999999999999999874
No 26
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=5.4e-52 Score=393.13 Aligned_cols=257 Identities=33% Similarity=0.492 Sum_probs=228.5
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
+++|.+.+.||+|+||.||+|+.+.+.+.||+|.+.+........+.+.+|++|++.++|||||.+++.|+. ...+|+
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt--~~~~~v 78 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFET--SAHLWV 78 (808)
T ss_pred CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcc--cceEEE
Confidence 368999999999999999999999999999999999887777778889999999999999999999999988 456999
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
|+||+.|++..++ ..++.++|+.++.++.+++.||.|||+.+|+|||+||.|||++.+|++|+||||+|+....+ ...
T Consensus 79 Vte~a~g~L~~il-~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~-t~v 156 (808)
T KOG0597|consen 79 VTEYAVGDLFTIL-EQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN-TSV 156 (808)
T ss_pred EehhhhhhHHHHH-HhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccC-cee
Confidence 9999999666654 45568999999999999999999999999999999999999999999999999999988654 344
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
.++..|||-|||||+..+. +|+..+|.||+||++|||..|++||....-.+....|..---.++
T Consensus 157 ltsikGtPlYmAPElv~e~-pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p--------------- 220 (808)
T KOG0597|consen 157 LTSIKGTPLYMAPELVEEQ-PYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPP--------------- 220 (808)
T ss_pred eeeccCcccccCHHHHcCC-CccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCc---------------
Confidence 6778899999999988865 599999999999999999999999998877777777765211111
Q ss_pred CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
..++..+.+|++.+|.+||.+|.|=.+++.|||.+..
T Consensus 221 --------------~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 221 --------------STASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred --------------ccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence 2678899999999999999999999999999998754
No 27
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=3.1e-50 Score=398.93 Aligned_cols=282 Identities=32% Similarity=0.499 Sum_probs=227.2
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeec------CC
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSR------MS 189 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~------~~ 189 (406)
.+|++.+.||+|+||.||+|++..+++.||||++.... ....+|+.+|+.++|||||++++++... ..
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 67999999999999999999998999999999886432 1234699999999999999998877432 22
Q ss_pred ceEEEEEecccccHHHHhc---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCC-cEEEeeecccc
Q 015455 190 CSLYLVFHYMEHDLAGLAA---SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDG-VLKIADFGLAS 265 (406)
Q Consensus 190 ~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-~~kl~DFgla~ 265 (406)
.++++||||+++++...+. .....+++..++.++.||+.||+|||+.||+||||||+|||++.++ .+||+|||+|+
T Consensus 140 ~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~ 219 (440)
T PTZ00036 140 IFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAK 219 (440)
T ss_pred eEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccch
Confidence 3578999999998766543 3456899999999999999999999999999999999999999665 79999999998
Q ss_pred ccCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhh
Q 015455 266 FFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK 345 (406)
Q Consensus 266 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 345 (406)
.+..... .....||+.|+|||++.+...|+.++|||||||++|||++|.+||.+.+..+.+..+.+.++.+..+.+..
T Consensus 220 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~ 297 (440)
T PTZ00036 220 NLLAGQR--SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKE 297 (440)
T ss_pred hccCCCC--cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 7654332 34567899999999987766699999999999999999999999999999999999999999888766543
Q ss_pred cCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 346 SKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
..-.......+...............++++++||.+||.+||.+|||+.|+|+||||.++
T Consensus 298 ~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~ 357 (440)
T PTZ00036 298 MNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL 357 (440)
T ss_pred hchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence 221111111111111111122223578899999999999999999999999999999753
No 28
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-51 Score=395.74 Aligned_cols=257 Identities=28% Similarity=0.425 Sum_probs=228.9
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecC-CCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFD-NLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
.-|++.+.||.|+-|.|.+|++..||+.+|||++.+. .........+.+|+-+|+.+.|||+++++++++.. .++|+
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~--~~lyl 89 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENK--QHLYL 89 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccC--ceEEE
Confidence 4578899999999999999999999999999999876 44555566788899999999999999999999984 56999
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
|.||+++|-+..+.-.++++++.+++++++||+.|+.|+|..+|+||||||+|+||+..+++||+|||+|..-.++..
T Consensus 90 vlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gkl-- 167 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKL-- 167 (786)
T ss_pred EEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCCcc--
Confidence 999999877766666677999999999999999999999999999999999999999999999999999987654443
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
..+.||+|.|.|||++.|....+.++||||.|||||.|++|+.||.+.+-...+.++.+.....+
T Consensus 168 LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MP--------------- 232 (786)
T KOG0588|consen 168 LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMP--------------- 232 (786)
T ss_pred ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCC---------------
Confidence 45679999999999999988778999999999999999999999998888888888876533222
Q ss_pred CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
..+|+++++||.+||..||++|+|.+|++.|||+..+
T Consensus 233 --------------s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~ 269 (786)
T KOG0588|consen 233 --------------SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGY 269 (786)
T ss_pred --------------CcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcC
Confidence 3789999999999999999999999999999999754
No 29
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-51 Score=379.63 Aligned_cols=260 Identities=30% Similarity=0.461 Sum_probs=211.1
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
.++...+.||+|+||.||++.+..+|..+|||.+...... ..+.+.+|+.+|.+++|||||+++|.........+++.
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~--~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~ 94 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSP--TSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIF 94 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccch--hHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEee
Confidence 4578889999999999999999888999999998766322 26678899999999999999999997544322468999
Q ss_pred EecccccHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcC-CCcEEEeeeccccccCC--CC
Q 015455 196 FHYMEHDLAGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD-DGVLKIADFGLASFFDP--NH 271 (406)
Q Consensus 196 ~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~-~~~~kl~DFgla~~~~~--~~ 271 (406)
|||+.++.+..+.. .++.+++..++.+.+||++||+|||++|||||||||+|||++. ++.+||+|||+++.... ..
T Consensus 95 mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~ 174 (313)
T KOG0198|consen 95 MEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTK 174 (313)
T ss_pred eeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccccc
Confidence 99999866554444 3448999999999999999999999999999999999999999 79999999999998763 22
Q ss_pred CCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 272 KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGR-TEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 272 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
........||+.|||||++......+.++|||||||++.||+||.+||... ...+.+-.+... ..
T Consensus 175 ~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~---~~----------- 240 (313)
T KOG0198|consen 175 SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRE---DS----------- 240 (313)
T ss_pred ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhcc---CC-----------
Confidence 233456789999999999985322335999999999999999999999873 332322222211 10
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.+..+..+|+++++||.+||..||++||||+++|+|||+++
T Consensus 241 -------------~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 241 -------------LPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred -------------CCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence 11222468899999999999999999999999999999874
No 30
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-51 Score=335.84 Aligned_cols=286 Identities=40% Similarity=0.717 Sum_probs=249.9
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
..|...++||+|.||+||+|++..+++.||+|.++.+..+...-....+|+-+|+.++|+|||+++++...+ ..+-+|
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsd--kkltlv 79 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD--KKLTLV 79 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccC--ceeEEe
Confidence 468888999999999999999999999999999998765544445667899999999999999999988764 459999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
+|||..++..++..-++.+..+.++.++.|+++||.++|++++.|||+||.|.||+.+|++||+|||+++.++-.-. -.
T Consensus 80 fe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvr-cy 158 (292)
T KOG0662|consen 80 FEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR-CY 158 (292)
T ss_pred HHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceE-ee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998864322 23
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhc-CCCCccc
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS-KLPNATL 353 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~ 353 (406)
+..+.|.+|++|.++.|..-|+...|+||.||++.|+.. |++.|+|.+..+++.+|+..+|.|.++.|... ++|+..
T Consensus 159 saevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk- 237 (292)
T KOG0662|consen 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYK- 237 (292)
T ss_pred eceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCc-
Confidence 445679999999999998889999999999999999976 99999999999999999999999999988874 344332
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
.-+..+..-.+....+.++..-+|+++++|.-+|.+|++|+++|+||||.++
T Consensus 238 ~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 238 PYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred ccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 2222333334566667888889999999999999999999999999999864
No 31
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-50 Score=373.88 Aligned_cols=269 Identities=25% Similarity=0.402 Sum_probs=222.3
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
.++|++..+||.|.-++||+|+...++..||||++..+..+.+ .+.+.+|+..|+.++||||++++..|..+ ..+|+
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv~--~~LWv 101 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVVD--SELWV 101 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEec--ceeEE
Confidence 4789999999999999999999999999999999998877655 78899999999999999999999999884 45999
Q ss_pred EEecccccH-HHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC
Q 015455 195 VFHYMEHDL-AGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK 272 (406)
Q Consensus 195 v~e~~~~~l-~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~ 272 (406)
||.||.+|. ++.+.. -...++|..+..+++++++||.|||++|.||||||+.||||+.+|.|||+|||.+..+-....
T Consensus 102 VmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 102 VMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred eehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 999999754 444322 223599999999999999999999999999999999999999999999999998876643332
Q ss_pred C---CCcCccccCccccccc-ccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCC
Q 015455 273 H---PMTSRVVTLWYRPPEL-LLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348 (406)
Q Consensus 273 ~---~~~~~~gt~~y~aPE~-~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 348 (406)
. .....+||++|||||+ ......|+.|+||||||++..||++|+.||....+...+..- +.+.|+.-. ..
T Consensus 182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~t--Lqn~pp~~~--t~-- 255 (516)
T KOG0582|consen 182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLT--LQNDPPTLL--TS-- 255 (516)
T ss_pred eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHH--hcCCCCCcc--cc--
Confidence 1 1145689999999999 445566999999999999999999999999988776655433 333343211 00
Q ss_pred CCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 349 PNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
..-.+..+.++..++++|..||.+||++||||+++|+|+||++.
T Consensus 256 -------------~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~ 299 (516)
T KOG0582|consen 256 -------------GLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKA 299 (516)
T ss_pred -------------cCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhc
Confidence 01123335678899999999999999999999999999999863
No 32
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1e-49 Score=382.57 Aligned_cols=288 Identities=35% Similarity=0.524 Sum_probs=228.7
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecC---CceEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRM---SCSLY 193 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~---~~~~~ 193 (406)
+|++.+.||+|+||.||+|++..+|+.||||++............+.+|+++++.++||||+++++++.... ...+|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 489999999999999999999999999999998754333334456788999999999999999999885432 23589
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC-
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK- 272 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~- 272 (406)
++|||+++++...+.. ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 81 lv~e~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 159 (338)
T cd07859 81 VVFELMESDLHQVIKA-NDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 159 (338)
T ss_pred EEEecCCCCHHHHHHh-cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCc
Confidence 9999999888776544 34699999999999999999999999999999999999999999999999999986532211
Q ss_pred -CCCcCccccCcccccccccCC-ccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 273 -HPMTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 273 -~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
.......||+.|+|||++.+. ..++.++|||||||++|+|++|++||.+.+....+..+....+.++...+.......
T Consensus 160 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 239 (338)
T cd07859 160 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEK 239 (338)
T ss_pred cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhh
Confidence 112346789999999987652 348899999999999999999999999999888888888888888765543322110
Q ss_pred ccc--CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 351 ATL--FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 351 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
... ..............++.+++.+.++|.+||+.||++|||+.++|+||||+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~ 296 (338)
T cd07859 240 ARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGL 296 (338)
T ss_pred HHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhc
Confidence 000 0000000011223345678889999999999999999999999999999764
No 33
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.8e-50 Score=390.56 Aligned_cols=278 Identities=31% Similarity=0.547 Sum_probs=228.9
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCC-C-----CCeeeEeeeeeecCCc
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD-H-----PNVIKLEGLVTSRMSC 190 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h-----~~iv~l~~~~~~~~~~ 190 (406)
+|++.+.||+|+||.|.+|.+..+++.||||+++.. .....+-..|+.+|..|+ | -|+|+++++|..+ .
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~---k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr--~ 261 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK---KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFR--N 261 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC---hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccc--c
Confidence 689999999999999999999999999999999743 344556667999999996 3 6999999999995 5
Q ss_pred eEEEEEecccccHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCC--cEEEeeecccccc
Q 015455 191 SLYLVFHYMEHDLAGLAASPE-VKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDG--VLKIADFGLASFF 267 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~--~~kl~DFgla~~~ 267 (406)
++|||+|.++.+|.+++...+ ..++...++.++.||+.||.+||+.||||+||||+||||.+.+ .|||+|||+|+..
T Consensus 262 HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 262 HLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred ceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 699999999999999886544 5699999999999999999999999999999999999997543 7999999999976
Q ss_pred CCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcC
Q 015455 268 DPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347 (406)
Q Consensus 268 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 347 (406)
... ...++.+..|+|||++.|.+ |+.+.|+||||||++||++|.++|+|.++.+++..|++.+|.|+..++...+
T Consensus 342 ~q~----vytYiQSRfYRAPEVILGlp-Y~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~ 416 (586)
T KOG0667|consen 342 SQR----VYTYIQSRFYRAPEVILGLP-YDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAK 416 (586)
T ss_pred CCc----ceeeeeccccccchhhccCC-CCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhcc
Confidence 432 34778899999999999976 9999999999999999999999999999999999999999999988766543
Q ss_pred CCCcccCC-------------C---C----------------Cc-hhhhhhhhcC-CCCCChHHHHHHcccCCCCCCcCH
Q 015455 348 LPNATLFK-------------P---R----------------EP-YKRCIQETFK-DFPPSSLPLIETLLAIDPAERLTA 393 (406)
Q Consensus 348 ~~~~~~~~-------------~---~----------------~~-~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpta 393 (406)
....-+.. . . .+ -...+..... .-...+.|||.+||.+||.+|+|+
T Consensus 417 ~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp 496 (586)
T KOG0667|consen 417 KAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITP 496 (586)
T ss_pred ccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCH
Confidence 21110000 0 0 00 0000111111 112347999999999999999999
Q ss_pred HHHhcCccccc
Q 015455 394 TVALNSEVSYQ 404 (406)
Q Consensus 394 ~elL~h~~f~~ 404 (406)
.++|+||||..
T Consensus 497 ~qal~Hpfl~~ 507 (586)
T KOG0667|consen 497 AQALNHPFLTG 507 (586)
T ss_pred HHHhcCccccc
Confidence 99999999984
No 34
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-51 Score=358.47 Aligned_cols=261 Identities=31% Similarity=0.447 Sum_probs=230.9
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC------ChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecC
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL------EPESVKFMAREILILRRL-DHPNVIKLEGLVTSRM 188 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~ 188 (406)
+.|.-.+.||+|..++|.++.++.+|+.+|+|++..... ..+..+...+|+.||+++ .||+|+++.++|+.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes-- 94 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES-- 94 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC--
Confidence 467888999999999999999999999999999865322 223445666899999998 79999999999987
Q ss_pred CceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccC
Q 015455 189 SCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD 268 (406)
Q Consensus 189 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~ 268 (406)
...+++|+|.|..+-+.........+++...+.+++|+++|++|||.++||||||||+|||++++.++||+|||+|+.+.
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~ 174 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLE 174 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccC
Confidence 56699999999988777777888899999999999999999999999999999999999999999999999999999997
Q ss_pred CCCCCCCcCccccCccccccccc-----CCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHh
Q 015455 269 PNHKHPMTSRVVTLWYRPPELLL-----GATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYW 343 (406)
Q Consensus 269 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 343 (406)
++.. ....||||+|+|||.+. +.+.|+..+|+|++|||||-|+.|.+||......-.+..|++....+....|
T Consensus 175 ~Gek--LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speW 252 (411)
T KOG0599|consen 175 PGEK--LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEW 252 (411)
T ss_pred Cchh--HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcch
Confidence 7765 56789999999999885 3355889999999999999999999999999888889999887665554433
Q ss_pred hhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 344 KKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
.+++..++|||.+||+.||.+|.|++|+|+||||.++
T Consensus 253 -------------------------adis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~ 289 (411)
T KOG0599|consen 253 -------------------------ADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQI 289 (411)
T ss_pred -------------------------hhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHH
Confidence 5789999999999999999999999999999999765
No 35
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2.7e-49 Score=371.61 Aligned_cols=281 Identities=38% Similarity=0.668 Sum_probs=224.9
Q ss_pred CCcceeeeeccCCceEEEEEEEcc-CCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC---CCCCeeeEeeeeee---cC
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDML-TGKIVALKKVRFDNLEPESVKFMAREILILRRL---DHPNVIKLEGLVTS---RM 188 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~~iv~l~~~~~~---~~ 188 (406)
++|++.+.||+|+||+||+|++.. +++.||+|.++...........+.+|+.+++.+ +||||+++++++.. ..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 369999999999999999999754 468899999876543333334455677777665 69999999998853 23
Q ss_pred CceEEEEEecccccHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeecccccc
Q 015455 189 SCSLYLVFHYMEHDLAGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF 267 (406)
Q Consensus 189 ~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~ 267 (406)
...++++|||+++++...+.. ....+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++...
T Consensus 81 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T cd07862 81 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY 160 (290)
T ss_pred CCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEec
Confidence 456899999999988877654 3346899999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhc-
Q 015455 268 DPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS- 346 (406)
Q Consensus 268 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~- 346 (406)
... .......||+.|+|||++.+.. ++.++|||||||++|||++|++||.+.+..+.+..+....+.+....|...
T Consensus 161 ~~~--~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 237 (290)
T cd07862 161 SFQ--MALTSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 237 (290)
T ss_pred cCC--cccccccccccccChHHHhCCC-CCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhh
Confidence 433 2234567899999999987654 899999999999999999999999999999999999998887766554332
Q ss_pred CCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 347 KLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
.++.... ... -...+....+.+++.+.+||.+||+.||++|||+.++|+||||
T Consensus 238 ~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 238 ALPRQAF-HSK--SAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred cccchhc-cCC--CCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 1111111 000 0112333445788899999999999999999999999999998
No 36
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.8e-49 Score=375.14 Aligned_cols=287 Identities=34% Similarity=0.650 Sum_probs=235.5
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
+++|.+.+.||+|+||.||+|++..+++.||+|.++..... .....+.+|+.++++++||||+++++++... ...++
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~l 81 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIVHTD--KSLTL 81 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC-CcchhHHHHHHHHHhCCCCCcceEEEEEeeC--CeEEE
Confidence 37899999999999999999999899999999998765432 2233466799999999999999999998874 45999
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
+|||+++++...+......+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||++........ .
T Consensus 82 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~ 160 (309)
T cd07872 82 VFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK-T 160 (309)
T ss_pred EEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc-c
Confidence 999999998888776666789999999999999999999999999999999999999999999999999976543222 1
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc-
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL- 353 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~- 353 (406)
.....+|+.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+.+..+.+..+.|..........
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07872 161 YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKN 240 (309)
T ss_pred cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhh
Confidence 2345679999999998766668999999999999999999999999999999999999999988887765432211100
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
..........+....+.+++++.+||.+||+.||.+|||+.|+|+||||+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~ 292 (309)
T cd07872 241 YNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSL 292 (309)
T ss_pred hhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhc
Confidence 0000000111222335688899999999999999999999999999999863
No 37
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-50 Score=385.09 Aligned_cols=256 Identities=27% Similarity=0.491 Sum_probs=222.7
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
..|....+||+|+-|.||.++...+++.||||.+.+.... ..+.+.+|+.+|+..+|+|||++++.|... ..+|+|
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~--~keLilnEi~Vm~~~~H~NiVnfl~Sylv~--deLWVV 348 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP--KKELLLNEILVMRDLHHPNIVNFLDSYLVG--DELWVV 348 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCC--chhhhHHHHHHHHhccchHHHHHHHHhccc--ceeEEE
Confidence 5688899999999999999999999999999999876533 356788999999999999999999988764 459999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
||||+|+.+....... .++|.++..++++++.||+|||.+||+|||||.+|||++.+|.+||+|||+|..+...... .
T Consensus 349 MEym~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~K-R 426 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSK-R 426 (550)
T ss_pred EeecCCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCc-c
Confidence 9999997766555443 5999999999999999999999999999999999999999999999999999998766543 4
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCC
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFK 355 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 355 (406)
.+.+|||.|||||+..... |+++.||||||++++||+-|.+||-..+....+..|... |.|.-
T Consensus 427 ~TmVGTPYWMAPEVvtrk~-YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~n-g~P~l--------------- 489 (550)
T KOG0578|consen 427 STMVGTPYWMAPEVVTRKP-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPKL--------------- 489 (550)
T ss_pred ccccCCCCccchhhhhhcc-cCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhc-CCCCc---------------
Confidence 5678999999999987755 999999999999999999999999998887777776542 22221
Q ss_pred CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 356 PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.....+|+.+++|+.+||..||.+|++|.|||+||||+.
T Consensus 490 ----------k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 490 ----------KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKM 528 (550)
T ss_pred ----------CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence 111378999999999999999999999999999999963
No 38
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.9e-49 Score=383.83 Aligned_cols=287 Identities=33% Similarity=0.489 Sum_probs=231.9
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecC---CceEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRM---SCSLY 193 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~---~~~~~ 193 (406)
+|++.+.||+|+||.||+|.+..+|+.||||++............+.+|+.+++.++||||+++++++.... ....|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478899999999999999999899999999998654333444567888999999999999999999987643 12589
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
++|||+.+++...+.. ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.........
T Consensus 81 lv~e~~~~~l~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~ 159 (372)
T cd07853 81 VVTELMQSDLHKIIVS-PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK 159 (372)
T ss_pred EEeeccccCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccc
Confidence 9999999888776644 347999999999999999999999999999999999999999999999999999876544333
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCc--
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA-- 351 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-- 351 (406)
......+|+.|+|||++.+...++.++|||||||++|||++|+.||.+.+..+.+..+.+..+.++.+.+........
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 239 (372)
T cd07853 160 HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAH 239 (372)
T ss_pred cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHH
Confidence 344557899999999988766689999999999999999999999999999999999999999887654432110000
Q ss_pred -ccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 352 -TLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 352 -~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.......+............++++.+||.+||+.||.+|||+.++|+||||..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 293 (372)
T cd07853 240 ILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDE 293 (372)
T ss_pred HHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCC
Confidence 00000001111111223456788999999999999999999999999999975
No 39
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=7.4e-49 Score=380.07 Aligned_cols=285 Identities=32% Similarity=0.520 Sum_probs=227.8
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCC----c
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMS----C 190 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~----~ 190 (406)
.++|++.+.||+|+||.||+|++..+|+.||+|++............+.+|+.+++.++||||+++++++..... .
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 378999999999999999999999999999999997654444555677789999999999999999998865322 3
Q ss_pred eEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 191 SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
.+|++|||+++++...+.. .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus 100 ~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~ 176 (359)
T cd07876 100 DVYLVMELMDANLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN 176 (359)
T ss_pred eeEEEEeCCCcCHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccC
Confidence 5799999999988776533 5889999999999999999999999999999999999999999999999999765332
Q ss_pred CCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcC---
Q 015455 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK--- 347 (406)
Q Consensus 271 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~--- 347 (406)
. ......||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+..+....+.+..+.+..+.+....
T Consensus 177 ~--~~~~~~~t~~y~aPE~~~~~~-~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (359)
T cd07876 177 F--MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTV 253 (359)
T ss_pred c--cCCCCcccCCCCCchhccCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 2 234567899999999987754 8999999999999999999999999999888888888888887765433211
Q ss_pred ------CCCcccCCCCCchhh----hhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 348 ------LPNATLFKPREPYKR----CIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 348 ------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
.+..........+.. .........++.+.+||.+||+.||++|||+.|+|+||||..+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 321 (359)
T cd07876 254 RNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVW 321 (359)
T ss_pred HHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhh
Confidence 000000000000000 0001112346789999999999999999999999999999754
No 40
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2.2e-49 Score=372.70 Aligned_cols=254 Identities=24% Similarity=0.341 Sum_probs=214.5
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
++|++.+.||+|+||.||+|++..+|+.||+|++..... .......+.+|+.+++.++||||+++++++.+ ...+|+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~l 78 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHD--QRFLYM 78 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhcc--CCeEEE
Confidence 369999999999999999999988999999999975432 22345567889999999999999999988876 456999
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
+|||+.++.+.........+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~---- 154 (291)
T cd05612 79 LMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR---- 154 (291)
T ss_pred EEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC----
Confidence 9999987655444444557999999999999999999999999999999999999999999999999999876432
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
.....||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+..+....+..... .
T Consensus 155 ~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~----------~------- 216 (291)
T cd05612 155 TWTLCGTPEYLAPEVIQSKG-HNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKL----------E------- 216 (291)
T ss_pred cccccCChhhcCHHHHcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc----------C-------
Confidence 23457899999999987654 89999999999999999999999999887777766654211 0
Q ss_pred CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcC-----HHHHhcCcccccc
Q 015455 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT-----ATVALNSEVSYQF 405 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----a~elL~h~~f~~~ 405 (406)
....+++.+.+||++||+.||.+||+ +.++++||||+.+
T Consensus 217 ------------~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 260 (291)
T cd05612 217 ------------FPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSV 260 (291)
T ss_pred ------------CCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCC
Confidence 11246778999999999999999995 9999999999753
No 41
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=3.5e-49 Score=377.74 Aligned_cols=254 Identities=26% Similarity=0.353 Sum_probs=215.5
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~ 193 (406)
.++|++.+.||+|+||.||+|++..+++.||+|++..... .......+.+|+.++++++||||+++++++... ..+|
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~~~ 94 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDE--NRVY 94 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcC--CEEE
Confidence 4789999999999999999999999999999999975432 223456688899999999999999999998874 5699
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
++|||+.++.+.........+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 95 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--- 171 (329)
T PTZ00263 95 FLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR--- 171 (329)
T ss_pred EEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC---
Confidence 99999988665555555568999999999999999999999999999999999999999999999999999876432
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
.....||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+..+....+..... .+
T Consensus 172 -~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~----------~~----- 234 (329)
T PTZ00263 172 -TFTLCGTPEYLAPEVIQSKG-HGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRL----------KF----- 234 (329)
T ss_pred -cceecCChhhcCHHHHcCCC-CCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCc----------CC-----
Confidence 23457899999999987754 89999999999999999999999998877766666543210 00
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcC-----HHHHhcCccccc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT-----ATVALNSEVSYQ 404 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----a~elL~h~~f~~ 404 (406)
...+++.+.+||.+||+.||.+||+ ++++++||||..
T Consensus 235 --------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~ 276 (329)
T PTZ00263 235 --------------PNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHG 276 (329)
T ss_pred --------------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence 1246778999999999999999997 799999999975
No 42
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.8e-48 Score=364.16 Aligned_cols=280 Identities=37% Similarity=0.660 Sum_probs=224.2
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC---CCCCeeeEeeeeeec---CCc
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL---DHPNVIKLEGLVTSR---MSC 190 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~~iv~l~~~~~~~---~~~ 190 (406)
+|++.+.||+|+||.||+|++..+|+.||+|.++.............+|+.+++.+ +||||+++++++... ...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 48899999999999999999999999999999876433222223345577766655 799999999987642 235
Q ss_pred eEEEEEecccccHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCC
Q 015455 191 SLYLVFHYMEHDLAGLAASP-EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDP 269 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~ 269 (406)
.++++|||+.+++...+... ...+++..++.++.|++.||.|||+.|++||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd07863 81 KVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSC 160 (288)
T ss_pred eEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccC
Confidence 68999999999887766543 34589999999999999999999999999999999999999999999999999987643
Q ss_pred CCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhc-CC
Q 015455 270 NHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS-KL 348 (406)
Q Consensus 270 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~ 348 (406)
... .....+|+.|+|||++.+.. ++.++|||||||++|+|++|++||.+....+.+.++....+.+....|... ..
T Consensus 161 ~~~--~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07863 161 QMA--LTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTL 237 (288)
T ss_pred ccc--CCCccccccccCchHhhCCC-CCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccc
Confidence 222 24457899999999987654 899999999999999999999999999998999999988887766554431 11
Q ss_pred CCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 349 PNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
+... +. ......+....+.+++.+.+||.+||++||.+|||+.++|.||||
T Consensus 238 ~~~~-~~--~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 238 PRGA-FS--PRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred cccc-cC--CCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 1111 10 111122334445788889999999999999999999999999998
No 43
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.6e-48 Score=367.11 Aligned_cols=287 Identities=37% Similarity=0.675 Sum_probs=235.0
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
.++|++.+.||+|+||.||+|++..+++.||+|.+...... .....+.+|+.+++.++||||+++++++... ...++
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~--~~~~l 81 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTE--KSLTL 81 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEecC--CeEEE
Confidence 47899999999999999999999889999999998755322 2233566799999999999999999998874 46999
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
+|||+.+++...+......+++..++.++.||+.||.|||+.||+|+||||+|||++.++.++|+|||++........ .
T Consensus 82 v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~ 160 (301)
T cd07873 82 VFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-T 160 (301)
T ss_pred EEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC-c
Confidence 999999988887776666899999999999999999999999999999999999999999999999999976542221 1
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCc-cc
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA-TL 353 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~ 353 (406)
.....+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+....+....+.+....|........ ..
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (301)
T cd07873 161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKS 240 (301)
T ss_pred ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccc
Confidence 23346789999999987666688899999999999999999999999998889999998888887766654311110 00
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
.........+.....+.+++.+.+||.+||+.||.+|||+.++|+||||+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~ 292 (301)
T cd07873 241 YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCL 292 (301)
T ss_pred cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 0111111222334445788899999999999999999999999999999864
No 44
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-49 Score=376.42 Aligned_cols=257 Identities=34% Similarity=0.500 Sum_probs=224.1
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCC-CCCeeeEeeeeeecCCceEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLD-HPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~l~~~~~~~~~~~~~ 193 (406)
+.|++.+.||+|.||.||+|+.+.+|+.+|+|.+.+... .....+.+.+|+.+|+++. |||||.++++|++.. .++
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~--~~~ 112 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD--SVY 112 (382)
T ss_pred ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC--eEE
Confidence 679999999999999999999999999999999987655 2334567889999999998 999999999999854 699
Q ss_pred EEEecccccHHH-HhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCC----CcEEEeeeccccccC
Q 015455 194 LVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDD----GVLKIADFGLASFFD 268 (406)
Q Consensus 194 lv~e~~~~~l~~-~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~----~~~kl~DFgla~~~~ 268 (406)
+|||++.|+.+. .+... .+++..+..++.|++.|+.|||+.||+||||||+|+|+... +.+|++|||++....
T Consensus 113 lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~ 190 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK 190 (382)
T ss_pred EEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence 999999976554 33333 49999999999999999999999999999999999999633 579999999999987
Q ss_pred CCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCC
Q 015455 269 PNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348 (406)
Q Consensus 269 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 348 (406)
. .......+||+.|+|||++... .|+..+|+||+||++|.|++|.+||.+.+.......|..........
T Consensus 191 ~--~~~~~~~~Gtp~y~APEvl~~~-~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~------- 260 (382)
T KOG0032|consen 191 P--GERLHTIVGTPEYVAPEVLGGR-PYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSE------- 260 (382)
T ss_pred C--CceEeeecCCccccCchhhcCC-CCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCC-------
Confidence 6 3345778999999999998764 49999999999999999999999999999999888887754433332
Q ss_pred CCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 349 PNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.++.++..+.+||+.||..||.+|+|+.++|+|||++.
T Consensus 261 ------------------~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~ 298 (382)
T KOG0032|consen 261 ------------------PWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKS 298 (382)
T ss_pred ------------------CccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccC
Confidence 33578999999999999999999999999999999975
No 45
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=4.3e-49 Score=376.20 Aligned_cols=250 Identities=26% Similarity=0.379 Sum_probs=209.8
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEeccc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYME 200 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~ 200 (406)
+.||+|+||.||+|++..+|+.||+|++..... .......+.+|+.+++.++||||+++++++.. ...+|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~--~~~~~lv~e~~~ 78 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQT--HDRLCFVMEYAN 78 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEc--CCEEEEEEeCCC
Confidence 369999999999999999999999999976432 23445567789999999999999999998877 456999999999
Q ss_pred ccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCccc
Q 015455 201 HDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280 (406)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~g 280 (406)
++.+.........+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++...... ......+|
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~-~~~~~~~g 157 (323)
T cd05571 79 GGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG-ATMKTFCG 157 (323)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC-Ccccceec
Confidence 87666555556689999999999999999999999999999999999999999999999999987542221 22344679
Q ss_pred cCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCch
Q 015455 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPY 360 (406)
Q Consensus 281 t~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (406)
|+.|+|||++.+.. ++.++|||||||++|||++|+.||.+.+.......+..... .+
T Consensus 158 t~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~----------~~------------ 214 (323)
T cd05571 158 TPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI----------RF------------ 214 (323)
T ss_pred CccccChhhhcCCC-CCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC----------CC------------
Confidence 99999999987654 89999999999999999999999998877666555533110 01
Q ss_pred hhhhhhhcCCCCCChHHHHHHcccCCCCCCc-----CHHHHhcCccccc
Q 015455 361 KRCIQETFKDFPPSSLPLIETLLAIDPAERL-----TATVALNSEVSYQ 404 (406)
Q Consensus 361 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----ta~elL~h~~f~~ 404 (406)
...+++++.+||.+||+.||++|| ++.++++||||..
T Consensus 215 -------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~ 256 (323)
T cd05571 215 -------PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFAS 256 (323)
T ss_pred -------CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 125788899999999999999999 8999999999975
No 46
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.1e-49 Score=382.66 Aligned_cols=279 Identities=24% Similarity=0.323 Sum_probs=216.8
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
..+|++++.||+|+||.||+|++..+++.||+|.... ..+.+|++++++++|||||++++++... ...++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~~--~~~~l 160 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTYN--KFTCL 160 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEEC--CeeEE
Confidence 3679999999999999999999999999999996432 2356799999999999999999999874 46899
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
++|++.+++...+... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.........
T Consensus 161 v~e~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~ 239 (391)
T PHA03212 161 ILPRYKTDLYCYLAAK-RNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANK 239 (391)
T ss_pred EEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccc
Confidence 9999998887766543 468999999999999999999999999999999999999999999999999997643333233
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCC-------ChHHHHHHHHHHhCCCCHHHhhhcC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGR-------TEVEQLHKIYKLCGSPSEEYWKKSK 347 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~-------~~~~~~~~i~~~~~~~~~~~~~~~~ 347 (406)
.....||+.|+|||++.+. .++.++|||||||++|||++|+.||... .....+..+.+..+.++.++.....
T Consensus 240 ~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~ 318 (391)
T PHA03212 240 YYGWAGTIATNAPELLARD-PYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ 318 (391)
T ss_pred cccccCccCCCChhhhcCC-CCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence 3456799999999998765 4899999999999999999999887543 2345677777777765543210000
Q ss_pred C--CC----cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 348 L--PN----ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 348 ~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
. .. ........+...........++.++.+||.+||+.||.+||||.|+|+||||+++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~ 382 (391)
T PHA03212 319 ANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDI 382 (391)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccC
Confidence 0 00 0000000000000111122467789999999999999999999999999999864
No 47
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.9e-48 Score=377.87 Aligned_cols=285 Identities=29% Similarity=0.515 Sum_probs=228.1
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecC----Cc
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRM----SC 190 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~----~~ 190 (406)
.++|++.+.||+|+||.||+|.+..+++.||||++............+.+|+.+++.++||||+++++++.... ..
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 37899999999999999999999999999999998765444445566778999999999999999999875432 23
Q ss_pred eEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 191 SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
.+|+||||+++++...+.. .+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 103 ~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 179 (364)
T cd07875 103 DVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179 (364)
T ss_pred eEEEEEeCCCCCHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCC
Confidence 5799999999988876643 5889999999999999999999999999999999999999999999999999876433
Q ss_pred CCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcC---
Q 015455 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK--- 347 (406)
Q Consensus 271 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~--- 347 (406)
. ......+|+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+..+....+.+..+.+..+.+....
T Consensus 180 ~--~~~~~~~t~~y~aPE~~~~~~-~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (364)
T cd07875 180 F--MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 256 (364)
T ss_pred C--cccCCcccCCcCCHHHHhCCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHH
Confidence 2 234567899999999987754 8999999999999999999999999999999999999888887765433321
Q ss_pred ------CCCcccCCCCCchh----hhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 348 ------LPNATLFKPREPYK----RCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 348 ------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
.+..........+. ..........++.+++||.+||+.||.+|||+.++|+||||..+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~ 324 (364)
T cd07875 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324 (364)
T ss_pred HHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence 11100000000000 00011112245678999999999999999999999999999864
No 48
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.1e-50 Score=343.09 Aligned_cols=255 Identities=32% Similarity=0.452 Sum_probs=224.0
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC-hHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-PESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~ 193 (406)
.++|++.+.||+|-||.||+|+...++-.||+|++-++.+. .....++.+|++|-..|+||||++++++|.+. ...|
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~--~riy 98 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS--KRIY 98 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecc--ceeE
Confidence 47899999999999999999999999999999999876552 23345688999999999999999999999985 4599
Q ss_pred EEEecccccH-HHHhc-CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC
Q 015455 194 LVFHYMEHDL-AGLAA-SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 194 lv~e~~~~~l-~~~~~-~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~ 271 (406)
+++||...+. ...+. .+..++++..++.++.|++.||.|+|..+++||||||+|+|++.++.+||+|||.+.....+
T Consensus 99 LilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~- 177 (281)
T KOG0580|consen 99 LILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSN- 177 (281)
T ss_pred EEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCC-
Confidence 9999998754 44333 46678999999999999999999999999999999999999999999999999999865422
Q ss_pred CCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCc
Q 015455 272 KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351 (406)
Q Consensus 272 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 351 (406)
.....+||..|.|||...+.. ++..+|+|++|++.||++.|.+||...+..+.+++|.+.-...+
T Consensus 178 --kR~tlcgt~dyl~pEmv~~~~-hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p------------ 242 (281)
T KOG0580|consen 178 --KRKTLCGTLDYLPPEMVEGRG-HDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP------------ 242 (281)
T ss_pred --CceeeecccccCCHhhcCCCC-ccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC------------
Confidence 246779999999999888765 99999999999999999999999999999999999988532222
Q ss_pred ccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 352 TLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
..++.++.|+|..||.++|.+|.+..|++.|||+..
T Consensus 243 -----------------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 243 -----------------STISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred -----------------cccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 278999999999999999999999999999999864
No 49
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2.8e-48 Score=363.49 Aligned_cols=282 Identities=40% Similarity=0.693 Sum_probs=229.6
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~ 196 (406)
+|++.+.||+|+||.||+|++..+|+.||+|.+............+.+|+.+++.++||||+++++++.+. ...++++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~--~~~~lv~ 78 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSD--KKLTLVF 78 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccC--CceEEEE
Confidence 48899999999999999999999999999999976544333345567799999999999999999998774 4699999
Q ss_pred ecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCc
Q 015455 197 HYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMT 276 (406)
Q Consensus 197 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~ 276 (406)
||+++++...+......+++..++.++.||+.||.|||+.|++||||||+||+++.++.++|+|||++........ ...
T Consensus 79 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~ 157 (284)
T cd07839 79 EYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR-CYS 157 (284)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC-CcC
Confidence 9999998887776667899999999999999999999999999999999999999999999999999987643322 223
Q ss_pred CccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCC-CCCCChHHHHHHHHHHhCCCCHHHhhhcC-CCCcccC
Q 015455 277 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPI-MPGRTEVEQLHKIYKLCGSPSEEYWKKSK-LPNATLF 354 (406)
Q Consensus 277 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~p-f~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~ 354 (406)
...+++.|+|||++.+...++.++|||||||++|+|++|..| |.+.+..+.+..+.+..+.+....|.... .+....
T Consensus 158 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 236 (284)
T cd07839 158 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKP- 236 (284)
T ss_pred CCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccc-
Confidence 456789999999987766578999999999999999998877 56677778888888888877765554321 111111
Q ss_pred CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
.+.......+....+.+++++.+||.+||+.||.+|||++++|.||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 237 YPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred cCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 111111112234445788999999999999999999999999999998
No 50
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=4.7e-48 Score=361.95 Aligned_cols=283 Identities=40% Similarity=0.690 Sum_probs=228.9
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~ 196 (406)
+|++.+.||+|+||.||+|++..+++.||+|.+............+.+|+.+++.++||||+++++++.. ....|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~ 78 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQ--ESRLYLIF 78 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEee--CCeEEEEE
Confidence 4889999999999999999998899999999987654443444567789999999999999999999987 45689999
Q ss_pred ecccccHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 197 HYMEHDLAGLAAS--PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 197 e~~~~~l~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
||+.+++...+.. .+..+++..++.++.||+.||.|||+.|++|+||||+|||++.++.++|+|||++....... ..
T Consensus 79 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-~~ 157 (285)
T cd07861 79 EFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV-RV 157 (285)
T ss_pred ecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc-cc
Confidence 9999887776543 23579999999999999999999999999999999999999999999999999998654332 12
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
.....+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+.......+.+..+.+....|...........
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (285)
T cd07861 158 YTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKN 237 (285)
T ss_pred ccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHh
Confidence 23446789999999987666678999999999999999999999999888888888888777776655543221110000
Q ss_pred CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
................+++++.+||.+||+.||.+|||+.++++||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 238 TFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 000111122333445688999999999999999999999999999998
No 51
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2.6e-48 Score=375.70 Aligned_cols=285 Identities=31% Similarity=0.518 Sum_probs=227.3
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecC----Cc
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRM----SC 190 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~----~~ 190 (406)
.++|++.+.||+|+||.||+|.+..+++.||+|.+............+.+|+.+++.++||||+++++++.... ..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 95 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQ 95 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccc
Confidence 47899999999999999999999899999999998765444555667778999999999999999999886432 23
Q ss_pred eEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 191 SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
..|++|||+++++...+.. .+++..++.++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++.....
T Consensus 96 ~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~ 172 (355)
T cd07874 96 DVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 172 (355)
T ss_pred eeEEEhhhhcccHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCc
Confidence 5799999999988776643 5889999999999999999999999999999999999999999999999999875433
Q ss_pred CCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcC---
Q 015455 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK--- 347 (406)
Q Consensus 271 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~--- 347 (406)
. ......+|+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+..+....+.+..+.+..+.+....
T Consensus 173 ~--~~~~~~~t~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (355)
T cd07874 173 F--MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 249 (355)
T ss_pred c--ccCCccccCCccCHHHHcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHH
Confidence 2 234567899999999987654 8999999999999999999999999999888888888888877655433211
Q ss_pred ------CCCcccCCCCCchh----hhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 348 ------LPNATLFKPREPYK----RCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 348 ------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
.+............ ..-.......+..+.+||.+||+.||++|||+.|+|+||||+.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW 317 (355)
T ss_pred HHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence 00000000000000 00001112345678999999999999999999999999999754
No 52
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-48 Score=370.09 Aligned_cols=252 Identities=31% Similarity=0.427 Sum_probs=212.6
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcE-EEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKI-VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~-vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
+.+.+.+.||+|+||+||+|. ..|+. ||+|++..........+.+.+|+.+|.+++|||||+++|++..+.. .+.+
T Consensus 41 ~~l~~~~~iG~G~~g~V~~~~--~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~-~~~i 117 (362)
T KOG0192|consen 41 DELPIEEVLGSGSFGTVYKGK--WRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG-SLCI 117 (362)
T ss_pred HHhhhhhhcccCCceeEEEEE--eCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC-ceEE
Confidence 456667779999999999996 56666 9999998776665557789999999999999999999999988642 5899
Q ss_pred EEecccccHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHCC-CeeccCCCCCeEEcCCC-cEEEeeeccccccCCC
Q 015455 195 VFHYMEHDLAGLAASP--EVKFTEPQVKCYMHQLLSGLEHCHNNG-VLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPN 270 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~-~~kl~DFgla~~~~~~ 270 (406)
||||++++.+..+... +..+++..+..++.||+.||.|||+.+ ||||||||+|||++.++ ++||+|||+++.....
T Consensus 118 VtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~ 197 (362)
T KOG0192|consen 118 VTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS 197 (362)
T ss_pred EEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence 9999998776655544 779999999999999999999999999 99999999999999998 9999999999877543
Q ss_pred CCCCCcCccccCcccccccccC-CccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCC
Q 015455 271 HKHPMTSRVVTLWYRPPELLLG-ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLP 349 (406)
Q Consensus 271 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 349 (406)
. ...+...||+.|||||++.+ ...|+.++||||||+++|||+||+.||.+....+....+.....+|.-
T Consensus 198 ~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~--------- 267 (362)
T KOG0192|consen 198 K-TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPI--------- 267 (362)
T ss_pred c-ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCC---------
Confidence 2 22445789999999999985 245999999999999999999999999999986665555443222211
Q ss_pred CcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 350 NATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
....++.+.+||..||+.||.+||+..+++.
T Consensus 268 ------------------p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 268 ------------------PKECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred ------------------CccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 1247888999999999999999999998875
No 53
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3e-48 Score=363.93 Aligned_cols=259 Identities=24% Similarity=0.385 Sum_probs=210.7
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC-hHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-PESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
.|+..+.||+|+||.||+|.+..+|+.||+|.+...... ......+.+|+.++..++|+||+++.+++... ...+++
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~--~~~~lv 78 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETK--DALCLV 78 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccC--CeEEEE
Confidence 378899999999999999999999999999998765432 22334567899999999999999999988764 469999
Q ss_pred EecccccHHH-Hhc-CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 196 FHYMEHDLAG-LAA-SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 196 ~e~~~~~l~~-~~~-~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
|||++++.+. .+. .....+++..+..++.|++.||+|||+.||+||||||+|||++.++.++|+|||++........
T Consensus 79 ~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 157 (285)
T cd05631 79 LTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET- 157 (285)
T ss_pred EEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCe-
Confidence 9999976554 332 2334689999999999999999999999999999999999999999999999999987643222
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
.....||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+.......+........
T Consensus 158 -~~~~~g~~~y~aPE~~~~~~-~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-------------- 221 (285)
T cd05631 158 -VRGRVGTVGYMAPEVINNEK-YTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQ-------------- 221 (285)
T ss_pred -ecCCCCCCCccCHhhhcCCC-CCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhccc--------------
Confidence 24557899999999998654 89999999999999999999999988765443333332211110
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcC-----HHHHhcCcccccc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT-----ATVALNSEVSYQF 405 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----a~elL~h~~f~~~ 405 (406)
......+++.+.+||++||+.||.+||| ++++++||||...
T Consensus 222 -----------~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05631 222 -----------EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNI 267 (285)
T ss_pred -----------ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCC
Confidence 0112357888999999999999999997 9999999999864
No 54
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.8e-48 Score=373.73 Aligned_cols=284 Identities=34% Similarity=0.569 Sum_probs=228.8
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecC----Cce
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRM----SCS 191 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~----~~~ 191 (406)
++|++++.||+|+||.||+|.+..+++.||||++............+.+|+.+++.++||||+++++++.... ...
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07878 15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNE 94 (343)
T ss_pred hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCc
Confidence 6899999999999999999999999999999998754433344456778999999999999999999875421 235
Q ss_pred EEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC
Q 015455 192 LYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 192 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~ 271 (406)
.|++++++++++...... ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus 95 ~~~~~~~~~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~- 171 (343)
T cd07878 95 VYLVTNLMGADLNNIVKC--QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDE- 171 (343)
T ss_pred EEEEeecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCC-
Confidence 799999998877765543 46999999999999999999999999999999999999999999999999999876432
Q ss_pred CCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCc
Q 015455 272 KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351 (406)
Q Consensus 272 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 351 (406)
.....||+.|+|||++.+...++.++|||||||++|+|++|+.||.+.+..+.+..+.+..+.+..+.+........
T Consensus 172 ---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (343)
T cd07878 172 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHA 248 (343)
T ss_pred ---cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhH
Confidence 34567899999999987755689999999999999999999999999998888899988888777655433211110
Q ss_pred ccCC--CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 352 TLFK--PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 352 ~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
.... ........+.......++.+.+||.+||..||.+|||+.++|+||||.++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~ 304 (343)
T cd07878 249 RKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQY 304 (343)
T ss_pred HHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhcc
Confidence 0000 00000111223334567789999999999999999999999999999864
No 55
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-50 Score=373.97 Aligned_cols=256 Identities=27% Similarity=0.429 Sum_probs=222.0
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
..|..++.||+|+||.||+|.+..+++.||+|++..+... ...+.+.+|+.+|.+++++||.++|+.+.. +..++++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~-deIediqqei~~Ls~~~~~~it~yygsyl~--g~~Lwii 89 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAE-DEIEDIQQEISVLSQCDSPNITEYYGSYLK--GTKLWII 89 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcc-hhhHHHHHHHHHHHhcCcchHHhhhhheee--cccHHHH
Confidence 4688889999999999999999999999999999887644 446778899999999999999999999887 4559999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
||||.|+....+...+..+.+..+..++++++.||.|||..+.+|||||+.|||+..+|.+||+|||.+..+.......
T Consensus 90 Mey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr- 168 (467)
T KOG0201|consen 90 MEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR- 168 (467)
T ss_pred HHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhcc-
Confidence 9999998877777777778999999999999999999999999999999999999999999999999999887555443
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCC
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFK 355 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 355 (406)
..++|||.|||||++.+. .|+.++||||||++++||++|.+|+....+...+..|-+. ++
T Consensus 169 ~tfvGTPfwMAPEVI~~~-~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~---~P---------------- 228 (467)
T KOG0201|consen 169 KTFVGTPFWMAPEVIKQS-GYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKS---AP---------------- 228 (467)
T ss_pred ccccccccccchhhhccc-cccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCC---CC----------------
Confidence 778999999999999864 4999999999999999999999999988773333332210 00
Q ss_pred CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 356 PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
+.....+++.+++||..||++||+.||||.++|.|+|++.
T Consensus 229 ---------P~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 229 ---------PRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred ---------CccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence 0111267889999999999999999999999999999974
No 56
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.4e-48 Score=375.00 Aligned_cols=254 Identities=25% Similarity=0.317 Sum_probs=214.7
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCC-cEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTG-KIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~-~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~ 192 (406)
.++|++.+.||+|+||.||+|++..++ ..||+|.+..... .......+.+|+.++..++||||+++++++... ..+
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~--~~~ 106 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE--SYL 106 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC--CEE
Confidence 368999999999999999999866554 6899999875432 234456678899999999999999999999874 569
Q ss_pred EEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC
Q 015455 193 YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK 272 (406)
Q Consensus 193 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~ 272 (406)
|++|||+.++.+..+......+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus 107 ~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~-- 184 (340)
T PTZ00426 107 YLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR-- 184 (340)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC--
Confidence 999999987665555555568999999999999999999999999999999999999999999999999999876432
Q ss_pred CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 273 HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 273 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
.....||+.|+|||++.+.. ++.++|||||||++|||++|.+||.+.+.......+......
T Consensus 185 --~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~--------------- 246 (340)
T PTZ00426 185 --TYTLCGTPEYIAPEILLNVG-HGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIY--------------- 246 (340)
T ss_pred --cceecCChhhcCHHHHhCCC-CCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCC---------------
Confidence 23467899999999987654 889999999999999999999999988877766666542111
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCc-----CHHHHhcCccccc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERL-----TATVALNSEVSYQ 404 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----ta~elL~h~~f~~ 404 (406)
....+++.+.++|++||+.||.+|+ |++++++||||..
T Consensus 247 --------------~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~ 289 (340)
T PTZ00426 247 --------------FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGN 289 (340)
T ss_pred --------------CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 1125677899999999999999995 8999999999985
No 57
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=9.6e-48 Score=364.55 Aligned_cols=288 Identities=48% Similarity=0.788 Sum_probs=235.9
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
.++|++.+.||+|+||.||+|.+..+|+.||+|.++.............+|+.++++++|+|++++++++.......+++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 37899999999999999999999999999999999765433332334567999999999999999999988765567899
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
||||+++++...+......+++..++.++.||+.||.|||+.|++||||||+||+++.++.+||+|||++........ .
T Consensus 86 v~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~-~ 164 (309)
T cd07845 86 VMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAK-P 164 (309)
T ss_pred EEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccC-C
Confidence 999999988887766557899999999999999999999999999999999999999999999999999987654321 2
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCC-CCccc
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL-PNATL 353 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~ 353 (406)
.....+++.|+|||.+.+...++.++|||||||++|+|++|++||.+.+..+.+..+....+.+....|..... +....
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (309)
T cd07845 165 MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGK 244 (309)
T ss_pred CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccccccc
Confidence 23345688899999987656688999999999999999999999999999999999999888887766543221 11111
Q ss_pred CC-CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 354 FK-PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 354 ~~-~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.. +..++ ..+.......++.+.+||.+||+.||++|||+.++|+||||++
T Consensus 245 ~~~~~~~~-~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~ 295 (309)
T cd07845 245 FTLPKQPY-NNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKE 295 (309)
T ss_pred ccccCCCC-CchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 11 11111 1223334457889999999999999999999999999999985
No 58
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.4e-47 Score=364.73 Aligned_cols=278 Identities=36% Similarity=0.634 Sum_probs=215.8
Q ss_pred eeeeccCCceEEEEEEEc--cCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEec
Q 015455 121 IDKIGQGTYSNVYKAKDM--LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHY 198 (406)
Q Consensus 121 ~~~lg~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~ 198 (406)
..+||+|+||+||+|++. .+++.||+|.+...... ..+.+|+.++++++||||+++++++.......+|++|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGIS----MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 81 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCc----HHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence 358999999999999865 46789999998654322 335679999999999999999999877666779999999
Q ss_pred ccccHHHHhcC--------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEE----cCCCcEEEeeeccccc
Q 015455 199 MEHDLAGLAAS--------PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLI----DDDGVLKIADFGLASF 266 (406)
Q Consensus 199 ~~~~l~~~~~~--------~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~~~~kl~DFgla~~ 266 (406)
+++++...+.. ....+++..++.++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||++..
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07868 82 AEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred cCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence 99988775532 12358999999999999999999999999999999999999 4567899999999987
Q ss_pred cCCCCCC--CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCCh---------HHHHHHHHHHh
Q 015455 267 FDPNHKH--PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTE---------VEQLHKIYKLC 335 (406)
Q Consensus 267 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~---------~~~~~~i~~~~ 335 (406)
....... ......||+.|+|||++.+...++.++||||+||++|+|++|++||.+... ..++..+....
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07868 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 241 (317)
T ss_pred cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhc
Confidence 6533221 233467899999999998766689999999999999999999999976543 46678888888
Q ss_pred CCCCHHHhhhcC-CCCcccC--------CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 336 GSPSEEYWKKSK-LPNATLF--------KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 336 ~~~~~~~~~~~~-~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
+.+....|.... .+..... .........+.......++.+.+||.+||+.||.+|||++|+|+||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 242 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred CCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 888776655432 1111000 000001111112222345678999999999999999999999999998
No 59
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-49 Score=372.84 Aligned_cols=247 Identities=26% Similarity=0.431 Sum_probs=211.8
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
+.+.+++.||+|.||.|++|.. .....||+|.++..... .+.+.+|+++|++|+|+|||+++++|..+. .+|||
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~-~~~~~vavk~ik~~~m~---~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~--piyIV 279 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKW-NGSTKVAVKTIKEGSMS---PEAFLREAQIMKKLRHEKLVKLYGVCTKQE--PIYIV 279 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEE-cCCCcccceEEeccccC---hhHHHHHHHHHHhCcccCeEEEEEEEecCC--ceEEE
Confidence 5688899999999999999985 23348999999865443 245678999999999999999999999854 59999
Q ss_pred Eecccc-cHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 196 FHYMEH-DLAGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 196 ~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
||||.. +|++++.. .+..+...+...++.||++||+||+++++|||||.+.||||+++..+||+|||||+....+...
T Consensus 280 tE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~ 359 (468)
T KOG0197|consen 280 TEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT 359 (468)
T ss_pred EEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCcee
Confidence 999986 57777765 5678999999999999999999999999999999999999999999999999999966554443
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
......-...|.|||.+.-.. ++.+||||||||+||||+| |+.|+++.++.+.++.+.+...-|..
T Consensus 360 ~~~~~kfPIkWtAPEa~~~~~-FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P------------ 426 (468)
T KOG0197|consen 360 ASEGGKFPIKWTAPEALNYGK-FSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRP------------ 426 (468)
T ss_pred ecCCCCCCceecCHHHHhhCC-cccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCC------------
Confidence 333334477899999987655 9999999999999999998 99999999999999999876544432
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHh
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL 397 (406)
..+|+.+.++|..|++.+|++|||.+.+.
T Consensus 427 ----------------~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 427 ----------------EGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred ----------------CCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 37899999999999999999999998664
No 60
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=4e-48 Score=375.47 Aligned_cols=261 Identities=25% Similarity=0.348 Sum_probs=213.0
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
++|++++.||+|+||+||+|++..+++.||+|+++.... .......+.+|+.++..++|+||+++++.+.+ ...+|+
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~--~~~~~l 78 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQD--KLNLYL 78 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEec--CCeEEE
Confidence 479999999999999999999999999999999975432 23445667889999999999999999998887 456999
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC--
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK-- 272 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~-- 272 (406)
||||++++.+..+......+++..++.++.|++.||+|||++||+||||||+|||++.++++||+|||+++.+.....
T Consensus 79 v~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 79 IMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred EEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 999999866655555556899999999999999999999999999999999999999999999999999976532110
Q ss_pred --------------------------------CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCC
Q 015455 273 --------------------------------HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMP 320 (406)
Q Consensus 273 --------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~ 320 (406)
......+||+.|+|||++.+.. ++.++|||||||++|||++|+.||.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~-~~~~~DvwSlGvil~ell~G~~Pf~ 237 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTG-YNKLCDWWSLGVIMYEMLIGYPPFC 237 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCC-CCCchhhhhhHHHHHHHHhCCCCCC
Confidence 0012457999999999987754 8999999999999999999999999
Q ss_pred CCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCC---CCcCHHHHh
Q 015455 321 GRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPA---ERLTATVAL 397 (406)
Q Consensus 321 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~---~Rpta~elL 397 (406)
+.+..+...++....... .+|. ...+++++.+||.+|+. +|. .||+++|++
T Consensus 238 ~~~~~~~~~~i~~~~~~~--------~~p~-----------------~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~ 291 (363)
T cd05628 238 SETPQETYKKVMNWKETL--------IFPP-----------------EVPISEKAKDLILRFCC-EWEHRIGAPGVEEIK 291 (363)
T ss_pred CCCHHHHHHHHHcCcCcc--------cCCC-----------------cCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHh
Confidence 988877777775421111 0000 01467889999999776 444 468999999
Q ss_pred cCcccccc
Q 015455 398 NSEVSYQF 405 (406)
Q Consensus 398 ~h~~f~~~ 405 (406)
+||||+.+
T Consensus 292 ~hp~f~~~ 299 (363)
T cd05628 292 TNPFFEGV 299 (363)
T ss_pred CCCCCCCC
Confidence 99999753
No 61
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=3e-48 Score=372.03 Aligned_cols=262 Identities=27% Similarity=0.385 Sum_probs=218.2
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
++|++.+.||+|+||.||+|++..+++.||+|++..... .......+.+|+.++..++||||+++++++.. ....|+
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~--~~~~~l 78 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQD--DEYLYL 78 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEc--CCEEEE
Confidence 369999999999999999999989999999999976532 22345567889999999999999999998877 456999
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
||||++++.+..+......+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++..... .
T Consensus 79 v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~----~ 154 (333)
T cd05600 79 AMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT----Y 154 (333)
T ss_pred EEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc----c
Confidence 999998866665555566899999999999999999999999999999999999999999999999999986543 2
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
.....||+.|+|||++.+. .++.++|||||||++|||++|..||.+.+..+....+......... +.
T Consensus 155 ~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~--------~~---- 221 (333)
T cd05600 155 ANSVVGSPDYMAPEVLRGK-GYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQR--------PV---- 221 (333)
T ss_pred cCCcccCccccChhHhcCC-CCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccC--------CC----
Confidence 3456789999999998875 4899999999999999999999999998877776666542111100 00
Q ss_pred CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
.......+++++.+||.+||..+|.+|||+.++++||||..+
T Consensus 222 ---------~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 222 ---------YDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred ---------CCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence 000002568889999999999999999999999999999863
No 62
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=3.4e-48 Score=368.28 Aligned_cols=249 Identities=29% Similarity=0.406 Sum_probs=208.4
Q ss_pred eccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEeccccc
Q 015455 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD 202 (406)
Q Consensus 124 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~~ 202 (406)
||+|+||.||+|++..+++.||+|++..... .......+.+|+.++.+++||||+++++++.. ....|+||||++++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~g 78 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQS--PEKLYLVLAFINGG 78 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEec--CCeEEEEEcCCCCC
Confidence 7999999999999999999999999875432 33445667789999999999999999998876 45699999999986
Q ss_pred HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCccccC
Q 015455 203 LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTL 282 (406)
Q Consensus 203 l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~gt~ 282 (406)
.+.........+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++...... .......||+
T Consensus 79 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~ 157 (312)
T cd05585 79 ELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTNTFCGTP 157 (312)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC-CccccccCCc
Confidence 665555556689999999999999999999999999999999999999999999999999998643222 2234567899
Q ss_pred cccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhh
Q 015455 283 WYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKR 362 (406)
Q Consensus 283 ~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (406)
.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+..+....+.....
T Consensus 158 ~y~aPE~~~~~~-~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~-------------------------- 210 (312)
T cd05585 158 EYLAPELLLGHG-YTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPL-------------------------- 210 (312)
T ss_pred ccCCHHHHcCCC-CCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC--------------------------
Confidence 999999987754 89999999999999999999999998877766665543110
Q ss_pred hhhhhcCCCCCChHHHHHHcccCCCCCCc---CHHHHhcCcccccc
Q 015455 363 CIQETFKDFPPSSLPLIETLLAIDPAERL---TATVALNSEVSYQF 405 (406)
Q Consensus 363 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---ta~elL~h~~f~~~ 405 (406)
.....+++.+.+||.+||+.||.+|| ++.++|.||||.+.
T Consensus 211 ---~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 211 ---RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred ---CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence 01125788899999999999999997 58999999999863
No 63
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3.8e-48 Score=375.80 Aligned_cols=260 Identities=30% Similarity=0.444 Sum_probs=214.2
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
++|++++.||+|+||+||+|++..+|+.||||++..... .......+.+|+.++..++||||+++++++.+ ...+|+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~--~~~~~l 78 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQD--ENYLYL 78 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc--CCeEEE
Confidence 469999999999999999999999999999999976432 23445567789999999999999999999887 456999
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC-
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH- 273 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~- 273 (406)
||||+.++.+.........+++..++.++.||+.||+|||+.||+||||||+|||++.++.++|+|||++..+......
T Consensus 79 v~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 79 IMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred EECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 9999988766655555568999999999999999999999999999999999999999999999999999765322110
Q ss_pred ------------------------------------CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCC
Q 015455 274 ------------------------------------PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKP 317 (406)
Q Consensus 274 ------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~ 317 (406)
.....+||+.|+|||++.+.. ++.++|||||||++|||++|.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~el~~G~~ 237 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTG-YNKECDWWSLGVIMYEMLVGYP 237 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCC-CCCeeeeecchhHHHHhhcCCC
Confidence 011346899999999887654 8999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcC---HH
Q 015455 318 IMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT---AT 394 (406)
Q Consensus 318 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---a~ 394 (406)
||.+.+..+....+....... .++. ...+++++.+||.+||. ||.+|++ +.
T Consensus 238 Pf~~~~~~~~~~~i~~~~~~~--------~~~~-----------------~~~~s~~~~~li~~ll~-~p~~R~~~~~~~ 291 (364)
T cd05599 238 PFCSDNPQETYRKIINWKETL--------QFPD-----------------EVPLSPEAKDLIKRLCC-EAERRLGNNGVN 291 (364)
T ss_pred CCCCCCHHHHHHHHHcCCCcc--------CCCC-----------------CCCCCHHHHHHHHHHcc-CHhhcCCCCCHH
Confidence 999888777666664321100 0000 01467889999999997 9999998 99
Q ss_pred HHhcCccccc
Q 015455 395 VALNSEVSYQ 404 (406)
Q Consensus 395 elL~h~~f~~ 404 (406)
++|+||||+.
T Consensus 292 ~ll~h~~~~~ 301 (364)
T cd05599 292 EIKSHPFFKG 301 (364)
T ss_pred HHhcCCCcCC
Confidence 9999999975
No 64
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=7.6e-48 Score=375.83 Aligned_cols=261 Identities=30% Similarity=0.378 Sum_probs=211.1
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
.|++++.||+|+||+||+|++..+++.||+|++..... .......+.+|+.+++.++||||+++++++.+ ...+|+|
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~--~~~~~lv 79 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQD--KDNLYFV 79 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec--CCEEEEE
Confidence 58999999999999999999999999999999976543 34455678899999999999999999999887 4569999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC---
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--- 272 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~--- 272 (406)
|||++++.+..+......+++..++.++.||+.||.|||+.||+||||||+|||++.++++||+|||++..+.....
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~ 159 (381)
T cd05626 80 MDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKY 159 (381)
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccc
Confidence 99998865554554556799999999999999999999999999999999999999999999999999864321000
Q ss_pred -------------------------------------------CCCcCccccCcccccccccCCccCCCccchHHHHHHH
Q 015455 273 -------------------------------------------HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCIL 309 (406)
Q Consensus 273 -------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l 309 (406)
......+||+.|+|||++.+.. ++.++|||||||++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~~DiwSlG~il 238 (381)
T cd05626 160 YQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKG-YTQLCDWWSVGVIL 238 (381)
T ss_pred ccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCC-CCCccceeehhhHH
Confidence 0012457999999999987654 89999999999999
Q ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcc--cCCC
Q 015455 310 AELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLL--AIDP 387 (406)
Q Consensus 310 ~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L--~~dP 387 (406)
|||++|..||...+..+....+....... ..+ ....+++++.+||.+|| ..+|
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~--------~~~-----------------~~~~~s~~~~dli~~ll~~~~~~ 293 (381)
T cd05626 239 FEMLVGQPPFLAPTPTETQLKVINWENTL--------HIP-----------------PQVKLSPEAVDLITKLCCSAEER 293 (381)
T ss_pred HHHHhCCCCCcCCCHHHHHHHHHcccccc--------CCC-----------------CCCCCCHHHHHHHHHHccCcccc
Confidence 99999999999887766655554321110 000 01257889999999965 4455
Q ss_pred CCCcCHHHHhcCcccccc
Q 015455 388 AERLTATVALNSEVSYQF 405 (406)
Q Consensus 388 ~~Rpta~elL~h~~f~~~ 405 (406)
..|+|+.++++||||.++
T Consensus 294 ~~R~~~~~~l~hp~f~~~ 311 (381)
T cd05626 294 LGRNGADDIKAHPFFSEV 311 (381)
T ss_pred cCCCCHHHHhcCcccCCC
Confidence 569999999999999753
No 65
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=8.5e-49 Score=347.74 Aligned_cols=288 Identities=39% Similarity=0.621 Sum_probs=233.0
Q ss_pred CCcceeeeeccCCceEEEEEEEccCC----cEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCce
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTG----KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS 191 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~ 191 (406)
..|+.+..||+|.||.||+|....++ +.||||+++.+.-.........+|+..++.++|||++.+..+|... ...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~-d~~ 102 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH-DKK 102 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc-Cce
Confidence 57999999999999999999644433 2789999976532222223455799999999999999999988764 556
Q ss_pred EEEEEecccccHHHHhc----CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCC----CcEEEeeecc
Q 015455 192 LYLVFHYMEHDLAGLAA----SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDD----GVLKIADFGL 263 (406)
Q Consensus 192 ~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~----~~~kl~DFgl 263 (406)
+++++||.+.+|+..+. .....++...++.++.||+.|+.|||++=|+||||||.||||..+ |.|||+|||+
T Consensus 103 v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGl 182 (438)
T KOG0666|consen 103 VWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGL 182 (438)
T ss_pred EEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccH
Confidence 99999999999998653 233579999999999999999999999999999999999999877 8999999999
Q ss_pred ccccCCCCCC--CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCC---------hHHHHHHHH
Q 015455 264 ASFFDPNHKH--PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRT---------EVEQLHKIY 332 (406)
Q Consensus 264 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~---------~~~~~~~i~ 332 (406)
++.+...-.. .....+.|.+|+|||.+.|...|+.+.|||++|||+.||++-.+.|.+.. ..+++.+|+
T Consensus 183 aR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf 262 (438)
T KOG0666|consen 183 ARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIF 262 (438)
T ss_pred HHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHH
Confidence 9988643222 13446779999999999999999999999999999999999999998754 357899999
Q ss_pred HHhCCCCHHHhhhc-CCCCcccC-------CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 333 KLCGSPSEEYWKKS-KLPNATLF-------KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 333 ~~~~~~~~~~~~~~-~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
+.+|.|....|... +.|+.... ...+..-....+..+.-++...+|+.+||.+||.+|+|++++|+|+||.+
T Consensus 263 ~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~ 342 (438)
T KOG0666|consen 263 EVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTE 342 (438)
T ss_pred HHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccccccc
Confidence 99999999888764 34443110 00111122233444556777999999999999999999999999999974
No 66
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=6.2e-48 Score=368.22 Aligned_cols=250 Identities=27% Similarity=0.394 Sum_probs=209.7
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEeccc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYME 200 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~ 200 (406)
+.||+|+||.||++++..+|+.||+|++..... .......+.+|+.+++.++||||+++++++... ..+|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~--~~~~lv~E~~~ 78 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH--DRLCFVMEYAN 78 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecC--CEEEEEEeCCC
Confidence 369999999999999999999999999976432 234455677899999999999999999988774 46999999999
Q ss_pred ccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCccc
Q 015455 201 HDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280 (406)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~g 280 (406)
++.+.........+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... .......|
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~g 157 (323)
T cd05595 79 GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-ATMKTFCG 157 (323)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCC-CccccccC
Confidence 87666555556689999999999999999999999999999999999999999999999999987542221 12234578
Q ss_pred cCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCch
Q 015455 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPY 360 (406)
Q Consensus 281 t~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (406)
|+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+.......+..... .
T Consensus 158 t~~y~aPE~~~~~~-~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~----------~------------- 213 (323)
T cd05595 158 TPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI----------R------------- 213 (323)
T ss_pred CcCcCCcccccCCC-CCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC----------C-------------
Confidence 99999999987654 89999999999999999999999998877666655543110 0
Q ss_pred hhhhhhhcCCCCCChHHHHHHcccCCCCCCc-----CHHHHhcCccccc
Q 015455 361 KRCIQETFKDFPPSSLPLIETLLAIDPAERL-----TATVALNSEVSYQ 404 (406)
Q Consensus 361 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----ta~elL~h~~f~~ 404 (406)
....+++++.+||.+||++||.+|+ ++.++++|+||..
T Consensus 214 ------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~ 256 (323)
T cd05595 214 ------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 256 (323)
T ss_pred ------CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCC
Confidence 1135788899999999999999998 8999999999975
No 67
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.3e-49 Score=358.20 Aligned_cols=254 Identities=27% Similarity=0.454 Sum_probs=229.0
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
.+|++.+.||+|.||+|-+|.....|+.||||.|+++.+ +......+.+|++||..|+||||++++++|+.. ..+.+
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENk--dKIvi 130 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENK--DKIVI 130 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCC--ceEEE
Confidence 579999999999999999999889999999999998876 455677899999999999999999999999984 45999
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
||||..++.+..+....+.+++.+++.+++||+.|+.|+|+++++|||||.+|||+|.++++||+||||+-.+... ..
T Consensus 131 vMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~--kf 208 (668)
T KOG0611|consen 131 VMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK--KF 208 (668)
T ss_pred EEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccc--cH
Confidence 9999998877777777789999999999999999999999999999999999999999999999999999988544 34
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
..++||+|-|.+||++.|...-++.+|-|||||+||.|+.|..||.|.+.......|.......
T Consensus 209 LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrE---------------- 272 (668)
T KOG0611|consen 209 LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYRE---------------- 272 (668)
T ss_pred HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccC----------------
Confidence 6789999999999999998867899999999999999999999999999988888886542221
Q ss_pred CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccc
Q 015455 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSY 403 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~ 403 (406)
+.-|.++.-||+.||..+|.+|.|++++-+|=|.+
T Consensus 273 --------------P~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 273 --------------PETPSDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred --------------CCCCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 24577889999999999999999999999998875
No 68
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-49 Score=351.25 Aligned_cols=260 Identities=26% Similarity=0.406 Sum_probs=230.2
Q ss_pred cccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCce
Q 015455 113 RRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS 191 (406)
Q Consensus 113 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~ 191 (406)
..+++|..++.||+|.||+|-+++.+.+|+.||||++++... ..+.....+.|-.+|+..+||.+..+...|+. ...
T Consensus 165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt--~dr 242 (516)
T KOG0690|consen 165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQT--QDR 242 (516)
T ss_pred eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhcc--Cce
Confidence 357899999999999999999999999999999999988754 56667788889999999999999998777766 456
Q ss_pred EEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC
Q 015455 192 LYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 192 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~ 271 (406)
+++||||.+|+.+..+.++...|+++.++.+..+|+.||.|||+++||+||||.+|.|+|.+|++||+||||++.--. .
T Consensus 243 lCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~-~ 321 (516)
T KOG0690|consen 243 LCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK-Y 321 (516)
T ss_pred EEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhccc-c
Confidence 999999999999998888888999999999999999999999999999999999999999999999999999986322 2
Q ss_pred CCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCc
Q 015455 272 KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351 (406)
Q Consensus 272 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 351 (406)
...+..+||||.|+|||++... .|+.++|||.+||++|||+||+.||...+....+..|.-. +.++|
T Consensus 322 g~t~kTFCGTPEYLAPEVleDn-DYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e----------d~kFP-- 388 (516)
T KOG0690|consen 322 GDTTKTFCGTPEYLAPEVLEDN-DYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME----------DLKFP-- 388 (516)
T ss_pred cceeccccCChhhcCchhhccc-cccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh----------hccCC--
Confidence 2235678999999999999875 4999999999999999999999999999998888888653 22222
Q ss_pred ccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCc-----CHHHHhcCcccccc
Q 015455 352 TLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERL-----TATVALNSEVSYQF 405 (406)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----ta~elL~h~~f~~~ 405 (406)
..++++++.|+..+|.+||.+|. .|.|+.+|+||..+
T Consensus 389 -----------------r~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v 430 (516)
T KOG0690|consen 389 -----------------RTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASV 430 (516)
T ss_pred -----------------ccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccC
Confidence 37899999999999999999997 49999999999864
No 69
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-48 Score=369.82 Aligned_cols=260 Identities=26% Similarity=0.442 Sum_probs=232.6
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
+++|..++.+|+|+||.+++++++.+++.|++|.+..........+....|+.++++++|||||.+.+.|... +++++|
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~-~~~l~I 81 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEED-GQLLCI 81 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcC-CceEEE
Confidence 4789999999999999999999999999999999998877666666788899999999999999999999874 567999
Q ss_pred EEecccccHHHH-hc-CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC
Q 015455 195 VFHYMEHDLAGL-AA-SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK 272 (406)
Q Consensus 195 v~e~~~~~l~~~-~~-~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~ 272 (406)
||+||+|+.+.. +. +++..|+++.+..|+.||+.|+.|||+++|+|||||+.|||++.++.|||+|||+|+.+.+..
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~- 160 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED- 160 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch-
Confidence 999999876553 33 334789999999999999999999999999999999999999999999999999999987654
Q ss_pred CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 273 HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 273 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
....+.+||+.|++||++.+.. |+.++|||||||++|||++-+++|.+.+......+|.+....|..
T Consensus 161 ~~a~tvvGTp~YmcPEil~d~p-Yn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp------------ 227 (426)
T KOG0589|consen 161 SLASTVVGTPYYMCPEILSDIP-YNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLP------------ 227 (426)
T ss_pred hhhheecCCCcccCHHHhCCCC-CCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCC------------
Confidence 2467789999999999888754 999999999999999999999999999999999999887644432
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
...+.++..+|..||..+|..||++.++|.+|.+..+
T Consensus 228 ----------------~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~~ 264 (426)
T KOG0589|consen 228 ----------------SMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLRY 264 (426)
T ss_pred ----------------ccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhhH
Confidence 3678899999999999999999999999999987643
No 70
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=7.5e-48 Score=368.37 Aligned_cols=250 Identities=25% Similarity=0.378 Sum_probs=208.7
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEeccc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYME 200 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~ 200 (406)
+.||+|+||.||++++..+|+.||+|++..... .......+.+|+.+++.++||||+++++++... ..+|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~~~lv~Ey~~ 78 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTK--DRLCFVMEYVN 78 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC--CEEEEEEeCCC
Confidence 368999999999999999999999999976432 234456778899999999999999999888764 56999999999
Q ss_pred ccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCccc
Q 015455 201 HDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280 (406)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~g 280 (406)
++.+.........+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... ......+|
T Consensus 79 ~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~~~~~g 157 (328)
T cd05593 79 GGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA-ATMKTFCG 157 (328)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcc-cccccccC
Confidence 87666555556689999999999999999999999999999999999999999999999999987543221 12344678
Q ss_pred cCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCch
Q 015455 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPY 360 (406)
Q Consensus 281 t~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (406)
|+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+..+....+.... ..
T Consensus 158 t~~y~aPE~~~~~~-~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~----------~~------------- 213 (328)
T cd05593 158 TPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED----------IK------------- 213 (328)
T ss_pred CcCccChhhhcCCC-CCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCC----------cc-------------
Confidence 99999999987654 8999999999999999999999998877666555443210 01
Q ss_pred hhhhhhhcCCCCCChHHHHHHcccCCCCCCc-----CHHHHhcCccccc
Q 015455 361 KRCIQETFKDFPPSSLPLIETLLAIDPAERL-----TATVALNSEVSYQ 404 (406)
Q Consensus 361 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----ta~elL~h~~f~~ 404 (406)
....+++++.+||.+||++||.+|+ ++.++++||||..
T Consensus 214 ------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~ 256 (328)
T cd05593 214 ------FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTG 256 (328)
T ss_pred ------CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 1135788899999999999999997 8999999999975
No 71
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=5.3e-48 Score=372.65 Aligned_cols=261 Identities=33% Similarity=0.476 Sum_probs=216.2
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
++|++.+.||+|+||.||+|++..+|+.||||++..... .......+.+|+.++..++||||+++++++.+ ...+|+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~l 78 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQD--EEHLYL 78 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheec--CCeEEE
Confidence 369999999999999999999999999999999976433 22445667889999999999999999998876 456999
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC---
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH--- 271 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~--- 271 (406)
||||+.++.+..+......+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||++.......
T Consensus 79 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 79 VMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred EEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 99999875544444444689999999999999999999999999999999999999999999999999998765433
Q ss_pred -------------------------CCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHH
Q 015455 272 -------------------------KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVE 326 (406)
Q Consensus 272 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~ 326 (406)
........||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~ 237 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGT-PYGLECDWWSLGVILYEMLYGFPPFYSDTLQE 237 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCC-CCCCceeeEecchhhhhhccCCCCCCCCCHHH
Confidence 1123345789999999998875 48999999999999999999999999988777
Q ss_pred HHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcC-HHHHhcCcccccc
Q 015455 327 QLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT-ATVALNSEVSYQF 405 (406)
Q Consensus 327 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-a~elL~h~~f~~~ 405 (406)
....+....... .++. ...+++++.+||..||. ||.+||+ +.++|+||||+.+
T Consensus 238 ~~~~i~~~~~~~--------~~p~-----------------~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 238 TYNKIINWKESL--------RFPP-----------------DPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred HHHHHhccCCcc--------cCCC-----------------CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 666665421110 0000 12368899999999998 9999999 9999999999853
No 72
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.4e-47 Score=364.38 Aligned_cols=255 Identities=26% Similarity=0.381 Sum_probs=212.0
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCC-CeeeEeeeeeecCCceEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHP-NVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~-~iv~l~~~~~~~~~~~~~l 194 (406)
+|++++.||+|+||.||+|++..+++.||+|++..... .....+.+..|+.++..++|+ +|+++++++... ..+|+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~--~~~~l 78 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM--DRLYF 78 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcC--CEEEE
Confidence 48899999999999999999999999999999976432 234456677899999999765 588888888763 46999
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
||||++++.+.........+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++....... ..
T Consensus 79 v~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~ 157 (324)
T cd05587 79 VMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG-KT 157 (324)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC-Cc
Confidence 99999986665555555679999999999999999999999999999999999999999999999999987532221 12
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
.....||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+..+.+..+......
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~----------------- 219 (324)
T cd05587 158 TRTFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVS----------------- 219 (324)
T ss_pred eeeecCCccccChhhhcCCC-CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-----------------
Confidence 33457899999999988754 899999999999999999999999998887777766542111
Q ss_pred CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCH-----HHHhcCccccc
Q 015455 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTA-----TVALNSEVSYQ 404 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta-----~elL~h~~f~~ 404 (406)
....+++++.++|.+||.+||.+|+++ .++++||||..
T Consensus 220 ------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~ 262 (324)
T cd05587 220 ------------YPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRR 262 (324)
T ss_pred ------------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 112577889999999999999999986 89999999975
No 73
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=9.9e-48 Score=374.61 Aligned_cols=260 Identities=27% Similarity=0.387 Sum_probs=210.8
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
++|++++.||+|+||.||+|++..+++.||||++..... .......+.+|+++++.++|||||++++++.+ ...+|+
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~--~~~~~l 78 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQD--AQYLYL 78 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEc--CCeeEE
Confidence 369999999999999999999999999999999875432 33445677889999999999999999999887 456999
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC-
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH- 273 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~- 273 (406)
||||++++.+..+......+++..++.++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++.+......
T Consensus 79 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 79 IMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 9999987655545445568999999999999999999999999999999999999999999999999999643211000
Q ss_pred ---------------------------------------------CCcCccccCcccccccccCCccCCCccchHHHHHH
Q 015455 274 ---------------------------------------------PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCI 308 (406)
Q Consensus 274 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~ 308 (406)
.....+||+.|+|||++.+.. ++.++|||||||+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvi 237 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQG-YGQECDWWSLGAI 237 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCC-CCCceeeEecchh
Confidence 001246899999999987654 8999999999999
Q ss_pred HHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCC
Q 015455 309 LAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPA 388 (406)
Q Consensus 309 l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 388 (406)
+|||++|.+||.+.+..+.+..+....... .++. ...+++++.+||.+||. +|.
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~--------~~p~-----------------~~~~s~~~~dli~~lL~-~~~ 291 (377)
T cd05629 238 MFECLIGWPPFCSENSHETYRKIINWRETL--------YFPD-----------------DIHLSVEAEDLIRRLIT-NAE 291 (377)
T ss_pred hhhhhcCCCCCCCCCHHHHHHHHHccCCcc--------CCCC-----------------CCCCCHHHHHHHHHHhc-CHh
Confidence 999999999999888777766665421100 0110 12467889999999998 777
Q ss_pred CC---cCHHHHhcCccccc
Q 015455 389 ER---LTATVALNSEVSYQ 404 (406)
Q Consensus 389 ~R---pta~elL~h~~f~~ 404 (406)
+| +|+.++++||||+.
T Consensus 292 ~r~~r~~~~~~l~hp~~~~ 310 (377)
T cd05629 292 NRLGRGGAHEIKSHPFFRG 310 (377)
T ss_pred hcCCCCCHHHHhcCCCcCC
Confidence 65 59999999999974
No 74
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.5e-47 Score=365.18 Aligned_cols=251 Identities=23% Similarity=0.366 Sum_probs=209.0
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCceEEEEEecc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLYLVFHYM 199 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~ 199 (406)
+.||+|+||.||+|++..+++.||+|++..... .......+..|..++..+ +||||+++++++... ..+|+||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~--~~~~iv~Ey~ 78 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTP--DRLFFVMEFV 78 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcC--CEEEEEEcCC
Confidence 369999999999999999999999999975432 223455667788888876 799999999998774 5699999999
Q ss_pred cccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCcc
Q 015455 200 EHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRV 279 (406)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~ 279 (406)
+++.+.........+++..++.++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++...... .......
T Consensus 79 ~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-~~~~~~~ 157 (320)
T cd05590 79 NGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-KTTSTFC 157 (320)
T ss_pred CCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-Ccccccc
Confidence 987666555555689999999999999999999999999999999999999999999999999987643222 1234467
Q ss_pred ccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCc
Q 015455 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREP 359 (406)
Q Consensus 280 gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (406)
||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+..+....+......
T Consensus 158 gt~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~---------------------- 214 (320)
T cd05590 158 GTPDYIAPEILQEML-YGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVV---------------------- 214 (320)
T ss_pred cCccccCHHHHcCCC-CCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCC----------------------
Confidence 899999999987644 899999999999999999999999998887777766442110
Q ss_pred hhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCH------HHHhcCcccccc
Q 015455 360 YKRCIQETFKDFPPSSLPLIETLLAIDPAERLTA------TVALNSEVSYQF 405 (406)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta------~elL~h~~f~~~ 405 (406)
....+++++.+||.+||+.||.+||++ +++++||||+.+
T Consensus 215 -------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 215 -------YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred -------CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence 012467889999999999999999998 999999999753
No 75
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3.1e-47 Score=381.02 Aligned_cols=280 Identities=23% Similarity=0.319 Sum_probs=217.2
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCC------CCeeeEeeeeeecC
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH------PNVIKLEGLVTSRM 188 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~l~~~~~~~~ 188 (406)
.++|++++.||+|+||+||+|.+..+++.||||+++... ........|+.++..++| .+++++++++...
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~- 203 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE- 203 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC-
Confidence 478999999999999999999998999999999986432 222334557777776654 5688898888764
Q ss_pred CceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCCeEEcCCC-------------
Q 015455 189 SCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN-NGVLHRDIKGSNLLIDDDG------------- 254 (406)
Q Consensus 189 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~------------- 254 (406)
...+|+||++++++++..+... ..+++..++.++.||+.||.|||+ .|||||||||+|||++.++
T Consensus 204 ~~~~~iv~~~~g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~ 282 (467)
T PTZ00284 204 TGHMCIVMPKYGPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPP 282 (467)
T ss_pred CceEEEEEeccCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCC
Confidence 4578999999988888866543 479999999999999999999998 5999999999999998765
Q ss_pred ---cEEEeeeccccccCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015455 255 ---VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331 (406)
Q Consensus 255 ---~~kl~DFgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i 331 (406)
.+||+|||++.... ......+||+.|+|||++.+.. |+.++|||||||++|||++|++||.+.+..+.+..+
T Consensus 283 ~~~~vkl~DfG~~~~~~----~~~~~~~gt~~Y~APE~~~~~~-~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i 357 (467)
T PTZ00284 283 DPCRVRICDLGGCCDER----HSRTAIVSTRHYRSPEVVLGLG-WMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLM 357 (467)
T ss_pred CCceEEECCCCccccCc----cccccccCCccccCcHHhhcCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 49999999886432 2234568999999999998754 999999999999999999999999999999999999
Q ss_pred HHHhCCCCHHHhhhcCCCCcc-------cCCCCCchhhhhhhhc-------CCCCCChHHHHHHcccCCCCCCcCHHHHh
Q 015455 332 YKLCGSPSEEYWKKSKLPNAT-------LFKPREPYKRCIQETF-------KDFPPSSLPLIETLLAIDPAERLTATVAL 397 (406)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-------~~~~~~~~~li~~~L~~dP~~Rpta~elL 397 (406)
.+.++.++..+.......... ...+... ...+.... ...++.+.|||.+||.+||.+|||++|+|
T Consensus 358 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L 436 (467)
T PTZ00284 358 EKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTD-PKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMT 436 (467)
T ss_pred HHHcCCCCHHHHhhccchhHHHHhhhcccccccCC-HHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHh
Confidence 999998876554321111000 0000000 00000000 01245678999999999999999999999
Q ss_pred cCcccccc
Q 015455 398 NSEVSYQF 405 (406)
Q Consensus 398 ~h~~f~~~ 405 (406)
+||||.++
T Consensus 437 ~Hp~~~~~ 444 (467)
T PTZ00284 437 THPYVLKY 444 (467)
T ss_pred cCcccccc
Confidence 99999875
No 76
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.6e-46 Score=351.58 Aligned_cols=285 Identities=42% Similarity=0.684 Sum_probs=234.6
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~ 196 (406)
+|++.+.||+|+||.||+|++..+|+.||+|++............+.+|+.++++++||||+++++++.. ....++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~~v~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH--GSGFVLVM 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec--CCeeEEEe
Confidence 4889999999999999999998899999999998765544555678889999999999999999999887 45689999
Q ss_pred ecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCc
Q 015455 197 HYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMT 276 (406)
Q Consensus 197 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~ 276 (406)
||+++++...+......+++..++.++.||+.||.|||+.|++|+||||+||+++.++.++|+|||++............
T Consensus 79 e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (286)
T cd07832 79 EYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYS 158 (286)
T ss_pred cccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccc
Confidence 99966777776655578999999999999999999999999999999999999999999999999999877544332234
Q ss_pred CccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCC-CcccCC
Q 015455 277 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLP-NATLFK 355 (406)
Q Consensus 277 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~ 355 (406)
...++..|+|||.+.+...++.++||||+||++|+|++|.+||.+.+....+..+....+.+....|...... ......
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07832 159 HQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKIT 238 (286)
T ss_pred cccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhccc
Confidence 4578999999999876665789999999999999999999999999888888888888888776655542211 100000
Q ss_pred CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccc
Q 015455 356 PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSY 403 (406)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~ 403 (406)
........+....+..+..+.+||++||+.||.+|||++++|+||||.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 239 FPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred CCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 000111113344457788999999999999999999999999999984
No 77
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.5e-47 Score=374.00 Aligned_cols=259 Identities=31% Similarity=0.413 Sum_probs=210.9
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
.|++++.||+|+||.||+|++..+++.||+|++..... .......+.+|+.+++.++|||||++++.+.+. ..+|+|
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~--~~~~lv 79 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDK--DNLYFV 79 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeC--CEEEEE
Confidence 58999999999999999999999999999999875432 234456788899999999999999999998874 569999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC----
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH---- 271 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~---- 271 (406)
|||++++.+..+......+++..++.++.||+.||+|||+.||+||||||+|||++.++++||+|||++..+....
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~ 159 (382)
T cd05625 80 MDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (382)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccc
Confidence 9999886555444445578999999999999999999999999999999999999999999999999975431100
Q ss_pred ------------------------------------------CCCCcCccccCcccccccccCCccCCCccchHHHHHHH
Q 015455 272 ------------------------------------------KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCIL 309 (406)
Q Consensus 272 ------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l 309 (406)
.......+||+.|+|||++.+.. ++.++|||||||++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~~DiwSlGvil 238 (382)
T cd05625 160 YQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVIL 238 (382)
T ss_pred cccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCC-CCCeeeEEechHHH
Confidence 00012347899999999987654 89999999999999
Q ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCC
Q 015455 310 AELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAE 389 (406)
Q Consensus 310 ~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 389 (406)
|||++|++||.+.+..+....+........ .| ....+++++.++|.+|+ .||.+
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~--------~p-----------------~~~~~s~~~~~li~~l~-~~p~~ 292 (382)
T cd05625 239 YEMLVGQPPFLAQTPLETQMKVINWQTSLH--------IP-----------------PQAKLSPEASDLIIKLC-RGPED 292 (382)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHccCCCcC--------CC-----------------CcccCCHHHHHHHHHHc-cCHhH
Confidence 999999999998887766655543211110 00 01257889999999986 59999
Q ss_pred CcC---HHHHhcCccccc
Q 015455 390 RLT---ATVALNSEVSYQ 404 (406)
Q Consensus 390 Rpt---a~elL~h~~f~~ 404 (406)
|++ +.++++||||+.
T Consensus 293 R~~~~~~~ei~~hp~f~~ 310 (382)
T cd05625 293 RLGKNGADEIKAHPFFKT 310 (382)
T ss_pred cCCCCCHHHHhcCCCcCC
Confidence 997 999999999975
No 78
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.8e-47 Score=371.60 Aligned_cols=262 Identities=25% Similarity=0.331 Sum_probs=215.7
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~ 193 (406)
.++|++.+.||+|+||.||+|++..+++.||+|++..... .......+.+|+.+++.++||||+++++++.+ ...+|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~--~~~~~ 119 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQD--DKYLY 119 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEec--CCEEE
Confidence 4789999999999999999999999999999999975432 22334557789999999999999999988876 45699
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
+||||++++.+..+... ..+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||++.........
T Consensus 120 lv~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~ 198 (370)
T cd05596 120 MVMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMV 198 (370)
T ss_pred EEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcc
Confidence 99999987655444333 36899999999999999999999999999999999999999999999999999876543332
Q ss_pred CCcCccccCcccccccccCC---ccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 274 PMTSRVVTLWYRPPELLLGA---TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~---~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
.....+||+.|+|||++.+. ..++.++|||||||++|||++|++||.+.+....+..+....... .++
T Consensus 199 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~--------~~~- 269 (370)
T cd05596 199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSL--------TFP- 269 (370)
T ss_pred cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcC--------CCC-
Confidence 33456799999999988643 237889999999999999999999999988777776665421110 000
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCC--CcCHHHHhcCccccc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAE--RLTATVALNSEVSYQ 404 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpta~elL~h~~f~~ 404 (406)
....++.++.+||.+||+.+|.+ |+|++++++||||+.
T Consensus 270 ----------------~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~ 309 (370)
T cd05596 270 ----------------DDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKN 309 (370)
T ss_pred ----------------CcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCC
Confidence 01257889999999999999998 999999999999974
No 79
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=4.1e-47 Score=362.78 Aligned_cols=253 Identities=25% Similarity=0.368 Sum_probs=209.4
Q ss_pred cceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHH---hhCCCCCeeeEeeeeeecCCceEE
Q 015455 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILIL---RRLDHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 118 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l---~~l~h~~iv~l~~~~~~~~~~~~~ 193 (406)
|++++.||+|+||.||+|++..+|+.||||++..... .....+.+.+|+.++ +.++||||+++++++.. ....|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~--~~~~~ 78 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT--EDHVC 78 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc--CCEEE
Confidence 6789999999999999999999999999999975432 223345566666655 56689999999999887 45699
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
+||||++++.+...... ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++....... .
T Consensus 79 lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~-~ 156 (324)
T cd05589 79 FVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG-D 156 (324)
T ss_pred EEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC-C
Confidence 99999998766554433 479999999999999999999999999999999999999999999999999987543222 2
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
.....+|++.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+..+....+......
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~---------------- 219 (324)
T cd05589 157 RTSTFCGTPEFLAPEVLTETS-YTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVR---------------- 219 (324)
T ss_pred cccccccCccccCHhHhcCCC-CCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC----------------
Confidence 234567899999999987654 899999999999999999999999998887777666542111
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCc-----CHHHHhcCccccc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERL-----TATVALNSEVSYQ 404 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----ta~elL~h~~f~~ 404 (406)
....+++.+.+||.+||+.||.+|| ++.++++||||+.
T Consensus 220 -------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~ 262 (324)
T cd05589 220 -------------YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRD 262 (324)
T ss_pred -------------CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCC
Confidence 1125788899999999999999999 7999999999975
No 80
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.6e-47 Score=365.29 Aligned_cols=261 Identities=26% Similarity=0.394 Sum_probs=207.6
Q ss_pred CcceeeeeccCCceEEEEEEEc---cCCcEEEEEEEecCCC--ChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCc
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDM---LTGKIVALKKVRFDNL--EPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~ 190 (406)
+|++.+.||+|+||.||++++. .+++.||+|++..... .....+.+.+|+.++..+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~--~~ 78 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQT--EA 78 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEec--CC
Confidence 4889999999999999999863 4788999999875322 223345677899999999 59999999988876 45
Q ss_pred eEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 191 SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
.++++|||+.++.+.........+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.....
T Consensus 79 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 79 KLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCcccccc
Confidence 68999999998655544444557999999999999999999999999999999999999999999999999999876544
Q ss_pred CCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 271 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
.........||+.|+|||++.+...++.++|||||||++|||++|+.||...........+........
T Consensus 159 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~----------- 227 (332)
T cd05614 159 EKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCD----------- 227 (332)
T ss_pred CCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCC-----------
Confidence 333344567999999999987655588899999999999999999999975432211111111100000
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCc-----CHHHHhcCccccc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERL-----TATVALNSEVSYQ 404 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----ta~elL~h~~f~~ 404 (406)
......+++.+.+||.+||+.||++|| +++++++||||+.
T Consensus 228 --------------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 272 (332)
T cd05614 228 --------------PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKG 272 (332)
T ss_pred --------------CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 001125678899999999999999999 8999999999985
No 81
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.3e-46 Score=353.88 Aligned_cols=286 Identities=44% Similarity=0.766 Sum_probs=234.2
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.+.||.|+||.||+|.+..+++.+|+|.++...........+.+|+.++++++||||+++++++........|++
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 67999999999999999999998899999999997655443334456789999999999999999999887645779999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
|||+.+++...+......+++..++.++.||+.||+|||+.|++|+||||+|||++.++.++|+|||++........ ..
T Consensus 85 ~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-~~ 163 (293)
T cd07843 85 MEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK-PY 163 (293)
T ss_pred ehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCcc-cc
Confidence 99999888777766555799999999999999999999999999999999999999999999999999987654321 22
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhc-CCCCcccC
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS-KLPNATLF 354 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~ 354 (406)
....+++.|+|||.+.+...++.++|+||||+++|+|++|.+||...+..+.+.++....+.+....|... .++.....
T Consensus 164 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (293)
T cd07843 164 TQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKK 243 (293)
T ss_pred ccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhccc
Confidence 34567889999999876555788999999999999999999999999999999999988888877666543 22221111
Q ss_pred CCCCchhhhhhhhcCC--CCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 355 KPREPYKRCIQETFKD--FPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~--~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
.........+...++. +++.+.++|++||+.||++|||+.|+|.||||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 244 TFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred ccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 1111111122233333 48889999999999999999999999999998
No 82
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.1e-47 Score=374.22 Aligned_cols=259 Identities=29% Similarity=0.371 Sum_probs=210.0
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
+|++++.||+|+||.||+|++..+++.||+|++..... .......+.+|+.+|+.++||||+++++.+.+ ...+|+|
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~--~~~~~lv 79 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQD--KDNLYFV 79 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEc--CCEEEEE
Confidence 69999999999999999999999999999999865332 22334567789999999999999999998887 4569999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC----
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH---- 271 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~---- 271 (406)
|||++++.+..+......+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+|..+....
T Consensus 80 ~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~ 159 (376)
T cd05598 80 MDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (376)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccc
Confidence 9999886555555555679999999999999999999999999999999999999999999999999985432100
Q ss_pred --------------------------------------CCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHH
Q 015455 272 --------------------------------------KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELL 313 (406)
Q Consensus 272 --------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell 313 (406)
.......+||+.|+|||++.+.. ++.++|||||||++|||+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvilyell 238 (376)
T cd05598 160 YQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEML 238 (376)
T ss_pred cccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCC-CCcceeeeeccceeeehh
Confidence 00012357999999999987654 899999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCc--
Q 015455 314 AGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERL-- 391 (406)
Q Consensus 314 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-- 391 (406)
+|+.||.+.+..+....+....... .. .....+++.+.++|.+|+ .+|.+|+
T Consensus 239 ~G~~Pf~~~~~~~~~~~i~~~~~~~--------~~-----------------~~~~~~s~~~~~li~~l~-~~p~~R~~~ 292 (376)
T cd05598 239 VGQPPFLADTPAETQLKVINWETTL--------HI-----------------PSQAKLSREASDLILRLC-CGAEDRLGK 292 (376)
T ss_pred hCCCCCCCCCHHHHHHHHhccCccc--------cC-----------------CCCCCCCHHHHHHHHHHh-cCHhhcCCC
Confidence 9999999888766655543211000 00 001257788999999977 5999999
Q ss_pred -CHHHHhcCccccc
Q 015455 392 -TATVALNSEVSYQ 404 (406)
Q Consensus 392 -ta~elL~h~~f~~ 404 (406)
|+.++++||||+.
T Consensus 293 ~t~~ell~h~~~~~ 306 (376)
T cd05598 293 NGADEIKAHPFFKG 306 (376)
T ss_pred CCHHHHhCCCCcCC
Confidence 9999999999975
No 83
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=7.7e-48 Score=368.69 Aligned_cols=261 Identities=30% Similarity=0.411 Sum_probs=216.3
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
++|++.+.||+|+||+||+|++..+|+.||+|+++.... .......+.+|+.+++.++|+||+++++++.+ ....|+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~--~~~~~l 78 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQD--KDNLYL 78 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEec--CCeEEE
Confidence 369999999999999999999999999999999986533 33445667889999999999999999988876 456999
Q ss_pred EEeccccc-HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 195 VFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 195 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
||||++++ +..++......+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++..+......
T Consensus 79 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~ 158 (330)
T cd05601 79 VMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV 158 (330)
T ss_pred EECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCce
Confidence 99999775 44555554468999999999999999999999999999999999999999999999999999877544333
Q ss_pred CCcCccccCcccccccccC-----CccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCC
Q 015455 274 PMTSRVVTLWYRPPELLLG-----ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~-----~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 348 (406)
......||+.|+|||++.. ...++.++|||||||++|+|++|+.||...+....+.++....... .+
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~--------~~ 230 (330)
T cd05601 159 NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFL--------KF 230 (330)
T ss_pred eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCcc--------CC
Confidence 2334578999999999863 3347889999999999999999999999888777766665421100 00
Q ss_pred CCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 349 PNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
+ ..+.+++++.+||+.||. ||.+|||+.++++||||..
T Consensus 231 ~-----------------~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~ 268 (330)
T cd05601 231 P-----------------EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSK 268 (330)
T ss_pred C-----------------CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCC
Confidence 0 012577889999999998 9999999999999999975
No 84
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.4e-47 Score=366.04 Aligned_cols=251 Identities=26% Similarity=0.384 Sum_probs=208.9
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEeccc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYME 200 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~ 200 (406)
+.||+|+||.||++++..+|+.||+|++..... .......+.+|+.++..++||||+++++++... ..+|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~--~~~~lv~E~~~ 78 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH--DRLCFVMEYAN 78 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcC--CEEEEEEeCCC
Confidence 369999999999999999999999999976432 223445667899999999999999999988774 56999999999
Q ss_pred ccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCcc
Q 015455 201 HDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN-NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRV 279 (406)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~ 279 (406)
++.+.........+++..++.++.||+.||.|||+ .||+||||||+|||++.++.+||+|||+++...... .......
T Consensus 79 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~ 157 (325)
T cd05594 79 GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-ATMKTFC 157 (325)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-ccccccc
Confidence 87666665556689999999999999999999997 799999999999999999999999999987543222 1233457
Q ss_pred ccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCc
Q 015455 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREP 359 (406)
Q Consensus 280 gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (406)
||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+.......+..... .+
T Consensus 158 gt~~y~aPE~~~~~~-~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~----------~~----------- 215 (325)
T cd05594 158 GTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI----------RF----------- 215 (325)
T ss_pred CCcccCCHHHHccCC-CCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCC----------CC-----------
Confidence 899999999987654 89999999999999999999999998877666555432110 01
Q ss_pred hhhhhhhhcCCCCCChHHHHHHcccCCCCCCc-----CHHHHhcCcccccc
Q 015455 360 YKRCIQETFKDFPPSSLPLIETLLAIDPAERL-----TATVALNSEVSYQF 405 (406)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----ta~elL~h~~f~~~ 405 (406)
...+++++.+||.+||+.||++|+ ++.++|+||||...
T Consensus 216 --------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 216 --------PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred --------CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence 125788899999999999999997 99999999999853
No 85
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.3e-46 Score=360.45 Aligned_cols=282 Identities=24% Similarity=0.336 Sum_probs=214.1
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++++.||+|+||.||++++..+|..||+|.+.... .......+.+|+++++.++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv 81 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD--GEISIC 81 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC--CEEEEE
Confidence 78999999999999999999999999999999987643 344566788999999999999999999998874 469999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN-GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
|||++++.+..+......+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 158 (331)
T cd06649 82 MEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--- 158 (331)
T ss_pred eecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccc---
Confidence 99999866665555556799999999999999999999986 69999999999999999999999999997664322
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhh-hcCCC----
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK-KSKLP---- 349 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~---- 349 (406)
.....||+.|+|||++.+.. ++.++|||||||++|+|++|+.||...+..+....+............. ....+
T Consensus 159 ~~~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (331)
T cd06649 159 ANSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPG 237 (331)
T ss_pred cccCCCCcCcCCHhHhcCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccccccc
Confidence 24457899999999987754 8999999999999999999999998776654332221110000000000 00000
Q ss_pred -----CcccCCCCCchhhh----hhhh-----cCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 350 -----NATLFKPREPYKRC----IQET-----FKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 350 -----~~~~~~~~~~~~~~----~~~~-----~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
......+....... .... ...+++++++||.+||.+||++|||+.++|+||||+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~ 306 (331)
T cd06649 238 RPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKR 306 (331)
T ss_pred ccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhh
Confidence 00000000000000 0000 1135678999999999999999999999999999975
No 86
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=2.2e-46 Score=353.75 Aligned_cols=290 Identities=48% Similarity=0.853 Sum_probs=235.9
Q ss_pred cccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecC----
Q 015455 113 RRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRM---- 188 (406)
Q Consensus 113 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~---- 188 (406)
...++|++.+.||+|+||.||+|.+..+|+.||+|.++...........+.+|++++++++|||++++++++....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 3457899999999999999999999889999999999765433333456678999999999999999999886543
Q ss_pred ----CceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccc
Q 015455 189 ----SCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA 264 (406)
Q Consensus 189 ----~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla 264 (406)
...+++++||+++++...+......+++..++.++.||+.||+|||+.||+|+||||+||++++++.+||+|||++
T Consensus 84 ~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~ 163 (302)
T cd07864 84 FKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLA 163 (302)
T ss_pred ccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccccc
Confidence 2368999999999888877766668999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhh
Q 015455 265 SFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344 (406)
Q Consensus 265 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 344 (406)
...............++..|+|||.+.+...++.++|||||||++|+|++|++||...+..+.+..+.+..+.+....|.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (302)
T cd07864 164 RLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWP 243 (302)
T ss_pred ccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcc
Confidence 87754433333344568889999988765557889999999999999999999999988888888898888877665543
Q ss_pred hcC-CCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 345 KSK-LPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 345 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
... .+..............+......+|+.+.++|..||+.||.+|||+.+++.||||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 244 DVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred cccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 321 1111111111112223334445678999999999999999999999999999997
No 87
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1e-46 Score=352.80 Aligned_cols=282 Identities=40% Similarity=0.747 Sum_probs=227.3
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~ 196 (406)
+|++++.||.|++|.||+|++..+|+.||||.+............+.+|++++++++||||+++++++.+ ....+++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~ 78 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT--ENKLYLVF 78 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhccc--CCcEEEEe
Confidence 4889999999999999999998899999999987654444444567889999999999999999999876 44689999
Q ss_pred ecccccHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 197 HYMEHDLAGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 197 e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
||+.+++...+.. ....+++..++.++.|++.||+|||+.+++|+||+|+||+++.++.++|+|||++........ ..
T Consensus 79 e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~-~~ 157 (284)
T cd07860 79 EFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TY 157 (284)
T ss_pred eccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc-cc
Confidence 9998887776543 345789999999999999999999999999999999999999999999999999986643322 12
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcC-CCCcccC
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK-LPNATLF 354 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~ 354 (406)
....+++.|+|||++.+...++.++|||||||++|+|+||+.||.+.+.......+.+..+.+....|.... .+.....
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07860 158 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPS 237 (284)
T ss_pred ccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhh
Confidence 334568899999988765557889999999999999999999999998888888888888877665443211 1100000
Q ss_pred CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
.+ ...........+.+++.+.++|.+||+.||.+|||+.++|.||||
T Consensus 238 ~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 238 FP-KWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred cc-cccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 00 011112223345678889999999999999999999999999998
No 88
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.5e-46 Score=355.93 Aligned_cols=277 Identities=36% Similarity=0.612 Sum_probs=213.3
Q ss_pred eeeccCCceEEEEEEEcc--CCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEecc
Q 015455 122 DKIGQGTYSNVYKAKDML--TGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYM 199 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~ 199 (406)
.+||+|+||.||+|++.. ++..||+|.+..... ...+.+|+.+++.++||||+++++++.......++++|||+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYA 82 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeee
Confidence 579999999999998653 567899999865432 23466799999999999999999998766667799999999
Q ss_pred cccHHHHhcC--------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEE----cCCCcEEEeeecccccc
Q 015455 200 EHDLAGLAAS--------PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLI----DDDGVLKIADFGLASFF 267 (406)
Q Consensus 200 ~~~l~~~~~~--------~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~~~~kl~DFgla~~~ 267 (406)
++++...+.. ....+++..++.++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||+++..
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07867 83 EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred CCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceecc
Confidence 9988776531 22358999999999999999999999999999999999999 56679999999999876
Q ss_pred CCCCCC--CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCCh---------HHHHHHHHHHhC
Q 015455 268 DPNHKH--PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTE---------VEQLHKIYKLCG 336 (406)
Q Consensus 268 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~---------~~~~~~i~~~~~ 336 (406)
...... ......+|+.|+|||++.+...++.++|||||||++|||+||++||..... ...+..+...++
T Consensus 163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T cd07867 163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMG 242 (317)
T ss_pred CCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcC
Confidence 543221 223457899999999987765689999999999999999999999976442 355677778788
Q ss_pred CCCHHHhhhcCCC----Cccc-----CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 337 SPSEEYWKKSKLP----NATL-----FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 337 ~~~~~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
.+....|...... .... ..........+.......+..+.+||.+||..||.+|||+.|+|+||||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 243 FPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred CCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 7776665442211 0000 0000111111122222345678999999999999999999999999998
No 89
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3.8e-46 Score=348.40 Aligned_cols=281 Identities=37% Similarity=0.588 Sum_probs=226.8
Q ss_pred cceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCC-CCCeeeEeeeeeecCCceEEEEE
Q 015455 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD-HPNVIKLEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 118 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~l~~~~~~~~~~~~~lv~ 196 (406)
|++.+.||+|+||.||+|.+..+++.||+|.++......... ...+|+.++.++. |+|++++++++.+.....++++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~-~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQV-NNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhh-hHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence 678899999999999999998999999999987543332322 3446889999885 99999999999876446799999
Q ss_pred ecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCc
Q 015455 197 HYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMT 276 (406)
Q Consensus 197 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~ 276 (406)
||++++++..+......+++..++.++.|++.||.|||+.|++||||+|+||+++. +.+||+|||++........ ..
T Consensus 80 e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~--~~ 156 (282)
T cd07831 80 ELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP--YT 156 (282)
T ss_pred ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCCC--cC
Confidence 99999988887766668999999999999999999999999999999999999999 9999999999987643322 23
Q ss_pred CccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCC
Q 015455 277 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKP 356 (406)
Q Consensus 277 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (406)
...++..|+|||++.+...++.++|||||||++|||++|.+||.+.+..+.+..+....+.+..................
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd07831 157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNF 236 (282)
T ss_pred CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccC
Confidence 45678999999987654557889999999999999999999999999988889888888877765432221111111111
Q ss_pred CCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 357 REPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
.......+....+.++..+.+||.+||++||.+|||+.++|+||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 1111112233345678999999999999999999999999999997
No 90
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=3.8e-47 Score=362.50 Aligned_cols=250 Identities=24% Similarity=0.361 Sum_probs=208.7
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCceEEEEEecc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLYLVFHYM 199 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~ 199 (406)
+.||+|+||.||+|++..+++.||+|++..... .......+..|..++..+ +||||+++++++... ..+|+||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~--~~~~lv~E~~ 78 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTK--DRLFFVMEYV 78 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC--CeEEEEEeCC
Confidence 369999999999999989999999999976432 234455667788888866 899999999999874 4699999999
Q ss_pred cccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCcc
Q 015455 200 EHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRV 279 (406)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~ 279 (406)
+++.+.........+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++........ ......
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~-~~~~~~ 157 (321)
T cd05591 79 NGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV-TTTTFC 157 (321)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCc-cccccc
Confidence 9866655555556799999999999999999999999999999999999999999999999999876432221 234457
Q ss_pred ccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCc
Q 015455 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREP 359 (406)
Q Consensus 280 gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (406)
||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+..+.+..+.......
T Consensus 158 gt~~y~aPE~~~~~~-~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~--------------------- 215 (321)
T cd05591 158 GTPDYIAPEILQELE-YGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLY--------------------- 215 (321)
T ss_pred cCccccCHHHHcCCC-CCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC---------------------
Confidence 899999999887644 8999999999999999999999999998887777765421100
Q ss_pred hhhhhhhhcCCCCCChHHHHHHcccCCCCCCc-------CHHHHhcCccccc
Q 015455 360 YKRCIQETFKDFPPSSLPLIETLLAIDPAERL-------TATVALNSEVSYQ 404 (406)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-------ta~elL~h~~f~~ 404 (406)
...+++++.+||.+||+.||.+|| ++.++++||||..
T Consensus 216 --------p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~ 259 (321)
T cd05591 216 --------PVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE 259 (321)
T ss_pred --------CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCC
Confidence 124678899999999999999999 9999999999975
No 91
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=5.2e-47 Score=368.07 Aligned_cols=262 Identities=25% Similarity=0.331 Sum_probs=213.6
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~ 193 (406)
.++|++.+.||+|+||.||++++..+++.||+|++..... .......+.+|+.+++.++||||+++++++.. ...+|
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~--~~~~~ 119 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQD--DKYLY 119 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc--CCEEE
Confidence 4789999999999999999999999999999999875322 23344567789999999999999999998887 45699
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
+||||++++.+..+... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|.........
T Consensus 120 lv~Ey~~gg~L~~~l~~-~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~ 198 (370)
T cd05621 120 MVMEYMPGGDLVNLMSN-YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV 198 (370)
T ss_pred EEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCce
Confidence 99999987554444333 36899999999999999999999999999999999999999999999999999876543332
Q ss_pred CCcCccccCcccccccccCCc---cCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 274 PMTSRVVTLWYRPPELLLGAT---DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~---~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
.....+||+.|+|||++.+.. .++.++|||||||++|+|++|+.||.+.+....+..+........ ++.
T Consensus 199 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~--------~p~ 270 (370)
T cd05621 199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLN--------FPE 270 (370)
T ss_pred ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccC--------CCC
Confidence 234567999999999986532 378899999999999999999999999887777776654221110 000
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCC--CcCHHHHhcCccccc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAE--RLTATVALNSEVSYQ 404 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpta~elL~h~~f~~ 404 (406)
...+++.+.++|..||..+|.+ |+|+.++++||||+.
T Consensus 271 -----------------~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~ 309 (370)
T cd05621 271 -----------------DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKN 309 (370)
T ss_pred -----------------cccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCC
Confidence 0246788999999999866554 899999999999974
No 92
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=6.2e-47 Score=361.37 Aligned_cols=251 Identities=26% Similarity=0.428 Sum_probs=208.2
Q ss_pred eeeeccCCceEEEEEEEc---cCCcEEEEEEEecCCC--ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 121 IDKIGQGTYSNVYKAKDM---LTGKIVALKKVRFDNL--EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 121 ~~~lg~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++.||+|+||.||++++. .+++.||+|++..... .......+.+|+.+|+.++||||+++++++... ..+|++
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~--~~~~lv 78 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTG--GKLYLI 78 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecC--CeEEEE
Confidence 367999999999999863 4688999999875432 223345567899999999999999999998874 469999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
|||+.++.+.......+.+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++....... ..
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~ 157 (323)
T cd05584 79 LEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT-VT 157 (323)
T ss_pred EeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC-cc
Confidence 99999876665555566889999999999999999999999999999999999999999999999999875432222 23
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCC
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFK 355 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 355 (406)
....||+.|+|||++.+.. ++.++|||||||++|||++|+.||.+.+.......+.....
T Consensus 158 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~------------------- 217 (323)
T cd05584 158 HTFCGTIEYMAPEILMRSG-HGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL------------------- 217 (323)
T ss_pred cccCCCccccChhhccCCC-CCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-------------------
Confidence 3457899999999987654 88999999999999999999999998887776666644210
Q ss_pred CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCc-----CHHHHhcCccccc
Q 015455 356 PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERL-----TATVALNSEVSYQ 404 (406)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----ta~elL~h~~f~~ 404 (406)
...+.+++.+.+||.+||++||++|| ++.++++||||..
T Consensus 218 ----------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~ 261 (323)
T cd05584 218 ----------NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRH 261 (323)
T ss_pred ----------CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCC
Confidence 01125678899999999999999999 8999999999975
No 93
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=8.2e-46 Score=346.83 Aligned_cols=283 Identities=34% Similarity=0.613 Sum_probs=225.8
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++...||+|+||.||+|++..+|+.||+|++..........+.+.+|+.+++.++|+|++++++++.. ....+++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~~v 78 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRR--KRKLHLV 78 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEee--CCEEEEE
Confidence 46999999999999999999998899999999987554333334557789999999999999999999887 4568999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
|||++++++..+......+++..++.++.||+.||.|||+.|++|+||||+||+++.++.++|+|||++........ ..
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-~~ 157 (286)
T cd07847 79 FEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD-DY 157 (286)
T ss_pred EeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcc-cc
Confidence 99999998887776666899999999999999999999999999999999999999999999999999987654332 12
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH---hhhcCCCCcc
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEY---WKKSKLPNAT 352 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~ 352 (406)
....++..|+|||++.+...++.++||||||+++|+|++|.+||.+.+..+....+....+...... +....+.. .
T Consensus 158 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 236 (286)
T cd07847 158 TDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFK-G 236 (286)
T ss_pred cCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccc-c
Confidence 3446788999999987655588999999999999999999999999888777777766555433211 11100000 0
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
...+.......+....+.++..+.+||.+||+.||++|||+.+++.||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 237 LSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred ccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 00111111111233345678899999999999999999999999999998
No 94
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-47 Score=359.85 Aligned_cols=256 Identities=27% Similarity=0.471 Sum_probs=233.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
.-|.+.+.||+|-|.+|-+|++.-+|..||||++.+..++......+.+|+..|+.++|||||+||++...+ ..+|++
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQ--TKlyLi 95 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQ--TKLYLI 95 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhccc--ceEEEE
Confidence 458999999999999999999999999999999999888777778888999999999999999999988774 459999
Q ss_pred Eecccc-cHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEc-CCCcEEEeeeccccccCCCCCC
Q 015455 196 FHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 196 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~-~~~~~kl~DFgla~~~~~~~~~ 273 (406)
+|+-++ ++.+++......+++..+++|+.||+.|+.|+|+.-+|||||||+|+.+- .-|.|||+|||++-.+.++..
T Consensus 96 LELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~k- 174 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKK- 174 (864)
T ss_pred EEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcch-
Confidence 999987 77788888888999999999999999999999999999999999999875 568999999999998877765
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
.+..||+..|-|||+++|.....+++||||||||||-|+||++||...++.+.+..|+....+-+.
T Consensus 175 -L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPs------------- 240 (864)
T KOG4717|consen 175 -LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPS------------- 240 (864)
T ss_pred -hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCch-------------
Confidence 577899999999999999875567999999999999999999999999999999999886544432
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
+++.++++||..||..||++|.|.+++..++|++.
T Consensus 241 ----------------hvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~ 275 (864)
T KOG4717|consen 241 ----------------HVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQA 275 (864)
T ss_pred ----------------hhhHHHHHHHHHHHhcCchhhccHHHHhccccccC
Confidence 78999999999999999999999999999999984
No 95
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=9.4e-47 Score=360.12 Aligned_cols=255 Identities=24% Similarity=0.357 Sum_probs=211.8
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCceEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~~~~l 194 (406)
+|++.+.||+|+||.||+|++..+++.||+|++..... ..........|..++..+ .|++|+++++++... ..+|+
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~--~~~~l 78 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTM--DRLYF 78 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecC--CEEEE
Confidence 48899999999999999999999999999999986532 223344566788888877 589999999888774 46999
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
||||++++.+.........+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++...... ..
T Consensus 79 v~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~-~~ 157 (323)
T cd05616 79 VMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG-VT 157 (323)
T ss_pred EEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC-Cc
Confidence 99999876555455555679999999999999999999999999999999999999999999999999997543222 12
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
.....||+.|+|||++.+.. ++.++|||||||++|||++|+.||.+.+..+....+.......
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~---------------- 220 (323)
T cd05616 158 TKTFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY---------------- 220 (323)
T ss_pred cccCCCChhhcCHHHhcCCC-CCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC----------------
Confidence 34567899999999987654 8999999999999999999999999988877777765421111
Q ss_pred CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcC-----HHHHhcCccccc
Q 015455 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT-----ATVALNSEVSYQ 404 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----a~elL~h~~f~~ 404 (406)
...+++++.+||.+||++||.+|++ ..++++||||+.
T Consensus 221 -------------p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~ 262 (323)
T cd05616 221 -------------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 262 (323)
T ss_pred -------------CCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCC
Confidence 1257788999999999999999998 489999999974
No 96
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=8.4e-47 Score=359.33 Aligned_cols=250 Identities=26% Similarity=0.377 Sum_probs=205.0
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCceEEEEEecc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLYLVFHYM 199 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~ 199 (406)
+.||+|+||+||+|++..+++.||+|+++.... ..........|..++..+ +||||+++++++.. ...+|+||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~--~~~~~lv~e~~ 78 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQT--KEHLFFVMEYL 78 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEc--CCEEEEEEcCC
Confidence 369999999999999999999999999976432 223344455677777654 89999999998876 45699999999
Q ss_pred cccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCcc
Q 015455 200 EHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRV 279 (406)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~ 279 (406)
+++.+.........+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++...... ......+
T Consensus 79 ~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~~~~~~ 157 (316)
T cd05592 79 NGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKASTFC 157 (316)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Ccccccc
Confidence 887666555555689999999999999999999999999999999999999999999999999998653322 2234567
Q ss_pred ccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCc
Q 015455 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREP 359 (406)
Q Consensus 280 gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (406)
||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+..+....+.....
T Consensus 158 gt~~y~aPE~~~~~~-~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~----------------------- 213 (316)
T cd05592 158 GTPDYIAPEILKGQK-YNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRP----------------------- 213 (316)
T ss_pred CCccccCHHHHcCCC-CCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-----------------------
Confidence 899999999987754 89999999999999999999999999887776665543110
Q ss_pred hhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCH-HHHhcCccccc
Q 015455 360 YKRCIQETFKDFPPSSLPLIETLLAIDPAERLTA-TVALNSEVSYQ 404 (406)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta-~elL~h~~f~~ 404 (406)
.....+++++.+||.+||+.||.+||++ .+++.||||..
T Consensus 214 ------~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~ 253 (316)
T cd05592 214 ------HFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRG 253 (316)
T ss_pred ------CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCC
Confidence 0112567789999999999999999986 58889999975
No 97
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=6.9e-46 Score=349.22 Aligned_cols=286 Identities=40% Similarity=0.741 Sum_probs=230.6
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.+.||+|++|.||+|++..+|+.||+|.+............+.+|++++++++||||+++++++... ...|+|
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv 79 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSE--KRLYLV 79 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecC--CeEEEE
Confidence 579999999999999999999988999999999876544334445677899999999999999999998874 569999
Q ss_pred EecccccHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcC-CCcEEEeeeccccccCCCCCC
Q 015455 196 FHYMEHDLAGLAASP-EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD-DGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~-~~~~kl~DFgla~~~~~~~~~ 273 (406)
|||+++++....... ...+++..++.++.||+.||+|||++|++|+||+|+||+++. ++.+||+|||++....... .
T Consensus 80 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~-~ 158 (294)
T PLN00009 80 FEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV-R 158 (294)
T ss_pred EecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc-c
Confidence 999998887766443 334789999999999999999999999999999999999985 5679999999997654322 1
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcC-CCCcc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK-LPNAT 352 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~ 352 (406)
......+++.|+|||++.+...++.++|||||||++|+|++|++||...+..+...++....+.+....|.... +++..
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (294)
T PLN00009 159 TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYK 238 (294)
T ss_pred ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhh
Confidence 12344678999999988765558899999999999999999999999988888888888888888777665321 11111
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
...+. ..........+.+++.+.++|.+||+.||++||++.++|+||||.++
T Consensus 239 ~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~ 290 (294)
T PLN00009 239 SAFPK-WPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL 290 (294)
T ss_pred hhccc-CCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHH
Confidence 11110 00112223345688899999999999999999999999999999864
No 98
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=4.9e-46 Score=352.53 Aligned_cols=288 Identities=46% Similarity=0.825 Sum_probs=231.9
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecC------
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRM------ 188 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~------ 188 (406)
.++|++.+.||+|+||.||+|++..+++.||+|.+............+.+|+++++.++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 47899999999999999999999999999999998765433322335667999999999999999998875432
Q ss_pred CceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccC
Q 015455 189 SCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD 268 (406)
Q Consensus 189 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~ 268 (406)
...++++++|+++++...+......+++..++.++.||+.||+|||+.|++|+||||+|||+++++.++|+|||++....
T Consensus 87 ~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 166 (311)
T cd07866 87 RGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYD 166 (311)
T ss_pred CceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhcc
Confidence 33689999999999888877767789999999999999999999999999999999999999999999999999998654
Q ss_pred CCCCC----------CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Q 015455 269 PNHKH----------PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338 (406)
Q Consensus 269 ~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~ 338 (406)
..... ..+...+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+.......+....+.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 246 (311)
T cd07866 167 GPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTP 246 (311)
T ss_pred CCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 32221 12334668899999988765558899999999999999999999999999998889998888877
Q ss_pred CHHHhhhcC-CCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 339 SEEYWKKSK-LPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 339 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
....+.... .+..............+......+++.+.+||.+||..||.+|||+.++|.||||
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 247 TEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred ChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 665443321 1111110111111122333445677889999999999999999999999999998
No 99
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.3e-49 Score=339.85 Aligned_cols=289 Identities=45% Similarity=0.747 Sum_probs=238.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeee------cCC
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTS------RMS 189 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~------~~~ 189 (406)
..|+...+||+|.||.||+|+...+|+.||+|++..++-....-....+|+.+|..|+|+|++.+++.|.. +..
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 67899999999999999999999999999999875433222222345679999999999999999988743 233
Q ss_pred ceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCC
Q 015455 190 CSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDP 269 (406)
Q Consensus 190 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~ 269 (406)
..+|+||.+|++++..++......++..+++.++.+++.||.|+|+..|+|||+||+|+||+.+|.+||+|||+++.+..
T Consensus 97 ~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~ 176 (376)
T KOG0669|consen 97 ATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFST 176 (376)
T ss_pred ceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceec
Confidence 45999999999999999999989999999999999999999999999999999999999999999999999999977643
Q ss_pred CCC---CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhc
Q 015455 270 NHK---HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS 346 (406)
Q Consensus 270 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 346 (406)
... ...+..+.|.+|++||.+.|...|+++.|||+.||++.||.++.+.|.+.++..++..|...+|....+.|...
T Consensus 177 ~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~ 256 (376)
T KOG0669|consen 177 SKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNV 256 (376)
T ss_pred ccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCc
Confidence 322 22455678999999999999999999999999999999999999999999999999999999999999888764
Q ss_pred C-CCCcccC--C-CCCchhhhhhhhcC--CCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 347 K-LPNATLF--K-PREPYKRCIQETFK--DFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 347 ~-~~~~~~~--~-~~~~~~~~~~~~~~--~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
. +|-.... . ....-.+.+....+ .-++++.||+.+||..||.+|++++++|+|.||..
T Consensus 257 d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~k 320 (376)
T KOG0669|consen 257 DNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWK 320 (376)
T ss_pred ccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhc
Confidence 3 2211111 0 01111112222222 22568999999999999999999999999999963
No 100
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=8.1e-46 Score=348.11 Aligned_cols=284 Identities=36% Similarity=0.673 Sum_probs=225.7
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
.++|++.+.||+|+||.||+|.+..+++.||+|.+...... .....+.+|+++++.++|+||+++++++.. ....++
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~l 80 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE-GAPFTAIREASLLKDLKHANIVTLHDIIHT--KKTLTL 80 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc-CCchhHHHHHHHHhhCCCcceeeEEEEEec--CCeEEE
Confidence 37899999999999999999999889999999998754322 122345679999999999999999999886 456999
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
||||+.+++...+......+++..++.++.|++.||.|||+.||+||||||+|||++.++.+||+|||++........ .
T Consensus 81 v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-~ 159 (291)
T cd07844 81 VFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK-T 159 (291)
T ss_pred EEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCc-c
Confidence 999999988887766666889999999999999999999999999999999999999999999999999875432211 1
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHhCCCCHHHhhhcCCCCc-c
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRT-EVEQLHKIYKLCGSPSEEYWKKSKLPNA-T 352 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~ 352 (406)
.....++..|+|||++.+...++.++||||+|+++|+|++|+.||.+.. ..+.+..+.+.++.+..+.|........ .
T Consensus 160 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (291)
T cd07844 160 YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFK 239 (291)
T ss_pred ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccc
Confidence 2233568899999998765558899999999999999999999998776 5677788888888877766544321111 0
Q ss_pred cCCCCCchhhhhhhhcCCCC--CChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 353 LFKPREPYKRCIQETFKDFP--PSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~--~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
...........+......++ ..+.++|.+||+.||.+|||+.++|+||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 240 PYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred cccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 00000000111223333455 788999999999999999999999999998
No 101
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=6e-47 Score=366.82 Aligned_cols=260 Identities=27% Similarity=0.375 Sum_probs=212.9
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
++|++++.||+|+||.||+|++..+++.||+|+++.... .......+.+|+.++..++||||+++++.+.+ ...+|+
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~--~~~~~l 78 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQD--KRNLYL 78 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc--CCEEEE
Confidence 469999999999999999999999999999999975432 33445677889999999999999999998877 456999
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC--
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK-- 272 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~-- 272 (406)
||||++++.+..+......+++..++.++.|++.||.|||+.||+||||||+|||++.+++++|+|||++..+.....
T Consensus 79 v~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 79 IMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred EEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 999999866555555556799999999999999999999999999999999999999999999999999875532110
Q ss_pred --------------------------------CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCC
Q 015455 273 --------------------------------HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMP 320 (406)
Q Consensus 273 --------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~ 320 (406)
......+||+.|+|||++.+.. ++.++|||||||++|||++|++||.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~-~~~~~DiwSlGvilyel~tG~~Pf~ 237 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTG-YNKLCDWWSLGVIMYEMLIGYPPFC 237 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCC-CCCcceeccccceeeecccCCCCCC
Confidence 0112457999999999987754 8999999999999999999999999
Q ss_pred CCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCc---CHHHHh
Q 015455 321 GRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERL---TATVAL 397 (406)
Q Consensus 321 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---ta~elL 397 (406)
+.+..+....+....... .+|. ...+++++.+||.+|+. ||.+|+ ++.+++
T Consensus 238 ~~~~~~~~~~i~~~~~~~--------~~p~-----------------~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~ 291 (360)
T cd05627 238 SETPQETYRKVMNWKETL--------VFPP-----------------EVPISEKAKDLILRFCT-DSENRIGSNGVEEIK 291 (360)
T ss_pred CCCHHHHHHHHHcCCCce--------ecCC-----------------CCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHh
Confidence 988877776665321100 0000 01367889999999874 999998 489999
Q ss_pred cCccccc
Q 015455 398 NSEVSYQ 404 (406)
Q Consensus 398 ~h~~f~~ 404 (406)
+||||+.
T Consensus 292 ~hp~f~~ 298 (360)
T cd05627 292 SHPFFEG 298 (360)
T ss_pred cCCCCCC
Confidence 9999975
No 102
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=2.3e-46 Score=358.62 Aligned_cols=263 Identities=25% Similarity=0.330 Sum_probs=212.7
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCC-CChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDN-LEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
++|++.+.||+|+||.||++++..+++.||+|++.... ........+.+|+.++..++|+||+++++++.. ...+|+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~l 78 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQD--ENNLYL 78 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEec--CCeEEE
Confidence 47999999999999999999999999999999997532 233345567889999999999999999998887 456999
Q ss_pred EEeccccc-HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 195 VFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 195 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
||||+.++ +...+......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..+......
T Consensus 79 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 158 (331)
T cd05597 79 VMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTV 158 (331)
T ss_pred EEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCc
Confidence 99999775 44455444567999999999999999999999999999999999999999999999999999776544332
Q ss_pred CCcCccccCcccccccccC----CccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCC
Q 015455 274 PMTSRVVTLWYRPPELLLG----ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLP 349 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 349 (406)
......||+.|+|||++.+ ...++.++|||||||++|+|++|+.||.+.+..+....+........
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~---------- 228 (331)
T cd05597 159 QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQ---------- 228 (331)
T ss_pred cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCccc----------
Confidence 2333578999999999863 23478899999999999999999999998877776666543211000
Q ss_pred CcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCC--CcCHHHHhcCccccc
Q 015455 350 NATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAE--RLTATVALNSEVSYQ 404 (406)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpta~elL~h~~f~~ 404 (406)
+......+++.+.+||++||..++.+ |+++.++++||||..
T Consensus 229 --------------~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~ 271 (331)
T cd05597 229 --------------FPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEG 271 (331)
T ss_pred --------------CCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCC
Confidence 01111347888999999999765544 789999999999975
No 103
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.2e-46 Score=358.25 Aligned_cols=250 Identities=25% Similarity=0.364 Sum_probs=204.4
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCceEEEEEecc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLYLVFHYM 199 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~ 199 (406)
+.||+|+||.||+|++..+|+.||+|.++.... ..........|..++..+ +||||+++++++... ..+|+||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~--~~~~lv~E~~ 78 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTK--EHLFFVMEFL 78 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeC--CEEEEEECCC
Confidence 469999999999999999999999999976432 122344566688888754 899999999998874 5699999999
Q ss_pred cccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCcc
Q 015455 200 EHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRV 279 (406)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~ 279 (406)
.++.+.........+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++....... .......
T Consensus 79 ~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~ 157 (316)
T cd05620 79 NGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD-NRASTFC 157 (316)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC-CceeccC
Confidence 986655555555689999999999999999999999999999999999999999999999999987532221 2234567
Q ss_pred ccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCc
Q 015455 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREP 359 (406)
Q Consensus 280 gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (406)
||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+..+....+.... +
T Consensus 158 gt~~y~aPE~~~~~~-~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~--~--------------------- 213 (316)
T cd05620 158 GTPDYIAPEILQGLK-YTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDT--P--------------------- 213 (316)
T ss_pred CCcCccCHHHHcCCC-CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--C---------------------
Confidence 899999999987754 8999999999999999999999999887766665553311 0
Q ss_pred hhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCH-HHHhcCccccc
Q 015455 360 YKRCIQETFKDFPPSSLPLIETLLAIDPAERLTA-TVALNSEVSYQ 404 (406)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta-~elL~h~~f~~ 404 (406)
.....+++++.+||.+||+.||.+||++ +++++||||+.
T Consensus 214 ------~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~ 253 (316)
T cd05620 214 ------HYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKT 253 (316)
T ss_pred ------CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCC
Confidence 0012467789999999999999999997 58889999975
No 104
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.3e-46 Score=350.17 Aligned_cols=253 Identities=27% Similarity=0.386 Sum_probs=203.3
Q ss_pred eccCCceEEEEEEEccCCcEEEEEEEecCCCC-hHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEeccccc
Q 015455 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-PESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD 202 (406)
Q Consensus 124 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~~ 202 (406)
||+|+||+||++.+..+|+.||+|.+...... ....+.+..|+.+++.++||||+++.+++... ...|++|||++++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~--~~~~lv~e~~~~g 78 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTK--TDLCLVMTIMNGG 78 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCC--CeEEEEEeCCCCC
Confidence 79999999999999999999999998754332 22345667899999999999999999888764 4599999999876
Q ss_pred HHHHhc----CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCc
Q 015455 203 LAGLAA----SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR 278 (406)
Q Consensus 203 l~~~~~----~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~ 278 (406)
.+.... .....+++..++.++.||+.||.|||+.||+||||||+||+++.++.++|+|||++..+...... ....
T Consensus 79 ~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~ 157 (280)
T cd05608 79 DLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK-TKGY 157 (280)
T ss_pred CHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc-cccc
Confidence 554322 24457999999999999999999999999999999999999999999999999999876543322 3345
Q ss_pred cccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCC
Q 015455 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPRE 358 (406)
Q Consensus 279 ~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (406)
.||+.|+|||++.+.. ++.++|||||||++|+|++|+.||...........+.......+.
T Consensus 158 ~g~~~y~aPE~~~~~~-~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~------------------ 218 (280)
T cd05608 158 AGTPGFMAPELLQGEE-YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSV------------------ 218 (280)
T ss_pred CCCcCccCHHHhcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCC------------------
Confidence 7899999999988754 899999999999999999999999875543222222211100000
Q ss_pred chhhhhhhhcCCCCCChHHHHHHcccCCCCCCc-----CHHHHhcCcccccc
Q 015455 359 PYKRCIQETFKDFPPSSLPLIETLLAIDPAERL-----TATVALNSEVSYQF 405 (406)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----ta~elL~h~~f~~~ 405 (406)
.....+++.+.+++.+||+.||++|| |++++++||||+++
T Consensus 219 -------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~ 263 (280)
T cd05608 219 -------TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDL 263 (280)
T ss_pred -------CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence 01135788899999999999999999 89999999999864
No 105
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=4.6e-46 Score=359.71 Aligned_cols=284 Identities=30% Similarity=0.530 Sum_probs=227.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecC----Cce
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRM----SCS 191 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~----~~~ 191 (406)
++|++.+.||+|+||.||+|++..+|+.||+|.+............+.+|+.+++.++||||+++++++.... ...
T Consensus 16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 95 (353)
T cd07850 16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQD 95 (353)
T ss_pred cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCc
Confidence 6899999999999999999999999999999998654444445566778999999999999999999886432 235
Q ss_pred EEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC
Q 015455 192 LYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 192 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~ 271 (406)
.|+||||+.+++...+... +++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++.......
T Consensus 96 ~~lv~e~~~~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~ 172 (353)
T cd07850 96 VYLVMELMDANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 172 (353)
T ss_pred EEEEEeccCCCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCC
Confidence 7999999999888766442 8999999999999999999999999999999999999999999999999998764332
Q ss_pred CCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCc
Q 015455 272 KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351 (406)
Q Consensus 272 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 351 (406)
. .....+++.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+.......+....+.++.++.........
T Consensus 173 ~--~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (353)
T cd07850 173 M--MTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVR 249 (353)
T ss_pred C--CCCCcccccccCHHHHhCCC-CCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhh
Confidence 2 23456789999999987754 89999999999999999999999999998889999999888887655433211000
Q ss_pred ccC-----CCCCchhhhh---------hhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 352 TLF-----KPREPYKRCI---------QETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 352 ~~~-----~~~~~~~~~~---------~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
... .....+.... .......++.+.+||.+||+.||++|||+.++|.||||+.|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~ 317 (353)
T cd07850 250 NYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVW 317 (353)
T ss_pred HHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhc
Confidence 000 0000000000 00012345678999999999999999999999999999865
No 106
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.1e-46 Score=358.86 Aligned_cols=250 Identities=25% Similarity=0.388 Sum_probs=208.1
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCceEEEEEecc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLYLVFHYM 199 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~ 199 (406)
+.||+|+||+||+|++..+++.||+|+++.... .......+.+|..++..+ +||||+++++++... ..+|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~--~~~~lv~e~~ 78 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTK--DRLFFVMEYV 78 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC--CEEEEEEcCC
Confidence 469999999999999989999999999986432 233455667788999888 799999999998874 4699999999
Q ss_pred cccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCcc
Q 015455 200 EHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRV 279 (406)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~ 279 (406)
.++.+.........+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++....... ......+
T Consensus 79 ~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~ 157 (318)
T cd05570 79 NGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG-VTTSTFC 157 (318)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCC-Cccccee
Confidence 987666555556689999999999999999999999999999999999999999999999999987532222 1233457
Q ss_pred ccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCc
Q 015455 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREP 359 (406)
Q Consensus 280 gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (406)
||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+.......+.....
T Consensus 158 g~~~y~aPE~~~~~~-~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~----------------------- 213 (318)
T cd05570 158 GTPDYIAPEILSYQP-YGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEV----------------------- 213 (318)
T ss_pred cCccccCHHHhcCCC-CCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC-----------------------
Confidence 899999999987754 89999999999999999999999998877666655543110
Q ss_pred hhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCH-----HHHhcCccccc
Q 015455 360 YKRCIQETFKDFPPSSLPLIETLLAIDPAERLTA-----TVALNSEVSYQ 404 (406)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta-----~elL~h~~f~~ 404 (406)
.....+++.+.+||++||+.||.+|||+ .++++||||+.
T Consensus 214 ------~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~ 257 (318)
T cd05570 214 ------RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFRE 257 (318)
T ss_pred ------CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 0112567889999999999999999999 99999999975
No 107
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=9.1e-46 Score=346.36 Aligned_cols=285 Identities=56% Similarity=0.975 Sum_probs=235.8
Q ss_pred cceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEe
Q 015455 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFH 197 (406)
Q Consensus 118 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e 197 (406)
|++.+.||+|+||.||+|.+..+|+.||+|.+............+.+|+++++.++|+|++++++++........++++|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 67889999999999999999889999999999876433344456778999999999999999999988753467999999
Q ss_pred cccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcC
Q 015455 198 YMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTS 277 (406)
Q Consensus 198 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~ 277 (406)
|+++++...+......+++..++.++.||+.||+|||+.|++|+||+|+||++++++.++|+|||++.............
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 160 (287)
T cd07840 81 YMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTN 160 (287)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccc
Confidence 99998888777666789999999999999999999999999999999999999999999999999998775544323344
Q ss_pred ccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCC-CCcccCCC
Q 015455 278 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL-PNATLFKP 356 (406)
Q Consensus 278 ~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~ 356 (406)
..++..|+|||.+.+...++.++||||||+++|+|++|+.||...+....+..+.+..+.+....|..... ........
T Consensus 161 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (287)
T cd07840 161 RVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKP 240 (287)
T ss_pred cccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccc
Confidence 56788999999887655588999999999999999999999999998888899988888777665543221 11122222
Q ss_pred CCchhhhhhhhcCCC-CCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 357 REPYKRCIQETFKDF-PPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 357 ~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
.......+....... ++.+.++|.+||+.||.+|||+.++++||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 241 KKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred cccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 233333344444554 8899999999999999999999999999997
No 108
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.2e-45 Score=345.52 Aligned_cols=282 Identities=37% Similarity=0.693 Sum_probs=230.4
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~ 196 (406)
+|++.+.||.|++|.||+|++..+|..||||.++..... .....+.+|+.+++.++|+||+++++++.+. ...+++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~ 77 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE-GTPSTAIREISLMKELKHENIVRLHDVIHTE--NKLMLVF 77 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc-cchHHHHHHHHHHHhhcCCCEeeeeeeEeeC--CcEEEEE
Confidence 488999999999999999999889999999999765432 2234566799999999999999999999874 4589999
Q ss_pred ecccccHHHHhcCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 197 HYMEHDLAGLAASPE--VKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 197 e~~~~~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
||+++++...+.... ..+++..+..++.|++.||.|||+.|++||||||+||++++++.++|+|||++........ .
T Consensus 78 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~-~ 156 (284)
T cd07836 78 EYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN-T 156 (284)
T ss_pred ecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-c
Confidence 999998887665433 5689999999999999999999999999999999999999999999999999976543222 1
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
.....+++.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+....+.+....+....|...........
T Consensus 157 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd07836 157 FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKP 236 (284)
T ss_pred cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcc
Confidence 23346788999999987655578999999999999999999999999999999999998888887776654331111111
Q ss_pred CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
..............+.+++.+.++|.+||+.||.+|||+.++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 237 TFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred cccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 111111122233445678999999999999999999999999999998
No 109
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.2e-46 Score=359.40 Aligned_cols=250 Identities=27% Similarity=0.373 Sum_probs=205.1
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHH-HHhhCCCCCeeeEeeeeeecCCceEEEEEecc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREIL-ILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYM 199 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~-~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~ 199 (406)
+.||+|+||+||+|++..+|+.||+|++..... .......+..|.. +++.++||||+++++.+.. ....|+||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~--~~~~~lv~e~~ 78 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT--ADKLYFVLDYV 78 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe--CCEEEEEEcCC
Confidence 369999999999999999999999999975432 1222334445555 4578999999999998877 45699999999
Q ss_pred cccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCcc
Q 015455 200 EHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRV 279 (406)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~ 279 (406)
.++.+.........+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... ........
T Consensus 79 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~ 157 (323)
T cd05575 79 NGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH-SKTTSTFC 157 (323)
T ss_pred CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC-CCcccccc
Confidence 98766555555668999999999999999999999999999999999999999999999999998754222 12234567
Q ss_pred ccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCc
Q 015455 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREP 359 (406)
Q Consensus 280 gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (406)
||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+..+....+.....
T Consensus 158 gt~~y~aPE~~~~~~-~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~----------------------- 213 (323)
T cd05575 158 GTPEYLAPEVLRKQP-YDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPL----------------------- 213 (323)
T ss_pred CChhhcChhhhcCCC-CCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC-----------------------
Confidence 899999999987654 89999999999999999999999998887776666643210
Q ss_pred hhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCH----HHHhcCccccc
Q 015455 360 YKRCIQETFKDFPPSSLPLIETLLAIDPAERLTA----TVALNSEVSYQ 404 (406)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta----~elL~h~~f~~ 404 (406)
...+.+++.+.++|.+||+.||.+||++ .++++||||..
T Consensus 214 ------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~ 256 (323)
T cd05575 214 ------RLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSS 256 (323)
T ss_pred ------CCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCC
Confidence 1113568889999999999999999997 69999999975
No 110
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=5.4e-47 Score=360.99 Aligned_cols=251 Identities=27% Similarity=0.404 Sum_probs=208.4
Q ss_pred eeeccCCceEEEEEEEc---cCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEec
Q 015455 122 DKIGQGTYSNVYKAKDM---LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHY 198 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~ 198 (406)
+.||+|+||.||++++. .+|+.||+|++............+.+|++++++++||||+++++++.. ...+|+||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQT--EGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEc--CCEEEEEEcC
Confidence 57999999999999763 578999999998654433344556789999999999999999999887 4569999999
Q ss_pred ccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCc
Q 015455 199 MEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR 278 (406)
Q Consensus 199 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~ 278 (406)
++++.+.........+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++....... ......
T Consensus 80 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~~~~~~ 158 (318)
T cd05582 80 LRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-KKAYSF 158 (318)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-Cceecc
Confidence 9876555444555679999999999999999999999999999999999999999999999999998654332 223456
Q ss_pred cccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCC
Q 015455 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPRE 358 (406)
Q Consensus 279 ~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (406)
.||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+..+....+.+....
T Consensus 159 ~g~~~y~aPE~~~~~~-~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~--------------------- 216 (318)
T cd05582 159 CGTVEYMAPEVVNRRG-HTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLG--------------------- 216 (318)
T ss_pred cCChhhcCHHHHcCCC-CCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCC---------------------
Confidence 7899999999987644 889999999999999999999999988877766665442110
Q ss_pred chhhhhhhhcCCCCCChHHHHHHcccCCCCCCcC-----HHHHhcCcccccc
Q 015455 359 PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT-----ATVALNSEVSYQF 405 (406)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----a~elL~h~~f~~~ 405 (406)
....+++.+.+||++||+.||.+||| +.+++.||||..+
T Consensus 217 --------~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 217 --------MPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred --------CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 11256788999999999999999999 7889999999753
No 111
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.1e-46 Score=358.57 Aligned_cols=250 Identities=22% Similarity=0.370 Sum_probs=201.6
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCceEEEEEecc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLYLVFHYM 199 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~ 199 (406)
+.||+|+||.||+|++..+++.||+|+++.... .......+.+|..++..+ +||||+++++++... ..+|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~--~~~~lv~e~~ 78 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTE--SRLFFVIEFV 78 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcC--CEEEEEEeCC
Confidence 469999999999999999999999999986533 233455677899999988 799999999998874 5699999999
Q ss_pred cccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCcc
Q 015455 200 EHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRV 279 (406)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~ 279 (406)
+++.+.........+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...... ......+
T Consensus 79 ~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~ 157 (329)
T cd05588 79 SGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG-DTTSTFC 157 (329)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCC-Ccccccc
Confidence 986655555555689999999999999999999999999999999999999999999999999987532211 1234567
Q ss_pred ccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCCh--------HH-HHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTE--------VE-QLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 280 gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~--------~~-~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
||+.|+|||++.+.. ++.++|||||||++|+|++|+.||..... .+ ..+.+...
T Consensus 158 gt~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~---------------- 220 (329)
T cd05588 158 GTPNYIAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK---------------- 220 (329)
T ss_pred CCccccCHHHHcCCC-CCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC----------------
Confidence 899999999988754 89999999999999999999999963211 11 11111110
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcC------HHHHhcCccccc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT------ATVALNSEVSYQ 404 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------a~elL~h~~f~~ 404 (406)
.......+++.+.++|.+||+.||.+|+| +.++++||||..
T Consensus 221 -------------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~ 267 (329)
T cd05588 221 -------------QIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN 267 (329)
T ss_pred -------------CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 00011356778999999999999999997 789999999974
No 112
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=3e-46 Score=363.00 Aligned_cols=262 Identities=26% Similarity=0.329 Sum_probs=213.5
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~ 193 (406)
.++|++.+.||+|+||.||+|++..+++.||+|++..... .......+.+|+.+++.++||||+++++.+.. ...+|
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~--~~~~~ 119 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD--DRYLY 119 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc--CCEEE
Confidence 3789999999999999999999999999999999875322 23334567789999999999999999998876 45699
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
+||||++++.+..+... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 120 lv~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~ 198 (371)
T cd05622 120 MVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 198 (371)
T ss_pred EEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcc
Confidence 99999987655444333 35899999999999999999999999999999999999999999999999999876543333
Q ss_pred CCcCccccCcccccccccCCc---cCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 274 PMTSRVVTLWYRPPELLLGAT---DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~---~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
.....+||+.|+|||++.+.. .++.++|||||||++|||++|..||.+.+.......+........ ++
T Consensus 199 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~--------~~- 269 (371)
T cd05622 199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLT--------FP- 269 (371)
T ss_pred cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCccc--------CC-
Confidence 334567999999999986432 378899999999999999999999999888777777654221110 00
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCC--CcCHHHHhcCccccc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAE--RLTATVALNSEVSYQ 404 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpta~elL~h~~f~~ 404 (406)
....+++.+.+||..||..++.+ |+++.++++|+||+.
T Consensus 270 ----------------~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~ 309 (371)
T cd05622 270 ----------------DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN 309 (371)
T ss_pred ----------------CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCC
Confidence 01357888999999999844443 789999999999975
No 113
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.6e-46 Score=360.13 Aligned_cols=277 Identities=25% Similarity=0.308 Sum_probs=209.7
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
..|++++.||+|+||.||+|++..++..||+|+..... ...|+.++++++||||+++++++... ...++|
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~--------~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv 135 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT--------TLIEAMLLQNVNHPSVIRMKDTLVSG--AITCMV 135 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc--------cHHHHHHHHhCCCCCCcChhheEEeC--CeeEEE
Confidence 57999999999999999999998899999999754321 24589999999999999999998874 458999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
||++.+++...+......+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++....... ..
T Consensus 136 ~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~--~~ 213 (357)
T PHA03209 136 LPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP--AF 213 (357)
T ss_pred EEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCc--cc
Confidence 9999999988887777789999999999999999999999999999999999999999999999999997543221 22
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCC-CCCCCh---------HHHHHHHHHHhCCCCHHHhhh
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPI-MPGRTE---------VEQLHKIYKLCGSPSEEYWKK 345 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~p-f~~~~~---------~~~~~~i~~~~~~~~~~~~~~ 345 (406)
....||+.|+|||++.+.. ++.++|||||||++|||+++..+ |..... ...+..+....+..+......
T Consensus 214 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 292 (357)
T PHA03209 214 LGLAGTVETNAPEVLARDK-YNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRD 292 (357)
T ss_pred ccccccccccCCeecCCCC-CCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCC
Confidence 3457899999999987754 89999999999999999985544 443221 223344444444333221100
Q ss_pred cC--CCCc--c-cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 346 SK--LPNA--T-LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 346 ~~--~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
.. .... . ......+...........++.++.+||.+||+.||.+||||.|+|+||||+++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~~ 357 (357)
T PHA03209 293 PGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL 357 (357)
T ss_pred CccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhccC
Confidence 00 0000 0 00000000010011123577889999999999999999999999999999874
No 114
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=4.5e-46 Score=355.37 Aligned_cols=256 Identities=26% Similarity=0.388 Sum_probs=211.5
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCC-CCCeeeEeeeeeecCCceEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLD-HPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~l~~~~~~~~~~~~~l 194 (406)
+|+..+.||+|+||.||+|++..+|+.||+|++..... .......+..|..++..+. |++|+++++++... ..+|+
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~--~~~~l 78 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTV--DRLYF 78 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecC--CEEEE
Confidence 47889999999999999999999999999999976432 2334456677889998885 57788888888764 46999
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
||||++++.+.........+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ..
T Consensus 79 v~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~-~~ 157 (323)
T cd05615 79 VMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG-VT 157 (323)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC-cc
Confidence 99999986666555555689999999999999999999999999999999999999999999999999987643222 12
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
.....||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+.......+......
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~----------------- 219 (323)
T cd05615 158 TRTFCGTPDYIAPEIIAYQP-YGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVS----------------- 219 (323)
T ss_pred ccCccCCccccCHHHHcCCC-CCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-----------------
Confidence 33456899999999987644 899999999999999999999999998877777766542111
Q ss_pred CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcC-----HHHHhcCcccccc
Q 015455 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT-----ATVALNSEVSYQF 405 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----a~elL~h~~f~~~ 405 (406)
..+.+++++.+++.+||++||.+|++ ..++++||||+.+
T Consensus 220 ------------~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 220 ------------YPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred ------------CCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 11256788999999999999999997 5899999999853
No 115
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.1e-45 Score=346.07 Aligned_cols=284 Identities=33% Similarity=0.592 Sum_probs=226.8
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.+.||+|+||.||+|.+..+++.||+|.+..........+.+.+|+++++.++||||+++++++.. ....|++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 78 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRR--KKRLYLV 78 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhccc--CCeEEEE
Confidence 36899999999999999999988889999999886544333345567789999999999999999999876 4569999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
|||+.++++..+......+++..++.++.||+.||+|||+.|++|+||+|+||++++++.++|+|||++....... ...
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~-~~~ 157 (286)
T cd07846 79 FEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-EVY 157 (286)
T ss_pred EecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-ccc
Confidence 9999998887776666679999999999999999999999999999999999999999999999999998764433 223
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC--ccc
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN--ATL 353 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~ 353 (406)
....++..|+|||++.+...++.++||||||+++|+|++|++||.+....+....+....+.............. ...
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07846 158 TDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGM 237 (286)
T ss_pred CcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcc
Confidence 345679999999998765557889999999999999999999999888777777777665554332111000000 000
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
..+............+.++..+.+||..||+.||.+|||+.++|+||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 238 RLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred ccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 0111111122333456788999999999999999999999999999998
No 116
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.3e-45 Score=354.13 Aligned_cols=287 Identities=34% Similarity=0.572 Sum_probs=229.3
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecC---CceE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRM---SCSL 192 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~---~~~~ 192 (406)
++|++.+.||+|+||.||+|++..+|+.||+|.+.... .......+.+|+.+++.++||||+++++++.... ....
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE-HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 68999999999999999999999999999999986432 2233455778999999999999999998875432 2458
Q ss_pred EEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC
Q 015455 193 YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK 272 (406)
Q Consensus 193 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~ 272 (406)
|+++||+++++...+.. ..+++..++.++.|++.||.|||+.||+||||||+|||++.++.+||+|||++........
T Consensus 84 ~lv~e~~~~~l~~~~~~--~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 161 (336)
T cd07849 84 YIVQELMETDLYKLIKT--QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHD 161 (336)
T ss_pred EEEehhcccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccccc
Confidence 99999999988776643 3799999999999999999999999999999999999999999999999999987643322
Q ss_pred C--CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 273 H--PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 273 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
. ......+|+.|+|||.+.+...++.++|||||||++|+|++|++||.+.+.......+....+.+..+.+.......
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (336)
T cd07849 162 HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLR 241 (336)
T ss_pred ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchh
Confidence 1 12335679999999987665558899999999999999999999999998888888888888877765554322111
Q ss_pred cccC--CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 351 ATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 351 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
.... .........+....+.+++.+.+||.+||+.||.+|||+.++++||||+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~ 298 (336)
T cd07849 242 ARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY 298 (336)
T ss_pred hhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence 1000 000001111222345678899999999999999999999999999999875
No 117
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3.3e-46 Score=357.19 Aligned_cols=250 Identities=22% Similarity=0.386 Sum_probs=201.2
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCceEEEEEecc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLYLVFHYM 199 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~ 199 (406)
+.||+|+||.||+|++..+++.||+|++..... .......+.+|+.++.++ +||||+++++++... ...|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~--~~~~lv~E~~ 78 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE--SRLFFVIEYV 78 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeC--CEEEEEEeCC
Confidence 469999999999999999999999999986533 234455677899888877 899999999998874 5699999999
Q ss_pred cccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCcc
Q 015455 200 EHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRV 279 (406)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~ 279 (406)
+++.+.........+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...... .......
T Consensus 79 ~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~-~~~~~~~ 157 (329)
T cd05618 79 NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-DTTSTFC 157 (329)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC-Ccccccc
Confidence 987665555555689999999999999999999999999999999999999999999999999997542221 1234467
Q ss_pred ccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCCh--------HH-HHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTE--------VE-QLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 280 gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~--------~~-~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
||+.|+|||++.+.. ++.++|||||||++|+|++|+.||..... .. ....+....
T Consensus 158 gt~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~--------------- 221 (329)
T cd05618 158 GTPNYIAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ--------------- 221 (329)
T ss_pred CCccccCHHHHcCCC-CCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC---------------
Confidence 899999999987754 89999999999999999999999953211 11 111111100
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcC------HHHHhcCccccc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT------ATVALNSEVSYQ 404 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------a~elL~h~~f~~ 404 (406)
...+..++..+.+||++||+.||.+||| +.++++||||+.
T Consensus 222 --------------~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~ 267 (329)
T cd05618 222 --------------IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 267 (329)
T ss_pred --------------CCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 0111356778899999999999999998 589999999975
No 118
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=6.1e-46 Score=348.25 Aligned_cols=258 Identities=25% Similarity=0.385 Sum_probs=210.0
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC-hHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-PESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
.|++.+.||+|+||.||++.+..+++.||+|++...... ......+.+|+.+++.++||||+++++.+..+ ..++++
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv 78 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK--DALCLV 78 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCC--CeEEEE
Confidence 488999999999999999999889999999998764432 22234567899999999999999999988764 469999
Q ss_pred EecccccHHH-HhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 196 FHYMEHDLAG-LAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 196 ~e~~~~~l~~-~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
|||+.++.+. .+.. ....+++..+..++.|++.||.|||+.|++||||||+||++++++.++|+|||++........
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~- 157 (285)
T cd05605 79 LTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET- 157 (285)
T ss_pred EeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc-
Confidence 9999876554 3322 335699999999999999999999999999999999999999999999999999987643222
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
.....|++.|+|||++.+.. ++.++||||+||++|+|++|+.||.+.+.......+........
T Consensus 158 -~~~~~~~~~y~aPE~~~~~~-~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-------------- 221 (285)
T cd05605 158 -IRGRVGTVGYMAPEVVKNER-YTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQ-------------- 221 (285)
T ss_pred -cccccCCCCccCcHHhcCCC-CCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcc--------------
Confidence 23457899999999987654 89999999999999999999999988766544444333211100
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCc-----CHHHHhcCccccc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERL-----TATVALNSEVSYQ 404 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----ta~elL~h~~f~~ 404 (406)
......+++.+.+||.+||+.||.+|| +++++++||||..
T Consensus 222 -----------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~ 266 (285)
T cd05605 222 -----------EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRT 266 (285)
T ss_pred -----------cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence 011135778899999999999999999 9999999999985
No 119
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.8e-46 Score=354.77 Aligned_cols=251 Identities=26% Similarity=0.400 Sum_probs=204.5
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhh-CCCCCeeeEeeeeeecCCceEEEEEecc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRR-LDHPNVIKLEGLVTSRMSCSLYLVFHYM 199 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~-l~h~~iv~l~~~~~~~~~~~~~lv~e~~ 199 (406)
+.||+|+||+||+|++..+++.||||+++.... ..........|..++.. ++||||+++++++.+. ..+|+||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~--~~~~lv~ey~ 78 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTK--ENLFFVMEYL 78 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeC--CEEEEEEeCC
Confidence 469999999999999999999999999976432 12233455668888876 4999999999998874 4699999999
Q ss_pred cccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCcc
Q 015455 200 EHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRV 279 (406)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~ 279 (406)
+++.+.........+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++....... .......
T Consensus 79 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~ 157 (316)
T cd05619 79 NGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD-AKTCTFC 157 (316)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-Cceeeec
Confidence 876655555555678999999999999999999999999999999999999999999999999987542221 1234567
Q ss_pred ccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCc
Q 015455 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREP 359 (406)
Q Consensus 280 gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (406)
||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+..+....+.... + .+
T Consensus 158 gt~~y~aPE~~~~~~-~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~--~--------~~----------- 215 (316)
T cd05619 158 GTPDYIAPEILLGQK-YNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDN--P--------CY----------- 215 (316)
T ss_pred CCccccCHHHHcCCC-CCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--C--------CC-----------
Confidence 899999999987654 8999999999999999999999999887766665553210 0 00
Q ss_pred hhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHH-HHhcCcccccc
Q 015455 360 YKRCIQETFKDFPPSSLPLIETLLAIDPAERLTAT-VALNSEVSYQF 405 (406)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~-elL~h~~f~~~ 405 (406)
...++.++.+||.+||+.||.+||++. ++++||||+..
T Consensus 216 --------~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05619 216 --------PRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREI 254 (316)
T ss_pred --------CccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCC
Confidence 124677899999999999999999996 89999999763
No 120
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.9e-45 Score=346.71 Aligned_cols=283 Identities=44% Similarity=0.744 Sum_probs=228.6
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC---hHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE---PESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~ 193 (406)
+|++.+.||+|+||.||+|.+..+|+.||+|.++..... ......+..|+++++.++|+||+++++++.+ ....+
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~ 78 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH--KSNIN 78 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec--CCEEE
Confidence 488899999999999999998889999999999765433 3334456679999999999999999999987 45699
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
+||||+.+++...+......+++..++.++.||+.||.|||+.|++|+||+|+|||++.++.++|+|||++........
T Consensus 79 lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~- 157 (298)
T cd07841 79 LVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNR- 157 (298)
T ss_pred EEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCc-
Confidence 9999996677666655444799999999999999999999999999999999999999999999999999987654322
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcC-CCCcc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK-LPNAT 352 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~ 352 (406)
......+++.|+|||.+.+...++.++|+|||||++|+|++|.+||.+.+..+.+.++....+.+....|.... .+...
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (298)
T cd07841 158 KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYV 237 (298)
T ss_pred cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccc
Confidence 22334568899999988665568899999999999999999999999988888888888877777665554321 11111
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.... .............+..+.+||.+||++||.+|||+.++|.|+||..
T Consensus 238 ~~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~ 287 (298)
T cd07841 238 EFKP--FPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSN 287 (298)
T ss_pred cccc--cCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccC
Confidence 1110 0111122334566788999999999999999999999999999985
No 121
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.2e-45 Score=347.93 Aligned_cols=287 Identities=46% Similarity=0.737 Sum_probs=226.9
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecC------
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRM------ 188 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~------ 188 (406)
.++|++.+.||+|+||.||+|++..+++.||||.+............+.+|+.++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 47899999999999999999999999999999998755433333344567999999999999999999886532
Q ss_pred CceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccC
Q 015455 189 SCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD 268 (406)
Q Consensus 189 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~ 268 (406)
....+++|||+.+++...+......+++..++.++.||+.||.|||+.|++|+||||+||+++.++.+||+|||++....
T Consensus 91 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 170 (310)
T cd07865 91 KGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFS 170 (310)
T ss_pred CceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCccccc
Confidence 24579999999998888877766689999999999999999999999999999999999999999999999999998764
Q ss_pred CCCCC---CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhh
Q 015455 269 PNHKH---PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK 345 (406)
Q Consensus 269 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 345 (406)
..... ......++..|+|||++.+...++.++||||||+++|+|++|++||.+.+.......+....+..+...+..
T Consensus 171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (310)
T cd07865 171 LSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPG 250 (310)
T ss_pred CCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence 33221 123346788999999887655578899999999999999999999999888888888888877766654433
Q ss_pred cCCCCc-c-cCCCCCchhhhhhhhc--CCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 346 SKLPNA-T-LFKPREPYKRCIQETF--KDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 346 ~~~~~~-~-~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
...... . ...+.... ....... ...++.+.+||.+||..||.+|||++++|+||||
T Consensus 251 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 251 VDKLELFKKMELPQGQK-RKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred ccchhhhhhccCCCccc-hhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 211100 0 00011110 1111111 1235678899999999999999999999999998
No 122
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.6e-45 Score=346.76 Aligned_cols=286 Identities=41% Similarity=0.703 Sum_probs=226.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCC-CCCeeeEeeeeeecCC---ce
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD-HPNVIKLEGLVTSRMS---CS 191 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~l~~~~~~~~~---~~ 191 (406)
++|++.+.||+|+||.||+|++..+++.||+|.+............+.+|+.+++.+. ||||+++++++..... ..
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 4699999999999999999999899999999998765433333456778999999995 6999999998865322 34
Q ss_pred EEEEEecccccHHHHhcCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcC-CCcEEEeeeccccc
Q 015455 192 LYLVFHYMEHDLAGLAASP----EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD-DGVLKIADFGLASF 266 (406)
Q Consensus 192 ~~lv~e~~~~~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~-~~~~kl~DFgla~~ 266 (406)
.|++|||+++++...+... ...+++..++.++.||+.||.|||+.||+||||||+||+++. ++.+||+|||++..
T Consensus 81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeeccccee
Confidence 7999999999887765432 346899999999999999999999999999999999999998 88999999999986
Q ss_pred cCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhc
Q 015455 267 FDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS 346 (406)
Q Consensus 267 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 346 (406)
+..... ......+++.|+|||++.+...++.++||||||+++|+|++|.+||.+.+..+...++.+..+.+....|...
T Consensus 161 ~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T cd07837 161 FSIPVK-SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGV 239 (295)
T ss_pred cCCCcc-ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcch
Confidence 543221 1233456889999998876555889999999999999999999999999988888888888777766554321
Q ss_pred CCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccc
Q 015455 347 KLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSY 403 (406)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~ 403 (406)
.........+ ......+....+.+++.+.+||.+||..||.+|||+.++|.||||+
T Consensus 240 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 240 SKLRDWHEFP-QWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred hhccchhhcC-cccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 1100000000 0011122333456889999999999999999999999999999995
No 123
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=5.5e-46 Score=359.13 Aligned_cols=257 Identities=28% Similarity=0.392 Sum_probs=205.4
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
.++|+.++.||+|+||.||+|++..+|+.||||++.... .......+.+|+++++.++|+||+++++++.. ...+++
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~l 149 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDH--NGEIQV 149 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEecc--CCeEEE
Confidence 467999999999999999999998999999999986543 33445678899999999999999999999876 456999
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
+|||+.++.+.. ....++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+.... ..
T Consensus 150 v~e~~~~~~L~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~~ 224 (353)
T PLN00034 150 LLEFMDGGSLEG----THIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM-DP 224 (353)
T ss_pred EEecCCCCcccc----cccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccc-cc
Confidence 999999865532 2245788889999999999999999999999999999999999999999999998764322 12
Q ss_pred CcCccccCcccccccccCC----ccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 275 MTSRVVTLWYRPPELLLGA----TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~----~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
.....||..|+|||++... ...+.++|||||||++|||++|+.||......+....+........
T Consensus 225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----------- 293 (353)
T PLN00034 225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQP----------- 293 (353)
T ss_pred ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCC-----------
Confidence 3446789999999987431 2245689999999999999999999985433222222211100000
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
......+++++.+||..||+.||++|||+.|+|+||||..
T Consensus 294 --------------~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~ 333 (353)
T PLN00034 294 --------------PEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILR 333 (353)
T ss_pred --------------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCccccc
Confidence 0111356788999999999999999999999999999974
No 124
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=7.7e-46 Score=371.98 Aligned_cols=262 Identities=24% Similarity=0.343 Sum_probs=217.9
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCC-----
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMS----- 189 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~----- 189 (406)
.++|++.+.||+|+||+||+|++..+|+.||||++............+.+|+.++..++|+|++++++.+.....
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~ 110 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPEN 110 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCccc
Confidence 378999999999999999999999999999999998776666667778899999999999999999887753221
Q ss_pred -ceEEEEEeccccc-HHHHhc---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccc
Q 015455 190 -CSLYLVFHYMEHD-LAGLAA---SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA 264 (406)
Q Consensus 190 -~~~~lv~e~~~~~-l~~~~~---~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla 264 (406)
..+++||||+.++ |...+. .....+++..+..++.|++.||.|||+.+|+||||||+|||++.++.+||+|||++
T Consensus 111 ~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls 190 (496)
T PTZ00283 111 VLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFS 190 (496)
T ss_pred ceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccC
Confidence 2478999999875 444432 23457999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCC-CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHh
Q 015455 265 SFFDPNHKH-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYW 343 (406)
Q Consensus 265 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 343 (406)
+.+...... .....+||+.|+|||++.+.. ++.++|||||||++|||++|+.||.+.+..+.+..+......
T Consensus 191 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~-~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~------ 263 (496)
T PTZ00283 191 KMYAATVSDDVGRTFCGTPYYVAPEIWRRKP-YSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYD------ 263 (496)
T ss_pred eeccccccccccccccCCcceeCHHHhCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCC------
Confidence 876433221 234467899999999987754 899999999999999999999999988777666655432110
Q ss_pred hhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 344 KKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
...+.+++++.+||..||+.||.+|||+.++|+|||++.+
T Consensus 264 ----------------------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~ 303 (496)
T PTZ00283 264 ----------------------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLF 303 (496)
T ss_pred ----------------------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHh
Confidence 0113578889999999999999999999999999998753
No 125
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=5.9e-46 Score=356.25 Aligned_cols=289 Identities=35% Similarity=0.587 Sum_probs=232.2
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeec--CCceEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSR--MSCSLY 193 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~--~~~~~~ 193 (406)
++|++.+.||.|+||.||+|.+..+|+.||+|++............+.+|+.+++.++||||+++++++... ....+|
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 689999999999999999999999999999999876543334456677899999999999999999987642 345689
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
++|||+.+++...+.. ...+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||++.........
T Consensus 85 lv~e~~~~~l~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 163 (334)
T cd07855 85 VVMDLMESDLHHIIHS-DQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE 163 (334)
T ss_pred EEEehhhhhHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcC
Confidence 9999999877666544 446999999999999999999999999999999999999999999999999999766432221
Q ss_pred ---CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 274 ---PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 274 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
......++..|+|||.+.+...++.++|||||||++|+|++|++||.+.+....+..+....+.++...+.......
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 243 (334)
T cd07855 164 HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDR 243 (334)
T ss_pred CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhh
Confidence 12345789999999998765558899999999999999999999999999888999999988888766543322111
Q ss_pred cccC--CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 351 ATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 351 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
.... .........+....+..++++.++|++||+.||.+|||+.++|.||||.++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~ 300 (334)
T cd07855 244 VRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQY 300 (334)
T ss_pred HHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhc
Confidence 0000 000000011233345678999999999999999999999999999999753
No 126
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-47 Score=353.30 Aligned_cols=265 Identities=27% Similarity=0.415 Sum_probs=221.6
Q ss_pred CCcccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC-hHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCC
Q 015455 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-PESVKFMAREILILRRLDHPNVIKLEGLVTSRMS 189 (406)
Q Consensus 111 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~ 189 (406)
.+...+.|+..++||+||||.||-++...+|+.||+|.+.+..+. .......++|..||..++.+.||.+-..|+..
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTk-- 257 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETK-- 257 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCC--
Confidence 456678999999999999999999999999999999998765542 22233456799999999999999997666664
Q ss_pred ceEEEEEecccccHHHHhcCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeecccccc
Q 015455 190 CSLYLVFHYMEHDLAGLAASPEV--KFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF 267 (406)
Q Consensus 190 ~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~ 267 (406)
..+++|+..|+|+.+.+++.+-+ .|++..++.++.+|+.||++||+.+||+||+||+|||+|+.|+++|+|+|||..+
T Consensus 258 d~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei 337 (591)
T KOG0986|consen 258 DALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEI 337 (591)
T ss_pred CceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEec
Confidence 45999999999998887766544 8999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcC
Q 015455 268 DPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347 (406)
Q Consensus 268 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 347 (406)
..+.. ....+||.+|||||++.+.. |+...|||||||++|||+.|+.||....+...-..+-+.....+.
T Consensus 338 ~~g~~--~~~rvGT~GYMAPEvl~ne~-Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~------- 407 (591)
T KOG0986|consen 338 PEGKP--IRGRVGTVGYMAPEVLQNEV-YDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPE------- 407 (591)
T ss_pred CCCCc--cccccCcccccCHHHHcCCc-ccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchh-------
Confidence 66554 46669999999999998766 999999999999999999999999876544333333222111111
Q ss_pred CCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCc-----CHHHHhcCcccccc
Q 015455 348 LPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERL-----TATVALNSEVSYQF 405 (406)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----ta~elL~h~~f~~~ 405 (406)
+....+|+++++|.+.+|.+||.+|. ++.++-+||||+.+
T Consensus 408 ------------------ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~l 452 (591)
T KOG0986|consen 408 ------------------EYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDL 452 (591)
T ss_pred ------------------hcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccC
Confidence 11137899999999999999999997 47899999999864
No 127
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.9e-45 Score=344.09 Aligned_cols=281 Identities=42% Similarity=0.782 Sum_probs=227.1
Q ss_pred cceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEe
Q 015455 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFH 197 (406)
Q Consensus 118 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e 197 (406)
|++.+.||.|++|.||+|.+..+|+.||+|++............+.+|+++++.++|||++++++++.+. ...|++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~--~~~~iv~e 78 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSE--NKLYLVFE 78 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccC--CeEEEEEe
Confidence 6788999999999999999989999999999976654444445677899999999999999999998764 56999999
Q ss_pred cccccHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCc
Q 015455 198 YMEHDLAGLAASPE-VKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMT 276 (406)
Q Consensus 198 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~ 276 (406)
|+++++...+.... ..+++..++.++.|++.||+|||+.+++|+||+|+||+++.++.++|+|||++......... ..
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~ 157 (283)
T cd07835 79 FLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT-YT 157 (283)
T ss_pred ccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc-cC
Confidence 99887777654433 47899999999999999999999999999999999999999999999999999765433221 23
Q ss_pred CccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcC-CCCcccCC
Q 015455 277 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK-LPNATLFK 355 (406)
Q Consensus 277 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~ 355 (406)
...+++.|+|||++.+...++.++|+||||+++|+|++|++||.+.+....+.++.+..+.+....|.... .++.....
T Consensus 158 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd07835 158 HEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTF 237 (283)
T ss_pred ccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhc
Confidence 34568899999988765557889999999999999999999999998888888888888777766553321 11111000
Q ss_pred CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 356 PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
+. ..........+.+++.+.++|.+||+.||.+|||+.+++.||||
T Consensus 238 ~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 238 PK-WARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred cc-ccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 00 01112233345788899999999999999999999999999998
No 128
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=4.2e-45 Score=342.34 Aligned_cols=285 Identities=34% Similarity=0.632 Sum_probs=232.0
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.+.||+|+||.||+|.+..+++.||+|.++...........+.+|+++++.++|+||+++++++.. ....+++
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~iv 78 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR--KGRLYLV 78 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE--CCEEEEE
Confidence 36999999999999999999998899999999987654444556678889999999999999999999987 4569999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
|||++++++..+......+++..++.++.||+.||.|||+.+++|+||+|+||++++++.+||+|||++...........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (288)
T cd07833 79 FEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPL 158 (288)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccc
Confidence 99999998887766666799999999999999999999999999999999999999999999999999988765543334
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCC-CCcccC
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL-PNATLF 354 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~ 354 (406)
....++..|+|||++.+...++.++||||||+++|+|++|++||.+.+..+.+..+....+............ +.....
T Consensus 159 ~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07833 159 TDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGV 238 (288)
T ss_pred cCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccc
Confidence 5567899999999998764588999999999999999999999999888888888777777666543322111 000000
Q ss_pred C-CCCchhhhhhhhcC-CCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 355 K-PREPYKRCIQETFK-DFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 355 ~-~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
. +.......+....+ .+++.+.+||++||+.||++|||+.+++.||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 239 AFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred ccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 0 00000111122223 358899999999999999999999999999998
No 129
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.7e-46 Score=359.40 Aligned_cols=250 Identities=26% Similarity=0.384 Sum_probs=204.1
Q ss_pred eccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhC---CCCCeeeEeeeeeecCCceEEEEEecc
Q 015455 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRL---DHPNVIKLEGLVTSRMSCSLYLVFHYM 199 (406)
Q Consensus 124 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l---~h~~iv~l~~~~~~~~~~~~~lv~e~~ 199 (406)
||+|+||+||+|++..+++.||+|++..... ..........|..++..+ +||||+++++.+... ..+|+||||+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~--~~~~lv~e~~ 78 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTD--SDLYLVTDYM 78 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecC--CeEEEEEcCC
Confidence 7999999999999999999999999875432 222334455677777765 699999999988774 5699999999
Q ss_pred cccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCcc
Q 015455 200 EHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRV 279 (406)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~ 279 (406)
.++.+.........+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++....... ......+
T Consensus 79 ~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~ 157 (330)
T cd05586 79 SGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN-KTTNTFC 157 (330)
T ss_pred CCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-CCccCcc
Confidence 886665555556689999999999999999999999999999999999999999999999999997643222 1234567
Q ss_pred ccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCc
Q 015455 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREP 359 (406)
Q Consensus 280 gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (406)
||+.|+|||++.+...++.++|||||||++|+|++|..||.+.+..+....+...... ++.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~----------~~~--------- 218 (330)
T cd05586 158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVR----------FPK--------- 218 (330)
T ss_pred CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCC----------CCC---------
Confidence 8999999999876555899999999999999999999999988776666655431110 010
Q ss_pred hhhhhhhhcCCCCCChHHHHHHcccCCCCCCc----CHHHHhcCccccc
Q 015455 360 YKRCIQETFKDFPPSSLPLIETLLAIDPAERL----TATVALNSEVSYQ 404 (406)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp----ta~elL~h~~f~~ 404 (406)
..+++++.+||++||+.||.+|| ++.++++||||..
T Consensus 219 ---------~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~ 258 (330)
T cd05586 219 ---------NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFAD 258 (330)
T ss_pred ---------ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccC
Confidence 14678899999999999999998 7999999999975
No 130
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=9.5e-46 Score=354.51 Aligned_cols=263 Identities=23% Similarity=0.305 Sum_probs=212.5
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
++|++.+.||+|+||.||++++..+++.||+|++..... .......+..|+.++..++|+||+++++.+.+. ..+|+
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~~~l 78 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDE--NNLYL 78 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecC--CEEEE
Confidence 469999999999999999999999999999999864321 223344577899999999999999999988774 56999
Q ss_pred EEeccccc-HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 195 VFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 195 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
||||+.++ +...+......+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.........
T Consensus 79 v~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~ 158 (332)
T cd05623 79 VMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV 158 (332)
T ss_pred EEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcc
Confidence 99999865 55555554567999999999999999999999999999999999999999999999999999765433332
Q ss_pred CCcCccccCcccccccccC----CccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCC
Q 015455 274 PMTSRVVTLWYRPPELLLG----ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLP 349 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 349 (406)
.....+||+.|+|||++.+ ...++.++|||||||++|||++|+.||.+.+..+.+..+....... .
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~--------~-- 228 (332)
T cd05623 159 QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF--------Q-- 228 (332)
T ss_pred eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccc--------c--
Confidence 2334579999999998862 3348899999999999999999999999888777777665321100 0
Q ss_pred CcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCC--CcCHHHHhcCccccc
Q 015455 350 NATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAE--RLTATVALNSEVSYQ 404 (406)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpta~elL~h~~f~~ 404 (406)
.......+++++.+||++||..++.+ |+|+.++++||||..
T Consensus 229 --------------~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~ 271 (332)
T cd05623 229 --------------FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTG 271 (332)
T ss_pred --------------CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCC
Confidence 01111357889999999999765554 789999999999975
No 131
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=3.5e-46 Score=356.51 Aligned_cols=250 Identities=26% Similarity=0.348 Sum_probs=204.5
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHH-HHhhCCCCCeeeEeeeeeecCCceEEEEEecc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREIL-ILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYM 199 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~-~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~ 199 (406)
+.||+|+||+||+|++..+|+.||+|++..... .......+..|.. +++.++||||+++++++.. ...+|++|||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~--~~~~~lv~e~~ 78 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT--TEKLYFVLDFV 78 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEec--CCEEEEEEcCC
Confidence 369999999999999999999999999875422 2223344555655 4677899999999988877 45699999999
Q ss_pred cccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCcc
Q 015455 200 EHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRV 279 (406)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~ 279 (406)
.++.+.........+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++..... ........
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~~~~~ 157 (325)
T cd05604 79 NGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ-SDTTTTFC 157 (325)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC-CCCccccc
Confidence 98766655556668999999999999999999999999999999999999999999999999998754222 12234567
Q ss_pred ccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCc
Q 015455 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREP 359 (406)
Q Consensus 280 gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (406)
||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+..+....+.....
T Consensus 158 gt~~y~aPE~~~~~~-~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~----------------------- 213 (325)
T cd05604 158 GTPEYLAPEVIRKQP-YDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPL----------------------- 213 (325)
T ss_pred CChhhCCHHHHcCCC-CCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCc-----------------------
Confidence 899999999987754 89999999999999999999999998887776666543100
Q ss_pred hhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCH----HHHhcCccccc
Q 015455 360 YKRCIQETFKDFPPSSLPLIETLLAIDPAERLTA----TVALNSEVSYQ 404 (406)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta----~elL~h~~f~~ 404 (406)
...+..+..+.++|++||+.||.+||++ .++++||||..
T Consensus 214 ------~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~ 256 (325)
T cd05604 214 ------VLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFES 256 (325)
T ss_pred ------cCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCC
Confidence 0113567789999999999999999976 59999999985
No 132
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.4e-45 Score=365.23 Aligned_cols=277 Identities=23% Similarity=0.282 Sum_probs=209.2
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
...|.+.+.||+|+||.||+|.+..+++.||||.... ..+.+|+++|++++|+|||++++++.. ....++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~l~~~~~~--~~~~~l 237 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLALLDVRVV--GGLTCL 237 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCcEEEEEEE--CCEEEE
Confidence 3579999999999999999999999999999996432 234579999999999999999998877 356899
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC-
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH- 273 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~- 273 (406)
+|+++.+++...+......+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++........
T Consensus 238 v~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~ 317 (461)
T PHA03211 238 VLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTP 317 (461)
T ss_pred EEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccc
Confidence 9999999888887766668999999999999999999999999999999999999999999999999999876433222
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCC-------hHHHHHHHHHHhCCCCHHH----
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRT-------EVEQLHKIYKLCGSPSEEY---- 342 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~-------~~~~~~~i~~~~~~~~~~~---- 342 (406)
......||+.|+|||++.+.. ++.++|||||||++|||++|..++.... ....+.++.+.........
T Consensus 318 ~~~~~~GT~~Y~APE~~~~~~-~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~ 396 (461)
T PHA03211 318 FHYGIAGTVDTNAPEVLAGDP-YTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHA 396 (461)
T ss_pred cccccCCCcCCcCHHHHcCCC-CCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCc
Confidence 123457899999999998754 8999999999999999999876543221 1233444444322211100
Q ss_pred ----hhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 343 ----WKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 343 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.......... .............+..++.++.+||.+||+.||.+|||+.|+|+||||++
T Consensus 397 ~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 397 GSRLVSQYRHRAAR--NRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred chHHHHHHHhhhhc--ccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 0000000000 00000000001112246778999999999999999999999999999985
No 133
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=9.3e-45 Score=341.00 Aligned_cols=283 Identities=37% Similarity=0.626 Sum_probs=220.1
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|.+.+.||+|+||.||+|.+..+|+.||+|.+...... .....+.+|+.+++.++|+||+++++++.. ....|++
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~--~~~~~lv 81 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE-GVPFTAIREASLLKGLKHANIVLLHDIIHT--KETLTFV 81 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC-CCcHHHHHHHHHHHhcCCCCEeEEEEEEec--CCeEEEE
Confidence 6899999999999999999999899999999998754322 222345679999999999999999999876 4568999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
|||+.++++..+......+++..++.++.|++.||.|||+.||+|+||||+|||++.++.++|+|||+++...... ...
T Consensus 82 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~ 160 (291)
T cd07870 82 FEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS-QTY 160 (291)
T ss_pred EecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCC-CCC
Confidence 9999998888776666678999999999999999999999999999999999999999999999999997653222 122
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCCHHHhhhcC-CCCccc
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTE-VEQLHKIYKLCGSPSEEYWKKSK-LPNATL 353 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~ 353 (406)
....+++.|+|||++.+...++.++|||||||++|+|++|..||.+.+. .+.+..+....+.+....+.... .+....
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (291)
T cd07870 161 SSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKP 240 (291)
T ss_pred CCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccc
Confidence 3445789999999987655578899999999999999999999976553 45666666667766655433211 111000
Q ss_pred CCCCCchhhhhhhhcC--CCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 354 FKPREPYKRCIQETFK--DFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~--~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
..............+. ..++.+.++|.+||..||++|||+.++|.||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 241 EWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred hhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 0000000011111111 235678999999999999999999999999998
No 134
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.1e-45 Score=351.04 Aligned_cols=282 Identities=24% Similarity=0.333 Sum_probs=211.2
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.+.||+|+||.||++++..++..+|+|.+.... .......+.+|+++++.++||||+++++++... ..++++
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv 81 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD--GEISIC 81 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC--CEEEEE
Confidence 78999999999999999999999999999999987643 344556788999999999999999999999874 569999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN-GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
|||+.++.+..+......+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++.......
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--- 158 (333)
T cd06650 82 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--- 158 (333)
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc---
Confidence 99998765554444455789999999999999999999985 79999999999999999999999999997653322
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH-HhCCCCHHHhhhcCCCCc--
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYK-LCGSPSEEYWKKSKLPNA-- 351 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~-- 351 (406)
.....|+..|+|||++.+.. ++.++|||||||++|+|++|+.||......+....+.. ..+.+..........+..
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (333)
T cd06650 159 ANSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRP 237 (333)
T ss_pred cccCCCCccccCHHHhcCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccch
Confidence 23457899999999987654 88999999999999999999999987665433221110 011111000000000000
Q ss_pred -----ccCCCCCchhhhh----hhhc-----CCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 352 -----TLFKPREPYKRCI----QETF-----KDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 352 -----~~~~~~~~~~~~~----~~~~-----~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
....+........ .... ..+++++.+||.+||++||++|||+.++|.||||+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~ 304 (333)
T cd06650 238 LSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 304 (333)
T ss_pred hhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhc
Confidence 0000000000000 0000 124567899999999999999999999999999975
No 135
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2.5e-45 Score=352.39 Aligned_cols=288 Identities=37% Similarity=0.572 Sum_probs=230.6
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecC---CceE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRM---SCSL 192 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~---~~~~ 192 (406)
++|++.+.||+|+||+||+|++..+++.||||.+............+.+|+.+++.++|+||+++++++.... ....
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 84 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV 84 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence 5799999999999999999999999999999998754333334456678999999999999999999876432 2458
Q ss_pred EEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC
Q 015455 193 YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK 272 (406)
Q Consensus 193 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~ 272 (406)
|+++||+++++...+.. ...+++..+..++.|++.||.|||+.+++||||||+||+++.++.+||+|||++.......
T Consensus 85 ~lv~e~~~~~L~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~- 162 (337)
T cd07858 85 YIVYELMDTDLHQIIRS-SQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG- 162 (337)
T ss_pred EEEEeCCCCCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCc-
Confidence 99999999888776654 3579999999999999999999999999999999999999999999999999998764332
Q ss_pred CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 273 HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 273 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
.......++..|+|||.+.+...++.++|||||||++|+|++|++||.+.+.......+....+.+..+.+.....+...
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (337)
T cd07858 163 DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKAR 242 (337)
T ss_pred ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhh
Confidence 22344567899999998875445889999999999999999999999999888888888888887776554221111110
Q ss_pred cCC--CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 353 LFK--PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 353 ~~~--~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
... .............+.+++.+.+||++||+.||++|||+.++|+||||..+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 243 RYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred HHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 000 00000011123345788999999999999999999999999999999764
No 136
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=7.8e-46 Score=354.08 Aligned_cols=250 Identities=26% Similarity=0.356 Sum_probs=204.2
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHH-HHhhCCCCCeeeEeeeeeecCCceEEEEEecc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREIL-ILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYM 199 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~-~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~ 199 (406)
+.||+|+||+||+|++..+++.||+|++..... .......+..|.. +++.++||||+++++++... ..+|++|||+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~--~~~~lv~e~~ 78 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA--DKLYFVLDYI 78 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcC--CeEEEEEeCC
Confidence 369999999999999999999999999975432 1122233344444 56788999999999988774 5699999999
Q ss_pred cccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCcc
Q 015455 200 EHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRV 279 (406)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~ 279 (406)
.++.+.........+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++...... ......+
T Consensus 79 ~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~-~~~~~~~ 157 (325)
T cd05602 79 NGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-GTTSTFC 157 (325)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCC-CCccccc
Confidence 987666555556678999999999999999999999999999999999999999999999999997543221 2234567
Q ss_pred ccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCc
Q 015455 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREP 359 (406)
Q Consensus 280 gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (406)
||+.|+|||++.+.. ++.++|||||||++|+|++|.+||.+.+..+.+..+.....
T Consensus 158 gt~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~----------------------- 213 (325)
T cd05602 158 GTPEYLAPEVLHKQP-YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL----------------------- 213 (325)
T ss_pred CCccccCHHHHcCCC-CCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCc-----------------------
Confidence 999999999987754 89999999999999999999999998887777666644210
Q ss_pred hhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHH----HHhcCccccc
Q 015455 360 YKRCIQETFKDFPPSSLPLIETLLAIDPAERLTAT----VALNSEVSYQ 404 (406)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~----elL~h~~f~~ 404 (406)
...+.+++.+.++|.+||+.||.+|+++. ++++|+||..
T Consensus 214 ------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~ 256 (325)
T cd05602 214 ------QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSP 256 (325)
T ss_pred ------CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCC
Confidence 01136788899999999999999999876 8999999964
No 137
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=4.1e-46 Score=343.68 Aligned_cols=259 Identities=31% Similarity=0.469 Sum_probs=211.4
Q ss_pred cceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEe
Q 015455 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFH 197 (406)
Q Consensus 118 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e 197 (406)
|++.+.||+|+||+||++++..+++.||+|.+..............+|+.++++++||||+++++++.. ....+++||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~~~~v~~ 78 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD--DNYLYIVME 78 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE--SSEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc--ccccccccc
Confidence 788999999999999999999999999999998776544444445569999999999999999999988 456899999
Q ss_pred cccc-cHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCc
Q 015455 198 YMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMT 276 (406)
Q Consensus 198 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~ 276 (406)
++.+ ++...+. ....+++..+..++.||+.||.+||+.|++|+||||+||+++.++.++|+|||++.... .......
T Consensus 79 ~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-~~~~~~~ 156 (260)
T PF00069_consen 79 YCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS-ENNENFN 156 (260)
T ss_dssp EETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEEST-STTSEBS
T ss_pred cccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccc
Confidence 9999 5555554 55578999999999999999999999999999999999999999999999999998642 2222345
Q ss_pred CccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCC
Q 015455 277 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKP 356 (406)
Q Consensus 277 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (406)
...++..|+|||++.....++.++||||+|+++|+|++|..||...........+.+...........
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 224 (260)
T PF00069_consen 157 PFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQ------------ 224 (260)
T ss_dssp SSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTT------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccccc------------
Confidence 56789999999998733458999999999999999999999999885555544444433222111000
Q ss_pred CCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 357 REPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
.....++.+.++|..||+.||++|||+.++++||||
T Consensus 225 ----------~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 225 ----------QSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp ----------SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred ----------ccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 001123679999999999999999999999999998
No 138
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.2e-45 Score=353.67 Aligned_cols=263 Identities=24% Similarity=0.298 Sum_probs=212.6
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCC-CChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDN-LEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
++|++.+.||+|+||.||++++..+++.||+|++.... ........+.+|+.++..++|+||+++++++.. ....|+
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~--~~~~~l 78 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQD--ENYLYL 78 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc--CCEEEE
Confidence 47999999999999999999999999999999987532 223344557789999999999999999998877 456999
Q ss_pred EEecccccHH-HHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 195 VFHYMEHDLA-GLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 195 v~e~~~~~l~-~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
||||+.++.+ .++......+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 79 v~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 158 (331)
T cd05624 79 VMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV 158 (331)
T ss_pred EEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCce
Confidence 9999987544 444444568999999999999999999999999999999999999999999999999999876544332
Q ss_pred CCcCccccCcccccccccCC----ccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCC
Q 015455 274 PMTSRVVTLWYRPPELLLGA----TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLP 349 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~----~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 349 (406)
......||+.|+|||++.+. ..++.++|||||||++|+|++|+.||.+.+..+....+........
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~---------- 228 (331)
T cd05624 159 QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ---------- 228 (331)
T ss_pred eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCccc----------
Confidence 23345789999999988642 2478899999999999999999999998877776666543211000
Q ss_pred CcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCC--CcCHHHHhcCccccc
Q 015455 350 NATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAE--RLTATVALNSEVSYQ 404 (406)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpta~elL~h~~f~~ 404 (406)
.......+++++.+||.+||..++.+ |++++++++||||+.
T Consensus 229 --------------~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~ 271 (331)
T cd05624 229 --------------FPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEG 271 (331)
T ss_pred --------------CCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCC
Confidence 01112356888999999999976655 579999999999975
No 139
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-47 Score=384.44 Aligned_cols=262 Identities=28% Similarity=0.355 Sum_probs=227.2
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCC-CChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDN-LEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~ 193 (406)
.++|++++.||+|+||.|.+++++.+++.||+|++.+-. +.......|..|..+|..-+.+.|++++..|.+ ..++|
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD--~~~LY 151 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD--ERYLY 151 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC--ccceE
Confidence 379999999999999999999999999999999987632 245556789999999999999999999888877 56799
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
+|||||+||.+-.+..+..++|++.++.|+..|+.||.-||+.|+|||||||+|||||..|++||+|||.|-.++.+..-
T Consensus 152 lVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V 231 (1317)
T KOG0612|consen 152 LVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTV 231 (1317)
T ss_pred EEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcE
Confidence 99999998655444444449999999999999999999999999999999999999999999999999999998877666
Q ss_pred CCcCccccCccccccccc----CCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCC
Q 015455 274 PMTSRVVTLWYRPPELLL----GATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLP 349 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~----~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 349 (406)
.....+|||.|++||++. +...|++..||||+||++|||+.|..||...+-.+.+.+|+.... ...+|
T Consensus 232 ~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~--------~l~FP 303 (1317)
T KOG0612|consen 232 RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKE--------SLSFP 303 (1317)
T ss_pred EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhh--------hcCCC
Confidence 667789999999999984 224599999999999999999999999999999999999987521 11222
Q ss_pred CcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcC---HHHHhcCccccc
Q 015455 350 NATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT---ATVALNSEVSYQ 404 (406)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---a~elL~h~~f~~ 404 (406)
+ ...+|+++++||++++. +|..|.. ++++-.||||..
T Consensus 304 ~-----------------~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g 343 (1317)
T KOG0612|consen 304 D-----------------ETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEG 343 (1317)
T ss_pred c-----------------ccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccC
Confidence 1 12589999999999998 7999998 999999999974
No 140
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-44 Score=354.58 Aligned_cols=276 Identities=22% Similarity=0.280 Sum_probs=212.9
Q ss_pred CCcceeeeeccCCceEEEEEEEc--cCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDM--LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~ 193 (406)
.+|++++.||+|+||.||+|... .++..||+|.+.... ...+|+++|+.++|||||++++++... ..++
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~-------~~~~E~~il~~l~h~~iv~~~~~~~~~--~~~~ 162 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK-------TPGREIDILKTISHRAIINLIHAYRWK--STVC 162 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc-------cHHHHHHHHHhcCCCCccceeeeEeeC--CEEE
Confidence 57999999999999999999754 346789999876432 245699999999999999999988764 4689
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
++||++.+++...+ .....+++..++.++.||+.||.|||+.||+||||||+|||++.++.++|+|||++.........
T Consensus 163 lv~e~~~~~l~~~l-~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~ 241 (392)
T PHA03207 163 MVMPKYKCDLFTYV-DRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDT 241 (392)
T ss_pred EEehhcCCCHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCccccc
Confidence 99999999888876 44568999999999999999999999999999999999999999999999999999876543322
Q ss_pred -CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHhCCCCHHHhhhcCCC
Q 015455 274 -PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRT---EVEQLHKIYKLCGSPSEEYWKKSKLP 349 (406)
Q Consensus 274 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~ 349 (406)
......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.+.. ....+..+.+.++..+.++.......
T Consensus 242 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~ 320 (392)
T PHA03207 242 PQCYGWSGTLETNSPELLALDP-YCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTN 320 (392)
T ss_pred ccccccccccCccCHhHhcCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchh
Confidence 123457899999999987654 8999999999999999999999997754 34566667666654443211100000
Q ss_pred ------Ccc-cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 350 ------NAT-LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 350 ------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
... ...+.......+ ....++.++.+||.+||..||++|||+.++|.||||.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~ 380 (392)
T PHA03207 321 LCKHFKQYAIVLRPPYTIPPVI--RKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTK 380 (392)
T ss_pred HHHHHHhhcccccCCccccchh--hccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhc
Confidence 000 000000000000 01245778999999999999999999999999999975
No 141
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1e-45 Score=352.63 Aligned_cols=250 Identities=25% Similarity=0.330 Sum_probs=202.5
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHH-HHhhCCCCCeeeEeeeeeecCCceEEEEEecc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREIL-ILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYM 199 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~-~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~ 199 (406)
+.||+|+||.||+|++..+|+.||+|++..... .......+..|.. +++.++||||+++++++.+. ...|+||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~--~~~~lv~e~~ 78 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTA--EKLYFVLDYV 78 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcC--CEEEEEEcCC
Confidence 369999999999999999999999999875432 2222334445554 57889999999999888764 4699999999
Q ss_pred cccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCcc
Q 015455 200 EHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRV 279 (406)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~ 279 (406)
+++.+.........+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++....... .......
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~ 157 (321)
T cd05603 79 NGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-ETTSTFC 157 (321)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-Ccccccc
Confidence 987665555556689999999999999999999999999999999999999999999999999987542221 2234567
Q ss_pred ccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCc
Q 015455 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREP 359 (406)
Q Consensus 280 gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (406)
||+.|+|||++.+.. ++.++|||||||++|||++|..||.+.+.......+.....
T Consensus 158 gt~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~----------------------- 213 (321)
T cd05603 158 GTPEYLAPEVLRKEP-YDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPL----------------------- 213 (321)
T ss_pred CCcccCCHHHhcCCC-CCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCC-----------------------
Confidence 899999999987644 89999999999999999999999998877666655543100
Q ss_pred hhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCH----HHHhcCccccc
Q 015455 360 YKRCIQETFKDFPPSSLPLIETLLAIDPAERLTA----TVALNSEVSYQ 404 (406)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta----~elL~h~~f~~ 404 (406)
...+..+..+.++|.+||+.||.+||++ .++++|+||..
T Consensus 214 ------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~ 256 (321)
T cd05603 214 ------QLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSP 256 (321)
T ss_pred ------CCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCC
Confidence 0112456779999999999999999875 59999999974
No 142
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=3.7e-45 Score=351.15 Aligned_cols=289 Identities=39% Similarity=0.631 Sum_probs=231.1
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCceEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~~~~ 193 (406)
.++|++.+.||+|+||.||+|.+..+|+.||+|++............+.+|+.++.++ +||||+++++++........|
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 3789999999999999999999888899999999865433333445567899999999 999999999998765566789
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
+||||+.+++...+... .+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||++.........
T Consensus 86 lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~ 163 (337)
T cd07852 86 LVFEYMETDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEEN 163 (337)
T ss_pred EEecccccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccccc
Confidence 99999998777766543 7889999999999999999999999999999999999999999999999999876433221
Q ss_pred ----CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCC
Q 015455 274 ----PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLP 349 (406)
Q Consensus 274 ----~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 349 (406)
......+++.|+|||++.+...++.++||||||+++|+|++|+.||.+....+....+....+.+....+.....+
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (337)
T cd07852 164 PENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSP 243 (337)
T ss_pred ccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhh
Confidence 2234568999999998876556889999999999999999999999999888888888888777765443322111
Q ss_pred Ccc--cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 350 NAT--LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 350 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
... .......-........+.++..+.++|.+||+.||.+|||+.++++||||+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~ 301 (337)
T cd07852 244 FAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF 301 (337)
T ss_pred hHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence 000 00000000111223345578899999999999999999999999999999864
No 143
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=7.8e-45 Score=364.16 Aligned_cols=256 Identities=23% Similarity=0.313 Sum_probs=212.2
Q ss_pred CCcceeeeeccCCceEEEEEEEccC-CcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLT-GKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
..|.+.+.||+|+||.||+|.+..+ +..||+|.+.... ......+.+|+.+|+.++|||||++++++... ..+|+
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~--~~~~l 142 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND--ERQAAYARSELHCLAACDHFGIVKHFDDFKSD--DKLLL 142 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEEC--CEEEE
Confidence 4599999999999999999988777 7889999775433 33445677899999999999999999999874 56999
Q ss_pred EEecccccHH-HHh---cCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 195 VFHYMEHDLA-GLA---ASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 195 v~e~~~~~l~-~~~---~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
||||+.++.+ ..+ ......+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.+...
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence 9999987544 333 233457899999999999999999999999999999999999999999999999999876533
Q ss_pred CC-CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCC
Q 015455 271 HK-HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLP 349 (406)
Q Consensus 271 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 349 (406)
.. ......+||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+..+......+
T Consensus 223 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~----------- 290 (478)
T PTZ00267 223 VSLDVASSFCGTPYYLAPELWERK-RYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDP----------- 290 (478)
T ss_pred cccccccccCCCccccCHhHhCCC-CCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-----------
Confidence 22 123456799999999988765 48999999999999999999999999888777666654421110
Q ss_pred CcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 350 NATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
....+++++.+||..||..||++|||+.++|.|+|++.
T Consensus 291 -----------------~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 291 -----------------FPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred -----------------CCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 01256788999999999999999999999999999864
No 144
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=8.6e-45 Score=344.92 Aligned_cols=286 Identities=38% Similarity=0.608 Sum_probs=221.9
Q ss_pred CcceeeeeccCCceEEEEEEEcc--CCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDML--TGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~ 193 (406)
.|++.+.||+|+||.||+|.+.. +++.||+|.+..... .......+.+|+.++..++||||+++++++.......++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 48899999999999999999887 789999999876331 122234567799999999999999999999886557799
Q ss_pred EEEecccccHHHHhcC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcC----CCcEEEeeecccc
Q 015455 194 LVFHYMEHDLAGLAAS----PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD----DGVLKIADFGLAS 265 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~----~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~----~~~~kl~DFgla~ 265 (406)
+||||+++++...+.. ....+++..++.++.||+.||.|||+.+|+||||||+|||++. ++.+||+|||++.
T Consensus 81 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~ 160 (316)
T cd07842 81 LLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLAR 160 (316)
T ss_pred EEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcccc
Confidence 9999999888775532 2237899999999999999999999999999999999999999 8999999999998
Q ss_pred ccCCCCC--CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChH---------HHHHHHHHH
Q 015455 266 FFDPNHK--HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEV---------EQLHKIYKL 334 (406)
Q Consensus 266 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~---------~~~~~i~~~ 334 (406)
....... .......+++.|+|||++.+...++.++|||||||++|+|++|++||.+.... ..+..+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (316)
T cd07842 161 LFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEV 240 (316)
T ss_pred ccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHH
Confidence 7643322 11233567899999998877656889999999999999999999999876543 356677777
Q ss_pred hCCCCHHHhhhcC-CCCccc---CCCCC----chhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 335 CGSPSEEYWKKSK-LPNATL---FKPRE----PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 335 ~~~~~~~~~~~~~-~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
++.+....+.... +++... ..... .......+.....+..+.++|.+||+.||++|||+.++++||||
T Consensus 241 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 241 LGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred hCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 7766655443211 111100 00000 00111112223677889999999999999999999999999998
No 145
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.8e-45 Score=350.54 Aligned_cols=252 Identities=23% Similarity=0.386 Sum_probs=202.4
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCceEEEEEecc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLYLVFHYM 199 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~ 199 (406)
+.||+|+||.||+|++..+++.||+|++..... .......+.+|+.++.++ +||||+++++++... ..+|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--~~~~lv~e~~ 78 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTT--SRLFLVIEYV 78 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeC--CEEEEEEeCC
Confidence 469999999999999999999999999986533 234456678899999888 699999999988774 5699999999
Q ss_pred cccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCcc
Q 015455 200 EHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRV 279 (406)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~ 279 (406)
+++.+.........+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... ......+
T Consensus 79 ~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~ 157 (327)
T cd05617 79 NGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG-DTTSTFC 157 (327)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCC-Cceeccc
Confidence 887665555555689999999999999999999999999999999999999999999999999997532221 1234567
Q ss_pred ccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTE------VEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 280 gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
||+.|+|||++.+.. ++.++|||||||++|+|++|+.||..... .+........ .+
T Consensus 158 gt~~y~aPE~~~~~~-~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~--------------- 219 (327)
T cd05617 158 GTPNYIAPEILRGEE-YGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE--KP--------------- 219 (327)
T ss_pred CCcccCCHHHHCCCC-CCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh--CC---------------
Confidence 899999999987654 89999999999999999999999964321 1111111110 00
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcC------HHHHhcCcccccc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT------ATVALNSEVSYQF 405 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------a~elL~h~~f~~~ 405 (406)
......+++.+.++|.+||+.||.+|++ ..++++||||+..
T Consensus 220 -----------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 220 -----------IRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred -----------CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence 0011256778999999999999999998 5799999999753
No 146
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=9.4e-45 Score=335.49 Aligned_cols=257 Identities=26% Similarity=0.427 Sum_probs=210.8
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC---hHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE---PESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~ 192 (406)
++|++.+.||+|++|.||.|.+..+++.||+|.+...... ......+.+|++++++++||||+++++++... ...
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~ 79 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDD--ETL 79 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccC--CeE
Confidence 4689999999999999999998889999999998755432 22345678899999999999999999999874 479
Q ss_pred EEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC
Q 015455 193 YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK 272 (406)
Q Consensus 193 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~ 272 (406)
++++||++++.+.........+++..++.++.|++.||.|||+.|++|+||+|+||++++++.++|+|||+++.......
T Consensus 80 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~ 159 (263)
T cd06625 80 SIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS 159 (263)
T ss_pred EEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccc
Confidence 99999998765554444455789999999999999999999999999999999999999999999999999986643322
Q ss_pred CCC--cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 273 HPM--TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 273 ~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
... ....++..|+|||++.+.. ++.++||||||+++|+|++|+.||...+.......+......
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~------------- 225 (263)
T cd06625 160 SGTGMKSVTGTPYWMSPEVISGEG-YGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN------------- 225 (263)
T ss_pred ccccccCCCcCccccCcceeccCC-CCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCC-------------
Confidence 211 3456788999999988755 889999999999999999999999876655444433221100
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
......+++.+.++|..||..||.+|||+.++|+|+||
T Consensus 226 --------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 226 --------------PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred --------------CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 01113577889999999999999999999999999997
No 147
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=6e-45 Score=341.55 Aligned_cols=259 Identities=27% Similarity=0.426 Sum_probs=207.0
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC-hHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-PESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
.|++.+.||+|+||.||++.+..+++.||+|.+...... ......+.+|+.+++.++|++++.+++.+... ...+++
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~--~~~~lv 78 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETK--DALCLV 78 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecC--CEEEEE
Confidence 378889999999999999999999999999998765432 22334567899999999999999999988764 469999
Q ss_pred EecccccHH-HHhc-CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 196 FHYMEHDLA-GLAA-SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 196 ~e~~~~~l~-~~~~-~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
|||+.++.+ ..+. .....+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++........
T Consensus 79 ~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~- 157 (285)
T cd05630 79 LTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT- 157 (285)
T ss_pred EEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc-
Confidence 999987544 4332 2334699999999999999999999999999999999999999999999999999976543322
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
.....|+..|+|||++.+.. ++.++|||||||++|+|++|+.||.+..................
T Consensus 158 -~~~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~-------------- 221 (285)
T cd05630 158 -IKGRVGTVGYMAPEVVKNER-YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQ-------------- 221 (285)
T ss_pred -ccCCCCCccccChHHHcCCC-CCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhh--------------
Confidence 23457899999999987654 89999999999999999999999987543221111111100000
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcC-----HHHHhcCcccccc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT-----ATVALNSEVSYQF 405 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----a~elL~h~~f~~~ 405 (406)
......+++++.+||.+||+.||.+||| +.++++||||+++
T Consensus 222 -----------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 222 -----------EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred -----------hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 0111357788999999999999999999 9999999999863
No 148
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=5.1e-45 Score=349.02 Aligned_cols=288 Identities=38% Similarity=0.603 Sum_probs=235.0
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecC---CceEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRM---SCSLY 193 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~---~~~~~ 193 (406)
+|++.+.||+|+||.||+|++..+++.||+|.+............+.+|+.+++.++|+||+++++++.... ...+|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 488999999999999999998888999999998765433445567888999999999999999999887643 23689
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC-
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK- 272 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~- 272 (406)
++|+|+++++...+... ..+++..++.++.||+.||+|||+.||+|+||||+|||++.++.++|+|||++........
T Consensus 81 lv~e~~~~~l~~~l~~~-~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~ 159 (330)
T cd07834 81 IVTELMETDLHKVIKSP-QPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE 159 (330)
T ss_pred EEecchhhhHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccc
Confidence 99999998777666543 4899999999999999999999999999999999999999999999999999987654321
Q ss_pred -CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCc
Q 015455 273 -HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351 (406)
Q Consensus 273 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 351 (406)
.......+++.|+|||++.+...++.++|+||||+++|+|++|++||.+.+..+.+..+....+.++.+.+........
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 239 (330)
T cd07834 160 KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKA 239 (330)
T ss_pred cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccch
Confidence 1234456799999999998764689999999999999999999999999999999999999888888765543221111
Q ss_pred ccC--CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 352 TLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 352 ~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
... .........+....+.+++.+.+||..||++||.+|||+.++|+||||+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 295 (330)
T cd07834 240 RNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQL 295 (330)
T ss_pred hhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhh
Confidence 110 011111122333445688899999999999999999999999999999864
No 149
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6.1e-45 Score=378.12 Aligned_cols=261 Identities=29% Similarity=0.445 Sum_probs=213.4
Q ss_pred ccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEE
Q 015455 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 114 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~ 193 (406)
..++|++++.||+|+||+||+|++..++..||+|.+............+..|+.++..++|||||+++++|.......+|
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 34789999999999999999999999999999999987666666667788999999999999999999998776667899
Q ss_pred EEEeccccc-HHHHhcC---CCCCCCHHHHHHHHHHHHHHHHHHHHC-------CCeeccCCCCCeEEcC----------
Q 015455 194 LVFHYMEHD-LAGLAAS---PEVKFTEPQVKCYMHQLLSGLEHCHNN-------GVLHRDIKGSNLLIDD---------- 252 (406)
Q Consensus 194 lv~e~~~~~-l~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~-------~ivHrDlkp~NIll~~---------- 252 (406)
+||||+.++ |...+.. ....+++..++.|+.||+.||.|||+. +||||||||+||||+.
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 999999874 4444432 235799999999999999999999995 4999999999999964
Q ss_pred -------CCcEEEeeeccccccCCCCCCCCcCccccCcccccccccCC-ccCCCccchHHHHHHHHHHHhCCCCCCCCCh
Q 015455 253 -------DGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAGKPIMPGRTE 324 (406)
Q Consensus 253 -------~~~~kl~DFgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwslGv~l~ell~g~~pf~~~~~ 324 (406)
.+.+||+|||++..+..... .....||+.|+|||++.+. ..++.++|||||||+||+|++|..||...+.
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~s~--~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~ 248 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIESM--AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN 248 (1021)
T ss_pred cccccCCCCceEEccCCcccccccccc--ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence 23589999999987643322 3455789999999998642 3478999999999999999999999987665
Q ss_pred HHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 325 VEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 325 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
...+....... +. + .....++++.+||..||+.||.+|||+.++|.|+||+.
T Consensus 249 ~~qli~~lk~~--p~--------l------------------pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~ 300 (1021)
T PTZ00266 249 FSQLISELKRG--PD--------L------------------PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKN 300 (1021)
T ss_pred HHHHHHHHhcC--CC--------C------------------CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhh
Confidence 54433332210 00 0 01245778999999999999999999999999999974
No 150
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.8e-44 Score=331.16 Aligned_cols=255 Identities=24% Similarity=0.381 Sum_probs=211.2
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~ 196 (406)
.|++.+.||+|++|.||++.+..+++.||+|.+..........+.+.+|++++++++|+|++++++.+... ...+|++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGE-DGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCC-CCEEEEEe
Confidence 48999999999999999999988999999999976655555566788899999999999999998877543 44689999
Q ss_pred eccccc-HHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 197 HYMEHD-LAGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 197 e~~~~~-l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
||++++ +.+.+.. ....+++.+++.++.|++.||++||+.|++|+||||+||+++.++.++|+|||++........ .
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~-~ 158 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD-M 158 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCC-c
Confidence 999875 4444433 345689999999999999999999999999999999999999999999999999987643322 2
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
.....+++.|+|||++.+.. ++.++||||||+++|+|++|+.||...+.......+......
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~----------------- 220 (257)
T cd08223 159 ASTLIGTPYYMSPELFSNKP-YNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLP----------------- 220 (257)
T ss_pred cccccCCcCccChhHhcCCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC-----------------
Confidence 34456899999999987654 889999999999999999999999887765554444331100
Q ss_pred CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
.....+++.+.+||.+||+.||.+|||+.++++||||
T Consensus 221 -----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 221 -----------PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred -----------CCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0112567889999999999999999999999999997
No 151
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=9.2e-45 Score=338.86 Aligned_cols=253 Identities=25% Similarity=0.358 Sum_probs=199.6
Q ss_pred eccCCceEEEEEEEccCCcEEEEEEEecCCCCh-HHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEeccccc
Q 015455 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEP-ESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD 202 (406)
Q Consensus 124 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~~ 202 (406)
||+|+||.||++++..+|+.||+|.+....... ........|+++++.++||||+++++++.. ....|++|||+.++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~--~~~~~lv~e~~~g~ 78 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFES--KTHLCLVMSLMNGG 78 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEec--CCeEEEEEecCCCC
Confidence 799999999999999999999999987543321 223345569999999999999999998876 45699999999875
Q ss_pred HHH-Hhc-CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCccc
Q 015455 203 LAG-LAA-SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280 (406)
Q Consensus 203 l~~-~~~-~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~g 280 (406)
.+. ... .....+++..+..++.||+.||+|||+.||+||||||+|||++.++.++|+|||++........ .....|
T Consensus 79 ~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~--~~~~~~ 156 (277)
T cd05607 79 DLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT--ITQRAG 156 (277)
T ss_pred CHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCce--eeccCC
Confidence 544 332 2334689999999999999999999999999999999999999999999999999987653322 234568
Q ss_pred cCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCch
Q 015455 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPY 360 (406)
Q Consensus 281 t~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (406)
++.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.........+....... .
T Consensus 157 ~~~y~aPE~~~~~~-~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~------~--------------- 214 (277)
T cd05607 157 TNGYMAPEILKEEP-YSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLED------E--------------- 214 (277)
T ss_pred CCCccCHHHHccCC-CCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcc------c---------------
Confidence 99999999987765 8999999999999999999999998654322222221110000 0
Q ss_pred hhhhhhhcCCCCCChHHHHHHcccCCCCCCcCH----HHHhcCcccccc
Q 015455 361 KRCIQETFKDFPPSSLPLIETLLAIDPAERLTA----TVALNSEVSYQF 405 (406)
Q Consensus 361 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta----~elL~h~~f~~~ 405 (406)
.......+++++.+||.+||+.||.+|||+ ++++.|+||+.+
T Consensus 215 ---~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~ 260 (277)
T cd05607 215 ---VKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTI 260 (277)
T ss_pred ---cccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCC
Confidence 000112578889999999999999999999 778899999864
No 152
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.7e-44 Score=338.50 Aligned_cols=259 Identities=25% Similarity=0.398 Sum_probs=210.6
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC-hHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-PESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
.|+..+.||+|+||+||+|.+..+++.||+|.+...... ......+.+|+++++.++|+|++.+.+.+... ...+++
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~--~~~~lv 78 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETK--DALCLV 78 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecC--CEEEEE
Confidence 377889999999999999999999999999998765432 22334567899999999999999999888764 469999
Q ss_pred EecccccHHH-Hhc-CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 196 FHYMEHDLAG-LAA-SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 196 ~e~~~~~l~~-~~~-~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
|||+.++.+. .+. .....+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++.......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-- 156 (285)
T cd05632 79 LTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE-- 156 (285)
T ss_pred EEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC--
Confidence 9999986554 332 233469999999999999999999999999999999999999999999999999997654322
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
......|+..|+|||++.+.. ++.++|+|||||++|+|++|..||.+.........+.........
T Consensus 157 ~~~~~~g~~~~~aPE~~~~~~-~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~------------- 222 (285)
T cd05632 157 SIRGRVGTVGYMAPEVLNNQR-YTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEE------------- 222 (285)
T ss_pred cccCCCCCcCccChHHhcCCC-CCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcccc-------------
Confidence 123457899999999987654 899999999999999999999999887665554444332111100
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcC-----HHHHhcCcccccc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT-----ATVALNSEVSYQF 405 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----a~elL~h~~f~~~ 405 (406)
...+.+++.+.+|+..||+.||.+||| +.+++.|+||+++
T Consensus 223 ------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 223 ------------VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred ------------ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence 011356778999999999999999999 8999999999864
No 153
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=8.5e-45 Score=349.47 Aligned_cols=285 Identities=37% Similarity=0.623 Sum_probs=230.7
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCC----c
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMS----C 190 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~----~ 190 (406)
.++|++.+.||+|+||.||+|++..+++.||+|++............+.+|+.+++.++|||++++++++..... .
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ 93 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence 368999999999999999999998899999999987544344445667789999999999999999887765322 3
Q ss_pred eEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 191 SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
..++++||+++++...+.. ..+++..++.++.|++.||.|||+.||+||||||+||+++.++.++|+|||++......
T Consensus 94 ~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~ 171 (343)
T cd07851 94 DVYLVTHLMGADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE 171 (343)
T ss_pred cEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccc
Confidence 5899999998888776654 46999999999999999999999999999999999999999999999999999876432
Q ss_pred CCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 271 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
.....++..|+|||.+.+...++.++|||||||++|+|++|+.||.+.+..+.+..+....+.+++..+.......
T Consensus 172 ----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 247 (343)
T cd07851 172 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSES 247 (343)
T ss_pred ----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchh
Confidence 2345678999999988664457899999999999999999999999999888899998888877776554433211
Q ss_pred cccCC--CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 351 ATLFK--PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 351 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
..... ....-..........+++.+.+||.+||+.||.+|||+.++|+||||.++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~ 304 (343)
T cd07851 248 ARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEY 304 (343)
T ss_pred HHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCcccc
Confidence 11000 00000011223334568899999999999999999999999999999875
No 154
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=3e-44 Score=345.52 Aligned_cols=283 Identities=36% Similarity=0.595 Sum_probs=225.7
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCC----ce
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMS----CS 191 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~----~~ 191 (406)
++|.+.+.||+|+||.||+|++..+|+.||+|++............+.+|+.+++.++||||+++++++..... ..
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 68999999999999999999998899999999987543333334557789999999999999999998865322 34
Q ss_pred EEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC
Q 015455 192 LYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 192 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~ 271 (406)
+|+++||+...+.... +..+++..++.++.|++.||+|||+.|++||||||+|||++.++.++|+|||++......
T Consensus 95 ~~lv~e~~~~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~- 170 (342)
T cd07879 95 FYLVMPYMQTDLQKIM---GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE- 170 (342)
T ss_pred EEEEecccccCHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC-
Confidence 7999999987665543 236899999999999999999999999999999999999999999999999998765322
Q ss_pred CCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCc
Q 015455 272 KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351 (406)
Q Consensus 272 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 351 (406)
.....+++.|+|||.+.+...++.++|||||||++|||++|+.||.+.+....+..+....+.+....+........
T Consensus 171 ---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (342)
T cd07879 171 ---MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAA 247 (342)
T ss_pred ---CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccch
Confidence 23456789999999987655588999999999999999999999999888888888888777776554433221111
Q ss_pred ccC--CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 352 TLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 352 ~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
... .........+....+..++.+.+||.+||+.||.+|||+.++|.||||+.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~ 303 (342)
T cd07879 248 KSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF 303 (342)
T ss_pred HHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence 000 000000111222334678889999999999999999999999999999864
No 155
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=2.4e-44 Score=336.00 Aligned_cols=282 Identities=42% Similarity=0.737 Sum_probs=232.0
Q ss_pred cceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEe
Q 015455 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFH 197 (406)
Q Consensus 118 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e 197 (406)
|++.+.||+|+||.||+|+...+++.||+|.+............+..|+.+++.++|+|++++++++... ...+++||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~~~~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTE--RKLYLVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC--CceEEEec
Confidence 5678899999999999999988999999999986543334445677899999999999999999998874 56999999
Q ss_pred cccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcC
Q 015455 198 YMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTS 277 (406)
Q Consensus 198 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~ 277 (406)
|+++++...+......+++..++.++.|++.||.|||+.||+|+||+|+||++++++.++|+|||++........ ....
T Consensus 79 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-~~~~ 157 (282)
T cd07829 79 YCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-TYTH 157 (282)
T ss_pred CcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc-ccCc
Confidence 999988877766556799999999999999999999999999999999999999999999999999987654322 2234
Q ss_pred ccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCC
Q 015455 278 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPR 357 (406)
Q Consensus 278 ~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (406)
..++..|+|||.+.+...++.++|+|||||++|+|++|++||.+.+..+.+.++....+.+....|.....-........
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (282)
T cd07829 158 EVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFP 237 (282)
T ss_pred cccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccccccc
Confidence 45678899999987664688999999999999999999999999999999999999998888877654322111011111
Q ss_pred CchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 358 EPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
...........+.++..+.++|..||..||++|||+.+++.||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 238 KFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred ccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 111122234445668889999999999999999999999999998
No 156
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2e-44 Score=344.58 Aligned_cols=284 Identities=22% Similarity=0.296 Sum_probs=206.8
Q ss_pred eeeeeccC--CceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEe
Q 015455 120 KIDKIGQG--TYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFH 197 (406)
Q Consensus 120 ~~~~lg~G--~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e 197 (406)
++++||+| +|++||++++..+|+.||+|.+............+.+|+.+++.++||||+++++++..+ ...++|||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~--~~~~lv~e 79 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD--NELWVVTS 79 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEEC--CEEEEEEe
Confidence 56789999 788999999999999999999987655555667788899999999999999999999874 46899999
Q ss_pred cccccHHH-HhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC--
Q 015455 198 YMEHDLAG-LAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH-- 273 (406)
Q Consensus 198 ~~~~~l~~-~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~-- 273 (406)
|++++.+. ++.. ....+++..++.++.|++.||+|||+.||+||||||+|||++.++.++++||+.+.........
T Consensus 80 ~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~ 159 (327)
T cd08227 80 FMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLR 159 (327)
T ss_pred ccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccccc
Confidence 99975554 4332 2346899999999999999999999999999999999999999999999999875443211100
Q ss_pred ----CCcCccccCcccccccccCC-ccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC-------CHH
Q 015455 274 ----PMTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP-------SEE 341 (406)
Q Consensus 274 ----~~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~-------~~~ 341 (406)
......++..|+|||++.+. ..++.++|||||||++|+|++|+.||................... +.+
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (327)
T cd08227 160 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAE 239 (327)
T ss_pred ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhh
Confidence 01223567889999998753 348899999999999999999999998766544433332211000 000
Q ss_pred Hhhh--cCC-CCcccCC------CCC-chhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 342 YWKK--SKL-PNATLFK------PRE-PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 342 ~~~~--~~~-~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
.+.. ... ....... ... ............+++.+.+||.+||+.||++|||+.++|+||||+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~ 313 (327)
T cd08227 240 ELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 313 (327)
T ss_pred hcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence 0000 000 0000000 000 00001111223467789999999999999999999999999999864
No 157
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=4.3e-44 Score=329.63 Aligned_cols=254 Identities=27% Similarity=0.397 Sum_probs=213.1
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~ 196 (406)
+|++.+.||+|++|.||+|.+..+++.|++|.+............+.+|+.+++.++|||++++++++... ...|++|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~ 78 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDK--GKLNIVM 78 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccC--CEEEEEE
Confidence 48889999999999999999999999999999987665666677888999999999999999999998774 5699999
Q ss_pred eccccc-HHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 197 HYMEHD-LAGLAASP-EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 197 e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
||+.++ +...+... ...+++..++.++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++........ .
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~-~ 157 (256)
T cd08529 79 EYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN-F 157 (256)
T ss_pred EeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccc-h
Confidence 999864 44444332 46789999999999999999999999999999999999999999999999999987654322 1
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
.....+++.|+|||++.+.. ++.++|+|||||++|+|++|+.||...+.......+.+....+
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------------- 220 (256)
T cd08529 158 ANTIVGTPYYLSPELCEDKP-YNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPP---------------- 220 (256)
T ss_pred hhccccCccccCHHHhcCCC-CCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC----------------
Confidence 23456789999999987654 8899999999999999999999998887666555543321100
Q ss_pred CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
....+++.+.++|.+||+.+|++||++.++++|||+
T Consensus 221 ------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 221 ------------VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred ------------CccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 011467789999999999999999999999999996
No 158
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-44 Score=343.05 Aligned_cols=262 Identities=27% Similarity=0.437 Sum_probs=214.9
Q ss_pred CcccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCc
Q 015455 112 PRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 112 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~ 190 (406)
......|+++++||+||-+.||++.. .+.+.||+|++.....+.....-+.+|+..|.+| .|.+||+|++|-.. .+
T Consensus 357 ~Vkg~~Yeilk~iG~GGSSkV~kV~~-s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~--d~ 433 (677)
T KOG0596|consen 357 KVKGREYEILKQIGSGGSSKVFKVLN-SDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT--DG 433 (677)
T ss_pred EECcchhhHHHhhcCCCcceeeeeec-CCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc--Cc
Confidence 33446799999999999999999984 6667899998877777778888999999999999 59999999998776 57
Q ss_pred eEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 191 SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
++||||||-+.+|...+.+.....+.-.++.+..||+.|+.+.|++||||.||||.|+|+ -.|.+||+|||.|..+..+
T Consensus 434 ~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl-VkG~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 434 YLYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL-VKGRLKLIDFGIANAIQPD 512 (677)
T ss_pred eEEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE-EeeeEEeeeechhcccCcc
Confidence 899999999999999988887777766899999999999999999999999999999999 5789999999999988766
Q ss_pred CCCC-CcCccccCcccccccccCCc----------cCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Q 015455 271 HKHP-MTSRVVTLWYRPPELLLGAT----------DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPS 339 (406)
Q Consensus 271 ~~~~-~~~~~gt~~y~aPE~~~~~~----------~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 339 (406)
.... ..+.+||+.||+||.+.... ..++++||||||||||+|+.|++||..-. ....++..+..+..
T Consensus 513 TTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~--n~~aKl~aI~~P~~ 590 (677)
T KOG0596|consen 513 TTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII--NQIAKLHAITDPNH 590 (677)
T ss_pred ccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH--HHHHHHHhhcCCCc
Confidence 5443 34579999999999985321 15689999999999999999999997542 23333333222111
Q ss_pred HHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCC--ChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 340 EEYWKKSKLPNATLFKPREPYKRCIQETFKDFPP--SSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
+ + .++.+|+ +++++++.||..||.+|||+.++|+|||++-
T Consensus 591 ~------------I-------------efp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 591 E------------I-------------EFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQI 632 (677)
T ss_pred c------------c-------------cccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence 1 1 1122322 3899999999999999999999999999974
No 159
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2.9e-44 Score=337.61 Aligned_cols=254 Identities=30% Similarity=0.440 Sum_probs=212.7
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
++|++.+.||+|+||.||++.+..+++.||+|++..... .......+.+|++++++++||||+++++++.. ....|+
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~ 78 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQD--DSNLYL 78 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEc--CCeEEE
Confidence 368999999999999999999988999999999875432 23445678889999999999999999999877 456999
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
+|||++++.+.........+++..+..++.||+.||.|||+.|++|+||+|+|||++.++.+||+|||++......
T Consensus 79 v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---- 154 (290)
T cd05580 79 VMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---- 154 (290)
T ss_pred EEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC----
Confidence 9999966544444444468999999999999999999999999999999999999999999999999999876533
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
.....+++.|+|||.+.+. .++.++|+||||+++|+|++|..||...+.....+.+.... +
T Consensus 155 ~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~---------------- 215 (290)
T cd05580 155 TYTLCGTPEYLAPEIILSK-GYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGK--V---------------- 215 (290)
T ss_pred CCCCCCCccccChhhhcCC-CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--c----------------
Confidence 2345689999999988765 48889999999999999999999998877655555554211 0
Q ss_pred CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCc-----CHHHHhcCcccccc
Q 015455 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERL-----TATVALNSEVSYQF 405 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----ta~elL~h~~f~~~ 405 (406)
.....+++.+.++|.+||..||.+|+ +++++++||||+++
T Consensus 216 -----------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 260 (290)
T cd05580 216 -----------RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGI 260 (290)
T ss_pred -----------cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccC
Confidence 01124578899999999999999999 99999999999864
No 160
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.5e-44 Score=336.14 Aligned_cols=281 Identities=44% Similarity=0.777 Sum_probs=230.7
Q ss_pred cceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEe
Q 015455 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFH 197 (406)
Q Consensus 118 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e 197 (406)
|++.+.||+|++|.||+|.+..+++.+|+|.+............+.+|+.+++.++|+||+++++++... ...++++|
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~v~e 78 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHK--GDLYLVFE 78 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccC--CCEEEEEe
Confidence 6678899999999999999888999999999876654444556778899999999999999999998774 56999999
Q ss_pred cccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcC
Q 015455 198 YMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTS 277 (406)
Q Consensus 198 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~ 277 (406)
|+++++...+......+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||.+....... .....
T Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-~~~~~ 157 (283)
T cd05118 79 FMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-RPYTH 157 (283)
T ss_pred ccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-ccccC
Confidence 99998888777766789999999999999999999999999999999999999999999999999998775443 22334
Q ss_pred ccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCC--CCcccCC
Q 015455 278 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL--PNATLFK 355 (406)
Q Consensus 278 ~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~ 355 (406)
..++..|+|||.+.+...++.++|+||||+++|+|++|+.||.+.+..+.+..+....+.+....+....- .......
T Consensus 158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05118 158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSF 237 (283)
T ss_pred ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhh
Confidence 56788999999987764589999999999999999999999999998888888888877776655443221 0000000
Q ss_pred CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 356 PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
+. ..........+.++..+.+||.+||++||.+||++.+++.||||
T Consensus 238 ~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 238 PK-KAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred cc-ccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 00 00011123334678899999999999999999999999999997
No 161
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.5e-44 Score=346.95 Aligned_cols=253 Identities=24% Similarity=0.367 Sum_probs=197.7
Q ss_pred CCcceeeeeccCCceEEEEEEE-----ccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCC
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKD-----MLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMS 189 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~ 189 (406)
++|++.+.||+|+||.||+|.+ ..+++.||+|++.... .......+.+|+.++..+ +||||+++++++... .
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-~ 84 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA-TASEHKALMSELKILIHIGNHLNVVNLLGACTKP-N 84 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc-chHHHHHHHHHHHHHHHhccCcceeeEEeEecCC-C
Confidence 7899999999999999999974 2445789999986433 334456688899999999 899999999988754 3
Q ss_pred ceEEEEEecccccHHH-HhcCC----------------------------------------------------------
Q 015455 190 CSLYLVFHYMEHDLAG-LAASP---------------------------------------------------------- 210 (406)
Q Consensus 190 ~~~~lv~e~~~~~l~~-~~~~~---------------------------------------------------------- 210 (406)
..++++|||++++.+. ++...
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 4689999999875443 33221
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC-CCcCccccCcccc
Q 015455 211 ---EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH-PMTSRVVTLWYRP 286 (406)
Q Consensus 211 ---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~-~~~~~~gt~~y~a 286 (406)
...+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++........ ......+++.|+|
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 244 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMA 244 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccC
Confidence 124788899999999999999999999999999999999999999999999999865432221 1223345788999
Q ss_pred cccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhh
Q 015455 287 PELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQ 365 (406)
Q Consensus 287 PE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (406)
||++.+.. ++.++|||||||++|||++ |..||.+....+.+.........+
T Consensus 245 PE~~~~~~-~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~--------------------------- 296 (338)
T cd05102 245 PESIFDKV-YTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRM--------------------------- 296 (338)
T ss_pred cHHhhcCC-CCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCC---------------------------
Confidence 99987654 8999999999999999997 999998865444333222210000
Q ss_pred hhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 366 ETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 366 ~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.....+++.+.+||..||+.||.+|||+.++++
T Consensus 297 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 297 RAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 001256778999999999999999999999985
No 162
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=5.6e-44 Score=344.04 Aligned_cols=284 Identities=36% Similarity=0.573 Sum_probs=224.8
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecC----Cce
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRM----SCS 191 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~----~~~ 191 (406)
++|++.+.||+|+||.||+|.+..+|+.||+|++..........+.+.+|+.++++++||||+++++++.... ...
T Consensus 17 ~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (345)
T cd07877 17 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 96 (345)
T ss_pred CceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccccc
Confidence 7899999999999999999999899999999998764433344556778999999999999999999886422 234
Q ss_pred EEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC
Q 015455 192 LYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 192 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~ 271 (406)
.|++++++++++...... ..+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||++......
T Consensus 97 ~~lv~~~~~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~- 173 (345)
T cd07877 97 VYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE- 173 (345)
T ss_pred EEEEehhcccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccccccc-
Confidence 789999998777665543 36899999999999999999999999999999999999999999999999998765322
Q ss_pred CCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCc
Q 015455 272 KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351 (406)
Q Consensus 272 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 351 (406)
.....++..|+|||.+.+...++.++|||||||++|+|++|++||.+.+....+..+....+.+....+........
T Consensus 174 ---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (345)
T cd07877 174 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 250 (345)
T ss_pred ---ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhH
Confidence 23456789999999887655588999999999999999999999999888888888888777776655433221100
Q ss_pred ccCC--CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 352 TLFK--PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 352 ~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
.... ................++++.+||..||+.||.+|||+.++|+||||+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~ 306 (345)
T cd07877 251 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 306 (345)
T ss_pred HHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhc
Confidence 0000 00000000111122467889999999999999999999999999999875
No 163
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-46 Score=327.46 Aligned_cols=256 Identities=24% Similarity=0.323 Sum_probs=209.2
Q ss_pred cCCccee-eeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeee--cCCc
Q 015455 115 ADSFEKI-DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTS--RMSC 190 (406)
Q Consensus 115 ~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~--~~~~ 190 (406)
+++|++- ++||-|-.|+|..+.++.+|+.+|+|++... ....+|++.--.. .|||||.++++|+. ....
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk 132 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-------PKARREVELHWMASGHPHIVSIIDVYENSYQGRK 132 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence 4677775 5799999999999999999999999988532 2244577765554 79999999999864 3345
Q ss_pred eEEEEEecccccHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcC---CCcEEEeeecccc
Q 015455 191 SLYLVFHYMEHDLAGLAAS--PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD---DGVLKIADFGLAS 265 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~---~~~~kl~DFgla~ 265 (406)
++.+|||.|+|+.+....+ ....|+|.++..|+.||..|+.|||+.+|.||||||+|+|... +..+||+|||+|+
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK 212 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAK 212 (400)
T ss_pred eeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccccc
Confidence 6899999999976665443 3456999999999999999999999999999999999999974 4579999999999
Q ss_pred ccCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHHHhCCCCHH
Q 015455 266 FFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEV----EQLHKIYKLCGSPSEE 341 (406)
Q Consensus 266 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~----~~~~~i~~~~~~~~~~ 341 (406)
..... ....+.+.||.|.|||++-. ..|+...|+||+||++|.|+||.+||...... ..-.+|......++.+
T Consensus 213 ~t~~~--~~L~TPc~TPyYvaPevlg~-eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~p 289 (400)
T KOG0604|consen 213 ETQEP--GDLMTPCFTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEP 289 (400)
T ss_pred ccCCC--ccccCCcccccccCHHHhCc-hhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCCh
Confidence 76543 23567788999999998754 55999999999999999999999999876543 3344554444444443
Q ss_pred HhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 342 YWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
.| ..+|++++|+|+.+|..+|.+|.|+.++++|||+.+.
T Consensus 290 EW-------------------------s~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~ 328 (400)
T KOG0604|consen 290 EW-------------------------SCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQY 328 (400)
T ss_pred hH-------------------------hHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence 33 4688999999999999999999999999999999864
No 164
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=9.6e-44 Score=342.15 Aligned_cols=285 Identities=36% Similarity=0.597 Sum_probs=226.7
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCC----c
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMS----C 190 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~----~ 190 (406)
.++|++.+.||+|+||.||+|.+..+|..||||.+............+.+|+.+++.++||||+++++++..... .
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFH 93 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccc
Confidence 378999999999999999999998999999999986543333444567789999999999999999998865322 3
Q ss_pred eEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 191 SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
.+++||+|+++++...... ..+++..++.++.||+.||.|||+.||+||||||+||+++.++.++|+|||++......
T Consensus 94 ~~~lv~e~~~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 171 (343)
T cd07880 94 DFYLVMPFMGTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE 171 (343)
T ss_pred eEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccC
Confidence 4689999997777665543 46899999999999999999999999999999999999999999999999999865432
Q ss_pred CCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 271 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
.....+++.|+|||.+.+...++.++|+|||||++|+|++|++||.+.+.......+.+..+.++...........
T Consensus 172 ----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (343)
T cd07880 172 ----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSED 247 (343)
T ss_pred ----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchh
Confidence 2345678999999998764458899999999999999999999999988888888888877666654433222111
Q ss_pred cccC--CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 351 ATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 351 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
.... .........+....+.+++.+.++|.+||+.||.+|||+.+++.||||+.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~ 304 (343)
T cd07880 248 AKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEF 304 (343)
T ss_pred HHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhh
Confidence 0000 000000011223345678889999999999999999999999999999864
No 165
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=6.9e-44 Score=338.07 Aligned_cols=280 Identities=23% Similarity=0.313 Sum_probs=209.9
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.+.||+|+||.||++++..++..||+|.+.... .......+.+|++++++++||||+++++++.. ...++++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 77 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYS--DGEISIC 77 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee--CCEEEEE
Confidence 36999999999999999999999999999999886542 34455668889999999999999999999987 4569999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN-NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
|||++++.+..+......+++..+..++.|++.||.|||+ .+++|+||||+|||++.++.++|+|||++.......
T Consensus 78 ~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--- 154 (308)
T cd06615 78 MEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--- 154 (308)
T ss_pred eeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccc---
Confidence 9999986655555455679999999999999999999997 599999999999999999999999999987653222
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
.....+++.|+|||++.+.. ++.++|+|||||++|+|++|+.||...+.... ..+........... .....+.....
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~-~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~ 231 (308)
T cd06615 155 ANSFVGTRSYMSPERLQGTH-YTVQSDIWSLGLSLVEMAIGRYPIPPPDAKEL-EAMFGRPVSEGEAK-ESHRPVSGHPP 231 (308)
T ss_pred cccCCCCcCccChhHhcCCC-CCccchHHHHHHHHHHHHhCCCCCCCcchhhH-HHhhcCcccccccc-CCcccccCCCC
Confidence 23457899999999887644 88999999999999999999999987664332 22222110000000 00000000000
Q ss_pred CC--CCch----hhhhhhhc-----CCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 355 KP--REPY----KRCIQETF-----KDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 355 ~~--~~~~----~~~~~~~~-----~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.. .... ........ ..+++++.+||.+||..||++|||+.++++||||..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~ 292 (308)
T cd06615 232 DSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKR 292 (308)
T ss_pred CccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhh
Confidence 00 0000 00000001 125667999999999999999999999999999975
No 166
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=6.2e-44 Score=333.54 Aligned_cols=255 Identities=24% Similarity=0.356 Sum_probs=205.7
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.+.||+|+||.||+|++..+++.||+|.+..+. .......+.+|++++.+++||||+++++++... ...+++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv 77 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI-TVELQKQIMSELEILYKCDSPYIIGFYGAFFVE--NRISIC 77 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC-ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC--CEEEEE
Confidence 36889999999999999999999999999999987653 334456688899999999999999999999874 458999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
|||++++.+... ..+++..+..++.|++.||.|||+.||+|+||||+|||++.++.++|+|||++....... .
T Consensus 78 ~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~---~ 150 (279)
T cd06619 78 TEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI---A 150 (279)
T ss_pred EecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc---c
Confidence 999998766543 257899999999999999999999999999999999999999999999999998664332 2
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQ---LHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
....+|..|+|||++.+.. ++.++|+|||||++|+|++|+.||........ .....+....... +.
T Consensus 151 ~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--------~~-- 219 (279)
T cd06619 151 KTYVGTNAYMAPERISGEQ-YGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDP--------PV-- 219 (279)
T ss_pred cCCCCChhhcCceeecCCC-CCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCC--------CC--
Confidence 3457899999999987654 89999999999999999999999975332111 0111111000000 00
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
......++++.+||.+||+.||.+||++.++++||||.+
T Consensus 220 -------------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~ 258 (279)
T cd06619 220 -------------LPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQ 258 (279)
T ss_pred -------------CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccccc
Confidence 001246678999999999999999999999999999975
No 167
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=9.4e-44 Score=340.70 Aligned_cols=288 Identities=36% Similarity=0.554 Sum_probs=227.6
Q ss_pred CcceeeeeccCCceEEEEEEEccC--CcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeee--cCCce
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLT--GKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTS--RMSCS 191 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~--~~~~~ 191 (406)
+|++.+.||+|+||.||++++..+ +..||+|.+............+.+|+.+++++ +||||+++++.+.. .....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 488899999999999999998877 88999999875433333455677899999999 59999999887543 22345
Q ss_pred EEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC
Q 015455 192 LYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 192 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~ 271 (406)
+|++++++++++...+.. ...+++..++.++.||+.||.|||+.|++||||||+|||++.++.++|+|||++..+....
T Consensus 81 ~~~~~e~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~ 159 (332)
T cd07857 81 LYLYEELMEADLHQIIRS-GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENP 159 (332)
T ss_pred EEEEEecccCCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccccc
Confidence 889999999888776644 4579999999999999999999999999999999999999999999999999998765332
Q ss_pred CC---CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCC
Q 015455 272 KH---PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348 (406)
Q Consensus 272 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 348 (406)
.. ......||+.|+|||++.+...++.++|||||||++|+|++|.+||.+.+....+..+....+.++.+.+.....
T Consensus 160 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (332)
T cd07857 160 GENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGS 239 (332)
T ss_pred ccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhh
Confidence 21 123457899999999887655689999999999999999999999999999999999999998887765443222
Q ss_pred CCcccC--CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 349 PNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 349 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
+..... .....-...+....+..+..+.+||.+||+.||.+|||+.++|.||||+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~ 298 (332)
T cd07857 240 PKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIW 298 (332)
T ss_pred hhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence 111000 000000011222334567889999999999999999999999999999864
No 168
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=9.6e-44 Score=334.35 Aligned_cols=259 Identities=26% Similarity=0.382 Sum_probs=211.0
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
+.|++++.||.|+||.||+|++..+++.||+|.+... .......+.+|+.+++.++|||++++++.+... ...+++
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv 87 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYWD--GKLWIM 87 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC--CeEEEE
Confidence 6799999999999999999999899999999998654 344566788899999999999999999998764 469999
Q ss_pred EecccccHHHH-hcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 196 FHYMEHDLAGL-AASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 196 ~e~~~~~l~~~-~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
|||++++.+.. +......+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||++....... ..
T Consensus 88 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-~~ 166 (292)
T cd06644 88 IEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL-QR 166 (292)
T ss_pred EecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccc-cc
Confidence 99999876553 44445679999999999999999999999999999999999999999999999999987643221 12
Q ss_pred CcCccccCcccccccccC----CccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 275 MTSRVVTLWYRPPELLLG----ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
.....+++.|+|||++.+ ...++.++|||||||++|+|++|.+||...+......++.......
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~------------ 234 (292)
T cd06644 167 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT------------ 234 (292)
T ss_pred cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCcc------------
Confidence 234567899999998852 2347889999999999999999999998776555444432211000
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
......++.++.++|.+||..||++|||+.++|+||||..+
T Consensus 235 --------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 275 (292)
T cd06644 235 --------------LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSV 275 (292)
T ss_pred --------------CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 00012466789999999999999999999999999999753
No 169
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=8.7e-44 Score=330.05 Aligned_cols=259 Identities=26% Similarity=0.439 Sum_probs=207.5
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC---ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL---EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~ 192 (406)
.+|+..+.||+|+||.||+|.+..++..||+|.+..... .......+.+|+.+++.++||||+++++++.......+
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 468999999999999999999989999999999875432 22345568889999999999999999998876556678
Q ss_pred EEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC
Q 015455 193 YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK 272 (406)
Q Consensus 193 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~ 272 (406)
++++||++++.+.........+++..++.++.|++.||+|||+.+++|+||+|+||+++.++.++|+|||++........
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM 161 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence 99999998755544444445689999999999999999999999999999999999999999999999999976543211
Q ss_pred --CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 273 --HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 273 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
.......++..|+|||++.+.. ++.++|||||||++|+|++|+.||...........+... +..
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~---~~~---------- 227 (266)
T cd06651 162 SGTGIRSVTGTPYWMSPEVISGEG-YGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQ---PTN---------- 227 (266)
T ss_pred cCCccccCCccccccCHHHhCCCC-CCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcC---CCC----------
Confidence 1122345789999999987644 889999999999999999999999876554443332211 100
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSY 403 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~ 403 (406)
......+++.+.++| .||..||++|||++++++||||+
T Consensus 228 --------------~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 228 --------------PQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred --------------CCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 001124567788898 67778999999999999999996
No 170
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1e-43 Score=340.82 Aligned_cols=285 Identities=40% Similarity=0.696 Sum_probs=226.4
Q ss_pred CCcce-eeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChH------------HHHHHHHHHHHHhhCCCCCeeeEee
Q 015455 116 DSFEK-IDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE------------SVKFMAREILILRRLDHPNVIKLEG 182 (406)
Q Consensus 116 ~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~------------~~~~~~~E~~~l~~l~h~~iv~l~~ 182 (406)
++|.. .+.||+|+||+||+|++..+++.||+|++........ ....+.+|+++++.++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 56765 4679999999999999989999999999875432210 0124668999999999999999999
Q ss_pred eeeecCCceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeec
Q 015455 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFG 262 (406)
Q Consensus 183 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFg 262 (406)
++... ...+++|||+.+++...+.. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||
T Consensus 88 ~~~~~--~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg 164 (335)
T PTZ00024 88 VYVEG--DFINLVMDIMASDLKKVVDR-KIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFG 164 (335)
T ss_pred EEecC--CcEEEEEeccccCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCcc
Confidence 98764 56999999999887776643 4468999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCC-------------CCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015455 263 LASFFDPNH-------------KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLH 329 (406)
Q Consensus 263 la~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~ 329 (406)
++....... ........+++.|+|||.+.+...++.++|+|||||++|+|++|.+||.+.+..+.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~ 244 (335)
T PTZ00024 165 LARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLG 244 (335)
T ss_pred ceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 998664110 1112234568899999998776557899999999999999999999999999999999
Q ss_pred HHHHHhCCCCHHHhhhcC-CCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 330 KIYKLCGSPSEEYWKKSK-LPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 330 ~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
.+....+.+....|.... .+....... ..........+..++.+.++|.+||+.||++|||++++|.||||+.+
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~ 319 (335)
T PTZ00024 245 RIFELLGTPNEDNWPQAKKLPLYTEFTP--RKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSD 319 (335)
T ss_pred HHHHHhCCCchhhCcchhhcccccccCc--CCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCC
Confidence 999988888765443321 111100000 01112233345678889999999999999999999999999999864
No 171
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=5.3e-44 Score=343.83 Aligned_cols=285 Identities=37% Similarity=0.613 Sum_probs=220.1
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCC------
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMS------ 189 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~------ 189 (406)
.+|++.+.||.|+||.||+|.+..+|+.||+|.+..... ...+.+.+|+++++.++||||+++++++.....
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDV 82 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccc
Confidence 689999999999999999999999999999999876543 334567789999999999999999887754322
Q ss_pred ------ceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEc-CCCcEEEeeec
Q 015455 190 ------CSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFG 262 (406)
Q Consensus 190 ------~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~-~~~~~kl~DFg 262 (406)
...|++|||+++++...+.. ..+++..++.++.||+.||.|||+.|++||||||+||+++ +++.++|+|||
T Consensus 83 ~~~~~~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg 160 (342)
T cd07854 83 GSLTELNSVYIVQEYMETDLANVLEQ--GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFG 160 (342)
T ss_pred ccccccceEEEEeecccccHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcc
Confidence 35799999999877665543 3689999999999999999999999999999999999997 45678999999
Q ss_pred cccccCCCCCC--CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Q 015455 263 LASFFDPNHKH--PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340 (406)
Q Consensus 263 la~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 340 (406)
++......... ......++..|+|||.+.+...++.++|||||||++|+|++|+.||.+.+..+....+.........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 240 (342)
T cd07854 161 LARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVRE 240 (342)
T ss_pred cceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 99865432211 1123457889999998766555889999999999999999999999998887777777665443332
Q ss_pred HHhhhc--CCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 341 EYWKKS--KLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 341 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
...... ..+.. ................+.++.++.+||.+||+.||.+|||+.++|.||||+.+
T Consensus 241 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~ 306 (342)
T cd07854 241 EDRNELLNVIPSF-VRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCY 306 (342)
T ss_pred HHhhhhhhhhhhh-hhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccc
Confidence 211110 00000 00001111112233345688889999999999999999999999999999854
No 172
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.8e-43 Score=338.15 Aligned_cols=283 Identities=36% Similarity=0.600 Sum_probs=228.2
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
.++|++.+.||.|+||.||+|.+..+++.||+|++............+.+|+.+++.++||||+++.+++... ....|+
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-~~~~~l 87 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP-LEDIYF 87 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC-CCcEEE
Confidence 4789999999999999999999999999999999865444344456677899999999999999999988653 345889
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
++||+++++...+.. ..+++..+..++.||+.||.|||+.|++||||+|+|||++.++.++|+|||++......
T Consensus 88 v~e~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~---- 161 (328)
T cd07856 88 VTELLGTDLHRLLTS--RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQ---- 161 (328)
T ss_pred EeehhccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCC----
Confidence 999998877665543 36889999999999999999999999999999999999999999999999999754322
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
.....++..|+|||.+.+...++.++|||||||++|+|++|++||.+.+.......+.+.++.++.+.............
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (328)
T cd07856 162 MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRF 241 (328)
T ss_pred cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHH
Confidence 23456788999999887645589999999999999999999999999988888888888888887665443221110000
Q ss_pred --CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 355 --KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 355 --~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
..............+.+++.+.++|.+||+.||++|||+.++|.||||..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~ 293 (328)
T cd07856 242 VQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAP 293 (328)
T ss_pred HhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCcccc
Confidence 00000011122334567889999999999999999999999999999964
No 173
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-45 Score=326.56 Aligned_cols=254 Identities=27% Similarity=0.376 Sum_probs=215.1
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCceEEEEEeccc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLYLVFHYME 200 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~ 200 (406)
+.||+|+|+.|--+....+|..||||++.+.. .....++.+|++++.+. .|+||++|+++|+++ ..+|+|||-|.
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~--gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd--~~FYLVfEKm~ 159 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP--GHSRSRVFREVETFYQCQGHKNILQLIEFFEDD--TRFYLVFEKMR 159 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCC--chHHHHHHHHHHHHHHhcCCccHHHHHHHhccc--ceEEEEEeccc
Confidence 57999999999999999999999999998763 34566788899999998 699999999999985 45999999999
Q ss_pred ccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCC---cEEEeeeccccccCCC------C
Q 015455 201 HDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDG---VLKIADFGLASFFDPN------H 271 (406)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~---~~kl~DFgla~~~~~~------~ 271 (406)
|+.+-........|++.++.+++.+|+.||.|||.+||.|||+||+|||..... -+|||||.|...+.-+ .
T Consensus 160 GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spas 239 (463)
T KOG0607|consen 160 GGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPAS 239 (463)
T ss_pred CchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCC
Confidence 876666666677999999999999999999999999999999999999997655 4899999998654322 1
Q ss_pred CCCCcCccccCccccccccc----CCccCCCccchHHHHHHHHHHHhCCCCCCCCCh---------------HHHHHHHH
Q 015455 272 KHPMTSRVVTLWYRPPELLL----GATDYGVGVDLWSAGCILAELLAGKPIMPGRTE---------------VEQLHKIY 332 (406)
Q Consensus 272 ~~~~~~~~gt~~y~aPE~~~----~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~---------------~~~~~~i~ 332 (406)
.....+.+|+..|||||+.. ....|+.+.|.||||||||.|++|.+||.|.-. ...+..|.
T Consensus 240 tP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQ 319 (463)
T KOG0607|consen 240 TPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQ 319 (463)
T ss_pred CccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHh
Confidence 22345678999999999863 234589999999999999999999999977542 34567777
Q ss_pred HHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 333 KLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
+....+++..| .++|.+..|+|..+|..|+.+|.+|.++|+|||++.
T Consensus 320 EGkYeFPdkdW-------------------------ahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~ 366 (463)
T KOG0607|consen 320 EGKYEFPDKDW-------------------------AHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQR 366 (463)
T ss_pred ccCCcCChhhh-------------------------HHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccc
Confidence 76666666544 479999999999999999999999999999999974
No 174
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1e-43 Score=332.34 Aligned_cols=258 Identities=26% Similarity=0.374 Sum_probs=211.3
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
+-|++.+.||+|+||.||+|++..++..+|+|.+.... ......+.+|+++++.++|||++++++++... ...|++
T Consensus 5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~--~~~~~v 80 (282)
T cd06643 5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS--EEELEDYMVEIDILASCDHPNIVKLLDAFYYE--NNLWIL 80 (282)
T ss_pred HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC--HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC--CEEEEE
Confidence 34788999999999999999998899999999986433 34456778899999999999999999998774 568999
Q ss_pred EecccccHHHHh-cCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 196 FHYMEHDLAGLA-ASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 196 ~e~~~~~l~~~~-~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
+||+.++.+... ......+++..+..++.|++.||.|||+.|++||||||+|||++.++.++|+|||++....... ..
T Consensus 81 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-~~ 159 (282)
T cd06643 81 IEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-QR 159 (282)
T ss_pred EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccc-cc
Confidence 999998766543 4445679999999999999999999999999999999999999999999999999997653222 22
Q ss_pred CcCccccCcccccccccC----CccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 275 MTSRVVTLWYRPPELLLG----ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
.....+++.|+|||++.. ...++.++|||||||++|+|++|++||...+..+....+........
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~----------- 228 (282)
T cd06643 160 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTL----------- 228 (282)
T ss_pred cccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCC-----------
Confidence 334568999999998742 23477899999999999999999999988776665555543211000
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.....++..+.+||.+||+.||.+|||+.++++||||..
T Consensus 229 ---------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 267 (282)
T cd06643 229 ---------------AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTV 267 (282)
T ss_pred ---------------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEec
Confidence 001246778999999999999999999999999999974
No 175
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=6.2e-44 Score=333.42 Aligned_cols=259 Identities=27% Similarity=0.420 Sum_probs=212.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.+.||.|+||.||+|.+..++..||+|.+... .....+.+.+|+++++.++||||+++++.+..+ ...|++
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv 80 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFYE--NKLWIL 80 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecC--CeEEEE
Confidence 6799999999999999999998888999999998754 334456788899999999999999999998874 468999
Q ss_pred EecccccHHH-HhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 196 FHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 196 ~e~~~~~l~~-~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
|||++++.+. .+......+++..++.++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++........ .
T Consensus 81 ~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-~ 159 (280)
T cd06611 81 IEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ-K 159 (280)
T ss_pred eeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccccc-c
Confidence 9999986555 4444456799999999999999999999999999999999999999999999999999876543222 1
Q ss_pred CcCccccCcccccccccC----CccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 275 MTSRVVTLWYRPPELLLG----ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
.....+++.|+|||++.. ...++.++|+|||||++|+|++|++||.+.+.......+.... ++.
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~---------- 227 (280)
T cd06611 160 RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSE--PPT---------- 227 (280)
T ss_pred cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCC--CCC----------
Confidence 234568999999998752 2336789999999999999999999998877665554443210 000
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
......++.++.++|..||+.||.+|||+.++|+||||...
T Consensus 228 --------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 228 --------------LDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred --------------cCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 00012467789999999999999999999999999999864
No 176
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=9.9e-44 Score=338.04 Aligned_cols=260 Identities=30% Similarity=0.392 Sum_probs=213.5
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCh-HHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEP-ESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
++|++.+.||+|+||.||+|.+..+++.||+|.+....... .....+.+|++++..++|+||+++++.+.. ....|+
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~l 78 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQT--ETYLCL 78 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeec--CCEEEE
Confidence 36999999999999999999998899999999998765432 355678889999999999999999998876 456999
Q ss_pred EEeccccc-HHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC
Q 015455 195 VFHYMEHD-LAGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK 272 (406)
Q Consensus 195 v~e~~~~~-l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~ 272 (406)
+|||+.++ +...+.. ....+++..++.++.|++.||+|||+.|++|+||||+||+++.++.++|+|||++........
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 158 (316)
T cd05574 79 VMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPP 158 (316)
T ss_pred EEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccc
Confidence 99999874 4444433 345799999999999999999999999999999999999999999999999999876532211
Q ss_pred C----------------------------CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCCh
Q 015455 273 H----------------------------PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTE 324 (406)
Q Consensus 273 ~----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~ 324 (406)
. ......||..|+|||++.+.. ++.++||||||+++|+|++|..||.+.+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 159 PVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDG-HGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred ccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCC-CCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 1 112346789999999987654 88999999999999999999999998887
Q ss_pred HHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcC----HHHHhcCc
Q 015455 325 VEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT----ATVALNSE 400 (406)
Q Consensus 325 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----a~elL~h~ 400 (406)
...+..+...... ++. ...+++.+.++|.+||..||++||| ++++|+||
T Consensus 238 ~~~~~~~~~~~~~----------~~~-----------------~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~ 290 (316)
T cd05574 238 DETFSNILKKEVT----------FPG-----------------SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHP 290 (316)
T ss_pred HHHHHHHhcCCcc----------CCC-----------------ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCc
Confidence 7666555421100 000 0136788999999999999999999 99999999
Q ss_pred ccccc
Q 015455 401 VSYQF 405 (406)
Q Consensus 401 ~f~~~ 405 (406)
||++.
T Consensus 291 ~~~~~ 295 (316)
T cd05574 291 FFRGV 295 (316)
T ss_pred hhhcC
Confidence 99863
No 177
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.3e-43 Score=327.52 Aligned_cols=256 Identities=29% Similarity=0.498 Sum_probs=214.2
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~ 196 (406)
+|++.+.||.|+||.||++.+..+++.||+|.+..........+.+.+|+++++.++||||+++++++........+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 48899999999999999999999999999999987666666677888999999999999999999988766667789999
Q ss_pred eccccc-HHHHhcC---CCCCCCHHHHHHHHHHHHHHHHHHH-----HCCCeeccCCCCCeEEcCCCcEEEeeecccccc
Q 015455 197 HYMEHD-LAGLAAS---PEVKFTEPQVKCYMHQLLSGLEHCH-----NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF 267 (406)
Q Consensus 197 e~~~~~-l~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH-----~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~ 267 (406)
||++++ +...+.. ....+++..++.++.||+.||.||| +.+++|+||+|+||+++.++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999875 4444322 3567999999999999999999999 889999999999999999999999999999877
Q ss_pred CCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcC
Q 015455 268 DPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347 (406)
Q Consensus 268 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 347 (406)
..... ......+++.|+|||.+.+.. ++.++|+||||+++|+|++|+.||...+.....+.+.....
T Consensus 161 ~~~~~-~~~~~~~~~~~~~pE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~----------- 227 (265)
T cd08217 161 GHDSS-FAKTYVGTPYYMSPEQLNHMS-YDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKF----------- 227 (265)
T ss_pred cCCcc-cccccccCCCccChhhhcCCC-CCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCC-----------
Confidence 54332 123456899999999987654 88999999999999999999999998775554444322110
Q ss_pred CCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 348 LPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
......+++.+.+++.+||+.||.+|||+.++|+|||+
T Consensus 228 -----------------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 228 -----------------RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred -----------------CCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 01112567889999999999999999999999999996
No 178
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-45 Score=335.30 Aligned_cols=257 Identities=26% Similarity=0.381 Sum_probs=224.4
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCceE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~~~ 192 (406)
..+|..+.+||+|+||+|.++..+.+...||||+++++.. +.+..+.-..|..+|... +-|.+++++..|+.-+ .+
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD--RL 425 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD--RL 425 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhh--he
Confidence 4689999999999999999999999999999999988754 555666667788888876 5788999999887743 49
Q ss_pred EEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC
Q 015455 193 YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK 272 (406)
Q Consensus 193 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~ 272 (406)
|+||||+.|+.+.+..++-++|.+..+..++.+|+.||-+||++|||+||||.+|||++.+|++||+|||+++.---. .
T Consensus 426 yFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~-~ 504 (683)
T KOG0696|consen 426 YFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD-G 504 (683)
T ss_pred eeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccC-C
Confidence 999999999999989888889999999999999999999999999999999999999999999999999999863222 2
Q ss_pred CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 273 HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 273 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
..+.+++|||.|+|||++.- .+|+.++||||+||+||||+.|++||.|.++.+.++.|.+..-..+
T Consensus 505 ~TTkTFCGTPdYiAPEIi~Y-qPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyP------------- 570 (683)
T KOG0696|consen 505 VTTKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYP------------- 570 (683)
T ss_pred cceeeecCCCcccccceEEe-cccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCc-------------
Confidence 23566899999999998764 4599999999999999999999999999999999999988432222
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcC-----HHHHhcCccccc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT-----ATVALNSEVSYQ 404 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----a~elL~h~~f~~ 404 (406)
+.+|.++.++...+|.+.|.+|.. -.++-.||||+.
T Consensus 571 ----------------KslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~ 611 (683)
T KOG0696|consen 571 ----------------KSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRR 611 (683)
T ss_pred ----------------ccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhh
Confidence 478899999999999999999975 467888999974
No 179
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.5e-43 Score=329.86 Aligned_cols=255 Identities=26% Similarity=0.430 Sum_probs=211.8
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.+.||.|+||.||+|++..+++.||+|.+..... ......+.+|+.+++.++|+|++++++++... ...|++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~~v 77 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA-EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG--SKLWII 77 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc-chHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC--CeEEEE
Confidence 368999999999999999999989999999999876542 33445678899999999999999999998874 569999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
+||+.++.+....... .+++..++.++.|++.||.|||+.+++|+||+|+||++++++.++|+|||++........ ..
T Consensus 78 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-~~ 155 (274)
T cd06609 78 MEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS-KR 155 (274)
T ss_pred EEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeeccccc-cc
Confidence 9999886555444433 889999999999999999999999999999999999999999999999999988754322 23
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCC
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFK 355 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 355 (406)
....+++.|+|||++.+.. ++.++|||||||++|+|++|..||...+.......+......
T Consensus 156 ~~~~~~~~y~~PE~~~~~~-~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~------------------ 216 (274)
T cd06609 156 NTFVGTPFWMAPEVIKQSG-YDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPP------------------ 216 (274)
T ss_pred ccccCCccccChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCC------------------
Confidence 4457888999999987755 899999999999999999999999877655444433321100
Q ss_pred CCCchhhhhhhhcC-CCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 356 PREPYKRCIQETFK-DFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 356 ~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.... .+++++.++|..||..||.+|||+.++++||||+.
T Consensus 217 ----------~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~ 256 (274)
T cd06609 217 ----------SLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKK 256 (274)
T ss_pred ----------CCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcC
Confidence 0001 26788999999999999999999999999999975
No 180
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.5e-43 Score=331.07 Aligned_cols=257 Identities=25% Similarity=0.391 Sum_probs=203.7
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHH-HhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILI-LRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~-l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
++|++.+.||+|+||.||+|++..+|+.||+|.+.......... .+..|+.+ ++.++||||+++++++... ...|+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~iv~~~~~~~~~--~~~~l 77 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQK-RLLMDLDISMRSVDCPYTVTFYGALFRE--GDVWI 77 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHH-HHHHHHHHHHHHcCCCCeeeeeEEEecC--CcEEE
Confidence 46999999999999999999999999999999987654333333 34456665 6667999999999998764 45999
Q ss_pred EEecccccHHHHhc---CCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 195 VFHYMEHDLAGLAA---SPEVKFTEPQVKCYMHQLLSGLEHCHNN-GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 195 v~e~~~~~l~~~~~---~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
+|||+++++...+. .....+++..++.++.||+.||+|||++ +++||||||+|||++.++.+||+|||++......
T Consensus 78 v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 78 CMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred EhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 99999987765543 3446799999999999999999999997 9999999999999999999999999999876432
Q ss_pred CCCCCcCccccCcccccccccCC---ccCCCccchHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHhCCCCHHHhhhc
Q 015455 271 HKHPMTSRVVTLWYRPPELLLGA---TDYGVGVDLWSAGCILAELLAGKPIMPGRT-EVEQLHKIYKLCGSPSEEYWKKS 346 (406)
Q Consensus 271 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~~DvwslGv~l~ell~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~ 346 (406)
.. .....++..|+|||.+.+. ..++.++|+|||||++|+|++|+.||.... ..+.+..+.... .+
T Consensus 158 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~------- 226 (283)
T cd06617 158 VA--KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEP--SP------- 226 (283)
T ss_pred cc--cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcC--CC-------
Confidence 21 2335678999999988642 336889999999999999999999996532 223333332210 00
Q ss_pred CCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 347 KLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.++ ...+|.++.+||.+||..||.+|||+.++++||||..
T Consensus 227 ~~~------------------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 266 (283)
T cd06617 227 QLP------------------AEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFEL 266 (283)
T ss_pred CCC------------------ccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhh
Confidence 000 0246788999999999999999999999999999975
No 181
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.6e-43 Score=328.17 Aligned_cols=254 Identities=28% Similarity=0.516 Sum_probs=207.1
Q ss_pred cceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC-------hHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCc
Q 015455 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-------PESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 118 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-------~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~ 190 (406)
|.+...||.|+||.||+|.+..+++.||+|.+...... ....+.+.+|+.++++++||||+++++++... .
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~ 79 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDA--D 79 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeC--C
Confidence 67788999999999999998888999999988654322 12335678899999999999999999998774 4
Q ss_pred eEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 191 SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
+.+++|||++++.+..+......+++..+..++.|++.||+|||+.|++||||+|+||+++.++.++|+|||+++.....
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEAN 159 (267)
T ss_pred ccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccc
Confidence 68999999988655555555567899999999999999999999999999999999999999999999999999877532
Q ss_pred CCC-----CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhh
Q 015455 271 HKH-----PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK 345 (406)
Q Consensus 271 ~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 345 (406)
... ......++..|+|||.+.+.. ++.++|+|||||++|+|++|+.||.+.+.......+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--------- 229 (267)
T cd06628 160 SLSTKTNGARPSLQGSVFWMAPEVVKQTS-YTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENAS--------- 229 (267)
T ss_pred cccCCccccccccCCCcCccChhHhccCC-CCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCC---------
Confidence 111 112245788999999887654 88899999999999999999999988765544443322100
Q ss_pred cCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 346 SKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
......++..+.++|++||+.||.+|||+.++++||||
T Consensus 230 -------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 230 -------------------PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred -------------------CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 01112567889999999999999999999999999997
No 182
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-43 Score=331.79 Aligned_cols=244 Identities=19% Similarity=0.199 Sum_probs=202.3
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCC-hHHHHHHHHHHHHHhhCCCCCeeeEeeeeee--cCCceEEEEEec
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-PESVKFMAREILILRRLDHPNVIKLEGLVTS--RMSCSLYLVFHY 198 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~--~~~~~~~lv~e~ 198 (406)
..||+|++|.||+|.. +|+.||||.+...... ....+.+.+|+.+|.+++|||||++++++.+ .....++++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 6799999999999974 7899999998765432 2334677899999999999999999999876 445678999999
Q ss_pred ccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcC
Q 015455 199 MEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN-GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTS 277 (406)
Q Consensus 199 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~ 277 (406)
+.++.+.........+++.....++.|++.||.|||+. +++||||||+|||++.++.+||+|||+++..... ...
T Consensus 104 ~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~----~~~ 179 (283)
T PHA02988 104 CTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP----PFK 179 (283)
T ss_pred CCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc----ccc
Confidence 99876665555566899999999999999999999984 9999999999999999999999999999866432 134
Q ss_pred ccccCcccccccccCC-ccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCC
Q 015455 278 RVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKP 356 (406)
Q Consensus 278 ~~gt~~y~aPE~~~~~-~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (406)
..++..|+|||++.+. ..++.++|||||||++|||++|+.||.+.+..+....+......++
T Consensus 180 ~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~----------------- 242 (283)
T PHA02988 180 NVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLK----------------- 242 (283)
T ss_pred ccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC-----------------
Confidence 5678999999998652 3489999999999999999999999998887776666544221111
Q ss_pred CCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 357 REPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.....++.+.+||.+||+.||.+|||+.++++
T Consensus 243 ----------~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 243 ----------LPLDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred ----------CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 00246788999999999999999999999986
No 183
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1e-43 Score=333.04 Aligned_cols=259 Identities=21% Similarity=0.385 Sum_probs=209.6
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++++.||+|+||.||+|++..+|..||+|.+... ........+.+|+.++++++||||+++++.+.. ....|++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv 77 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE-LDESKFNQIIMELDILHKAVSPYIVDFYGAFFI--EGAVYMC 77 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecc-cCHHHHHHHHHHHHHHHhcCCCcHHhhhhheec--CCeEEEE
Confidence 4689999999999999999999889999999998754 234445678889999999999999999998877 4569999
Q ss_pred EecccccHHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC
Q 015455 196 FHYMEHDLAGLAASP---EVKFTEPQVKCYMHQLLSGLEHCHN-NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~ 271 (406)
|||++++.+..+... ...+++..+..++.||+.||.|||+ .|++|+||||+||+++.++.++|+|||++.......
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (286)
T cd06622 78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL 157 (286)
T ss_pred EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc
Confidence 999998655544333 3478999999999999999999997 599999999999999999999999999997653222
Q ss_pred CCCCcCccccCcccccccccCCc-----cCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhc
Q 015455 272 KHPMTSRVVTLWYRPPELLLGAT-----DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS 346 (406)
Q Consensus 272 ~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 346 (406)
.....+++.|+|||++.+.. .++.++|+|||||++|+|++|+.||...........+.........
T Consensus 158 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~------ 228 (286)
T cd06622 158 ---AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPP------ 228 (286)
T ss_pred ---cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCC------
Confidence 23346788999999885432 2578999999999999999999999876554444433332211110
Q ss_pred CCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 347 KLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
.....+++++.+||.+||..||.+||++.++++||||..+
T Consensus 229 -------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~ 268 (286)
T cd06622 229 -------------------TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKY 268 (286)
T ss_pred -------------------CCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhc
Confidence 1112477889999999999999999999999999999753
No 184
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.6e-43 Score=327.75 Aligned_cols=261 Identities=28% Similarity=0.412 Sum_probs=212.5
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.+.||.|+||+||+|....++..+|+|++....... ....+.+|+.+++.++|+|++++++.+.. ....|++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~iv 77 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVV--GDELWLV 77 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEee--CCEEEEE
Confidence 46999999999999999999988899999999987654433 56678899999999999999999998877 4568999
Q ss_pred EecccccHHHHhc-CC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC
Q 015455 196 FHYMEHDLAGLAA-SP--EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK 272 (406)
Q Consensus 196 ~e~~~~~l~~~~~-~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~ 272 (406)
||++.++.+.... .. ...+++..++.++.|++.||+|||+.|++|+||+|+||++++++.++|+|||++..+.....
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 78 MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred EeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 9999875544333 22 24689999999999999999999999999999999999999999999999999987754332
Q ss_pred C---CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCC
Q 015455 273 H---PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLP 349 (406)
Q Consensus 273 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 349 (406)
. ......++..|+|||++.....++.++|+|||||++|+|++|+.||...+....+.++... .+. .++
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~---~~~------~~~ 228 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN---DPP------SLE 228 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC---CCC------CcC
Confidence 2 1233468999999999876545889999999999999999999999877665555444332 000 000
Q ss_pred CcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 350 NATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
. ......+++.+.+||.+||..||.+|||+.++++||||
T Consensus 229 ~--------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 229 T--------------GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred C--------------ccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 0 00023577889999999999999999999999999998
No 185
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=4.4e-43 Score=328.36 Aligned_cols=280 Identities=38% Similarity=0.658 Sum_probs=220.1
Q ss_pred cceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC---CCCCeeeEeeeeeecCC---ce
Q 015455 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL---DHPNVIKLEGLVTSRMS---CS 191 (406)
Q Consensus 118 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~~iv~l~~~~~~~~~---~~ 191 (406)
|++.+.||+|+||.||+|++..+++.||+|.++...........+.+|+.+++++ +|+|++++++++..... ..
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 6788999999999999999988899999999975543333334566688777666 59999999999876432 34
Q ss_pred EEEEEecccccHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 192 LYLVFHYMEHDLAGLAASP-EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 192 ~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
.+++|||+.+++...+... ...+++..++.++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~ 160 (287)
T cd07838 81 LTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFE 160 (287)
T ss_pred eEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCC
Confidence 8999999998877765443 346999999999999999999999999999999999999999999999999999876433
Q ss_pred CCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 271 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
.. .....++..|+|||++.+.. ++.++|+|||||++|+|++|++||.+.+..+.+.++.+....+....|.....-.
T Consensus 161 ~~--~~~~~~~~~~~~PE~~~~~~-~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07838 161 MA--LTSVVVTLWYRAPEVLLQSS-YATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLP 237 (287)
T ss_pred cc--cccccccccccChHHhccCC-CCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccc
Confidence 22 23445788999999987754 8899999999999999999999999999988888888876665543332211100
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
.... ............+.+++.+.++|..||+.||.+|||+.++++||||
T Consensus 238 ~~~~--~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 238 RSSF--PSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred hhhc--ccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 0000 0001111233334667889999999999999999999999999998
No 186
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-45 Score=350.03 Aligned_cols=254 Identities=29% Similarity=0.467 Sum_probs=219.7
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
..|+-++.||.|+||.||-|++..+...||||++..+.. ..+.+..++.|+..|++++|||++.+.|+|..+. ..|+
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~--TaWL 103 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREH--TAWL 103 (948)
T ss_pred HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccc--hHHH
Confidence 458889999999999999999999999999999987654 4556778999999999999999999999987643 4799
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
|||||-|+-.+++.-..+++-+.++..|..+.+.||+|||+++.||||||+.|||+++.|.|||+|||.|....+
T Consensus 104 VMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P----- 178 (948)
T KOG0577|consen 104 VMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP----- 178 (948)
T ss_pred HHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCc-----
Confidence 999999987777766667899999999999999999999999999999999999999999999999999987654
Q ss_pred CcCccccCccccccccc--CCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 275 MTSRVVTLWYRPPELLL--GATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~--~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
..+++|||.|||||++. ..+.|+-++||||||++..||.-.+||....+....+..|.+.-.+. ++
T Consensus 179 AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPt---------Lq--- 246 (948)
T KOG0577|consen 179 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPT---------LQ--- 246 (948)
T ss_pred hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCC---------CC---
Confidence 46789999999999985 33459999999999999999999999998888777666665521100 00
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSY 403 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~ 403 (406)
-+..+..+.+|+..||.+-|.+|||++++|.|+|..
T Consensus 247 ---------------s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~ 282 (948)
T KOG0577|consen 247 ---------------SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVL 282 (948)
T ss_pred ---------------CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhc
Confidence 024567799999999999999999999999999975
No 187
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=9.8e-44 Score=329.67 Aligned_cols=257 Identities=26% Similarity=0.417 Sum_probs=206.9
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.+.||+|+||.||+|++..+++.||+|.++.... .....+.+|+.+++.++||||+++++.+.. ....|++
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~--~~~~~lv 84 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG--EDFAVVQQEIIMMKDCKHSNIVAYFGSYLR--RDKLWIC 84 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCeeeEEEEEEe--CCEEEEE
Confidence 579999999999999999999989999999999876532 234557789999999999999999998877 4568999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
|||++++.+..+....+.+++..++.++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++....... ...
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-~~~ 163 (267)
T cd06645 85 MEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI-AKR 163 (267)
T ss_pred EeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc-ccc
Confidence 9999986555555555689999999999999999999999999999999999999999999999999987664322 223
Q ss_pred cCccccCccccccccc--CCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 276 TSRVVTLWYRPPELLL--GATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~--~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
....|++.|+|||++. ....++.++|+|||||++|+|++|..||...........+......++.
T Consensus 164 ~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~------------- 230 (267)
T cd06645 164 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPK------------- 230 (267)
T ss_pred ccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCc-------------
Confidence 4457899999999874 2234788999999999999999999999766544433322211000000
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEV 401 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~ 401 (406)
......++..+.++|.+||+.||++|||+.++|+|||
T Consensus 231 -----------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 231 -----------LKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred -----------ccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 0001145677999999999999999999999999998
No 188
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=4e-43 Score=323.46 Aligned_cols=254 Identities=27% Similarity=0.455 Sum_probs=215.2
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~ 196 (406)
+|+.++.||.|+||.||.+++..+++.+++|.+............+.+|+.++++++|+||+++++++.+ ...++++|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~~~~ 78 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMD--DNTLLIEM 78 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEec--CCeEEEEE
Confidence 4899999999999999999999999999999988766656666778899999999999999999999987 45699999
Q ss_pred ecccc-cHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 197 HYMEH-DLAGLAASP-EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 197 e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
||+.+ ++...+... ...+++..+..++.|++.||.|||+.|++|+||+|+||++++++.+||+|||++........ .
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~-~ 157 (256)
T cd08221 79 EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS-M 157 (256)
T ss_pred EecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc-c
Confidence 99987 455544433 45789999999999999999999999999999999999999999999999999987644332 2
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
.....+++.|+|||++.+.. ++.++|+||||+++|+|++|..||...+..+....+......+
T Consensus 158 ~~~~~~~~~y~ape~~~~~~-~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~---------------- 220 (256)
T cd08221 158 AETVVGTPYYMSPELCQGVK-YNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTP---------------- 220 (256)
T ss_pred ccccCCCccccCHhhcCCCC-CCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC----------------
Confidence 34457899999999887654 7889999999999999999999999877776666654321100
Q ss_pred CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
....++..+.++|.+||..||.+|||+.++|+|+|+
T Consensus 221 ------------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 221 ------------VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred ------------CccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 013567889999999999999999999999999996
No 189
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.5e-43 Score=333.72 Aligned_cols=260 Identities=28% Similarity=0.343 Sum_probs=211.2
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
++|++.+.||+|+||.||++++..+++.||+|.+..... .......+.+|+++++.++||||+++++.+.. ...+++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~l 78 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFET--KRHLCM 78 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEec--CCEEEE
Confidence 369999999999999999999999999999999876543 23345567789999999999999999998876 456999
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC-
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH- 273 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~- 273 (406)
+|||++++.+..+......+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||+++........
T Consensus 79 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~ 158 (305)
T cd05609 79 VMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN 158 (305)
T ss_pred EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence 9999998665555555567999999999999999999999999999999999999999999999999998642111000
Q ss_pred -------------CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Q 015455 274 -------------PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340 (406)
Q Consensus 274 -------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 340 (406)
......++..|+|||.+.+.. ++.++|+|||||++|+|++|..||.+.+..+....+.......+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (305)
T cd05609 159 LYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQG-YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE 237 (305)
T ss_pred ccccccccchhhccccCCccCccccCchhccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCC
Confidence 011235688999999987644 899999999999999999999999988776666655442111100
Q ss_pred HHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcC---HHHHhcCccccc
Q 015455 341 EYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT---ATVALNSEVSYQ 404 (406)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---a~elL~h~~f~~ 404 (406)
....+++.+.++|.+||+.||++||| +.++|+||||..
T Consensus 238 --------------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~ 278 (305)
T cd05609 238 --------------------------GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLG 278 (305)
T ss_pred --------------------------ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccC
Confidence 00246778999999999999999998 899999999964
No 190
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=9.5e-44 Score=329.77 Aligned_cols=257 Identities=26% Similarity=0.429 Sum_probs=205.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.+.||+|+||.||+|++..+++.||+|++..... .....+.+|+.+++.++||||+++++++... ...|+|
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~--~~~~iv 84 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG--DDFSLIQQEIFMVKECKHCNIVAYFGSYLSR--EKLWIC 84 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc--chHHHHHHHHHHHHhcCCCCeeeeeEEEEeC--CEEEEE
Confidence 679999999999999999999989999999999875432 2345677899999999999999999998774 468999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
|||++++.+..+......+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||++........ ..
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~-~~ 163 (267)
T cd06646 85 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA-KR 163 (267)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccccc-cc
Confidence 99999866654444456789999999999999999999999999999999999999999999999999987643221 12
Q ss_pred cCccccCcccccccccC--CccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 276 TSRVVTLWYRPPELLLG--ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~--~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
....+++.|+|||.+.+ ...++.++|+|||||++|+|++|+.||......+....+......+
T Consensus 164 ~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~--------------- 228 (267)
T cd06646 164 KSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQP--------------- 228 (267)
T ss_pred CccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCC---------------
Confidence 34568899999998742 2347789999999999999999999997654433222221100000
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEV 401 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~ 401 (406)
+. ......++..+.+||+.||+.||++|||++++|+|+|
T Consensus 229 --~~-------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 229 --PK-------LKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred --CC-------CccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 00 0001246778999999999999999999999999987
No 191
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-44 Score=315.70 Aligned_cols=261 Identities=24% Similarity=0.383 Sum_probs=218.7
Q ss_pred ccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCceE
Q 015455 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 114 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~~~ 192 (406)
..++.+.+..||+|..|+|++++.+.+|...|||.+...... +..++++..+.++..- ++|+||+.+|+|..... +
T Consensus 90 dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nk-ee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~d--V 166 (391)
T KOG0983|consen 90 DINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNK-EENKRILMDLDVVLKSHDCPYIVQCFGYFITNTD--V 166 (391)
T ss_pred ChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCH-HHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCch--H
Confidence 356788899999999999999999999999999999876544 4455666677776655 59999999999988544 8
Q ss_pred EEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC
Q 015455 193 YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN-GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 193 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~ 271 (406)
++.||.|......++..-.++++|..+-.+...+++||.||.++ ||+|||+||+|||+|+.|++||||||.+-.+-...
T Consensus 167 ~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk 246 (391)
T KOG0983|consen 167 FICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK 246 (391)
T ss_pred HHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeeccc
Confidence 89999998877777776677899999999999999999999975 99999999999999999999999999998875554
Q ss_pred CCCCcCccccCcccccccccC--CccCCCccchHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHhCCCCHHHhhhcCC
Q 015455 272 KHPMTSRVVTLWYRPPELLLG--ATDYGVGVDLWSAGCILAELLAGKPIMPGRT-EVEQLHKIYKLCGSPSEEYWKKSKL 348 (406)
Q Consensus 272 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~DvwslGv~l~ell~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~ 348 (406)
. .+...|-+.|||||.+.- ...|+.++||||||++++||+||+.||.+.+ +-+.+.++.+.. +|. +
T Consensus 247 A--htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~e-PP~--------L 315 (391)
T KOG0983|consen 247 A--HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEE-PPL--------L 315 (391)
T ss_pred c--cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcC-CCC--------C
Confidence 4 356688999999999853 3558999999999999999999999999854 556777776521 111 1
Q ss_pred CCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 349 PNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
+. ...+++++++|+..||.+|+.+||.-.++|+|||+..+
T Consensus 316 ~~-----------------~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~y 355 (391)
T KOG0983|consen 316 PG-----------------HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRY 355 (391)
T ss_pred Cc-----------------ccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeec
Confidence 11 12589999999999999999999999999999998754
No 192
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.9e-44 Score=358.31 Aligned_cols=283 Identities=24% Similarity=0.307 Sum_probs=204.9
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCC-cEEEEEEE--------------ec-CCCChHHHHHHHHHHHHHhhCCCCCee
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTG-KIVALKKV--------------RF-DNLEPESVKFMAREILILRRLDHPNVI 178 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~-~~vaiK~~--------------~~-~~~~~~~~~~~~~E~~~l~~l~h~~iv 178 (406)
.++|++++.||+|+||+||+|...... ..++.|.+ .+ ..........+.+|+.+|++++|||||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 468999999999999999998754322 22222211 00 011223345678899999999999999
Q ss_pred eEeeeeeecCCceEEEEEecccccHHHHhcCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCC
Q 015455 179 KLEGLVTSRMSCSLYLVFHYMEHDLAGLAASP----EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDG 254 (406)
Q Consensus 179 ~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~ 254 (406)
++++++... ...|++++++.+++..++... ........++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 227 ~l~~~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~ 304 (501)
T PHA03210 227 KIEEILRSE--ANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDG 304 (501)
T ss_pred cEeEEEEEC--CeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence 999999874 458999999998887765432 22345677889999999999999999999999999999999999
Q ss_pred cEEEeeeccccccCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCC-C--CChHHHHHHH
Q 015455 255 VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMP-G--RTEVEQLHKI 331 (406)
Q Consensus 255 ~~kl~DFgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~-~--~~~~~~~~~i 331 (406)
.+||+|||+++.+............||+.|+|||++.+.. ++.++|||||||++|||++|..++. + ......+.++
T Consensus 305 ~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~ 383 (501)
T PHA03210 305 KIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDG-YCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKI 383 (501)
T ss_pred CEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCC-CCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHH
Confidence 9999999999887644433344568999999999987754 8999999999999999999885443 2 2344555555
Q ss_pred HHHhCCCCHHH-------hhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 332 YKLCGSPSEEY-------WKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 332 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
....+....+. +.... ...+..........+. ...++.++.++|.+||++||.+|||+.|+|+||||..
T Consensus 384 ~~~~~~~~~~~p~~~~~~~~~i~--~~~~~~~~~~~~~~~~--~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~ 459 (501)
T PHA03210 384 IDSLSVCDEEFPDPPCKLFDYID--SAEIDHAGHSVPPLIR--NLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSA 459 (501)
T ss_pred HHhcccChhhcCCcHHHHHHHhh--hhhcccCccchhhHHH--hcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhc
Confidence 55444332211 10000 0000011111111111 1246788999999999999999999999999999975
No 193
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.9e-43 Score=328.56 Aligned_cols=256 Identities=25% Similarity=0.442 Sum_probs=204.7
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecC----Cc
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRM----SC 190 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~----~~ 190 (406)
+.|++.+.||+|+||.||+|.+..+++.||+|.+..... ....+.+|+.++..+ +|+||+++++++.... ..
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc---cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 579999999999999999999989999999999875432 234567899999998 7999999999986532 24
Q ss_pred eEEEEEecccccH-HHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccC
Q 015455 191 SLYLVFHYMEHDL-AGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD 268 (406)
Q Consensus 191 ~~~lv~e~~~~~l-~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~ 268 (406)
..|++|||+.++. ...+.. ....+++..+..++.|++.||+|||+.+|+|+||||+||++++++.++|+|||++....
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~ 162 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 162 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecc
Confidence 6899999998754 444443 34578999999999999999999999999999999999999999999999999998664
Q ss_pred CCCCCCCcCccccCcccccccccC----CccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhh
Q 015455 269 PNHKHPMTSRVVTLWYRPPELLLG----ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344 (406)
Q Consensus 269 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 344 (406)
.... ......|++.|+|||++.+ ...++.++|||||||++|+|++|..||...........+... +.
T Consensus 163 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~---~~----- 233 (272)
T cd06637 163 RTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN---PA----- 233 (272)
T ss_pred cccc-cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcC---CC-----
Confidence 3222 2344678999999998853 224788999999999999999999999765543333222110 00
Q ss_pred hcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 345 KSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
+ ......++..+.+||.+||..||.+|||+.+++.||||
T Consensus 234 ----~---------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 234 ----P---------------RLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred ----C---------------CCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 0 00012467789999999999999999999999999997
No 194
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.6e-43 Score=332.20 Aligned_cols=256 Identities=27% Similarity=0.470 Sum_probs=212.3
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
.+|++.+.||.|+||.||+|.+..+|+.||+|.+...... ..+.+.+|+.+++.++|||++++++++.. ....|++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 94 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQP--KKELIINEILVMKELKNPNIVNFLDSFLV--GDELFVV 94 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCc--hHHHHHHHHHHHHhcCCCceeeeeeeEec--CceEEEE
Confidence 5799999999999999999999999999999998755432 34567889999999999999999999876 4469999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
+||+.++.+..+... ..+++.++..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||++......... .
T Consensus 95 ~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~-~ 172 (296)
T cd06655 95 MEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK-R 172 (296)
T ss_pred EEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccccccc-C
Confidence 999998766655443 36899999999999999999999999999999999999999999999999998876543321 2
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCC
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFK 355 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 355 (406)
....+++.|+|||.+.+.. ++.++|||||||++|+|++|+.||.+.+.......+... ..+..
T Consensus 173 ~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~~~~~--------------- 235 (296)
T cd06655 173 STMVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPEL--------------- 235 (296)
T ss_pred CCcCCCccccCcchhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCccc---------------
Confidence 3456789999999887644 889999999999999999999999888766554443321 11000
Q ss_pred CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 356 PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.....+++.+.+||.+||..||.+|||+.+++.||||+.
T Consensus 236 ----------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~ 274 (296)
T cd06655 236 ----------QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKL 274 (296)
T ss_pred ----------CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhh
Confidence 011256778999999999999999999999999999985
No 195
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.7e-43 Score=332.11 Aligned_cols=256 Identities=26% Similarity=0.456 Sum_probs=208.9
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
.+|++.+.||+|+||.||+|.+..+++.||+|.+...... ....+.+|+.+++.++|+|++++++.+.. ....|+|
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~v~~~~~~~~~--~~~~~lv 95 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLV--GDELWVV 95 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhCCCCCEeeEEEEEEe--CCEEEEe
Confidence 6899999999999999999999899999999998765433 34567789999999999999999999887 4469999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
|||+.++.+..+... ..+++.++..++.|++.||+|||+.||+||||||+|||++.++.++|+|||++......... .
T Consensus 96 ~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~-~ 173 (296)
T cd06654 96 MEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-R 173 (296)
T ss_pred ecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccc-c
Confidence 999987554444332 36899999999999999999999999999999999999999999999999998865433221 2
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCC
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFK 355 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 355 (406)
....+++.|+|||.+.+.. ++.++|||||||++|+|++|+.||...+.......+... +.+..
T Consensus 174 ~~~~~~~~y~aPE~~~~~~-~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~--------------- 236 (296)
T cd06654 174 STMVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTPEL--------------- 236 (296)
T ss_pred CcccCCccccCHHHHcCCC-CCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcC-CCCCC---------------
Confidence 3456889999999887644 789999999999999999999999877654433322211 00000
Q ss_pred CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 356 PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.....+++.+.+||.+||..||.+|||+.++++||||..
T Consensus 237 ----------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~ 275 (296)
T cd06654 237 ----------QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275 (296)
T ss_pred ----------CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhc
Confidence 001246778999999999999999999999999999964
No 196
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-45 Score=351.84 Aligned_cols=258 Identities=25% Similarity=0.369 Sum_probs=219.2
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
+.|+++..||.|+||+||+|..+.++-..|.|+|... ..+..+.+.-|++||...+||+||+|++.|... +.+||+
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk--seEELEDylVEIeILa~CdHP~ivkLl~ayy~e--nkLwil 107 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK--SEEELEDYLVEIEILAECDHPVIVKLLSAYYFE--NKLWIL 107 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc--chhHHhhhhhhhhhhhcCCChHHHHHHHHHhcc--CceEEE
Confidence 5688999999999999999999888888899988643 356678888899999999999999999988774 459999
Q ss_pred EecccccHHHH-hcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 196 FHYMEHDLAGL-AASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 196 ~e~~~~~l~~~-~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
.|||+||-.+. +..-+..+++.++..+++|++.||.|||+++|||||||+.|||++-+|.++|+|||.+..... ....
T Consensus 108 iEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~-t~qk 186 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS-TRQK 186 (1187)
T ss_pred EeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchh-HHhh
Confidence 99999987664 345556899999999999999999999999999999999999999999999999999865432 2233
Q ss_pred CcCccccCcccccccccC----CccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 275 MTSRVVTLWYRPPELLLG----ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
..+++|||+|||||+... ..+|+.++||||||++|.||..+.+|-...+....+-+|.+.- |+. .
T Consensus 187 RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSe--PPT-L-------- 255 (1187)
T KOG0579|consen 187 RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE--PPT-L-------- 255 (1187)
T ss_pred hccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcC--CCc-c--------
Confidence 467899999999999753 3469999999999999999999999999999888888776531 110 0
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
-.+.+.+..+.||+..||.+||..||++.++|+||||+.
T Consensus 256 ---------------lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~ 294 (1187)
T KOG0579|consen 256 ---------------LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQN 294 (1187)
T ss_pred ---------------cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCccccc
Confidence 001255778999999999999999999999999999974
No 197
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3.2e-43 Score=324.10 Aligned_cols=254 Identities=25% Similarity=0.462 Sum_probs=211.3
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~ 196 (406)
+|++.+.||+|+||.||++++..+|+.||+|.+............+.+|+.+++.++||||+++++++.. ....++++
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv~ 78 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEE--NGNLYIVM 78 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecC--CCeEEEEE
Confidence 4899999999999999999998999999999997655545556678889999999999999999998876 45699999
Q ss_pred ecccc-cHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 197 HYMEH-DLAGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 197 e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
||+.+ .+...+.. ....+++..+..++.|++.||.|||+.+++|+||+|+|||++.++.++|+|||++........ .
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~ 157 (256)
T cd08218 79 DYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE-L 157 (256)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh-h
Confidence 99987 45554433 334689999999999999999999999999999999999999999999999999987643322 1
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
.....+++.|+|||++.+.. ++.++|+|||||++|+|++|+.||...+..+....+......
T Consensus 158 ~~~~~~~~~~~~pe~~~~~~-~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~----------------- 219 (256)
T cd08218 158 ARTCIGTPYYLSPEICENRP-YNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYP----------------- 219 (256)
T ss_pred hhhccCCccccCHHHhCCCC-CCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCC-----------------
Confidence 22346788999999987654 888999999999999999999999877766665555332110
Q ss_pred CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
.....++.++.++|.+||+.||.+||++.++|+||||
T Consensus 220 -----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 220 -----------PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred -----------CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 0112567789999999999999999999999999998
No 198
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=4.5e-43 Score=324.97 Aligned_cols=259 Identities=26% Similarity=0.410 Sum_probs=208.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC---ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL---EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~ 192 (406)
.+|++.+.||+|+||.||.|.+..+|..||+|.+..... .......+.+|+.++++++||||+++++++.+.....+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 579999999999999999999989999999999865432 23345678889999999999999999998877655678
Q ss_pred EEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC
Q 015455 193 YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK 272 (406)
Q Consensus 193 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~ 272 (406)
+++|||++++.+.........+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||++........
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~ 161 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL 161 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccc
Confidence 99999998765554444445689999999999999999999999999999999999999999999999999986542211
Q ss_pred --CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 273 --HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 273 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
.......++..|+|||++.+.. ++.++|||||||++|+|++|+.||...........+.. .+..
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~~~---------- 227 (265)
T cd06652 162 SGTGMKSVTGTPYWMSPEVISGEG-YGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT---QPTN---------- 227 (265)
T ss_pred cccccccCCCCccccChhhhcCCC-CCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhc---CCCC----------
Confidence 1123346889999999987644 88999999999999999999999987655444433221 1100
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSY 403 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~ 403 (406)
......++..+.++|.+|+. +|.+|||++++++|||+.
T Consensus 228 --------------~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 228 --------------PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred --------------CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 00112456678999999995 999999999999999984
No 199
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-46 Score=332.19 Aligned_cols=255 Identities=25% Similarity=0.448 Sum_probs=213.0
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
+-|.++.+||+|+||.||++.++.+|+.+|||.+..+ .....+..|+.+|.+.+.|++|++||.+... ..+|+|
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~--sDLWIV 106 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKH--SDLWIV 106 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhccC--CceEee
Confidence 4689999999999999999999999999999998654 2456678899999999999999999987663 349999
Q ss_pred Eecccc-cHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 196 FHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 196 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
||||+. +..+.+..++++++++++..+++..++||+|||...-||||||+.|||++.+|+.||+|||.|-.+..... .
T Consensus 107 MEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMA-K 185 (502)
T KOG0574|consen 107 MEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMA-K 185 (502)
T ss_pred hhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHH-h
Confidence 999985 55666677888999999999999999999999999999999999999999999999999999987753322 2
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
.....|||.|||||++..-. |+.++||||||++..||..|++||.+..+...+- -.-..|+.
T Consensus 186 RNTVIGTPFWMAPEVI~EIG-Y~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF---MIPT~PPP-------------- 247 (502)
T KOG0574|consen 186 RNTVIGTPFWMAPEVIEEIG-YDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF---MIPTKPPP-------------- 247 (502)
T ss_pred hCccccCcccccHHHHHHhc-cchhhhHhhhcchhhhhhcCCCCcccccccceeE---eccCCCCC--------------
Confidence 45678999999999997644 9999999999999999999999998765533221 11111111
Q ss_pred CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.++. +...+.++.|||++||.+.|++|.||.++++|||++.
T Consensus 248 ----TF~K-----PE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~Fikn 288 (502)
T KOG0574|consen 248 ----TFKK-----PEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKN 288 (502)
T ss_pred ----CCCC-----hHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcC
Confidence 0100 1235778999999999999999999999999999874
No 200
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=4.2e-43 Score=325.05 Aligned_cols=256 Identities=25% Similarity=0.427 Sum_probs=207.9
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC----ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL----EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~ 192 (406)
+|.+.+.||.|+||.||+|.+ .+|+.+|+|.+..... .......+.+|++++++++|+||+++++++.+. ...
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~ 77 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD--NTI 77 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC--CeE
Confidence 477889999999999999985 6889999999875432 223345688899999999999999999998874 579
Q ss_pred EEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC-
Q 015455 193 YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH- 271 (406)
Q Consensus 193 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~- 271 (406)
++++||+.++.+..+......+++..++.++.|++.||+|||+.+|+|+||+|+||+++.++.++|+|||++.......
T Consensus 78 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 78 SIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL 157 (265)
T ss_pred EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence 9999999886666555555578999999999999999999999999999999999999999999999999998653211
Q ss_pred ----CCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcC
Q 015455 272 ----KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347 (406)
Q Consensus 272 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 347 (406)
........++..|+|||++.+.. ++.++|+|||||++|+|++|..||...+.......+....+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--------- 227 (265)
T cd06631 158 HGTHSNMLKSMHGTPYWMAPEVINESG-YGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLM--------- 227 (265)
T ss_pred cccccccccccCCCccccChhhhcCCC-CcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCC---------
Confidence 11123456899999999987654 8899999999999999999999998766554443332211110
Q ss_pred CCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 348 LPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
......++.++.++|++||+.||.+|||+.++|+||||
T Consensus 228 -----------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 228 -----------------PRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred -----------------CCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 01113567889999999999999999999999999997
No 201
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=6.7e-43 Score=331.09 Aligned_cols=255 Identities=29% Similarity=0.480 Sum_probs=211.6
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
..|++.+.||+|+||.||+|.+..+|+.||+|.+..... .......+.+|+++++.++||||+++++++... ...|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--~~~~l 92 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLRE--HTAWL 92 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeC--CeEEE
Confidence 569999999999999999999888999999999865432 344456788899999999999999999999874 45899
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
||||+.+++...+......+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 93 v~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~---- 168 (307)
T cd06607 93 VMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA---- 168 (307)
T ss_pred EHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC----
Confidence 9999999888877665667999999999999999999999999999999999999999999999999998765432
Q ss_pred CcCccccCcccccccccC--CccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 275 MTSRVVTLWYRPPELLLG--ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~--~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
....+++.|+|||++.+ ...++.++||||||+++|+|++|.+||.+.+.......+... ..+. .
T Consensus 169 -~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~-~~~~--------~---- 234 (307)
T cd06607 169 -NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-DSPT--------L---- 234 (307)
T ss_pred -CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC-CCCC--------C----
Confidence 23567889999998742 234788999999999999999999999887665544333211 0000 0
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.....+..+.++|.+||+.||.+|||+.+++.||||..
T Consensus 235 --------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 272 (307)
T cd06607 235 --------------SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLR 272 (307)
T ss_pred --------------CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 00135667899999999999999999999999999964
No 202
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-44 Score=330.36 Aligned_cols=280 Identities=25% Similarity=0.425 Sum_probs=223.2
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCC------CCeeeEeeeeeecC
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH------PNVIKLEGLVTSRM 188 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~l~~~~~~~~ 188 (406)
.++|.++..+|+|.||.|-.+.+..++..||||+++.-. ...+.-.-|+++|.++.+ --+|++.++|..
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~---kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdy-- 162 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD---KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDY-- 162 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH---HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhc--
Confidence 478999999999999999999999999999999986322 233344459999999942 236777788877
Q ss_pred CceEEEEEecccccHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcC---------------
Q 015455 189 SCSLYLVFHYMEHDLAGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD--------------- 252 (406)
Q Consensus 189 ~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~--------------- 252 (406)
.++.++|+|.++.++.+.+.. .-.+++...++.+++|++.++++||+.+++|.||||+|||+..
T Consensus 163 rghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~ 242 (415)
T KOG0671|consen 163 RGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCF 242 (415)
T ss_pred cCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccce
Confidence 456999999999888887765 4568999999999999999999999999999999999999842
Q ss_pred -----CCcEEEeeeccccccCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHH
Q 015455 253 -----DGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQ 327 (406)
Q Consensus 253 -----~~~~kl~DFgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~ 327 (406)
+..|+|+|||.|....... +..+.|..|+|||++++.+ ++.++||||+||||+|+.+|..+|.+.++.+.
T Consensus 243 ~r~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRHYRAPEViLgLG-wS~pCDvWSiGCIL~ElytG~~LFqtHen~EH 317 (415)
T KOG0671|consen 243 IRPLKSTAIKVIDFGSATFDHEHH----STIVSTRHYRAPEVILGLG-WSQPCDVWSIGCILVELYTGETLFQTHENLEH 317 (415)
T ss_pred eccCCCcceEEEecCCcceeccCc----ceeeeccccCCchheeccC-cCCccCceeeeeEEEEeeccceecccCCcHHH
Confidence 2368999999998764432 5667899999999999976 99999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCHHHhhhc---------C--CCCcccC-------CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCC
Q 015455 328 LHKIYKLCGSPSEEYWKKS---------K--LPNATLF-------KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAE 389 (406)
Q Consensus 328 ~~~i~~~~~~~~~~~~~~~---------~--~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 389 (406)
+..|...+|++|..+.... + +++.... .+..+....+... ..-...+.|||++||..||.+
T Consensus 318 LaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~-d~e~~~LfDLl~~mL~fDP~~ 396 (415)
T KOG0671|consen 318 LAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQD-DLEHVQLFDLLRRMLEFDPAR 396 (415)
T ss_pred HHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccC-cHHHhHHHHHHHHHHccCccc
Confidence 9999999998888765544 1 1111111 1111111111000 011124899999999999999
Q ss_pred CcCHHHHhcCcccccc
Q 015455 390 RLTATVALNSEVSYQF 405 (406)
Q Consensus 390 Rpta~elL~h~~f~~~ 405 (406)
|+|+.|+|.||||+..
T Consensus 397 RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 397 RITLREALSHPFFARL 412 (415)
T ss_pred cccHHHHhcCHHhhcC
Confidence 9999999999999864
No 203
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.3e-43 Score=326.80 Aligned_cols=259 Identities=27% Similarity=0.414 Sum_probs=207.9
Q ss_pred ccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecC----
Q 015455 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRM---- 188 (406)
Q Consensus 114 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~---- 188 (406)
..++|++.+.||+|+||.||+|.+..+++.|++|++..... ....+.+|+.+++++ +|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED---EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 34889999999999999999999988899999999876542 345678899999999 7999999999987643
Q ss_pred CceEEEEEecccccHHHHhc----CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccc
Q 015455 189 SCSLYLVFHYMEHDLAGLAA----SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA 264 (406)
Q Consensus 189 ~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla 264 (406)
...+|++|||++++.+..+. ..+..+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence 45689999999985444332 22468999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCcCccccCcccccccccCC----ccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Q 015455 265 SFFDPNHKHPMTSRVVTLWYRPPELLLGA----TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340 (406)
Q Consensus 265 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 340 (406)
........ ......++..|+|||++... ..++.++|||||||++|+|++|+.||...........+... +..
T Consensus 161 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~ 236 (275)
T cd06608 161 AQLDSTLG-RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN---PPP 236 (275)
T ss_pred eecccchh-hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhcc---CCC
Confidence 76543322 22345689999999987532 33678999999999999999999999876555444443221 100
Q ss_pred HHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 341 EYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
. . .....+++.+.+||.+||..||++|||+.++++|||+
T Consensus 237 ~-----------~------------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 237 T-----------L------------KSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred C-----------C------------CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 0 0 0011356789999999999999999999999999996
No 204
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=6.7e-43 Score=326.75 Aligned_cols=280 Identities=36% Similarity=0.625 Sum_probs=225.1
Q ss_pred cceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCC-CCCeeeEeeeeeecCCceEEEEE
Q 015455 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD-HPNVIKLEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 118 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~l~~~~~~~~~~~~~lv~ 196 (406)
|++.+.||+|+||+||+|+...+++.||||.+....... ......+|+..+++++ |+|++++++++.. ....+++|
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~--~~~~~lv~ 77 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSW-EECMNLREVKSLRKLNEHPNIVKLKEVFRE--NDELYFVF 77 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccch-hHHHHHHHHHHHHhccCCCCchhHHHHhhc--CCcEEEEE
Confidence 678899999999999999988889999999986543222 2233456999999998 9999999999887 45689999
Q ss_pred ecccccHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 197 HYMEHDLAGLAASPE-VKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 197 e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
||+++++...+.... ..+++..+..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||++........ .
T Consensus 78 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~--~ 155 (283)
T cd07830 78 EYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP--Y 155 (283)
T ss_pred ecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC--c
Confidence 999888877665543 5789999999999999999999999999999999999999999999999999987643322 2
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCC
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFK 355 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 355 (406)
....++..|+|||++.+...++.++|+||||+++|+|++|++||++.+..+.+..+....+.+....|.....-......
T Consensus 156 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd07830 156 TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGF 235 (283)
T ss_pred CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccc
Confidence 34567889999998866555889999999999999999999999999999999999998888877655443211111100
Q ss_pred -CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 356 -PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 356 -~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
........+....+..++.+.+||++||+.||.+|||+.|++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 236 RFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred cccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 00001111223334457789999999999999999999999999997
No 205
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=8.4e-43 Score=321.01 Aligned_cols=253 Identities=27% Similarity=0.445 Sum_probs=210.6
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~ 196 (406)
+|++.+.||+|+||.||++.+..+++.+|+|.+............+.+|+++++.++|||++++++.+.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLE--DKALMIVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEec--CCEEEEEE
Confidence 4889999999999999999998999999999998766555566788899999999999999999998876 45699999
Q ss_pred eccccc-HHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCC-cEEEeeeccccccCCCCCC
Q 015455 197 HYMEHD-LAGLAASP-EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 197 e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-~~kl~DFgla~~~~~~~~~ 273 (406)
||++++ +.+.+... ...+++..++.++.|++.||.|||++|++|+||+|+||+++.++ .++|+|||++........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~- 157 (256)
T cd08220 79 EYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK- 157 (256)
T ss_pred ecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc-
Confidence 999874 44444433 34689999999999999999999999999999999999998654 589999999987653322
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
.....++..|+|||.+.+.. ++.++||||||+++|+|++|+.||.+.+.......+......+
T Consensus 158 -~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 220 (256)
T cd08220 158 -AYTVVGTPCYISPELCEGKP-YNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAP--------------- 220 (256)
T ss_pred -ccccccCCcccCchhccCCC-CCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCC---------------
Confidence 23456789999999987654 8889999999999999999999998877666555543311100
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
....+++++.++|..||+.||.+|||+.++|+||||
T Consensus 221 -------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 221 -------------ISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred -------------CCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 112467889999999999999999999999999997
No 206
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-45 Score=343.22 Aligned_cols=252 Identities=24% Similarity=0.389 Sum_probs=216.3
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEecccc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH 201 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~ 201 (406)
+.||+|.||+||-|+++.+|+.||||+|.+-.........+.+|+.||..+.||.||.+.-.|+.. ..+++|||-+.|
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~--ervFVVMEKl~G 647 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETP--ERVFVVMEKLHG 647 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCC--ceEEEEehhhcc
Confidence 689999999999999999999999999998877666668899999999999999999998777774 459999999999
Q ss_pred cHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCC---CcEEEeeeccccccCCCCCCCCcC
Q 015455 202 DLAGLAA-SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDD---GVLKIADFGLASFFDPNHKHPMTS 277 (406)
Q Consensus 202 ~l~~~~~-~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~---~~~kl~DFgla~~~~~~~~~~~~~ 277 (406)
+.+..+. ...+.+++...+.++.||+.||.|||.+||+|+||||+|||+... ..+||||||+|+++++... ..+
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF--Rrs 725 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF--RRS 725 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhh--hhh
Confidence 9998765 456789999999999999999999999999999999999999654 4799999999999975443 567
Q ss_pred ccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCC
Q 015455 278 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPR 357 (406)
Q Consensus 278 ~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (406)
.+|||.|+|||++.... |+..-|+||.|||+|.-++|..||....+ .-..|.......+.+
T Consensus 726 VVGTPAYLaPEVLrnkG-yNrSLDMWSVGVIiYVsLSGTFPFNEdEd--IndQIQNAaFMyPp~---------------- 786 (888)
T KOG4236|consen 726 VVGTPAYLAPEVLRNKG-YNRSLDMWSVGVIIYVSLSGTFPFNEDED--INDQIQNAAFMYPPN---------------- 786 (888)
T ss_pred hcCCccccCHHHHhhcc-ccccccceeeeEEEEEEecccccCCCccc--hhHHhhccccccCCC----------------
Confidence 89999999999998755 99999999999999999999999975432 223333322222221
Q ss_pred CchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 358 EPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
.++.+++.++|||..+|+..-.+|.|.+..|.|||++.+
T Consensus 787 ---------PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y 825 (888)
T KOG4236|consen 787 ---------PWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDY 825 (888)
T ss_pred ---------chhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence 235789999999999999999999999999999999864
No 207
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=9.9e-43 Score=327.22 Aligned_cols=259 Identities=29% Similarity=0.432 Sum_probs=206.7
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecC---Cc
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRM---SC 190 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~---~~ 190 (406)
.++|++.+.||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.++.++ +|||++++++++.... ..
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 97 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS---DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGG 97 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc---cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCC
Confidence 478999999999999999999998999999999986432 2234567799999998 8999999999986532 24
Q ss_pred eEEEEEecccccHHH-Hhc---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccc
Q 015455 191 SLYLVFHYMEHDLAG-LAA---SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASF 266 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~-~~~---~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~ 266 (406)
..|++|||++++.+. .+. .....+++..++.++.|++.||.|||+.|++|+||||+||+++.++.+||+|||++..
T Consensus 98 ~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~ 177 (291)
T cd06639 98 QLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQ 177 (291)
T ss_pred eeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchh
Confidence 689999999875444 332 2445789999999999999999999999999999999999999999999999999987
Q ss_pred cCCCCCCCCcCccccCcccccccccCCc----cCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 015455 267 FDPNHKHPMTSRVVTLWYRPPELLLGAT----DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEY 342 (406)
Q Consensus 267 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 342 (406)
....... .....++..|+|||.+.... .++.++|||||||++|+|++|++||...+....+..+.+. ...
T Consensus 178 ~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~---~~~-- 251 (291)
T cd06639 178 LTSTRLR-RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRN---PPP-- 251 (291)
T ss_pred ccccccc-ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcC---CCC--
Confidence 6433221 23356789999999875432 2678999999999999999999999887665554443221 000
Q ss_pred hhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccc
Q 015455 343 WKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSY 403 (406)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~ 403 (406)
. . ......+..+.+||.+||+.||.+|||+.++|+||||+
T Consensus 252 -------~--~------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 252 -------T--L------------LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred -------C--C------------CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 0 0 00123456789999999999999999999999999995
No 208
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=3.4e-43 Score=326.21 Aligned_cols=251 Identities=18% Similarity=0.253 Sum_probs=202.6
Q ss_pred CCcceeeeeccCCceEEEEEEEc---cCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDM---LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~ 192 (406)
++|++.+.||+|+||.||+|... ..+..||+|.++... .......+.+|+.++..++||||+++++++... ...
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~ 81 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC-SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRG--NTM 81 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecC--CCc
Confidence 57999999999999999999764 345689999987543 334456788899999999999999999998764 469
Q ss_pred EEEEecccccHHHHh-cCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC
Q 015455 193 YLVFHYMEHDLAGLA-ASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 193 ~lv~e~~~~~l~~~~-~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~ 271 (406)
++||||++++.+..+ ......+++..++.++.||+.||+|||+.|++||||||+|||++.++.++++|||.+.......
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~ 161 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA 161 (266)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence 999999998766544 4445679999999999999999999999999999999999999999999999999876543222
Q ss_pred CCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 272 KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 272 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
........++..|+|||.+.+. .++.++|||||||++|||++ |..||.+.+..+....+.+....+
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~------------ 228 (266)
T cd05064 162 IYTTMSGKSPVLWAAPEAIQYH-HFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLP------------ 228 (266)
T ss_pred hhcccCCCCceeecCHHHHhhC-CccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCC------------
Confidence 1111223446789999988764 48999999999999999775 999999888777666553321111
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
....++..+.+++..||+.||.+|||+.++++
T Consensus 229 ----------------~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 229 ----------------APRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred ----------------CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 01356788999999999999999999999876
No 209
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=6.2e-43 Score=322.98 Aligned_cols=257 Identities=29% Similarity=0.463 Sum_probs=209.6
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.+.||.|+||.||+|.+..+++.+|+|.+..... .....+.+|+.+++.++||||+++++++.. ...+|++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~l~ 78 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG--DDFEIIQQEISMLKECRHPNIVAYFGSYLR--RDKLWIV 78 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch--hhHHHHHHHHHHHHhCCCCChhceEEEEEe--CCEEEEE
Confidence 689999999999999999999988899999999976542 245678889999999999999999998877 4569999
Q ss_pred EecccccHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 196 FHYMEHDLAGLAA-SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 196 ~e~~~~~l~~~~~-~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
|||++++.+..+. .....+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++........ .
T Consensus 79 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-~ 157 (262)
T cd06613 79 MEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA-K 157 (262)
T ss_pred EeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhh-c
Confidence 9999986655444 4446899999999999999999999999999999999999999999999999999987653321 1
Q ss_pred CcCccccCcccccccccCC--ccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 275 MTSRVVTLWYRPPELLLGA--TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~--~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
.....++..|+|||.+.+. ..++.++|+|||||++|+|++|.+||.+.+.......+......+..
T Consensus 158 ~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~------------ 225 (262)
T cd06613 158 RKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPK------------ 225 (262)
T ss_pred cccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCcc------------
Confidence 2345678899999988654 24788999999999999999999999887765554433221000000
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEV 401 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~ 401 (406)
......++.++.+||++||..||.+|||+.+++.|+|
T Consensus 226 ------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 226 ------------LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred ------------ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 0001235667899999999999999999999999998
No 210
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.6e-43 Score=332.44 Aligned_cols=256 Identities=26% Similarity=0.452 Sum_probs=208.3
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
.+|++.+.||+|+||.||+|.+..+++.||+|.+...... ..+.+.+|+.+++.++|+||+++++++.. ....|+|
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~lv 94 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLV--GDELWVV 94 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEec--CCEEEEe
Confidence 6899999999999999999999899999999998765432 34567789999999999999999999887 4569999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
|||++++.+..+... ..+++.++..++.|++.||.|||+.|++||||||+|||++.++.++|+|||++......... .
T Consensus 95 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~-~ 172 (297)
T cd06656 95 MEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-R 172 (297)
T ss_pred ecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccC-c
Confidence 999987655544332 36899999999999999999999999999999999999999999999999999876433321 2
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCC
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFK 355 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 355 (406)
....+++.|+|||.+.+. .++.++|+|||||++|+|++|..||.+.+.......+.. .+.+..
T Consensus 173 ~~~~~~~~y~aPE~~~~~-~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~-~~~~~~--------------- 235 (297)
T cd06656 173 STMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPEL--------------- 235 (297)
T ss_pred CcccCCccccCHHHHcCC-CCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc-CCCCCC---------------
Confidence 345688999999988764 488999999999999999999999987654333222111 011100
Q ss_pred CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 356 PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.....+++.+.+||.+||..||.+|||+.++|.||||+.
T Consensus 236 ----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 274 (297)
T cd06656 236 ----------QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKL 274 (297)
T ss_pred ----------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcc
Confidence 011246677899999999999999999999999999975
No 211
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=3.8e-43 Score=325.68 Aligned_cols=260 Identities=30% Similarity=0.515 Sum_probs=208.2
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC----ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL----EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~ 192 (406)
+|+..+.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+.++++++|+||+++++++.+. ...
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~ 78 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCED--SHF 78 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccC--CeE
Confidence 47888999999999999999989999999999875432 123456788999999999999999999998764 468
Q ss_pred EEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCC-cEEEeeeccccccCCCC
Q 015455 193 YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNH 271 (406)
Q Consensus 193 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-~~kl~DFgla~~~~~~~ 271 (406)
++++||+.++.+..+......+++..+..++.||+.||.|||++|++|+||+|+||+++.++ .++|+|||++.......
T Consensus 79 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~ 158 (268)
T cd06630 79 NLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKG 158 (268)
T ss_pred EEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccc
Confidence 99999999876665555556899999999999999999999999999999999999998776 59999999998765332
Q ss_pred CC---CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCC
Q 015455 272 KH---PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348 (406)
Q Consensus 272 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 348 (406)
.. ......++..|+|||.+.+. .++.++|+||+|+++|+|++|..||...........+.+......
T Consensus 159 ~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------- 228 (268)
T cd06630 159 TGAGEFQGQLLGTIAFMAPEVLRGE-QYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATT--------- 228 (268)
T ss_pred ccCCccccccccccceeCHhHhccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCC---------
Confidence 11 12234678999999998764 488999999999999999999999976554333333322110000
Q ss_pred CCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccc
Q 015455 349 PNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSY 403 (406)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~ 403 (406)
.......+++++.++|.+||..||.+|||+.++|+||||+
T Consensus 229 ---------------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 229 ---------------APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred ---------------CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 0011125678899999999999999999999999999985
No 212
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-43 Score=336.28 Aligned_cols=266 Identities=25% Similarity=0.327 Sum_probs=195.7
Q ss_pred ccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEE
Q 015455 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 114 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~ 193 (406)
.+++|...+.||+|+||.||+|.. .+|+.||||++.....+. ...|.+|++++.+++|||+|+|+|||.+... ..+
T Consensus 73 AT~~Fs~~~~ig~Ggfg~VYkG~l-~~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~-~~~ 148 (361)
T KOG1187|consen 73 ATNNFSESNLIGEGGFGTVYKGVL-SDGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYCLEGGE-HRL 148 (361)
T ss_pred HHhCCchhcceecCCCeEEEEEEE-CCCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEEecCCc-eEE
Confidence 458899999999999999999984 677999999876554332 3449999999999999999999999997542 589
Q ss_pred EEEecccccHH-HHhcCCCC-CCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCCCCCeEEcCCCcEEEeeeccccccC
Q 015455 194 LVFHYMEHDLA-GLAASPEV-KFTEPQVKCYMHQLLSGLEHCHNNG---VLHRDIKGSNLLIDDDGVLKIADFGLASFFD 268 (406)
Q Consensus 194 lv~e~~~~~l~-~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFgla~~~~ 268 (406)
+|+|||..+.+ +.+..... .++|..+.+|+.++|.||+|||+.. ||||||||+|||||+++++||+|||+|+...
T Consensus 149 LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~ 228 (361)
T KOG1187|consen 149 LVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGP 228 (361)
T ss_pred EEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCC
Confidence 99999997555 44444444 8999999999999999999999963 9999999999999999999999999997654
Q ss_pred CCCCCCCcCc-cccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHhCCCCHHHhh
Q 015455 269 PNHKHPMTSR-VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRT---EVEQLHKIYKLCGSPSEEYWK 344 (406)
Q Consensus 269 ~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~ 344 (406)
..... .... .||.+|+|||++... ..+.++|||||||+|+||+||+.+..... ......-............+-
T Consensus 229 ~~~~~-~~~~~~gt~gY~~PEy~~~g-~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eii 306 (361)
T KOG1187|consen 229 EGDTS-VSTTVMGTFGYLAPEYASTG-KLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIV 306 (361)
T ss_pred ccccc-eeeecCCCCccCChhhhccC-CcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhhee
Confidence 31111 1222 899999999998764 48999999999999999999998876532 111111111111111100000
Q ss_pred hcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 345 KSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
+..+.. ..+... ..-..+..+...|++.+|.+||++.+++.
T Consensus 307 D~~l~~-------~~~~~~------~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 307 DPRLKE-------GEYPDE------KEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred CCCccC-------CCCChH------HHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 000000 000000 00112677889999999999999999754
No 213
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=6.8e-43 Score=326.75 Aligned_cols=256 Identities=25% Similarity=0.432 Sum_probs=204.8
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeec----CCc
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSR----MSC 190 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~----~~~ 190 (406)
+.|++.+.||.|+||.||+|++..+++.||+|.+.... .....+..|+.++.++ +|+||+++++++... ...
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 92 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDD 92 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCC
Confidence 67999999999999999999999999999999986542 3345577899999998 799999999988532 245
Q ss_pred eEEEEEeccccc-HHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccC
Q 015455 191 SLYLVFHYMEHD-LAGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD 268 (406)
Q Consensus 191 ~~~lv~e~~~~~-l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~ 268 (406)
..|++|||++++ +...+.. ....+++..++.++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++....
T Consensus 93 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~ 172 (282)
T cd06636 93 QLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 172 (282)
T ss_pred EEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhh
Confidence 789999999875 4444432 34568899999999999999999999999999999999999999999999999988654
Q ss_pred CCCCCCCcCccccCcccccccccC----CccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhh
Q 015455 269 PNHKHPMTSRVVTLWYRPPELLLG----ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344 (406)
Q Consensus 269 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 344 (406)
.... ......|++.|+|||.+.. ...++.++|+|||||++|+|++|..||...........+... ...
T Consensus 173 ~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~---~~~---- 244 (282)
T cd06636 173 RTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN---PPP---- 244 (282)
T ss_pred cccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhC---CCC----
Confidence 3222 2234578999999998752 234788999999999999999999999876544333322111 000
Q ss_pred hcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 345 KSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
......+++.+.+||.+||+.||.+|||+.++|.||||
T Consensus 245 --------------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 245 --------------------KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred --------------------CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 00012567889999999999999999999999999997
No 214
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=2.8e-44 Score=306.59 Aligned_cols=281 Identities=31% Similarity=0.562 Sum_probs=236.8
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCC-CCCeeeEeeeeeecCCceEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD-HPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~l~~~~~~~~~~~~~ 193 (406)
.++|++.+++|+|.|+.||.|....+.+.++||+++. -..+.+.+|+.||..|. ||||++++++..++.+....
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP-----VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa 111 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP-----VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS 111 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeech-----HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence 3789999999999999999999989999999999864 34667889999999996 99999999999988888889
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCC-CcEEEeeeccccccCCCCC
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDD-GVLKIADFGLASFFDPNHK 272 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~-~~~kl~DFgla~~~~~~~~ 272 (406)
+++||++......+-. .++...++.++.|+++||.|+|+.||+|||+||.|++||.. ..++|+|+|||.++.++..
T Consensus 112 LiFE~v~n~Dfk~ly~---tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~e 188 (338)
T KOG0668|consen 112 LIFEYVNNTDFKQLYP---TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188 (338)
T ss_pred hHhhhhccccHHHHhh---hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCce
Confidence 9999999855444433 67888999999999999999999999999999999999955 5699999999999876544
Q ss_pred CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCC-CCCChHHHHHHHHHHhCCCCH-HHhhhcCCC-
Q 015455 273 HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIM-PGRTEVEQLHKIYKLCGSPSE-EYWKKSKLP- 349 (406)
Q Consensus 273 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf-~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~- 349 (406)
..-.+.+..|-.||.+...+.|+..-|+|||||++..|++.+.|| .|.++.+++-+|.+.+|+..- .+...+...
T Consensus 189 --YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~L 266 (338)
T KOG0668|consen 189 --YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDL 266 (338)
T ss_pred --eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCC
Confidence 344566888999999988888999999999999999999988776 788999999999999997753 333333322
Q ss_pred -----CcccCCCCCchhhhhhhhcCCC-CCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 350 -----NATLFKPREPYKRCIQETFKDF-PPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 350 -----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
+.-....+.++.+++.....++ ++++.||+.++|.+|-++|+||.|++.||||...
T Consensus 267 dp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~ 328 (338)
T KOG0668|consen 267 DPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPV 328 (338)
T ss_pred ChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHH
Confidence 1122345566666766666665 5999999999999999999999999999999864
No 215
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=4.3e-43 Score=329.07 Aligned_cols=262 Identities=22% Similarity=0.342 Sum_probs=207.6
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCC-CCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD-HPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~l~~~~~~~~~~~~~l 194 (406)
++|+..+.||+|+||.||++++..+++.||+|.+...... .....+.+|+.++.++. |+||+++++++... ...++
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~--~~~~~ 80 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE--GDCWI 80 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC--CcEEE
Confidence 5688889999999999999999999999999998765433 44556788999999996 99999999988764 45889
Q ss_pred EEecccccHHHHh----cCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCCeEEcCCCcEEEeeeccccccCC
Q 015455 195 VFHYMEHDLAGLA----ASPEVKFTEPQVKCYMHQLLSGLEHCHNN-GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDP 269 (406)
Q Consensus 195 v~e~~~~~l~~~~----~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~ 269 (406)
+|||+..++.... ......+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++.....
T Consensus 81 ~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 81 CMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred EEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 9999987654432 22346799999999999999999999985 999999999999999999999999999976643
Q ss_pred CCCCCCcCccccCcccccccccCC--ccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcC
Q 015455 270 NHKHPMTSRVVTLWYRPPELLLGA--TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347 (406)
Q Consensus 270 ~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 347 (406)
... .....+++.|+|||++.+. ..++.++|||||||++|+|++|+.||.... .....+.+........
T Consensus 161 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~------ 230 (288)
T cd06616 161 SIA--KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN--SVFDQLTQVVKGDPPI------ 230 (288)
T ss_pred CCc--cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc--hHHHHHhhhcCCCCCc------
Confidence 222 2334678999999998765 358899999999999999999999997654 2222222221111000
Q ss_pred CCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 348 LPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
+ .......+++.+.+||..||+.||.+|||+.+++.||||+++
T Consensus 231 ~---------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~ 273 (288)
T cd06616 231 L---------------SNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDY 273 (288)
T ss_pred C---------------CCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhch
Confidence 0 001112477889999999999999999999999999999764
No 216
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=9.3e-43 Score=322.23 Aligned_cols=250 Identities=27% Similarity=0.383 Sum_probs=205.7
Q ss_pred eccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEeccccc
Q 015455 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD 202 (406)
Q Consensus 124 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~~ 202 (406)
||.|+||.||+|++..+++.||+|++..... .......+.+|+.+++.++||||+++++.+.+. ..+++++||++++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~ 78 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDK--KYIYMLMEYCLGG 78 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcC--CccEEEEecCCCC
Confidence 6999999999999988899999999976543 234456788999999999999999999988764 4589999999876
Q ss_pred HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCccccC
Q 015455 203 LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTL 282 (406)
Q Consensus 203 l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~gt~ 282 (406)
.+.....+...+++..+..++.||+.||.|||+.+++|+||+|+||+++.++.++|+|||++....... ......+++
T Consensus 79 ~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~ 156 (262)
T cd05572 79 ELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTFCGTP 156 (262)
T ss_pred cHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--ccccccCCc
Confidence 555555555578999999999999999999999999999999999999999999999999998775432 123456789
Q ss_pred cccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCch
Q 015455 283 WYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRT--EVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPY 360 (406)
Q Consensus 283 ~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (406)
.|+|||.+.+.. ++.++|+||||+++|+|++|..||.... ..+....+......+.
T Consensus 157 ~~~~PE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------- 214 (262)
T cd05572 157 EYVAPEIILNKG-YDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLE--------------------- 214 (262)
T ss_pred CccChhHhcCCC-CCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCC---------------------
Confidence 999999887644 8899999999999999999999998776 4344444332110000
Q ss_pred hhhhhhhcCCCCCChHHHHHHcccCCCCCCcC-----HHHHhcCcccccc
Q 015455 361 KRCIQETFKDFPPSSLPLIETLLAIDPAERLT-----ATVALNSEVSYQF 405 (406)
Q Consensus 361 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----a~elL~h~~f~~~ 405 (406)
.....++++.++|.+||+.||.+||| +.|+++||||+++
T Consensus 215 ------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 215 ------FPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred ------CCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence 01234788999999999999999999 9999999999875
No 217
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.7e-43 Score=326.07 Aligned_cols=255 Identities=27% Similarity=0.422 Sum_probs=208.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.+.||+|+||.||++.+..+++.||+|.+..... ......+.+|++++++++||||+++++.+... ...+++
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~~~lv 77 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYNN--GDISIC 77 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeecC--CEEEEE
Confidence 368889999999999999999988999999999876543 34556788899999999999999999988774 569999
Q ss_pred Eecccc-cHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 196 FHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN-NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 196 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
+||+++ ++.+.+......+++..+..++.|++.||+|||+ .|++|+||||+||+++.++.++|+|||++........
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 156 (265)
T cd06605 78 MEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA- 156 (265)
T ss_pred EEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh-
Confidence 999995 5555544444689999999999999999999999 9999999999999999999999999999876643222
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHhCCCCHHHhhhcCC
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRT-----EVEQLHKIYKLCGSPSEEYWKKSKL 348 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~ 348 (406)
....++..|+|||.+.+. .++.++||||||+++|+|++|..||.... ..+..+.+... ...
T Consensus 157 --~~~~~~~~y~~PE~~~~~-~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~-------- 222 (265)
T cd06605 157 --KTFVGTSSYMAPERIQGN-DYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE---PPP-------- 222 (265)
T ss_pred --hcccCChhccCHHHHcCC-CCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC---CCC--------
Confidence 126778899999998775 48999999999999999999999997652 12222222110 000
Q ss_pred CCcccCCCCCchhhhhhhhcC-CCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 349 PNATLFKPREPYKRCIQETFK-DFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
.... .+++.+.++|..||..||.+|||+.+++.||||+.+
T Consensus 223 -----------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 223 -----------------RLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred -----------------CCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 0001 167789999999999999999999999999999875
No 218
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.2e-44 Score=342.35 Aligned_cols=258 Identities=27% Similarity=0.455 Sum_probs=226.7
Q ss_pred ccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEE
Q 015455 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 114 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~ 193 (406)
....|.+...||+|.|++|.+|++..+|..||||.+++...+......+.+|+++|..|+|||||+++.+...+ ..+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~--~~ly 131 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETE--ATLY 131 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeec--ceeE
Confidence 44679999999999999999999999999999999999888887777899999999999999999999998874 4599
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
+||||+.++....+..+.+.+.+..++.++.|++.|++|||+++|+|||||++||||+.+.++||+|||++..+..+.
T Consensus 132 lV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~-- 209 (596)
T KOG0586|consen 132 LVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGL-- 209 (596)
T ss_pred EEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecccc--
Confidence 999999987777676667788889999999999999999999999999999999999999999999999999987443
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
...+.+|++.|.|||++.+....++.+|+||+|++||.|++|..||.|.+-.+.-..........+
T Consensus 210 ~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp-------------- 275 (596)
T KOG0586|consen 210 MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIP-------------- 275 (596)
T ss_pred cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeeccc--------------
Confidence 357889999999999999988778999999999999999999999998765544433332211111
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
--++-++.++|+++|..+|.+|++.+++..|.|...
T Consensus 276 ---------------~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~ 311 (596)
T KOG0586|consen 276 ---------------FYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRND 311 (596)
T ss_pred ---------------ceeechhHHHHHHhhccCccccCCHHHhhhhcccch
Confidence 146788999999999999999999999999999875
No 219
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=9.5e-43 Score=323.95 Aligned_cols=261 Identities=30% Similarity=0.520 Sum_probs=206.6
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC--------ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecC
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL--------EPESVKFMAREILILRRLDHPNVIKLEGLVTSRM 188 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--------~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~ 188 (406)
+|.+.+.||.|+||.||+|.+..+|+.||+|.++.... .....+.+.+|+.+++.++|||++++++++...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~- 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTE- 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccC-
Confidence 47788999999999999999888999999998864321 112234677899999999999999999988764
Q ss_pred CceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccC
Q 015455 189 SCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD 268 (406)
Q Consensus 189 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~ 268 (406)
...++||||+.++.+.........+++..++.++.||+.||.|||+.+++|+||+|+||+++.++.++|+|||++....
T Consensus 81 -~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 159 (272)
T cd06629 81 -EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSD 159 (272)
T ss_pred -CceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccc
Confidence 5689999999886555554444689999999999999999999999999999999999999999999999999997654
Q ss_pred CCCCC-CCcCccccCcccccccccCCc-cCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhc
Q 015455 269 PNHKH-PMTSRVVTLWYRPPELLLGAT-DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS 346 (406)
Q Consensus 269 ~~~~~-~~~~~~gt~~y~aPE~~~~~~-~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 346 (406)
..... ......++..|+|||.+.+.. .++.++|+||||+++|+|++|..||...+..+....+......+
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------- 231 (272)
T cd06629 160 DIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAP-------- 231 (272)
T ss_pred ccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCC--------
Confidence 32211 123346789999999886543 47889999999999999999999997655544333221110000
Q ss_pred CCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 347 KLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
.+ .....+.++..+.++|.+||.+||.+|||+.++|+||||
T Consensus 232 ~~---------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 232 PI---------------PPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred cC---------------CccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 00 011223578899999999999999999999999999997
No 220
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=2e-42 Score=319.88 Aligned_cols=259 Identities=29% Similarity=0.500 Sum_probs=210.4
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~ 196 (406)
+|++.+.||+|+||.||+|.+..+++.||+|.+............+.+|+++++.++|+||+++++.+.. ....++++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~~~lv~ 78 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVH--REKVYIFM 78 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEec--CCEEEEEE
Confidence 4889999999999999999988899999999998776555567788999999999999999999998776 45699999
Q ss_pred ecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCc
Q 015455 197 HYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMT 276 (406)
Q Consensus 197 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~ 276 (406)
||+.++.+.........+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.+||+|||++............
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~ 158 (264)
T cd06626 79 EYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGE 158 (264)
T ss_pred ecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccc
Confidence 99998666655555557899999999999999999999999999999999999999999999999999877543332111
Q ss_pred ---CccccCcccccccccCCc--cCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCc
Q 015455 277 ---SRVVTLWYRPPELLLGAT--DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351 (406)
Q Consensus 277 ---~~~gt~~y~aPE~~~~~~--~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 351 (406)
...++..|+|||++.+.. .++.++||||||+++|+|++|+.||............... +..+ .++
T Consensus 159 ~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~-------~~~-- 228 (264)
T cd06626 159 EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GHKP-------PIP-- 228 (264)
T ss_pred cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-CCCC-------CCC--
Confidence 346788999999987543 3788999999999999999999999766433222211111 1000 000
Q ss_pred ccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 352 TLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
....+++.+.+||..||+.||.+|||+.+++.|||+
T Consensus 229 ---------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 229 ---------------DSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred ---------------cccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 012457788999999999999999999999999997
No 221
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=5.9e-43 Score=322.01 Aligned_cols=253 Identities=28% Similarity=0.483 Sum_probs=207.9
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.+.||+|+||.||+|+...+++.||+|.+.... ....+.+|+.+++.++||||+++++++... ...|++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~~l~ 76 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE----DLQEIIKEISILKQCDSPYIVKYYGSYFKN--TDLWIV 76 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH----HHHHHHHHHHHHHhCCCCcEeeeeeeeecC--CcEEEE
Confidence 68999999999999999999988889999999986432 256788899999999999999999998874 569999
Q ss_pred EecccccHHH-HhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 196 FHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 196 ~e~~~~~l~~-~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
+||++++.+. .+......+++..++.++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++........ .
T Consensus 77 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~-~ 155 (256)
T cd06612 77 MEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA-K 155 (256)
T ss_pred EecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc-c
Confidence 9999975444 4444456889999999999999999999999999999999999999999999999999987654322 2
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
.....++..|+|||++.+. .++.++||||||+++|+|++|+.||...........+... ... .
T Consensus 156 ~~~~~~~~~y~~PE~~~~~-~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~---------~---- 218 (256)
T cd06612 156 RNTVIGTPFWMAPEVIQEI-GYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK---PPP---------T---- 218 (256)
T ss_pred cccccCCccccCHHHHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccC---CCC---------C----
Confidence 2344578999999998765 4889999999999999999999999876554433222110 000 0
Q ss_pred CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
......++..+.++|..||+.||.+|||+.++|+||||
T Consensus 219 ----------~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 219 ----------LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred ----------CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 00112466789999999999999999999999999997
No 222
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3.5e-43 Score=324.29 Aligned_cols=253 Identities=30% Similarity=0.423 Sum_probs=209.6
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
+|++.+.||.|+||.||+|.+..+++.||+|.+..... .....+.+.+|++++++++||||+++++++.. ....+++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 78 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQD--EENMYLV 78 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcC--CCeEEEE
Confidence 48899999999999999999988999999999976543 22456678899999999999999999988876 4569999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
+||+.++.+.........+++..+..++.||+.||.|||+.|++|+||+|+||++++++.++|+|||++....... ..
T Consensus 79 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--~~ 156 (258)
T cd05578 79 VDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT--LT 156 (258)
T ss_pred EeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc--cc
Confidence 9999886665555444689999999999999999999999999999999999999999999999999998765432 12
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEV--EQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
....++..|+|||.+.+.. ++.++|+||||+++|+|++|..||...+.. ..+...... .
T Consensus 157 ~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~--------------- 217 (258)
T cd05578 157 TSTSGTPGYMAPEVLCRQG-YSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET---A--------------- 217 (258)
T ss_pred cccCCChhhcCHHHHcccC-CCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc---c---------------
Confidence 3456788999999887654 899999999999999999999999877642 222111110 0
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCH--HHHhcCccc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTA--TVALNSEVS 402 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta--~elL~h~~f 402 (406)
........++.+.++|.+||..||.+||++ .++++||||
T Consensus 218 ----------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 218 ----------DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred ----------cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 001112567889999999999999999999 999999998
No 223
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.3e-42 Score=325.44 Aligned_cols=262 Identities=28% Similarity=0.446 Sum_probs=206.1
Q ss_pred CCcccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeee---
Q 015455 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTS--- 186 (406)
Q Consensus 111 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~--- 186 (406)
.+...++|++.+.||+|+||.||+|++..+++.||+|.+.... .....+.+|+.+++.+ +||||+++++++..
T Consensus 13 ~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 89 (286)
T cd06638 13 FPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH---DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDV 89 (286)
T ss_pred CCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc---chHHHHHHHHHHHHHHhcCCCeeeeeeeeeeccc
Confidence 3444589999999999999999999999999999999876432 1234567799999999 79999999998753
Q ss_pred cCCceEEEEEecccccHHH-Hh---cCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeec
Q 015455 187 RMSCSLYLVFHYMEHDLAG-LA---ASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFG 262 (406)
Q Consensus 187 ~~~~~~~lv~e~~~~~l~~-~~---~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFg 262 (406)
..+...+++|||++++.+. .+ ......+++..++.++.|++.||.|||+.+++||||||+||+++.++.++|+|||
T Consensus 90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg 169 (286)
T cd06638 90 KNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFG 169 (286)
T ss_pred CCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCC
Confidence 2345789999999875444 32 2344578999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcCccccCcccccccccC----CccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Q 015455 263 LASFFDPNHKHPMTSRVVTLWYRPPELLLG----ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338 (406)
Q Consensus 263 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~ 338 (406)
++........ ......|++.|+|||++.+ ...++.++|||||||++|+|++|+.||........+..+.... +
T Consensus 170 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~--~ 246 (286)
T cd06638 170 VSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNP--P 246 (286)
T ss_pred ceeecccCCC-ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccC--C
Confidence 9987643221 2234568999999998753 1337889999999999999999999998766544333221100 0
Q ss_pred CHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 339 SEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
+. . .....++..+.+||.+||+.||.+|||+.++|+|+||
T Consensus 247 ~~------------~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 247 PT------------L------------HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred Cc------------c------------cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 00 0 0011346679999999999999999999999999997
No 224
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=4.5e-43 Score=330.00 Aligned_cols=256 Identities=25% Similarity=0.420 Sum_probs=209.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
+.|.....||+|+||.||++.+..++..||||.+.... ....+.+.+|+.+++.++|+||+++++.+.. ....|++
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~--~~~~~lv 97 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHENVVDMYNSYLV--GDELWVV 97 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCCCcHHHHHHheec--CCeEEEE
Confidence 45666788999999999999988899999999986533 3345668889999999999999999998876 4568999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
|||++++.+..+... ..+++..++.++.||+.||.|||+.||+||||||+||+++.++.++|+|||++........ ..
T Consensus 98 ~e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~-~~ 175 (292)
T cd06658 98 MEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP-KR 175 (292)
T ss_pred EeCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc-cC
Confidence 999998766554433 3689999999999999999999999999999999999999999999999999976543222 22
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCC
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFK 355 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 355 (406)
....++..|+|||.+.+.. ++.++|+||||+++|||++|..||.+.+....+..+........
T Consensus 176 ~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~---------------- 238 (292)
T cd06658 176 KSLVGTPYWMAPEVISRLP-YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRV---------------- 238 (292)
T ss_pred ceeecCccccCHHHHccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCcc----------------
Confidence 3456899999999887644 88999999999999999999999998776665554433211000
Q ss_pred CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 356 PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.....+++.+.++|..||..||.+|||+.++|+||||..
T Consensus 239 ----------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~ 277 (292)
T cd06658 239 ----------KDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKL 277 (292)
T ss_pred ----------ccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhc
Confidence 001245777999999999999999999999999999974
No 225
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.1e-42 Score=318.51 Aligned_cols=255 Identities=29% Similarity=0.477 Sum_probs=208.7
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC---ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL---EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~ 193 (406)
+|+..+.||+|+||.||+|.+..++..|++|.+..... ..+..+.+.+|+.+++.++|+||+++++++... ..++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~ 78 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREE--DNLY 78 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecC--CeEE
Confidence 36778899999999999999888999999999875432 234556788899999999999999999988764 5689
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
+++||++++.+..+......+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.+||+|||++.......
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~-- 156 (258)
T cd06632 79 IFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS-- 156 (258)
T ss_pred EEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc--
Confidence 999999886555454455578999999999999999999999999999999999999999999999999998764332
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
......++..|+|||.+.....++.++|+|||||++|+|++|+.||...........+......
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~---------------- 220 (258)
T cd06632 157 FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKEL---------------- 220 (258)
T ss_pred cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccC----------------
Confidence 2344568999999998865444788999999999999999999999876644444333221100
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
......+++.+.++|.+||+.||.+|||+.++|.|||+
T Consensus 221 -----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 221 -----------PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred -----------CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 01112567889999999999999999999999999996
No 226
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.1e-42 Score=327.17 Aligned_cols=257 Identities=21% Similarity=0.274 Sum_probs=198.8
Q ss_pred CCcceeeeeccCCceEEEEEEEcc----------------CCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeee
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDML----------------TGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIK 179 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~----------------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 179 (406)
++|++.++||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.++..++||||++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 689999999999999999997532 34479999987543 3445567889999999999999999
Q ss_pred EeeeeeecCCceEEEEEeccccc-HHHHhcCC------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 015455 180 LEGLVTSRMSCSLYLVFHYMEHD-LAGLAASP------------------EVKFTEPQVKCYMHQLLSGLEHCHNNGVLH 240 (406)
Q Consensus 180 l~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~------------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH 240 (406)
+++++.+. ...+++|||+.++ +.+++... ...+++..+..++.||+.||.|||+.||+|
T Consensus 84 ~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH 161 (304)
T cd05096 84 LLGVCVDE--DPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVH 161 (304)
T ss_pred EEEEEecC--CceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 99999874 4589999999874 44433211 134788899999999999999999999999
Q ss_pred ccCCCCCeEEcCCCcEEEeeeccccccCCCCCC-CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh--CCC
Q 015455 241 RDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA--GKP 317 (406)
Q Consensus 241 rDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~--g~~ 317 (406)
|||||+|||++.++.+||+|||+++........ ......++..|+|||++.+.. ++.++|||||||++|+|++ +..
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~~~~~~ 240 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGK-FTTASDVWAFGVTLWEILMLCKEQ 240 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCC-CCchhhhHHHHHHHHHHHHccCCC
Confidence 999999999999999999999999865433221 122345578899999887654 8999999999999999986 567
Q ss_pred CCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHh
Q 015455 318 IMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397 (406)
Q Consensus 318 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL 397 (406)
||.+.+..+.+..+........... .....+.+++.+.+||..||+.||.+|||+.++.
T Consensus 241 p~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~ 299 (304)
T cd05096 241 PYGELTDEQVIENAGEFFRDQGRQV---------------------YLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIH 299 (304)
T ss_pred CCCcCCHHHHHHHHHHHhhhccccc---------------------cccCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence 8887776666555443221110000 0001135678899999999999999999999994
No 227
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=2.7e-42 Score=318.94 Aligned_cols=257 Identities=32% Similarity=0.451 Sum_probs=211.7
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.+.||+|++|.||+|++..+++.||+|++...... .....+.+|+.++.+++|+|++++++++... ...+++
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~lv 77 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKE--GEISIV 77 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccC--CeEEEE
Confidence 3689999999999999999999889999999998765432 4456788899999999999999999998774 569999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN-NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
|||++++.+.........+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.........
T Consensus 78 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~- 156 (264)
T cd06623 78 LEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ- 156 (264)
T ss_pred EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCc-
Confidence 9999975555444444689999999999999999999999 99999999999999999999999999999876543322
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHhCCCCHHHhhhcCCCCc
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRT---EVEQLHKIYKLCGSPSEEYWKKSKLPNA 351 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 351 (406)
.....++..|+|||.+.+. .++.++|+||||+++|+|++|..||.... ..+....+... ..
T Consensus 157 ~~~~~~~~~y~~pE~~~~~-~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~---~~------------ 220 (264)
T cd06623 157 CNTFVGTVTYMSPERIQGE-SYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDG---PP------------ 220 (264)
T ss_pred ccceeecccccCHhhhCCC-CCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcC---CC------------
Confidence 2345678999999988765 48899999999999999999999998774 22223322211 00
Q ss_pred ccCCCCCchhhhhhhhcCC-CCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 352 TLFKPREPYKRCIQETFKD-FPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
...... ++..+.++|..||+.+|++|||+.++++||||+++
T Consensus 221 -------------~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 221 -------------PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred -------------CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 000123 67889999999999999999999999999999763
No 228
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1e-42 Score=325.99 Aligned_cols=258 Identities=25% Similarity=0.374 Sum_probs=208.6
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++++.||+|+||+||++.+..+|+.||+|++.... .......+.+|+++++.++||||+++++++... ..+++|
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv 81 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLNE--NNICMC 81 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEecC--CEEEEE
Confidence 68999999999999999999998899999999987543 234456788999999999999999999998874 569999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN-NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
|||++++.+..+....+.+++..++.++.|++.||.|||+ .+++||||+|+||+++.++.++|+|||++.......
T Consensus 82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~--- 158 (284)
T cd06620 82 MEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI--- 158 (284)
T ss_pred EecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc---
Confidence 9999987666555555679999999999999999999997 599999999999999999999999999987553222
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHH--------HHHHHHHhCCCCHHHhhhc
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQ--------LHKIYKLCGSPSEEYWKKS 346 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~--------~~~i~~~~~~~~~~~~~~~ 346 (406)
.....++..|+|||++.+. .++.++|+|||||++|+|++|+.||......+. ...+.........
T Consensus 159 ~~~~~~~~~~~aPE~~~~~-~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 231 (284)
T cd06620 159 ADTFVGTSTYMSPERIQGG-KYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPP------ 231 (284)
T ss_pred cCccccCcccCCHHHHccC-CCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCC------
Confidence 2345789999999998765 488999999999999999999999986554211 1111110000000
Q ss_pred CCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 347 KLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.++ ...++..+.+||.+||++||.+|||+.|+++|+||.+
T Consensus 232 ~~~------------------~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 232 RLP------------------SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred CCC------------------chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 000 0136678999999999999999999999999999964
No 229
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.2e-42 Score=324.49 Aligned_cols=252 Identities=28% Similarity=0.420 Sum_probs=200.8
Q ss_pred eccCCceEEEEEEEccCCcEEEEEEEecCCCC-hHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEeccccc
Q 015455 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-PESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD 202 (406)
Q Consensus 124 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~~ 202 (406)
||+|+||+||+|.+..+|+.||+|.+...... ......+..|+++++.++||||+++++++... ...|++|||++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~lv~e~~~~~ 78 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETK--DDLCLVMTLMNGG 78 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecC--CeEEEEEecCCCC
Confidence 68999999999999899999999998754332 22344566799999999999999999988774 4689999999975
Q ss_pred HHH-HhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCccc
Q 015455 203 LAG-LAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280 (406)
Q Consensus 203 l~~-~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~g 280 (406)
.+. .+.. ....+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++....... ......+
T Consensus 79 ~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~ 156 (277)
T cd05577 79 DLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK--KIKGRAG 156 (277)
T ss_pred cHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC--ccccccC
Confidence 544 4333 22379999999999999999999999999999999999999999999999999998764321 2234567
Q ss_pred cCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCch
Q 015455 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPY 360 (406)
Q Consensus 281 t~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (406)
+..|+|||.+.+.. ++.++|+|||||++|+|++|+.||...........+.+.....
T Consensus 157 ~~~y~~PE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------- 213 (277)
T cd05577 157 TPGYMAPEVLQGEV-YDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEM---------------------- 213 (277)
T ss_pred CCCcCCHHHhcCCC-CCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccc----------------------
Confidence 88999999987655 8899999999999999999999998765422222222210000
Q ss_pred hhhhhhhcCCCCCChHHHHHHcccCCCCCCc-----CHHHHhcCcccccc
Q 015455 361 KRCIQETFKDFPPSSLPLIETLLAIDPAERL-----TATVALNSEVSYQF 405 (406)
Q Consensus 361 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----ta~elL~h~~f~~~ 405 (406)
.....+.+++.+.++|.+||+.||.+|| ++.++++||||.++
T Consensus 214 ---~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~ 260 (277)
T cd05577 214 ---AVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDL 260 (277)
T ss_pred ---cccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcC
Confidence 0011135688899999999999999999 99999999999753
No 230
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.3e-42 Score=324.63 Aligned_cols=250 Identities=27% Similarity=0.407 Sum_probs=195.6
Q ss_pred eeccCCceEEEEEEEccCCcEEEEEEEecCCCCh-HHHHHHHHHHHHH---hhCCCCCeeeEeeeeeecCCceEEEEEec
Q 015455 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEP-ESVKFMAREILIL---RRLDHPNVIKLEGLVTSRMSCSLYLVFHY 198 (406)
Q Consensus 123 ~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l---~~l~h~~iv~l~~~~~~~~~~~~~lv~e~ 198 (406)
.||+|+||.||++.+..+++.||+|.+....... .......+|..++ ...+|||++.+++++... ...++||||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~lv~e~ 78 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTP--DKLCFILDL 78 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecC--CeEEEEEec
Confidence 4899999999999998999999999987654321 1122233444333 344799999999888764 458999999
Q ss_pred ccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCc
Q 015455 199 MEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR 278 (406)
Q Consensus 199 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~ 278 (406)
+.++.+.........+++..+..++.|++.||.|||+.+|+||||||+|||+++++.++|+|||++....... ....
T Consensus 79 ~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---~~~~ 155 (279)
T cd05633 79 MNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PHAS 155 (279)
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC---ccCc
Confidence 9987666555555679999999999999999999999999999999999999999999999999997654322 2335
Q ss_pred cccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHHHhCCCCHHHhhhcCCCCcccCCC
Q 015455 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVE--QLHKIYKLCGSPSEEYWKKSKLPNATLFKP 356 (406)
Q Consensus 279 ~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (406)
.|++.|+|||.+.+...++.++|+||+||++|+|++|..||....... ....... ...
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~---~~~----------------- 215 (279)
T cd05633 156 VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL---TVN----------------- 215 (279)
T ss_pred CCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhh---cCC-----------------
Confidence 689999999988654458899999999999999999999997643221 1111110 000
Q ss_pred CCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCc-----CHHHHhcCcccccc
Q 015455 357 REPYKRCIQETFKDFPPSSLPLIETLLAIDPAERL-----TATVALNSEVSYQF 405 (406)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----ta~elL~h~~f~~~ 405 (406)
......+++++.++|.+||..||.+|| |+.++++||||+.+
T Consensus 216 --------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~ 261 (279)
T cd05633 216 --------VELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGI 261 (279)
T ss_pred --------cCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCC
Confidence 011135778899999999999999999 69999999999863
No 231
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.4e-42 Score=324.71 Aligned_cols=252 Identities=22% Similarity=0.356 Sum_probs=204.1
Q ss_pred CCcceeeeeccCCceEEEEEEEccCC-----cEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCc
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTG-----KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~ 190 (406)
++|++.+.||+|+||.||+|.+...+ ..||+|.+.... .......+.+|+.++..++||||+++++++... .
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~--~ 81 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA-EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE--Q 81 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC-CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC--C
Confidence 57999999999999999999876554 689999886443 344456788999999999999999999998764 4
Q ss_pred eEEEEEeccccc-HHHHhcCC---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCC
Q 015455 191 SLYLVFHYMEHD-LAGLAASP---------------EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDG 254 (406)
Q Consensus 191 ~~~lv~e~~~~~-l~~~~~~~---------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~ 254 (406)
..+++|||++++ +...+... ...+++..+..++.|++.||.|||+.|++|+||||+||+++.++
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGL 161 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCC
Confidence 589999999875 44443221 14688999999999999999999999999999999999999999
Q ss_pred cEEEeeeccccccCCCCC-CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 015455 255 VLKIADFGLASFFDPNHK-HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIY 332 (406)
Q Consensus 255 ~~kl~DFgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~ 332 (406)
.++|+|||++........ .......+++.|+|||.+.+.. ++.++|||||||++|||++ |..||.+.+..+....+.
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~ 240 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGK-FTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIR 240 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCc-CchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 999999999986543221 1223445688999999887654 8999999999999999998 999999887766655554
Q ss_pred HHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 333 KLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
..... .....+|+++.+|+..||+.||.+|||+.+++++
T Consensus 241 ~~~~~----------------------------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 241 SRQLL----------------------------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred cCCcC----------------------------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 32110 0113678899999999999999999999999864
No 232
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=2.7e-42 Score=322.35 Aligned_cols=252 Identities=26% Similarity=0.365 Sum_probs=197.3
Q ss_pred eeccCCceEEEEEEEccCCcEEEEEEEecCCCCh-HHHHHHHHHH---HHHhhCCCCCeeeEeeeeeecCCceEEEEEec
Q 015455 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEP-ESVKFMAREI---LILRRLDHPNVIKLEGLVTSRMSCSLYLVFHY 198 (406)
Q Consensus 123 ~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~---~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~ 198 (406)
.||+|+||.||+|++..+++.||+|.+....... ........|. ..++...||+|+.+++++... ...++||||
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~v~e~ 78 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP--DKLSFILDL 78 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecC--CEEEEEEec
Confidence 4899999999999998899999999987654321 1111223333 345556899999999988874 469999999
Q ss_pred ccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCc
Q 015455 199 MEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR 278 (406)
Q Consensus 199 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~ 278 (406)
+.++.+.........+++..++.++.|++.||.|||+.+++||||||+||+++.++.++|+|||++..+.... ....
T Consensus 79 ~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~---~~~~ 155 (278)
T cd05606 79 MNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PHAS 155 (278)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC---CcCc
Confidence 9987666555556689999999999999999999999999999999999999999999999999997654322 2345
Q ss_pred cccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCC
Q 015455 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPRE 358 (406)
Q Consensus 279 ~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (406)
.|+..|+|||++.+...++.++||||+||++|+|++|+.||.+.................
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------------------- 215 (278)
T cd05606 156 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA-------------------- 215 (278)
T ss_pred CCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccC--------------------
Confidence 789999999998765458899999999999999999999998763322111110000000
Q ss_pred chhhhhhhhcCCCCCChHHHHHHcccCCCCCCc-----CHHHHhcCcccccc
Q 015455 359 PYKRCIQETFKDFPPSSLPLIETLLAIDPAERL-----TATVALNSEVSYQF 405 (406)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----ta~elL~h~~f~~~ 405 (406)
.......++.+.++|.+||..||.+|| ++.++++||||+.+
T Consensus 216 ------~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~ 261 (278)
T cd05606 216 ------VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSL 261 (278)
T ss_pred ------CCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCC
Confidence 011124678899999999999999999 99999999999864
No 233
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=6.8e-43 Score=325.98 Aligned_cols=256 Identities=26% Similarity=0.447 Sum_probs=208.5
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
+.|+..+.||+|+||.||+|.+..++..||+|.+..... ......+.+|+.+++.++||||+++++.+... ...|+|
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv 80 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYITRYYGSYLKG--TKLWII 80 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc-hHHHHHHHHHHHHHHcCCCCccHhhhcccccC--CceEEE
Confidence 468889999999999999999888999999999875432 23456788899999999999999999998764 468999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
|||++++.+...... ..+++..++.++.|++.||.|||+.|++|+||+|+||++++++.++|+|||++........ ..
T Consensus 81 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-~~ 158 (277)
T cd06642 81 MEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-KR 158 (277)
T ss_pred EEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcch-hh
Confidence 999998655544433 4789999999999999999999999999999999999999999999999999987643321 12
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCC
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFK 355 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 355 (406)
....++..|+|||++.+.. ++.++|+|||||++|+|++|+.||...........+.... +
T Consensus 159 ~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~--~----------------- 218 (277)
T cd06642 159 NTFVGTPFWMAPEVIKQSA-YDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNS--P----------------- 218 (277)
T ss_pred hcccCcccccCHHHhCcCC-CchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCC--C-----------------
Confidence 3346788999999987654 8899999999999999999999997665444333221100 0
Q ss_pred CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 356 PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
......++..+.++|.+||+.+|.+|||+.++|+||||..+
T Consensus 219 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06642 219 ---------PTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRY 259 (277)
T ss_pred ---------CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHH
Confidence 00112456779999999999999999999999999999754
No 234
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.3e-42 Score=322.16 Aligned_cols=256 Identities=27% Similarity=0.489 Sum_probs=207.7
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCC---CCCeeeEeeeeeecCCceEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD---HPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~l~~~~~~~~~~~~~ 193 (406)
.|++.+.||+|+||.||+|.+..+++.||+|.+.... .......+.+|+.+++.++ |||++++++++.. ....+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~--~~~~~ 78 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK--GPRLW 78 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC-CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee--CCEEE
Confidence 4888999999999999999998999999999987543 2334556778999999986 9999999998876 45689
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
++|||+.++.+..+... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.........
T Consensus 79 lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06917 79 IIMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSK 157 (277)
T ss_pred EEEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccc
Confidence 99999988655444433 37899999999999999999999999999999999999999999999999999877544322
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
.....|+..|+|||.+.+...++.++|+|||||++|+|++|..||.+.+.......+... .++ .++
T Consensus 158 -~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~--~~~-------~~~---- 223 (277)
T cd06917 158 -RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS--KPP-------RLE---- 223 (277)
T ss_pred -cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC--CCC-------CCC----
Confidence 334578999999998876555789999999999999999999999876544332221110 000 000
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
...+++++.++|..||+.||.+|||+.+++.|+||++
T Consensus 224 --------------~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~ 260 (277)
T cd06917 224 --------------DNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKA 260 (277)
T ss_pred --------------cccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhc
Confidence 0126778999999999999999999999999999975
No 235
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.4e-42 Score=337.63 Aligned_cols=252 Identities=23% Similarity=0.332 Sum_probs=197.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccC-----CcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCC
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLT-----GKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMS 189 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~ 189 (406)
++|++.+.||+|+||.||+|++... +..||+|.+.... .......+.+|+.+++.+ +|+|||++++++...
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~-- 114 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA-HTDEREALMSELKILSHLGQHKNIVNLLGACTHG-- 114 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC-CHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC--
Confidence 6899999999999999999985443 3579999987543 234456788899999999 899999999998874
Q ss_pred ceEEEEEecccccHH-HHhcC-----------------------------------------------------------
Q 015455 190 CSLYLVFHYMEHDLA-GLAAS----------------------------------------------------------- 209 (406)
Q Consensus 190 ~~~~lv~e~~~~~l~-~~~~~----------------------------------------------------------- 209 (406)
..++++|||+.++.+ +.+..
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 458999999987543 33211
Q ss_pred ----------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC-CcCc
Q 015455 210 ----------PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP-MTSR 278 (406)
Q Consensus 210 ----------~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~-~~~~ 278 (406)
....+++..++.++.||+.||.|||++||+||||||+|||+++++.+||+|||+++......... ....
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~ 274 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNA 274 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCC
Confidence 11357889999999999999999999999999999999999999999999999998664332211 1122
Q ss_pred cccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCC
Q 015455 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPR 357 (406)
Q Consensus 279 ~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (406)
.++..|+|||++.+.. ++.++|||||||++|+|++ |+.||...........+......+.
T Consensus 275 ~~~~~y~aPE~~~~~~-~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~------------------ 335 (374)
T cd05106 275 RLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMS------------------ 335 (374)
T ss_pred CCccceeCHHHhcCCC-CCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCcc------------------
Confidence 3467899999987654 8999999999999999997 9999987655444433332110000
Q ss_pred CchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 358 EPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
....+++++.++|..||+.||.+|||+.++++
T Consensus 336 ---------~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 336 ---------RPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred ---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 01235788999999999999999999999976
No 236
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5e-42 Score=321.97 Aligned_cols=262 Identities=26% Similarity=0.359 Sum_probs=206.5
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|+..+.||.|++|.||+|.+..+++.||+|.+..... ......+.+|+++++.++||||+++++++.......+|++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN-PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc-hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 368999999999999999999988999999999875433 2445678889999999999999999999877666679999
Q ss_pred EecccccHH-HHh---cCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC
Q 015455 196 FHYMEHDLA-GLA---ASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 196 ~e~~~~~l~-~~~---~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~ 271 (406)
|||++++.+ +.+ ......+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 159 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL 159 (287)
T ss_pred EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccccc
Confidence 999987543 322 2345578999999999999999999999999999999999999999999999999987654222
Q ss_pred CCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHHhCCCCHHHhhhc
Q 015455 272 KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTE-----VEQLHKIYKLCGSPSEEYWKKS 346 (406)
Q Consensus 272 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~ 346 (406)
.....++..|+|||.+.+.. ++.++|||||||++|+|++|..||..... .+....+.. .... .
T Consensus 160 ---~~~~~~~~~y~~pE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~-~---- 227 (287)
T cd06621 160 ---AGTFTGTSFYMAPERIQGKP-YSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN---MPNP-E---- 227 (287)
T ss_pred ---cccccCCccccCHHHhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc---CCch-h----
Confidence 12345788999999887644 89999999999999999999999986522 122111111 0000 0
Q ss_pred CCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 347 KLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.+.. .......++.+.+||.+||..||.+|||+.|++.||||+.
T Consensus 228 -~~~~-------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~ 271 (287)
T cd06621 228 -LKDE-------------PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKA 271 (287)
T ss_pred -hccC-------------CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccc
Confidence 0000 0000123567899999999999999999999999999975
No 237
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.2e-42 Score=318.43 Aligned_cols=254 Identities=26% Similarity=0.481 Sum_probs=208.1
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~ 196 (406)
+|++.+.||+|+||.||+|.+..+|..||+|.+..........+.+.+|+.+++.++|+||+++++.+.. ....++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~--~~~~~lv~ 78 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQE--NGRLFIVM 78 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheecc--CCeEEEEE
Confidence 4889999999999999999999999999999997765444455677889999999999999999998876 45699999
Q ss_pred eccccc-HHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCc-EEEeeeccccccCCCCCC
Q 015455 197 HYMEHD-LAGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGV-LKIADFGLASFFDPNHKH 273 (406)
Q Consensus 197 e~~~~~-l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~-~kl~DFgla~~~~~~~~~ 273 (406)
||+.++ +...+.. ....+++..+..++.|++.||.|||+.+++|+||||+||++++++. ++|+|||.+........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~- 157 (257)
T cd08225 79 EYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME- 157 (257)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcc-
Confidence 999874 4444433 3335899999999999999999999999999999999999998864 69999999987653322
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
......|++.|+|||++.+.. ++.++|+||||+++|+|++|..||...+..+....+....
T Consensus 158 ~~~~~~~~~~~~ape~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------------------ 218 (257)
T cd08225 158 LAYTCVGTPYYLSPEICQNRP-YNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGY------------------ 218 (257)
T ss_pred cccccCCCccccCHHHHcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccc------------------
Confidence 223356899999999887654 8899999999999999999999998776555444332210
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
.....+.++.++.++|.+||..+|++|||+.+++.||||
T Consensus 219 ----------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 219 ----------FAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred ----------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 001113567789999999999999999999999999997
No 238
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.9e-42 Score=319.31 Aligned_cols=250 Identities=21% Similarity=0.368 Sum_probs=203.5
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
.+|++.+.||+|+||.||+|.+..+++.||+|.+..+. .....+.+|+++++.++|+||+++++++... ..++++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv 80 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--PPFYII 80 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc---hHHHHHHHHHHHHHhCCCCChhheEEEEcCC--CCcEEE
Confidence 56899999999999999999998899999999986443 2345678899999999999999999988764 458999
Q ss_pred Eeccccc-HHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 196 FHYMEHD-LAGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 196 ~e~~~~~-l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
|||++++ +.+.+.. ....+++..++.++.|++.||+|||+.|++||||||+|||+++++.+||+|||++.........
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~ 160 (263)
T cd05052 81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 160 (263)
T ss_pred EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceee
Confidence 9999865 4444433 3346899999999999999999999999999999999999999999999999999876543322
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
......++..|+|||.+.+.. ++.++|||||||++|||++ |..||.+.+..+....+......
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~--------------- 224 (263)
T cd05052 161 AHAGAKFPIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRM--------------- 224 (263)
T ss_pred ccCCCCCccccCCHHHhccCC-CCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCC---------------
Confidence 222233467899999887654 8899999999999999998 99999987766655554321100
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
.....+++.+.++|.+||+.||++|||+.++++.
T Consensus 225 -------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~ 258 (263)
T cd05052 225 -------------ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQA 258 (263)
T ss_pred -------------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 1113578889999999999999999999999764
No 239
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3.9e-42 Score=317.03 Aligned_cols=248 Identities=21% Similarity=0.346 Sum_probs=201.3
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.+.||+|+||.||+++. .++..+|+|.+...... ...+.+|+++++.++||||+++++++... ...+++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~-~~~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~iv 77 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKW-RAQIKVAIKAINEGAMS---EEDFIEEAKVMMKLSHPKLVQLYGVCTQQ--KPLYIV 77 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEe-ccCceEEEEecccCCcc---HHHHHHHHHHHHHCCCCCceeEEEEEccC--CCEEEE
Confidence 5799999999999999999986 45668999987654332 34577899999999999999999998774 458999
Q ss_pred Eeccccc-HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 196 FHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 196 ~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
|||++++ +.+.+......+++..++.++.|++.||.|||+.|++||||||+||+++.++.+||+|||++..........
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~ 157 (256)
T cd05114 78 TEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTS 157 (256)
T ss_pred EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceec
Confidence 9999865 555554444578999999999999999999999999999999999999999999999999998654332222
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
.....++..|+|||++.+. .++.++|+||||+++|+|++ |+.||...+..+.+..+.+.....
T Consensus 158 ~~~~~~~~~y~aPE~~~~~-~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~--------------- 221 (256)
T cd05114 158 SSGAKFPVKWSPPEVFNFS-KYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLY--------------- 221 (256)
T ss_pred cCCCCCchhhCChhhcccC-ccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCC---------------
Confidence 2233456789999998764 48899999999999999999 999999888777766664421100
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.....+..+.++|.+||+.||.+|||+.++++
T Consensus 222 -------------~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 222 -------------RPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred -------------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 00134567899999999999999999999986
No 240
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=339.41 Aligned_cols=253 Identities=21% Similarity=0.347 Sum_probs=206.6
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
+.+.+...||+|.||+||+|++ .| .||||++......++..+.|.+|+.++++-+|.||+-+.|+|..+. +.||
T Consensus 392 ~ev~l~~rIGsGsFGtV~Rg~w--hG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~---~AIi 465 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFGTVYRGRW--HG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP---LAII 465 (678)
T ss_pred HHhhccceeccccccceeeccc--cc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc---eeee
Confidence 6788899999999999999975 44 4999999988888889999999999999999999999999998753 4999
Q ss_pred EecccccHHH-HhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCC-CCCC
Q 015455 196 FHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDP-NHKH 273 (406)
Q Consensus 196 ~e~~~~~l~~-~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~-~~~~ 273 (406)
+-+|+|+.+. .+...+.+|.....+.|++||+.||.|||.++|||||||..|||+.++++|||+||||+..-.- ....
T Consensus 466 TqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~ 545 (678)
T KOG0193|consen 466 TQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQ 545 (678)
T ss_pred ehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeecccc
Confidence 9999996554 5555667899999999999999999999999999999999999999999999999999965321 1222
Q ss_pred CCcCccccCcccccccccC--CccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCc
Q 015455 274 PMTSRVVTLWYRPPELLLG--ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~--~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 351 (406)
......|...|||||++.. ..+|++.+|||||||++|||+||..||...+..+.+-.+-+....+.
T Consensus 546 q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd------------ 613 (678)
T KOG0193|consen 546 QLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPD------------ 613 (678)
T ss_pred ccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCcc------------
Confidence 2344567889999999853 34599999999999999999999999995444333332222211111
Q ss_pred ccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 352 TLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
........+.++++|+..|+..++++||+..++|.
T Consensus 614 ------------~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 614 ------------LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred ------------chhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 11122367789999999999999999999999886
No 241
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=4.3e-42 Score=320.65 Aligned_cols=255 Identities=27% Similarity=0.448 Sum_probs=209.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
..|+.++.||.|+||.||+|.+..++..||+|.+..... ......+.+|+.+++.++||||+++++++.+ ....|+|
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 80 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLK--GTKLWII 80 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE--CCEEEEE
Confidence 458889999999999999999888999999999875533 3445678889999999999999999999887 4569999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
|||++++.+..+... ..+++..+..++.|++.||+|||+.+++|+||+|+||+++.++.++|+|||++....... ...
T Consensus 81 ~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-~~~ 158 (277)
T cd06640 81 MEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IKR 158 (277)
T ss_pred EecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc-ccc
Confidence 999988655444333 468999999999999999999999999999999999999999999999999997764332 223
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCC
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFK 355 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 355 (406)
....++..|+|||++.+.. ++.++|+|||||++|+|++|..||...+.......+.... +
T Consensus 159 ~~~~~~~~y~apE~~~~~~-~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~--~----------------- 218 (277)
T cd06640 159 NTFVGTPFWMAPEVIQQSA-YDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN--P----------------- 218 (277)
T ss_pred ccccCcccccCHhHhccCC-CccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCC--C-----------------
Confidence 3456788999999987654 8899999999999999999999998776554433321100 0
Q ss_pred CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 356 PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
......++..+.++|.+||+.||.+|||+.++++|+||..
T Consensus 219 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 258 (277)
T cd06640 219 ---------PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVK 258 (277)
T ss_pred ---------CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhh
Confidence 0111245677899999999999999999999999999975
No 242
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.8e-42 Score=322.93 Aligned_cols=255 Identities=36% Similarity=0.515 Sum_probs=211.1
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCC-CCCeeeEeeeeeecCCceEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLD-HPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~l~~~~~~~~~~~~~ 193 (406)
++|.+.+.||+|+||.||+|.+..+|+.||+|++..... .......+.+|++++.+++ ||||+++++++.. ....+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~--~~~~~ 78 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQD--EENLY 78 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcC--CceEE
Confidence 369999999999999999999988999999999876433 3344566788999999998 9999999998876 34699
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC-
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK- 272 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~- 272 (406)
++||++.++.+.........+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++........
T Consensus 79 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 79 FVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 9999996654443444445799999999999999999999999999999999999999999999999999987654332
Q ss_pred ------------------CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 015455 273 ------------------HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334 (406)
Q Consensus 273 ------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~ 334 (406)
.......++..|+|||++.+.. ++.++|+||||++++++++|+.||...+....+..+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 237 (280)
T cd05581 159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKP-AGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKL 237 (280)
T ss_pred ccCCCCCccccccccccccccccccCCccccCHHHhCCCC-CChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc
Confidence 1122345789999999887644 888999999999999999999999988766666555432
Q ss_pred hCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCH----HHHhcCccc
Q 015455 335 CGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTA----TVALNSEVS 402 (406)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta----~elL~h~~f 402 (406)
.... ...+++.+.+||..||+.||.+|||+ .++|+||||
T Consensus 238 ~~~~-----------------------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 238 EYSF-----------------------------PPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred CCCC-----------------------------CCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 1111 12567889999999999999999999 999999998
No 243
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.2e-41 Score=323.58 Aligned_cols=255 Identities=29% Similarity=0.448 Sum_probs=212.0
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
+.|...+.||+|+||.||+|++..+|+.||+|.+..... .......+.+|+++++.++|||++++++++.+. ...|+
T Consensus 21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~l 98 (313)
T cd06633 21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKE--HTAWL 98 (313)
T ss_pred HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC--CEEEE
Confidence 457778899999999999999989999999999875533 334445678899999999999999999998874 56899
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
+|||+.+++...+......+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 99 v~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~----- 173 (313)
T cd06633 99 VMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP----- 173 (313)
T ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC-----
Confidence 999999988887776667899999999999999999999999999999999999999999999999999864322
Q ss_pred CcCccccCcccccccccC--CccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 275 MTSRVVTLWYRPPELLLG--ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~--~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
.....++..|+|||++.+ ...++.++|||||||++|+|++|.+||...+.......+.... .+.
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~-~~~------------- 239 (313)
T cd06633 174 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND-SPT------------- 239 (313)
T ss_pred CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC-CCC-------------
Confidence 234568899999998742 2347889999999999999999999998877666555443211 000
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.....++..+.+||.+||++||.+|||+.++|.||||..
T Consensus 240 -------------~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~ 278 (313)
T cd06633 240 -------------LQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRR 278 (313)
T ss_pred -------------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence 001245667999999999999999999999999999974
No 244
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.9e-42 Score=326.51 Aligned_cols=256 Identities=25% Similarity=0.442 Sum_probs=209.2
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
..|+....||+|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.++..++|||++++++++.. ....|++
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~--~~~~~iv 96 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHQNVVEMYKSYLV--GEELWVL 96 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc--chHHHHHHHHHHHHhCCCCchhhhhhheee--CCeEEEE
Confidence 446667789999999999999988999999999875432 234567789999999999999999998877 4568999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
+||++++.+..+... ..+++..++.++.|++.||+|||+.|++||||||+||+++.++.++|+|||++........ ..
T Consensus 97 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~-~~ 174 (297)
T cd06659 97 MEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP-KR 174 (297)
T ss_pred EecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc-cc
Confidence 999998665544433 4689999999999999999999999999999999999999999999999999976543322 22
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCC
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFK 355 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 355 (406)
....++..|+|||++.+.. ++.++|||||||++|+|++|+.||...+..+.+..+... +..
T Consensus 175 ~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~~--------------- 235 (297)
T cd06659 175 KSLVGTPYWMAPEVISRTP-YGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS---PPP--------------- 235 (297)
T ss_pred cceecCccccCHHHHccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcc---CCC---------------
Confidence 3457899999999987654 889999999999999999999999877766655444221 000
Q ss_pred CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 356 PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.......+++.+.++|..||+.||.+|||+.++++||||.+
T Consensus 236 --------~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~ 276 (297)
T cd06659 236 --------KLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQ 276 (297)
T ss_pred --------CccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhcc
Confidence 00111256778999999999999999999999999999975
No 245
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.4e-43 Score=359.70 Aligned_cols=262 Identities=31% Similarity=0.485 Sum_probs=206.1
Q ss_pred cccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecC----
Q 015455 113 RRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRM---- 188 (406)
Q Consensus 113 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~---- 188 (406)
+...+|+.+..||+||||.||+++++-+|+.||||+|.... .......+.+|+..|.+|+|||||+++..+.+..
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 35678999999999999999999999999999999998776 5666778889999999999999999864221100
Q ss_pred --------------------------------------------------------------------------------
Q 015455 189 -------------------------------------------------------------------------------- 188 (406)
Q Consensus 189 -------------------------------------------------------------------------------- 188 (406)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred ---------------------------------CceEEEEEecccccHHHHhcCCCCCC-CHHHHHHHHHHHHHHHHHHH
Q 015455 189 ---------------------------------SCSLYLVFHYMEHDLAGLAASPEVKF-TEPQVKCYMHQLLSGLEHCH 234 (406)
Q Consensus 189 ---------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~-~~~~~~~~~~qi~~aL~~LH 234 (406)
...+||-||||+..++..+...+... ....++++++||++||.|+|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence 01279999999999999887776544 57889999999999999999
Q ss_pred HCCCeeccCCCCCeEEcCCCcEEEeeeccccccC-----------------CCCCCCCcCccccCcccccccccCCc--c
Q 015455 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-----------------PNHKHPMTSRVVTLWYRPPELLLGAT--D 295 (406)
Q Consensus 235 ~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~-----------------~~~~~~~~~~~gt~~y~aPE~~~~~~--~ 295 (406)
++|||||||||.|||+++++.|||+|||+|+... .......++.+||.-|+|||++.+.. .
T Consensus 715 ~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~ 794 (1351)
T KOG1035|consen 715 DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNK 794 (1351)
T ss_pred hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccc
Confidence 9999999999999999999999999999998721 11122356789999999999987665 6
Q ss_pred CCCccchHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCC
Q 015455 296 YGVGVDLWSAGCILAELLAGKPIMPGR-TEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPS 374 (406)
Q Consensus 296 ~~~~~DvwslGv~l~ell~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (406)
|+.|+|+|||||+++||+. ||... .-...+.++.+ ..+|....+ +..--+.
T Consensus 795 Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~------------g~iP~~~~f-------------~~~~~~~ 846 (1351)
T KOG1035|consen 795 YNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRK------------GSIPEPADF-------------FDPEHPE 846 (1351)
T ss_pred ccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhccc------------CCCCCCccc-------------ccccchH
Confidence 9999999999999999995 46432 22222333321 111111000 0112234
Q ss_pred hHHHHHHcccCCCCCCcCHHHHhcCcccc
Q 015455 375 SLPLIETLLAIDPAERLTATVALNSEVSY 403 (406)
Q Consensus 375 ~~~li~~~L~~dP~~Rpta~elL~h~~f~ 403 (406)
-..+|+.||+.||.+||||.|+|++.||-
T Consensus 847 e~slI~~Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 847 EASLIRWLLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred HHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence 57799999999999999999999999985
No 246
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.2e-41 Score=312.72 Aligned_cols=254 Identities=32% Similarity=0.509 Sum_probs=213.0
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~ 196 (406)
+|++.+.||+|++|.||++++..+++.||+|.+............+.+|++++++++|+|++++++++.. ....+++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIET--SDSLYIIL 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEe--CCEEEEEE
Confidence 4888999999999999999988899999999998776555667788999999999999999999998876 35699999
Q ss_pred ecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCc
Q 015455 197 HYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMT 276 (406)
Q Consensus 197 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~ 276 (406)
||++++.+..+......+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++......... ..
T Consensus 79 e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-~~ 157 (254)
T cd06627 79 EYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD-DA 157 (254)
T ss_pred ecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc-cc
Confidence 99998655555444468999999999999999999999999999999999999999999999999999877544332 23
Q ss_pred CccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCC
Q 015455 277 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKP 356 (406)
Q Consensus 277 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (406)
...++..|+|||.+.+.. ++.++||||+|+++|+|++|..||...+.......+.... .
T Consensus 158 ~~~~~~~y~~pe~~~~~~-~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--~------------------ 216 (254)
T cd06627 158 SVVGTPYWMAPEVIEMSG-ASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDD--H------------------ 216 (254)
T ss_pred ccccchhhcCHhhhcCCC-CCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccC--C------------------
Confidence 456789999999887654 8899999999999999999999998766544433332100 0
Q ss_pred CCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 357 REPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
......+++.+.++|.+||..+|++|||+.+++.||||
T Consensus 217 --------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 217 --------PPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred --------CCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 00112567889999999999999999999999999997
No 247
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.3e-41 Score=323.78 Aligned_cols=255 Identities=28% Similarity=0.453 Sum_probs=212.6
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
..|+..+.||+|+||.||+|++..++..||+|.+..... ..+....+.+|+.+++.++|||++++++++... ...++
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~l 102 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLRE--HTAWL 102 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC--CeEEE
Confidence 458999999999999999999988999999999875533 334456788899999999999999999998874 45899
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
+|||+.+++.+.+......+++..+..++.|++.||.|||+.|++||||+|+||+++.++.++|+|||++......
T Consensus 103 v~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~---- 178 (317)
T cd06635 103 VMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA---- 178 (317)
T ss_pred EEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCc----
Confidence 9999999888877666667999999999999999999999999999999999999999999999999998754322
Q ss_pred CcCccccCcccccccccC--CccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 275 MTSRVVTLWYRPPELLLG--ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~--~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
....+++.|+|||++.+ ...++.++|||||||++|+|++|.+||...+.......+......+.
T Consensus 179 -~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~------------- 244 (317)
T cd06635 179 -NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTL------------- 244 (317)
T ss_pred -ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCC-------------
Confidence 34567889999998742 23478899999999999999999999988766665555543211110
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.....++.+.+||.+||+.||.+|||+.++++|+|+..
T Consensus 245 --------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 245 --------------QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred --------------CCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 01245667899999999999999999999999999853
No 248
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=2.3e-42 Score=336.36 Aligned_cols=253 Identities=20% Similarity=0.306 Sum_probs=197.4
Q ss_pred CCcceeeeeccCCceEEEEEEE-----ccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCC
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKD-----MLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMS 189 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~ 189 (406)
++|++.+.||+|+||+||+|++ ..++..||+|+++.... ....+.+.+|+.++..+ +||||+++++++...
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~-- 111 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHINIVNLLGACTVG-- 111 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC-cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC--
Confidence 5799999999999999999964 34567899999865432 23456678899999999 899999999998774
Q ss_pred ceEEEEEeccccc-HHHHhcCC----------------------------------------------------------
Q 015455 190 CSLYLVFHYMEHD-LAGLAASP---------------------------------------------------------- 210 (406)
Q Consensus 190 ~~~~lv~e~~~~~-l~~~~~~~---------------------------------------------------------- 210 (406)
...++||||++++ +...+...
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 4589999999875 43333211
Q ss_pred ----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 211 ----------------EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 211 ----------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++..........
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 271 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYV 271 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCccccc
Confidence 1257889999999999999999999999999999999999999999999999998764332211
Q ss_pred -CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 275 -MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 275 -~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
.....++..|+|||++.+.. ++.++|||||||++|||++ |..||.+......+.+.......+
T Consensus 272 ~~~~~~~~~~y~aPE~~~~~~-~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~-------------- 336 (375)
T cd05104 272 VKGNARLPVKWMAPESIFNCV-YTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRM-------------- 336 (375)
T ss_pred ccCCCCCCcceeChhHhcCCC-CCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccC--------------
Confidence 12233467899999987654 8999999999999999998 899998766544433332210000
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
......++++.+||..||+.||++|||+.++++.
T Consensus 337 -------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 337 -------------LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred -------------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 0012356789999999999999999999999864
No 249
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=4.9e-42 Score=317.00 Aligned_cols=250 Identities=31% Similarity=0.394 Sum_probs=201.0
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCC-hHHHHHHHHHHHHH-hhCCCCCeeeEeeeeeecCCceEEEEEecc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-PESVKFMAREILIL-RRLDHPNVIKLEGLVTSRMSCSLYLVFHYM 199 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l-~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~ 199 (406)
+.||.|+||.||+|.+..+|+.||+|.+...... ......+..|..++ ...+|+|++++++++.. ....|+++||+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~~~~lv~e~~ 79 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS--KDYLYLVMEYL 79 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc--CCeEEEEEecc
Confidence 5689999999999999889999999998754332 22223344455544 45589999999999876 45699999999
Q ss_pred cccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCcc
Q 015455 200 EHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRV 279 (406)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~ 279 (406)
+++.+..+......+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++..... .....
T Consensus 80 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----~~~~~ 154 (260)
T cd05611 80 NGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----NKKFV 154 (260)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc-----cccCC
Confidence 9866665555556799999999999999999999999999999999999999999999999999876432 22346
Q ss_pred ccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCc
Q 015455 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREP 359 (406)
Q Consensus 280 gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (406)
+++.|+|||.+.+.. ++.++||||||+++|+|++|..||...+.......+.......+.
T Consensus 155 ~~~~y~~pe~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------------- 214 (260)
T cd05611 155 GTPDYLAPETILGVG-DDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPE------------------- 214 (260)
T ss_pred CCcCccChhhhcCCC-CcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCC-------------------
Confidence 788999999987755 889999999999999999999999888776655554332110000
Q ss_pred hhhhhhhhcCCCCCChHHHHHHcccCCCCCCcC---HHHHhcCccccc
Q 015455 360 YKRCIQETFKDFPPSSLPLIETLLAIDPAERLT---ATVALNSEVSYQ 404 (406)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---a~elL~h~~f~~ 404 (406)
.....+++.+.++|.+||+.||.+||| ++|+|.||||..
T Consensus 215 ------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~ 256 (260)
T cd05611 215 ------EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKS 256 (260)
T ss_pred ------cccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhc
Confidence 011257889999999999999999995 579999999986
No 250
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.1e-41 Score=315.71 Aligned_cols=258 Identities=26% Similarity=0.415 Sum_probs=209.0
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCC---CChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDN---LEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~ 192 (406)
.+|++.+.||+|+||.||+|++..+++.||+|.+.... ........+.+|++++++++|+||+++++++.+.....+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 47999999999999999999999999999999886432 123445678889999999999999999999877656678
Q ss_pred EEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC
Q 015455 193 YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK 272 (406)
Q Consensus 193 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~ 272 (406)
++++||+.++.+.........+++..++.++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++........
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 161 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM 161 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccc
Confidence 99999998765544444445689999999999999999999999999999999999999999999999999986542211
Q ss_pred --CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 273 --HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 273 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
.......++..|+|||++.+.. ++.++|+|||||++|+|++|+.||...........+.. .+..
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~---------- 227 (264)
T cd06653 162 SGTGIKSVTGTPYWMSPEVISGEG-YGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIAT---QPTK---------- 227 (264)
T ss_pred cCccccccCCcccccCHhhhcCCC-CCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHc---CCCC----------
Confidence 1123456899999999987754 88999999999999999999999987665544433321 1110
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
......+++.+.++|..||. +|.+|||+.++|.|||.
T Consensus 228 --------------~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 228 --------------PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred --------------CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 01123577889999999999 57999999999999984
No 251
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.8e-43 Score=340.38 Aligned_cols=253 Identities=24% Similarity=0.353 Sum_probs=214.3
Q ss_pred ceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC--ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEE
Q 015455 119 EKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL--EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 119 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~ 196 (406)
+.-.+||+|+|-+||+|.|..+|..||--.++.... .+...+++..|+.+|+.|+|||||++++++.+.....+.+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 445789999999999999999999998766555443 455568899999999999999999999999987777899999
Q ss_pred ecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC--CCeeccCCCCCeEEcC-CCcEEEeeeccccccCCCCCC
Q 015455 197 HYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN--GVLHRDIKGSNLLIDD-DGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 197 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~--~ivHrDlkp~NIll~~-~~~~kl~DFgla~~~~~~~~~ 273 (406)
|.+..|.+..+..+.+.++...++.|++||++||.|||++ .|||||||.+||||+. .|.|||+|+|||.......
T Consensus 123 EL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~-- 200 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH-- 200 (632)
T ss_pred ecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccc--
Confidence 9999888887777777899999999999999999999999 5999999999999984 5899999999999886443
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVE-QLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
..+.+|||.|||||++.. .|+..+||||||++++||+|+..||....+.. .++++.... .|..
T Consensus 201 -aksvIGTPEFMAPEmYEE--~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGi--KP~s----------- 264 (632)
T KOG0584|consen 201 -AKSVIGTPEFMAPEMYEE--NYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGI--KPAA----------- 264 (632)
T ss_pred -cceeccCccccChHHHhh--hcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCC--CHHH-----------
Confidence 355899999999999873 49999999999999999999999998766554 445554321 1111
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
..+--.+++++||.+||.. .+.|+|+.|||.||||..
T Consensus 265 --------------l~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~ 301 (632)
T KOG0584|consen 265 --------------LSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDE 301 (632)
T ss_pred --------------hhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhcc
Confidence 1122367899999999999 999999999999999974
No 252
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=7.7e-42 Score=314.79 Aligned_cols=251 Identities=25% Similarity=0.439 Sum_probs=206.5
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~ 196 (406)
+|++.+.||.|+||.||++++..+++.||+|.++.... ....+.+.+|+.+++.++|+||+++++.+.. ...+|++|
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 77 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS-SSAVEDSRKEAVLLAKMKHPNIVAFKESFEA--DGHLYIVM 77 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc-hHHHHHHHHHHHHHHhCCCCCcceEEEEEEE--CCEEEEEE
Confidence 48899999999999999999999999999999875432 3345677889999999999999999999877 45699999
Q ss_pred eccccc-HHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 197 HYMEHD-LAGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 197 e~~~~~-l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
||++++ +...+.. ....+++..++.++.||+.||.|||+.|++|+||||+||+++.++.++|+|||++........ .
T Consensus 78 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-~ 156 (255)
T cd08219 78 EYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA-Y 156 (255)
T ss_pred eeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccccc-c
Confidence 999874 5554433 345689999999999999999999999999999999999999999999999999976643221 2
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
.....+++.|+|||++.+.. ++.++|+||||+++|+|++|..||...+.......+......+
T Consensus 157 ~~~~~~~~~~~aPE~~~~~~-~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------------- 219 (255)
T cd08219 157 ACTYVGTPYYVPPEIWENMP-YNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKP---------------- 219 (255)
T ss_pred cccccCCccccCHHHHccCC-cCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCC----------------
Confidence 23456899999999887654 8899999999999999999999998877665555443311110
Q ss_pred CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCc
Q 015455 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSE 400 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~ 400 (406)
....++..+.+||.+||+.||.+|||+.++|+--
T Consensus 220 ------------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~ 253 (255)
T cd08219 220 ------------LPSHYSYELRSLIKQMFKRNPRSRPSATTILSRG 253 (255)
T ss_pred ------------CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhcc
Confidence 0124567789999999999999999999998753
No 253
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=9.3e-42 Score=319.88 Aligned_cols=255 Identities=27% Similarity=0.473 Sum_probs=207.9
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~ 196 (406)
.|...+.||+|++|.||++.+..+++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.. ....++++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~--~~~~~~v~ 95 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK--QQRRELLFNEVVIMRDYQHPNIVEMYSSYLV--GDELWVVM 95 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHHcCCCChheEEEEEEc--CCeEEEEE
Confidence 5666789999999999999988899999999986543 2334567789999999999999999998876 45689999
Q ss_pred ecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCc
Q 015455 197 HYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMT 276 (406)
Q Consensus 197 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~ 276 (406)
||+.++.+...... ..+++..++.++.|++.||+|||++|++||||+|+||+++.++.++|+|||++........ ...
T Consensus 96 e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~-~~~ 173 (285)
T cd06648 96 EFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP-RRK 173 (285)
T ss_pred eccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc-ccc
Confidence 99987555444333 4789999999999999999999999999999999999999999999999998876543221 123
Q ss_pred CccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCC
Q 015455 277 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKP 356 (406)
Q Consensus 277 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (406)
...|++.|+|||.+.+.. ++.++|||||||++|+|++|..||...+.......+.... .+..
T Consensus 174 ~~~~~~~y~aPE~~~~~~-~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~-~~~~---------------- 235 (285)
T cd06648 174 SLVGTPYWMAPEVISRLP-YGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNL-PPKL---------------- 235 (285)
T ss_pred cccCCccccCHHHhcCCC-CCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcC-CCCC----------------
Confidence 456899999999987654 8899999999999999999999998877665555443321 0000
Q ss_pred CCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 357 REPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.....++..+.+||.+||+.||.+|||+.++|+||||..
T Consensus 236 ---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 274 (285)
T cd06648 236 ---------KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAK 274 (285)
T ss_pred ---------cccccCCHHHHHHHHHHcccChhhCcCHHHHccCccccc
Confidence 001236778999999999999999999999999999975
No 254
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=8.4e-42 Score=313.97 Aligned_cols=254 Identities=29% Similarity=0.472 Sum_probs=213.1
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~ 196 (406)
+|++.+.||+|+||.||++.+..+++.||+|++............+.+|+++++.++|+|++++.+.+... ...++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~--~~~~lv~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK--GKLCIVM 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC--CEEEEEE
Confidence 48899999999999999999988999999999987665556677788999999999999999999988774 6799999
Q ss_pred eccccc-HHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC
Q 015455 197 HYMEHD-LAGLAASP---EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK 272 (406)
Q Consensus 197 e~~~~~-l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~ 272 (406)
||++++ +...+... ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 157 (258)
T cd08215 79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV- 157 (258)
T ss_pred EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc-
Confidence 999874 54444433 4689999999999999999999999999999999999999999999999999998765433
Q ss_pred CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 273 HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 273 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
.......+++.|+|||.+.+.. ++.++|+||+|+++|+|++|..||...+..+....+......
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------------- 221 (258)
T cd08215 158 DLAKTVVGTPYYLSPELCQNKP-YNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYP--------------- 221 (258)
T ss_pred ceecceeeeecccChhHhccCC-CCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCC---------------
Confidence 1233457889999999887654 889999999999999999999999877755554444321100
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
.....++..+.++|..||..||.+|||+.++|+||||
T Consensus 222 -------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 222 -------------PIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred -------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 0112567889999999999999999999999999997
No 255
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.4e-42 Score=330.35 Aligned_cols=279 Identities=24% Similarity=0.336 Sum_probs=203.2
Q ss_pred eeeccC--CceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEecc
Q 015455 122 DKIGQG--TYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYM 199 (406)
Q Consensus 122 ~~lg~G--~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~ 199 (406)
..||+| +||+||++++..+|+.||+|++..........+.+.+|+.+++.++||||++++++|... ...++++||+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~--~~~~~v~e~~ 81 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTG--SWLWVISPFM 81 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecC--CceEEEEecc
Confidence 456666 999999999999999999999987655556667888999999999999999999999874 4589999999
Q ss_pred cccH-HHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC---
Q 015455 200 EHDL-AGLAASP-EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--- 274 (406)
Q Consensus 200 ~~~l-~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~--- 274 (406)
.++. ...+... ...+++..++.++.||+.||+|||+.|++||||||+|||++.++.++++||+.+..........
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (328)
T cd08226 82 AYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVV 161 (328)
T ss_pred cCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccc
Confidence 9754 4433322 3458999999999999999999999999999999999999999999999998654332111100
Q ss_pred ---CcCccccCcccccccccCC-ccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 275 ---MTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 275 ---~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
.....++..|+|||++.+. ..++.++|||||||++|+|++|.+||.+.........+.......+. ....++.
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 238 (328)
T cd08226 162 YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPL---DITTFPC 238 (328)
T ss_pred ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCc---cccccch
Confidence 0112346679999998653 34789999999999999999999999887765554444332111110 0000000
Q ss_pred c--ccCCC-------------------CCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 351 A--TLFKP-------------------REPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 351 ~--~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
. ..... .......-......+++.+.+||++||+.||.+|||+.++|+||||+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~ 314 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV 314 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence 0 00000 0000000011122456779999999999999999999999999999853
No 256
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.3e-41 Score=315.67 Aligned_cols=256 Identities=27% Similarity=0.385 Sum_probs=200.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
+.+.....||+|+||.||+|++..++..||+|.+.... ......+.+|+.+++.++|+||+++++++.. ....+++
T Consensus 8 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 83 (268)
T cd06624 8 DENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD--SRYVQPLHEEIALHSYLKHRNIVQYLGSDSE--NGFFKIF 83 (268)
T ss_pred ccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCCeeeeeeeecc--CCEEEEE
Confidence 45555678999999999999988899999999886543 3345678889999999999999999999877 4569999
Q ss_pred EecccccHH-HHhcCCCCCC--CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcC-CCcEEEeeeccccccCCCC
Q 015455 196 FHYMEHDLA-GLAASPEVKF--TEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD-DGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 196 ~e~~~~~l~-~~~~~~~~~~--~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~-~~~~kl~DFgla~~~~~~~ 271 (406)
+||+.++.+ ..+......+ ++..+..++.||+.||+|||+.||+||||||+||+++. ++.++|+|||++.......
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~ 163 (268)
T cd06624 84 MEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN 163 (268)
T ss_pred EecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCC
Confidence 999987544 4444433445 88999999999999999999999999999999999976 6799999999997664322
Q ss_pred CCCCcCccccCcccccccccCC-ccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 272 KHPMTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 272 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
. ......+++.|+|||++.+. ..++.++|+||||+++|+|++|+.||..................
T Consensus 164 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~------------- 229 (268)
T cd06624 164 P-CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKI------------- 229 (268)
T ss_pred C-ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhcc-------------
Confidence 2 12334678999999988543 23788999999999999999999999764432211110000000
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
.......+++++.+||.+||+.+|.+|||+.+++.||||
T Consensus 230 -------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 230 -------------HPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred -------------CCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 001113567789999999999999999999999999997
No 257
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=9.5e-42 Score=318.35 Aligned_cols=256 Identities=28% Similarity=0.458 Sum_probs=209.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
+-|++.+.||+|+||.||+|.+..++..||+|.+..... ......+.+|+.++.+++||||+++++++.. ....|+|
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 80 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLK--DTKLWII 80 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEe--CCeEEEE
Confidence 458889999999999999999888999999998865433 2345678889999999999999999999887 4569999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
|||++++.+...... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++........ ..
T Consensus 81 ~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~-~~ 158 (277)
T cd06641 81 MEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-KR 158 (277)
T ss_pred EEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchh-hh
Confidence 999998655544433 3689999999999999999999999999999999999999999999999999876643221 22
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCC
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFK 355 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 355 (406)
....++..|+|||.+.+. .++.++|+|||||++|+|++|..||...........+.... +
T Consensus 159 ~~~~~~~~y~~PE~~~~~-~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--~----------------- 218 (277)
T cd06641 159 NTFVGTPFWMAPEVIKQS-AYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNN--P----------------- 218 (277)
T ss_pred ccccCCccccChhhhccC-CCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCC--C-----------------
Confidence 345678899999988764 37889999999999999999999998766554444332110 0
Q ss_pred CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 356 PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
......++.++.++|..||..||.+||++.++++||||.+.
T Consensus 219 ---------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 219 ---------PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred ---------CCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 00112467789999999999999999999999999999753
No 258
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.1e-41 Score=316.44 Aligned_cols=253 Identities=21% Similarity=0.267 Sum_probs=201.4
Q ss_pred cceeeeeccCCceEEEEEEEccC---CcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCC----c
Q 015455 118 FEKIDKIGQGTYSNVYKAKDMLT---GKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMS----C 190 (406)
Q Consensus 118 y~~~~~lg~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~----~ 190 (406)
|++.+.||+|+||.||+|....+ +..||+|.+............+.+|+.+++.++||||+++++++..... .
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 56788999999999999987554 3789999998765555566778899999999999999999998765322 3
Q ss_pred eEEEEEecccccHHH-Hhc-----CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccc
Q 015455 191 SLYLVFHYMEHDLAG-LAA-----SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA 264 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~-~~~-----~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla 264 (406)
..+++|||+.++.+. .+. .....+++..++.++.|++.||.|||+.+++||||||+||++++++.+||+|||++
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence 479999999875443 331 12347899999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCC-CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 015455 265 SFFDPNHKHP-MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEY 342 (406)
Q Consensus 265 ~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 342 (406)
+......... .....++..|+|||.+.+. .++.++|||||||++|||++ |.+||.+.+..+.+..+......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~----- 234 (273)
T cd05035 161 KKIYSGDYYRQGRIAKMPVKWIAIESLADR-VYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRL----- 234 (273)
T ss_pred eeccccccccccccccCCccccCHhhcccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-----
Confidence 8764332221 1223346789999988654 48999999999999999999 89999887776665554331100
Q ss_pred hhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 343 WKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
.....+++.+.++|.+||+.||.+|||+.+++.+
T Consensus 235 -----------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 235 -----------------------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred -----------------------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0113567889999999999999999999999864
No 259
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=6.2e-42 Score=316.53 Aligned_cols=248 Identities=23% Similarity=0.403 Sum_probs=202.0
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.++||+|+||.||+|.. .++..||+|.+.... ...+.+.+|+.+++.++|+||+++++.+.. ....+++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 79 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYY-NNSTKVAVKTLKPGT---MSVQAFLEEANLMKTLQHDKLVRLYAVVTK--EEPIYII 79 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEe-cCCceEEEEEccCCc---hhHHHHHHHHHHHHhCCCCCeeeEEEEEcC--CCCcEEE
Confidence 7899999999999999999985 566789999876533 234567889999999999999999988876 3458999
Q ss_pred Eecccc-cHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 196 FHYMEH-DLAGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 196 ~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
|||+.+ ++...+.. ....+++..++.++.|++.||+|||+.+++||||||+||+++.++.++|+|||++.........
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05072 80 TEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT 159 (261)
T ss_pred EecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCcee
Confidence 999976 55554432 3457899999999999999999999999999999999999999999999999999876543322
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
......++..|+|||++.+.. ++.++|||||||++|+|++ |..||.+.+..+....+......+
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~-------------- 224 (261)
T cd05072 160 AREGAKFPIKWTAPEAINFGS-FTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMP-------------- 224 (261)
T ss_pred ccCCCccceecCCHHHhccCC-CChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCC--------------
Confidence 223344577899999887644 8899999999999999998 999999887766665554321110
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
....++.++.++|.+||+.||++|||++++++
T Consensus 225 --------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 225 --------------RMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred --------------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 11256778999999999999999999999864
No 260
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1e-41 Score=316.95 Aligned_cols=253 Identities=19% Similarity=0.281 Sum_probs=199.3
Q ss_pred cceeeeeccCCceEEEEEEEccCCc--EEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeec----CCce
Q 015455 118 FEKIDKIGQGTYSNVYKAKDMLTGK--IVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSR----MSCS 191 (406)
Q Consensus 118 y~~~~~lg~G~~g~Vy~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~----~~~~ 191 (406)
|.+.+.||+|+||.||+|++..++. .||+|.+..........+.+.+|+.+++.++|+||+++++++... ....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3467889999999999999877765 699999876554556667788899999999999999999977432 1235
Q ss_pred EEEEEeccccc-HHHHhc-----CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeecccc
Q 015455 192 LYLVFHYMEHD-LAGLAA-----SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS 265 (406)
Q Consensus 192 ~~lv~e~~~~~-l~~~~~-----~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~ 265 (406)
.+++|||+.++ +...+. .....+++..+..++.||+.||+|||+.+|+||||||+|||+++++.++|+|||+++
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 160 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSK 160 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCccc
Confidence 78999999865 433332 223458999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCC-CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHh
Q 015455 266 FFDPNHKHP-MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYW 343 (406)
Q Consensus 266 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 343 (406)
......... .....+++.|+|||++.+.. ++.++|||||||++|+|++ |..||.+....+....+......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~------ 233 (272)
T cd05075 161 KIYNGDYYRQGRIAKMPVKWIAIESLADRV-YTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRL------ 233 (272)
T ss_pred ccCcccceecCCcccCCcccCCHHHccCCC-cChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC------
Confidence 764332211 12234577899999887654 8999999999999999999 89999887766554444321000
Q ss_pred hhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 344 KKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
.....++..+.++|..||+.||.+|||+.++++.
T Consensus 234 ----------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 234 ----------------------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred ----------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0112567789999999999999999999999864
No 261
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=4.5e-42 Score=329.59 Aligned_cols=254 Identities=23% Similarity=0.349 Sum_probs=199.3
Q ss_pred CCcceeeeeccCCceEEEEEEEc-----cCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCC
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDM-----LTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMS 189 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~ 189 (406)
++|++.+.||+|+||.||+|++. .+++.||+|+++... .......+.+|+.++.++ +|+||+++++++... .
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~-~ 84 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-TASEYKALMTELKILIHIGHHLNVVNLLGACTKP-G 84 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-CHHHHHHHHHHHHHHHhhccCcchhheeeeEecC-C
Confidence 68999999999999999999743 345789999987543 334455677899999999 899999999988654 4
Q ss_pred ceEEEEEecccccHHH-HhcCC----------------------------------------------------------
Q 015455 190 CSLYLVFHYMEHDLAG-LAASP---------------------------------------------------------- 210 (406)
Q Consensus 190 ~~~~lv~e~~~~~l~~-~~~~~---------------------------------------------------------- 210 (406)
..++++|||+.++.+. .+...
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 5689999999875444 32211
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC-CcCccccCccccc
Q 015455 211 --EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP-MTSRVVTLWYRPP 287 (406)
Q Consensus 211 --~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~-~~~~~gt~~y~aP 287 (406)
...+++..+..++.||+.||+|||+.||+||||||+|||++.++.++|+|||++..+....... .....++..|+||
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP 244 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 244 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCc
Confidence 1268999999999999999999999999999999999999999999999999998764332221 2234557789999
Q ss_pred ccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhh
Q 015455 288 ELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQE 366 (406)
Q Consensus 288 E~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (406)
|++.+.. ++.++|||||||++|||++ |..||.+....+.+.........+ .
T Consensus 245 E~~~~~~-~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~ 296 (337)
T cd05054 245 ESIFDKV-YTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRM---------------------------R 296 (337)
T ss_pred HHhcCCC-CCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCC---------------------------C
Confidence 9987754 8999999999999999998 999998765544433332210000 0
Q ss_pred hcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 367 TFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 367 ~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
.....++++.+++.+||+.+|++|||+.++++|
T Consensus 297 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 297 APEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred CCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 012456789999999999999999999999875
No 262
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.8e-41 Score=314.45 Aligned_cols=252 Identities=23% Similarity=0.362 Sum_probs=203.5
Q ss_pred CCcceeeeeccCCceEEEEEEEccC---CcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLT---GKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~ 192 (406)
++|++.+.||+|+||.||+|++..+ ...||+|.++... .......+.+|+.+++.++||||+++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~ 80 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKS--RPV 80 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecC--Cce
Confidence 6799999999999999999987544 4589999886543 334455678899999999999999999988764 458
Q ss_pred EEEEeccccc-HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC
Q 015455 193 YLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 193 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~ 271 (406)
+++|||+.++ +...+......+++..+..++.|++.||+|||+.+|+|+||||+|||+++++.++|+|||++.......
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd05033 81 MIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE 160 (266)
T ss_pred EEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence 9999999875 555555555689999999999999999999999999999999999999999999999999998875222
Q ss_pred CC-CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCC
Q 015455 272 KH-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLP 349 (406)
Q Consensus 272 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 349 (406)
.. ......++..|+|||.+.+.. ++.++||||||+++|+|++ |..||......+....+.+....+.
T Consensus 161 ~~~~~~~~~~~~~y~~Pe~~~~~~-~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~---------- 229 (266)
T cd05033 161 ATYTTKGGKIPIRWTAPEAIAYRK-FTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPP---------- 229 (266)
T ss_pred cceeccCCCCCccccChhhhccCC-CccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCC----------
Confidence 11 111223467899999887644 8999999999999999998 9999987776666555543211110
Q ss_pred CcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 350 NATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
....++.+.+|+..||+.||++|||+.+++++
T Consensus 230 ------------------~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 230 ------------------PMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred ------------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 12567889999999999999999999999864
No 263
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.1e-41 Score=314.31 Aligned_cols=249 Identities=21% Similarity=0.333 Sum_probs=200.9
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|.+.+.||+|+||.||+|+.. .+..||+|.+...... ...+.+|+.+++.++||||+++++++... ...+++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv 77 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMKLSHEKLVQLYGVCTKQ--RPIYIV 77 (256)
T ss_pred HHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCccc---HHHHHHHHHHHhcCCCCCeeeEEEEEccC--CCcEEE
Confidence 57999999999999999999753 4456999988754432 34577899999999999999999998764 458999
Q ss_pred Eeccccc-HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 196 FHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 196 ~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
|||+.++ +.+.+......+++..++.++.||+.||+|||+.|++|+||||+|||++.++.+||+|||+++.........
T Consensus 78 ~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~ 157 (256)
T cd05113 78 TEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTS 157 (256)
T ss_pred EEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceee
Confidence 9999875 444444444578999999999999999999999999999999999999999999999999998664332222
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
.....++..|+|||++.+.. ++.++|||||||++|+|++ |..||...+..+....+.+....+.
T Consensus 158 ~~~~~~~~~y~~pe~~~~~~-~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------- 222 (256)
T cd05113 158 SVGSKFPVRWSPPEVLLYSK-FSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYR-------------- 222 (256)
T ss_pred cCCCccChhhCCHHHHhcCc-ccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCC--------------
Confidence 22334567899999987644 8899999999999999998 9999988777666665543211110
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
....++.+.+++..||+.||.+|||+.+++.+
T Consensus 223 --------------~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 223 --------------PHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred --------------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 01356789999999999999999999999864
No 264
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=9.6e-42 Score=324.54 Aligned_cols=251 Identities=22% Similarity=0.327 Sum_probs=200.2
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcE----EEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCce
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKI----VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS 191 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~----vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~ 191 (406)
.+|++.+.||+|+||.||+|++..++.. ||+|.+.... .......+.+|+.+++.++||||+++++++... .
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~---~ 82 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS---T 82 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC---C
Confidence 6799999999999999999987666654 8999986432 334456678899999999999999999998763 3
Q ss_pred EEEEEecccc-cHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 192 LYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 192 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
.+++++|+.+ ++.+.+......+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.....
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 162 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAD 162 (316)
T ss_pred ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCC
Confidence 6788999886 455666555567899999999999999999999999999999999999999999999999999877543
Q ss_pred CCCC-CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCC
Q 015455 271 HKHP-MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348 (406)
Q Consensus 271 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 348 (406)
.... .....++..|+|||++.+.. ++.++|||||||++|||++ |..||.+....+... +......++
T Consensus 163 ~~~~~~~~~~~~~~y~apE~~~~~~-~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~-~~~~~~~~~--------- 231 (316)
T cd05108 163 EKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-ILEKGERLP--------- 231 (316)
T ss_pred CcceeccCCccceeecChHHhccCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHH-HHhCCCCCC---------
Confidence 3221 12233467899999987654 8999999999999999997 999998876554433 222110000
Q ss_pred CCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 349 PNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
..+..+.++.++|..||..||.+|||+.+++.+
T Consensus 232 ------------------~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 232 ------------------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred ------------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 012456778999999999999999999999875
No 265
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.6e-41 Score=312.15 Aligned_cols=245 Identities=22% Similarity=0.358 Sum_probs=195.0
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEecccc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH 201 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~ 201 (406)
+.||+|+||.||+|++..+++.||+|.+... ...+....+.+|+++++.++||||+++++++... ...++||||+.+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~ 77 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK--QPIYIVMELVQG 77 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC--CCeEEEEeeccC
Confidence 3689999999999999889999999987643 3445556788999999999999999999998774 458999999987
Q ss_pred cH-HHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC-cCcc
Q 015455 202 DL-AGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM-TSRV 279 (406)
Q Consensus 202 ~l-~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~-~~~~ 279 (406)
+. .+.+......+++..++.++.|++.||.|||+.|++||||||+|||++.++.+||+|||++........... ....
T Consensus 78 ~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 157 (252)
T cd05084 78 GDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ 157 (252)
T ss_pred CcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence 54 444444455789999999999999999999999999999999999999999999999999876543211111 1112
Q ss_pred ccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCC
Q 015455 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPRE 358 (406)
Q Consensus 280 gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (406)
.+..|+|||.+.+.. ++.++|||||||++|+|++ |..||...+.......+......
T Consensus 158 ~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~--------------------- 215 (252)
T cd05084 158 IPVKWTAPEALNYGR-YSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRL--------------------- 215 (252)
T ss_pred CceeecCchhhcCCC-CChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCC---------------------
Confidence 345799999887654 8899999999999999998 88999876665544433221100
Q ss_pred chhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 359 PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
......++.+.+|+.+||+.||++|||+.++++
T Consensus 216 -------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 216 -------PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred -------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 001245778999999999999999999999975
No 266
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=5.5e-42 Score=316.67 Aligned_cols=252 Identities=32% Similarity=0.433 Sum_probs=205.7
Q ss_pred eccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEeccccc
Q 015455 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD 202 (406)
Q Consensus 124 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~~ 202 (406)
||.|+||.||++++..+|+.||+|.+..... .......+.+|++++.+++||||+++++.+.. ....|+++||+.++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~ 78 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQG--KKNLYLVMEYLPGG 78 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheec--CcEEEEEEecCCCC
Confidence 6899999999999988899999999875543 23455678889999999999999999988876 45689999999875
Q ss_pred HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC-------CCC
Q 015455 203 LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK-------HPM 275 (406)
Q Consensus 203 l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~-------~~~ 275 (406)
.+..+..+...+++..+..++.||+.||+|||+.|++|+||+|+||+++.++.++|+|||++........ ...
T Consensus 79 ~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 158 (265)
T cd05579 79 DLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKED 158 (265)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccc
Confidence 5544444434899999999999999999999999999999999999999999999999999876543211 122
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCC
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFK 355 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 355 (406)
....++..|+|||.+.+.. ++.++|+||||+++|+|++|..||......+....+......++.
T Consensus 159 ~~~~~~~~~~~Pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------- 222 (265)
T cd05579 159 KRIVGTPDYIAPEVILGQG-HSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPE--------------- 222 (265)
T ss_pred cCcccCccccCHHHhcCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCc---------------
Confidence 3456788999999887655 888999999999999999999999888776666555431110000
Q ss_pred CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCH---HHHhcCcccccc
Q 015455 356 PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTA---TVALNSEVSYQF 405 (406)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta---~elL~h~~f~~~ 405 (406)
...+++.+.+||.+||+.||.+|||+ .++|+||||+++
T Consensus 223 ------------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 223 ------------DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred ------------cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 01247889999999999999999999 999999999864
No 267
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.5e-41 Score=322.02 Aligned_cols=255 Identities=27% Similarity=0.456 Sum_probs=210.7
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
+.|+..+.||+|+||.||+|++..++..+|+|.+..... .......+.+|+++++.++|+|++++++++... ...++
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~l 92 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE--HTAWL 92 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcC--CeeEE
Confidence 568889999999999999999988999999999875432 334455677899999999999999999998874 45899
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
||||+.+++...+......+++..+..++.|++.||.|||+.+++||||+|+||+++.++.++|+|||++......
T Consensus 93 v~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~---- 168 (308)
T cd06634 93 VMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA---- 168 (308)
T ss_pred EEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc----
Confidence 9999998888777665667999999999999999999999999999999999999999999999999998765432
Q ss_pred CcCccccCcccccccccC--CccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 275 MTSRVVTLWYRPPELLLG--ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~--~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
....+++.|+|||.+.+ ...++.++|||||||++|+|++|..||...+..+....+.......
T Consensus 169 -~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-------------- 233 (308)
T cd06634 169 -NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA-------------- 233 (308)
T ss_pred -ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCC--------------
Confidence 23467889999998752 2337889999999999999999999998766554444333211000
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.....++..+.+||++||+.+|.+|||+.+++.|||+..
T Consensus 234 -------------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 234 -------------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred -------------cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence 001246778999999999999999999999999999863
No 268
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.8e-41 Score=314.44 Aligned_cols=253 Identities=31% Similarity=0.473 Sum_probs=202.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCC-CChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDN-LEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
++|++.+.||+|+||.||+|++..+++.||||.+.... ........+.+|+.+++.++||||+++++++... ...++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~~ 79 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED--NELNI 79 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC--CeEEE
Confidence 57999999999999999999998999999999886533 3445556788899999999999999999998874 46899
Q ss_pred EEecccccHHH-Hhc---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 195 VFHYMEHDLAG-LAA---SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 195 v~e~~~~~l~~-~~~---~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
++||++++.+. .+. .....+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~ 159 (267)
T cd08228 80 VLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred EEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccch
Confidence 99999975443 332 23456899999999999999999999999999999999999999999999999999876433
Q ss_pred CCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCCHHHhhhcCC
Q 015455 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTE--VEQLHKIYKLCGSPSEEYWKKSKL 348 (406)
Q Consensus 271 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~ 348 (406)
.. ......+++.|+|||.+.+.. ++.++|+||||+++|+|++|+.||..... ......+ ...+.++.
T Consensus 160 ~~-~~~~~~~~~~~~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~-------- 228 (267)
T cd08228 160 TT-AAHSLVGTPYYMSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKI-EQCDYPPL-------- 228 (267)
T ss_pred hH-HHhcCCCCccccChhhhccCC-CCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHH-hcCCCCCC--------
Confidence 21 122346788999999887654 88999999999999999999999965432 2222222 11111110
Q ss_pred CCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 349 PNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
.....+..+.++|.+||+.||++|||+.++|+.
T Consensus 229 ------------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 229 ------------------PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred ------------------ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence 012456779999999999999999999999863
No 269
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=8.5e-42 Score=318.78 Aligned_cols=251 Identities=24% Similarity=0.344 Sum_probs=202.9
Q ss_pred CCcceeeeeccCCceEEEEEEEc-----cCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCc
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDM-----LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~ 190 (406)
++|.+.+.||+|+||.||+|.+. .++..||+|.+.... ..+....+.+|+++++.++|+||+++++++... .
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~ 81 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA-SNDARKDFEREAELLTNFQHENIVKFYGVCTEG--D 81 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC-CHHHHHHHHHHHHHHHhcCCCCchheeeEEecC--C
Confidence 67999999999999999999864 335789999986543 333456788999999999999999999998874 5
Q ss_pred eEEEEEecccccHHH-HhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcE
Q 015455 191 SLYLVFHYMEHDLAG-LAAS-------------PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVL 256 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~-~~~~-------------~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~ 256 (406)
..+++|||+.++.+. .+.. ....+++..+..++.|++.||.|||+.|++||||||+||+++.++.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeE
Confidence 699999999875444 3322 12458899999999999999999999999999999999999999999
Q ss_pred EEeeeccccccCCCCC-CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHH
Q 015455 257 KIADFGLASFFDPNHK-HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKL 334 (406)
Q Consensus 257 kl~DFgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~ 334 (406)
+|+|||++........ .......+++.|+|||++.+.. ++.++|||||||++|+|++ |..||.+.+..+....+...
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~ 240 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRK-FTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQG 240 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCC-cchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence 9999999976533221 1123345678899999987754 8999999999999999998 99999888777666555421
Q ss_pred hCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 335 CGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
... .....++..+.++|.+||+.||.+|||+.|+++
T Consensus 241 ~~~----------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 241 RLL----------------------------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred CcC----------------------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 110 011256788999999999999999999999985
No 270
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=7.6e-42 Score=321.80 Aligned_cols=257 Identities=27% Similarity=0.455 Sum_probs=207.8
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
.++|++.+.||+|+||.||++.+..+++.||+|.+..... ...+.+.+|+.+++.++|||++++++++... ...|+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~--~~~~l 93 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVG--DELWV 93 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc--hHHHHHHHHHHHHhhcCCCCeeehhheeeeC--CcEEE
Confidence 3689999999999999999999888999999999865432 2345678899999999999999999998874 45899
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
|+||+.++.+..+... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.........
T Consensus 94 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~- 171 (293)
T cd06647 94 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK- 171 (293)
T ss_pred EEecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccc-
Confidence 9999987655544333 25789999999999999999999999999999999999999999999999998766543321
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
.....+++.|+|||.+.+. .++.++|+|||||++|+|++|+.||...+.......+... +.+.
T Consensus 172 ~~~~~~~~~y~~PE~~~~~-~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~-~~~~--------------- 234 (293)
T cd06647 172 RSTMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPE--------------- 234 (293)
T ss_pred cccccCChhhcCchhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcC-CCCC---------------
Confidence 2334688999999988764 4889999999999999999999999876654433222110 0000
Q ss_pred CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
......++..+.++|+.||+.||.+|||+.+++.|+||+.
T Consensus 235 ----------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~ 274 (293)
T cd06647 235 ----------LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKI 274 (293)
T ss_pred ----------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhc
Confidence 0011245677999999999999999999999999999984
No 271
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.6e-41 Score=312.46 Aligned_cols=248 Identities=24% Similarity=0.378 Sum_probs=200.2
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.+.||+|+||.||+|.+ .+++.||+|.++..... ...+.+|+.++++++||||+++++++... ...+++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~v~iK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv 79 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLW-NNTTPVAVKTLKPGTMD---PKDFLAEAQIMKKLRHPKLIQLYAVCTLE--EPIYIV 79 (261)
T ss_pred hheeeEEEecccCCccEEEEEe-cCCeEEEEEeeCCCccc---HHHHHHHHHHHHHCCCCCccceeEEEecC--CCeeee
Confidence 6799999999999999999986 45678999998754432 34577899999999999999999988764 458999
Q ss_pred Eecccc-cHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 196 FHYMEH-DLAGLAASP-EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 196 ~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
|||+.+ ++.+.+... ...+++..+..++.|++.||.|||+.|++||||||+||++++++.++|+|||++.........
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05068 80 TELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE 159 (261)
T ss_pred eecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCccc
Confidence 999965 555555433 357899999999999999999999999999999999999999999999999999877533222
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
.......+..|+|||++.+.. ++.++||||||+++|+|++ |+.||.+.+.......+......+
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~-------------- 224 (261)
T cd05068 160 AREGAKFPIKWTAPEAALYNR-FSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMP-------------- 224 (261)
T ss_pred ccCCCcCceeccCccccccCC-CCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC--------------
Confidence 112222346799999887644 8999999999999999999 999999887766665553321100
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.....+..+.+++.+||+.||.+|||+.++++
T Consensus 225 --------------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 225 --------------CPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred --------------CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 01246788999999999999999999999875
No 272
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=3.6e-41 Score=309.66 Aligned_cols=259 Identities=31% Similarity=0.508 Sum_probs=210.7
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~ 196 (406)
+|++.+.||+|++|.||+|.+..+++.|++|++..........+.+.+|+.++++++||||+++++.+........++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 47888999999999999999988999999999987655455677888999999999999999999988875336799999
Q ss_pred ecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC-CC
Q 015455 197 HYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH-PM 275 (406)
Q Consensus 197 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~-~~ 275 (406)
||++++.+..+......+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+......... ..
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 160 (260)
T cd06606 81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGT 160 (260)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccc
Confidence 99976555444444448999999999999999999999999999999999999999999999999999887654321 12
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCC
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFK 355 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 355 (406)
....++..|+|||.+.+.. ++.++||||||+++|+|++|..||...... ...+.......
T Consensus 161 ~~~~~~~~y~~pE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~----------------- 220 (260)
T cd06606 161 GSVRGTPYWMAPEVIRGEE-YGRAADIWSLGCTVIEMATGKPPWSELGNP--MAALYKIGSSG----------------- 220 (260)
T ss_pred cCCCCCccccCHhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCch--HHHHHhccccC-----------------
Confidence 3456789999999887654 889999999999999999999999877621 11221111000
Q ss_pred CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 356 PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
........+++.+.+||.+||+.||.+|||+.+++.||||
T Consensus 221 -------~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 221 -------EPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred -------CCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 0001112457889999999999999999999999999997
No 273
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.4e-41 Score=313.44 Aligned_cols=249 Identities=21% Similarity=0.333 Sum_probs=199.9
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
.+|++.+.||+|+||.||+|++. ++..+|+|.+...... ...+.+|+++++.++||||+++++++... ...|++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~lv 77 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMS---EDDFIEEAKVMMKLSHPNLVQLYGVCTKQ--RPIFIV 77 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEEEEEEEEcCC--CceEEE
Confidence 46899999999999999999864 5678999998654432 23467799999999999999999988764 468999
Q ss_pred Eeccccc-HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 196 FHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 196 ~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
|||++++ +.+.+......+++..++.++.||+.||+|||+.|++||||||+||+++.++.+||+|||++..........
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~ 157 (256)
T cd05059 78 TEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTS 157 (256)
T ss_pred EecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccc
Confidence 9999764 555555545578999999999999999999999999999999999999999999999999997654322211
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
.....++..|+|||.+.+.. ++.++||||||+++|+|++ |..||...+..+....+......
T Consensus 158 ~~~~~~~~~y~~Pe~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---------------- 220 (256)
T cd05059 158 SQGTKFPVKWAPPEVFDYSR-FSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRL---------------- 220 (256)
T ss_pred cCCCCCCccccCHHHhccCC-CCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcC----------------
Confidence 12223355799999887654 8999999999999999999 89999887766655544321100
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
......++.+.+++.+||+.+|++|||+.++++.
T Consensus 221 ------------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 221 ------------YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred ------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 0112467889999999999999999999999864
No 274
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.4e-41 Score=320.27 Aligned_cols=260 Identities=24% Similarity=0.378 Sum_probs=206.4
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCceEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~~~~ 193 (406)
.++|++.+.||+|+||.||+|.+..+++.||||.+....... ....+..|+.++... +||||+++++++... ...|
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--~~~~ 90 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKE-ENKRILMDLDVVLKSHDCPYIVKCYGYFITD--SDVF 90 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChH-HHHHHHHHHHHHHhccCCCchHhhheeeecC--CeEE
Confidence 478999999999999999999998889999999997654332 334455677766666 599999999999874 4699
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN-NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK 272 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~ 272 (406)
++|||+++.+..........+++..+..++.||+.||+|||+ .||+||||+|+||+++.++.++|+|||++..+.....
T Consensus 91 ~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~ 170 (296)
T cd06618 91 ICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA 170 (296)
T ss_pred EEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc
Confidence 999999987777666555689999999999999999999997 5999999999999999999999999999987643222
Q ss_pred CCCcCccccCcccccccccCC---ccCCCccchHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCCHHHhhhcCC
Q 015455 273 HPMTSRVVTLWYRPPELLLGA---TDYGVGVDLWSAGCILAELLAGKPIMPGRTE-VEQLHKIYKLCGSPSEEYWKKSKL 348 (406)
Q Consensus 273 ~~~~~~~gt~~y~aPE~~~~~---~~~~~~~DvwslGv~l~ell~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~ 348 (406)
.....++..|+|||.+.+. ..++.++||||||+++|+|++|+.||..... .+.+..+... ... ..
T Consensus 171 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~---~~~------~~ 239 (296)
T cd06618 171 --KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQE---EPP------SL 239 (296)
T ss_pred --ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcC---CCC------CC
Confidence 2334578899999998653 2378899999999999999999999976432 2223322221 000 00
Q ss_pred CCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 349 PNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
+ ....+++++.+||.+||+.||.+|||+.++++||||+.+
T Consensus 240 ~-----------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 279 (296)
T cd06618 240 P-----------------PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRY 279 (296)
T ss_pred C-----------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhcc
Confidence 0 001467789999999999999999999999999999863
No 275
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.6e-41 Score=318.69 Aligned_cols=250 Identities=21% Similarity=0.325 Sum_probs=200.3
Q ss_pred CCcceeeeeccCCceEEEEEEE-----ccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCc
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKD-----MLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~ 190 (406)
++|.+.+.||+|+||+||++.+ ..++..||+|.+... .......+.+|++++++++||||+++++++.. ..
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~ 80 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVE--GD 80 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec--CC
Confidence 6799999999999999999975 234567999987643 23445678889999999999999999999876 45
Q ss_pred eEEEEEecccccHHH-HhcCC------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEE
Q 015455 191 SLYLVFHYMEHDLAG-LAASP------------EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLK 257 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~-~~~~~------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~k 257 (406)
..+++|||+.++.+. ++... ...+++..++.++.|++.||+|||+.|++||||||+|||+++++.++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEE
Confidence 689999999875444 33221 23589999999999999999999999999999999999999999999
Q ss_pred EeeeccccccCCCCCC-CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHh
Q 015455 258 IADFGLASFFDPNHKH-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLC 335 (406)
Q Consensus 258 l~DFgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~ 335 (406)
|+|||++......... ......++..|+|||++.+. .++.++|||||||++|+|++ |.+||......+....+....
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~ 239 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR-KFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR 239 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence 9999999865432211 12233457789999988764 48999999999999999998 999998887766666554321
Q ss_pred CCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 336 GSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.. .....+++++.+|+.+||+.||.+|||+.++++
T Consensus 240 ~~----------------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 240 VL----------------------------QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred cC----------------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 00 001256778999999999999999999999854
No 276
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-43 Score=332.58 Aligned_cols=261 Identities=23% Similarity=0.317 Sum_probs=230.3
Q ss_pred cccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCce
Q 015455 113 RRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS 191 (406)
Q Consensus 113 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~ 191 (406)
....+++++..||-||||.|-+++.......+|+|++++... +....+++..|.+||...+.|+||++|..|.+ ..+
T Consensus 417 v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd--~ky 494 (732)
T KOG0614|consen 417 VKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRD--SKY 494 (732)
T ss_pred cchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhcc--chh
Confidence 345678899999999999999998665555699999876544 55667788899999999999999999888777 678
Q ss_pred EEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC
Q 015455 192 LYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 192 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~ 271 (406)
+|+.||-|-|+.+......++.|.+..++.++..+++|++|||++|||+|||||+|.+++.+|-+||.|||+|+.++.+.
T Consensus 495 vYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~ 574 (732)
T KOG0614|consen 495 VYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR 574 (732)
T ss_pred hhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCC
Confidence 99999999888777777778899999999999999999999999999999999999999999999999999999997665
Q ss_pred CCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCc
Q 015455 272 KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351 (406)
Q Consensus 272 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 351 (406)
. +-+++|||.|.|||++++.. .+.++|.||||+++|||++|.+||.+.++...+..|.+.+...
T Consensus 575 K--TwTFcGTpEYVAPEIILnKG-HD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i------------- 638 (732)
T KOG0614|consen 575 K--TWTFCGTPEYVAPEIILNKG-HDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI------------- 638 (732)
T ss_pred c--eeeecCCcccccchhhhccC-cchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh-------------
Confidence 5 56789999999999998765 8999999999999999999999999999999999998864211
Q ss_pred ccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcC-----HHHHhcCcccccc
Q 015455 352 TLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT-----ATVALNSEVSYQF 405 (406)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----a~elL~h~~f~~~ 405 (406)
+.++.++..+.+||+++...+|.+|.. +.++-.|.||..+
T Consensus 639 --------------~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gf 683 (732)
T KOG0614|consen 639 --------------EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGF 683 (732)
T ss_pred --------------hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcC
Confidence 223478999999999999999999986 8999999999754
No 277
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-42 Score=299.65 Aligned_cols=258 Identities=27% Similarity=0.384 Sum_probs=200.6
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeee---cCCce
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTS---RMSCS 191 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~---~~~~~ 191 (406)
.++|.+.+.||+|||+-||+++...++..||+|++.... .+..+...+|++..++++|||+++++++... +....
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 378999999999999999999999999999999998765 4556778889999999999999999887642 23345
Q ss_pred EEEEEeccccc-HHHHhc---CCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCCeEEcCCCcEEEeeecccc
Q 015455 192 LYLVFHYMEHD-LAGLAA---SPEVKFTEPQVKCYMHQLLSGLEHCHNNG--VLHRDIKGSNLLIDDDGVLKIADFGLAS 265 (406)
Q Consensus 192 ~~lv~e~~~~~-l~~~~~---~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFgla~ 265 (406)
.|++++|...+ +++.+. ..+..+++.++..|+.+|++||.+||+.. +.||||||.|||+++.+.++|.|||.+.
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCcc
Confidence 89999998764 666543 34458999999999999999999999998 9999999999999999999999999997
Q ss_pred ccCCCCCC--------CCcCccccCcccccccccC--CccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Q 015455 266 FFDPNHKH--------PMTSRVVTLWYRPPELLLG--ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLC 335 (406)
Q Consensus 266 ~~~~~~~~--------~~~~~~gt~~y~aPE~~~~--~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~ 335 (406)
...-.-.. .......|..|+|||.+.- ....+.++|||||||+||+|+.|..||... ++.-
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~---------~~~G 248 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERI---------YQQG 248 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHH---------hhcC
Confidence 64311100 1122356899999998852 223678999999999999999999999532 2111
Q ss_pred CCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 336 GSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
+...-.. .+..+..|+. ..+|..+.+||+.||+.||.+||++.++|.+
T Consensus 249 gSlaLAv------~n~q~s~P~~----------~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 249 GSLALAV------QNAQISIPNS----------SRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred CeEEEee------eccccccCCC----------CCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 1100000 0001111111 2478899999999999999999999999875
No 278
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.7e-41 Score=313.13 Aligned_cols=244 Identities=23% Similarity=0.309 Sum_probs=196.9
Q ss_pred eeccCCceEEEEEEE--ccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEeccc
Q 015455 123 KIGQGTYSNVYKAKD--MLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYME 200 (406)
Q Consensus 123 ~lg~G~~g~Vy~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~ 200 (406)
+||+|+||.||+|.. ..++..||+|+++.........+.+.+|+.+++.++||||+++++++.. ...+++|||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~lv~e~~~ 78 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA---ESWMLVMELAE 78 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC---CCcEEEEecCC
Confidence 589999999999964 4567899999987655555566778889999999999999999998754 24789999999
Q ss_pred ccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC--CcCc
Q 015455 201 HDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSR 278 (406)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~--~~~~ 278 (406)
++.+..+......+++..+..++.|++.||.|||+.|++||||||.||+++.++.+||+|||++.......... ....
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05116 79 LGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHG 158 (257)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCC
Confidence 76555444445579999999999999999999999999999999999999999999999999998765333211 1222
Q ss_pred cccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCC
Q 015455 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPR 357 (406)
Q Consensus 279 ~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (406)
.++..|+|||.+.+. .++.++|+|||||++|||++ |..||.+.+..+....+.+... +
T Consensus 159 ~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~-~------------------- 217 (257)
T cd05116 159 KWPVKWYAPECMNYY-KFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER-M------------------- 217 (257)
T ss_pred CCCccccCHhHhccC-CcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC-C-------------------
Confidence 346789999988654 48889999999999999998 9999988777666555533110 0
Q ss_pred CchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 358 EPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.....+++++.+||..||+.||.+|||+.++..
T Consensus 218 --------~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 218 --------ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred --------CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 011257888999999999999999999998864
No 279
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.7e-41 Score=315.18 Aligned_cols=247 Identities=26% Similarity=0.345 Sum_probs=193.4
Q ss_pred CCcceeeee--ccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCceE
Q 015455 116 DSFEKIDKI--GQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 116 ~~y~~~~~l--g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~~~ 192 (406)
+.|++.+.+ |+|+||.||++++..++..+|+|.+........ |+.....+ +|||++++++.+... ...
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-------e~~~~~~~~~h~~iv~~~~~~~~~--~~~ 84 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-------EPMVHQLMKDNPNFIKLYYSVTTL--KGH 84 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-------hHHHHHHhhcCCCEEEEEEEEecC--Cee
Confidence 456666666 999999999999999999999999875432211 22222222 799999999998874 469
Q ss_pred EEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCC-cEEEeeeccccccCCCC
Q 015455 193 YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNH 271 (406)
Q Consensus 193 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-~~kl~DFgla~~~~~~~ 271 (406)
|+||||++++.+..+......+++..++.++.||+.||.|||+.|++||||||+||+++.++ .++|+|||++......
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~- 163 (267)
T PHA03390 85 VLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP- 163 (267)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC-
Confidence 99999998754444444444899999999999999999999999999999999999999998 9999999999866432
Q ss_pred CCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHhhhcCCCC
Q 015455 272 KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQ-LHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 272 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
....++..|+|||++.+.. ++.++||||||+++|+|++|..||........ ...+..... .
T Consensus 164 ----~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~------------ 225 (267)
T PHA03390 164 ----SCYDGTLDYFSPEKIKGHN-YDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQ-K------------ 225 (267)
T ss_pred ----ccCCCCCcccChhhhcCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhc-c------------
Confidence 2346789999999987654 88999999999999999999999986544332 111111100 0
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcC-HHHHhcCcccc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT-ATVALNSEVSY 403 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-a~elL~h~~f~ 403 (406)
.....+.+++.+.+||.+||+.||.+||+ .+++|+||||+
T Consensus 226 -------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~ 266 (267)
T PHA03390 226 -------------KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK 266 (267)
T ss_pred -------------cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence 00111357889999999999999999997 59999999996
No 280
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.8e-41 Score=316.46 Aligned_cols=253 Identities=17% Similarity=0.246 Sum_probs=198.9
Q ss_pred cCCcceeeeeccCCceEEEEEEEc-----cCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCC
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDM-----LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMS 189 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~ 189 (406)
.++|++.+.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~-- 81 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG-- 81 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC--
Confidence 378999999999999999999754 235689999886433 223345678899999999999999999988763
Q ss_pred ceEEEEEecccccHHH-HhcCC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEe
Q 015455 190 CSLYLVFHYMEHDLAG-LAASP---------EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIA 259 (406)
Q Consensus 190 ~~~~lv~e~~~~~l~~-~~~~~---------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~ 259 (406)
...+++|||++++.+. ++... ...+++..+..++.|++.||.|||+.|++|+||||+|||+++++.++|+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~ 161 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG 161 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEEC
Confidence 4589999999875444 33221 1246788899999999999999999999999999999999999999999
Q ss_pred eeccccccCCCCCC-CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCC
Q 015455 260 DFGLASFFDPNHKH-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGS 337 (406)
Q Consensus 260 DFgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~ 337 (406)
|||++......... ......+++.|+|||++.+.. ++.++|||||||++|||++ |..||.+.+..+....+......
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~ 240 (277)
T cd05062 162 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLL 240 (277)
T ss_pred CCCCccccCCcceeecCCCCccCHhhcChhHhhcCC-cCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC
Confidence 99998765432211 112234578899999987644 8999999999999999999 78999888776655544331100
Q ss_pred CCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 338 PSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
......++.+.++|.+||+.||++|||+.+++++
T Consensus 241 ----------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 241 ----------------------------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred ----------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0112467789999999999999999999999864
No 281
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.5e-41 Score=322.78 Aligned_cols=273 Identities=23% Similarity=0.286 Sum_probs=197.7
Q ss_pred CceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEecccccHHHHh
Q 015455 128 TYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLA 207 (406)
Q Consensus 128 ~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~ 207 (406)
++|.||+++...+++.||+|++............+.+|+.+++.++|+||+++++++... ...+++|||+.++.+..+
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~~ 89 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVD--SELYVVSPLMAYGSCEDL 89 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecC--CeEEEEEeccCCCCHHHH
Confidence 445566666667999999999987655556677899999999999999999999998774 458999999997655433
Q ss_pred -cC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC------CCCcCcc
Q 015455 208 -AS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK------HPMTSRV 279 (406)
Q Consensus 208 -~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~------~~~~~~~ 279 (406)
.. ....+++..++.++.|++.||.|||+.+|+||||||+||+++.++.+||+|||.+........ .......
T Consensus 90 l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (314)
T cd08216 90 LKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSV 169 (314)
T ss_pred HHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccccccccccccccc
Confidence 32 234689999999999999999999999999999999999999999999999999875532211 1112345
Q ss_pred ccCcccccccccCC-ccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCC---
Q 015455 280 VTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFK--- 355 (406)
Q Consensus 280 gt~~y~aPE~~~~~-~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--- 355 (406)
++..|+|||++.+. ..++.++|+|||||++|+|++|..||.............. +..+. .+.....+......
T Consensus 170 ~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~ 246 (314)
T cd08216 170 KNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVR--GTVPC-LLDKSTYPLYEDSMSQS 246 (314)
T ss_pred ccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--ccCcc-ccccCchhhhcCCcCcc
Confidence 67889999998653 3488999999999999999999999987665443322211 11110 00000000000000
Q ss_pred -----CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 356 -----PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 356 -----~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
........-......++.++.+||..||..||++|||+.++|+||||+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~ 301 (314)
T cd08216 247 RSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQC 301 (314)
T ss_pred cccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhh
Confidence 00000000011112345678899999999999999999999999999864
No 282
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.1e-41 Score=311.45 Aligned_cols=252 Identities=26% Similarity=0.427 Sum_probs=209.7
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~ 196 (406)
+|++.+.||+|+||.||++++..+++.||+|.+............+.+|+.+++.++|+||+++++++... ...|+++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~v~ 78 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDG--NKLCIVM 78 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC--CEEEEEe
Confidence 48899999999999999999989999999999987655555566778899999999999999999988774 5699999
Q ss_pred ecccccHH-HHhcC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC
Q 015455 197 HYMEHDLA-GLAAS---PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK 272 (406)
Q Consensus 197 e~~~~~l~-~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~ 272 (406)
||+++..+ ..+.. ....+++..++.++.|++.||+|||+.|++|+||+|+||+++.++.+||+|||++......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-- 156 (256)
T cd08530 79 EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN-- 156 (256)
T ss_pred hhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC--
Confidence 99987544 43322 2457899999999999999999999999999999999999999999999999999877544
Q ss_pred CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 273 HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 273 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
......+++.|+|||.+.+.. ++.++|+||||+++|+|++|+.||...+..+....+......
T Consensus 157 -~~~~~~~~~~~~~Pe~~~~~~-~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------------- 219 (256)
T cd08530 157 -MAKTQIGTPHYMAPEVWKGRP-YSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYP--------------- 219 (256)
T ss_pred -CcccccCCccccCHHHHCCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC---------------
Confidence 123356789999999987644 888999999999999999999999888766554444321100
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
.....++.++.++|.+||+.+|.+|||+.++|+||++
T Consensus 220 -------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 220 -------------PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred -------------CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 0112467789999999999999999999999999975
No 283
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.5e-41 Score=316.42 Aligned_cols=252 Identities=21% Similarity=0.357 Sum_probs=200.5
Q ss_pred CCcceeeeeccCCceEEEEEEEc----cCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCce
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDM----LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS 191 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~ 191 (406)
++|++.+.||+|+||+||+|... .++..||+|.+.... .......+.+|+.+++.++||||+++++++... ..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~ 81 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQE--QP 81 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC--Cc
Confidence 67999999999999999999853 456789999986433 334456788899999999999999999998764 45
Q ss_pred EEEEEeccccc-HHHHhcCC----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCC
Q 015455 192 LYLVFHYMEHD-LAGLAASP----------------EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDG 254 (406)
Q Consensus 192 ~~lv~e~~~~~-l~~~~~~~----------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~ 254 (406)
.|++|||+.++ +.+++... ...+++..+..++.||+.||.|||++|++||||||+|||++.++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQL 161 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCC
Confidence 89999999875 44443211 23578999999999999999999999999999999999999999
Q ss_pred cEEEeeeccccccCCCCC-CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 015455 255 VLKIADFGLASFFDPNHK-HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIY 332 (406)
Q Consensus 255 ~~kl~DFgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~ 332 (406)
.+||+|||+++....... .......++..|+|||++.+.. ++.++|||||||++|||++ |..||.+.........+.
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~ 240 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGK-FSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVR 240 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 999999999987643321 1123344577899999887654 8999999999999999998 999998877655544443
Q ss_pred HHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 333 KLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
.... + .....+++.+.++|..||+.||.+||++.+++++
T Consensus 241 ~~~~-~---------------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 241 KRQL-L---------------------------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred cCCc-C---------------------------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 2110 0 0112567889999999999999999999999764
No 284
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=6.4e-41 Score=306.78 Aligned_cols=252 Identities=33% Similarity=0.555 Sum_probs=207.6
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~ 196 (406)
+|++.+.||+|++|.||++.+..+++.|++|++..... .....+.+|+++++.++|+|++++++.+... ...++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~l~~ 76 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKK--DELWIVM 76 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecC--CeEEEEE
Confidence 47889999999999999999888899999999876543 3456788899999999999999999998774 4589999
Q ss_pred ecccc-cHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 197 HYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 197 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
||+++ ++...+......+++..+..++.|++.||.+||+.|++|+||+|+||++++++.++|+|||.+........ .
T Consensus 77 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~ 154 (253)
T cd05122 77 EFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--R 154 (253)
T ss_pred ecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc--c
Confidence 99996 45444444446899999999999999999999999999999999999999999999999999987754432 3
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCC
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFK 355 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 355 (406)
....++..|+|||.+.+.. ++.++|+||||+++|+|++|+.||...+.......+... ..+. .+.
T Consensus 155 ~~~~~~~~~~~PE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~--------~~~----- 219 (253)
T cd05122 155 NTMVGTPYWMAPEVINGKP-YDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATN-GPPG--------LRN----- 219 (253)
T ss_pred cceecCCcccCHHHHcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc-CCCC--------cCc-----
Confidence 4557889999999987654 889999999999999999999999877654444333221 0000 000
Q ss_pred CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcc
Q 015455 356 PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEV 401 (406)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~ 401 (406)
...++..+.++|..||+.||++|||+.++|+|||
T Consensus 220 ------------~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 220 ------------PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred ------------ccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 0124678999999999999999999999999998
No 285
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.1e-41 Score=318.01 Aligned_cols=262 Identities=24% Similarity=0.400 Sum_probs=206.1
Q ss_pred CcceeeeeccCCceEEEEEEEc---cCCcEEEEEEEecCCC--ChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCc
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDM---LTGKIVALKKVRFDNL--EPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~ 190 (406)
+|++.+.||.|+||.||+|++. .+|..||+|++..... .....+.+.+|+.++.++ +|+||+++++.+... .
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~--~ 78 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTD--T 78 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecC--C
Confidence 4888999999999999999864 4789999999875432 223345677899999999 699999999888763 5
Q ss_pred eEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 191 SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
..|++|||++++.+.........+++..+..++.|++.||.|||+.|++||||+|+|||++.++.++|+|||++......
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 79 KLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred eEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence 68999999998655544444557899999999999999999999999999999999999999999999999999876544
Q ss_pred CCCCCcCccccCcccccccccCC-ccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCC
Q 015455 271 HKHPMTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLP 349 (406)
Q Consensus 271 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 349 (406)
.........|+..|+|||.+.+. ..++.++||||||+++|+|++|..||...........+.+......
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~---------- 228 (290)
T cd05613 159 EVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE---------- 228 (290)
T ss_pred cccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccC----------
Confidence 33333445689999999988643 2367899999999999999999999975433222222222110000
Q ss_pred CcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCc-----CHHHHhcCcccccc
Q 015455 350 NATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERL-----TATVALNSEVSYQF 405 (406)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----ta~elL~h~~f~~~ 405 (406)
....+.+++.+.+++.+||+.||.+|| ++.+++.||||+.+
T Consensus 229 ---------------~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 274 (290)
T cd05613 229 ---------------PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKI 274 (290)
T ss_pred ---------------CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccC
Confidence 001124677899999999999999997 89999999999864
No 286
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3e-41 Score=316.80 Aligned_cols=259 Identities=19% Similarity=0.256 Sum_probs=202.3
Q ss_pred cCCcceeeeeccCCceEEEEEEEcc-----CCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCC
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDML-----TGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMS 189 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~ 189 (406)
.++|++.+.||+|+||.||+|.... .+..||+|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-- 81 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG-- 81 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC--
Confidence 3789999999999999999997542 34589999876443 223344577899999999999999999988764
Q ss_pred ceEEEEEeccccc-HHHHhcCC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEe
Q 015455 190 CSLYLVFHYMEHD-LAGLAASP---------EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIA 259 (406)
Q Consensus 190 ~~~~lv~e~~~~~-l~~~~~~~---------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~ 259 (406)
...|++|||+.++ +.+.+... ...++...+..++.|++.||.|||+++|+||||||+|||++.++.++|+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~ 161 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIG 161 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEEC
Confidence 4589999999864 44444221 1345678889999999999999999999999999999999999999999
Q ss_pred eeccccccCCCCCC-CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCC
Q 015455 260 DFGLASFFDPNHKH-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGS 337 (406)
Q Consensus 260 DFgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~ 337 (406)
|||+++........ ......++..|+|||.+.+.. ++.++|+|||||++|||++ |..||.+....+....+......
T Consensus 162 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~-~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~ 240 (288)
T cd05061 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 240 (288)
T ss_pred cCCccccccccccccccCCCcccccccCHHHhccCC-CChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC
Confidence 99999865432221 112234567899999887644 8999999999999999998 78999887766655544321100
Q ss_pred CCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc------Ccccccc
Q 015455 338 PSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN------SEVSYQF 405 (406)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~------h~~f~~~ 405 (406)
......++.+.++|..||+.||.+|||+.++++ ||||..+
T Consensus 241 ----------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 241 ----------------------------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred ----------------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence 001245678999999999999999999999987 9998753
No 287
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.4e-41 Score=317.94 Aligned_cols=252 Identities=22% Similarity=0.335 Sum_probs=202.1
Q ss_pred CCcceeeeeccCCceEEEEEEEccC-----CcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCc
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLT-----GKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~ 190 (406)
.+|++.+.||+|+||.||+|.+..+ ++.||+|+++... .....+.+.+|+.++..++||||+++++++... .
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~--~ 81 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE--Q 81 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC--C
Confidence 5789999999999999999986543 5789999987543 334456688899999999999999999998875 3
Q ss_pred eEEEEEecccccHHH-HhcC---------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCC
Q 015455 191 SLYLVFHYMEHDLAG-LAAS---------------PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDG 254 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~-~~~~---------------~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~ 254 (406)
..++++||+.++.+. .+.. ....+++..+..++.|++.||.|||+.|++||||||+|||+++++
T Consensus 82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKL 161 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCC
Confidence 489999999875443 3321 123588999999999999999999999999999999999999999
Q ss_pred cEEEeeeccccccCCCCC-CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 015455 255 VLKIADFGLASFFDPNHK-HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIY 332 (406)
Q Consensus 255 ~~kl~DFgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~ 332 (406)
.+||+|||+++....... .......+++.|+|||++.+.. ++.++|||||||++|||++ |..||.+....+....+.
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~ 240 (283)
T cd05091 162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGK-FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIR 240 (283)
T ss_pred ceEecccccccccccchheeeccCccCCccccCHHHHhcCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 999999999886543221 1123345578999999987654 8899999999999999998 889998887776666654
Q ss_pred HHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 333 KLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
.....+ ....++..+.+|+..||+.||.+|||+.++++.
T Consensus 241 ~~~~~~----------------------------~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 241 NRQVLP----------------------------CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred cCCcCC----------------------------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 421110 113577889999999999999999999999874
No 288
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2.9e-41 Score=312.02 Aligned_cols=246 Identities=26% Similarity=0.405 Sum_probs=198.8
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.+.||+|+||.||+|.+ .++..||+|.+...... ...+.+|+.++++++|+|++++++++.. ...+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~-~~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~---~~~~lv 78 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTW-NGNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVSE---EPIYIV 78 (260)
T ss_pred HHhhhhheeccccCceEEEEEe-cCCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEECC---CCcEEE
Confidence 6899999999999999999986 46677999998765443 2457789999999999999999988753 347899
Q ss_pred Eeccccc-HHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 196 FHYMEHD-LAGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 196 ~e~~~~~-l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
|||+.++ +...+.. ....+++..++.++.|++.||.|||+.+++||||||+||++++++.++|+|||++.........
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05070 79 TEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT 158 (260)
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccc
Confidence 9999874 5444433 3346899999999999999999999999999999999999999999999999999876543322
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
......++..|+|||++.+.. ++.++|+||||+++|+|++ |.+||.+.+..+....+......
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--------------- 222 (260)
T cd05070 159 ARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM--------------- 222 (260)
T ss_pred cccCCCCCccccChHHHhcCC-CcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC---------------
Confidence 222334567899999886644 8899999999999999999 89999887776666555321100
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHh
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL 397 (406)
......+..+.+||.+||.+||.+|||+.+++
T Consensus 223 -------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~ 254 (260)
T cd05070 223 -------------PCPQDCPISLHELMLQCWKKDPEERPTFEYLQ 254 (260)
T ss_pred -------------CCCCcCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence 01125677899999999999999999999987
No 289
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=2.6e-41 Score=318.03 Aligned_cols=255 Identities=27% Similarity=0.435 Sum_probs=207.8
Q ss_pred cceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEe
Q 015455 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFH 197 (406)
Q Consensus 118 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e 197 (406)
|.....||+|+||.||++....+++.||+|.+.... ......+.+|+.+++.++|+|++++++++.. ....+++||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e 97 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLV--GDELWVVME 97 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc--hhHHHHHHHHHHHHHhcCCcchhheeeEEEe--CCEEEEEEe
Confidence 445578999999999999988999999999886432 2345568889999999999999999999887 456999999
Q ss_pred cccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcC
Q 015455 198 YMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTS 277 (406)
Q Consensus 198 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~ 277 (406)
|++++.+..+... ..+++..++.++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||++....... .....
T Consensus 98 ~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-~~~~~ 175 (292)
T cd06657 98 FLEGGALTDIVTH-TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKS 175 (292)
T ss_pred cCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceeccccc-ccccc
Confidence 9998666554433 368999999999999999999999999999999999999999999999999987654322 12234
Q ss_pred ccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCC
Q 015455 278 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPR 357 (406)
Q Consensus 278 ~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (406)
..+++.|+|||.+.+. .++.++|+||+|+++|+|++|..||.+.........+........
T Consensus 176 ~~~~~~y~~pE~~~~~-~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~------------------ 236 (292)
T cd06657 176 LVGTPYWMAPELISRL-PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKL------------------ 236 (292)
T ss_pred cccCccccCHHHhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCccc------------------
Confidence 5688999999988654 478999999999999999999999988776655544432110000
Q ss_pred CchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 358 EPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
.....+++.+.++|.+||+.||.+|||+.++|+||||.++
T Consensus 237 --------~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~ 276 (292)
T cd06657 237 --------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 276 (292)
T ss_pred --------CCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhcc
Confidence 0112467789999999999999999999999999999864
No 290
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-42 Score=345.52 Aligned_cols=253 Identities=25% Similarity=0.387 Sum_probs=201.7
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCC-CCCeeeEeee-eeec---C-
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD-HPNVIKLEGL-VTSR---M- 188 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~l~~~-~~~~---~- 188 (406)
..++++.+.|.+|||+.||+|++...|..||+|++-.. +....+.+.+|+++|+.|. |+|||.+++. ...+ .
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence 36789999999999999999998777799999998654 5677888999999999996 9999999983 3221 2
Q ss_pred CceEEEEEeccc-ccHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCCeEEcCCCcEEEeeeccc
Q 015455 189 SCSLYLVFHYME-HDLAGLAASP-EVKFTEPQVKCYMHQLLSGLEHCHNNG--VLHRDIKGSNLLIDDDGVLKIADFGLA 264 (406)
Q Consensus 189 ~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFgla 264 (406)
...++|.||||. +++.+++..+ ...|++.++.+|+.|+++|+++||..+ |||||||-+||||+.+|+.||||||.|
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 245789999999 5888877532 335999999999999999999999997 999999999999999999999999999
Q ss_pred cccCCCCCC-CC-------cCccccCccccccccc--CCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 015455 265 SFFDPNHKH-PM-------TSRVVTLWYRPPELLL--GATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334 (406)
Q Consensus 265 ~~~~~~~~~-~~-------~~~~gt~~y~aPE~~~--~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~ 334 (406)
.-.-..... .. -...-|+.|+|||.+. .+.+.+.|+|||+|||+||-|+....||.+.-...++..-
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~--- 270 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGN--- 270 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEecc---
Confidence 643222110 00 0123399999999974 3345899999999999999999999999876433222111
Q ss_pred hCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCc
Q 015455 335 CGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSE 400 (406)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~ 400 (406)
+.+|. ++.++..+.+||+.||+.||.+||++.+++..-
T Consensus 271 -----------Y~~P~-----------------~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~ 308 (738)
T KOG1989|consen 271 -----------YSFPP-----------------FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEI 308 (738)
T ss_pred -----------ccCCC-----------------CccHHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence 11111 136788899999999999999999999998653
No 291
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.1e-41 Score=350.45 Aligned_cols=255 Identities=29% Similarity=0.377 Sum_probs=199.3
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
++|++.+.||+|+||.||+|++..+|+.||+|++..... .....+.+.+|+.+++.++||||+++++++.+ ....|+
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d--~~~lyL 79 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSD--GDPVYY 79 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee--CCEEEE
Confidence 579999999999999999999999999999999875432 23445678889999999999999999999877 456899
Q ss_pred EEecccccHHH-HhcC----------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeecc
Q 015455 195 VFHYMEHDLAG-LAAS----------PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGL 263 (406)
Q Consensus 195 v~e~~~~~l~~-~~~~----------~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgl 263 (406)
+|||++++.+. .+.. ....+++..+..++.||+.||+|||+.||+||||||+|||++.++.++|+|||+
T Consensus 80 VMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGL 159 (932)
T PRK13184 80 TMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGA 159 (932)
T ss_pred EEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCc
Confidence 99999875444 3321 123456778899999999999999999999999999999999999999999999
Q ss_pred ccccCCCCC-----------------CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHH
Q 015455 264 ASFFDPNHK-----------------HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVE 326 (406)
Q Consensus 264 a~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~ 326 (406)
++....... ......+||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+...
T Consensus 160 Ak~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~-~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 160 AIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVP-ASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred ceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCC-CCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 987621110 0112346899999999987754 8999999999999999999999998754433
Q ss_pred HHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 327 QLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 327 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
.... .....+.. ......+|+.+.+++.+||+.||++|++..+.|..
T Consensus 239 i~~~--~~i~~P~~------------------------~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~ 285 (932)
T PRK13184 239 ISYR--DVILSPIE------------------------VAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQ 285 (932)
T ss_pred hhhh--hhccChhh------------------------ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 2211 10000000 00113578889999999999999999887666643
No 292
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=4.2e-41 Score=315.39 Aligned_cols=256 Identities=31% Similarity=0.525 Sum_probs=210.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
+.|+..+.||.|+||.||+|.+..++..||+|++..... ....+.+|+++++.++|+|++++++.+... ...|++
T Consensus 19 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~lv 93 (286)
T cd06614 19 ELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVG--DELWVV 93 (286)
T ss_pred ccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEEC--CEEEEE
Confidence 679999999999999999999888899999999976543 455677899999999999999999998874 569999
Q ss_pred Eecccc-cHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 196 FHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 196 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
+||+++ ++.+.+......+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++........ .
T Consensus 94 ~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~ 172 (286)
T cd06614 94 MEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS-K 172 (286)
T ss_pred EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh-h
Confidence 999996 55555444434899999999999999999999999999999999999999999999999999876543321 1
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccC
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
.....++..|+|||++.+.. ++.++|+|||||++|+|++|..||...+.......+.... .+..
T Consensus 173 ~~~~~~~~~y~~PE~~~~~~-~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~-------------- 236 (286)
T cd06614 173 RNSVVGTPYWMAPEVIKRKD-YGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKG-IPPL-------------- 236 (286)
T ss_pred hccccCCcccCCHhHhcCCC-CCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC-CCCC--------------
Confidence 23345788999999887654 8999999999999999999999998776655444432210 0000
Q ss_pred CCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.....++..+.+||..||+.||.+|||+.++|+|+||.+
T Consensus 237 -----------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 275 (286)
T cd06614 237 -----------KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKK 275 (286)
T ss_pred -----------cchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhc
Confidence 001236778999999999999999999999999999985
No 293
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=1e-42 Score=327.12 Aligned_cols=291 Identities=31% Similarity=0.510 Sum_probs=240.2
Q ss_pred chhhhhcccccCCCCcccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCC----
Q 015455 98 WLTAVCGEALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD---- 173 (406)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~---- 173 (406)
++....||.++ .+|.+....|+|-|++|..|.+..-|..||||+|+.+.. ..+.=++|++||++|+
T Consensus 421 YYrv~igE~LD-------~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~---M~KtGl~EleiLkKL~~AD~ 490 (752)
T KOG0670|consen 421 YYRVRIGELLD-------SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV---MHKTGLKELEILKKLNDADP 490 (752)
T ss_pred eEEEehhhhhc-------ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH---HhhhhhHHHHHHHHhhccCc
Confidence 45555666665 689999999999999999999999999999999986543 3344567999999995
Q ss_pred --CCCeeeEeeeeeecCCceEEEEEecccccHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeE
Q 015455 174 --HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAAS--PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLL 249 (406)
Q Consensus 174 --h~~iv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIl 249 (406)
--|+++++..|.. ..++|||+|.+.-+|...+.. .+..+....++.|+.|++.||..|-..||+|.||||+|||
T Consensus 491 Edk~Hclrl~r~F~h--knHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiL 568 (752)
T KOG0670|consen 491 EDKFHCLRLFRHFKH--KNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNIL 568 (752)
T ss_pred hhhhHHHHHHHHhhh--cceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceE
Confidence 3588888888777 456999999999999888754 4456888999999999999999999999999999999999
Q ss_pred EcCCC-cEEEeeeccccccCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015455 250 IDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQL 328 (406)
Q Consensus 250 l~~~~-~~kl~DFgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~ 328 (406)
+++.. .+||||||.|.....+. .+.+..+..|+|||+++|.. |+...|+||.||+||||.||+..|+|.++.+++
T Consensus 569 VNE~k~iLKLCDfGSA~~~~ene---itPYLVSRFYRaPEIiLG~~-yd~~iD~WSvgctLYElYtGkIlFpG~TNN~ML 644 (752)
T KOG0670|consen 569 VNESKNILKLCDFGSASFASENE---ITPYLVSRFYRAPEIILGLP-YDYPIDTWSVGCTLYELYTGKILFPGRTNNQML 644 (752)
T ss_pred eccCcceeeeccCcccccccccc---ccHHHHHHhccCcceeecCc-ccCCccceeeceeeEEeeccceecCCCCcHHHH
Confidence 99765 58999999999876554 46778899999999999976 999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCHHHhhhcCCCCcccCC----------------------CCCchhhhhhhhcC--CCCC-------ChHH
Q 015455 329 HKIYKLCGSPSEEYWKKSKLPNATLFK----------------------PREPYKRCIQETFK--DFPP-------SSLP 377 (406)
Q Consensus 329 ~~i~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~--~~~~-------~~~~ 377 (406)
...+.+.|.++..++....|-+..+.. ...|.+.+..+... .++. .+.+
T Consensus 645 rl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rd 724 (752)
T KOG0670|consen 645 RLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRD 724 (752)
T ss_pred HHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHH
Confidence 999999999999887776654432211 11222222222221 1332 3789
Q ss_pred HHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 378 LIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 378 li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
|+.+||..||++|.|..++|.||||+.
T Consensus 725 LLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 725 LLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred HHHHHhccChhhcCCHHHHhcCCcccC
Confidence 999999999999999999999999973
No 294
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=4e-41 Score=311.65 Aligned_cols=247 Identities=25% Similarity=0.391 Sum_probs=198.2
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.++||+|+||.||+|++..+ ..||+|.+...... .+.+.+|+++++.++||||+++++.+.. ...+++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~---~~~~lv 78 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE---EPIYIV 78 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccC---HHHHHHHHHHHHhCCCCCcceEEEEECC---CCcEEE
Confidence 6799999999999999999987544 56999998754332 3457789999999999999999987643 347999
Q ss_pred Eecccc-cHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 196 FHYMEH-DLAGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 196 ~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
|||+.+ ++.+.+.. ....+++..+..++.|++.||+|||+.+++||||||+||+++.++.++|+|||++.........
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~ 158 (262)
T cd05071 79 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 158 (262)
T ss_pred EEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccccc
Confidence 999987 45554433 3346899999999999999999999999999999999999999999999999999876543322
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
......++..|+|||+..+.. ++.++|||||||++|+|++ |..||.+....+....+......+
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~-~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~-------------- 223 (262)
T cd05071 159 ARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-------------- 223 (262)
T ss_pred cccCCcccceecCHhHhccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCC--------------
Confidence 222344577899999886644 8999999999999999999 889998877666555443211000
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
....+++.+.+||.+||+.||.+|||+.++++
T Consensus 224 --------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 224 --------------CPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred --------------CccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 01256788999999999999999999999875
No 295
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=2.3e-41 Score=312.58 Aligned_cols=249 Identities=22% Similarity=0.344 Sum_probs=204.3
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
..+|++.+.||.|+||.||+|.+.. +..+|+|.+.... ......+.+|+.+++.++|+||+++++++... ...++
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~l 79 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD--LLKQQDFQKEVQALKRLRHKHLISLFAVCSVG--EPVYI 79 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc--hhhHHHHHHHHHHHhcCCCcchhheeeeEecC--CCeEE
Confidence 3679999999999999999999766 8899999987543 22345678899999999999999999988764 45899
Q ss_pred EEecccc-cHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC
Q 015455 195 VFHYMEH-DLAGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK 272 (406)
Q Consensus 195 v~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~ 272 (406)
+|||+++ ++.+.+.. ....+++..++.++.||+.||.|||+.|++|+||||+||++++++.+||+|||++........
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~ 159 (261)
T cd05148 80 ITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY 159 (261)
T ss_pred EEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence 9999987 55555443 345689999999999999999999999999999999999999999999999999987643322
Q ss_pred CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCc
Q 015455 273 HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351 (406)
Q Consensus 273 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 351 (406)
. .....++..|+|||.+.+. .++.++||||||+++|+|++ |+.||.+.+..+.+..+......+
T Consensus 160 ~-~~~~~~~~~~~~PE~~~~~-~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~------------- 224 (261)
T cd05148 160 L-SSDKKIPYKWTAPEAASHG-TFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMP------------- 224 (261)
T ss_pred c-ccCCCCceEecCHHHHccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCC-------------
Confidence 1 2234457789999988764 48899999999999999998 899998887766666654321111
Q ss_pred ccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 352 TLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.....++.+.++|.+||+.||.+|||+.++++
T Consensus 225 ---------------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 225 ---------------CPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred ---------------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 01356788999999999999999999999875
No 296
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=6e-41 Score=313.21 Aligned_cols=250 Identities=21% Similarity=0.298 Sum_probs=200.1
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCc----EEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCce
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGK----IVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS 191 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~ 191 (406)
++|++.+.||+|+||+||+|++..+|. .||+|.+.... .......+.+|+.++..++||||+++++++... .
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~---~ 82 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT-SPKANKEILDEAYVMAGVGSPYVCRLLGICLTS---T 82 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC-CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC---C
Confidence 689999999999999999999777776 48999886543 344456788899999999999999999988753 3
Q ss_pred EEEEEecccc-cHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 192 LYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 192 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
.+++++|+++ ++.+.+......+++..+..++.||+.||.|||+.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~ 162 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDID 162 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccc
Confidence 6789999986 555555555567999999999999999999999999999999999999999999999999999876533
Q ss_pred CCCC-CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCC
Q 015455 271 HKHP-MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348 (406)
Q Consensus 271 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 348 (406)
.... .....+++.|+|||.+.+.. ++.++|||||||++|||++ |..||...........+... ..++
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~--------- 231 (279)
T cd05109 163 ETEYHADGGKVPIKWMALESILHRR-FTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKG-ERLP--------- 231 (279)
T ss_pred cceeecCCCccchhhCCHHHhccCC-CCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-CcCC---------
Confidence 2211 12223467899999987654 8999999999999999998 89999876655444333221 1110
Q ss_pred CCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 349 PNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.....++++.++|.+||+.||++|||+.+++.
T Consensus 232 ------------------~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 232 ------------------QPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred ------------------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 01246778999999999999999999999984
No 297
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=3.6e-41 Score=314.47 Aligned_cols=252 Identities=23% Similarity=0.347 Sum_probs=199.3
Q ss_pred CCcceeeeeccCCceEEEEEEEcc-----CCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCc
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDML-----TGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~ 190 (406)
++|++.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.++|+||+++++++.+. .
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~ 82 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC-SEQDESDFLMEALIMSKFNHQNIVRLIGVSFER--L 82 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC--C
Confidence 679999999999999999999876 67889999876443 233445678899999999999999999988764 3
Q ss_pred eEEEEEeccccc-HHHHhcCCC------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCC---cEEEee
Q 015455 191 SLYLVFHYMEHD-LAGLAASPE------VKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDG---VLKIAD 260 (406)
Q Consensus 191 ~~~lv~e~~~~~-l~~~~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~---~~kl~D 260 (406)
..+++|||+.++ +...+.... ..+++..+..++.||+.||+|||+.+++||||||+|||++.++ .+||+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEecc
Confidence 478999999764 444443221 2589999999999999999999999999999999999998655 599999
Q ss_pred eccccccCCCCCC-CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCC
Q 015455 261 FGLASFFDPNHKH-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSP 338 (406)
Q Consensus 261 Fgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~ 338 (406)
||+++........ .......+..|+|||++.+.. ++.++|||||||++|+|++ |+.||.+.+..+....+..... +
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~-~ 240 (277)
T cd05036 163 FGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGI-FTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGR-L 240 (277)
T ss_pred CccccccCCccceecCCCCCccHhhCCHHHHhcCC-cCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc-C
Confidence 9999876322111 111223356899999987654 8999999999999999997 9999998777665544332100 0
Q ss_pred CHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 339 SEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
.....+++.+.++|.+||+.||++|||+.++|+|
T Consensus 241 ---------------------------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 241 ---------------------------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred ---------------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0113567889999999999999999999999976
No 298
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=4.8e-41 Score=310.49 Aligned_cols=247 Identities=23% Similarity=0.427 Sum_probs=200.7
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.++||+|+||.||+|.. .+++.||+|.+...... ...+.+|+.++++++|+|++++++++.. ...+++
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~~v 78 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSMS---PEAFLAEANLMKQLQHPRLVRLYAVVTQ---EPIYII 78 (260)
T ss_pred HHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCCc---HHHHHHHHHHHHhcCCcCeeeEEEEEcc---CCcEEE
Confidence 7899999999999999999985 56788999998755433 3457789999999999999999988653 348999
Q ss_pred Eecccc-cHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 196 FHYMEH-DLAGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 196 ~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
|||+.+ ++.+.+.. ....+++.++..++.|++.||+|||+.|++||||||+||+++.++.++|+|||++.........
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05067 79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT 158 (260)
T ss_pred EEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcc
Confidence 999976 45554433 3457899999999999999999999999999999999999999999999999999876533222
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
......++..|+|||++.+.. ++.++||||||+++|+|++ |+.||.+.+..+....+......+
T Consensus 159 ~~~~~~~~~~y~~pe~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-------------- 223 (260)
T cd05067 159 AREGAKFPIKWTAPEAINYGT-FTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMP-------------- 223 (260)
T ss_pred cccCCcccccccCHHHhccCC-cCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCC--------------
Confidence 223344577899999887644 8899999999999999999 999999887766655543321111
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.....+.++.++|.+||+.||++|||++++++
T Consensus 224 --------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 224 --------------RPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred --------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 01246778999999999999999999999875
No 299
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-43 Score=336.63 Aligned_cols=252 Identities=28% Similarity=0.454 Sum_probs=203.0
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEecccc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH 201 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~ 201 (406)
-+||+|.||+||.|++..+...+|||.+.... .....-+..|+...++|+|+|||+++|.+.. ++++-+.||-++|
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekd--sr~~QPLhEEIaLH~~LrHkNIVrYLGs~se--nGf~kIFMEqVPG 656 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKD--SREVQPLHEEIALHSTLRHKNIVRYLGSVSE--NGFFKIFMEQVPG 656 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeeccccc--chhhccHHHHHHHHHHHhhHhHHHHhhccCC--CCeEEEEeecCCC
Confidence 37999999999999999999999999986432 2334557779999999999999999999776 5578899999998
Q ss_pred cHHH-HhcCCCCCC--CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEc-CCCcEEEeeeccccccCCCCCCCCcC
Q 015455 202 DLAG-LAASPEVKF--TEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTS 277 (406)
Q Consensus 202 ~l~~-~~~~~~~~~--~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~-~~~~~kl~DFgla~~~~~~~~~~~~~ 277 (406)
|.+. ++...=+++ ++..+-.+.+||++||.|||++.|||||||-+|+||+ -.|.+||+|||.++.+..-+ ..+.+
T Consensus 657 GSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin-P~TET 735 (1226)
T KOG4279|consen 657 GSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN-PCTET 735 (1226)
T ss_pred CcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCC-ccccc
Confidence 6555 444555677 8999999999999999999999999999999999996 67899999999999875332 23456
Q ss_pred ccccCccccccccc-CCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCC
Q 015455 278 RVVTLWYRPPELLL-GATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKP 356 (406)
Q Consensus 278 ~~gt~~y~aPE~~~-~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (406)
+.||..|||||++. |...|+.++|||||||++.||.||++||......+. .|++. +-+ ..+|
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA--AMFkV-----------Gmy----KvHP 798 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA--AMFKV-----------GMY----KVHP 798 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH--hhhhh-----------cce----ecCC
Confidence 78999999999996 445699999999999999999999999975543322 11111 000 0000
Q ss_pred CCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 357 REPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
..+..++.+++.||.+|+.+||.+||+|.++|..||++.
T Consensus 799 ---------~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~ 837 (1226)
T KOG4279|consen 799 ---------PIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQH 837 (1226)
T ss_pred ---------CCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCccccc
Confidence 011246677899999999999999999999999999974
No 300
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=5.1e-41 Score=315.79 Aligned_cols=252 Identities=25% Similarity=0.384 Sum_probs=201.2
Q ss_pred CCcceeeeeccCCceEEEEEEEccC-----CcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCC
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLT-----GKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMS 189 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~ 189 (406)
++|++.+.||+|+||.||++..... ...+|+|.+..... ......+.+|++++..+ +|+||+++++++...
T Consensus 12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~-- 88 (293)
T cd05053 12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE-- 88 (293)
T ss_pred hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC-HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC--
Confidence 6899999999999999999987543 36899999875433 33445688899999999 899999999998764
Q ss_pred ceEEEEEecccccHHH-Hhc---------------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCC
Q 015455 190 CSLYLVFHYMEHDLAG-LAA---------------SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDD 253 (406)
Q Consensus 190 ~~~~lv~e~~~~~l~~-~~~---------------~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~ 253 (406)
..++++|||+.++.+. .+. .....+++..++.++.|++.||+|||+.||+||||||+|||++.+
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~ 168 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTED 168 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCC
Confidence 4589999999875444 332 234578999999999999999999999999999999999999999
Q ss_pred CcEEEeeeccccccCCCCCC-CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 015455 254 GVLKIADFGLASFFDPNHKH-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKI 331 (406)
Q Consensus 254 ~~~kl~DFgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i 331 (406)
+.+||+|||+++........ ......++..|+|||++.+.. ++.++|||||||++|+|++ |..||.+.+..+....+
T Consensus 169 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~ 247 (293)
T cd05053 169 HVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLL 247 (293)
T ss_pred CeEEeCccccccccccccceeccCCCCCCccccCHHHhccCC-cCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHH
Confidence 99999999999876433211 112223467899999886644 8899999999999999997 99999988776665554
Q ss_pred HHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 332 YKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
...... ......++.+.+|+.+||..||.+|||+.+++++
T Consensus 248 ~~~~~~----------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 248 KEGYRM----------------------------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HcCCcC----------------------------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 331100 0012457789999999999999999999999875
No 301
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=3.7e-41 Score=318.61 Aligned_cols=250 Identities=26% Similarity=0.355 Sum_probs=196.9
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcE--EEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCceE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKI--VALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~--vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~~~ 192 (406)
++|++.+.||+|+||.||+|++..++.. +|+|.+... ........+.+|++++.++ +||||+++++++... ...
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~--~~~ 83 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR--GYL 83 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc-CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCC--CCc
Confidence 7899999999999999999998777764 577766432 2344556788899999999 899999999998764 459
Q ss_pred EEEEeccccc-HHHHhcCC---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcE
Q 015455 193 YLVFHYMEHD-LAGLAASP---------------EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVL 256 (406)
Q Consensus 193 ~lv~e~~~~~-l~~~~~~~---------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~ 256 (406)
|++|||+.++ +...+... ...+++..++.++.||+.||+|||+.|++||||||+|||++.++.+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA 163 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcE
Confidence 9999999864 44444221 2368999999999999999999999999999999999999999999
Q ss_pred EEeeeccccccCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHh
Q 015455 257 KIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLC 335 (406)
Q Consensus 257 kl~DFgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~ 335 (406)
||+|||++........ .....++..|+|||++.+.. ++.++|||||||++|+|++ |..||.+.+..+....+....
T Consensus 164 kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~ 240 (303)
T cd05088 164 KIADFGLSRGQEVYVK--KTMGRLPVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY 240 (303)
T ss_pred EeCccccCcccchhhh--cccCCCcccccCHHHHhccC-CcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC
Confidence 9999999864321111 11223467799999886644 8899999999999999998 999998877665544432110
Q ss_pred CCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 336 GSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
. + .....+++++.+||.+||+.||.+|||+.++|++
T Consensus 241 ~-~---------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 241 R-L---------------------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred c-C---------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0 0 0012467789999999999999999999999875
No 302
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=8.9e-41 Score=312.70 Aligned_cols=266 Identities=21% Similarity=0.278 Sum_probs=197.2
Q ss_pred CCc-ceeeeeccCCceEEEEEE----EccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCc
Q 015455 116 DSF-EKIDKIGQGTYSNVYKAK----DMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 116 ~~y-~~~~~lg~G~~g~Vy~~~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~ 190 (406)
++| ++.+.||+|+||+||++. ...++..||+|.+.... .......+.+|+++++.++||||+++++++......
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGK 81 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCc
Confidence 345 899999999999998864 34578899999987543 233455677899999999999999999988766566
Q ss_pred eEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 191 SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
.++++|||+.++.+..+... ..+++.+++.++.|++.||.|||+.||+||||||+|||++.++.++|+|||++......
T Consensus 82 ~~~lv~e~~~~~~l~~~~~~-~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 160 (283)
T cd05080 82 GLQLIMEYVPLGSLRDYLPK-HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 160 (283)
T ss_pred eEEEEecCCCCCCHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCc
Confidence 78999999998655544333 35999999999999999999999999999999999999999999999999999876433
Q ss_pred CCCC--CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC-CCCHHHhhhcC
Q 015455 271 HKHP--MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCG-SPSEEYWKKSK 347 (406)
Q Consensus 271 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~ 347 (406)
.... .....++..|+|||.+.+.. ++.++||||||+++|+|++|..||...... +..+..... ......+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~~Di~slG~~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05080 161 HEYYRVREDGDSPVFWYAVECLKENK-FSYASDVWSFGVTLYELLTHCDSKQSPPKK--FEEMIGPKQGQMTVVRLIELL 237 (283)
T ss_pred chhhccCCCCCCCceeeCHhHhcccC-CCcccccHHHHHHHHHHHhCCCCCCCCcch--hhhhhcccccccchhhhhhhh
Confidence 2211 12234566799999887644 889999999999999999999998654321 111111000 00000000000
Q ss_pred CCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 348 LPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
... . .......++..+.+++..||+.||++|||+.++++
T Consensus 238 ~~~-----~-------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 238 ERG-----M-------RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred hcC-----C-------CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 000 0 00012356788999999999999999999999985
No 303
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=5.2e-41 Score=316.66 Aligned_cols=250 Identities=24% Similarity=0.309 Sum_probs=197.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCc--EEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCceE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGK--IVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~~~ 192 (406)
++|++.+.||+|+||.||+|....++. .+++|.++.. ........+.+|+.++.++ +||||+++++++... ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~--~~~ 78 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF-ASENDHRDFAGELEVLCKLGHHPNIINLLGACENR--GYL 78 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc-CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccC--Ccc
Confidence 679999999999999999998877765 4688877532 2334456678899999999 799999999988764 458
Q ss_pred EEEEeccccc-HHHHhcCC---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcE
Q 015455 193 YLVFHYMEHD-LAGLAASP---------------EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVL 256 (406)
Q Consensus 193 ~lv~e~~~~~-l~~~~~~~---------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~ 256 (406)
|++|||++++ +.+.+... ...+++..++.++.||+.||+|||+.||+||||||+|||++.++.+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 79 YIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred eEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeE
Confidence 9999999864 44444321 1358899999999999999999999999999999999999999999
Q ss_pred EEeeeccccccCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHh
Q 015455 257 KIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLC 335 (406)
Q Consensus 257 kl~DFgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~ 335 (406)
||+|||++........ ......+..|+|||++.+.. ++.++|||||||++|||++ |..||.+.+..+....+....
T Consensus 159 kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~-~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~ 235 (297)
T cd05089 159 KIADFGLSRGEEVYVK--KTMGRLPVRWMAIESLNYSV-YTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY 235 (297)
T ss_pred EECCcCCCccccceec--cCCCCcCccccCchhhccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC
Confidence 9999999864322111 11122356799999887644 8999999999999999997 999999887766655543211
Q ss_pred CCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 336 GSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
.. .....+++.+.+||.+||+.||.+|||++++++.
T Consensus 236 ~~----------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 236 RM----------------------------EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred CC----------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00 0112577889999999999999999999999764
No 304
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=5.9e-41 Score=347.66 Aligned_cols=149 Identities=26% Similarity=0.415 Sum_probs=130.4
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~ 193 (406)
.++|.+++.||+|+||.||+|++..+++.||||+++.... .......+.+|+.++..++||||+++++++.. ...+|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~--~~~~~ 80 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQS--ANNVY 80 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE--CCEEE
Confidence 3789999999999999999999988999999999976433 34445678889999999999999999988876 45699
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeecccc
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS 265 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~ 265 (406)
+||||+.++.+..+......+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++
T Consensus 81 lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 81 LVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999875554444444578999999999999999999999999999999999999999999999999985
No 305
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=9.6e-41 Score=307.63 Aligned_cols=246 Identities=28% Similarity=0.427 Sum_probs=202.7
Q ss_pred eeeccCCceEEEEEEEccC---CcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEec
Q 015455 122 DKIGQGTYSNVYKAKDMLT---GKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHY 198 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~ 198 (406)
+.||+|+||.||+|.+... +..||+|.+....... ....+.+|+.++..++|+|++++++++.. ....+++|||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv~e~ 77 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTE--EEPLYLVLEY 77 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecC--CCceEEEEEe
Confidence 4689999999999998765 8899999987654333 46778899999999999999999998887 4569999999
Q ss_pred ccc-cHHHHhcCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCC
Q 015455 199 MEH-DLAGLAASP--------EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDP 269 (406)
Q Consensus 199 ~~~-~l~~~~~~~--------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~ 269 (406)
+.+ ++...+... ...+++..++.++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred ccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 965 555554443 47899999999999999999999999999999999999999999999999999987754
Q ss_pred CCC-CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcC
Q 015455 270 NHK-HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347 (406)
Q Consensus 270 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 347 (406)
... .......+++.|+|||.+.+. .++.++||||||+++|+|++ |..||......+....+......
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---------- 226 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDG-IFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRL---------- 226 (262)
T ss_pred ccccccccCCCcCccccCHHHhccC-CcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC----------
Confidence 321 112344568899999988765 48999999999999999999 69999988776666655431100
Q ss_pred CCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 348 LPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
.....+++++.++|.+||..||.+|||+.+++++
T Consensus 227 ------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 227 ------------------PKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred ------------------CCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 1113568899999999999999999999999875
No 306
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-42 Score=330.63 Aligned_cols=246 Identities=26% Similarity=0.381 Sum_probs=203.8
Q ss_pred ccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCceE
Q 015455 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 114 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~~~ 192 (406)
..+.|.+...+|.|+|+.|-.+.+..+++.+++|++..... ...+|+.++... +||||+++++.+.+ ....
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~------~~~~e~~~~~~~~~h~niv~~~~v~~~--~~~~ 391 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD------DNQDEIPISLLVRDHPNIVKSHDVYED--GKEI 391 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccccc------ccccccchhhhhcCCCcceeecceecC--Ccee
Confidence 45789999999999999999999999999999999976521 123467666655 79999999999988 4569
Q ss_pred EEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEE-cCCCcEEEeeeccccccCCCC
Q 015455 193 YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLI-DDDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 193 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll-~~~~~~kl~DFgla~~~~~~~ 271 (406)
|+|||.+.++.+.........+. .++..|++||+.|+.|||++|+|||||||+|||+ +..++++|+|||.++.....
T Consensus 392 ~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~- 469 (612)
T KOG0603|consen 392 YLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS- 469 (612)
T ss_pred eeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence 99999999976655544443444 7888999999999999999999999999999999 69999999999999987544
Q ss_pred CCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCc
Q 015455 272 KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351 (406)
Q Consensus 272 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 351 (406)
....+-|..|.|||++.. ..|++++||||||++||+|++|+.||...... ..|+..++.+...
T Consensus 470 ---~~tp~~t~~y~APEvl~~-~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---~ei~~~i~~~~~s---------- 532 (612)
T KOG0603|consen 470 ---CDTPALTLQYVAPEVLAI-QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---IEIHTRIQMPKFS---------- 532 (612)
T ss_pred ---hcccchhhcccChhhhcc-CCCCcchhhHHHHHHHHHHHhCCCccccCCch---HHHHHhhcCCccc----------
Confidence 344567999999999885 45999999999999999999999999876665 2222322222210
Q ss_pred ccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccc
Q 015455 352 TLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSY 403 (406)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~ 403 (406)
..+|+.+++||++||+.||.+||++.+++.||||.
T Consensus 533 -----------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~ 567 (612)
T KOG0603|consen 533 -----------------ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFL 567 (612)
T ss_pred -----------------cccCHHHHHHHHHhccCChhhCcChhhhccCcchh
Confidence 26899999999999999999999999999999993
No 307
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=5.1e-41 Score=311.31 Aligned_cols=252 Identities=32% Similarity=0.479 Sum_probs=201.3
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
++|++.+.||+|+||.||+|++..+++.||||.+..... .......+.+|+.+++.++|+||+++++++... ...++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~~ 79 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED--NELNI 79 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeC--CeEEE
Confidence 579999999999999999999989999999998865432 344456788899999999999999999998874 46899
Q ss_pred EEeccccc-HHHHhc---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 195 VFHYMEHD-LAGLAA---SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 195 v~e~~~~~-l~~~~~---~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
+|||+.++ +...+. .....+++..++.++.||+.||.|||+.|++|+||||+||+++.++.++|+|||++......
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd08229 80 VLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred EEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccC
Confidence 99999875 444332 23457899999999999999999999999999999999999999999999999998876433
Q ss_pred CCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCCHHHhhhcCC
Q 015455 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEV--EQLHKIYKLCGSPSEEYWKKSKL 348 (406)
Q Consensus 271 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~ 348 (406)
.. ......++..|+|||++.+.. ++.++|+||||+++|+|++|..||.+.... .....+.... .++
T Consensus 160 ~~-~~~~~~~~~~~~ape~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~--------- 227 (267)
T cd08229 160 TT-AAHSLVGTPYYMSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD-YPP--------- 227 (267)
T ss_pred Cc-ccccccCCcCccCHHHhcCCC-ccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCC-CCC---------
Confidence 22 123456889999999987654 888999999999999999999999765432 2222221110 000
Q ss_pred CCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 349 PNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.....+++.+.++|.+||+.||.+|||+.++++
T Consensus 228 -----------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 228 -----------------LPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred -----------------CCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 001246778999999999999999999997764
No 308
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-43 Score=363.01 Aligned_cols=259 Identities=28% Similarity=0.462 Sum_probs=219.7
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
-+++....||.|.||.||-|.+..+|...|+|-++...........+.+|..++..++|||+|+++|+-.++.. ++|.
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRek--v~IF 1312 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREK--VYIF 1312 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHH--HHHH
Confidence 45777889999999999999999999999999998776666667778899999999999999999999887654 8999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC--
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH-- 273 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~-- 273 (406)
||||.++.+..+...+...++...+.+..|++.|++|||++|||||||||+|||++.+|.+|++|||.|..+..+...
T Consensus 1313 MEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~ 1392 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMP 1392 (1509)
T ss_pred HHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCC
Confidence 999999998888888878899999999999999999999999999999999999999999999999999988654211
Q ss_pred -CCcCccccCcccccccccCCc--cCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 274 -PMTSRVVTLWYRPPELLLGAT--DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 274 -~~~~~~gt~~y~aPE~~~~~~--~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
.....+||+.|||||++.+.. ..+.+.||||+||++.||+||+.||...++.-++.--+.....|.
T Consensus 1393 ~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq----------- 1461 (1509)
T KOG4645|consen 1393 GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQ----------- 1461 (1509)
T ss_pred HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCC-----------
Confidence 234568999999999997643 356799999999999999999999987665544333322221111
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSY 403 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~ 403 (406)
.+..++++..+||..||..||++|.++.|+|+|.|=+
T Consensus 1462 ----------------~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1462 ----------------IPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGK 1498 (1509)
T ss_pred ----------------CchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccc
Confidence 1124889999999999999999999999999998854
No 309
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2e-40 Score=307.12 Aligned_cols=252 Identities=32% Similarity=0.495 Sum_probs=201.8
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
++|++.+.||+|+||.||+|.+..+|+.||+|.++.... .......+.+|++++++++|+|++++++++... ...++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~--~~~~l 79 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIEN--NELNI 79 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecC--CeEEE
Confidence 579999999999999999999988999999999875332 334466788999999999999999999998874 56899
Q ss_pred EEeccccc-HHHHhc---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 195 VFHYMEHD-LAGLAA---SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 195 v~e~~~~~-l~~~~~---~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
+|||++++ +...+. ..+..+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 159 (267)
T cd08224 80 VLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred EEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCC
Confidence 99999874 444432 33456899999999999999999999999999999999999999999999999999876433
Q ss_pred CCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCCHHHhhhcCC
Q 015455 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEV--EQLHKIYKLCGSPSEEYWKKSKL 348 (406)
Q Consensus 271 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~ 348 (406)
.. ......+++.|+|||.+.+.. ++.++|+|||||++|+|++|+.||...... +....+.... .
T Consensus 160 ~~-~~~~~~~~~~y~apE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------------~ 225 (267)
T cd08224 160 TT-AAHSLVGTPYYMSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCD------------Y 225 (267)
T ss_pred Cc-ccceecCCccccCHHHhccCC-CCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCC------------C
Confidence 22 123456789999999887654 889999999999999999999999654321 2222221110 0
Q ss_pred CCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 349 PNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
+. .....++..+.++|.+||..+|++|||+.++++
T Consensus 226 ~~---------------~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 226 PP---------------LPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred CC---------------CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 00 000246678999999999999999999999875
No 310
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-42 Score=329.96 Aligned_cols=241 Identities=25% Similarity=0.379 Sum_probs=201.1
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
+...-++-||+|+.|.||+|+ -.++.||||+++. .-..++.-|++|+||||+.+.|+|.. ...++|+
T Consensus 124 e~IsELeWlGSGaQGAVF~Gr--l~netVAVKKV~e---------lkETdIKHLRkLkH~NII~FkGVCtq--sPcyCIi 190 (904)
T KOG4721|consen 124 EEISELEWLGSGAQGAVFLGR--LHNETVAVKKVRE---------LKETDIKHLRKLKHPNIITFKGVCTQ--SPCYCII 190 (904)
T ss_pred HHhhhhhhhccCcccceeeee--ccCceehhHHHhh---------hhhhhHHHHHhccCcceeeEeeeecC--CceeEEe
Confidence 445556789999999999997 5678899998752 12247889999999999999999998 4568999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
||||..+-+...+..+..++......|..+||.||.|||.++|||||||.-||||+.+..|||+|||.++..... ...
T Consensus 191 MEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STk 268 (904)
T KOG4721|consen 191 MEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--STK 268 (904)
T ss_pred eeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh--hhh
Confidence 999998877777777778999999999999999999999999999999999999999999999999999987543 335
Q ss_pred cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCC
Q 015455 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFK 355 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 355 (406)
.+++||..|||||++.+. +.+.|+|||||||+||||+||..||.+.+...++--+ |.... .+
T Consensus 269 MSFaGTVaWMAPEvIrne-PcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGV----GsNsL------~L------- 330 (904)
T KOG4721|consen 269 MSFAGTVAWMAPEVIRNE-PCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGV----GSNSL------HL------- 330 (904)
T ss_pred hhhhhhHhhhCHHHhhcC-CcccccceehhHHHHHHHHhcCCCccccchheeEEec----cCCcc------cc-------
Confidence 778999999999999875 4999999999999999999999999877654332211 11100 00
Q ss_pred CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 356 PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
..+..+|+.++=||+.||+..|..||++.++|.|
T Consensus 331 ----------pvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~H 364 (904)
T KOG4721|consen 331 ----------PVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLH 364 (904)
T ss_pred ----------cCcccCchHHHHHHHHHHhcCCCCCccHHHHHHH
Confidence 1113678889999999999999999999999987
No 311
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.2e-40 Score=307.23 Aligned_cols=244 Identities=20% Similarity=0.282 Sum_probs=194.3
Q ss_pred eeeccCCceEEEEEEEccCC---cEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEec
Q 015455 122 DKIGQGTYSNVYKAKDMLTG---KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHY 198 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~---~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~ 198 (406)
++||+|+||.||+|....++ ..||+|.+...... ...+.+.+|+.+++.++|+||+++++++.. ...+++|||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~v~e~ 76 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCKG---EPLMLVMEL 76 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEcC---CceEEEEEe
Confidence 46999999999999765544 78999998765543 445678889999999999999999998754 347999999
Q ss_pred ccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcC-
Q 015455 199 MEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTS- 277 (406)
Q Consensus 199 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~- 277 (406)
+.++.+.........+++..+..++.|++.||+|||+.+++|+||||+|||++.++.+||+|||+++............
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~ 156 (257)
T cd05060 77 APLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATT 156 (257)
T ss_pred CCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCccccccc
Confidence 9875444344444479999999999999999999999999999999999999999999999999998775433221111
Q ss_pred -ccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCC
Q 015455 278 -RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFK 355 (406)
Q Consensus 278 -~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 355 (406)
..++..|+|||.+.+.. ++.++|||||||++|+|++ |.+||...+..+....+..... .
T Consensus 157 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~----------------- 217 (257)
T cd05060 157 AGRWPLKWYAPECINYGK-FSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGER-L----------------- 217 (257)
T ss_pred CccccccccCHHHhcCCC-CCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCc-C-----------------
Confidence 12346799999887654 8999999999999999998 9999988776655554432110 0
Q ss_pred CCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 356 PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.....+++.+.++|.+||..||.+|||+.++++
T Consensus 218 ----------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 218 ----------PRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred ----------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 011356788999999999999999999999875
No 312
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.3e-40 Score=310.35 Aligned_cols=252 Identities=20% Similarity=0.285 Sum_probs=200.9
Q ss_pred CCcceeeeeccCCceEEEEEEEccC-----CcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCc
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLT-----GKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~ 190 (406)
++|++.+.||+|+||.||+|.+... +..||+|.+.... .......+.+|+.++..++||||+++++++... .
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~ 82 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG--Q 82 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC--C
Confidence 7899999999999999999987543 3789999986443 233345677899999999999999999998874 5
Q ss_pred eEEEEEeccccc-HHHHhcC---------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEee
Q 015455 191 SLYLVFHYMEHD-LAGLAAS---------PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIAD 260 (406)
Q Consensus 191 ~~~lv~e~~~~~-l~~~~~~---------~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~D 260 (406)
..+++|||+.++ +...+.. ....+++..+..++.||+.||.|||+.+++||||||+|||++.++.+||+|
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECC
Confidence 689999999864 4444322 123478899999999999999999999999999999999999999999999
Q ss_pred eccccccCCCCC-CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCC
Q 015455 261 FGLASFFDPNHK-HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSP 338 (406)
Q Consensus 261 Fgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~ 338 (406)
||+++....... .......++..|+|||.+.+.. ++.++|||||||++|||++ |..||.+.+..+....+... ..+
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~~~ 240 (277)
T cd05032 163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGV-FTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDG-GHL 240 (277)
T ss_pred cccchhhccCcccccCCCCCccccccCHHHHhcCC-CCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcC-CCC
Confidence 999986543321 1123345678899999887644 8899999999999999998 99999887776665544321 000
Q ss_pred CHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 339 SEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
......++.+.++|.+||+.+|.+|||+.++++.
T Consensus 241 ---------------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 274 (277)
T cd05032 241 ---------------------------DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSS 274 (277)
T ss_pred ---------------------------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 0012457789999999999999999999999863
No 313
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.4e-40 Score=307.60 Aligned_cols=247 Identities=26% Similarity=0.387 Sum_probs=198.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++...||+|+||.||+|.+..+ ..+|+|.+..... ..+.+.+|+.+++.++|+|++++++++.. ...+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~~v 78 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVSE---EPIYIV 78 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEcC---CCcEEE
Confidence 5799999999999999999986444 4699998765432 23457789999999999999999988753 347899
Q ss_pred Eecccc-cHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 196 FHYMEH-DLAGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 196 ~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
|||+.+ ++.+.+.. ....+++..+..++.|++.||.|||+.|++|+||||+||++++++.++|+|||++.........
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05069 79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT 158 (260)
T ss_pred EEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCccc
Confidence 999987 56665543 3345899999999999999999999999999999999999999999999999999876443322
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
......++..|+|||.+.+.. ++.++||||||+++|+|++ |..||.+....+....+......
T Consensus 159 ~~~~~~~~~~y~~Pe~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~--------------- 222 (260)
T cd05069 159 ARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRM--------------- 222 (260)
T ss_pred ccCCCccchhhCCHHHhccCC-cChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---------------
Confidence 222334577899999887644 8899999999999999999 99999988776665554331100
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.....++..+.++|.+||++||.+|||++++++
T Consensus 223 -------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 223 -------------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred -------------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 001246778999999999999999999999874
No 314
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=8.2e-41 Score=314.75 Aligned_cols=258 Identities=20% Similarity=0.276 Sum_probs=201.7
Q ss_pred CCcceeeeeccCCceEEEEEEEccCC----------------cEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeee
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTG----------------KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIK 179 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~----------------~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 179 (406)
.+|++.+.||+|+||.||+|.+...+ ..||+|.+.... .......+.+|++++.+++||||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 67999999999999999999876533 468999987553 3345667888999999999999999
Q ss_pred EeeeeeecCCceEEEEEecccccHHH-HhcCCC----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCe
Q 015455 180 LEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPE----------VKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNL 248 (406)
Q Consensus 180 l~~~~~~~~~~~~~lv~e~~~~~l~~-~~~~~~----------~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NI 248 (406)
+++++... ...+++||++.++.+. ++.... ..+++..++.++.|++.||+|||+.|++||||||+||
T Consensus 84 ~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Ni 161 (296)
T cd05051 84 LLGVCTVD--PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNC 161 (296)
T ss_pred EEEEEecC--CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhce
Confidence 99998774 4689999999875444 332221 2689999999999999999999999999999999999
Q ss_pred EEcCCCcEEEeeeccccccCCCCC-CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh--CCCCCCCCChH
Q 015455 249 LIDDDGVLKIADFGLASFFDPNHK-HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA--GKPIMPGRTEV 325 (406)
Q Consensus 249 ll~~~~~~kl~DFgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~--g~~pf~~~~~~ 325 (406)
+++.++.++|+|||++........ .......+++.|+|||++.+.. ++.++|||||||++|+|++ |..||...+..
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGK-FTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ 240 (296)
T ss_pred eecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCC-CCccchhhhhHHHHHHHHhcCCCCCCCCcChH
Confidence 999999999999999986543321 1223445678999999887644 8999999999999999998 77888877766
Q ss_pred HHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 326 EQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 326 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
+.+..+.......... . .......+++++.++|..||+.||.+|||+.++++
T Consensus 241 ~~~~~~~~~~~~~~~~-----------~----------~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 241 QVIENAGHFFRDDGRQ-----------I----------YLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred HHHHHHHhcccccccc-----------c----------cCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 6655554321111000 0 00011246678999999999999999999999954
No 315
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1e-40 Score=309.57 Aligned_cols=251 Identities=24% Similarity=0.391 Sum_probs=202.5
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCc---EEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~ 192 (406)
++|++.+.||+|+||.||+|++..++. .+|+|.++... .......+.+|+.++++++||||+++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~ 80 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS--KPV 80 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC--Ccc
Confidence 579999999999999999998765443 79999886543 334456788899999999999999999998764 468
Q ss_pred EEEEeccccc-HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC
Q 015455 193 YLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 193 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~ 271 (406)
|++|||++++ +...+......+++..+..++.|++.||.|||+.|++||||||+|||++.++.++|+|||++.......
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 160 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence 9999999875 555555555678999999999999999999999999999999999999999999999999998765432
Q ss_pred CCCC--cCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCC
Q 015455 272 KHPM--TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348 (406)
Q Consensus 272 ~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 348 (406)
.... ....++..|+|||++.+.. ++.++|+|||||++|++++ |..||.+....+....+.+....+
T Consensus 161 ~~~~~~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~---------- 229 (267)
T cd05066 161 EAAYTTRGGKIPIRWTAPEAIAYRK-FTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLP---------- 229 (267)
T ss_pred ceeeecCCCccceeecCHhHhccCc-cCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCC----------
Confidence 2111 1123356899999987644 8999999999999999886 999998877666655554321110
Q ss_pred CCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 349 PNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
....+++.+.+++.+||+++|.+|||+.++++
T Consensus 230 ------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 230 ------------------APMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred ------------------CCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 01246788999999999999999999999975
No 316
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.5e-40 Score=310.69 Aligned_cols=250 Identities=21% Similarity=0.303 Sum_probs=197.5
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCc----EEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCce
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGK----IVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS 191 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~ 191 (406)
++|++.+.||+|+||+||+|.+..+++ .+++|.+... ........+..|+.++.+++||||+++++++.. ..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~---~~ 82 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR-SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG---AS 82 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc-cchHHHHHHHHHHHHHhcCCCCCcceEEEEECC---Cc
Confidence 679999999999999999999877776 4777776432 223344567778889999999999999998753 34
Q ss_pred EEEEEecccc-cHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 192 LYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 192 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
.++++||+.+ ++.+.+......+++..+..++.||+.||+|||+.+++||||||+|||+++++.+||+|||+++.....
T Consensus 83 ~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T cd05111 83 LQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPD 162 (279)
T ss_pred cEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence 6789999885 566666555668999999999999999999999999999999999999999999999999999876433
Q ss_pred CCCC-CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCC
Q 015455 271 HKHP-MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348 (406)
Q Consensus 271 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 348 (406)
.... .....++..|+|||++.+.. ++.++|||||||++|||++ |..||.+.........+.+ ...++
T Consensus 163 ~~~~~~~~~~~~~~y~~pE~~~~~~-~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~--------- 231 (279)
T cd05111 163 DKKYFYSEHKTPIKWMALESILFGR-YTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEK-GERLA--------- 231 (279)
T ss_pred CcccccCCCCCcccccCHHHhccCC-cCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-CCcCC---------
Confidence 3221 22345677899999987654 8999999999999999998 9999988765544333321 11000
Q ss_pred CCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 349 PNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.....+.++.+++..|+..||.+|||+.++++
T Consensus 232 ------------------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 232 ------------------QPQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred ------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 00134557889999999999999999999876
No 317
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.5e-40 Score=307.10 Aligned_cols=249 Identities=24% Similarity=0.388 Sum_probs=201.9
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
.++|++.+.||+|+||.||+|.+ .+++.||+|.+...... ...+.+|+.+++.++|+||+++++++... ...++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~-~~~~~~~vK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~~ 78 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTW-NGTTKVAVKTLKPGTMS---PEAFLQEAQIMKKLRHDKLVQLYAVCSEE--EPIYI 78 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEE-cCCceEEEEEecCCccC---HHHHHHHHHHHhhCCCCCEeeeeeeeecC--CceEE
Confidence 37899999999999999999986 45678999998765433 34577899999999999999999988763 45899
Q ss_pred EEeccccc-HHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC
Q 015455 195 VFHYMEHD-LAGLAASP-EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK 272 (406)
Q Consensus 195 v~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~ 272 (406)
+|||++++ +.+.+... ...+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++........
T Consensus 79 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (261)
T cd05034 79 VTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY 158 (261)
T ss_pred EEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhh
Confidence 99999874 55554433 35789999999999999999999999999999999999999999999999999987653221
Q ss_pred CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCc
Q 015455 273 HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351 (406)
Q Consensus 273 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 351 (406)
.......++..|+|||.+.+.. ++.++|+||||+++|+|++ |+.||.+.+....+..+......+.
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~------------ 225 (261)
T cd05034 159 TAREGAKFPIKWTAPEAANYGR-FTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPR------------ 225 (261)
T ss_pred hhhhccCCCccccCHHHhccCC-cCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC------------
Confidence 1112223467899999887644 8899999999999999998 9999998877776666643211110
Q ss_pred ccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 352 TLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
....+..+.+++.+||+.||.+|||++++++
T Consensus 226 ----------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 226 ----------------PPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred ----------------CCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 1245778999999999999999999999874
No 318
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.8e-40 Score=307.99 Aligned_cols=251 Identities=22% Similarity=0.359 Sum_probs=202.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCc---EEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~ 192 (406)
++|+..+.||+|+||.||+|++..++. .+|+|.+.... .......+..|+++++.++|||++++.+++... ...
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~ 81 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKF--KPA 81 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccC--CCc
Confidence 678999999999999999999876654 79999886543 334456788899999999999999999998764 458
Q ss_pred EEEEecccccHHH-HhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC
Q 015455 193 YLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 193 ~lv~e~~~~~l~~-~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~ 271 (406)
|++|||++++.+. .+......+++..+..++.|++.||+|||+.|++|+||||+||+++.++.+||+|||++.......
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 161 (268)
T cd05063 82 MIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDP 161 (268)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccccc
Confidence 9999999975554 444445679999999999999999999999999999999999999999999999999998664332
Q ss_pred CCCCc--CccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCC
Q 015455 272 KHPMT--SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348 (406)
Q Consensus 272 ~~~~~--~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 348 (406)
..... ....++.|+|||++.+.. ++.++|||||||++|||++ |+.||...+..+....+......+.
T Consensus 162 ~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~--------- 231 (268)
T cd05063 162 EGTYTTSGGKIPIRWTAPEAIAYRK-FTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPA--------- 231 (268)
T ss_pred ccceeccCCCcCceecCHHHhhcCC-cChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCC---------
Confidence 21111 122356799999887644 8899999999999999997 9999988777666665543211110
Q ss_pred CCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 349 PNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
....+..+.+++..||+.||.+||++.++++
T Consensus 232 -------------------~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 232 -------------------PMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred -------------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 1246778999999999999999999999985
No 319
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=8.9e-41 Score=326.77 Aligned_cols=252 Identities=19% Similarity=0.266 Sum_probs=196.1
Q ss_pred CCcceeeeeccCCceEEEEEEEccC-----CcEEEEEEEecCCCChHHHHHHHHHHHHHhhCC-CCCeeeEeeeeeecCC
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLT-----GKIVALKKVRFDNLEPESVKFMAREILILRRLD-HPNVIKLEGLVTSRMS 189 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~l~~~~~~~~~ 189 (406)
++|.+.+.||+|+||.||+|.+... +..||||++.... .....+.+.+|++++.++. |||||++++++...
T Consensus 37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~-- 113 (400)
T cd05105 37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS-- 113 (400)
T ss_pred cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC--
Confidence 6899999999999999999986432 3479999986543 3344567888999999996 99999999999763
Q ss_pred ceEEEEEecccccHHH-HhcCC----------------------------------------------------------
Q 015455 190 CSLYLVFHYMEHDLAG-LAASP---------------------------------------------------------- 210 (406)
Q Consensus 190 ~~~~lv~e~~~~~l~~-~~~~~---------------------------------------------------------- 210 (406)
...|+||||++++.+. .+...
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 4599999999875433 22110
Q ss_pred -------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCC
Q 015455 211 -------------------------------------EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDD 253 (406)
Q Consensus 211 -------------------------------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~ 253 (406)
...+++..+..++.||+.||.|||+.+|+||||||+|||++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~ 273 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQG 273 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCC
Confidence 1247888999999999999999999999999999999999999
Q ss_pred CcEEEeeeccccccCCCCCC-CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 015455 254 GVLKIADFGLASFFDPNHKH-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKI 331 (406)
Q Consensus 254 ~~~kl~DFgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i 331 (406)
+.+||+|||+++........ ......+++.|+|||++.+.. ++.++|||||||++|+|++ |..||........+...
T Consensus 274 ~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~ 352 (400)
T cd05105 274 KIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNL-YTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNK 352 (400)
T ss_pred CEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCC-CCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHH
Confidence 99999999999876432221 122345678899999987654 8999999999999999997 99999876544333222
Q ss_pred HHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 332 YKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
......+ .....+++.+.++|.+||+.||++|||+.++.+
T Consensus 353 ~~~~~~~---------------------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 353 IKSGYRM---------------------------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred HhcCCCC---------------------------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 2210000 001256788999999999999999999998865
No 320
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-42 Score=305.61 Aligned_cols=258 Identities=22% Similarity=0.388 Sum_probs=215.0
Q ss_pred ccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCce
Q 015455 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCS 191 (406)
Q Consensus 114 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~~ 191 (406)
..++|.++++||+|+|++|.+++.+.+.+.||+|++++.-. +.+.......|..+..+- +||.+|-++.+|..+ ..
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqte--sr 325 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTE--SR 325 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhccc--ce
Confidence 45899999999999999999999999999999999987654 445566777888888776 799999999999874 55
Q ss_pred EEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC
Q 015455 192 LYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 192 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~ 271 (406)
+++|.||++|+.+.+..++..+++++.++.+..+|..||.|||++|||+||||.+|+|++.+|++||+|+|+++.--..
T Consensus 326 lffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~- 404 (593)
T KOG0695|consen 326 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP- 404 (593)
T ss_pred EEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCC-
Confidence 9999999999988888888889999999999999999999999999999999999999999999999999999864222
Q ss_pred CCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCC--CCC-----hHHH-HHHHHHHhCCCCHHHh
Q 015455 272 KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMP--GRT-----EVEQ-LHKIYKLCGSPSEEYW 343 (406)
Q Consensus 272 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~--~~~-----~~~~-~~~i~~~~~~~~~~~~ 343 (406)
...+++++|||.|+|||++.|.. |+..+|||+|||+++||+.|+.||. |.+ .++. ++-|.+.-.
T Consensus 405 gd~tstfcgtpnyiapeilrgee-ygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi------- 476 (593)
T KOG0695|consen 405 GDTTSTFCGTPNYIAPEILRGEE-YGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI------- 476 (593)
T ss_pred CcccccccCCCcccchhhhcccc-cCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc-------
Confidence 22357789999999999988754 9999999999999999999999995 221 1222 233332110
Q ss_pred hhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcC------HHHHhcCccccc
Q 015455 344 KKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT------ATVALNSEVSYQ 404 (406)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------a~elL~h~~f~~ 404 (406)
..++.++-.+..+++..|++||.+|.. ..++-.|+||+.
T Consensus 477 ----------------------riprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~ 521 (593)
T KOG0695|consen 477 ----------------------RIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRS 521 (593)
T ss_pred ----------------------cccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhh
Confidence 111245666788999999999999974 789999999984
No 321
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.2e-40 Score=313.29 Aligned_cols=250 Identities=22% Similarity=0.313 Sum_probs=198.7
Q ss_pred CCcceeeeeccCCceEEEEEEEc-----cCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCc
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDM-----LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~ 190 (406)
.+|.+.+.||+|+||.||+|++. .++..+++|.+.... ......+.+|++++++++|+||+++++++... .
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~ 80 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT--LAARKDFQREAELLTNLQHEHIVKFYGVCGDG--D 80 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc--HHHHHHHHHHHHHHhcCCCCCcceEEEEEccC--C
Confidence 56999999999999999999753 345578999875432 33345678899999999999999999998763 4
Q ss_pred eEEEEEecccccHH-HHhcC---------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCC
Q 015455 191 SLYLVFHYMEHDLA-GLAAS---------------PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDG 254 (406)
Q Consensus 191 ~~~lv~e~~~~~l~-~~~~~---------------~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~ 254 (406)
..++||||+.++.+ +.+.. ....+++..++.++.||+.||+|||++|++||||||+|||++.++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANL 160 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC
Confidence 58999999986544 44322 124589999999999999999999999999999999999999999
Q ss_pred cEEEeeeccccccCCCCC-CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 015455 255 VLKIADFGLASFFDPNHK-HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIY 332 (406)
Q Consensus 255 ~~kl~DFgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~ 332 (406)
.++|+|||++........ .......++..|+|||++.+.. ++.++|||||||++|+|++ |..||...+..+....+.
T Consensus 161 ~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~ 239 (291)
T cd05094 161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRK-FTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECIT 239 (291)
T ss_pred cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh
Confidence 999999999976543321 1123345688899999887654 8899999999999999998 999998877666555442
Q ss_pred HHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 333 KLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.... ......+|..+.+++.+||+.||.+|||+.++++
T Consensus 240 ~~~~----------------------------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 240 QGRV----------------------------LERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred CCCC----------------------------CCCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 2100 0011246778999999999999999999999875
No 322
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.4e-40 Score=312.18 Aligned_cols=262 Identities=25% Similarity=0.391 Sum_probs=203.2
Q ss_pred CcceeeeeccCCceEEEEEEEc---cCCcEEEEEEEecCCC--ChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCc
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDM---LTGKIVALKKVRFDNL--EPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~ 190 (406)
+|++.+.||+|+||.||++++. .+++.||+|.+..... .......+.+|+.++.++ +||||+++++.+.. ..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~--~~ 78 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQT--DT 78 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeec--CC
Confidence 4788999999999999999854 4678999999875432 223345677899999999 69999999988876 45
Q ss_pred eEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 191 SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
..++||||+.++.+.........+++..++.++.|++.||.|||+.+++|+||+|.||+++.++.++|+|||++..+...
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 79 KLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence 68999999987655544444457899999999999999999999999999999999999999999999999999876544
Q ss_pred CCCCCcCccccCcccccccccCCc-cCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCC
Q 015455 271 HKHPMTSRVVTLWYRPPELLLGAT-DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLP 349 (406)
Q Consensus 271 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 349 (406)
.........++..|+|||.+.+.. ..+.++|+||||+++|+|++|..||...........+.+.....
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~----------- 227 (288)
T cd05583 159 EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS----------- 227 (288)
T ss_pred cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc-----------
Confidence 332233456899999999876532 36789999999999999999999996543222222221110000
Q ss_pred CcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcC---HHHHhcCcccccc
Q 015455 350 NATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT---ATVALNSEVSYQF 405 (406)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---a~elL~h~~f~~~ 405 (406)
.......+++.+.++|.+||+.||++||| +.++|+||||+.+
T Consensus 228 --------------~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~ 272 (288)
T cd05583 228 --------------KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGI 272 (288)
T ss_pred --------------CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence 00011246788999999999999999998 5778999999864
No 323
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.3e-40 Score=311.34 Aligned_cols=250 Identities=22% Similarity=0.328 Sum_probs=199.1
Q ss_pred CCcceeeeeccCCceEEEEEEEc-----cCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCc
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDM-----LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~ 190 (406)
.+|.+..+||+|+||.||++... .++..+|+|.+... .......+.+|+++++.++|+||+++++++... .
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~ 80 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTVLQHQHIVRFYGVCTEG--R 80 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC--CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecC--C
Confidence 57889999999999999999642 34668999987643 344556788999999999999999999988774 4
Q ss_pred eEEEEEecccccHH-HHhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCc
Q 015455 191 SLYLVFHYMEHDLA-GLAASPE--------------VKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGV 255 (406)
Q Consensus 191 ~~~lv~e~~~~~l~-~~~~~~~--------------~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~ 255 (406)
..+++|||+.++.+ .++.... ..+++..++.++.||+.||+|||+.|++||||||+|||+++++.
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~ 160 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLV 160 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCC
Confidence 58999999987544 4333211 35899999999999999999999999999999999999999999
Q ss_pred EEEeeeccccccCCCCCC-CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 015455 256 LKIADFGLASFFDPNHKH-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYK 333 (406)
Q Consensus 256 ~kl~DFgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~ 333 (406)
++|+|||++......... ......+++.|+|||.+.+.. ++.++|||||||++|+|++ |.+||......+....+..
T Consensus 161 ~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~ 239 (280)
T cd05092 161 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRK-FTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQ 239 (280)
T ss_pred EEECCCCceeEcCCCceeecCCCccccccccCHHHhccCC-cCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHc
Confidence 999999999765432211 112234578899999887654 8999999999999999998 9999988777666555533
Q ss_pred HhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 334 LCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.... .....+++.+.+||.+||+.||.+|||+.++++
T Consensus 240 ~~~~----------------------------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 240 GREL----------------------------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred CccC----------------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 2100 011256788999999999999999999999975
No 324
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.1e-40 Score=310.27 Aligned_cols=268 Identities=22% Similarity=0.333 Sum_probs=197.8
Q ss_pred CCcceeeeeccCCceEEEEEE----EccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCce
Q 015455 116 DSFEKIDKIGQGTYSNVYKAK----DMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS 191 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~ 191 (406)
.+|++++.||+|+||.||+|. +..++..||+|.+.... ......+.+|+++++.++||||+++++++.......
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST--AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 81 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence 579999999999999999997 34578899999986442 344567888999999999999999999876655567
Q ss_pred EEEEEecccc-cHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 192 LYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 192 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
++++|||+++ ++...+......+++..++.++.|++.||+|||+.|++||||||+||+++.++.++|+|||++......
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 161 (284)
T cd05081 82 LRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQD 161 (284)
T ss_pred eEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCC
Confidence 8999999986 455555554557899999999999999999999999999999999999999999999999999876433
Q ss_pred CCCCC--cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC-CCCHHHhhhcC
Q 015455 271 HKHPM--TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCG-SPSEEYWKKSK 347 (406)
Q Consensus 271 ~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~ 347 (406)
..... ....++..|+|||++.+.. ++.++|||||||++|||++|..++...... ....+..... ......+...
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~- 238 (284)
T cd05081 162 KEYYKVREPGESPIFWYAPESLTESK-FSVASDVWSFGVVLYELFTYSDKSCSPPAE-FMRMMGNDKQGQMIVYHLIEL- 238 (284)
T ss_pred CcceeecCCCCCceEeeCHHHhccCC-cChHHHHHHHHHHHHHHhhcCCcCCCcchh-hhhhcccccccccchHHHHHH-
Confidence 22111 1122345699999987654 889999999999999999998776543221 1111100000 0000000000
Q ss_pred CCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 348 LPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
.... ........++..+.+||.+||+.||++|||+.++++.
T Consensus 239 ~~~~-----------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05081 239 LKNN-----------GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQ 279 (284)
T ss_pred HhcC-----------CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 0000 0001123567789999999999999999999999863
No 325
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=3.1e-41 Score=312.00 Aligned_cols=248 Identities=29% Similarity=0.437 Sum_probs=195.8
Q ss_pred ceeeeeccCCceEEEEEEEc----cCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 119 EKIDKIGQGTYSNVYKAKDM----LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 119 ~~~~~lg~G~~g~Vy~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
++.+.||.|.||.||+|... ..+..|+||.+.. ....+..+.+.+|++.+++++||||++++|++... ...++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~--~~~~l 78 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP-SSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIEN--EPLFL 78 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST-TSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESS--SSEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc-ccccccceeeeeccccccccccccccccccccccc--ccccc
Confidence 46789999999999999876 3467899999854 33455577888999999999999999999999953 34899
Q ss_pred EEecccc-cHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC
Q 015455 195 VFHYMEH-DLAGLAASP-EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK 272 (406)
Q Consensus 195 v~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~ 272 (406)
|+||+.+ .+.+.+... ...+++..+..++.||+.||.|||+.+++|+||+++|||++.++.+||+|||++........
T Consensus 79 v~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 79 VMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp EEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999986 566665554 57899999999999999999999999999999999999999999999999999987632211
Q ss_pred -CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 273 -HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 273 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
...........|+|||.+.+.. ++.++||||||+++|||++ |+.||...+..+....+.+....+
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~~~-~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~------------ 225 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKDGE-YTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLP------------ 225 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHHSE-ESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETT------------
T ss_pred ccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccce------------
Confidence 1122345678899999987654 8999999999999999999 789999888877777764321111
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
....++..+.++|..||+.||.+|||+.++++
T Consensus 226 ----------------~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 226 ----------------IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp ----------------SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred ----------------eccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 11357788999999999999999999999975
No 326
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.6e-40 Score=314.07 Aligned_cols=252 Identities=21% Similarity=0.317 Sum_probs=199.8
Q ss_pred CCcceeeeeccCCceEEEEEEE-----ccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCC
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKD-----MLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMS 189 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~ 189 (406)
++|.+.+.||+|+||.||++.+ ..++..||+|.++... .....+.+.+|+.+++++ +||||+++++++...
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-- 111 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA-HSSEREALMSELKIMSHLGNHENIVNLLGACTIG-- 111 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC-ChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC--
Confidence 6899999999999999999975 2345689999886543 234456788899999999 799999999988774
Q ss_pred ceEEEEEeccccc-HHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeecccccc
Q 015455 190 CSLYLVFHYMEHD-LAGLAASP-EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF 267 (406)
Q Consensus 190 ~~~~lv~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~ 267 (406)
...|++|||+.++ +...+... ...+++.++..++.|++.||.|||+.+++|+||||+|||++.++.++|+|||++...
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~ 191 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDI 191 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccc
Confidence 4589999999865 44444332 234899999999999999999999999999999999999999999999999999866
Q ss_pred CCCCCC-CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhh
Q 015455 268 DPNHKH-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK 345 (406)
Q Consensus 268 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 345 (406)
...... ......++..|+|||.+.+.. ++.++|||||||++|+|++ |..||.+....+.+.........+
T Consensus 192 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~------- 263 (302)
T cd05055 192 MNDSNYVVKGNARLPVKWMAPESIFNCV-YTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRM------- 263 (302)
T ss_pred cCCCceeecCCCCcccccCCHhhhccCC-CCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcC-------
Confidence 433211 112234578899999887654 8899999999999999998 999998876655444433211000
Q ss_pred cCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 346 SKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
......++.+.+||.+||+.||++|||+.++++
T Consensus 264 --------------------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 264 --------------------AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred --------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 001245778999999999999999999999985
No 327
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=3.2e-40 Score=303.03 Aligned_cols=244 Identities=23% Similarity=0.362 Sum_probs=195.7
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEecccc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH 201 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~ 201 (406)
+.||+|+||.||+|.. .+++.||+|.+.... .......+.+|+++++.++||||+++++++... ...+++|||+++
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~ 76 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDL-PQELKIKFLSEARILKQYDHPNIVKLIGVCTQR--QPIYIVMELVPG 76 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecC--CccEEEEECCCC
Confidence 3689999999999985 578899999886543 344455688899999999999999999998774 458999999987
Q ss_pred c-HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCccc
Q 015455 202 D-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280 (406)
Q Consensus 202 ~-l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~g 280 (406)
+ +...+......+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||++...............+
T Consensus 77 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (250)
T cd05085 77 GDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI 156 (250)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCC
Confidence 5 444544445578999999999999999999999999999999999999999999999999997654332221222344
Q ss_pred cCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCc
Q 015455 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREP 359 (406)
Q Consensus 281 t~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (406)
+..|+|||++.+.. ++.++||||||+++|+|++ |..||.+.........+......
T Consensus 157 ~~~y~aPE~~~~~~-~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---------------------- 213 (250)
T cd05085 157 PIKWTAPEALNYGR-YSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRM---------------------- 213 (250)
T ss_pred cccccCHHHhccCC-CCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCC----------------------
Confidence 67899999887644 8899999999999999998 99999888766555544321100
Q ss_pred hhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 360 YKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.....++..+.+|+.+||+.||++|||+.++++
T Consensus 214 ------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 214 ------SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred ------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 001246788999999999999999999999975
No 328
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-41 Score=326.33 Aligned_cols=252 Identities=26% Similarity=0.383 Sum_probs=207.3
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCc---E-EEEEEEecC-CCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCC
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGK---I-VALKKVRFD-NLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMS 189 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~-vaiK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~ 189 (406)
.++..+.++||+|+||.||+|+....+. . ||+|..+.. ....+....+.+|+++|++++|||||+++|++..+..
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP 235 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence 3667777999999999999998665432 3 899998763 3567788889999999999999999999999988544
Q ss_pred ceEEEEEecccccHH-HHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccC
Q 015455 190 CSLYLVFHYMEHDLA-GLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD 268 (406)
Q Consensus 190 ~~~~lv~e~~~~~l~-~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~ 268 (406)
+++|||+|.|+.+ +++......++..+...++.+.+.||+|||++++|||||-+.|+|++.++.+||+||||++.-.
T Consensus 236 --l~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~ 313 (474)
T KOG0194|consen 236 --LMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGS 313 (474)
T ss_pred --cEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCc
Confidence 9999999998554 4555555579999999999999999999999999999999999999999999999999987643
Q ss_pred CCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHH-hCCCCHHHhhhc
Q 015455 269 PNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKL-CGSPSEEYWKKS 346 (406)
Q Consensus 269 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~ 346 (406)
.-... .....-...|+|||.+... .|+.++|||||||++||+.+ |..||++....+...+|... ...+.
T Consensus 314 ~~~~~-~~~~klPirWLAPEtl~~~-~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~------- 384 (474)
T KOG0194|consen 314 QYVMK-KFLKKLPIRWLAPETLNTG-IFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPI------- 384 (474)
T ss_pred ceeec-cccccCcceecChhhhccC-ccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCC-------
Confidence 11111 1122346789999999876 49999999999999999998 88999999999988888542 11111
Q ss_pred CCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 347 KLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
....|+.+..++.+|+..||++|||+.++.+
T Consensus 385 ---------------------~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 385 ---------------------PSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred ---------------------CCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 1256778899999999999999999988754
No 329
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.9e-40 Score=304.21 Aligned_cols=246 Identities=32% Similarity=0.474 Sum_probs=202.7
Q ss_pred eccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEeccccc
Q 015455 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD 202 (406)
Q Consensus 124 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~~ 202 (406)
||.|+||.||++.+..+++.||+|.+..... .......+..|+.+++.++|+||+++++.+.. ....+++|||+.++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~e~~~~~ 78 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQT--EEKLYLVLEYAPGG 78 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeec--CCeeEEEEecCCCC
Confidence 6899999999999888899999999876543 23355678889999999999999999988876 45699999999654
Q ss_pred HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCccccC
Q 015455 203 LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTL 282 (406)
Q Consensus 203 l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~gt~ 282 (406)
.+.........+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++....... .......++.
T Consensus 79 ~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~ 157 (250)
T cd05123 79 ELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNTFCGTP 157 (250)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccCCcCCc
Confidence 444343444478999999999999999999999999999999999999999999999999998765432 1234456788
Q ss_pred cccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhh
Q 015455 283 WYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKR 362 (406)
Q Consensus 283 ~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (406)
.|+|||.+.+.. ++.++|+||||+++|+|++|..||...+.......+.... . .
T Consensus 158 ~~~~Pe~~~~~~-~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~--~--------~--------------- 211 (250)
T cd05123 158 EYLAPEVLLGKG-YGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDP--L--------R--------------- 211 (250)
T ss_pred cccChHHhCCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC--C--------C---------------
Confidence 999999887654 7889999999999999999999998777655555443310 0 0
Q ss_pred hhhhhcCCCCCChHHHHHHcccCCCCCCcCH---HHHhcCccc
Q 015455 363 CIQETFKDFPPSSLPLIETLLAIDPAERLTA---TVALNSEVS 402 (406)
Q Consensus 363 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta---~elL~h~~f 402 (406)
....+++.+.++|++||..||.+|||+ .++++||||
T Consensus 212 ----~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 212 ----FPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred ----CCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 112457889999999999999999999 999999998
No 330
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.5e-40 Score=307.28 Aligned_cols=252 Identities=23% Similarity=0.411 Sum_probs=202.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCc---EEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~ 192 (406)
.+|++.+.||+|+||.||+|++..+++ .||+|.+... ........+..|+.+++.++||||+++++++.. ....
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~--~~~~ 80 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG-YTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK--SRPV 80 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCcCcceEEEEECC--CCce
Confidence 568999999999999999999877665 6999998654 234456678899999999999999999998876 4458
Q ss_pred EEEEecccccH-HHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC
Q 015455 193 YLVFHYMEHDL-AGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 193 ~lv~e~~~~~l-~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~ 271 (406)
+++|||++++. ...+......+++..++.++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 81 MIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred EEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 99999998754 44555555678999999999999999999999999999999999999999999999999987664332
Q ss_pred CCCC-cCcc---ccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhc
Q 015455 272 KHPM-TSRV---VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS 346 (406)
Q Consensus 272 ~~~~-~~~~---gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 346 (406)
.... .... .+..|+|||++.+.. ++.++|||||||++|||++ |..||...+..+....+......+.
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~------- 232 (269)
T cd05065 161 SDPTYTSSLGGKIPIRWTAPEAIAYRK-FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPP------- 232 (269)
T ss_pred cccccccccCCCcceeecCHhHhccCc-ccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCC-------
Confidence 2111 1111 245799999987644 8999999999999999886 9999988877666555532211110
Q ss_pred CCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 347 KLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
...++..+.+++..||..+|.+|||+.++++.
T Consensus 233 ---------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 264 (269)
T cd05065 233 ---------------------PMDCPTALHQLMLDCWQKDRNARPKFGQIVST 264 (269)
T ss_pred ---------------------cccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 12567789999999999999999999999864
No 331
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3.4e-40 Score=306.50 Aligned_cols=251 Identities=22% Similarity=0.356 Sum_probs=201.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccC---CcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLT---GKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~ 192 (406)
++|.+.+.||+|+||.||+|.+... ...||+|...... .....+.+.+|+.+++.++||||+++++++.+. ..
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~---~~ 81 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-SPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN---PV 81 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC---Cc
Confidence 5789999999999999999986543 3478999876433 344566788899999999999999999988753 36
Q ss_pred EEEEeccccc-HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC
Q 015455 193 YLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 193 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~ 271 (406)
|++|||+.++ +.+.+......+++..++.++.|++.||.|||+.|++|+||||+|||++.++.++|+|||++.......
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 161 (270)
T cd05056 82 WIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES 161 (270)
T ss_pred EEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeeccccc
Confidence 8999999865 555554444568999999999999999999999999999999999999999999999999998765432
Q ss_pred CCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 272 KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 272 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
........++..|+|||.+.+. .++.++||||||+++|+|++ |..||.+.+..+....+......
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~------------- 227 (270)
T cd05056 162 YYKASKGKLPIKWMAPESINFR-RFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERL------------- 227 (270)
T ss_pred ceecCCCCccccccChhhhccC-CCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcC-------------
Confidence 2222223345689999988664 48899999999999999986 99999988877666554321100
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
.....+++.+.++|.+||..+|.+|||+.+++..
T Consensus 228 ---------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 228 ---------------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred ---------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0113578899999999999999999999998763
No 332
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=3.6e-40 Score=304.40 Aligned_cols=243 Identities=22% Similarity=0.295 Sum_probs=193.6
Q ss_pred eeccCCceEEEEEEEc--cCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEeccc
Q 015455 123 KIGQGTYSNVYKAKDM--LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYME 200 (406)
Q Consensus 123 ~lg~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~ 200 (406)
.||+|+||.||+|... .++..||+|++.... .....+.+.+|+.++++++||||+++++++.. ...++||||++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~---~~~~lv~e~~~ 77 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA---EALMLVMEMAS 77 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC---CCeEEEEEeCC
Confidence 4899999999999764 345579999886543 34445678899999999999999999998754 35899999998
Q ss_pred cc-HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC--cC
Q 015455 201 HD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM--TS 277 (406)
Q Consensus 201 ~~-l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~--~~ 277 (406)
++ +.+.+......+++..++.++.|++.||.|||++|++||||||+|||++.++.+||+|||++........... ..
T Consensus 78 ~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05115 78 GGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSA 157 (257)
T ss_pred CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCC
Confidence 75 4445544556899999999999999999999999999999999999999999999999999986644332211 11
Q ss_pred ccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCC
Q 015455 278 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKP 356 (406)
Q Consensus 278 ~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (406)
..+++.|+|||++.+.. ++.++|||||||++|+|++ |..||.+....+....+.+....
T Consensus 158 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~------------------- 217 (257)
T cd05115 158 GKWPLKWYAPECINFRK-FSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRL------------------- 217 (257)
T ss_pred CCCCcccCCHHHHccCC-CCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC-------------------
Confidence 22357899999887644 8899999999999999996 99999988776655544332100
Q ss_pred CCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 357 REPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
......++++.++|..||..||++||++.++++
T Consensus 218 ---------~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 218 ---------DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred ---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 011256788999999999999999999999865
No 333
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.4e-42 Score=327.65 Aligned_cols=259 Identities=29% Similarity=0.387 Sum_probs=212.9
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCC-CChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDN-LEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
.-|..++.||-|+||+|.+++..++...||+|.+++.. +.......+..|..||..-+++.||+|+..|.+. ..+|+
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDk--dnLYF 706 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDK--DNLYF 706 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccC--CceEE
Confidence 45889999999999999999988999999999997654 3566677888999999999999999997777774 45999
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCC-----
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDP----- 269 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~----- 269 (406)
||+|+.|+....++-+-+-|+|..++.++.++..|+++.|..|+|||||||+|||||.+|+|||+|||||.-+.-
T Consensus 707 VMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdsk 786 (1034)
T KOG0608|consen 707 VMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 786 (1034)
T ss_pred EEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccc
Confidence 999999876666655566899999999999999999999999999999999999999999999999999964420
Q ss_pred ---CCCC---------------------------------CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHH
Q 015455 270 ---NHKH---------------------------------PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELL 313 (406)
Q Consensus 270 ---~~~~---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell 313 (406)
...+ .....+||+.|+|||++.... |+.-+||||.|||||||+
T Consensus 787 YYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g-~~q~cdwws~gvil~em~ 865 (1034)
T KOG0608|consen 787 YYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTG-YTQLCDWWSVGVILYEML 865 (1034)
T ss_pred cccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccC-ccccchhhHhhHHHHHHh
Confidence 0000 013468999999999998755 999999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhh-hcCCCCCChHHHHHHcccCCCCCCcC
Q 015455 314 AGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQE-TFKDFPPSSLPLIETLLAIDPAERLT 392 (406)
Q Consensus 314 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt 392 (406)
.|++||...+..+...++... . .++.. ....+++++.++|.++.. +++.|..
T Consensus 866 ~g~~pf~~~tp~~tq~kv~nw---------~-----------------~~l~~~~~~~ls~e~~~li~kLc~-sad~RLG 918 (1034)
T KOG0608|consen 866 VGQPPFLADTPGETQYKVINW---------R-----------------NFLHIPYQGNLSKEALDLIQKLCC-SADSRLG 918 (1034)
T ss_pred hCCCCccCCCCCcceeeeeeh---------h-----------------hccccccccccCHHHHHHHHHHhc-Chhhhhc
Confidence 999999888776654444321 0 00100 113689999999998766 7888874
Q ss_pred ---HHHHhcCccccc
Q 015455 393 ---ATVALNSEVSYQ 404 (406)
Q Consensus 393 ---a~elL~h~~f~~ 404 (406)
++++-.||||+-
T Consensus 919 kng~d~vKaHpfFkg 933 (1034)
T KOG0608|consen 919 KNGADQVKAHPFFKG 933 (1034)
T ss_pred ccchhhhhcCccccc
Confidence 888999999984
No 334
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3.6e-40 Score=303.73 Aligned_cols=249 Identities=22% Similarity=0.393 Sum_probs=200.3
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
.+|++.+.||+|+||.||+|.+. ++..+|+|.+...... ...+.+|++++++++|||++++++++... ...+++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~v 77 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCTER--SPICLV 77 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEccC--CceEEE
Confidence 57899999999999999999864 5778999988754433 23577899999999999999999988764 458999
Q ss_pred EecccccHHH-HhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCC
Q 015455 196 FHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP 274 (406)
Q Consensus 196 ~e~~~~~l~~-~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~ 274 (406)
|||+.++.+. .+......+++..++.++.|++.||+|||+.+++|+||||+||+++.++.++|+|||++..........
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~ 157 (256)
T cd05112 78 FEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTS 157 (256)
T ss_pred EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccc
Confidence 9999876544 444445578999999999999999999999999999999999999999999999999998654332211
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
.....++..|+|||++.+.. ++.++||||||+++|+|++ |..||...........+.+.....
T Consensus 158 ~~~~~~~~~~~aPe~~~~~~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~--------------- 221 (256)
T cd05112 158 STGTKFPVKWSSPEVFSFSK-YSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLY--------------- 221 (256)
T ss_pred cCCCccchhhcCHhHhccCC-cChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCC---------------
Confidence 22334567899999887644 8899999999999999998 999998877666655543211000
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
.....++.+.+|+.+||+.||++|||+.++++.
T Consensus 222 -------------~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 222 -------------KPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred -------------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 002356789999999999999999999999863
No 335
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.5e-40 Score=319.85 Aligned_cols=254 Identities=23% Similarity=0.353 Sum_probs=195.8
Q ss_pred CCcceeeeeccCCceEEEEEEE-----ccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCC
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKD-----MLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMS 189 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~ 189 (406)
++|++.+.||+|+||+||+|++ ..+++.||||.++.... ......+.+|+.++.++ +||||+++++++... .
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-~ 84 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKP-G 84 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC-hHHHHHHHHHHHHHHhccCCccHhhhcceeecC-C
Confidence 6899999999999999999974 35678999999875432 33455678899999999 689999999988654 3
Q ss_pred ceEEEEEecccccHHH-HhcCC----------------------------------------------------------
Q 015455 190 CSLYLVFHYMEHDLAG-LAASP---------------------------------------------------------- 210 (406)
Q Consensus 190 ~~~~lv~e~~~~~l~~-~~~~~---------------------------------------------------------- 210 (406)
..++++|||++++.+. .+...
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 4689999999875443 33211
Q ss_pred --------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC-CCcCcccc
Q 015455 211 --------EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH-PMTSRVVT 281 (406)
Q Consensus 211 --------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~-~~~~~~gt 281 (406)
...+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||++......... ......++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 244 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLP 244 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCC
Confidence 124688889999999999999999999999999999999999999999999999865322211 11223456
Q ss_pred CcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCch
Q 015455 282 LWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPY 360 (406)
Q Consensus 282 ~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (406)
+.|+|||++.+.. ++.++||||||+++|+|++ |..||.+......+.........+
T Consensus 245 ~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------- 301 (343)
T cd05103 245 LKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM---------------------- 301 (343)
T ss_pred cceECcHHhcCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCC----------------------
Confidence 7899999887644 8999999999999999997 999998765433322222110000
Q ss_pred hhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 361 KRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 361 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
......++++.+++..||+.||.+|||+.++++|
T Consensus 302 -----~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 302 -----RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred -----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 0001356679999999999999999999999986
No 336
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2e-40 Score=312.34 Aligned_cols=258 Identities=20% Similarity=0.278 Sum_probs=199.1
Q ss_pred CCcceeeeeccCCceEEEEEEEccC--------------CcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEe
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLT--------------GKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLE 181 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~--------------~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~ 181 (406)
++|++.+.||+|+||.||+|++..+ ...||+|.++... .......+.+|++++++++|+|+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV-TKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 5899999999999999999986432 2358999987543 344556788999999999999999999
Q ss_pred eeeeecCCceEEEEEecccccHHH-HhcCCC-----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeE
Q 015455 182 GLVTSRMSCSLYLVFHYMEHDLAG-LAASPE-----------VKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLL 249 (406)
Q Consensus 182 ~~~~~~~~~~~~lv~e~~~~~l~~-~~~~~~-----------~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIl 249 (406)
+++... ...+++|||+.++.+. .+.... ..+++..+..++.|++.||+|||+.|++||||||+||+
T Consensus 84 ~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil 161 (295)
T cd05097 84 GVCVSD--DPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCL 161 (295)
T ss_pred EEEcCC--CccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEE
Confidence 998764 4589999999875443 332211 24788999999999999999999999999999999999
Q ss_pred EcCCCcEEEeeeccccccCCCCCC-CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh--CCCCCCCCChHH
Q 015455 250 IDDDGVLKIADFGLASFFDPNHKH-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA--GKPIMPGRTEVE 326 (406)
Q Consensus 250 l~~~~~~kl~DFgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~--g~~pf~~~~~~~ 326 (406)
++.++.+||+|||++......... ......++..|+|||++.+.. ++.++|||||||++|+|++ |..||...+..+
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~ 240 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGK-FTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ 240 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCC-cCchhhHHHHHHHHHHHHHcCCCCCCcccChHH
Confidence 999999999999999765432211 122334577899999887654 8999999999999999988 668888877766
Q ss_pred HHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 327 QLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 327 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
....+.+......... .....+.+++.+.+||.+||+.||.+|||+.++++
T Consensus 241 ~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 241 VIENTGEFFRNQGRQI---------------------YLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHHhhhhccccc---------------------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 6555543211100000 00111246788999999999999999999999964
No 337
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=3.6e-40 Score=303.81 Aligned_cols=243 Identities=26% Similarity=0.399 Sum_probs=198.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.+.||+|+||.||+|.. .|+.||+|.+..... ....+.+|+.+++.++|+||+++++++.. ....+++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v 78 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQ--GNPLYIV 78 (256)
T ss_pred hhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcC--CCCeEEE
Confidence 6899999999999999999974 588999999875432 45678889999999999999999999886 4558999
Q ss_pred Eecccc-cHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 196 FHYMEH-DLAGLAASPE-VKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 196 ~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
|||+++ .+.+.+.... ..+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++.......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~-- 156 (256)
T cd05039 79 TEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ-- 156 (256)
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccccc--
Confidence 999996 4555443332 368999999999999999999999999999999999999999999999999998763222
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
.....+..|+|||++.+.. ++.++|+||||+++|+|++ |..||...+..+....+.... .+
T Consensus 157 --~~~~~~~~~~ape~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~-------------- 218 (256)
T cd05039 157 --DSGKLPVKWTAPEALREKK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGY-RM-------------- 218 (256)
T ss_pred --ccCCCcccccCchhhcCCc-CCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCC-CC--------------
Confidence 1233467799999887644 8889999999999999997 999998776655444332210 00
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.....+++.+.++|..||..+|++|||+.+++.
T Consensus 219 -------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 219 -------------EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred -------------CCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 011256788999999999999999999999985
No 338
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.2e-40 Score=313.91 Aligned_cols=252 Identities=23% Similarity=0.340 Sum_probs=198.4
Q ss_pred CCcceeeeeccCCceEEEEEEEcc-------CCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeec
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDML-------TGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSR 187 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~-------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~ 187 (406)
++|.+.+.||+|+||.||++++.. ++..||+|.+.... .......+.+|+++++.+ +||||+++++++...
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 689999999999999999998643 23579999987543 233455677899999999 799999999998774
Q ss_pred CCceEEEEEeccccc-HHHHhcCC---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEc
Q 015455 188 MSCSLYLVFHYMEHD-LAGLAASP---------------EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLID 251 (406)
Q Consensus 188 ~~~~~~lv~e~~~~~-l~~~~~~~---------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~ 251 (406)
...|++|||+.++ +.+++... ...+++.++..++.|++.||+|||+.|++||||||+|||++
T Consensus 97 --~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~ 174 (307)
T cd05098 97 --GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 174 (307)
T ss_pred --CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEc
Confidence 4589999999874 44444322 23588999999999999999999999999999999999999
Q ss_pred CCCcEEEeeeccccccCCCCCC-CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 015455 252 DDGVLKIADFGLASFFDPNHKH-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLH 329 (406)
Q Consensus 252 ~~~~~kl~DFgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~ 329 (406)
.++.+||+|||++......... ......+++.|+|||++.+.. ++.++|||||||++|+|++ |..||.+.+..+...
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~ 253 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 253 (307)
T ss_pred CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCC-CCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHH
Confidence 9999999999999765432211 111223457899999887654 8899999999999999998 889998776655544
Q ss_pred HHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 330 KIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 330 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
.+..... ......++.++.+||..||..+|.+|||+.+++++
T Consensus 254 ~~~~~~~----------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 254 LLKEGHR----------------------------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred HHHcCCC----------------------------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 4432110 01112567889999999999999999999999864
No 339
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2.6e-40 Score=310.66 Aligned_cols=250 Identities=21% Similarity=0.314 Sum_probs=196.1
Q ss_pred CcceeeeeccCCceEEEEEEEcc-----CCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCce
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDML-----TGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS 191 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~ 191 (406)
+|++.+.||+|+||.||+|.+.. ....+|+|.+.... .......+.+|+.+++.++||||+++++.+... ..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~ 77 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA-SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQD--GP 77 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC-CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecC--CC
Confidence 47889999999999999998643 23578888876443 334456788899999999999999999988764 45
Q ss_pred EEEEEecccccHHH-HhcC-----------------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCC
Q 015455 192 LYLVFHYMEHDLAG-LAAS-----------------------PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSN 247 (406)
Q Consensus 192 ~~lv~e~~~~~l~~-~~~~-----------------------~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~N 247 (406)
.++++||+.++.+. ++.. ....+++..+..++.|++.||.|||+.+++||||||+|
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~n 157 (290)
T cd05045 78 LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARN 157 (290)
T ss_pred cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhhe
Confidence 89999999865444 3221 12358899999999999999999999999999999999
Q ss_pred eEEcCCCcEEEeeeccccccCCCCCC-CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChH
Q 015455 248 LLIDDDGVLKIADFGLASFFDPNHKH-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEV 325 (406)
Q Consensus 248 Ill~~~~~~kl~DFgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~ 325 (406)
||+++++.+||+|||++......... ......++..|+|||.+.+.. ++.++||||||+++|+|++ |..||.+....
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 236 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE 236 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCC-cchHhHHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 99999999999999999865332221 112234577899999886644 8899999999999999998 99999887766
Q ss_pred HHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 326 EQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 326 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
+....+.+.... .....++.++.+||..||+.||.+|||+.++++
T Consensus 237 ~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 237 RLFNLLKTGYRM----------------------------ERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred HHHHHHhCCCCC----------------------------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 554443221100 011256778999999999999999999999975
No 340
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8e-43 Score=304.82 Aligned_cols=288 Identities=35% Similarity=0.534 Sum_probs=234.0
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCc---eE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC---SL 192 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~---~~ 192 (406)
.+.+--+-||-|+||+||.+.+..+|+.||+|++..-...-...+.+.+|+.+|..++|.|++..+++....... .+
T Consensus 53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred ccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence 456667889999999999999999999999999864332334456677899999999999999988776543222 26
Q ss_pred EEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC
Q 015455 193 YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK 272 (406)
Q Consensus 193 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~ 272 (406)
|+++|.|..++...+..+. .++.+.++-+++||+.||.|||+.||.||||||.|.|++.+..+||||||+++..+....
T Consensus 133 YV~TELmQSDLHKIIVSPQ-~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~ 211 (449)
T KOG0664|consen 133 YVLTELMQSDLHKIIVSPQ-ALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDR 211 (449)
T ss_pred HHHHHHHHhhhhheeccCC-CCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhh
Confidence 8899999988888666654 789999999999999999999999999999999999999999999999999998877776
Q ss_pred CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCC---
Q 015455 273 HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLP--- 349 (406)
Q Consensus 273 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--- 349 (406)
...+..+.|..|+|||+++|...|+.+.||||.|||+.||+..+..|...++.++++.|.+.+|+|+.+.++...-.
T Consensus 212 ~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~ 291 (449)
T KOG0664|consen 212 LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKN 291 (449)
T ss_pred hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHH
Confidence 66777788999999999999999999999999999999999999999999999999999999999998765432211
Q ss_pred CcccCCCCCchhhhhhhhc--CCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 350 NATLFKPREPYKRCIQETF--KDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
+.-......+...-+.... .+-..+..+++.+||..||.+|.+.++++.|+++.+
T Consensus 292 H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e 348 (449)
T KOG0664|consen 292 HVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEE 348 (449)
T ss_pred HhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccc
Confidence 1111111111111111111 123345789999999999999999999999999764
No 341
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=4.3e-40 Score=304.25 Aligned_cols=247 Identities=23% Similarity=0.388 Sum_probs=199.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.+.||+|+||.||++.+ ..+..+|+|.+.... .....+.+|+.+++.++|+||+++++++.. ...+++
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~-~~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~v 78 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVTK---EPIYII 78 (260)
T ss_pred cceeEEeEecCccceEEEEEEe-cCCccEEEEecCCCh---hHHHHHHHHHHHHHhcCCCCcceEEEEEcC---CCeEEE
Confidence 6899999999999999999975 456679999876432 234567889999999999999999988776 347999
Q ss_pred Eecccc-cHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 196 FHYMEH-DLAGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 196 ~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
|||+++ ++.+.+.. ....+++..++.++.|++.||.|||+.|++|+||||+||+++.++.+||+|||++..+......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 158 (260)
T cd05073 79 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 158 (260)
T ss_pred EEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcc
Confidence 999986 55555543 3456889999999999999999999999999999999999999999999999999876433322
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
......++..|+|||++.+.. ++.++|+|||||++|+|++ |+.||.+.+..+....+......
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~--------------- 222 (260)
T cd05073 159 AREGAKFPIKWTAPEAINFGS-FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM--------------- 222 (260)
T ss_pred cccCCcccccccCHhHhccCC-cCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCC---------------
Confidence 222334567899999987644 8889999999999999998 99999987766655544321100
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
......+.++.+++.+||+.||++|||+.++++
T Consensus 223 -------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 223 -------------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred -------------CCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 011356778999999999999999999998864
No 342
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=3e-40 Score=309.36 Aligned_cols=269 Identities=21% Similarity=0.326 Sum_probs=198.4
Q ss_pred CCcceeeeeccCCceEEEEEEE----ccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCce
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKD----MLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS 191 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~----~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~ 191 (406)
..|++++.||+|+||.||+++. ..++..||+|.++... .......+.+|+.+++.++|||++++++++.......
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 4589999999999999999974 4568899999986543 3344567889999999999999999999988765567
Q ss_pred EEEEEecccccHHH-HhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 192 LYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 192 ~~lv~e~~~~~l~~-~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
.+++|||++++.+. .+......+++..+..++.||+.||+|||+.|++||||||+||+++.++.++|+|||++..+...
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 162 (284)
T ss_pred eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccC
Confidence 89999999875444 44444446899999999999999999999999999999999999999999999999999876533
Q ss_pred CCC--CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCC
Q 015455 271 HKH--PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348 (406)
Q Consensus 271 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 348 (406)
... ......++..|+|||++.+.. ++.++|||||||++|+|++++.|+..... .. .+..+....+.......
T Consensus 163 ~~~~~~~~~~~~~~~y~apE~~~~~~-~~~~~Di~slG~il~ellt~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~ 236 (284)
T cd05079 163 KEYYTVKDDLDSPVFWYAPECLIQSK-FYIASDVWSFGVTLYELLTYCDSESSPMT--LF---LKMIGPTHGQMTVTRLV 236 (284)
T ss_pred ccceeecCCCCCCccccCHHHhccCC-CCccccchhhhhhhhhhhcCCCCCccccc--hh---hhhcccccccccHHHHH
Confidence 221 112345677899999887654 88999999999999999998876543211 00 11111110000000000
Q ss_pred CCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 349 PNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
. .... .........++..+.+||.+||+.||.+|||+.++++.
T Consensus 237 -~-~~~~------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 237 -R-VLEE------GKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred -H-HHHc------CccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 0 0000 00001123577889999999999999999999999864
No 343
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=4.1e-40 Score=303.14 Aligned_cols=249 Identities=28% Similarity=0.434 Sum_probs=201.4
Q ss_pred cceeeeeccCCceEEEEEEEccCC----cEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEE
Q 015455 118 FEKIDKIGQGTYSNVYKAKDMLTG----KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 118 y~~~~~lg~G~~g~Vy~~~~~~~~----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~ 193 (406)
|++.+.||.|+||.||++++...+ ..||+|.+..... ......+..|+.++..++|+||+++++++.+. ...+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~ 77 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD-EQQIEEFLREARIMRKLDHPNIVKLLGVCTEE--EPLM 77 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC-hHHHHHHHHHHHHHHhcCCCchheEEEEEcCC--CeeE
Confidence 456789999999999999987766 8999999865432 22456788899999999999999999988874 5699
Q ss_pred EEEeccccc-HHHHhcCCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC
Q 015455 194 LVFHYMEHD-LAGLAASPEVK-FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 194 lv~e~~~~~-l~~~~~~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~ 271 (406)
++|||+.++ +...+...... +++..+..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||++.......
T Consensus 78 ~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 78 IVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred EEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 999999874 44444433333 9999999999999999999999999999999999999999999999999998765442
Q ss_pred CCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 272 KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 272 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
........+++.|+|||.+.+. .++.++|+||||+++|+|++ |.+||...+.......+......+
T Consensus 158 ~~~~~~~~~~~~y~~Pe~~~~~-~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~------------ 224 (258)
T smart00219 158 YYKKKGGKLPIRWMAPESLKDG-KFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLP------------ 224 (258)
T ss_pred ccccccCCCcccccChHHhccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCC------------
Confidence 2222123367899999988554 48999999999999999998 889998877766666554321100
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.....+.++.+++.+||+.||++|||+.++++
T Consensus 225 ----------------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 225 ----------------KPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred ----------------CCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 01246788999999999999999999999985
No 344
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.1e-40 Score=312.35 Aligned_cols=253 Identities=22% Similarity=0.340 Sum_probs=201.0
Q ss_pred cCCcceeeeeccCCceEEEEEEEc-------cCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeee
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDM-------LTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTS 186 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~-------~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~ 186 (406)
.++|.+.+.||+|+||.||+|+.. .++..||+|.+.... .......+.+|+.+++.+ +||||+++++++..
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc-chHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 378999999999999999999742 234579999886432 334456788899999999 89999999999887
Q ss_pred cCCceEEEEEeccccc-HHHHhcCC---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEE
Q 015455 187 RMSCSLYLVFHYMEHD-LAGLAASP---------------EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLI 250 (406)
Q Consensus 187 ~~~~~~~lv~e~~~~~-l~~~~~~~---------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll 250 (406)
. ...|++|||+.++ +..++... ...+++..+..++.||+.||.|||+.|++||||||+|||+
T Consensus 93 ~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili 170 (304)
T cd05101 93 D--GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLV 170 (304)
T ss_pred C--CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEE
Confidence 4 4589999999875 44444321 2357889999999999999999999999999999999999
Q ss_pred cCCCcEEEeeeccccccCCCCCCC-CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 015455 251 DDDGVLKIADFGLASFFDPNHKHP-MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQL 328 (406)
Q Consensus 251 ~~~~~~kl~DFgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~ 328 (406)
+.++.+||+|||+++......... .....+++.|+|||++.+.. ++.++||||||+++|+|++ |..||.+.+..+..
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~ 249 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 249 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCC-CCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHH
Confidence 999999999999998765332221 22234567899999887644 8999999999999999998 88999888776665
Q ss_pred HHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 329 HKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 329 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
..+...... .....++..+.+||.+||..+|.+|||+.++++.
T Consensus 250 ~~~~~~~~~----------------------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 250 KLLKEGHRM----------------------------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHHcCCcC----------------------------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 554321100 0012567889999999999999999999999864
No 345
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=3.7e-40 Score=303.84 Aligned_cols=243 Identities=22% Similarity=0.382 Sum_probs=196.5
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.+.||+|+||.||++.. .|..||+|.+.... ....+.+|+.++++++|+|++++++++... ....+++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~lv 78 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEE-KGGLYIV 78 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCc----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcC-CCceEEE
Confidence 6899999999999999999964 57889999886432 234677899999999999999999876543 3458999
Q ss_pred Eecccc-cHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 196 FHYMEH-DLAGLAASP-EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 196 ~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
|||+++ .+.+.+... ...+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||++.......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-- 156 (256)
T cd05082 79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 156 (256)
T ss_pred EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccC--
Confidence 999986 555554433 3358999999999999999999999999999999999999999999999999988654322
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
....++..|+|||++.+.. ++.++|||||||++|+|++ |+.||...+..+....+.+....
T Consensus 157 --~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--------------- 218 (256)
T cd05082 157 --DTGKLPVKWTAPEALREKK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM--------------- 218 (256)
T ss_pred --CCCccceeecCHHHHccCC-CCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC---------------
Confidence 2334467899999887644 8899999999999999997 99999877665555544321000
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.....+++.+.++|.+||+.||.+|||+.++++
T Consensus 219 -------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 219 -------------DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred -------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 011356888999999999999999999999975
No 346
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=6e-40 Score=301.37 Aligned_cols=244 Identities=25% Similarity=0.379 Sum_probs=195.6
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEecccc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH 201 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~ 201 (406)
+.||.|+||.||++.+.. ++.||+|.+...... .....+.+|++++++++|+||+++++++... ...+++|||+.+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~v~e~~~~ 76 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQK--QPIYIVMELVPG 76 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecC--CCeEEEEEcCCC
Confidence 368999999999999766 999999998765433 4556788899999999999999999988764 458999999976
Q ss_pred c-HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC-cCcc
Q 015455 202 D-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM-TSRV 279 (406)
Q Consensus 202 ~-l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~-~~~~ 279 (406)
+ +.+.+......+++..+..++.|++.||.|||+++++||||||+|||++.++.++|+|||++........... ....
T Consensus 77 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (251)
T cd05041 77 GSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQ 156 (251)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCc
Confidence 5 5555545455789999999999999999999999999999999999999999999999999986542221111 1123
Q ss_pred ccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCC
Q 015455 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPRE 358 (406)
Q Consensus 280 gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (406)
++..|+|||.+.+.. ++.++|+|||||++|+|++ |..||.+.........+......+
T Consensus 157 ~~~~y~~PE~~~~~~-~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~-------------------- 215 (251)
T cd05041 157 IPIKWTAPEALNYGR-YTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMP-------------------- 215 (251)
T ss_pred ceeccCChHhhccCC-CCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCC--------------------
Confidence 366799999887654 8999999999999999999 889998877655444432211000
Q ss_pred chhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 359 PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.....+..+.++|.+||..+|.+|||+.++|+
T Consensus 216 --------~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 216 --------APQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred --------CCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 01246778999999999999999999999986
No 347
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5e-40 Score=312.44 Aligned_cols=251 Identities=22% Similarity=0.338 Sum_probs=198.5
Q ss_pred CCcceeeeeccCCceEEEEEEEc-------cCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeec
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDM-------LTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSR 187 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~-------~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~ 187 (406)
++|.+.+.||+|+||.||+|++. .....||+|.++... .......+.+|+.+++.+ +||||+++++++...
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 68999999999999999999753 234579999886543 334456688899999999 699999999988764
Q ss_pred CCceEEEEEeccccc-HHHHhcCC---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEc
Q 015455 188 MSCSLYLVFHYMEHD-LAGLAASP---------------EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLID 251 (406)
Q Consensus 188 ~~~~~~lv~e~~~~~-l~~~~~~~---------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~ 251 (406)
...|++|||+.++ +..++... ...+++..+..++.||+.||.|||++|++||||||+|||++
T Consensus 91 --~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~ 168 (314)
T cd05099 91 --GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVT 168 (314)
T ss_pred --CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEc
Confidence 4589999999875 44443221 24589999999999999999999999999999999999999
Q ss_pred CCCcEEEeeeccccccCCCCCC-CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 015455 252 DDGVLKIADFGLASFFDPNHKH-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLH 329 (406)
Q Consensus 252 ~~~~~kl~DFgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~ 329 (406)
.++.+||+|||+++........ ......++..|+|||++.+. .++.++|||||||++|+|++ |..||.+.+..+.+.
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~ 247 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDR-VYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFK 247 (314)
T ss_pred CCCcEEEccccccccccccccccccccCCCCccccCHHHHccC-CcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 9999999999999866432211 11122345679999988764 48999999999999999999 899998887766665
Q ss_pred HHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 330 KIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 330 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.+...... .....++.++.++|.+||+.||.+|||+.++++
T Consensus 248 ~~~~~~~~----------------------------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 248 LLREGHRM----------------------------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHHcCCCC----------------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 55331100 011256778999999999999999999999985
No 348
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=5.2e-40 Score=302.86 Aligned_cols=245 Identities=27% Similarity=0.367 Sum_probs=198.2
Q ss_pred eeeccCCceEEEEEEEcc-CCc--EEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEec
Q 015455 122 DKIGQGTYSNVYKAKDML-TGK--IVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHY 198 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~-~~~--~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~ 198 (406)
+.||+|+||.||+|.+.. +++ .||+|.+...... ...+.+.+|+.++++++||||+++++++.. ...+++|||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~v~e~ 76 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT---HPLMMVTEL 76 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC---CeEEEEEEe
Confidence 368999999999998755 333 6999998766544 556778899999999999999999998876 568999999
Q ss_pred ccc-cHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC--C
Q 015455 199 MEH-DLAGLAASPE-VKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH--P 274 (406)
Q Consensus 199 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~--~ 274 (406)
+++ .+...+.... ..+++..++.++.|++.||+|||+.|++|+||||+||+++.++.+||+|||++..+...... .
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 77 APLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred cCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence 976 4555554433 57899999999999999999999999999999999999999999999999999877543221 1
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
.....++..|+|||++.+.. ++.++|||||||++|+|++ |..||...+..+....+.......
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~--------------- 220 (257)
T cd05040 157 EEHLKVPFAWCAPESLRTRT-FSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERL--------------- 220 (257)
T ss_pred ccCCCCCceecCHHHhcccC-cCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcC---------------
Confidence 12345678899999887644 8999999999999999998 999998887777666554311000
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
......|..+.+++..||+.+|++|||+.++++
T Consensus 221 ------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 221 ------------ERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred ------------CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 001246778999999999999999999999975
No 349
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=4.2e-40 Score=306.61 Aligned_cols=253 Identities=19% Similarity=0.341 Sum_probs=200.0
Q ss_pred CCcceeeeeccCCceEEEEEEEcc-----CCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCc
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDML-----TGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~ 190 (406)
++|++...||+|+||.||+|+... +.+.||+|.+.... .......+.+|++++++++|+||+++++++.+. .
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~ 81 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCREA--E 81 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEECCC--C
Confidence 679999999999999999998643 34689999876433 233456788899999999999999999988763 4
Q ss_pred eEEEEEecccccHHH-HhcCCC--------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeee
Q 015455 191 SLYLVFHYMEHDLAG-LAASPE--------VKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADF 261 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~-~~~~~~--------~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DF 261 (406)
..+++|||++++.+. .+.... ..+++..+..++.|++.||.|||+.+|+||||||+|||++.++.++|+||
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccc
Confidence 589999999865444 433222 16899999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCH
Q 015455 262 GLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSE 340 (406)
Q Consensus 262 gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~ 340 (406)
|++...............++..|+|||.+.+.. ++.++||||||+++|+|++ |..||.+.........+.......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~-- 238 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDD-FSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLEL-- 238 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCC--
Confidence 998755333222233445678899999887654 7889999999999999998 888998766655544432210000
Q ss_pred HHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 341 EYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
.....++..+.++|.+||+.||.+|||+.+++..
T Consensus 239 -------------------------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 239 -------------------------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred -------------------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 0012567789999999999999999999999864
No 350
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=4.5e-40 Score=307.36 Aligned_cols=253 Identities=21% Similarity=0.285 Sum_probs=200.5
Q ss_pred cCCcceeeeeccCCceEEEEEEEcc----CCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCc
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDML----TGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~ 190 (406)
.++|++.+.||+|+||.||+|.+.. ++..||+|.+... ........+.+|+.+++.++|+||+++++++... ..
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~-~~ 82 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH-ASEIQVTLLLQESCLLYGLSHQNILPILHVCIED-GE 82 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC-CC
Confidence 3789999999999999999998765 2578999987643 3455567788899999999999999999987654 34
Q ss_pred eEEEEEeccccc-HHHHhcCC-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeec
Q 015455 191 SLYLVFHYMEHD-LAGLAASP-------EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFG 262 (406)
Q Consensus 191 ~~~lv~e~~~~~-l~~~~~~~-------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFg 262 (406)
..+++++|+.++ +..++... ...+++..++.++.|++.||+|||+.+++||||||+||+++.++.+||+|||
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g 162 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNA 162 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCC
Confidence 588999999864 44443221 1468999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCC-CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCH
Q 015455 263 LASFFDPNHKHP-MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSE 340 (406)
Q Consensus 263 la~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~ 340 (406)
+++.+....... .....++..|+|||++.+.. ++.++|||||||++|++++ |+.||...+..+....+.... .+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~-- 238 (280)
T cd05043 163 LSRDLFPMDYHCLGDNENRPVKWMALESLVNKE-YSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGY-RL-- 238 (280)
T ss_pred CcccccCCceEEeCCCCCcchhccCHHHHhcCC-CCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCC-CC--
Confidence 998664332211 12234577899999887654 8999999999999999999 999998876655443332210 00
Q ss_pred HHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 341 EYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.....+++++.+++..||..||++|||+.++++
T Consensus 239 -------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 239 -------------------------AQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred -------------------------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 001245778999999999999999999999985
No 351
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.7e-41 Score=336.33 Aligned_cols=249 Identities=23% Similarity=0.379 Sum_probs=207.8
Q ss_pred CCcceeeeeccCCceEEEEEEEc-----cCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCc
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDM-----LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~ 190 (406)
.+.+..+.||+|.||+||+|+.. .+...||||.++... +......|.+|++++..++|||||+|+|+|... .
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a-~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~--~ 562 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA-ENQARQDFRREAELLAELQHPNIVRLLGVCREG--D 562 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc-cHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC--C
Confidence 56777899999999999999742 334689999986543 444677899999999999999999999999984 4
Q ss_pred eEEEEEecccccHH-HHhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcE
Q 015455 191 SLYLVFHYMEHDLA-GLAASP-------------EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVL 256 (406)
Q Consensus 191 ~~~lv~e~~~~~l~-~~~~~~-------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~ 256 (406)
.++||+|||..+.+ .++... ..+++..+...++.|||.||.||-++.+|||||...|+||.++..|
T Consensus 563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~V 642 (774)
T KOG1026|consen 563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVV 642 (774)
T ss_pred eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEE
Confidence 59999999997544 444321 1238899999999999999999999999999999999999999999
Q ss_pred EEeeeccccccCCCCCCCCc-CccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHH
Q 015455 257 KIADFGLASFFDPNHKHPMT-SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKL 334 (406)
Q Consensus 257 kl~DFgla~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~ 334 (406)
||+||||++..-..+..... ...-..+|||||.++-+. |+.+||||||||+|||+++ |..|+.+..+.+.++.|.+.
T Consensus 643 KIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~k-FTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g 721 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGK-FTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAG 721 (774)
T ss_pred EecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCc-ccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcC
Confidence 99999999876444332222 334578999999998654 9999999999999999998 99999999999999988763
Q ss_pred hCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHH
Q 015455 335 CGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVA 396 (406)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~el 396 (406)
.- -..+...|.++.+||..||+..|++||+++|+
T Consensus 722 ~l----------------------------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI 755 (774)
T KOG1026|consen 722 QL----------------------------LSCPENCPTEVYSLMLECWNENPKRRPSFKEI 755 (774)
T ss_pred Cc----------------------------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 21 12234789999999999999999999999987
No 352
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=4e-40 Score=309.02 Aligned_cols=251 Identities=22% Similarity=0.372 Sum_probs=199.2
Q ss_pred CCcceeeeeccCCceEEEEEEEcc-----CCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCc
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDML-----TGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~ 190 (406)
++|++.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.++||||+++++++... .
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~--~ 81 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDHPNIVKLLGVCAVG--K 81 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc-CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC--C
Confidence 689999999999999999998643 57899999986543 334456688899999999999999999988764 4
Q ss_pred eEEEEEeccccc-HHHHhcCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCe
Q 015455 191 SLYLVFHYMEHD-LAGLAASP---------------------EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNL 248 (406)
Q Consensus 191 ~~~lv~e~~~~~-l~~~~~~~---------------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NI 248 (406)
..+++|||+.++ +...+... ...+++..++.++.|++.||+|||+.+++||||||+||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ni 161 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNC 161 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhhe
Confidence 589999999874 44444311 13578899999999999999999999999999999999
Q ss_pred EEcCCCcEEEeeeccccccCCCCC-CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHH
Q 015455 249 LIDDDGVLKIADFGLASFFDPNHK-HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVE 326 (406)
Q Consensus 249 ll~~~~~~kl~DFgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~ 326 (406)
|++.++.++|+|||++........ ........+..|+|||.+.+.. ++.++|||||||++|+|++ |..||.+.+..+
T Consensus 162 l~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~ 240 (288)
T cd05050 162 LVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNR-YTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE 240 (288)
T ss_pred EecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCC-CCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 999999999999999876533221 1112234467799999887654 8999999999999999997 888998877766
Q ss_pred HHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 327 QLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 327 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
....+...... .....++..+.+||.+||+.||.+|||+.|+++
T Consensus 241 ~~~~~~~~~~~----------------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 241 VIYYVRDGNVL----------------------------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHHHhcCCCC----------------------------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 55544321100 001246778999999999999999999999875
No 353
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.1e-39 Score=304.77 Aligned_cols=250 Identities=25% Similarity=0.340 Sum_probs=201.1
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCc----EEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCce
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGK----IVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS 191 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~ 191 (406)
.+|++.+.||+|+||.||+|.+..+|. .||+|.+.... .......+.+|+.++..++||||+++++++.. ..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~ 82 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET-SPKANKEILDEAYVMASVDHPHVVRLLGICLS---SQ 82 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec---Cc
Confidence 679999999999999999998776665 58999876553 24455678889999999999999999998876 45
Q ss_pred EEEEEecccc-cHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 192 LYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 192 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
.+++|||+.+ ++.+.+......+++..+..++.||+.||+|||+.|++||||||+|||++.++.+||+|||+++.....
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~ 162 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVD 162 (279)
T ss_pred eEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCc
Confidence 8999999986 555555555567999999999999999999999999999999999999999999999999999876533
Q ss_pred CCCCC-cCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCC
Q 015455 271 HKHPM-TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348 (406)
Q Consensus 271 ~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 348 (406)
..... ....++..|+|||.+... .++.++|+||||+++|||++ |+.||.+....+....+..... .
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~---------- 230 (279)
T cd05057 163 EKEYHAEGGKVPIKWMALESILHR-IYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGER-L---------- 230 (279)
T ss_pred ccceecCCCcccccccCHHHhhcC-CcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCC-C----------
Confidence 22111 112235689999988654 48899999999999999998 9999988876665554432110 0
Q ss_pred CCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 349 PNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
......+..+.+++.+||..||.+|||+.++++
T Consensus 231 -----------------~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 231 -----------------PQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred -----------------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 001235667899999999999999999998864
No 354
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=3.7e-40 Score=304.49 Aligned_cols=253 Identities=25% Similarity=0.394 Sum_probs=200.6
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecC---CCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFD---NLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~ 193 (406)
+|.+.+.||+|+||.||++++...+..+++|+++.. .........+..|+.+++.++||||+++++++.+. ...+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 78 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLER--DAFC 78 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcC--CceE
Confidence 488999999999999999998877777777766432 22233344566799999999999999999988764 3589
Q ss_pred EEEecccccHHH-Hhc---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCC
Q 015455 194 LVFHYMEHDLAG-LAA---SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDP 269 (406)
Q Consensus 194 lv~e~~~~~l~~-~~~---~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~ 269 (406)
++|||+.++.+. .+. .....+++..++.++.|++.||.|||+.|++|+||+|+||+++. +.++|+|||++.....
T Consensus 79 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~ 157 (260)
T cd08222 79 IITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMG 157 (260)
T ss_pred EEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCC
Confidence 999999875444 332 34457999999999999999999999999999999999999975 6799999999987643
Q ss_pred CCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCC
Q 015455 270 NHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLP 349 (406)
Q Consensus 270 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 349 (406)
... ......+++.|+|||.+.+.. ++.++|+||||+++|+|++|..||...+.......+.... ++
T Consensus 158 ~~~-~~~~~~~~~~~~~pe~~~~~~-~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~---------- 223 (260)
T cd08222 158 SCD-LATTFTGTPYYMSPEALKHQG-YDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGP--TP---------- 223 (260)
T ss_pred Ccc-cccCCCCCcCccCHHHHccCC-CCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCC--CC----------
Confidence 322 223456788999999886544 7889999999999999999999998766555444433210 00
Q ss_pred CcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 350 NATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
.....+++++.++|.+||..||++||++.++++||||
T Consensus 224 ----------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 224 ----------------SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred ----------------CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 0112567789999999999999999999999999997
No 355
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=7.6e-40 Score=305.20 Aligned_cols=238 Identities=20% Similarity=0.263 Sum_probs=185.5
Q ss_pred eeccCCceEEEEEEEccC------------------------CcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCee
Q 015455 123 KIGQGTYSNVYKAKDMLT------------------------GKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVI 178 (406)
Q Consensus 123 ~lg~G~~g~Vy~~~~~~~------------------------~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 178 (406)
.||+|+||.||+|....+ ...||+|.+.... ......+.+|+.+++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHHHHHHHHhcCCCCCee
Confidence 699999999999974322 2368889875432 23345677799999999999999
Q ss_pred eEeeeeeecCCceEEEEEecccccHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCC---
Q 015455 179 KLEGLVTSRMSCSLYLVFHYMEHDLAGLAA-SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDG--- 254 (406)
Q Consensus 179 ~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~-~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~--- 254 (406)
++++++... ...++||||++++.+..+. .....+++..+..++.||+.||+|||+.||+||||||+|||++..+
T Consensus 80 ~~~~~~~~~--~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 80 FVHGVCVRG--SENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred eEEEEEEeC--CceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence 999998874 4589999999987665444 4456789999999999999999999999999999999999997644
Q ss_pred ----cEEEeeeccccccCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHH-hCCCCCCCCChHHHHH
Q 015455 255 ----VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELL-AGKPIMPGRTEVEQLH 329 (406)
Q Consensus 255 ----~~kl~DFgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell-~g~~pf~~~~~~~~~~ 329 (406)
.++++|||++...... ....++..|+|||.+.+...++.++|||||||++|||+ +|..||.+....+...
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~ 232 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKER 232 (274)
T ss_pred CccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHH
Confidence 4899999988654221 22356788999998876555899999999999999995 7999998766544322
Q ss_pred HHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 330 KIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 330 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
.. .... .. ....++.+.++|.+||+.||.+|||+.++|++
T Consensus 233 ~~-~~~~----------~~-------------------~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 233 FY-EKKH----------RL-------------------PEPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HH-Hhcc----------CC-------------------CCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 21 1100 00 01245678999999999999999999999874
No 356
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-41 Score=300.49 Aligned_cols=283 Identities=31% Similarity=0.540 Sum_probs=228.5
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCC----ce
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMS----CS 191 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~----~~ 191 (406)
.+|.-+..+|.|.- .|..+-+...+++||+|++..........++..+|...+..++|+|+++++.+|+.+.. ..
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 57888899999998 77788888999999999986654444445667789999999999999999999875322 24
Q ss_pred EEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC
Q 015455 192 LYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 192 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~ 271 (406)
+|+|||+|..++...... .+.-..+..++.|++.|+.|||+.||+||||||+||++..++.+||.|||+|..-+..
T Consensus 96 ~y~v~e~m~~nl~~vi~~---elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~- 171 (369)
T KOG0665|consen 96 VYLVMELMDANLCQVILM---ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD- 171 (369)
T ss_pred HHHHHHhhhhHHHHHHHH---hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcc-
Confidence 799999999998887663 5677889999999999999999999999999999999999999999999999876544
Q ss_pred CCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCc
Q 015455 272 KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351 (406)
Q Consensus 272 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 351 (406)
-..+.++.|..|+|||++.+.. |...+||||+||++.||++|...|+|.+..++..++.+.+|+|...+.....-...
T Consensus 172 -~~mtpyVvtRyyrapevil~~~-~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r 249 (369)
T KOG0665|consen 172 -FMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVR 249 (369)
T ss_pred -cccCchhheeeccCchheeccC-CcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHH
Confidence 3467789999999999999876 99999999999999999999999999999999999999999999876544221100
Q ss_pred ccCCCCCchh-hhhhhhcC------------CCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 352 TLFKPREPYK-RCIQETFK------------DFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 352 ~~~~~~~~~~-~~~~~~~~------------~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
....+...+. ....+.++ .-+..+++++.+||..||++|.++.++|+||||+-|
T Consensus 250 ~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~vw 316 (369)
T KOG0665|consen 250 NYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKVW 316 (369)
T ss_pred HHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeeee
Confidence 0000000000 00111111 112347999999999999999999999999999844
No 357
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=7.4e-40 Score=303.24 Aligned_cols=239 Identities=18% Similarity=0.250 Sum_probs=185.1
Q ss_pred eeeccCCceEEEEEEEcc------------CCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCC
Q 015455 122 DKIGQGTYSNVYKAKDML------------TGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMS 189 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~------------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~ 189 (406)
+.||+|+||.||+|+... ....||+|.+.... ......+..|+.++..++||||+++++++...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~-- 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVRD-- 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC--
Confidence 368999999999997432 22368888865432 33345677789999999999999999998764
Q ss_pred ceEEEEEecccccHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCc-------EEEeee
Q 015455 190 CSLYLVFHYMEHDLAGLAA-SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGV-------LKIADF 261 (406)
Q Consensus 190 ~~~~lv~e~~~~~l~~~~~-~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~-------~kl~DF 261 (406)
...+++|||++++.+..+. .....+++..++.++.||+.||+|||+.+|+||||||+|||++.++. ++++||
T Consensus 77 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 77 VENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred CCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 4478999999987665444 34567999999999999999999999999999999999999987664 899999
Q ss_pred ccccccCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHhCCCCH
Q 015455 262 GLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELL-AGKPIMPGRTEVEQLHKIYKLCGSPSE 340 (406)
Q Consensus 262 gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell-~g~~pf~~~~~~~~~~~i~~~~~~~~~ 340 (406)
|++...... ....++..|+|||++.+...++.++|||||||++|+|+ +|..||......+... .....
T Consensus 157 g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~-~~~~~----- 225 (262)
T cd05077 157 GIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER-FYEGQ----- 225 (262)
T ss_pred CCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH-HHhcC-----
Confidence 998765322 23457888999998875556899999999999999998 5888887654433221 11100
Q ss_pred HHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 341 EYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
.. .....++++.+||.+||+.||.+|||+.++|++
T Consensus 226 -------~~-----------------~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 226 -------CM-----------------LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred -------cc-----------------CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 00 001234678999999999999999999999874
No 358
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.7e-39 Score=300.36 Aligned_cols=247 Identities=23% Similarity=0.317 Sum_probs=189.8
Q ss_pred eeeccCCceEEEEEEEcc---CCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEec
Q 015455 122 DKIGQGTYSNVYKAKDML---TGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHY 198 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~ 198 (406)
+.||+|+||.||+|.+.. ++..||+|.+... ........+.+|+.+++.++||||+++++++... ....+++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI-TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS-EGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc-CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecC-CCCcEEEEec
Confidence 368999999999998643 3457999987532 2334456778899999999999999999977543 3457899999
Q ss_pred cccc-HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC---CC
Q 015455 199 MEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK---HP 274 (406)
Q Consensus 199 ~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~---~~ 274 (406)
+.++ +..++.......++..+..++.|++.||+|||+.+++||||||+|||++.++.+||+|||++........ ..
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 158 (262)
T cd05058 79 MKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHN 158 (262)
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecc
Confidence 9864 5555544445678888899999999999999999999999999999999999999999999976532211 11
Q ss_pred CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
.....+++.|+|||.+.+. .++.++|||||||++|||++ |.+||...+..+....+.... .+
T Consensus 159 ~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~-~~--------------- 221 (262)
T cd05058 159 HTGAKLPVKWMALESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGR-RL--------------- 221 (262)
T ss_pred cccCcCCccccChhHhccC-ccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC-CC---------------
Confidence 1233457789999988764 48899999999999999999 567787766555444332210 00
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
.....+++.+.+++..||..||++|||+.+++..
T Consensus 222 ------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 222 ------------LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred ------------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 0012456789999999999999999999999863
No 359
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1e-39 Score=303.55 Aligned_cols=243 Identities=26% Similarity=0.357 Sum_probs=189.6
Q ss_pred eeeccCCceEEEEEEEccCCc--EEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCceEEEEEec
Q 015455 122 DKIGQGTYSNVYKAKDMLTGK--IVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLYLVFHY 198 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~ 198 (406)
+.||+|+||.||+|++..++. .+|+|.+... ........+.+|++++.++ +||||+++++++... ...|++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--~~~~lv~e~ 77 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR--GYLYLAIEY 77 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc-CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecC--CCceEEEEe
Confidence 358999999999999877776 4688877532 2344556788899999999 899999999998774 458999999
Q ss_pred cccc-HHHHhcCC---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeec
Q 015455 199 MEHD-LAGLAASP---------------EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFG 262 (406)
Q Consensus 199 ~~~~-l~~~~~~~---------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFg 262 (406)
+.++ +.+.+... ...+++..++.++.|++.||+|||+.|++||||||+|||+++++.+||+|||
T Consensus 78 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 78 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCC
Confidence 9864 44444321 1358899999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHH
Q 015455 263 LASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEE 341 (406)
Q Consensus 263 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~ 341 (406)
++........ ......+..|+|||++.+. .++.++|||||||++|||++ |..||.+.+..+....+......
T Consensus 158 l~~~~~~~~~--~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~---- 230 (270)
T cd05047 158 LSRGQEVYVK--KTMGRLPVRWMAIESLNYS-VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL---- 230 (270)
T ss_pred Cccccchhhh--ccCCCCccccCChHHHccC-CCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCC----
Confidence 9864321111 1112336679999988664 48899999999999999997 99999887766555544221000
Q ss_pred HhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 342 YWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
+....++.++.+++.+||+.||.+|||+.+++.
T Consensus 231 ------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 231 ------------------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred ------------------------CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 001245678999999999999999999999986
No 360
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-40 Score=338.23 Aligned_cols=251 Identities=23% Similarity=0.387 Sum_probs=208.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCC-----cEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCc
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTG-----KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~ 190 (406)
...++.+.||+|.||.||.|...... ..||||.+.... +......|.+|..+|+.++|||||+++|++.+ ..
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~-~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~--~~ 768 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS-SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD--SG 768 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCcceeeEEEeecC--CC
Confidence 56778899999999999999854332 249999987554 45567788899999999999999999999988 44
Q ss_pred eEEEEEecccc-cHHHHhcCC------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeecc
Q 015455 191 SLYLVFHYMEH-DLAGLAASP------EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGL 263 (406)
Q Consensus 191 ~~~lv~e~~~~-~l~~~~~~~------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgl 263 (406)
..++++|||++ +|+.++... ...++..+...++.|||+|+.||+++++|||||.+.|+||++...+||+|||+
T Consensus 769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccch
Confidence 58999999997 566666655 55789999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCcCc-cccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHH
Q 015455 264 ASFFDPNHKHPMTSR-VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEE 341 (406)
Q Consensus 264 a~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~ 341 (406)
|+.+-.......... .-...|||||.+.... ++.++|||||||+|||++| |..||++.++.+.+....+.-.-++
T Consensus 849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~i-FtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~-- 925 (1025)
T KOG1095|consen 849 ARDIYDKDYYRKHGEAMLPVKWMPPESLKDGI-FTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDP-- 925 (1025)
T ss_pred hHhhhhchheeccCccccceecCCHHHHhhcc-cccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCC--
Confidence 995533322222222 3357899999998744 9999999999999999998 8999999999998886665421111
Q ss_pred HhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 342 YWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
+..+|..+.++|..||+.+|++||++..+++
T Consensus 926 --------------------------P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 926 --------------------------PSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred --------------------------CCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 1368899999999999999999999999886
No 361
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-39 Score=312.75 Aligned_cols=252 Identities=23% Similarity=0.343 Sum_probs=199.0
Q ss_pred CCcceeeeeccCCceEEEEEEEccC-------CcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeec
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLT-------GKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSR 187 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~-------~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~ 187 (406)
.+|++.+.||+|+||.||+|++... +..||+|.+... ........+.+|+++++++ +||||+++++++...
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 5799999999999999999986432 237899987643 3344566788899999999 899999999998874
Q ss_pred CCceEEEEEeccccc-HHHHhcC---------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEc
Q 015455 188 MSCSLYLVFHYMEHD-LAGLAAS---------------PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLID 251 (406)
Q Consensus 188 ~~~~~~lv~e~~~~~-l~~~~~~---------------~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~ 251 (406)
...++++||++++ +.+++.. ....+++..+..++.||+.||.|||+.|++||||||+|||++
T Consensus 91 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~ 168 (334)
T cd05100 91 --GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVT 168 (334)
T ss_pred --CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc
Confidence 4589999999875 4444332 123578899999999999999999999999999999999999
Q ss_pred CCCcEEEeeeccccccCCCCCC-CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 015455 252 DDGVLKIADFGLASFFDPNHKH-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLH 329 (406)
Q Consensus 252 ~~~~~kl~DFgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~ 329 (406)
.++.+||+|||+++........ ......++..|+|||++.+.. ++.++|||||||++|||++ |..||.+.+..+...
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 247 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK 247 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCC-cCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 9999999999999866432211 112223456799999987654 8899999999999999998 889998887766655
Q ss_pred HHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 330 KIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 330 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
.+...... .....++..+.+||.+||+.+|.+|||+.+++++
T Consensus 248 ~~~~~~~~----------------------------~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 248 LLKEGHRM----------------------------DKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHHcCCCC----------------------------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 55321100 0112456789999999999999999999999875
No 362
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=9.9e-40 Score=319.32 Aligned_cols=253 Identities=20% Similarity=0.264 Sum_probs=198.0
Q ss_pred CCcceeeeeccCCceEEEEEEEc-----cCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCC-CCCeeeEeeeeeecCC
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDM-----LTGKIVALKKVRFDNLEPESVKFMAREILILRRLD-HPNVIKLEGLVTSRMS 189 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~l~~~~~~~~~ 189 (406)
++|.+.+.||+|+||.||+|++. .+++.||+|++..... ......+.+|+.+|.++. |||||++++++...
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~-- 113 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR-SSEKQALMSELKIMSHLGPHLNIVNLLGACTKG-- 113 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC-hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC--
Confidence 67889999999999999999853 3456899999975432 333456788999999997 99999999998874
Q ss_pred ceEEEEEecccccHH-HHhcCC----------------------------------------------------------
Q 015455 190 CSLYLVFHYMEHDLA-GLAASP---------------------------------------------------------- 210 (406)
Q Consensus 190 ~~~~lv~e~~~~~l~-~~~~~~---------------------------------------------------------- 210 (406)
...++||||+.++.+ +.+...
T Consensus 114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 458999999987543 333211
Q ss_pred ---------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEc
Q 015455 211 ---------------------------------------EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLID 251 (406)
Q Consensus 211 ---------------------------------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~ 251 (406)
...+++..+..++.||+.||.|||+.+++||||||+|||++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~ 273 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLIC 273 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEe
Confidence 12467788899999999999999999999999999999999
Q ss_pred CCCcEEEeeeccccccCCCCC-CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 015455 252 DDGVLKIADFGLASFFDPNHK-HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLH 329 (406)
Q Consensus 252 ~~~~~kl~DFgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~ 329 (406)
.++.+||+|||+++....... .......++..|+|||.+.+.. ++.++|||||||++|||++ |..||......+...
T Consensus 274 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~ 352 (401)
T cd05107 274 EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNL-YTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFY 352 (401)
T ss_pred CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCC-CCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHH
Confidence 999999999999986533221 1122345688999999887654 8899999999999999998 899998766555443
Q ss_pred HHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 330 KIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 330 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
........+ .....++.++.+||.+||..||.+||++.+++..
T Consensus 353 ~~~~~~~~~---------------------------~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 353 NAIKRGYRM---------------------------AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred HHHHcCCCC---------------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 332210000 0112567889999999999999999999999864
No 363
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.4e-39 Score=306.80 Aligned_cols=258 Identities=20% Similarity=0.288 Sum_probs=196.7
Q ss_pred CCcceeeeeccCCceEEEEEEEcc----------------CCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeee
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDML----------------TGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIK 179 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~----------------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 179 (406)
++|++.+.||+|+||.||++++.. ++..||+|.+.... .......+.+|+.+++.++|+||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-NKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcce
Confidence 579999999999999999985432 34579999986543 3344567888999999999999999
Q ss_pred EeeeeeecCCceEEEEEeccccc-HHHHhcCC----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCe
Q 015455 180 LEGLVTSRMSCSLYLVFHYMEHD-LAGLAASP----------EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNL 248 (406)
Q Consensus 180 l~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~----------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NI 248 (406)
+++++... ...+++|||+.++ +..++... ...+++..+..++.||+.||+|||+.|++|+||||+||
T Consensus 84 ~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni 161 (296)
T cd05095 84 LLAVCITS--DPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC 161 (296)
T ss_pred EEEEEecC--CccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence 99998774 4589999999864 44443321 12477889999999999999999999999999999999
Q ss_pred EEcCCCcEEEeeeccccccCCCCCCC-CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh--CCCCCCCCChH
Q 015455 249 LIDDDGVLKIADFGLASFFDPNHKHP-MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA--GKPIMPGRTEV 325 (406)
Q Consensus 249 ll~~~~~~kl~DFgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~--g~~pf~~~~~~ 325 (406)
|++.++.++|+|||++..+....... .....++..|+|||...+.. ++.++|||||||++|||++ |..||...+..
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGK-FTTASDVWAFGVTLWEILTLCKEQPYSQLSDE 240 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCC-ccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence 99999999999999998654332211 12234467899999877654 8999999999999999998 77899877665
Q ss_pred HHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 326 EQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 326 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
+......... ..... .... .....+++.+.+||..||+.||.+|||+.++++
T Consensus 241 ~~~~~~~~~~--------~~~~~---~~~~----------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 241 QVIENTGEFF--------RDQGR---QVYL----------PKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHHHH--------hhccc---cccC----------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 5544332211 00000 0000 011246678999999999999999999999875
No 364
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.9e-39 Score=306.94 Aligned_cols=251 Identities=21% Similarity=0.303 Sum_probs=198.0
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCc----EEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCce
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGK----IVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS 191 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~ 191 (406)
++|+..+.||+|+||.||+|.+..+|. .||+|.+.... .......+.+|+.+++.++||||+++++++... .
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~---~ 82 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP---T 82 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC---C
Confidence 679999999999999999999877776 57888876443 233344677899999999999999999988653 3
Q ss_pred EEEEEecccc-cHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 192 LYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 192 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
.+++++|+++ ++.+.+......+++..+..++.|++.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus 83 ~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~ 162 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 162 (303)
T ss_pred ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCc
Confidence 5789999986 566665555557899999999999999999999999999999999999999999999999999876533
Q ss_pred CCC-CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCC
Q 015455 271 HKH-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348 (406)
Q Consensus 271 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 348 (406)
... ......++..|+|||++.+.. ++.++|||||||++|||++ |..||.+....+....+ .....++
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~--------- 231 (303)
T cd05110 163 EKEYNADGGKMPIKWMALECIHYRK-FTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL-EKGERLP--------- 231 (303)
T ss_pred ccccccCCCccccccCCHHHhccCC-CChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HCCCCCC---------
Confidence 221 122334577899999887644 8999999999999999997 99999876544433322 2110000
Q ss_pred CCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 349 PNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
..+..+..+.++|..|+..||++|||+.++++.
T Consensus 232 ------------------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 232 ------------------QPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred ------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 012356678999999999999999999998763
No 365
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=5.7e-40 Score=303.15 Aligned_cols=239 Identities=17% Similarity=0.234 Sum_probs=186.4
Q ss_pred eeeccCCceEEEEEEEccCCc-------EEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 122 DKIGQGTYSNVYKAKDMLTGK-------IVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~-------~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
+.||+|+||.||+|.+...+. .||+|.+.... ....+.+..|+.+++.++|||++++++++... ...++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~--~~~~l 76 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVCG--DESIM 76 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEeC--CCcEE
Confidence 368999999999998755443 48888875432 33345677899999999999999999998874 34899
Q ss_pred EEecccccHH-HHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCc--------EEEeeecccc
Q 015455 195 VFHYMEHDLA-GLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGV--------LKIADFGLAS 265 (406)
Q Consensus 195 v~e~~~~~l~-~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~--------~kl~DFgla~ 265 (406)
||||+.++.+ ..+......+++..+..++.||+.||+|||+.||+||||||+|||++.++. ++++|||++.
T Consensus 77 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 77 VQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred EEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 9999988655 444455557899999999999999999999999999999999999987765 6999999887
Q ss_pred ccCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCC-CCCCCCChHHHHHHHHHHhCCCCHHHhh
Q 015455 266 FFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPSEEYWK 344 (406)
Q Consensus 266 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~-~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 344 (406)
..... ....++..|+|||++.+...++.++|||||||++|+|++|. +||...+....... ....
T Consensus 157 ~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~-~~~~--------- 221 (258)
T cd05078 157 TVLPK-----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQF-YEDR--------- 221 (258)
T ss_pred ccCCc-----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHH-HHcc---------
Confidence 55322 23467889999999876555889999999999999999995 66665544433221 1100
Q ss_pred hcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 345 KSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
.. .....+.++.+||.+||+.||.+|||+.++++.
T Consensus 222 -~~-------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 222 -HQ-------------------LPAPKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred -cc-------------------CCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 00 011345678999999999999999999999864
No 366
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-39 Score=302.58 Aligned_cols=281 Identities=26% Similarity=0.389 Sum_probs=218.5
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCC--------CCCeeeEeeeeee-
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD--------HPNVIKLEGLVTS- 186 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~--------h~~iv~l~~~~~~- 186 (406)
.+|.+.++||.|-|++||+|.+..+.+.||+|+.+.. +...+....|+.+|++++ ..+||+|++.|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA---qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs 154 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA---QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS 154 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh---hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence 6899999999999999999999999999999998743 344566678999999883 3689999999964
Q ss_pred -cCCceEEEEEecccccHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCCeEEcCCC---------
Q 015455 187 -RMSCSLYLVFHYMEHDLAGLAASPE-VKFTEPQVKCYMHQLLSGLEHCHNN-GVLHRDIKGSNLLIDDDG--------- 254 (406)
Q Consensus 187 -~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~--------- 254 (406)
..+.+++||+|+++..|+.++...+ ..++...++.|++||+.||.|||.. ||||.||||+|||+..+.
T Consensus 155 GpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e~~~~~~~~~ 234 (590)
T KOG1290|consen 155 GPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTEIDPAKDARE 234 (590)
T ss_pred CCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeeccccchhhhhhh
Confidence 4567899999999999999886544 5699999999999999999999975 999999999999983110
Q ss_pred --------------------------------------------------------------------------------
Q 015455 255 -------------------------------------------------------------------------------- 254 (406)
Q Consensus 255 -------------------------------------------------------------------------------- 254 (406)
T Consensus 235 a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~~~ 314 (590)
T KOG1290|consen 235 AGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGNES 314 (590)
T ss_pred hccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCcccc
Confidence
Q ss_pred -----------------------------------------------------------------------------cEE
Q 015455 255 -----------------------------------------------------------------------------VLK 257 (406)
Q Consensus 255 -----------------------------------------------------------------------------~~k 257 (406)
++|
T Consensus 315 ~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~vK 394 (590)
T KOG1290|consen 315 TVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIRVK 394 (590)
T ss_pred chhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCccceeEE
Confidence 134
Q ss_pred EeeeccccccCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCC------ChHHHHHHH
Q 015455 258 IADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGR------TEVEQLHKI 331 (406)
Q Consensus 258 l~DFgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~------~~~~~~~~i 331 (406)
|+|||-|+.... ..+.-+.|..|+|||++.|.. |+..+||||++|++|||+||..+|.-. .+.+.++.|
T Consensus 395 IaDlGNACW~~k----hFT~DIQTRQYRapEVllGsg-Y~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i 469 (590)
T KOG1290|consen 395 IADLGNACWVHK----HFTEDIQTRQYRAPEVLLGSG-YSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALI 469 (590)
T ss_pred Eeeccchhhhhh----hhchhhhhhhccCcceeecCC-CCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHH
Confidence 455554444321 123345688899999999976 999999999999999999999999543 367889999
Q ss_pred HHHhCCCCHHHhhhcCCCC-----------cccCCCCCchhhhhhhhcC---CCCCChHHHHHHcccCCCCCCcCHHHHh
Q 015455 332 YKLCGSPSEEYWKKSKLPN-----------ATLFKPREPYKRCIQETFK---DFPPSSLPLIETLLAIDPAERLTATVAL 397 (406)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~Rpta~elL 397 (406)
++++|..|.......+... .....+...++-+ .+... .-..++.+|+.-||+.+|++||||.++|
T Consensus 470 ~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL-~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl 548 (590)
T KOG1290|consen 470 MELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVL-IEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCL 548 (590)
T ss_pred HHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHH-HHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHh
Confidence 9999999987665554332 2222222222221 11111 1234578999999999999999999999
Q ss_pred cCcccccc
Q 015455 398 NSEVSYQF 405 (406)
Q Consensus 398 ~h~~f~~~ 405 (406)
+||||+.+
T Consensus 549 ~hPwLn~~ 556 (590)
T KOG1290|consen 549 KHPWLNPV 556 (590)
T ss_pred cCccccCC
Confidence 99999864
No 367
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.2e-39 Score=301.34 Aligned_cols=253 Identities=20% Similarity=0.280 Sum_probs=197.9
Q ss_pred cceeeeeccCCceEEEEEEEc---cCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCC----c
Q 015455 118 FEKIDKIGQGTYSNVYKAKDM---LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMS----C 190 (406)
Q Consensus 118 y~~~~~lg~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~----~ 190 (406)
|.+.+.||+|+||.||+|... .+++.||||.+..........+.+.+|+.+++.++||||+++++++..... .
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567889999999999999854 357899999997665555566778899999999999999999998765322 2
Q ss_pred eEEEEEecccccHHH-Hhc-----CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccc
Q 015455 191 SLYLVFHYMEHDLAG-LAA-----SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA 264 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~-~~~-----~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla 264 (406)
..+++++|+.++.+. .+. .....+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||++
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence 347888999865443 322 12235789999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCC-CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 015455 265 SFFDPNHKH-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEY 342 (406)
Q Consensus 265 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 342 (406)
+........ ......+++.|++||.+.+.. ++.++|||||||++|+|++ |++||.+.+..+....+..... .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~-~---- 234 (273)
T cd05074 161 KKIYSGDYYRQGCASKLPVKWLALESLADNV-YTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNR-L---- 234 (273)
T ss_pred ccccCCcceecCCCccCchhhcCHhHHhcCc-cchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCc-C----
Confidence 876433211 112234567899999887654 8889999999999999999 8999988776655444432100 0
Q ss_pred hhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 343 WKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
......++.+.+++..||+.+|.+|||+.++++.
T Consensus 235 -----------------------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 235 -----------------------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred -----------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0012467789999999999999999999999864
No 368
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=1.7e-39 Score=329.12 Aligned_cols=276 Identities=22% Similarity=0.285 Sum_probs=182.7
Q ss_pred ccCCcceeeeeccCCceEEEEEEEccC----CcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeee----
Q 015455 114 RADSFEKIDKIGQGTYSNVYKAKDMLT----GKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVT---- 185 (406)
Q Consensus 114 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~----~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~---- 185 (406)
..++|++.+.||+|+||.||+|++..+ +..||+|++..... .+....+ .+....+.+++.+...+.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~----~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~ 203 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA----VEIWMNE--RVRRACPNSCADFVYGFLEPVS 203 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch----hHHHHHH--HHHhhchhhHHHHHHhhhcccc
Confidence 457899999999999999999999888 89999998753221 1111111 122222233332222111
Q ss_pred ecCCceEEEEEecccccHH-HHhcCCCC-------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 015455 186 SRMSCSLYLVFHYMEHDLA-GLAASPEV-------------------KFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKG 245 (406)
Q Consensus 186 ~~~~~~~~lv~e~~~~~l~-~~~~~~~~-------------------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp 245 (406)
......+++++||++++.+ +.+..... ......+..++.||+.||.|||+.+|+||||||
T Consensus 204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP 283 (566)
T PLN03225 204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKP 283 (566)
T ss_pred cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCH
Confidence 1234568999999987644 33332211 122445678999999999999999999999999
Q ss_pred CCeEEcC-CCcEEEeeeccccccCCCCCCCCcCccccCcccccccccCCc---------------------cCCCccchH
Q 015455 246 SNLLIDD-DGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT---------------------DYGVGVDLW 303 (406)
Q Consensus 246 ~NIll~~-~~~~kl~DFgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------------------~~~~~~Dvw 303 (406)
+|||++. ++.+||+|||+|+.+............+++.|+|||.+.... .++.++|||
T Consensus 284 ~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVw 363 (566)
T PLN03225 284 QNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIY 363 (566)
T ss_pred HHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccH
Confidence 9999985 589999999999876544444445678899999999764221 134567999
Q ss_pred HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcc
Q 015455 304 SAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLL 383 (406)
Q Consensus 304 slGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 383 (406)
||||+||||+++..+ ..+....+..+....+..... |.....+. ....... ..+.....+....+||.+||
T Consensus 364 SlGviL~el~~~~~~--~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-----~~~~~~~-~~~~~d~~~~~~~dLi~~mL 434 (566)
T PLN03225 364 SAGLIFLQMAFPNLR--SDSNLIQFNRQLKRNDYDLVA-WRKLVEPR-----ASPDLRR-GFEVLDLDGGAGWELLKSMM 434 (566)
T ss_pred HHHHHHHHHHhCcCC--CchHHHHHHHHHHhcCCcHHH-HHHhhccc-----cchhhhh-hhhhccccchHHHHHHHHHc
Confidence 999999999986544 444444555555444333222 21111000 0000000 01111223345679999999
Q ss_pred cCCCCCCcCHHHHhcCccccc
Q 015455 384 AIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 384 ~~dP~~Rpta~elL~h~~f~~ 404 (406)
++||++|||+.++|+||||+.
T Consensus 435 ~~dP~kR~ta~e~L~Hpff~~ 455 (566)
T PLN03225 435 RFKGRQRISAKAALAHPYFDR 455 (566)
T ss_pred cCCcccCCCHHHHhCCcCcCC
Confidence 999999999999999999975
No 369
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=5.2e-39 Score=302.66 Aligned_cols=258 Identities=20% Similarity=0.180 Sum_probs=189.3
Q ss_pred CCcceeeeeccCCceEEEEEEEccC---CcEEEEEEEecCCCCh--HH-------HHHHHHHHHHHhhCCCCCeeeEeee
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLT---GKIVALKKVRFDNLEP--ES-------VKFMAREILILRRLDHPNVIKLEGL 183 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~--~~-------~~~~~~E~~~l~~l~h~~iv~l~~~ 183 (406)
++|++.+.||+|+||.||+|++..+ +..+|+|+........ +. ......+...+..++|++++++++.
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 6899999999999999999998776 6677877654332110 00 0112234445667799999999987
Q ss_pred eeecCC--ceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeee
Q 015455 184 VTSRMS--CSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADF 261 (406)
Q Consensus 184 ~~~~~~--~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DF 261 (406)
...... .+.+++++++..++...+.. ....++..++.++.|++.||+|||+.+|+||||||+|||++.++.++|+||
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DF 170 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVENTKEIFKR-IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDY 170 (294)
T ss_pred eeEecCCceEEEEEEehhccCHHHHHHh-hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEc
Confidence 654322 24578888887776655433 234688899999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCC------CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH-
Q 015455 262 GLASFFDPNHKH------PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL- 334 (406)
Q Consensus 262 gla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~- 334 (406)
|+|+.+...... ......||+.|+|||++.+.. ++.++|||||||++|||++|..||.+...........+.
T Consensus 171 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~-~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~ 249 (294)
T PHA02882 171 GIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGAC-VTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCD 249 (294)
T ss_pred CCceeeccCCcccccccccccccCCCccccCHHHhCCCC-CCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHH
Confidence 999876432211 122346899999999887654 899999999999999999999999887433222111110
Q ss_pred -hCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 335 -CGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 335 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
...... . ....+..++.+.++++.|+..+|.+||+..++++
T Consensus 250 ~~~~~~~-----~------------------~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 250 FIKRLHE-----G------------------KIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HHHHhhh-----h------------------hhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 000000 0 0012356788999999999999999999999875
No 370
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.5e-39 Score=300.60 Aligned_cols=251 Identities=22% Similarity=0.297 Sum_probs=187.8
Q ss_pred eeeccCCceEEEEEEEcc--CCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEecc
Q 015455 122 DKIGQGTYSNVYKAKDML--TGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYM 199 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~ 199 (406)
+.||+|+||.||+|.... ....+|+|.+.... .......+.+|+.+++.++|+||+++++.+... ...|++|||+
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~--~~~~lv~e~~ 77 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA-TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIES--IPYLLVLEFC 77 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC-ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCC--CceEEEEEeC
Confidence 368999999999996432 34578888775433 334445677899999999999999999988764 4589999999
Q ss_pred cccHH-HHhcCCC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC-C
Q 015455 200 EHDLA-GLAASPE----VKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK-H 273 (406)
Q Consensus 200 ~~~l~-~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~-~ 273 (406)
+++.+ +.+.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++........ .
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 78 PLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred CCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 87544 4443322 2356888899999999999999999999999999999999999999999999875432211 1
Q ss_pred CCcCccccCcccccccccC------CccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhc
Q 015455 274 PMTSRVVTLWYRPPELLLG------ATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS 346 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~------~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 346 (406)
......++..|+|||++.. ...++.++|||||||++|||++ |..||....+.+.+..+........
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~------- 230 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKL------- 230 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccC-------
Confidence 1123345778999998742 2346789999999999999999 7889988777666555543211110
Q ss_pred CCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 347 KLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
+. ......+++.+.+++..|+ .||.+|||++++++-
T Consensus 231 --~~--------------~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~ 266 (269)
T cd05042 231 --PK--------------PQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHEL 266 (269)
T ss_pred --CC--------------CcccccCCHHHHHHHHHHh-cCcccccCHHHHHHH
Confidence 00 0011256777888999998 599999999999863
No 371
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=4.5e-39 Score=298.73 Aligned_cols=251 Identities=25% Similarity=0.429 Sum_probs=201.7
Q ss_pred CcceeeeeccCCceEEEEEEEcc-CCcEEEEEEEecCC--------CChHHHHHHHHHHHHHhh-CCCCCeeeEeeeeee
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDML-TGKIVALKKVRFDN--------LEPESVKFMAREILILRR-LDHPNVIKLEGLVTS 186 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~--------~~~~~~~~~~~E~~~l~~-l~h~~iv~l~~~~~~ 186 (406)
.|++.+.||+|+||.||+|++.. +++.+|+|.+.... ........+.+|+.++.. ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47889999999999999999877 67899999886432 123344566778888875 799999999999877
Q ss_pred cCCceEEEEEeccccc-HHHHh---cCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCCeEEcCCCcEEEeee
Q 015455 187 RMSCSLYLVFHYMEHD-LAGLA---ASPEVKFTEPQVKCYMHQLLSGLEHCHN-NGVLHRDIKGSNLLIDDDGVLKIADF 261 (406)
Q Consensus 187 ~~~~~~~lv~e~~~~~-l~~~~---~~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DF 261 (406)
....+++|||++++ +.+.+ ......+++..++.++.|++.||.|||+ .+++|+||+|+|||++.++.++|+||
T Consensus 81 --~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 --NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred --CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecc
Confidence 45699999999874 44433 2345579999999999999999999996 68999999999999999999999999
Q ss_pred ccccccCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 015455 262 GLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 341 (406)
Q Consensus 262 gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 341 (406)
|++....... ......++..|+|||.+.+.. ++.++|+||||+++|+|++|++||...+.......+......+..
T Consensus 159 g~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~-~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~- 234 (269)
T cd08528 159 GLAKQKQPES--KLTSVVGTILYSCPEIVKNEP-YGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLP- 234 (269)
T ss_pred cceeeccccc--ccccccCcccCcChhhhcCCC-CchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCC-
Confidence 9998765433 234567899999999987654 899999999999999999999999877666555554432211100
Q ss_pred HhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 342 YWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
...+++.+.++|.+||+.||.+|||+.|+.++
T Consensus 235 --------------------------~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 235 --------------------------EGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred --------------------------cccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 02467789999999999999999999998764
No 372
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-42 Score=297.75 Aligned_cols=262 Identities=23% Similarity=0.351 Sum_probs=208.8
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhh-CCCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRR-LDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
++.+-+..||.|+||+|++..++.+|+..|||.++......+ ..+++.|.+...+ -++||||+++|.+..+.. .|+
T Consensus 64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~ke-q~rll~e~d~~mks~~cp~IVkfyGa~F~EGd--cWi 140 (361)
T KOG1006|consen 64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKE-QKRLLMEHDTVMKSSNCPNIVKFYGALFSEGD--CWI 140 (361)
T ss_pred chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHH-HHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCc--eee
Confidence 567778899999999999999999999999999998765444 4556667776554 489999999998877444 899
Q ss_pred EEecccccHHHHh----cCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCCeEEcCCCcEEEeeeccccccCC
Q 015455 195 VFHYMEHDLAGLA----ASPEVKFTEPQVKCYMHQLLSGLEHCHNN-GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDP 269 (406)
Q Consensus 195 v~e~~~~~l~~~~----~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~ 269 (406)
.||.|+-++..++ .-.+..++|..+-.+...++.||.||-.. .|||||+||+|||++..|.+||||||.+-.+..
T Consensus 141 CMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~ 220 (361)
T KOG1006|consen 141 CMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD 220 (361)
T ss_pred eHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHH
Confidence 9999998776543 23455899999999999999999999975 999999999999999999999999999987743
Q ss_pred CCCCCCcCccccCcccccccccCCc-cCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH-hCCCCHHHhhhcC
Q 015455 270 NHKHPMTSRVVTLWYRPPELLLGAT-DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL-CGSPSEEYWKKSK 347 (406)
Q Consensus 270 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~ 347 (406)
+-. .+.-+|-..|||||.+.... .|+.+|||||||++|||++||+.|+.+-+. ++..+... .|.|+.-.
T Consensus 221 SiA--kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--vfeql~~Vv~gdpp~l~----- 291 (361)
T KOG1006|consen 221 SIA--KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--VFEQLCQVVIGDPPILL----- 291 (361)
T ss_pred HHH--hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--HHHHHHHHHcCCCCeec-----
Confidence 322 34457788899999996433 399999999999999999999999976443 33333333 22222100
Q ss_pred CCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 348 LPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
.....-+++..+..||..||.+|-..||...+++.+||.+.+
T Consensus 292 ----------------~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y 333 (361)
T KOG1006|consen 292 ----------------FDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMY 333 (361)
T ss_pred ----------------CcccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhh
Confidence 001112578889999999999999999999999999998754
No 373
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=6.6e-39 Score=297.81 Aligned_cols=250 Identities=21% Similarity=0.246 Sum_probs=186.9
Q ss_pred eeeccCCceEEEEEEEc--cCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEecc
Q 015455 122 DKIGQGTYSNVYKAKDM--LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYM 199 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~ 199 (406)
+.||+|+||.||+|... .++..+|+|.++.... ......+.+|+.++++++||||+++++++.+. ...++||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~ 77 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEV--TPYLLVMEFC 77 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC--CCcEEEEECC
Confidence 36899999999999754 3456799998875543 23344678899999999999999999988764 4589999999
Q ss_pred cccHH-HHhcC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC-
Q 015455 200 EHDLA-GLAAS----PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH- 273 (406)
Q Consensus 200 ~~~l~-~~~~~----~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~- 273 (406)
+++.+ +.+.. .....++..+..++.|++.||+|||+.+++||||||+||+++.+++++|+|||++.........
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 78 PLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred CCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 86544 44332 1235677888899999999999999999999999999999999999999999999754322211
Q ss_pred CCcCccccCcccccccccCCc------cCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhc
Q 015455 274 PMTSRVVTLWYRPPELLLGAT------DYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS 346 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~------~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 346 (406)
......++..|+|||++.+.. .++.++|+||||+++|||++ |..||......+...........
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~--------- 228 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQL--------- 228 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccC---------
Confidence 112345688899999885421 25789999999999999996 99999877665544332221000
Q ss_pred CCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 347 KLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
..+. .......++.+.++|+.|+ .||.+|||+.+++.
T Consensus 229 ~~~~--------------~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 229 KLPK--------------PRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred CCCC--------------CccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 0000 0001135667899999998 68999999999974
No 374
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=3.5e-39 Score=297.04 Aligned_cols=241 Identities=23% Similarity=0.413 Sum_probs=195.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|++.+.||+|+||.||++. .+++.||+|.++... ....+.+|+.+++.++|||++++++++... ..+++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~---~~~~v 76 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILHN---GLYIV 76 (254)
T ss_pred HHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC---CcEEE
Confidence 679999999999999999985 578899999986432 234677899999999999999999988653 37899
Q ss_pred Eecccc-cHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 196 FHYMEH-DLAGLAASP-EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 196 ~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
|||+.+ ++...+... ...+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||++......
T Consensus 77 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~--- 153 (254)
T cd05083 77 MELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG--- 153 (254)
T ss_pred EECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc---
Confidence 999986 555555433 346899999999999999999999999999999999999999999999999998764322
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 352 (406)
......+..|+|||.+.+.. ++.++|+|||||++|+|++ |++||...+..+....+.+....
T Consensus 154 -~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~--------------- 216 (254)
T cd05083 154 -VDNSKLPVKWTAPEALKHKK-FSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRM--------------- 216 (254)
T ss_pred -CCCCCCCceecCHHHhccCC-cCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCC---------------
Confidence 12233467899999887644 8899999999999999997 99999887766554444321100
Q ss_pred cCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.....+++.+.++|..||+.+|.+|||+.+++.
T Consensus 217 -------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 217 -------------EPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred -------------CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 001256788999999999999999999999975
No 375
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=4.2e-39 Score=300.97 Aligned_cols=257 Identities=22% Similarity=0.352 Sum_probs=199.6
Q ss_pred CCcceeeeeccCCceEEEEEEEc----cCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCce
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDM----LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS 191 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~ 191 (406)
++|++.+.||+|+||.||+|+.. .++..||+|.+...... .....+.+|+++++.++|+||+++++++.......
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~ 82 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS 82 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence 57889999999999999999854 34789999998765433 34567889999999999999999999988766667
Q ss_pred EEEEEecccc-cHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 192 LYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 192 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
.+++|||+++ ++...+......+++..+..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||++......
T Consensus 83 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05038 83 LRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPED 162 (284)
T ss_pred eEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccC
Confidence 9999999986 555555554457999999999999999999999999999999999999999999999999999877532
Q ss_pred CCCC--CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHH-----------HHHHHHHhCC
Q 015455 271 HKHP--MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQ-----------LHKIYKLCGS 337 (406)
Q Consensus 271 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~-----------~~~i~~~~~~ 337 (406)
.... .....++..|+|||.+.+.. ++.++||||||+++|||++|..||........ ...+...+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~Pe~~~~~~-~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (284)
T cd05038 163 KDYYYVKEPGESPIFWYAPECLRTSK-FSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKE 241 (284)
T ss_pred CcceeccCCCCCcccccCcHHHccCC-CCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHc
Confidence 2211 11223456799999887654 88999999999999999999999865432210 1111111000
Q ss_pred CCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 338 PSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.. . ......++.++.+|+.+||+.||.+|||+.++++
T Consensus 242 ~~-------~-----------------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 242 GE-------R-----------------LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred CC-------c-----------------CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 00 0 0001245678999999999999999999999985
No 376
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8e-41 Score=309.22 Aligned_cols=269 Identities=23% Similarity=0.356 Sum_probs=216.8
Q ss_pred cccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC-----hHHHHHHHHHHHHHhhCCCCCeeeEeeeeeec
Q 015455 113 RRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLDHPNVIKLEGLVTSR 187 (406)
Q Consensus 113 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~ 187 (406)
...++|-++..||+|||+.||+|.+....+.||+|+-..+... ....+...+|..|-+.|+||.||+++++|.-+
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD 539 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD 539 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence 3457899999999999999999999999999999986654322 23344566899999999999999999999764
Q ss_pred CCceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC--CCeeccCCCCCeEEcC---CCcEEEeeec
Q 015455 188 MSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN--GVLHRDIKGSNLLIDD---DGVLKIADFG 262 (406)
Q Consensus 188 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~--~ivHrDlkp~NIll~~---~~~~kl~DFg 262 (406)
...++.|+|||+|+.+++++.....+++.+++.|+.||+.||.||.+. .|||-||||.|||+.. -|.+||+|||
T Consensus 540 -tdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 540 -TDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred -cccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 345899999999999998888888999999999999999999999987 5999999999999953 4789999999
Q ss_pred cccccCCCCCC------CCcCccccCcccccccccC---CccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015455 263 LASFFDPNHKH------PMTSRVVTLWYRPPELLLG---ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYK 333 (406)
Q Consensus 263 la~~~~~~~~~------~~~~~~gt~~y~aPE~~~~---~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~ 333 (406)
|++.++..... .+....||.||++||.+.- .+..+.++||||+|||+|..+.|+.||....... .|++
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ---dILq 695 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ---DILQ 695 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH---HHHh
Confidence 99998644332 2345689999999999852 2447889999999999999999999997654332 2222
Q ss_pred HhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 334 LCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
....... .+..+|. -+.+++++++||+.||++--++|....++-.||||..+
T Consensus 696 eNTIlkA---tEVqFP~-----------------KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh 747 (775)
T KOG1151|consen 696 ENTILKA---TEVQFPP-----------------KPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPH 747 (775)
T ss_pred hhchhcc---eeccCCC-----------------CCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccch
Confidence 1111100 1111211 13688999999999999999999999999999999764
No 377
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3e-39 Score=299.79 Aligned_cols=245 Identities=24% Similarity=0.353 Sum_probs=192.5
Q ss_pred eeeccCCceEEEEEEEccCC------cEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 122 DKIGQGTYSNVYKAKDMLTG------KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
+.||+|+||.||+|++.... ..||+|.+.... .......+.+|+++++.++||||+++++++... ...+++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~~v 77 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA-TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLN--EPQYII 77 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc-chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCC--CCeEEE
Confidence 36899999999999875433 689999886443 223455678899999999999999999998764 458999
Q ss_pred Eeccccc-HHHHhcC------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCC-----cEEEeeecc
Q 015455 196 FHYMEHD-LAGLAAS------PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDG-----VLKIADFGL 263 (406)
Q Consensus 196 ~e~~~~~-l~~~~~~------~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-----~~kl~DFgl 263 (406)
|||++++ +...+.. ....+++..+..++.|++.||.|||+.+++|+||||+||+++.++ .++|+|||+
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 78 MELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred EeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 9999864 4444432 234588999999999999999999999999999999999999887 899999999
Q ss_pred ccccCCCCC-CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHH
Q 015455 264 ASFFDPNHK-HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEE 341 (406)
Q Consensus 264 a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~ 341 (406)
+........ .......++..|+|||++.+.. ++.++|||||||++|+|++ |..||...+..+....+..... +
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~-~--- 232 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGK-FTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGR-L--- 232 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCC-cccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCc-c---
Confidence 976543221 1122334578899999887654 8999999999999999998 9999988777665554422100 0
Q ss_pred HhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 342 YWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.....+|+.+.+||.+||..+|.+|||+.++++
T Consensus 233 ------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 233 ------------------------QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred ------------------------CCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 011356778999999999999999999999875
No 378
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=4.2e-39 Score=296.85 Aligned_cols=236 Identities=21% Similarity=0.287 Sum_probs=185.2
Q ss_pred eeeccCCceEEEEEEEccCC----------cEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCce
Q 015455 122 DKIGQGTYSNVYKAKDMLTG----------KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS 191 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~----------~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~ 191 (406)
+.||+|+||.||+|.+..++ ..+++|.+..... ....+.+|+.+++.++||||+++++++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR---DSLAFFETASLMSQLSHKHLVKLYGVCVR---DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh---hHHHHHHHHHHHHcCCCcchhheeeEEec---CC
Confidence 36899999999999987666 3578887654331 14667789999999999999999998876 23
Q ss_pred EEEEEecccccHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCC-------cEEEeeecc
Q 015455 192 LYLVFHYMEHDLAGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDG-------VLKIADFGL 263 (406)
Q Consensus 192 ~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-------~~kl~DFgl 263 (406)
.+++|||+.++.+..+.. ....+++..+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 789999999866654443 333789999999999999999999999999999999999999887 799999999
Q ss_pred ccccCCCCCCCCcCccccCcccccccccCC-ccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHH
Q 015455 264 ASFFDPNHKHPMTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEE 341 (406)
Q Consensus 264 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~ 341 (406)
+..... .....++..|+|||++.+. ..++.++|||||||++|+|++ |..||...+..+....... .
T Consensus 155 a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~-~------ 222 (259)
T cd05037 155 PITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQD-Q------ 222 (259)
T ss_pred cccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhc-C------
Confidence 987543 1234567789999998765 358899999999999999999 5778876653332221110 0
Q ss_pred HhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 342 YWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
...+ ......+.++|.+||..||.+|||+.++++
T Consensus 223 ----~~~~-------------------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 223 ----HRLP-------------------MPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred ----CCCC-------------------CCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0000 011267899999999999999999999986
No 379
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=1.2e-39 Score=297.26 Aligned_cols=229 Identities=26% Similarity=0.316 Sum_probs=181.9
Q ss_pred CCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEecccccHHHH
Q 015455 127 GTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGL 206 (406)
Q Consensus 127 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~~l~~~ 206 (406)
|.||+||++++..+++.||+|.++... ...+|...+....||||+++++++... ...+++|||++++.+..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~ 74 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVSE--DSVFLVLQHAEGGKLWS 74 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheecC--CeEEEEEecCCCCCHHH
Confidence 899999999999999999999987543 122345555566799999999988764 56999999999755443
Q ss_pred hcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCccccCcccc
Q 015455 207 AASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRP 286 (406)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~gt~~y~a 286 (406)
.......+++..+..++.|++.||.|||+.|++||||||+||+++.++.++++|||++...... .....++..|+|
T Consensus 75 ~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~y~a 150 (237)
T cd05576 75 HISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVENMYCA 150 (237)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCccccC
Confidence 3333446999999999999999999999999999999999999999999999999988765432 223455778999
Q ss_pred cccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhh
Q 015455 287 PELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQE 366 (406)
Q Consensus 287 PE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (406)
||.+.+.. ++.++|+||+|+++|+|++|+.||...... +.. ... ..
T Consensus 151 PE~~~~~~-~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~~~----------------~~~------------~~ 196 (237)
T cd05576 151 PEVGGISE-ETEACDWWSLGAILFELLTGKTLVECHPSG-----INT----------------HTT------------LN 196 (237)
T ss_pred CcccCCCC-CCchhhHHHHHHHHHHHHHCcchhhcCchh-----ccc----------------ccc------------cC
Confidence 99886543 889999999999999999999887532110 000 000 01
Q ss_pred hcCCCCCChHHHHHHcccCCCCCCcCH-----HHHhcCccc
Q 015455 367 TFKDFPPSSLPLIETLLAIDPAERLTA-----TVALNSEVS 402 (406)
Q Consensus 367 ~~~~~~~~~~~li~~~L~~dP~~Rpta-----~elL~h~~f 402 (406)
..+.+++.+.++|.+||+.||++|||+ +++++||||
T Consensus 197 ~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 197 IPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred CcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 113567889999999999999999996 999999997
No 380
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-40 Score=313.69 Aligned_cols=248 Identities=23% Similarity=0.393 Sum_probs=208.1
Q ss_pred cceeeeeccCCceEEEEEEEcc--CC--cEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEE
Q 015455 118 FEKIDKIGQGTYSNVYKAKDML--TG--KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 118 y~~~~~lg~G~~g~Vy~~~~~~--~~--~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~ 193 (406)
..+.+.||.|.||.||.|.... .| -.||||..+.+. +.+..+.|+.|..+|+.++|||||+++|+|.+. ..|
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~-t~d~tekflqEa~iMrnfdHphIikLIGv~~e~---P~W 466 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC-TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ---PMW 466 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC-ChhhHHHHHHHHHHHHhCCCcchhheeeeeecc---cee
Confidence 3345689999999999997432 23 368999887654 455578899999999999999999999999874 389
Q ss_pred EEEecccc-cHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC
Q 015455 194 LVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK 272 (406)
Q Consensus 194 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~ 272 (406)
+|||.+.- .|..++..+...++......++.||..||+|||+.++|||||...|||+....-+||+||||++.+.....
T Consensus 467 ivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~y 546 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAY 546 (974)
T ss_pred EEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccch
Confidence 99999985 55667777778999999999999999999999999999999999999999999999999999999875554
Q ss_pred CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCc
Q 015455 273 HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351 (406)
Q Consensus 273 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 351 (406)
...+...-..-|||||.+.-.. ++.+||||.|||++||++. |..||.|..+.+.+..|.+.-..|..
T Consensus 547 YkaS~~kLPIKWmaPESINfRr-FTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P----------- 614 (974)
T KOG4257|consen 547 YKASRGKLPIKWMAPESINFRR-FTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCP----------- 614 (974)
T ss_pred hhccccccceeecCccccchhc-ccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCC-----------
Confidence 4334334477899999887544 9999999999999999876 99999999988887777654333322
Q ss_pred ccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 352 TLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
+.+|+.+..|+.+||++||.+||+..++..
T Consensus 615 -----------------~nCPp~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 615 -----------------PNCPPALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred -----------------CCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence 479999999999999999999999887753
No 381
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-40 Score=323.97 Aligned_cols=251 Identities=23% Similarity=0.375 Sum_probs=218.6
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCc---EEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~ 192 (406)
....+.++||.|.||.|+.|+.+..|+ .||||.++... .......|+.|+.||.+++||||++|.|+++.. ..+
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy-tekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks--~Pv 705 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKS--KPV 705 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc-cHHHHhhhhhhhhhcccCCCCcEEEEEEEEecC--cee
Confidence 456788999999999999999876664 79999997554 556677888999999999999999999999874 458
Q ss_pred EEEEecccccHH-HHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC
Q 015455 193 YLVFHYMEHDLA-GLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 193 ~lv~e~~~~~l~-~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~ 271 (406)
.|++|||+.+.+ .++..+++.|+.-+...+++.|+.||.||-+.|+|||||.+.||||+.+-.+|++||||++.+..+.
T Consensus 706 MIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~ 785 (996)
T KOG0196|consen 706 MIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 785 (996)
T ss_pred EEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCC
Confidence 999999997554 4667778899999999999999999999999999999999999999999999999999999886555
Q ss_pred CCCCcCccc--cCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCC
Q 015455 272 KHPMTSRVV--TLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348 (406)
Q Consensus 272 ~~~~~~~~g--t~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 348 (406)
....++.-| ..+|.|||.+.-.. ++.+|||||+||+|||.++ |..||...++++.++.|.+..+-|+.
T Consensus 786 ~~~ytt~GGKIPiRWTAPEAIa~RK-FTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpP-------- 856 (996)
T KOG0196|consen 786 EAAYTTLGGKIPIRWTAPEAIAYRK-FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPP-------- 856 (996)
T ss_pred CccccccCCccceeecChhHhhhcc-cCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCC--------
Confidence 333333333 78899999987544 9999999999999999765 99999999999999999987776654
Q ss_pred CCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 349 PNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.++|..+.+|+..|+++|-.+||++.++++
T Consensus 857 --------------------mDCP~aL~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 857 --------------------MDCPAALYQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred --------------------CCCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 378999999999999999999999999876
No 382
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=4.5e-38 Score=292.17 Aligned_cols=250 Identities=18% Similarity=0.255 Sum_probs=186.0
Q ss_pred eeeccCCceEEEEEEEccCC--cEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEecc
Q 015455 122 DKIGQGTYSNVYKAKDMLTG--KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYM 199 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~ 199 (406)
+.||+|+||.||+|+...++ ..+++|.+.... .....+.+.+|+.+++.++||||+++++.+... ...|++|||+
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~--~~~~lv~e~~ 77 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANA-SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEA--IPYLLVFEYC 77 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCC-ChHHHHHHHHHHHHHhccCCcchhheEEEecCC--CccEEEEecC
Confidence 36999999999999753332 356677665443 233456788899999999999999999998864 4589999999
Q ss_pred cccH-HHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC-CCC
Q 015455 200 EHDL-AGLAASP---EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH-KHP 274 (406)
Q Consensus 200 ~~~l-~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~-~~~ 274 (406)
.++. ...+... ...+++..++.++.||+.||+|||+.+++||||||+|||++.++.++|+|||++....... ...
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 78 ELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred CCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 9754 4444322 2356778889999999999999999999999999999999999999999999986432111 111
Q ss_pred CcCccccCcccccccccCC------ccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcC
Q 015455 275 MTSRVVTLWYRPPELLLGA------TDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347 (406)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~------~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 347 (406)
.....++..|+|||++... ..++.++|||||||++|||++ |..||...+..+.+..+.......
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~--------- 228 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVK--------- 228 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccc---------
Confidence 2345678899999987431 235779999999999999997 577888777766666554321100
Q ss_pred CCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 348 LPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.+. ......+++.+.+++..|+ .||.+|||+.++++
T Consensus 229 ~~~--------------~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 229 LFK--------------PQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred cCC--------------CccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 000 0011246677899999999 68999999999975
No 383
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-39 Score=315.43 Aligned_cols=252 Identities=23% Similarity=0.339 Sum_probs=212.1
Q ss_pred CCcceeeeeccCCceEEEEEEEcc-CCc--EEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDML-TGK--IVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~-~~~--~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~ 192 (406)
++..+.++||+|+||+|++|.+.. +|+ .||||.++.+.... ....|++|+.+|.+|+|+|+++|||++.++ .+
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~q---p~ 185 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLDQ---PA 185 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeeccc---hh
Confidence 567888999999999999998653 343 78999998776654 577899999999999999999999999873 37
Q ss_pred EEEEecccc-cHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 193 YLVFHYMEH-DLAGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 193 ~lv~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
.||||++.. +|++.+.. ....|.......|+.||+.||.||.++++|||||...|+||-....|||+||||.+-++.+
T Consensus 186 mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred hHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 899999986 56665544 5678999999999999999999999999999999999999999999999999999998876
Q ss_pred CCCCCc--CccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcC
Q 015455 271 HKHPMT--SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347 (406)
Q Consensus 271 ~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 347 (406)
...... .....+.|+|||.+.... ++.++|||+|||++|||++ |..||.|....+++++|-+....+
T Consensus 266 ed~Yvm~p~rkvPfAWCaPEsLrh~k-FShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLp--------- 335 (1039)
T KOG0199|consen 266 EDMYVMAPQRKVPFAWCAPESLRHRK-FSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLP--------- 335 (1039)
T ss_pred CcceEecCCCcCcccccCHhHhcccc-ccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCC---------
Confidence 654322 123477899999987655 9999999999999999998 789999999999999886432111
Q ss_pred CCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCc
Q 015455 348 LPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSE 400 (406)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~ 400 (406)
..+.++.++.+++..||..+|++|||+..+-+.-
T Consensus 336 -------------------RPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 336 -------------------RPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred -------------------CCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 1246889999999999999999999998875443
No 384
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-39 Score=318.26 Aligned_cols=263 Identities=27% Similarity=0.421 Sum_probs=216.7
Q ss_pred cccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeee---cC
Q 015455 113 RRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTS---RM 188 (406)
Q Consensus 113 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~---~~ 188 (406)
...+.|+++..||.|.||.||+++...+|+..|+|++...... .+.+..|.++|+.+ .|||++.++|+|.. ..
T Consensus 16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~---deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~ 92 (953)
T KOG0587|consen 16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE---EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGN 92 (953)
T ss_pred CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc---cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCC
Confidence 3457899999999999999999999999999999998765533 34456699999988 79999999999853 33
Q ss_pred CceEEEEEecccccHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccc
Q 015455 189 SCSLYLVFHYMEHDLAGLAAS--PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASF 266 (406)
Q Consensus 189 ~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~ 266 (406)
+..+|+|||||++|....+.+ .+..+.|..+..|++.++.||.+||...++|||||-.|||++.++.|||+|||.+..
T Consensus 93 ~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQ 172 (953)
T KOG0587|consen 93 GDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 172 (953)
T ss_pred CCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeee
Confidence 567999999999876654432 266899999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCCCCcCccccCcccccccccCCc----cCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 015455 267 FDPNHKHPMTSRVVTLWYRPPELLLGAT----DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEY 342 (406)
Q Consensus 267 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 342 (406)
++.. .....+.+|||.|||||++.... .|+..+|+||||++..||.-|.+|+.+..+...+-.| ...|+...
T Consensus 173 ldsT-~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~I---pRNPPPkL 248 (953)
T KOG0587|consen 173 LDST-VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI---PRNPPPKL 248 (953)
T ss_pred eecc-cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccC---CCCCCccc
Confidence 8644 34456789999999999986432 3678999999999999999999999988765544333 33333211
Q ss_pred hhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 343 WKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
..+..-+.++.+||..||.+|..+||+..++|.|||+++.
T Consensus 249 -----------------------krp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~ 288 (953)
T KOG0587|consen 249 -----------------------KRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQ 288 (953)
T ss_pred -----------------------cchhhHHHHHHHHHHHHHhhccccCcchhhhccCCccccc
Confidence 0112456778999999999999999999999999999753
No 385
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-39 Score=306.72 Aligned_cols=254 Identities=22% Similarity=0.379 Sum_probs=211.8
Q ss_pred cCCCCcccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeec
Q 015455 108 NGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSR 187 (406)
Q Consensus 108 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~ 187 (406)
+.|--.+ .+...-++||-|.||.||.|.++.-.-.||||.++-+. -..+.|+.|..+|+.++|||+|+|+|+|+.+
T Consensus 260 DkWEmeR-tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt---MeveEFLkEAAvMKeikHpNLVqLLGVCT~E 335 (1157)
T KOG4278|consen 260 DKWEMER-TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHE 335 (1157)
T ss_pred chhhccc-hheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc---hhHHHHHHHHHHHHhhcCccHHHHhhhhccC
Confidence 4553333 34667789999999999999999889999999987543 3467788999999999999999999999985
Q ss_pred CCceEEEEEeccc-ccHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeecccc
Q 015455 188 MSCSLYLVFHYME-HDLAGLAASPE-VKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS 265 (406)
Q Consensus 188 ~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~ 265 (406)
. .+||++|||. |+|++++...+ .-++.-....++.||..||+||..+++|||||.+.|.|+.++..||++||||++
T Consensus 336 p--PFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsR 413 (1157)
T KOG4278|consen 336 P--PFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSR 413 (1157)
T ss_pred C--CeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhh
Confidence 4 4999999997 57888876654 346777788999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhh
Q 015455 266 FFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344 (406)
Q Consensus 266 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 344 (406)
++..+............-|.|||-+.-+. ++.++|||+|||+|||+.| |..||+|.+-.+.+..+.+....
T Consensus 414 lMtgDTYTAHAGAKFPIKWTAPEsLAyNt-FSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM------- 485 (1157)
T KOG4278|consen 414 LMTGDTYTAHAGAKFPIKWTAPESLAYNT-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRM------- 485 (1157)
T ss_pred hhcCCceecccCccCcccccCcccccccc-cccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccc-------
Confidence 98766544333344477899999876433 8899999999999999988 89999999988877766553211
Q ss_pred hcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHH
Q 015455 345 KSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVA 396 (406)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~el 396 (406)
+....+|+.+.+||+.||++.|.+||++.|+
T Consensus 486 ---------------------~~PeGCPpkVYeLMraCW~WsPsDRPsFaei 516 (1157)
T KOG4278|consen 486 ---------------------DGPEGCPPKVYELMRACWNWSPSDRPSFAEI 516 (1157)
T ss_pred ---------------------cCCCCCCHHHHHHHHHHhcCCcccCccHHHH
Confidence 1124899999999999999999999999887
No 386
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-39 Score=314.53 Aligned_cols=202 Identities=33% Similarity=0.533 Sum_probs=171.7
Q ss_pred cceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecC----CceEE
Q 015455 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRM----SCSLY 193 (406)
Q Consensus 118 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~----~~~~~ 193 (406)
+..-+.||+|+||.||+++++.+|+.||||.++... .....+..-+|+++|++++|+|||++.++-+... ...-.
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 455678999999999999999999999999987654 3345667788999999999999999988766554 34468
Q ss_pred EEEecccccHHH-HhcCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEc--CCC--cEEEeeeccccc
Q 015455 194 LVFHYMEHDLAG-LAASPE--VKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLID--DDG--VLKIADFGLASF 266 (406)
Q Consensus 194 lv~e~~~~~l~~-~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~--~~~--~~kl~DFgla~~ 266 (406)
++||||.|+.+. .+..+. ..+++.+...++..+..||.|||++||+||||||.||++- ++| .-||+|||.|+.
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Are 173 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARE 173 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccccc
Confidence 999999986555 554433 4699999999999999999999999999999999999984 334 369999999999
Q ss_pred cCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCC
Q 015455 267 FDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGR 322 (406)
Q Consensus 267 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~ 322 (406)
++.+. ..++.+||..|++||++.....|+..+|.|||||++|+.+||..||...
T Consensus 174 l~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 174 LDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred CCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 87655 4788999999999999885456999999999999999999999999543
No 387
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-38 Score=300.55 Aligned_cols=261 Identities=20% Similarity=0.264 Sum_probs=209.4
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
+...+.++||+|-||.|.+|+. ..+..||+|+++.+.. ......|.+|+.+|.+|+|||||.++|+|..++. ++++
T Consensus 538 s~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~-~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DeP--icmI 613 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDAT-KNARNDFLKEIKILSRLKHPNIVELLGVCVQDDP--LCMI 613 (807)
T ss_pred hheehhhhhcCcccceeEEEEe-cCceEEEEeecCcccc-hhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCc--hHHH
Confidence 4577889999999999999983 5579999999987653 3445778999999999999999999999988544 9999
Q ss_pred EecccccH-HHHhcCCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 196 FHYMEHDL-AGLAASPEVK-FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 196 ~e~~~~~l-~~~~~~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
+|||+.+. .+++.....+ +......+++.||+.||+||.+.++|||||.+.|+|++.++++||+|||+++.+-++...
T Consensus 614 ~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy 693 (807)
T KOG1094|consen 614 TEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY 693 (807)
T ss_pred HHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCce
Confidence 99998754 4455444322 355666779999999999999999999999999999999999999999999976554443
Q ss_pred CC-cCccccCcccccccccCCccCCCccchHHHHHHHHHHH--hCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCC
Q 015455 274 PM-TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELL--AGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 274 ~~-~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell--~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 350 (406)
.. ...+-...|||||.+..+. ++.+||+|+||+++||++ |...||...++.+..++........+....
T Consensus 694 ~vqgr~vlpiRwmawEsillgk-FttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~------- 765 (807)
T KOG1094|consen 694 RVQGRAVLPIRWMAWESILLGK-FTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVV------- 765 (807)
T ss_pred eeecceeeeeeehhHHHHHhcc-ccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCccee-------
Confidence 32 2345578999999987655 999999999999999975 577999998888887777665544332211
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
...++-+|..+.++|..|+..|-++|||.+++ |-+|++
T Consensus 766 --------------l~~P~~cp~~lyelml~Cw~~es~~RPsFe~l--h~~lq~ 803 (807)
T KOG1094|consen 766 --------------LSRPPACPQGLYELMLRCWRRESEQRPSFEQL--HLFLQE 803 (807)
T ss_pred --------------ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHH--HHHHHH
Confidence 11224678889999999999999999999998 444443
No 388
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.1e-36 Score=301.80 Aligned_cols=274 Identities=24% Similarity=0.307 Sum_probs=185.8
Q ss_pred cCCcceeeeeccCCceEEEEEEEc----------------cCCcEEEEEEEecCCCCh------------HHHHHHHHHH
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDM----------------LTGKIVALKKVRFDNLEP------------ESVKFMAREI 166 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~----------------~~~~~vaiK~~~~~~~~~------------~~~~~~~~E~ 166 (406)
.++|++.++||+|+||+||+|... ..++.||||.+....... ...+....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 579999999999999999999642 345689999986532110 0111233477
Q ss_pred HHHhhCCCCCe-----eeEeeeeeec------CCceEEEEEecccccHHHHhcC-C-----------------------C
Q 015455 167 LILRRLDHPNV-----IKLEGLVTSR------MSCSLYLVFHYMEHDLAGLAAS-P-----------------------E 211 (406)
Q Consensus 167 ~~l~~l~h~~i-----v~l~~~~~~~------~~~~~~lv~e~~~~~l~~~~~~-~-----------------------~ 211 (406)
.++.+++|.++ ++++++|... .....++||||++++.+..+.. . .
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 77777776654 6677776532 1235799999998754433221 1 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCccccCccccccccc
Q 015455 212 VKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLL 291 (406)
Q Consensus 212 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~gt~~y~aPE~~~ 291 (406)
..+++..++.++.|++.||.|||+.+|+||||||+|||++.++.+||+|||++...............+|+.|+|||.+.
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~ 383 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELV 383 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhc
Confidence 23467889999999999999999999999999999999999999999999999765433222222234589999999875
Q ss_pred CCcc-------------------CC--CccchHHHHHHHHHHHhCCC-CCCCCChHHHHHHHHHHhCCCCHHHhhhcCCC
Q 015455 292 GATD-------------------YG--VGVDLWSAGCILAELLAGKP-IMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLP 349 (406)
Q Consensus 292 ~~~~-------------------~~--~~~DvwslGv~l~ell~g~~-pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 349 (406)
.... |+ .+.||||+||++|+|++|.. ||.+..... ...+.... ....|...+-.
T Consensus 384 ~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~---~~~~~~~~-~~~~~r~~~~~ 459 (507)
T PLN03224 384 MPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFN---TELRQYDN-DLNRWRMYKGQ 459 (507)
T ss_pred CCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhh---hHHhhccc-hHHHHHhhccc
Confidence 3210 22 24799999999999999875 665432111 11110000 00111111000
Q ss_pred CcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCC---CCCcCHHHHhcCccccc
Q 015455 350 NATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDP---AERLTATVALNSEVSYQ 404 (406)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP---~~Rpta~elL~h~~f~~ 404 (406)
.. -...+...++..+||+.+||.++| .+|+|+.|+|+||||..
T Consensus 460 ~~------------~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 460 KY------------DFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred CC------------CcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 00 001234578889999999999876 68999999999999975
No 389
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=2e-36 Score=274.95 Aligned_cols=242 Identities=40% Similarity=0.649 Sum_probs=195.2
Q ss_pred CceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEecccc-cHHHH
Q 015455 128 TYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGL 206 (406)
Q Consensus 128 ~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~-~l~~~ 206 (406)
+||.||+|....+|+.+|+|++........ ...+.+|+..+++++|+|++++++.+... ...++++|++++ ++...
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~~l~~e~~~~~~L~~~ 77 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDE--DKLYLVMEYCDGGDLFDL 77 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeC--CEEEEEEeCCCCCCHHHH
Confidence 589999999888899999999876543322 56788899999999999999999998874 568999999998 55554
Q ss_pred hcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCccccCcccc
Q 015455 207 AASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRP 286 (406)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~gt~~y~a 286 (406)
+.. ...+++..+..++.+++.++.+||+.+++|+||+|.||+++.++.++|+|||.+....... ......++..|+|
T Consensus 78 ~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~ 154 (244)
T smart00220 78 LKK-RGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPEYMA 154 (244)
T ss_pred HHh-ccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcCCCC
Confidence 433 3348999999999999999999999999999999999999999999999999998775432 2345567889999
Q ss_pred cccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhh
Q 015455 287 PELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQ-LHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQ 365 (406)
Q Consensus 287 PE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (406)
||.+.+.. ++.++||||||+++|+|++|..||........ ...+.........
T Consensus 155 pE~~~~~~-~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~------------------------- 208 (244)
T smart00220 155 PEVLLGKG-YGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPP------------------------- 208 (244)
T ss_pred HHHHccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCcc-------------------------
Confidence 99887544 78899999999999999999999987433333 3322211100000
Q ss_pred hhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccc
Q 015455 366 ETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVS 402 (406)
Q Consensus 366 ~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f 402 (406)
....++..+.+++.+||..||.+||++.++++||||
T Consensus 209 -~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 209 -PEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred -ccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 001167789999999999999999999999999997
No 390
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-36 Score=255.25 Aligned_cols=217 Identities=25% Similarity=0.392 Sum_probs=181.2
Q ss_pred CcccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCc
Q 015455 112 PRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 112 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~ 190 (406)
....++...+..||+|+||.|-+.++..+|+..|+|.++..-.. ....+++.|+++..+. .+|++|.++|..... +
T Consensus 42 eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~-q~q~r~L~dldi~~r~~~CPf~V~FyGa~~re--g 118 (282)
T KOG0984|consen 42 EVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNS-QEQKRLLMDLDIIMRTVDCPFTVHFYGALFRE--G 118 (282)
T ss_pred ccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcCh-HHHHHHHHhhhhhccCCCCCeEEEeehhhhcc--c
Confidence 34457778889999999999999999999999999999765433 4455677799887765 799999999977663 4
Q ss_pred eEEEEEecccccHHHHh---cCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCCeEEcCCCcEEEeeeccccc
Q 015455 191 SLYLVFHYMEHDLAGLA---ASPEVKFTEPQVKCYMHQLLSGLEHCHNN-GVLHRDIKGSNLLIDDDGVLKIADFGLASF 266 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~~~---~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFgla~~ 266 (406)
.+|+.||.|..++..+. ...++.++|..+-+++..++.||.|||++ .+||||+||+|||++.+|++|+||||.+-.
T Consensus 119 dvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~ 198 (282)
T KOG0984|consen 119 DVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGY 198 (282)
T ss_pred cEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEccccccee
Confidence 59999999998876543 56788999999999999999999999987 899999999999999999999999999987
Q ss_pred cCCCCCCCCcCccccCcccccccccC---CccCCCccchHHHHHHHHHHHhCCCCCC-CCChHHHHHHHHH
Q 015455 267 FDPNHKHPMTSRVVTLWYRPPELLLG---ATDYGVGVDLWSAGCILAELLAGKPIMP-GRTEVEQLHKIYK 333 (406)
Q Consensus 267 ~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~~DvwslGv~l~ell~g~~pf~-~~~~~~~~~~i~~ 333 (406)
+..+-. .+-..|-..|+|||.+.. ...|+.++||||||+++.||++++.||. +.++-+++..+++
T Consensus 199 L~dSiA--kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe 267 (282)
T KOG0984|consen 199 LVDSIA--KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE 267 (282)
T ss_pred ehhhhH--HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence 753322 232456778999999853 2358999999999999999999999996 4677788887766
No 391
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-37 Score=303.19 Aligned_cols=250 Identities=27% Similarity=0.354 Sum_probs=194.0
Q ss_pred CCcceeeeeccCCce-EEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCceEE
Q 015455 116 DSFEKIDKIGQGTYS-NVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g-~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~~~~ 193 (406)
.-|.-.+.+|.|+-| .||+|. ..|+.||||.+.. +......+|+..|+.- +|||||++ ||.+.....+|
T Consensus 509 ~~~~~~eilG~Gs~Gt~Vf~G~--ye~R~VAVKrll~-----e~~~~A~rEi~lL~eSD~H~NviRy--yc~E~d~qF~Y 579 (903)
T KOG1027|consen 509 LFFSPKEILGYGSNGTVVFRGV--YEGREVAVKRLLE-----EFFDFAQREIQLLQESDEHPNVIRY--YCSEQDRQFLY 579 (903)
T ss_pred eeeccHHHcccCCCCcEEEEEe--eCCceehHHHHhh-----HhHHHHHHHHHHHHhccCCCceEEE--EeeccCCceEE
Confidence 346666889999888 489995 7889999998753 3355677899999988 69999999 55666678899
Q ss_pred EEEecccccHHHHhcCC--CCCCCH-HHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcC---C--CcEEEeeecccc
Q 015455 194 LVFHYMEHDLAGLAASP--EVKFTE-PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD---D--GVLKIADFGLAS 265 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~--~~~~~~-~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~---~--~~~kl~DFgla~ 265 (406)
+..|.|..+|.++.... ...... ...+.++.|++.||++||+.+||||||||.||||+. + .+++|+|||+++
T Consensus 580 IalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsK 659 (903)
T KOG1027|consen 580 IALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSK 659 (903)
T ss_pred EEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccccc
Confidence 99999999999988763 111111 456788899999999999999999999999999975 3 468999999999
Q ss_pred ccCCCCCCC--CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhCCCCHHH
Q 015455 266 FFDPNHKHP--MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAG-KPIMPGRTEVEQLHKIYKLCGSPSEEY 342 (406)
Q Consensus 266 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~ 342 (406)
.+..+.... .....||-+|+|||++.... -+.++||||+||++|+.++| ..||...- +.-.+|.......
T Consensus 660 kl~~~~sS~~r~s~~sGt~GW~APE~L~~~~-~~~avDiFslGCvfyYvltgG~HpFGd~~--~R~~NIl~~~~~L---- 732 (903)
T KOG1027|consen 660 KLAGGKSSFSRLSGGSGTSGWQAPEQLREDR-KTQAVDIFSLGCVFYYVLTGGSHPFGDSL--ERQANILTGNYTL---- 732 (903)
T ss_pred ccCCCcchhhcccCCCCcccccCHHHHhccc-cCcccchhhcCceEEEEecCCccCCCchH--HhhhhhhcCccce----
Confidence 987665432 34567899999999998755 56799999999999999986 79997543 2223343311000
Q ss_pred hhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccc
Q 015455 343 WKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSY 403 (406)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~ 403 (406)
....+.-..++.|||.+||++||..||||.++|.||+|=
T Consensus 733 ----------------------~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW 771 (903)
T KOG1027|consen 733 ----------------------VHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFW 771 (903)
T ss_pred ----------------------eeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccC
Confidence 000011111789999999999999999999999999984
No 392
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=9.1e-35 Score=315.57 Aligned_cols=253 Identities=21% Similarity=0.287 Sum_probs=182.7
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
..|...+.||+|+||.||+|++..+|..||+|.+...... ...|++++++++|||||++++++.+. ...|+|
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~l~~l~HpnIv~~~~~~~~~--~~~~lv 761 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI------PSSEIADMGKLQHPNIVKLIGLCRSE--KGAYLI 761 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc------cHHHHHHHhhCCCCCcceEEEEEEcC--CCCEEE
Confidence 3466778999999999999998889999999988643211 12368899999999999999999874 458999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH---NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK 272 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~ 272 (406)
|||++++.+..+.. .+++..+..++.||+.||+||| +.+|+||||||+||+++.++..++. ||........
T Consensus 762 ~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~-- 835 (968)
T PLN00113 762 HEYIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD-- 835 (968)
T ss_pred EeCCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC--
Confidence 99999765554443 4899999999999999999999 6699999999999999999888875 6665433211
Q ss_pred CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhC-CCCHHHhhhcCCCC
Q 015455 273 HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEV-EQLHKIYKLCG-SPSEEYWKKSKLPN 350 (406)
Q Consensus 273 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~-~~~~~i~~~~~-~~~~~~~~~~~~~~ 350 (406)
....+|+.|+|||++.+.. ++.++|||||||++|||++|+.||...... .......+... ......+.......
T Consensus 836 ---~~~~~t~~y~aPE~~~~~~-~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (968)
T PLN00113 836 ---TKCFISSAYVAPETRETKD-ITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRG 911 (968)
T ss_pred ---CCccccccccCcccccCCC-CCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccC
Confidence 2346789999999987654 999999999999999999999998532211 01111111100 00000000000000
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
... .......++.+++.+||+.||++|||+.++++.
T Consensus 912 ------~~~-------~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 912 ------DVS-------VNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred ------CCC-------ccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 000 000112246789999999999999999999863
No 393
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-37 Score=294.55 Aligned_cols=260 Identities=27% Similarity=0.400 Sum_probs=221.6
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|+.+.++|+|.||.||+++++.+++..|+|+++.... +...-+..|+-+++..+|||||.++|.+..+.. +|+.
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~--dd~~~iqqei~~~~dc~h~nivay~gsylr~dk--lwic 90 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG--DDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDK--LWIC 90 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCC--ccccccccceeeeecCCCcChHHHHhhhhhhcC--cEEE
Confidence 789999999999999999999999999999999987643 345567789999999999999999998876544 9999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCC
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM 275 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~ 275 (406)
||||+++.++....-.+++++.++....+..+.||+|||+.|=+|||||-.|||+++.|.+|+.|||.+..+...- ...
T Consensus 91 MEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati-~Kr 169 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATI-AKR 169 (829)
T ss_pred EEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhh-hhh
Confidence 9999998888777777899999999999999999999999999999999999999999999999999998775432 224
Q ss_pred cCccccCccccccccc--CCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 276 TSRVVTLWYRPPELLL--GATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 276 ~~~~gt~~y~aPE~~~--~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
.++.||+.|||||+.. ....|+..+|||++|+...|+-.-++|.....+...+..+-+....|+..
T Consensus 170 ksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~l------------ 237 (829)
T KOG0576|consen 170 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTL------------ 237 (829)
T ss_pred hcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcc------------
Confidence 6789999999999863 23349999999999999999999999988877777766665543333321
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
+....-++.+.+|++.+|.++|++|||++.+|+|||..+
T Consensus 238 ------------kDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~ 276 (829)
T KOG0576|consen 238 ------------KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ 276 (829)
T ss_pred ------------cCCccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence 001134677899999999999999999999999999865
No 394
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=1.6e-35 Score=273.58 Aligned_cols=281 Identities=30% Similarity=0.483 Sum_probs=205.6
Q ss_pred cCCcceeeeeccCCceEEEEEEEcc---CCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCc
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDML---TGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~ 190 (406)
.+.|.++++||.|.|++||++.+.. ....||+|.+..... ...+.+|+++|..+ .+.||+++.+++... .
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~----p~ri~~El~~L~~~gG~~ni~~~~~~~rnn--d 108 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS----PSRILNELEMLYRLGGSDNIIKLNGCFRNN--D 108 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC----chHHHHHHHHHHHhccchhhhcchhhhccC--C
Confidence 3679999999999999999998776 678999999875442 23477899999999 699999999888774 4
Q ss_pred eEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEc-CCCcEEEeeeccccccCC
Q 015455 191 SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDP 269 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~-~~~~~kl~DFgla~~~~~ 269 (406)
...+|+||+++.....+.. .++..+++.+++.++.||.++|.+|||||||||.|+|.+ ..+.-.|+|||||...+.
T Consensus 109 ~v~ivlp~~~H~~f~~l~~---~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~ 185 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYR---SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDG 185 (418)
T ss_pred eeEEEecccCccCHHHHHh---cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHh
Confidence 5999999999855444433 467899999999999999999999999999999999998 457889999999972210
Q ss_pred CC-------------------------------------------CCCCcCccccCcccccccccCCccCCCccchHHHH
Q 015455 270 NH-------------------------------------------KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAG 306 (406)
Q Consensus 270 ~~-------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslG 306 (406)
.. ........||++|+|||++...+.-+.++||||.|
T Consensus 186 ~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~G 265 (418)
T KOG1167|consen 186 YQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAG 265 (418)
T ss_pred hhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecc
Confidence 00 00012357899999999999888788999999999
Q ss_pred HHHHHHHhCCCCCCC-CChHHHHHHHHHHhCCCCHH----------HhhhcCCCCc---ccC--CC----CCchh--hhh
Q 015455 307 CILAELLAGKPIMPG-RTEVEQLHKIYKLCGSPSEE----------YWKKSKLPNA---TLF--KP----REPYK--RCI 364 (406)
Q Consensus 307 v~l~ell~g~~pf~~-~~~~~~~~~i~~~~~~~~~~----------~~~~~~~~~~---~~~--~~----~~~~~--~~~ 364 (406)
||+.-+++++.||-. .++.+.+..|....|...-. .|.....+.. ... .. ....+ ++.
T Consensus 266 VI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~ 345 (418)
T KOG1167|consen 266 VILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTE 345 (418)
T ss_pred ceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccccccee
Confidence 999999999999854 33444444444433322111 1111110000 000 00 00000 111
Q ss_pred hhhcC-CCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 365 QETFK-DFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 365 ~~~~~-~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.+... .++..+.+|+.+||..||.+|.||+++|.||||.+
T Consensus 346 ~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~ 386 (418)
T KOG1167|consen 346 REIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE 386 (418)
T ss_pred eccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence 22222 23457899999999999999999999999999974
No 395
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-34 Score=293.50 Aligned_cols=251 Identities=26% Similarity=0.379 Sum_probs=199.2
Q ss_pred CCcceeeeeccCCceEEEEEEEc---c----CCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeec
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDM---L----TGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSR 187 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~---~----~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~ 187 (406)
++..+.+.||+|.||.|++|.-. . ....||||.++..... ...+.+..|+++|+.+ .|+||+.++|++..
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~- 373 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQ- 373 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeecc-
Confidence 44567779999999999999732 1 1457999998765544 6677889999999999 59999999999998
Q ss_pred CCceEEEEEecccc-cHHHHhcCCC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEc
Q 015455 188 MSCSLYLVFHYMEH-DLAGLAASPE---------------VKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLID 251 (406)
Q Consensus 188 ~~~~~~lv~e~~~~-~l~~~~~~~~---------------~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~ 251 (406)
.+.+++|+||+.. +++.++...+ ..++......++.||+.|++||++.++|||||.+.|||+.
T Consensus 374 -~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~ 452 (609)
T KOG0200|consen 374 -DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLIT 452 (609)
T ss_pred -CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEec
Confidence 5669999999986 5666655544 3489999999999999999999999999999999999999
Q ss_pred CCCcEEEeeeccccccCCCCCCCCcCcc--ccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCC-hHHH
Q 015455 252 DDGVLKIADFGLASFFDPNHKHPMTSRV--VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRT-EVEQ 327 (406)
Q Consensus 252 ~~~~~kl~DFgla~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~-~~~~ 327 (406)
.+..+||+|||+|+.............. -...|||||.+.. ..|+.++|||||||+||||++ |..|+++.. ..+.
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~-~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l 531 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD-RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEEL 531 (609)
T ss_pred CCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc-CcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHH
Confidence 9999999999999865433222112222 2445999999987 459999999999999999998 889999865 4444
Q ss_pred HHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 328 LHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 328 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
++.+.+.... +.+..+++++.++++.|++.+|++||+..++..
T Consensus 532 ~~~l~~G~r~----------------------------~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 532 LEFLKEGNRM----------------------------EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred HHHHhcCCCC----------------------------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 4433332110 112367889999999999999999999998864
No 396
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-35 Score=272.44 Aligned_cols=266 Identities=24% Similarity=0.301 Sum_probs=186.5
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhh--CCCCCeeeEeeeeeecC--Cc
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRR--LDHPNVIKLEGLVTSRM--SC 190 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~~iv~l~~~~~~~~--~~ 190 (406)
....++++.||+|.||.||+|+ -+++.||||++.. .....+.+|.+|.+. ++|+||++++++-.... ..
T Consensus 209 l~pl~l~eli~~Grfg~V~Kaq--L~~~~VAVKifp~-----~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ 281 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQ--LDNRLVAVKIFPE-----QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRM 281 (534)
T ss_pred CCchhhHHHhhcCccceeehhh--ccCceeEEEecCH-----HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccc
Confidence 4567888999999999999996 5669999999863 446678888888775 48999999987643211 33
Q ss_pred eEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCeeccCCCCCeEEcCCCcEEEeee
Q 015455 191 SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN---------GVLHRDIKGSNLLIDDDGVLKIADF 261 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---------~ivHrDlkp~NIll~~~~~~kl~DF 261 (406)
.+++|++|.+.+.+..++..+ .++|....+++..|+.||+|||+- .|+|||||..||||..|+++.|+||
T Consensus 282 eywLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF 360 (534)
T KOG3653|consen 282 EYWLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF 360 (534)
T ss_pred ceeEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence 589999999865544443333 789999999999999999999973 5999999999999999999999999
Q ss_pred ccccccCCCCCC-CCcCccccCcccccccccCCccCC-----CccchHHHHHHHHHHHhCCCCCC-CCChHHHHHHHHHH
Q 015455 262 GLASFFDPNHKH-PMTSRVVTLWYRPPELLLGATDYG-----VGVDLWSAGCILAELLAGKPIMP-GRTEVEQLHKIYKL 334 (406)
Q Consensus 262 gla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~-----~~~DvwslGv~l~ell~g~~pf~-~~~~~~~~~~i~~~ 334 (406)
|||..+.++... .....+||.+|||||++.|..++. .+.||||+|.+||||++...-+. +..+.=++.--.+.
T Consensus 361 GLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ev 440 (534)
T KOG3653|consen 361 GLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEV 440 (534)
T ss_pred ceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHh
Confidence 999988755443 233478999999999998876555 37899999999999999654432 22111111100011
Q ss_pred hCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHH
Q 015455 335 CGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTAT 394 (406)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~ 394 (406)
-..|+-+.+....... ..+..+...+... .....+.+.|+.|++.||+.|.||.
T Consensus 441 G~hPt~e~mq~~VV~k----K~RP~~p~~W~~h--~~~~~l~et~EeCWDhDaeARLTA~ 494 (534)
T KOG3653|consen 441 GNHPTLEEMQELVVRK----KQRPKIPDAWRKH--AGMAVLCETIEECWDHDAEARLTAG 494 (534)
T ss_pred cCCCCHHHHHHHHHhh----ccCCCChhhhhcC--ccHHHHHHHHHHHcCCchhhhhhhH
Confidence 1112211111100000 0000111111110 2234589999999999999999975
No 397
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3e-34 Score=282.52 Aligned_cols=249 Identities=23% Similarity=0.290 Sum_probs=205.1
Q ss_pred CcceeeeeccCCceEEEEEEEccCCc----EEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGK----IVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~ 192 (406)
..+..++||+|+||+||+|.+...|+ +||||++.... .......++.|+.+|.+++|||+++|++++.... +
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t-~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~---~ 772 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT-SPKASIELLDEALRMASLDHPNLLRLLGVCMLST---L 772 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC-CchhhHHHHHHHHHHhcCCCchHHHHhhhcccch---H
Confidence 45667899999999999999877765 78999886544 3344566888999999999999999999998642 7
Q ss_pred EEEEecccc-cHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCC
Q 015455 193 YLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 193 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~ 271 (406)
-||++||+. .|++++...+..+-.+....|..||++||.|||.++++||||-..||||..-.++||+|||+++.+..+.
T Consensus 773 qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 773 QLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred HHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 899999986 5777888788889999999999999999999999999999999999999999999999999999987665
Q ss_pred CCCCcC-ccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCC
Q 015455 272 KHPMTS-RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLP 349 (406)
Q Consensus 272 ~~~~~~-~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 349 (406)
...... ....+-|||=|.+... .|+.++|||||||++||++| |..|+.+....+.-..+.+..+ .
T Consensus 853 ~ey~~~~gK~pikwmale~i~~~-~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geR-L----------- 919 (1177)
T KOG1025|consen 853 KEYSAPGGKVPIKWMALESIRIR-KYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGER-L----------- 919 (1177)
T ss_pred ccccccccccCcHHHHHHHhhcc-CCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcccc-C-----------
Confidence 543332 2336778999988764 49999999999999999988 8899998876665444433211 1
Q ss_pred CcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 350 NATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
..++..+-++.-++.+||..|+..||+++++.+
T Consensus 920 ----------------sqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 920 ----------------SQPPICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred ----------------CCCCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 112467788999999999999999999988754
No 398
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-34 Score=270.04 Aligned_cols=204 Identities=25% Similarity=0.428 Sum_probs=175.1
Q ss_pred cccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC------hHHHHHHHHHHHHHhhCC---CCCeeeEeee
Q 015455 113 RRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE------PESVKFMAREILILRRLD---HPNVIKLEGL 183 (406)
Q Consensus 113 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~~E~~~l~~l~---h~~iv~l~~~ 183 (406)
....+|..++.||+|+||.|++|.++.+...|+||.|.+++.- ....-.+--|+.||..|+ |+||++++++
T Consensus 558 ~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf 637 (772)
T KOG1152|consen 558 KKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF 637 (772)
T ss_pred cccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe
Confidence 3356799999999999999999999999999999999876531 111223445999999997 9999999999
Q ss_pred eeecCCceEEEEEeccccc-HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeec
Q 015455 184 VTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFG 262 (406)
Q Consensus 184 ~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFg 262 (406)
|++ ..++|++||--+.+ .+..+...+..++|.+++.+++|++.|+++||+.||||||||-+|+.++.+|-+||+|||
T Consensus 638 FEd--dd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 638 FED--DDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred eec--CCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeecc
Confidence 998 56799999987653 333455666689999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCC
Q 015455 263 LASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPG 321 (406)
Q Consensus 263 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~ 321 (406)
.|.....+ +...++||..|.|||++.|....+..-|||++|++||-++....||..
T Consensus 716 saa~~ksg---pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 716 SAAYTKSG---PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred chhhhcCC---CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 99886544 356789999999999998888778999999999999999999988864
No 399
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-32 Score=252.75 Aligned_cols=191 Identities=27% Similarity=0.372 Sum_probs=153.2
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhh--CCCCCeeeEeeeeee--cCCce
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRR--LDHPNVIKLEGLVTS--RMSCS 191 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~~iv~l~~~~~~--~~~~~ 191 (406)
.+..+.+.||+|.||.||+|+ ..|..||||++.... ...+.+|.+|.+. |+|+||+.+++.-.. .....
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~--wrGe~VAVKiF~srd-----E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQ 283 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGR--WRGEDVAVKIFSSRD-----ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQ 283 (513)
T ss_pred heeEEEEEecCccccceeecc--ccCCceEEEEecccc-----hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEE
Confidence 578899999999999999996 688999999986432 2234456666665 599999999775432 22346
Q ss_pred EEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeeccCCCCCeEEcCCCcEEEeeecc
Q 015455 192 LYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN--------GVLHRDIKGSNLLIDDDGVLKIADFGL 263 (406)
Q Consensus 192 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~--------~ivHrDlkp~NIll~~~~~~kl~DFgl 263 (406)
+|+|++|.+.|.+..++.+ ..++.....+++..++.||++||-. .|.|||||..||||..++.+-|+|+||
T Consensus 284 LwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGL 362 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 362 (513)
T ss_pred EEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeecee
Confidence 8999999997655555444 4889999999999999999999963 499999999999999999999999999
Q ss_pred ccccCCCCCC---CCcCccccCcccccccccCCccCC-----CccchHHHHHHHHHHHh
Q 015455 264 ASFFDPNHKH---PMTSRVVTLWYRPPELLLGATDYG-----VGVDLWSAGCILAELLA 314 (406)
Q Consensus 264 a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~-----~~~DvwslGv~l~ell~ 314 (406)
|......... ..+..+||.+|||||++....+.. ..+||||||.++||++.
T Consensus 363 Av~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiar 421 (513)
T KOG2052|consen 363 AVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIAR 421 (513)
T ss_pred eEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHH
Confidence 9887655332 345679999999999986543211 36899999999999986
No 400
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.98 E-value=6.5e-31 Score=232.88 Aligned_cols=213 Identities=39% Similarity=0.645 Sum_probs=179.8
Q ss_pred eccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEecccc-c
Q 015455 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-D 202 (406)
Q Consensus 124 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~-~ 202 (406)
||+|++|.||+++...+++.+++|++....... ....+.+|+..++.++|++++++++++... ...++++|++.+ .
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~~~~~e~~~~~~ 77 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDE--NHLYLVMEYCEGGS 77 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecC--CeEEEEEecCCCCc
Confidence 689999999999987779999999987654322 346788899999999999999999998874 568999999995 5
Q ss_pred HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcC-CCcEEEeeeccccccCCCCCCCCcCcccc
Q 015455 203 LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD-DGVLKIADFGLASFFDPNHKHPMTSRVVT 281 (406)
Q Consensus 203 l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~-~~~~kl~DFgla~~~~~~~~~~~~~~~gt 281 (406)
+...+......+++..++.++.+++.+|.+||+.|++|+||+|.||+++. ++.++|+|||.+........ ......+.
T Consensus 78 l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~ 156 (215)
T cd00180 78 LKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTIVGT 156 (215)
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcccCC
Confidence 55554444357899999999999999999999999999999999999999 89999999999987654321 12345678
Q ss_pred CcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchh
Q 015455 282 LWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYK 361 (406)
Q Consensus 282 ~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (406)
..|++||.+.....++.++|+|++|+++++|
T Consensus 157 ~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------------- 187 (215)
T cd00180 157 PAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------------- 187 (215)
T ss_pred CCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------------
Confidence 8999999887653578899999999999999
Q ss_pred hhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCc
Q 015455 362 RCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSE 400 (406)
Q Consensus 362 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~ 400 (406)
+.+.+++..||+.||.+|||+.++++++
T Consensus 188 -----------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 -----------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred -----------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 1356789999999999999999999874
No 401
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=1.9e-32 Score=290.42 Aligned_cols=199 Identities=16% Similarity=0.179 Sum_probs=143.7
Q ss_pred CCeeeEeeeeee-----cCCceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeE
Q 015455 175 PNVIKLEGLVTS-----RMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLL 249 (406)
Q Consensus 175 ~~iv~l~~~~~~-----~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIl 249 (406)
+||++++++|.. .....+++++|+++++|...+......+++.+++.++.||+.||+|||++||+||||||+|||
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiL 112 (793)
T PLN00181 33 DYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFV 112 (793)
T ss_pred HHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEE
Confidence 466677776621 112357889999999988888766667999999999999999999999999999999999999
Q ss_pred EcCCC-------------------cEEEeeeccccccCCCCC---------------CCCcCccccCcccccccccCCcc
Q 015455 250 IDDDG-------------------VLKIADFGLASFFDPNHK---------------HPMTSRVVTLWYRPPELLLGATD 295 (406)
Q Consensus 250 l~~~~-------------------~~kl~DFgla~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~~~~ 295 (406)
|+..+ .+|++|||+++....... ......+||++|+|||++.+..
T Consensus 113 l~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~- 191 (793)
T PLN00181 113 MSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSS- 191 (793)
T ss_pred EcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCC-
Confidence 96544 455556665543211000 0011246799999999988755
Q ss_pred CCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCCh
Q 015455 296 YGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSS 375 (406)
Q Consensus 296 ~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (406)
|+.++|||||||+||||++|.+|+.... ..+..+.... .++. .....+..
T Consensus 192 ~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~-~~~~---------------------------~~~~~~~~ 241 (793)
T PLN00181 192 SNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRV-LPPQ---------------------------ILLNWPKE 241 (793)
T ss_pred CCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhh-cChh---------------------------hhhcCHHH
Confidence 8999999999999999999988875321 1222221110 0000 00113346
Q ss_pred HHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 376 LPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 376 ~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
.+++..||++||.+|||+.|+|+||||.+
T Consensus 242 ~~~~~~~L~~~P~~Rps~~eil~h~~~~~ 270 (793)
T PLN00181 242 ASFCLWLLHPEPSCRPSMSELLQSEFINE 270 (793)
T ss_pred HHHHHHhCCCChhhCcChHHHhhchhhhh
Confidence 78999999999999999999999999974
No 402
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=2.4e-30 Score=232.70 Aligned_cols=212 Identities=38% Similarity=0.611 Sum_probs=173.6
Q ss_pred cceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEe
Q 015455 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFH 197 (406)
Q Consensus 118 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e 197 (406)
|.+.+.||+|++|.||++.+..+++.+|+|.+...... .....+.+|++.++.++|+|++++++++... ...++++|
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~--~~~~~v~e 77 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDP--EPLYLVME 77 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecC--CceEEEEe
Confidence 56788999999999999998888999999998765433 2466788899999999999999999988764 45899999
Q ss_pred cccc-cHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCc
Q 015455 198 YMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMT 276 (406)
Q Consensus 198 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~ 276 (406)
++.+ .+...+......+++..+..++.+++.+|.+||+.+++|+||+|.||+++.++.++|+|||++............
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (225)
T smart00221 78 YCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLK 157 (225)
T ss_pred ccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccccc
Confidence 9998 555544433322899999999999999999999999999999999999999999999999999887544311224
Q ss_pred CccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCC-CChH-HHHHHHH
Q 015455 277 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPG-RTEV-EQLHKIY 332 (406)
Q Consensus 277 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~-~~~~-~~~~~i~ 332 (406)
...++..|++||.+.+...++.++|+|+||+++++|++|+.||.. .+.. ...+.+.
T Consensus 158 ~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~ 215 (225)
T smart00221 158 TVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWS 215 (225)
T ss_pred ceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHh
Confidence 456788999999874334578899999999999999999999977 4444 4444443
No 403
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=9.7e-31 Score=228.95 Aligned_cols=257 Identities=22% Similarity=0.252 Sum_probs=190.5
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCceEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~~~~ 193 (406)
.+.|.+.+.||+|.||.+-+++++.+.+.+++|.+.... ...+.|.+|..---.| .|.||+.-+++...- .++++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~---tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt-~d~Yv 98 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ---TTQADFVREFHYSFFLSPHQHIIDTYEVAFQT-SDAYV 98 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch---hhHHHHHHHhccceeeccchhhhHHHHHHhhc-CceEE
Confidence 478999999999999999999999999999999987544 3355677888766666 589999877654332 44788
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEc--CCCcEEEeeeccccccCCCC
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLID--DDGVLKIADFGLASFFDPNH 271 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~--~~~~~kl~DFgla~~~~~~~ 271 (406)
+++||++.+.+..-... ..+-|...+.++.|++.|+.|+|+.++||||||.+||||- +..++||||||+....+..-
T Consensus 99 F~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV 177 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTV 177 (378)
T ss_pred EeeccCccchhhhhcCc-ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCcee
Confidence 99999997655544333 3578899999999999999999999999999999999994 33489999999987654221
Q ss_pred CCCCcCccccCcccccccccCC----ccCCCccchHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHhhhc
Q 015455 272 KHPMTSRVVTLWYRPPELLLGA----TDYGVGVDLWSAGCILAELLAGKPIMPGRTEV-EQLHKIYKLCGSPSEEYWKKS 346 (406)
Q Consensus 272 ~~~~~~~~gt~~y~aPE~~~~~----~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~ 346 (406)
.....+..|.|||.+... -...+.+|+|.||+++|.++||.+||...... ..+.+..+- ...
T Consensus 178 ----~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w---------~~r 244 (378)
T KOG1345|consen 178 ----KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQW---------LKR 244 (378)
T ss_pred ----hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHH---------hcc
Confidence 122346679999987432 22467899999999999999999999732211 111222221 111
Q ss_pred CCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCC---cCHHHHhcCccc
Q 015455 347 KLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAER---LTATVALNSEVS 402 (406)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R---pta~elL~h~~f 402 (406)
+-+ .++..++.+++.+..+.++-|..+|++| .++...-..-|.
T Consensus 245 k~~-------------~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~ 290 (378)
T KOG1345|consen 245 KNP-------------ALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWK 290 (378)
T ss_pred cCc-------------cCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHH
Confidence 111 2345556789999999999999999999 556555555554
No 404
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.96 E-value=2.4e-29 Score=230.12 Aligned_cols=253 Identities=22% Similarity=0.297 Sum_probs=200.1
Q ss_pred cCCcceeeeeccCCceEEEEEEEccC-----CcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCC
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLT-----GKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMS 189 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~ 189 (406)
.++++....+.+|.||.||.|.+... .+.|-+|.++.. ..+-....++.|-..+..+.|||+..+.+++.+. .
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~-AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~-~ 360 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH-ASQIQVNLLLQESMLLYGASHPNLLSVLGVSIED-Y 360 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc-ccHHHHHHHHHHHHHHhcCcCCCccceeEEEeec-c
Confidence 46688888999999999999965432 245667776433 3455667788899999999999999999988764 3
Q ss_pred ceEEEEEeccccc-HHHHhc-----CC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeee
Q 015455 190 CSLYLVFHYMEHD-LAGLAA-----SP--EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADF 261 (406)
Q Consensus 190 ~~~~lv~e~~~~~-l~~~~~-----~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DF 261 (406)
...++.+.+++-+ +..++. .. ...++..+...++.|++.|++|||++|+||.||...|.+|++.-++||+|=
T Consensus 361 ~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDs 440 (563)
T KOG1024|consen 361 ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDS 440 (563)
T ss_pred CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccc
Confidence 4567888888754 444443 11 235777888999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCcC-ccccCcccccccccCCccCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCC
Q 015455 262 GLASFFDPNHKHPMTS-RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPS 339 (406)
Q Consensus 262 gla~~~~~~~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~ 339 (406)
.+++.+-+.+.+-... ..-...||+||.+.... |+.++|+|||||+||||+| |+.|+...++.+...-+.+..+.
T Consensus 441 aLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~-yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRl-- 517 (563)
T KOG1024|consen 441 ALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSH-YSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRL-- 517 (563)
T ss_pred hhccccCcccccccCCCCCCcccccCHHHHhhhh-hcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhcccee--
Confidence 9999876665543222 12366799999988755 9999999999999999998 88999998888876666543211
Q ss_pred HHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 340 EEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
.+ +-.+|+++..++.-||+.+|++||+.+++..
T Consensus 518 --------------aQ------------P~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 518 --------------AQ------------PFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred --------------cC------------CCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 01 1278999999999999999999999999864
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.96 E-value=3.7e-29 Score=217.33 Aligned_cols=166 Identities=22% Similarity=0.273 Sum_probs=127.7
Q ss_pred ccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCccc
Q 015455 201 HDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280 (406)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~g 280 (406)
|+|.+.+...+..+++..++.++.||+.||.|||+.+ ||+|||++.++.+++ ||++....... ..|
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~------~~g 66 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ------SRV 66 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecccc------CCC
Confidence 3556666555667999999999999999999999998 999999999999999 99998764322 267
Q ss_pred cCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCc
Q 015455 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEV-EQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREP 359 (406)
Q Consensus 281 t~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (406)
|+.|+|||++.+.. ++.++|||||||++|||++|+.||...... ..+..+......... . ..
T Consensus 67 ~~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---------~-----~~-- 129 (176)
T smart00750 67 DPYFMAPEVIQGQS-YTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDP---------R-----DR-- 129 (176)
T ss_pred cccccChHHhcCCC-CcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCc---------c-----cc--
Confidence 99999999997754 899999999999999999999999765442 223333222111100 0 00
Q ss_pred hhhhhhhhcCCCCC--ChHHHHHHcccCCCCCCcCHHHHhcCcccc
Q 015455 360 YKRCIQETFKDFPP--SSLPLIETLLAIDPAERLTATVALNSEVSY 403 (406)
Q Consensus 360 ~~~~~~~~~~~~~~--~~~~li~~~L~~dP~~Rpta~elL~h~~f~ 403 (406)
.....+++ .+.++|..||+.||.+|||+.++++|+|+.
T Consensus 130 ------~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 130 ------SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred ------ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 00012333 699999999999999999999999999975
No 406
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=2.4e-29 Score=254.60 Aligned_cols=263 Identities=26% Similarity=0.325 Sum_probs=198.6
Q ss_pred ceeeeeccCCceEEEEEEEccCCcEEEEEEEe----cCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 119 EKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR----FDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 119 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~----~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
.....+|.|++|.|+.+........++.|..+ ...........+..|+-+-..+.|||++.....+.+... .+-
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~--~~~ 398 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDG--ILQ 398 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhccc--chh
Confidence 45678999999999988877777767777554 222222222236678888888999999888777665433 334
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC--
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK-- 272 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~-- 272 (406)
.||||+. .+..+......++..++..++.|++.|+.|||+.||.|||+||+|++++.+|.+||+|||.+..+.....
T Consensus 399 ~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~ 477 (601)
T KOG0590|consen 399 SMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKN 477 (601)
T ss_pred hhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchh
Confidence 4999999 5544555556899999999999999999999999999999999999999999999999999988754433
Q ss_pred -CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHHHhCCCCHHHhhhcCCCC
Q 015455 273 -HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLH-KIYKLCGSPSEEYWKKSKLPN 350 (406)
Q Consensus 273 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~ 350 (406)
......+|+..|+|||++.+...-....||||.|++++.|++|+.||......+... .+... ..
T Consensus 478 ~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~--------------~~ 543 (601)
T KOG0590|consen 478 IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYS--------------DQ 543 (601)
T ss_pred hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccc--------------cc
Confidence 445667899999999999887633457999999999999999999997654433221 00000 00
Q ss_pred cccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccccc
Q 015455 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQF 405 (406)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~~ 405 (406)
... .......+..++...+.+|..||+.||.+|.|++++++.+||++.
T Consensus 544 ~~~-------~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i 591 (601)
T KOG0590|consen 544 RNI-------FEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI 591 (601)
T ss_pred ccc-------ccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence 000 011122334678889999999999999999999999999999863
No 407
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.95 E-value=4.1e-27 Score=224.35 Aligned_cols=165 Identities=22% Similarity=0.244 Sum_probs=129.1
Q ss_pred ccCCcceeeeeccCCceEEEEEEEcc-CCcEEEEEEEecCCC---ChHHHHHHHHHHHHHhhCCCCCeee-EeeeeeecC
Q 015455 114 RADSFEKIDKIGQGTYSNVYKAKDML-TGKIVALKKVRFDNL---EPESVKFMAREILILRRLDHPNVIK-LEGLVTSRM 188 (406)
Q Consensus 114 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~-l~~~~~~~~ 188 (406)
..+.|.+.+.||+|+||+||+|++.. +++.||||++..... .......+.+|+++|++++|+|++. +++.
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----- 90 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----- 90 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc-----
Confidence 45789999999999999999998775 678889998753311 2334567889999999999999985 4331
Q ss_pred CceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC-CCCCeEEcCCCcEEEeeecccccc
Q 015455 189 SCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDI-KGSNLLIDDDGVLKIADFGLASFF 267 (406)
Q Consensus 189 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDl-kp~NIll~~~~~~kl~DFgla~~~ 267 (406)
...|+||||++|+.+.... .. . ...++.|++.||.|||+.||+|||| ||+|||++.++.+||+|||+|+.+
T Consensus 91 -~~~~LVmE~~~G~~L~~~~-~~---~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~ 162 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHLAR-PH---G---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVF 162 (365)
T ss_pred -CCcEEEEEccCCCCHHHhC-cc---c---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceec
Confidence 2379999999987665322 11 1 1467899999999999999999999 999999999999999999999977
Q ss_pred CCCCCCC-------CcCccccCccccccccc
Q 015455 268 DPNHKHP-------MTSRVVTLWYRPPELLL 291 (406)
Q Consensus 268 ~~~~~~~-------~~~~~gt~~y~aPE~~~ 291 (406)
....... .+...+++.|+|||.+.
T Consensus 163 ~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~ 193 (365)
T PRK09188 163 RRRGALYRIAAYEDLRHLLKHKRTYAPDALT 193 (365)
T ss_pred ccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence 5432111 13456788899999874
No 408
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.2e-29 Score=242.17 Aligned_cols=240 Identities=27% Similarity=0.397 Sum_probs=200.1
Q ss_pred eeccCCceEEEEEEE---ccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCC-CCCeeeEeeeeeecCCceEEEEEec
Q 015455 123 KIGQGTYSNVYKAKD---MLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD-HPNVIKLEGLVTSRMSCSLYLVFHY 198 (406)
Q Consensus 123 ~lg~G~~g~Vy~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~l~~~~~~~~~~~~~lv~e~ 198 (406)
.+|.|+||.|++++. ...|..||+|+..+.............|..++...+ ||.+|+++..+..+ ..+++++++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~--~kl~l~ld~ 78 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTD--GKLYLILDF 78 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccc--cchhHhhhh
Confidence 379999999998752 355778999988765442222225556888999996 99999998888774 459999999
Q ss_pred ccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCc
Q 015455 199 MEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR 278 (406)
Q Consensus 199 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~ 278 (406)
..++.+.........+.+...+.+...++.+++++|+.+|+|||+|++||+++.+|++++.|||+++..-.....
T Consensus 79 ~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~----- 153 (612)
T KOG0603|consen 79 LRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA----- 153 (612)
T ss_pred cccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc-----
Confidence 999888888888888999999999999999999999999999999999999999999999999999987544332
Q ss_pred cccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCC
Q 015455 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPRE 358 (406)
Q Consensus 279 ~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (406)
+||..|||||++.+ ...++|+||||++++||++|..||.+ +....|.+..-..+
T Consensus 154 cgt~eymApEI~~g---h~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p------------------- 207 (612)
T KOG0603|consen 154 CGTYEYRAPEIING---HLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMP------------------- 207 (612)
T ss_pred ccchhhhhhHhhhc---cCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCc-------------------
Confidence 89999999999873 67899999999999999999999998 66666665322222
Q ss_pred chhhhhhhhcCCCCCChHHHHHHcccCCCCCCcC-----HHHHhcCcccccc
Q 015455 359 PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT-----ATVALNSEVSYQF 405 (406)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----a~elL~h~~f~~~ 405 (406)
..++..+++++..++..+|..|.- +.++++|+||+.+
T Consensus 208 ----------~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i 249 (612)
T KOG0603|consen 208 ----------RELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSI 249 (612)
T ss_pred ----------hhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheee
Confidence 256778999999999999999975 5899999999864
No 409
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.94 E-value=3.2e-25 Score=209.23 Aligned_cols=261 Identities=34% Similarity=0.507 Sum_probs=201.6
Q ss_pred cceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChH-HHHHHHHHHHHHhhCCCC-CeeeEeeeeeecCCceEEEE
Q 015455 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE-SVKFMAREILILRRLDHP-NVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 118 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~~E~~~l~~l~h~-~iv~l~~~~~~~~~~~~~lv 195 (406)
|.+...||.|+||.||++.+. ..+++|.+........ ....+.+|+.++..+.|+ +++++.+.+.. ....+++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~ 76 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQD--EGSLYLV 76 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEec--CCEEEEE
Confidence 678899999999999999876 7899999876654332 567788899999999988 79999998855 3348999
Q ss_pred EecccccHHHHhcCCCC---CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCC-cEEEeeeccccccCCCC
Q 015455 196 FHYMEHDLAGLAASPEV---KFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNH 271 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-~~kl~DFgla~~~~~~~ 271 (406)
++++.++.+........ .++...+..++.|++.++.|+|+.+++|||+||+||+++..+ .++++|||++.......
T Consensus 77 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 77 MEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred EecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 99999866554444332 799999999999999999999999999999999999999988 79999999998665433
Q ss_pred CC-----CCcCccccCcccccccccCC--ccCCCccchHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHHhCCC-CH
Q 015455 272 KH-----PMTSRVVTLWYRPPELLLGA--TDYGVGVDLWSAGCILAELLAGKPIMPGRTE---VEQLHKIYKLCGSP-SE 340 (406)
Q Consensus 272 ~~-----~~~~~~gt~~y~aPE~~~~~--~~~~~~~DvwslGv~l~ell~g~~pf~~~~~---~~~~~~i~~~~~~~-~~ 340 (406)
.. ......||..|+|||.+.+. ..++...|+||+|++++++++|..||..... .............+ ..
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLA 236 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccc
Confidence 22 23567899999999998773 4588899999999999999999999887764 23333332222111 00
Q ss_pred HHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccc
Q 015455 341 EYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSY 403 (406)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~ 403 (406)
. .. ... .. ......+.+++..++..+|..|.+..+...+++..
T Consensus 237 ~--------~~---~~~--~~-------~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 279 (384)
T COG0515 237 S--------PL---SPS--NP-------ELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLA 279 (384)
T ss_pred c--------cc---Ccc--cc-------chhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhh
Confidence 0 00 000 00 11224688999999999999999999988886654
No 410
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=1.2e-25 Score=214.15 Aligned_cols=211 Identities=27% Similarity=0.301 Sum_probs=167.7
Q ss_pred CcceeeeeccCCceEEEEEEEccCC-cEEEEEEEecCCCChHHHHHHHHHHHHHhhCC----CCCeeeEeeeeeecCCce
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTG-KIVALKKVRFDNLEPESVKFMAREILILRRLD----HPNVIKLEGLVTSRMSCS 191 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~-~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~----h~~iv~l~~~~~~~~~~~ 191 (406)
+|.+.+.||+|+||.||+|.+..++ ..+|+|........... .+..|..++..+. .+++..+++... ....+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~--~l~~E~~vl~~l~~~~~~~~~~~~~~~G~-~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS--VLKIEIQVLKKLEKKNGPSHFPKLLDHGR-STEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc--cchhHHHHHHHHhhhcCCCCCCEEEEecc-CCCce
Confidence 7999999999999999999987664 57899987654322211 4556888888886 267888877664 23557
Q ss_pred EEEEEecccccHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCC-----CcEEEeeecccc
Q 015455 192 LYLVFHYMEHDLAGLAASP-EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDD-----GVLKIADFGLAS 265 (406)
Q Consensus 192 ~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~-----~~~kl~DFgla~ 265 (406)
-|+||+.++.+|.++.... ...|+...+..++.|++.+|.+||+.|++||||||+|+++... ..+.|.|||+++
T Consensus 96 ~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar 175 (322)
T KOG1164|consen 96 NFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR 175 (322)
T ss_pred eEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence 8999999999999987544 4789999999999999999999999999999999999999865 469999999998
Q ss_pred ccC---CCC---CCC---CcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015455 266 FFD---PNH---KHP---MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331 (406)
Q Consensus 266 ~~~---~~~---~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i 331 (406)
.+. ... ... .....||..|.++.++.+.. .+++.|+||++.++.+++.|..||.+........++
T Consensus 176 ~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e-~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~ 249 (322)
T KOG1164|consen 176 RFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIE-QGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKF 249 (322)
T ss_pred cccccCCCCcccccCCCCccCCCCccccccHHHhCCCc-cCCchhhhhHHHHHHHHhcCCCCCccccccchHHHH
Confidence 332 111 111 12345999999999988765 899999999999999999999999876654433333
No 411
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.93 E-value=1.9e-26 Score=234.13 Aligned_cols=222 Identities=31% Similarity=0.377 Sum_probs=171.7
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
++|+.++.|-.|+||.||+++++.+.+++|+| +.++.+ +.+ +++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l-------ilR--nilt~a~npfvv----------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL-------ILR--NILTFAGNPFVV----------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhc-ccccch-------hhh--ccccccCCccee-----------------
Confidence 68999999999999999999999999999994 443321 111 144444555555
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCC---
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--- 272 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~--- 272 (406)
|+-.. +...-++++.+ ++.+++|||+.||+|||+||+|.+|+.-|++|++|||+++.......
T Consensus 136 -----gDc~t-llk~~g~lPvd--------mvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl 201 (1205)
T KOG0606|consen 136 -----GDCAT-LLKNIGPLPVD--------MVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNL 201 (1205)
T ss_pred -----chhhh-hcccCCCCcch--------hhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchh
Confidence 22222 22333345543 38899999999999999999999999999999999999975421111
Q ss_pred ---------C--CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 015455 273 ---------H--PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 341 (406)
Q Consensus 273 ---------~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 341 (406)
+ .....+|||.|+|||++.... |+..+|||++|+|+||.+-|..||.+.+.++.+...+.....-++
T Consensus 202 ~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqg-ygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE- 279 (1205)
T KOG0606|consen 202 KEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQG-YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE- 279 (1205)
T ss_pred hhcchHHHHHHhhhccccCCccccChhhhhhhc-cCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccc-
Confidence 0 123458999999999998654 999999999999999999999999999999999888764332222
Q ss_pred HhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCc---CHHHHhcCcccccc
Q 015455 342 YWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERL---TATVALNSEVSYQF 405 (406)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---ta~elL~h~~f~~~ 405 (406)
.....+++++++|..+|..+|..|. .+.++-+|+||+.+
T Consensus 280 -------------------------~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~L 321 (1205)
T KOG0606|consen 280 -------------------------EDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLL 321 (1205)
T ss_pred -------------------------cCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeec
Confidence 1236789999999999999999995 68899999999853
No 412
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=1.7e-25 Score=193.08 Aligned_cols=210 Identities=23% Similarity=0.265 Sum_probs=170.5
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCC-CCeeeEeeeeeecCCceEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH-PNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~l~~~~~~~~~~~~~ 193 (406)
...|.++++||+|+||.+|+|....+|..||||.-+.... ..++..|..+.+.|++ ..|..+..+..+ ..+-.
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~----hpqL~yEskvY~iL~~g~GiP~i~~y~~e--~~ynv 87 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK----HPQLLYESKVYRILQGGVGIPHIRHYGTE--KDYNV 87 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC----CcchhHHHHHHHHhccCCCCchhhhhccc--cccce
Confidence 3689999999999999999999999999999998654332 2245668888888854 555555545544 45678
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCC---CcEEEeeeccccccCCC
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDD---GVLKIADFGLASFFDPN 270 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~---~~~kl~DFgla~~~~~~ 270 (406)
+||+.++.++-+++.-....|+...+..++-|++.-++|+|.+++|||||||+|+|..-+ ..+.|+|||||+.+...
T Consensus 88 lVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~ 167 (341)
T KOG1163|consen 88 LVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDI 167 (341)
T ss_pred eeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccc
Confidence 999999999999888777899999999999999999999999999999999999998643 46899999999987644
Q ss_pred CCC------CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015455 271 HKH------PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331 (406)
Q Consensus 271 ~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i 331 (406)
... ......||..|.+--...+.. -+.+.|+-|+|.+|....-|..||.|.......++.
T Consensus 168 ~t~~HIpyre~r~ltGTaRYASinAh~g~e-qSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKy 233 (341)
T KOG1163|consen 168 RTRQHIPYREDRNLTGTARYASINAHLGIE-QSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKY 233 (341)
T ss_pred cccccCccccCCccceeeeehhhhhhhhhh-hhhhhhhhhhcceeeeeecCCCcccccchhhHHHHH
Confidence 332 123457899999888776644 678999999999999999999999997765544433
No 413
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=1e-24 Score=196.29 Aligned_cols=214 Identities=22% Similarity=0.266 Sum_probs=175.6
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCceEEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~~~~l 194 (406)
-.|++.++||+|+||+.|.|++..+++.||||.-.... ..-++..|....+.| ..++|...+ +..+.+.+-.|
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS----~APQLrdEYr~YKlL~g~~GIP~vY--YFGqeG~~NiL 101 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS----EAPQLRDEYRTYKLLGGTEGIPQVY--YFGQEGKYNIL 101 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC----CcchHHHHHHHHHHHcCCCCCCcee--eeccccchhhh
Confidence 46999999999999999999999999999999654322 233566688888877 568888774 33444666789
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCC-----cEEEeeeccccccCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDG-----VLKIADFGLASFFDP 269 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-----~~kl~DFgla~~~~~ 269 (406)
|+|.++.+|-+++.-.+..|+...+..++.||+.-++|+|++.+|+|||||+|+||...+ .|.|+|||+|+.+..
T Consensus 102 VidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 102 VIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred hhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 999999999998888888999999999999999999999999999999999999997543 589999999998864
Q ss_pred CCCC------CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHhC
Q 015455 270 NHKH------PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRT---EVEQLHKIYKLCG 336 (406)
Q Consensus 270 ~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~---~~~~~~~i~~~~~ 336 (406)
.... ...+..||..||+--..+|.. -+.+.|.-|||-+++..+-|..||.|.. ..+.+++|-+...
T Consensus 182 p~TkqHIPYrE~KSLsGTARYMSINTHlGrE-QSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr 256 (449)
T KOG1165|consen 182 PKTKQHIPYREHKSLSGTARYMSINTHLGRE-QSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKR 256 (449)
T ss_pred ccccccCccccccccccceeeeEeeccccch-hhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccc
Confidence 4332 234567999999999888865 7889999999999999999999998754 4455555544433
No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.91 E-value=2.2e-24 Score=189.29 Aligned_cols=141 Identities=22% Similarity=0.256 Sum_probs=108.8
Q ss_pred eeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHH------------------------HHHHHHHHHHHhhCCCCC
Q 015455 121 IDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPES------------------------VKFMAREILILRRLDHPN 176 (406)
Q Consensus 121 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~------------------------~~~~~~E~~~l~~l~h~~ 176 (406)
...||+|+||.||+|.+. +|+.||||+++.+...... .....+|+.++.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 467999999999999975 8999999999765321111 122345999999998777
Q ss_pred eeeEeeeeeecCCceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCeeccCCCCCeEEcCCCc
Q 015455 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC-HNNGVLHRDIKGSNLLIDDDGV 255 (406)
Q Consensus 177 iv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~L-H~~~ivHrDlkp~NIll~~~~~ 255 (406)
+.....+... . .++||||++++.+.........+++..+..++.|++.+|.+| |+.||+||||||+|||++ ++.
T Consensus 81 v~~p~~~~~~--~--~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 81 IPCPEPILLK--S--HVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCCcEEEec--C--CEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCc
Confidence 6443222211 2 389999999865433322345789999999999999999999 799999999999999998 578
Q ss_pred EEEeeecccccc
Q 015455 256 LKIADFGLASFF 267 (406)
Q Consensus 256 ~kl~DFgla~~~ 267 (406)
++|+|||+|...
T Consensus 156 v~LiDFG~a~~~ 167 (190)
T cd05147 156 LYIIDVSQSVEH 167 (190)
T ss_pred EEEEEccccccC
Confidence 999999999754
No 415
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.90 E-value=3.4e-24 Score=196.14 Aligned_cols=238 Identities=22% Similarity=0.291 Sum_probs=152.5
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC-ChHHHHHHHHHHHHHhhCCC----------CCeeeEeeee
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDH----------PNVIKLEGLV 184 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h----------~~iv~l~~~~ 184 (406)
..+.....||.|+++.||.+++..+|+.+|+|+...... .....+.+.+|.-....+.+ -.++..++..
T Consensus 12 r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~ 91 (288)
T PF14531_consen 12 RTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLL 91 (288)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEE
T ss_pred eEEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEE
Confidence 356778899999999999999999999999999875543 23356667766655554322 1222222222
Q ss_pred ee----------cCCc-----eEEEEEecccccHHHHhc---C-CC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 015455 185 TS----------RMSC-----SLYLVFHYMEHDLAGLAA---S-PE--VKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDI 243 (406)
Q Consensus 185 ~~----------~~~~-----~~~lv~e~~~~~l~~~~~---~-~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDl 243 (406)
.. .+.. ..+++|+-+.+++..... . .. ..+.......+..|+++.+++||+.|++|+||
T Consensus 92 ~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 92 RIPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp EETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EEcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 11 1011 247788888887766432 1 11 12233344556689999999999999999999
Q ss_pred CCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCccccCcccccccccCC-------ccCCCccchHHHHHHHHHHHhCC
Q 015455 244 KGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA-------TDYGVGVDLWSAGCILAELLAGK 316 (406)
Q Consensus 244 kp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~~DvwslGv~l~ell~g~ 316 (406)
+|+|+|++.+|.++|+||+.....+.... ....+..|.+||..... ..++.+.|.|+||+++|.|.||+
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~~----~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~ 247 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTRYR----CSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGR 247 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEEEE----GGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCceee----ccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHcc
Confidence 99999999999999999998876543211 13446779999976332 23788999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCC
Q 015455 317 PIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAER 390 (406)
Q Consensus 317 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 390 (406)
.||........... .-..+.++|+.+++||..||+.||.+|
T Consensus 248 lPf~~~~~~~~~~~---------------------------------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 248 LPFGLSSPEADPEW---------------------------------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp -STCCCGGGSTSGG---------------------------------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCCCccccccc---------------------------------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 99986532111000 011223788899999999999999988
No 416
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.90 E-value=1.6e-23 Score=186.24 Aligned_cols=173 Identities=14% Similarity=0.161 Sum_probs=130.1
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCh-HHHHH------HHHHHHHHhhCCCCCeeeEeeeeeecC
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEP-ESVKF------MAREILILRRLDHPNVIKLEGLVTSRM 188 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~------~~~E~~~l~~l~h~~iv~l~~~~~~~~ 188 (406)
++|+.++.||.|+||.||++.. ++..+|+|.++...... ..... +.+|+..+.++.|++|..+.+++....
T Consensus 31 ~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 31 YNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred CceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 6899999999999999999754 57789999997554322 22222 578999999999999999988866432
Q ss_pred ------CceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeec
Q 015455 189 ------SCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFG 262 (406)
Q Consensus 189 ------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFg 262 (406)
....+++|||++|..+.... .+++ ....+++.+|..||+.|++|||+||+||+++.+| ++|+|||
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg 179 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMP----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLS 179 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhh----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECC
Confidence 23579999999985444332 2333 2456999999999999999999999999999988 9999999
Q ss_pred cccccCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHH
Q 015455 263 LASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELL 313 (406)
Q Consensus 263 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell 313 (406)
........... . .+... ..|+.++|+||||+++....
T Consensus 180 ~~~~~~e~~a~---d----------~~vle-r~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 180 GKRCTAQRKAK---D----------RIDLE-RHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CcccccchhhH---H----------HHHHH-hHhcccccccceeEeehHHH
Confidence 88755322110 0 02233 23778999999999986554
No 417
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.90 E-value=3.9e-23 Score=181.83 Aligned_cols=142 Identities=23% Similarity=0.290 Sum_probs=111.2
Q ss_pred eeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCh------------------------HHHHHHHHHHHHHhhCCCCC
Q 015455 121 IDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEP------------------------ESVKFMAREILILRRLDHPN 176 (406)
Q Consensus 121 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~------------------------~~~~~~~~E~~~l~~l~h~~ 176 (406)
...||+|+||.||+|++. +|+.||||+++...... .....+.+|...+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 467999999999999976 89999999998653210 01223457899999999998
Q ss_pred eeeEeeeeeecCCceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCCeEEcCCCc
Q 015455 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN-NGVLHRDIKGSNLLIDDDGV 255 (406)
Q Consensus 177 iv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~ 255 (406)
+.....+... . .|+||||++++...........++...+..++.|++.+|.+||+ .||+||||||+|||++ ++.
T Consensus 81 i~~p~~~~~~--~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~ 155 (190)
T cd05145 81 VPVPEPILLK--K--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGK 155 (190)
T ss_pred CCCceEEEec--C--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCC
Confidence 7554443332 1 48999999986322211223467889999999999999999999 9999999999999998 899
Q ss_pred EEEeeeccccccC
Q 015455 256 LKIADFGLASFFD 268 (406)
Q Consensus 256 ~kl~DFgla~~~~ 268 (406)
++|+|||++....
T Consensus 156 ~~liDFG~a~~~~ 168 (190)
T cd05145 156 PYIIDVSQAVELD 168 (190)
T ss_pred EEEEEcccceecC
Confidence 9999999998764
No 418
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=8.6e-23 Score=177.91 Aligned_cols=190 Identities=17% Similarity=0.145 Sum_probs=140.5
Q ss_pred ceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC--hHHHHHHHHHHHHHhhCC-CCCeeeEeeeeeecCCceEEEE
Q 015455 119 EKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--PESVKFMAREILILRRLD-HPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 119 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~l~~~~~~~~~~~~~lv 195 (406)
.+...|++|+||+||.+. ..+.+++.+.+...... .-....+.+|+++|++|. |+++++++++ ...+++
T Consensus 5 ~~~~~l~~~~f~~v~~~~--~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~------~~~~lv 76 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVR--GGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW------DGRHLD 76 (218)
T ss_pred ccceeecCCCcceEEEee--cCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE------cCEEEE
Confidence 456789999999999885 47778887777654431 112235778999999995 5889988775 226999
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC-CCCCeEEcCCCcEEEeeeccccccCCCCCC-
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDI-KGSNLLIDDDGVLKIADFGLASFFDPNHKH- 273 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDl-kp~NIll~~~~~~kl~DFgla~~~~~~~~~- 273 (406)
|+|+.|..+..... .. ...++.|++.+|.++|++||+|||| ||+|||++.++.++|+|||+|.........
T Consensus 77 meyI~G~~L~~~~~------~~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~ 149 (218)
T PRK12274 77 RSYLAGAAMYQRPP------RG-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWM 149 (218)
T ss_pred EeeecCccHHhhhh------hh-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHH
Confidence 99999876543221 11 1357789999999999999999999 799999999999999999999865433210
Q ss_pred ---C--------CcCccccCcccccccccCCccCC-CccchHHHHHHHHHHHhCCCCCCCCC
Q 015455 274 ---P--------MTSRVVTLWYRPPELLLGATDYG-VGVDLWSAGCILAELLAGKPIMPGRT 323 (406)
Q Consensus 274 ---~--------~~~~~gt~~y~aPE~~~~~~~~~-~~~DvwslGv~l~ell~g~~pf~~~~ 323 (406)
. ..-...++.|++|+.-.-....+ ...++++-|+-+|.++|++.++.+.+
T Consensus 150 r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 150 RLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 0 00113478888888654322233 56799999999999999998876554
No 419
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.89 E-value=3.9e-23 Score=190.12 Aligned_cols=192 Identities=26% Similarity=0.376 Sum_probs=140.6
Q ss_pred CCCCeeeEeeeeeec-------------------------CCceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHH
Q 015455 173 DHPNVIKLEGLVTSR-------------------------MSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLL 227 (406)
Q Consensus 173 ~h~~iv~l~~~~~~~-------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~ 227 (406)
+|||||++.++|.+. ....+|+||-...+++..++..+ ..+....+-++.|++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~--~~s~r~~~~~laQlL 351 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTR--HRSYRTGRVILAQLL 351 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcC--CCchHHHHHHHHHHH
Confidence 599999998877541 12358999999999999887665 456677788899999
Q ss_pred HHHHHHHHCCCeeccCCCCCeEEc--CCC--cEEEeeeccccccCCC-----CCCCCcCccccCcccccccccCCccC--
Q 015455 228 SGLEHCHNNGVLHRDIKGSNLLID--DDG--VLKIADFGLASFFDPN-----HKHPMTSRVVTLWYRPPELLLGATDY-- 296 (406)
Q Consensus 228 ~aL~~LH~~~ivHrDlkp~NIll~--~~~--~~kl~DFgla~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~-- 296 (406)
+|+.|||++||.|||+|.+|||+. +++ .+.|+|||.+---+.. ........-|.-..||||+....+..
T Consensus 352 Eav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~a 431 (598)
T KOG4158|consen 352 EAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNA 431 (598)
T ss_pred HHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCce
Confidence 999999999999999999999984 333 5789999987432211 11112334567788999987543221
Q ss_pred ---CCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCC
Q 015455 297 ---GVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPP 373 (406)
Q Consensus 297 ---~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (406)
-.++|.|+.|.+.||++....||.+.-+...-. ..+.+.++| .....+|+
T Consensus 432 vvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~-----------r~Yqe~qLP----------------alp~~vpp 484 (598)
T KOG4158|consen 432 VVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDT-----------RTYQESQLP----------------ALPSRVPP 484 (598)
T ss_pred eeccchhhhhhhhhhHHHHhccCCcccccchheech-----------hhhhhhhCC----------------CCcccCCh
Confidence 138899999999999999999998743221111 111222222 22347889
Q ss_pred ChHHHHHHcccCCCCCCcCH
Q 015455 374 SSLPLIETLLAIDPAERLTA 393 (406)
Q Consensus 374 ~~~~li~~~L~~dP~~Rpta 393 (406)
.+++++..+|+.||++|+++
T Consensus 485 ~~rqlV~~lL~r~pskRvsp 504 (598)
T KOG4158|consen 485 VARQLVFDLLKRDPSKRVSP 504 (598)
T ss_pred HHHHHHHHHhcCCccccCCc
Confidence 99999999999999999984
No 420
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.89 E-value=1.3e-23 Score=213.88 Aligned_cols=248 Identities=26% Similarity=0.359 Sum_probs=178.1
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCC--CChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDN--LEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~l 194 (406)
+|...+.||++.|=+|.+|++ ..|. |+||++-+.. ..-....+...|+. ...+++||++++.-+... ....||
T Consensus 24 e~~~~~~LGstRFlKv~r~k~-~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t--~kAAyl 98 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKD-REGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVT--DKAAYL 98 (1431)
T ss_pred ceeeecccCchhhhhhhhccC-CCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHh--hHHHHH
Confidence 578889999999999999985 5565 8899986543 23333444455666 666799999998665444 334789
Q ss_pred EEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeecccccc--CCCCC
Q 015455 195 VFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF--DPNHK 272 (406)
Q Consensus 195 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~--~~~~~ 272 (406)
|-+|..++|.+.+..+ ..+..-+-+.|+.|++.||..+|..||+|+|||.+||||+.-+-+.|+||..-+.. .+++.
T Consensus 99 vRqyvkhnLyDRlSTR-PFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNP 177 (1431)
T KOG1240|consen 99 VRQYVKHNLYDRLSTR-PFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNP 177 (1431)
T ss_pred HHHHHhhhhhhhhccc-hHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCc
Confidence 9999999988865543 36778888999999999999999999999999999999999999999999876432 22211
Q ss_pred CCCcCc----cccCcccccccccCCc----------cCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCC
Q 015455 273 HPMTSR----VVTLWYRPPELLLGAT----------DYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGS 337 (406)
Q Consensus 273 ~~~~~~----~gt~~y~aPE~~~~~~----------~~~~~~DvwslGv~l~ell~-g~~pf~~~~~~~~~~~i~~~~~~ 337 (406)
...+-+ .--.+|+|||.+.... ..+++.||||+||++.||++ |++||.-. ++-........
T Consensus 178 adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS----QL~aYr~~~~~ 253 (1431)
T KOG1240|consen 178 ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS----QLLAYRSGNAD 253 (1431)
T ss_pred ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH----HHHhHhccCcc
Confidence 111111 1244699999985421 15678999999999999987 78998521 11111110000
Q ss_pred CCHHHhhhcCCCCcccCCCCCchhhhhhhhcCC-CCCChHHHHHHcccCCCCCCcCHHHHhcC
Q 015455 338 PSEEYWKKSKLPNATLFKPREPYKRCIQETFKD-FPPSSLPLIETLLAIDPAERLTATVALNS 399 (406)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpta~elL~h 399 (406)
.++ ..... -+..++++|..|++.||++|.+|++.|+-
T Consensus 254 ~~e-------------------------~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 254 DPE-------------------------QLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred CHH-------------------------HHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 000 01111 23478999999999999999999999985
No 421
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.88 E-value=1.7e-23 Score=183.80 Aligned_cols=255 Identities=17% Similarity=0.219 Sum_probs=195.4
Q ss_pred cccccCCCCcccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeee
Q 015455 104 GEALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGL 183 (406)
Q Consensus 104 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~ 183 (406)
...++.+......+..++.+|.....|..|+|+ ..|..+++|++..........+.|..|.-.|+-+.||||+.+++.
T Consensus 178 datlsr~~gid~~~lnl~tkl~e~hsgelwrgr--wqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlga 255 (448)
T KOG0195|consen 178 DATLSRYTGIDVSSLNLITKLAESHSGELWRGR--WQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGA 255 (448)
T ss_pred ccccccccCcchhhhhhhhhhccCCCccccccc--ccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhh
Confidence 344555555556778888999999999999997 456667889887777666667778889999999999999999999
Q ss_pred eeecCCceEEEEEecccccHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCCeEEcCCCcEEEe
Q 015455 184 VTSRMSCSLYLVFHYMEHDLAGLAA--SPEVKFTEPQVKCYMHQLLSGLEHCHNNG--VLHRDIKGSNLLIDDDGVLKIA 259 (406)
Q Consensus 184 ~~~~~~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~kl~ 259 (406)
|..+. .+.++..||+.+.+.... ..+...+..++.+++.+|+.|++|||+.. |-.--|....+++|++-+.+|+
T Consensus 256 cnspp--nlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris 333 (448)
T KOG0195|consen 256 CNSPP--NLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS 333 (448)
T ss_pred ccCCC--CceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee
Confidence 98864 489999999976555333 33445678899999999999999999984 4444688999999999887764
Q ss_pred --eeccccccCCCCCCCCcCccccCcccccccccCCccC--CCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Q 015455 260 --DFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDY--GVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLC 335 (406)
Q Consensus 260 --DFgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~--~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~ 335 (406)
|--++- .......+|.|++||.+...+.. -.++|+|||.+++|||.|...||....+.+.-.+|.-
T Consensus 334 mad~kfsf--------qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkial-- 403 (448)
T KOG0195|consen 334 MADTKFSF--------QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIAL-- 403 (448)
T ss_pred cccceeee--------eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhh--
Confidence 322111 11234558999999998754321 2589999999999999999999999888776655532
Q ss_pred CCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHh
Q 015455 336 GSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397 (406)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL 397 (406)
..+-...++.+++.+..|+.-|++.||.+||..+.++
T Consensus 404 -------------------------eglrv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 404 -------------------------EGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred -------------------------ccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 1112233467888899999999999999999987653
No 422
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.87 E-value=2.6e-23 Score=198.45 Aligned_cols=178 Identities=29% Similarity=0.424 Sum_probs=125.8
Q ss_pred EEEEEecccccHHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccC
Q 015455 192 LYLVFHYMEHDLAGLAASP---EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD 268 (406)
Q Consensus 192 ~~lv~e~~~~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~ 268 (406)
+|+.|++|....+..++.+ ....+......++.|++.|+.| ++.+|||+||.||++..+..+||+|||+.....
T Consensus 331 lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~ 407 (516)
T KOG1033|consen 331 LYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQD 407 (516)
T ss_pred hhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeecc
Confidence 4555566655444433321 2345677888999999999999 999999999999999999999999999998765
Q ss_pred CCC-----CCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHh
Q 015455 269 PNH-----KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYW 343 (406)
Q Consensus 269 ~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 343 (406)
... ....+..+||.+||+||++.+.. |+.++||||||++|+|++.- |.. ..+.....-. +
T Consensus 408 ~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~-y~~kvdIyaLGlil~EL~~~---f~T--~~er~~t~~d---------~ 472 (516)
T KOG1033|consen 408 KDETVAPAAASHTQQVGTLLYMSPEQIRGQQ-YSEKVDIYALGLILAELLIQ---FST--QFERIATLTD---------I 472 (516)
T ss_pred cCCcccchhhhhhhcccccccCCHHHHhhhh-hhhhcchhhHHHHHHHHHHH---hcc--HHHHHHhhhh---------h
Confidence 444 22345678999999999999865 99999999999999999972 111 1111111111 0
Q ss_pred hhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccc
Q 015455 344 KKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSY 403 (406)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~ 403 (406)
....+|. .+..=-+.-.+|+.+||.+.|.+||++.+.--|.|.+
T Consensus 473 r~g~ip~----------------~~~~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~~ 516 (516)
T KOG1033|consen 473 RDGIIPP----------------EFLQDYPEEYTLLQQLLSPSPEERPSAIEVALHEFLQ 516 (516)
T ss_pred hcCCCCh----------------HHhhcCcHHHHHHHHhcCCCcccCchHHHHhhhhhcC
Confidence 1111110 0001124457899999999999999888887777753
No 423
>smart00090 RIO RIO-like kinase.
Probab=99.84 E-value=1.2e-20 Score=171.10 Aligned_cols=146 Identities=25% Similarity=0.214 Sum_probs=113.4
Q ss_pred CCcceeeeeccCCceEEEEEE-EccCCcEEEEEEEecCCCCh----------------------HHHHHHHHHHHHHhhC
Q 015455 116 DSFEKIDKIGQGTYSNVYKAK-DMLTGKIVALKKVRFDNLEP----------------------ESVKFMAREILILRRL 172 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~-~~~~~~~vaiK~~~~~~~~~----------------------~~~~~~~~E~~~l~~l 172 (406)
.-|++.+.||+|+||.||+|. +..+|+.||+|+++...... .....+.+|+.++.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 358899999999999999998 66899999999997643210 0113456799999999
Q ss_pred CCCC--eeeEeeeeeecCCceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-CeeccCCCCCeE
Q 015455 173 DHPN--VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG-VLHRDIKGSNLL 249 (406)
Q Consensus 173 ~h~~--iv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIl 249 (406)
.+.. +.++++. . ..++||||+++..+.........+....+..++.||+.+|.+||+.| ++||||||+||+
T Consensus 108 ~~~~i~~p~~~~~---~---~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIl 181 (237)
T smart00090 108 YEAGVPVPKPIAW---R---RNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNIL 181 (237)
T ss_pred HhcCCCCCeeeEe---c---CceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEE
Confidence 7533 3333332 1 24899999999655443333445677778899999999999999999 999999999999
Q ss_pred EcCCCcEEEeeeccccccC
Q 015455 250 IDDDGVLKIADFGLASFFD 268 (406)
Q Consensus 250 l~~~~~~kl~DFgla~~~~ 268 (406)
++ ++.++|+|||++...+
T Consensus 182 i~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 182 VH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred EE-CCCEEEEEChhhhccC
Confidence 99 8899999999987543
No 424
>PRK10345 hypothetical protein; Provisional
Probab=99.84 E-value=3.1e-20 Score=164.64 Aligned_cols=137 Identities=18% Similarity=0.239 Sum_probs=104.3
Q ss_pred ceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-----CCCCeeeEeeeeeecCC-ceE
Q 015455 119 EKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-----DHPNVIKLEGLVTSRMS-CSL 192 (406)
Q Consensus 119 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~l~~~~~~~~~-~~~ 192 (406)
.-.+.||+|+||.||. +..++.. +||++...... ..+.+.+|+.+++.+ +||||++++|++.+..+ +.+
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~--~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v 79 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDG--GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV 79 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCe-EEEEEeccccc--hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence 3457899999999995 6667666 69998764322 345688999999999 67999999999987543 343
Q ss_pred E-EEEeccc--c-cHHHHhcCCCCCCCHHHHHHHHHHHHHHH-HHHHHCCCeeccCCCCCeEEcC----CCcEEEeeecc
Q 015455 193 Y-LVFHYME--H-DLAGLAASPEVKFTEPQVKCYMHQLLSGL-EHCHNNGVLHRDIKGSNLLIDD----DGVLKIADFGL 263 (406)
Q Consensus 193 ~-lv~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL-~~LH~~~ivHrDlkp~NIll~~----~~~~kl~DFgl 263 (406)
+ +|+||.+ + +|.+++.+ . .+++. ..++.|++.++ +|||+++|+||||||+|||++. ++.++|+||+.
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~-~-~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQ-C-RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred EEEEecCCCCcchhHHHHHHc-c-cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 4 7899954 4 55555533 2 46666 35678888888 9999999999999999999974 34799999554
Q ss_pred c
Q 015455 264 A 264 (406)
Q Consensus 264 a 264 (406)
+
T Consensus 156 ~ 156 (210)
T PRK10345 156 E 156 (210)
T ss_pred C
Confidence 4
No 425
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.81 E-value=5.9e-20 Score=190.42 Aligned_cols=195 Identities=24% Similarity=0.295 Sum_probs=148.2
Q ss_pred ccCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCC---CCCeeeEeeeeeecCCc
Q 015455 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD---HPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 114 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~l~~~~~~~~~~ 190 (406)
..+.|.|.+.||+|+||+||+|.+.. |+.||+|+-+...... ... =.+++.+|+ -+.|..+...+.....
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE----fYI-~~q~~~RLk~~~~~~~~~~~~a~~~~~~- 768 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE----FYI-CLQVMERLKPQMLPSIMHISSAHVFQNA- 768 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee----eee-hHHHHHhhchhhhcchHHHHHHHccCCc-
Confidence 35779999999999999999999744 9999999876554321 111 234444444 2334444444333323
Q ss_pred eEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcC-------CCcEEEeeecc
Q 015455 191 SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD-------DGVLKIADFGL 263 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~-------~~~~kl~DFgl 263 (406)
-++|++|.+.|.+-.+.+..+.+++..++.++.||+..++.||..+|||+||||+|+||.. ..-++|+|||-
T Consensus 769 -S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~ 847 (974)
T KOG1166|consen 769 -SVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGR 847 (974)
T ss_pred -ceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEeccc
Confidence 6899999997655555557778999999999999999999999999999999999999952 34599999999
Q ss_pred ccccCCCCC-CCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCC
Q 015455 264 ASFFDPNHK-HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKP 317 (406)
Q Consensus 264 a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~ 317 (406)
+..+.--.. ......++|-.+-.+|...|.. |+..+|.|.|+.+++-|++|+.
T Consensus 848 siDm~lfp~~~~F~~~~~td~f~C~EM~~grp-WtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 848 SIDMKLFPDGTKFKAVWHTDLFDCIEMREGRP-WTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred ceeeeEcCCCcEEeeeeccccchhHHHhcCCC-CchhhhhHHHHHHHHHHHHHHH
Confidence 865532111 1245567899999999887755 9999999999999999999973
No 426
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.79 E-value=1.1e-18 Score=154.68 Aligned_cols=140 Identities=24% Similarity=0.226 Sum_probs=107.5
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCh--------------------HHHHHHHHHHHHHhhCCCCC
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEP--------------------ESVKFMAREILILRRLDHPN 176 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--------------------~~~~~~~~E~~~l~~l~h~~ 176 (406)
.|.+.+.||+|+||.||++.. .+|+.||||+++.+.... ........|..++..+.+++
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALD-PDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhhcCCccccCcceEEEEEEc-CCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 478889999999999999986 589999999987543110 01123567888898887774
Q ss_pred --eeeEeeeeeecCCceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCC
Q 015455 177 --VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDG 254 (406)
Q Consensus 177 --iv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~ 254 (406)
+...++ .+..+++|||+++..+...... .....++.+++.++.++|+.|++||||||+||++++++
T Consensus 95 i~v~~~~~------~~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~ 162 (198)
T cd05144 95 FPVPKPID------WNRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDE 162 (198)
T ss_pred CCCCceee------cCCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCC
Confidence 343332 1235899999998665433221 34567889999999999999999999999999999999
Q ss_pred cEEEeeeccccccCC
Q 015455 255 VLKIADFGLASFFDP 269 (406)
Q Consensus 255 ~~kl~DFgla~~~~~ 269 (406)
.++|+|||++.....
T Consensus 163 ~~~liDfg~~~~~~~ 177 (198)
T cd05144 163 KIYIIDWPQMVSTDH 177 (198)
T ss_pred cEEEEECCccccCCC
Confidence 999999999976543
No 427
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.78 E-value=7.5e-21 Score=192.96 Aligned_cols=263 Identities=27% Similarity=0.388 Sum_probs=201.9
Q ss_pred CCcceeeeeccCCceEEEEEEEcc-CCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCC-CCCeeeEeeeeeecCCceEE
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDML-TGKIVALKKVRFDNLEPESVKFMAREILILRRLD-HPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~l~~~~~~~~~~~~~ 193 (406)
..|.+.+.||+|+|+.|-...... ....+|+|.+...............|..+-..+. |+|++.+++...+. ...+
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~--~~~~ 97 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSP--RSYL 97 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCC--cccc
Confidence 568888999999999998887533 3346677766544333444555666888877776 99999998887764 4588
Q ss_pred EEEecccccHHHHhc-CCCC-CCCHHHHHHHHHHHHHHHHHHH-HCCCeeccCCCCCeEEcCCC-cEEEeeeccccccCC
Q 015455 194 LVFHYMEHDLAGLAA-SPEV-KFTEPQVKCYMHQLLSGLEHCH-NNGVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDP 269 (406)
Q Consensus 194 lv~e~~~~~l~~~~~-~~~~-~~~~~~~~~~~~qi~~aL~~LH-~~~ivHrDlkp~NIll~~~~-~~kl~DFgla~~~~~ 269 (406)
+.++|..++.+.... ..+. ..+...+..++.|+..++.|+| ..++.|||+||+|.+++..+ .+++.|||+|..+..
T Consensus 98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 999998886666555 5554 7788889999999999999999 99999999999999999999 999999999988765
Q ss_pred --CCCCCCcCccc-cCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhc
Q 015455 270 --NHKHPMTSRVV-TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS 346 (406)
Q Consensus 270 --~~~~~~~~~~g-t~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 346 (406)
+........+| ++.|+|||...+....++..|+||.|+++.-+++|..|+...........- |...
T Consensus 178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~-----------~~~~ 246 (601)
T KOG0590|consen 178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSS-----------WKSN 246 (601)
T ss_pred cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccccee-----------eccc
Confidence 22222344678 999999999887555678999999999999999999998765443311000 0000
Q ss_pred CCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 347 KLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
+ .......+..++....+++.++|..+|..|.+.+++-.++|+..
T Consensus 247 ~-------------~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 247 K-------------GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred c-------------cccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 0 01112233578889999999999999999999999999999864
No 428
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=1.8e-18 Score=154.69 Aligned_cols=136 Identities=19% Similarity=0.246 Sum_probs=107.1
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCChH------HHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE------SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~------~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
+.||+|++|.||+|+. +|..+++|+......... ....+.+|+.++..+.|+++.....++... ...+++
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~--~~~~lv 77 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP--ENFIIV 77 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC--CCCEEE
Confidence 5789999999999975 778899998654332111 224577899999999999887766665543 347899
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccc
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASF 266 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~ 266 (406)
|||++|..+....... .. ....++.+++.+|.+||+.|++|+|++|.|||++ ++.++|+|||++..
T Consensus 78 ~e~~~G~~L~~~~~~~---~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 78 MEYIEGEPLKDLINSN---GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEEeCCcCHHHHHHhc---cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999885544333322 12 7889999999999999999999999999999999 88999999999875
No 429
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.77 E-value=1.2e-18 Score=169.56 Aligned_cols=205 Identities=27% Similarity=0.418 Sum_probs=152.4
Q ss_pred HhhCCCCCeeeEeeeeeecCCceEEEEEecccc-cHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-eeccCCCC
Q 015455 169 LRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGV-LHRDIKGS 246 (406)
Q Consensus 169 l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i-vHrDlkp~ 246 (406)
|+.+.|.|+.+++|.+.+. ...++|.+||.. ++.+.+......+++--...++++|+.||+|||+..| .|+.+++.
T Consensus 1 l~~l~h~n~~~f~g~~~~~--~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~ 78 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG--PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSS 78 (484)
T ss_pred CcccchhhhhhheeeEecC--CceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccc
Confidence 4578999999999999885 558999999986 5566666667789999999999999999999999866 99999999
Q ss_pred CeEEcCCCcEEEeeeccccccCCC-CCCCCcCccccCcccccccccCCc--c----CCCccchHHHHHHHHHHHhCCCCC
Q 015455 247 NLLIDDDGVLKIADFGLASFFDPN-HKHPMTSRVVTLWYRPPELLLGAT--D----YGVGVDLWSAGCILAELLAGKPIM 319 (406)
Q Consensus 247 NIll~~~~~~kl~DFgla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~--~----~~~~~DvwslGv~l~ell~g~~pf 319 (406)
|.+++..+.+||+|||+....... .........-..-|.|||.+.+.. . .+.+.||||||++++|+++...||
T Consensus 79 nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~ 158 (484)
T KOG1023|consen 79 NCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPF 158 (484)
T ss_pred cceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcc
Confidence 999999999999999998876421 001111122355689999886531 1 356799999999999999999999
Q ss_pred CCCChH----HHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHH
Q 015455 320 PGRTEV----EQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATV 395 (406)
Q Consensus 320 ~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e 395 (406)
...... +....+.+ .+.. +++..+.... .+++++..+++.|+..+|.+||++++
T Consensus 159 ~~~~~~~~~~eii~~~~~-~~~~--------------------~~rP~i~~~~-e~~~~l~~l~~~cw~e~P~~rPs~~~ 216 (484)
T KOG1023|consen 159 DLRNLVEDPDEIILRVKK-GGSN--------------------PFRPSIELLN-ELPPELLLLVARCWEEIPEKRPSIEQ 216 (484)
T ss_pred ccccccCChHHHHHHHHh-cCCC--------------------CcCcchhhhh-hcchHHHHHHHHhcccChhhCccHHH
Confidence 763322 23333222 0110 0111111111 45668999999999999999999887
Q ss_pred Hh
Q 015455 396 AL 397 (406)
Q Consensus 396 lL 397 (406)
+-
T Consensus 217 i~ 218 (484)
T KOG1023|consen 217 IR 218 (484)
T ss_pred HH
Confidence 63
No 430
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.76 E-value=5.6e-18 Score=150.09 Aligned_cols=133 Identities=18% Similarity=0.224 Sum_probs=101.2
Q ss_pred eeccCCceEEEEEEEccCCcEEEEEEEecCCCCh------HHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEE
Q 015455 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEP------ESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 123 ~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~------~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~ 196 (406)
.||+|+||.||+|. .+|..+++|......... .....+.+|++++..+.|+++.....++... ...+++|
T Consensus 1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~--~~~~lv~ 76 (199)
T TIGR03724 1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDP--DNKTIVM 76 (199)
T ss_pred CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC--CCCEEEE
Confidence 38999999999997 577889999865432211 1235567899999999887655444344432 2368999
Q ss_pred ecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeecccccc
Q 015455 197 HYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF 267 (406)
Q Consensus 197 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~ 267 (406)
||++|..+......... .++.|++.+|.+||+.|++|+|++|.||+++ ++.++++|||++...
T Consensus 77 e~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 77 EYIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred EEECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 99988655443332211 7889999999999999999999999999999 899999999998753
No 431
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.75 E-value=9.1e-18 Score=147.20 Aligned_cols=138 Identities=27% Similarity=0.279 Sum_probs=97.4
Q ss_pred eeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHH----------------------HHHHHHHHhhCCCCC--
Q 015455 121 IDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF----------------------MAREILILRRLDHPN-- 176 (406)
Q Consensus 121 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~----------------------~~~E~~~l~~l~h~~-- 176 (406)
.+.||+|+||.||+|.+. +|+.||||+++........... ...|...+..+.+..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999875 8999999998764322111111 134566666654432
Q ss_pred eeeEeeeeeecCCceEEEEEecccccHHH-HhcCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCCeEEcCCC
Q 015455 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHCHN-NGVLHRDIKGSNLLIDDDG 254 (406)
Q Consensus 177 iv~l~~~~~~~~~~~~~lv~e~~~~~l~~-~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~ 254 (406)
+.+++++ ...+++|||++++... ...... ... ..++.++.+++.++.++|. .||+|+||||+||+++ ++
T Consensus 81 ~~~~~~~------~~~~lv~e~~~g~~~~~~~l~~~-~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 81 VPKPIDL------NRHVLVMEFIGGDGIPAPRLKDV-RLL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DG 151 (187)
T ss_pred CCceEec------CCCEEEEEEeCCCCccChhhhhh-hhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CC
Confidence 3333332 1258999999983211 111100 111 6778999999999999999 9999999999999999 99
Q ss_pred cEEEeeeccccccC
Q 015455 255 VLKIADFGLASFFD 268 (406)
Q Consensus 255 ~~kl~DFgla~~~~ 268 (406)
.++|+|||.+....
T Consensus 152 ~~~liDfg~a~~~~ 165 (187)
T cd05119 152 KVYIIDVPQAVEID 165 (187)
T ss_pred cEEEEECccccccc
Confidence 99999999997553
No 432
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.74 E-value=2.2e-17 Score=167.79 Aligned_cols=139 Identities=17% Similarity=0.177 Sum_probs=106.3
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC------hHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCC
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE------PESVKFMAREILILRRLDHPNVIKLEGLVTSRMS 189 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~ 189 (406)
..|...+.||+|+||+||+|... +..+++|+....... ....+.+.+|++++..++|++++....++...
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-- 408 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP-- 408 (535)
T ss_pred cccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC--
Confidence 34567899999999999999753 344555543222111 11235678899999999999998876666553
Q ss_pred ceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeecccccc
Q 015455 190 CSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF 267 (406)
Q Consensus 190 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~ 267 (406)
...++||||++++.+..... ....++.|++.+|.+||+.|++||||||+|||+ .++.++|+|||+++..
T Consensus 409 ~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 409 EEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred CCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 34689999999865543332 457789999999999999999999999999999 6789999999999764
No 433
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.72 E-value=3.6e-18 Score=166.33 Aligned_cols=255 Identities=23% Similarity=0.281 Sum_probs=201.2
Q ss_pred CCcceeeeecc--CCceEEEEEEE--ccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeeecCCc
Q 015455 116 DSFEKIDKIGQ--GTYSNVYKAKD--MLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSC 190 (406)
Q Consensus 116 ~~y~~~~~lg~--G~~g~Vy~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~~ 190 (406)
..|.+...+|+ |.+|.||.+.. ..++..+|+|.-+.-.........-.+|+...+.+ .|+|.++.+..+.. .+
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~--~~ 191 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG--SG 191 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccccc--CC
Confidence 56788899999 99999999987 78899999997433222222222333566666666 48999997777766 55
Q ss_pred eEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHH----HHHHHHHCCCeeccCCCCCeEEcCC-CcEEEeeecccc
Q 015455 191 SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLS----GLEHCHNNGVLHRDIKGSNLLIDDD-GVLKIADFGLAS 265 (406)
Q Consensus 191 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~----aL~~LH~~~ivHrDlkp~NIll~~~-~~~kl~DFgla~ 265 (406)
.+|+-+|+++..+..+.......++...++..+.+... ||.++|+.+++|-|+||.||+...+ ...+++|||+..
T Consensus 192 ~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~ 271 (524)
T KOG0601|consen 192 ILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVS 271 (524)
T ss_pred cceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeE
Confidence 69999999999999999888888999999999999999 9999999999999999999999999 889999999999
Q ss_pred ccCCCCCCCC----cCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHHHHhCCCC
Q 015455 266 FFDPNHKHPM----TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGR--TEVEQLHKIYKLCGSPS 339 (406)
Q Consensus 266 ~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~--~~~~~~~~i~~~~~~~~ 339 (406)
.+........ ....|..-|++||...+. ++..+|+|++|.+..+..+|..++... +.+.++..++ .
T Consensus 272 ~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l--~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~-----i- 343 (524)
T KOG0601|consen 272 KISDGNFSSVFKVSKRPEGDCIYAAKELLNGL--ATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY-----I- 343 (524)
T ss_pred EccCCccccceeeeecCCCCceEeChhhhccc--cchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc-----C-
Confidence 8876553221 122567889999988763 789999999999999999988776554 3333333322 0
Q ss_pred HHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 340 EEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
-.+.....+.++...+..|++.||..|+++..+++++++.+
T Consensus 344 ------------------------p~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s 384 (524)
T KOG0601|consen 344 ------------------------PLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS 384 (524)
T ss_pred ------------------------chhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence 11222355666777999999999999999999999998764
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.69 E-value=3e-16 Score=142.70 Aligned_cols=137 Identities=20% Similarity=0.264 Sum_probs=101.5
Q ss_pred eeec-cCCceEEEEEEEccCCcEEEEEEEecCCC-----------ChHHHHHHHHHHHHHhhCCCCCe--eeEeeeeeec
Q 015455 122 DKIG-QGTYSNVYKAKDMLTGKIVALKKVRFDNL-----------EPESVKFMAREILILRRLDHPNV--IKLEGLVTSR 187 (406)
Q Consensus 122 ~~lg-~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----------~~~~~~~~~~E~~~l~~l~h~~i--v~l~~~~~~~ 187 (406)
..|| .||.|+||.+.. .+..++||.+..... +......+.+|++++..++|+++ +..+++...+
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4577 788899999864 477899998854221 11233467789999999988775 6666664433
Q ss_pred CCc--eEEEEEecccc--cHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeecc
Q 015455 188 MSC--SLYLVFHYMEH--DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGL 263 (406)
Q Consensus 188 ~~~--~~~lv~e~~~~--~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgl 263 (406)
... ..++|||++++ ++...+.. ..+++.. +.||+.+|.+||+.||+||||||.|||++.++.++|+|||.
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~--~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~ 188 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE--APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDR 188 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc--CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCC
Confidence 222 23599999996 44444332 2455543 56899999999999999999999999999999999999998
Q ss_pred ccc
Q 015455 264 ASF 266 (406)
Q Consensus 264 a~~ 266 (406)
+..
T Consensus 189 ~~~ 191 (239)
T PRK01723 189 GEL 191 (239)
T ss_pred ccc
Confidence 865
No 435
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.65 E-value=1e-15 Score=128.44 Aligned_cols=132 Identities=24% Similarity=0.248 Sum_probs=107.8
Q ss_pred eeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCC--CCeeeEeeeeeecCCceEEEEEe
Q 015455 120 KIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH--PNVIKLEGLVTSRMSCSLYLVFH 197 (406)
Q Consensus 120 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~l~~~~~~~~~~~~~lv~e 197 (406)
+++.||+|.++.||++.. ++..+++|....... ...+.+|+.++..+++ .++++++++.... ...+++||
T Consensus 2 ~~~~i~~g~~~~v~~~~~--~~~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~--~~~~~v~e 73 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGT--KDEDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESD--GWSYLLME 73 (155)
T ss_pred cceecccccccceEEEEe--cCCeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC--CccEEEEE
Confidence 457899999999999985 337899998765432 3457789999999976 5888887776653 56899999
Q ss_pred cccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCCCCCeEEcCCCcEEEeeeccccc
Q 015455 198 YMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN---GVLHRDIKGSNLLIDDDGVLKIADFGLASF 266 (406)
Q Consensus 198 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFgla~~ 266 (406)
|+.+...... +......++.+++.+|++||.. +++|+|++|.||+++..+.++++|||++..
T Consensus 74 ~~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 74 WIEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 9987654422 5667778899999999999985 699999999999999989999999998864
No 436
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.64 E-value=2.5e-17 Score=168.36 Aligned_cols=261 Identities=24% Similarity=0.250 Sum_probs=198.3
Q ss_pred cCCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCC-CChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEE
Q 015455 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDN-LEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 115 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~ 193 (406)
.+.+.+.+-+-+|.++.++.+.-..+|...++|...... +.....+....+-+++-...+|.++...--+.. ....+
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~--rsP~~ 880 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPC--RSPLP 880 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCC--CCCcc
Confidence 477888999999999999999877778777777654332 122223444455555555677877766433333 34589
Q ss_pred EEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC---
Q 015455 194 LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN--- 270 (406)
Q Consensus 194 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~--- 270 (406)
++++|.+++.+...++.-+..+.+-++.++..+..+++|||...+.|||++|.|+|...+++.+++|||+....+-.
T Consensus 881 L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~ 960 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPT 960 (1205)
T ss_pred hhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCc
Confidence 99999987555545555556788888999999999999999999999999999999999999999999844322100
Q ss_pred ---------------------------CCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 015455 271 ---------------------------HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRT 323 (406)
Q Consensus 271 ---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~ 323 (406)
.........+|+.|.+||...+.. .+..+|+|++|++++|.++|.+||....
T Consensus 961 ~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~-hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen 961 TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRR-HGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred CCcccccccCccccccccccccccccchhhccccccCCCcccCCccccccc-CCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence 001123456899999999988865 7889999999999999999999999999
Q ss_pred hHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHH---HHhcCc
Q 015455 324 EVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTAT---VALNSE 400 (406)
Q Consensus 324 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~---elL~h~ 400 (406)
....+++|...-.. +..-....++.+++++..+|..+|.+|..+. ++-.|+
T Consensus 1040 pq~~f~ni~~~~~~--------------------------~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~ 1093 (1205)
T KOG0606|consen 1040 PQQIFENILNRDIP--------------------------WPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHP 1093 (1205)
T ss_pred hhhhhhccccCCCC--------------------------CCCCccccChhhhhhhhhhhccCchhccCcccccccccCC
Confidence 98888777552111 1112235788899999999999999999988 999999
Q ss_pred cccc
Q 015455 401 VSYQ 404 (406)
Q Consensus 401 ~f~~ 404 (406)
||+.
T Consensus 1094 ~~~~ 1097 (1205)
T KOG0606|consen 1094 FFQD 1097 (1205)
T ss_pred ccCC
Confidence 9985
No 437
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.49 E-value=2.8e-13 Score=118.18 Aligned_cols=140 Identities=19% Similarity=0.201 Sum_probs=99.0
Q ss_pred eeeccCCceEEEEEEEcc------CCcEEEEEEEecCCC--------------------ChHHHHHHH----HHHHHHhh
Q 015455 122 DKIGQGTYSNVYKAKDML------TGKIVALKKVRFDNL--------------------EPESVKFMA----REILILRR 171 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~------~~~~vaiK~~~~~~~--------------------~~~~~~~~~----~E~~~l~~ 171 (406)
..||.|--+.||.|.... .+..+|||+.+.... .......+. +|...|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999997533 357999998764210 011122233 79999998
Q ss_pred CCC--CCeeeEeeeeeecCCceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCeeccCCCCCe
Q 015455 172 LDH--PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC-HNNGVLHRDIKGSNL 248 (406)
Q Consensus 172 l~h--~~iv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~L-H~~~ivHrDlkp~NI 248 (406)
+.. -++.+++++ . .-++||||++++.+....-.+..++...+..+..|++.+|..| |+.|++|+||++.||
T Consensus 83 l~~~Gv~vP~pi~~--~----~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NI 156 (197)
T cd05146 83 MQKAGIPCPEVVVL--K----KHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNM 156 (197)
T ss_pred HHHcCCCCCeEEEe--c----CCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence 843 445555543 1 2589999998742211111223456667778889999999998 899999999999999
Q ss_pred EEcCCCcEEEeeeccccccC
Q 015455 249 LIDDDGVLKIADFGLASFFD 268 (406)
Q Consensus 249 ll~~~~~~kl~DFgla~~~~ 268 (406)
|++ ++.+.|+|||.+...+
T Consensus 157 L~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 157 LWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred EEE-CCcEEEEECCCceeCC
Confidence 996 5789999999887653
No 438
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.49 E-value=1.1e-14 Score=142.20 Aligned_cols=258 Identities=20% Similarity=0.221 Sum_probs=185.0
Q ss_pred CCCCcccCCcceeeeeccCCceEEEEEEEc-cCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeeeEeeeeee
Q 015455 109 GWIPRRADSFEKIDKIGQGTYSNVYKAKDM-LTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTS 186 (406)
Q Consensus 109 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~ 186 (406)
.|......+|..+..||.|.|+.|+.+... .++..|++|.+............-..|+.+...+ .|.+++.....+..
T Consensus 258 ~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~ 337 (524)
T KOG0601|consen 258 DWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ 337 (524)
T ss_pred ccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccc
Confidence 344445678999999999999999998654 6788999998866544433333344577776666 58888887666655
Q ss_pred cCCceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCC-CcEEEeeecccc
Q 015455 187 RMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDD-GVLKIADFGLAS 265 (406)
Q Consensus 187 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~-~~~kl~DFgla~ 265 (406)
-.. .|+-.|||++........-...+.+...+++..|++.++.++|+..++|+|+||+||++..+ +..+++|||...
T Consensus 338 ~r~--~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t 415 (524)
T KOG0601|consen 338 LRQ--GYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWT 415 (524)
T ss_pred ccc--ccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhcccccccc
Confidence 333 56999999886666554444467888999999999999999999999999999999999876 788999999886
Q ss_pred ccCCCCCCCCcCccccCccc-ccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhh
Q 015455 266 FFDPNHKHPMTSRVVTLWYR-PPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344 (406)
Q Consensus 266 ~~~~~~~~~~~~~~gt~~y~-aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 344 (406)
.+.-. .......-++. .+|.+.....+..+.|++|||..+.+.++|.+.-...+... .|..
T Consensus 416 ~~~~~----~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~---~i~~----------- 477 (524)
T KOG0601|consen 416 RLAFS----SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSL---TIRS----------- 477 (524)
T ss_pred cccee----cccccccccccccchhhccccccccccccccccccccccccCcccCcccccce---eeec-----------
Confidence 43111 11223344455 35556555568889999999999999999985443322211 1111
Q ss_pred hcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 345 KSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
...+ ..+....+++.+.+.+...|+..||.+.++..|.-|.+
T Consensus 478 -~~~p-----------------~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 478 -GDTP-----------------NLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred -cccc-----------------CCCchHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 0001 01233467788999999999999999999988876653
No 439
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.47 E-value=5.5e-14 Score=127.38 Aligned_cols=205 Identities=17% Similarity=0.182 Sum_probs=141.2
Q ss_pred HHHHhhCCCCCeeeEeeeeeecC---CceEEEEEecccccHHHH----hcCCCCCCCHHHHHHHHHHHHHHHHHHHHC--
Q 015455 166 ILILRRLDHPNVIKLEGLVTSRM---SCSLYLVFHYMEHDLAGL----AASPEVKFTEPQVKCYMHQLLSGLEHCHNN-- 236 (406)
Q Consensus 166 ~~~l~~l~h~~iv~l~~~~~~~~---~~~~~lv~e~~~~~l~~~----~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-- 236 (406)
..-|-++-|-|||+++.|+.+.. .....+++|||..+.+.. .......+.....++|+.||+.||.|||+.
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~P 197 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCC
Confidence 44556678999999999987632 245789999998754432 234556789999999999999999999998
Q ss_pred CCeeccCCCCCeEEcCCCcEEEeeeccccccCC---CCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHH
Q 015455 237 GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDP---NHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELL 313 (406)
Q Consensus 237 ~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~---~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell 313 (406)
-|+|+++....|++..+|-+|++--........ ..........+.++|.|||.=... +.+-++|||+||....+|.
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~t-n~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTT-NTTGASDIYKFGMCALEMA 276 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCccc-ccccchhhhhhhHHHHHHH
Confidence 599999999999999999999852211111000 000011223457889999965432 3667999999999999999
Q ss_pred hCCCCC-CCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCC-CCChHHHHHHcccCCCCCCc
Q 015455 314 AGKPIM-PGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDF-PPSSLPLIETLLAIDPAERL 391 (406)
Q Consensus 314 ~g~~pf-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rp 391 (406)
-|..-- .+......-..|..... .. .+.-+++|.+||+..|..||
T Consensus 277 ilEiq~tnseS~~~~ee~ia~~i~---------------------------------~len~lqr~~i~kcl~~eP~~rp 323 (458)
T KOG1266|consen 277 ILEIQSTNSESKVEVEENIANVII---------------------------------GLENGLQRGSITKCLEGEPNGRP 323 (458)
T ss_pred HheeccCCCcceeehhhhhhhhee---------------------------------eccCccccCcCcccccCCCCCCc
Confidence 887432 22221111122211100 11 12235689999999999999
Q ss_pred CHHHHhcCccccc
Q 015455 392 TATVALNSEVSYQ 404 (406)
Q Consensus 392 ta~elL~h~~f~~ 404 (406)
++.++|.||-+..
T Consensus 324 ~ar~llfHpllfe 336 (458)
T KOG1266|consen 324 DARLLLFHPLLFE 336 (458)
T ss_pred chhhhhcCceeee
Confidence 9999999998764
No 440
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.46 E-value=1.4e-12 Score=128.75 Aligned_cols=169 Identities=20% Similarity=0.315 Sum_probs=125.7
Q ss_pred EEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEecccccHHHHhcCCCCC
Q 015455 134 KAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVK 213 (406)
Q Consensus 134 ~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~ 213 (406)
.|..+.++.+|.|...+.... .......+-+..|+.++||||+++++.+... ..+|+|+|.+..-... +. .
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~--~~~ylvTErV~Pl~~~-lk----~ 100 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEEE--GTLYLVTERVRPLETV-LK----E 100 (690)
T ss_pred ccceeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhccc--CceEEEeeccccHHHH-HH----H
Confidence 455578889999998876543 3445566788999999999999999988774 4699999988652211 11 1
Q ss_pred CCHHHHHHHHHHHHHHHHHHH-HCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCccccCcccccccccC
Q 015455 214 FTEPQVKCYMHQLLSGLEHCH-NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292 (406)
Q Consensus 214 ~~~~~~~~~~~qi~~aL~~LH-~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 292 (406)
+....+..-+.||+.||.||| +.+++|++|.-..|+|++.|..||++|.++........ +.....---.|..|+.+..
T Consensus 101 l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~ 179 (690)
T KOG1243|consen 101 LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDP 179 (690)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCc
Confidence 226667778899999999998 56899999999999999999999999999876543321 1112222334677775532
Q ss_pred CccCCCccchHHHHHHHHHHHhC
Q 015455 293 ATDYGVGVDLWSAGCILAELLAG 315 (406)
Q Consensus 293 ~~~~~~~~DvwslGv~l~ell~g 315 (406)
-+-..|.|.|||++++++.|
T Consensus 180 ---s~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 180 ---SEWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred ---cccchhhhhHHHHHHHHhCc
Confidence 12467999999999999999
No 441
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.46 E-value=3e-13 Score=133.42 Aligned_cols=142 Identities=19% Similarity=0.226 Sum_probs=93.6
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCChH--------------------------------HH------HHHH
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE--------------------------------SV------KFMA 163 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~--------------------------------~~------~~~~ 163 (406)
+.||+|++|.||+|+. .+|+.||||+.+.+....- .. -.+.
T Consensus 123 ~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 5699999999999985 6899999999875421100 00 0133
Q ss_pred HHHHHHhhC----CCCCeeeEeeeeeecCCceEEEEEecccccHHHHhcC-CCCCCCHHHHHHHHHHHHH-HHHHHHHCC
Q 015455 164 REILILRRL----DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEPQVKCYMHQLLS-GLEHCHNNG 237 (406)
Q Consensus 164 ~E~~~l~~l----~h~~iv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~-aL~~LH~~~ 237 (406)
+|...+.++ ++.+-+.+-.++.+. ....++||||++|..+..... ...... ...++.+++. .+..+|..|
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g 277 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDR-TSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDG 277 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhh-cCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCC
Confidence 455444444 233333333333322 233689999999854432221 111122 2345555655 478899999
Q ss_pred CeeccCCCCCeEEcCCCcEEEeeeccccccC
Q 015455 238 VLHRDIKGSNLLIDDDGVLKIADFGLASFFD 268 (406)
Q Consensus 238 ivHrDlkp~NIll~~~~~~kl~DFgla~~~~ 268 (406)
++|+|++|.||+++.++.++++|||++..+.
T Consensus 278 ~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 278 FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 9999999999999999999999999998765
No 442
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.43 E-value=1.1e-13 Score=138.26 Aligned_cols=145 Identities=19% Similarity=0.261 Sum_probs=94.3
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC--------------------------------hHHHHHHH
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--------------------------------PESVKFMA 163 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--------------------------------~~~~~~~~ 163 (406)
.+|+. +.||+|++|.||+|+...+|+.||||+++++... .+..+.+.
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 45776 7899999999999998777999999999764210 01112222
Q ss_pred ------HHHHHHhhCC----CCCeeeEeeeeeecCCceEEEEEecccccHHHHh---cCCCC---CCCHHHHHHHHHHHH
Q 015455 164 ------REILILRRLD----HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLA---ASPEV---KFTEPQVKCYMHQLL 227 (406)
Q Consensus 164 ------~E~~~l~~l~----h~~iv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~---~~~~~---~~~~~~~~~~~~qi~ 227 (406)
+|...+.+++ +.+.+.+-.++.+- ....++||||+.|.-.... ...+. .+.+..+..++.|++
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~-st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif 277 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDY-CSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF 277 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeeccc-CCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 3333333331 33333333333321 2346899999998544322 11111 244444555555554
Q ss_pred HHHHHHHHCCCeeccCCCCCeEEcCCC----cEEEeeeccccccCC
Q 015455 228 SGLEHCHNNGVLHRDIKGSNLLIDDDG----VLKIADFGLASFFDP 269 (406)
Q Consensus 228 ~aL~~LH~~~ivHrDlkp~NIll~~~~----~~kl~DFgla~~~~~ 269 (406)
..|++|+|+||.||+++.++ .++++|||++..++.
T Consensus 278 -------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 278 -------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred -------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 58999999999999999888 999999999987653
No 443
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.41 E-value=9e-13 Score=113.40 Aligned_cols=128 Identities=16% Similarity=0.150 Sum_probs=92.5
Q ss_pred eeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCee-eEeeeeeecCCceEEEEEecc
Q 015455 121 IDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVI-KLEGLVTSRMSCSLYLVFHYM 199 (406)
Q Consensus 121 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv-~l~~~~~~~~~~~~~lv~e~~ 199 (406)
++.|+.|.++.||+++. .+..|++|....... ....+.+|+.++..+.+.+++ +++..... ..++||||+
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~----~~~lv~e~i 73 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFDPE----TGVLITEFI 73 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEeCC----CCeEEEEec
Confidence 46788999999999974 478899998754321 122356788898888654443 44433221 247999999
Q ss_pred cccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-----eeccCCCCCeEEcCCCcEEEeeeccccc
Q 015455 200 EHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGV-----LHRDIKGSNLLIDDDGVLKIADFGLASF 266 (406)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i-----vHrDlkp~NIll~~~~~~kl~DFgla~~ 266 (406)
+|..+... ......++.+++.+|+.||+.++ +|+|++|.||+++ ++.++++|||.+..
T Consensus 74 ~G~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 74 EGSELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred CCCccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 98654321 01123456799999999999985 9999999999998 67899999998753
No 444
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.28 E-value=1.4e-10 Score=111.61 Aligned_cols=212 Identities=20% Similarity=0.268 Sum_probs=152.9
Q ss_pred ceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeec--CCceEEEEEecccc--cHH
Q 015455 129 YSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSR--MSCSLYLVFHYMEH--DLA 204 (406)
Q Consensus 129 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~--~~~~~~lv~e~~~~--~l~ 204 (406)
-.+.|++....+|..|++|+++.+....-. ....-+++.+++.|.|+|++.++|... ....+++|++|.++ .|.
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~n--k~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTN--KDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcc--cchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHH
Confidence 357899999999999999999544332111 122357899999999999999988621 24568999999986 455
Q ss_pred HHhcC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCC
Q 015455 205 GLAAS--------------PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270 (406)
Q Consensus 205 ~~~~~--------------~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~ 270 (406)
+.+.. .+...++..+|.++.|+..||.++|+.|...+-|.|.+||++.+.+++|+.-|....+..+
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 54322 2335789999999999999999999999999999999999999989999887777665443
Q ss_pred CCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHHHhCCCCHHHhhhcCC
Q 015455 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVE--QLHKIYKLCGSPSEEYWKKSKL 348 (406)
Q Consensus 271 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~ 348 (406)
.. |-+.+ -.+-|.=.||.+++.|.||..--...+... .+..|.
T Consensus 447 ~~---------------~~le~----~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~---------------- 491 (655)
T KOG3741|consen 447 PT---------------EPLES----QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRIT---------------- 491 (655)
T ss_pred CC---------------cchhH----HhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhh----------------
Confidence 31 11322 236799999999999999974322111111 122221
Q ss_pred CCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhc
Q 015455 349 PNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398 (406)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~ 398 (406)
+.++.+++++|.-+....+.+ -++.+++.
T Consensus 492 --------------------~~yS~D~rn~v~yl~s~~~~~-ksI~~llp 520 (655)
T KOG3741|consen 492 --------------------TTYSTDLRNVVEYLESLNFRE-KSIQDLLP 520 (655)
T ss_pred --------------------hhhhHHHHHHHHHHHhcCccc-ccHHHHHH
Confidence 356777888888888887776 56666654
No 445
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.22 E-value=5.2e-12 Score=125.29 Aligned_cols=154 Identities=22% Similarity=0.304 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHC-CCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCc--------CccccCcccccccccCCcc
Q 015455 225 QLLSGLEHCHNN-GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMT--------SRVVTLWYRPPELLLGATD 295 (406)
Q Consensus 225 qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~--------~~~gt~~y~aPE~~~~~~~ 295 (406)
+++.||.|+|.. ++||++|.|++|.++.++..||+.|+++....+....+.. ...-...|.|||++.+..
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~- 185 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTT- 185 (700)
T ss_pred cccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcccc-
Confidence 455999999976 8999999999999999999999999998766542221111 012367799999998744
Q ss_pred CCCccchHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCC
Q 015455 296 YGVGVDLWSAGCILAELL-AGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPS 374 (406)
Q Consensus 296 ~~~~~DvwslGv~l~ell-~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (406)
.+.++|+||+||++|.+. .|+..+.+.........-....+ .. ....-..+|++
T Consensus 186 ~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~--------------~~-----------~~~~s~~~p~e 240 (700)
T KOG2137|consen 186 NTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLN--------------AG-----------AFGYSNNLPSE 240 (700)
T ss_pred ccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccc--------------cc-----------cccccccCcHH
Confidence 788999999999999998 56666655543332222111100 00 00111478999
Q ss_pred hHHHHHHcccCCCCCCcCHHHHhcCccccc
Q 015455 375 SLPLIETLLAIDPAERLTATVALNSEVSYQ 404 (406)
Q Consensus 375 ~~~li~~~L~~dP~~Rpta~elL~h~~f~~ 404 (406)
+++=|.++|..|+..||++.+++..+||.+
T Consensus 241 l~~~l~k~l~~~~~~rp~~~~l~~~~ff~D 270 (700)
T KOG2137|consen 241 LRESLKKLLNGDSAVRPTLDLLLSIPFFSD 270 (700)
T ss_pred HHHHHHHHhcCCcccCcchhhhhcccccCC
Confidence 999999999999999999999999999985
No 446
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.21 E-value=1.9e-10 Score=97.30 Aligned_cols=134 Identities=21% Similarity=0.230 Sum_probs=91.3
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCC-----Ch-HHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEE
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-----EP-ESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv 195 (406)
..+++|+-+.+|.+.. -|..+++|.-..... +. -..+...+|+.++..++--.|....=+..++. ...++
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~--~~~I~ 77 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPD--NGLIV 77 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCC--CCEEE
Confidence 3578899999999853 455566774322222 11 12345667999998885433332222333432 26799
Q ss_pred EecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeecccccc
Q 015455 196 FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF 267 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~ 267 (406)
|||++|.++....... ...++..+-.-+.-||..||+|+||.++||+++.++ +.++||||+..-
T Consensus 78 me~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 78 MEYIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred EEEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 9999998777443332 145666777778889999999999999999997655 999999999753
No 447
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.19 E-value=2e-10 Score=103.15 Aligned_cols=142 Identities=20% Similarity=0.246 Sum_probs=103.5
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCC--CeeeEeeeeeecC-CceEEEEEec
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP--NVIKLEGLVTSRM-SCSLYLVFHY 198 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~--~iv~l~~~~~~~~-~~~~~lv~e~ 198 (406)
+.|+.|..+.||+++. .+|..|++|........ .....+.+|++++..+.+. ++.+++.+..... .+..+++|||
T Consensus 4 ~~l~~G~~n~~~~v~~-~~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~ 81 (223)
T cd05154 4 RQLSGGQSNLTYLLTA-GGGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER 81 (223)
T ss_pred eecCCCccceEEEEEe-cCCcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence 5689999999999985 44688999987544321 1234577899999999753 3556665544321 1246899999
Q ss_pred ccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC------------------------------------------
Q 015455 199 MEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN------------------------------------------ 236 (406)
Q Consensus 199 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~------------------------------------------ 236 (406)
++|..+...... ..+++.+...++.+++.+|..||+.
T Consensus 82 i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 82 VDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred eCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 998655433321 3577778888888888888888842
Q ss_pred --------------CCeeccCCCCCeEEcC--CCcEEEeeeccccc
Q 015455 237 --------------GVLHRDIKGSNLLIDD--DGVLKIADFGLASF 266 (406)
Q Consensus 237 --------------~ivHrDlkp~NIll~~--~~~~kl~DFgla~~ 266 (406)
.++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 3599999999999998 66789999998764
No 448
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.16 E-value=5.6e-10 Score=94.10 Aligned_cols=144 Identities=17% Similarity=0.246 Sum_probs=100.4
Q ss_pred eeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC------ChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEE
Q 015455 120 KIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL------EPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 120 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~ 193 (406)
.+..|-+|+-+.|+++. ..|+.+.||.--...+ .+-...+..+|+.+|.++.--.|.-..=++.+... -.
T Consensus 11 ~l~likQGAEArv~~~~--~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~--~~ 86 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGS--FSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYG--GQ 86 (229)
T ss_pred cceeeeccceeeEeeec--cCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCC--Ce
Confidence 56778899999999995 7888888885322221 12234567789999988753333222224444222 46
Q ss_pred EEEecccc--cHHHHhcCCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCC---cEEEeeecccccc
Q 015455 194 LVFHYMEH--DLAGLAASPEVK-FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDG---VLKIADFGLASFF 267 (406)
Q Consensus 194 lv~e~~~~--~l~~~~~~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~---~~kl~DFgla~~~ 267 (406)
+.|||++| ...+++...... ........++++|-..+.-||..+|+|+||..+||++..++ .+.++|||++...
T Consensus 87 i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 87 IYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 89999998 555555433222 23333378899999999999999999999999999997655 4689999998654
No 449
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.13 E-value=3.9e-10 Score=98.06 Aligned_cols=127 Identities=26% Similarity=0.317 Sum_probs=82.0
Q ss_pred EEEEEEEccCCcEEEEEEEecCCC------------------------ChHHHHHHHHHHHHHhhCCCC--CeeeEeeee
Q 015455 131 NVYKAKDMLTGKIVALKKVRFDNL------------------------EPESVKFMAREILILRRLDHP--NVIKLEGLV 184 (406)
Q Consensus 131 ~Vy~~~~~~~~~~vaiK~~~~~~~------------------------~~~~~~~~~~E~~~l~~l~h~--~iv~l~~~~ 184 (406)
.||.|.. .+|..+|+|+.+.... .........+|.+.|.++... ++.+++++
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~- 78 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY- 78 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE-
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE-
Confidence 4899985 7888999998764210 011234566799999999765 45555443
Q ss_pred eecCCceEEEEEeccc--ccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHH-HHHCCCeeccCCCCCeEEcCCCcEEEeee
Q 015455 185 TSRMSCSLYLVFHYME--HDLAGLAASPEVKFTEPQVKCYMHQLLSGLEH-CHNNGVLHRDIKGSNLLIDDDGVLKIADF 261 (406)
Q Consensus 185 ~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~-LH~~~ivHrDlkp~NIll~~~~~~kl~DF 261 (406)
.+ -++||||++ |..+..+... .++......++.+++..+.. +|+.||+|+||.+.|||++++ .+.|+||
T Consensus 79 -~~----~~ivME~I~~~G~~~~~l~~~--~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf 150 (188)
T PF01163_consen 79 -NR----NVIVMEYIGEDGVPLPRLKDV--DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDF 150 (188)
T ss_dssp -ET----TEEEEE--EETTEEGGCHHHC--GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--G
T ss_pred -eC----CEEEEEecCCCccchhhHHhc--cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEec
Confidence 21 379999999 6433333221 11134556777788885555 579999999999999999887 9999999
Q ss_pred cccccc
Q 015455 262 GLASFF 267 (406)
Q Consensus 262 gla~~~ 267 (406)
|.+...
T Consensus 151 ~qav~~ 156 (188)
T PF01163_consen 151 GQAVDS 156 (188)
T ss_dssp TTEEET
T ss_pred Ccceec
Confidence 988754
No 450
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.05 E-value=6.4e-09 Score=98.02 Aligned_cols=258 Identities=15% Similarity=0.135 Sum_probs=153.4
Q ss_pred ceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhC-CCCCeee-E---eee-eeecCCceE
Q 015455 119 EKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIK-L---EGL-VTSRMSCSL 192 (406)
Q Consensus 119 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~-l---~~~-~~~~~~~~~ 192 (406)
...+.||+|+-+.+|-.- .-+. .+.|+++..... ...+ -+..|... .||-+-. + ... +-.+.+...
T Consensus 14 ~~gr~LgqGgea~ly~l~--e~~d-~VAKIYh~Pppa--~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~i 85 (637)
T COG4248 14 PPGRPLGQGGEADLYTLG--EVRD-QVAKIYHAPPPA--AQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVI 85 (637)
T ss_pred CCCccccCCccceeeecc--hhhc-hhheeecCCCch--HHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCcccee
Confidence 345679999999999763 2222 345877654321 1111 23334444 4554332 1 111 111222235
Q ss_pred EEEEecccc--cHHHHh-----cCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeecccc
Q 015455 193 YLVFHYMEH--DLAGLA-----ASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS 265 (406)
Q Consensus 193 ~lv~e~~~~--~l~~~~-----~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~ 265 (406)
-+.|..+.+ ....++ .+.-..+.|+-+.+.++.++.+.+.||..|.+-+|+.++|+|+++++.+.|.|-..-.
T Consensus 86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq 165 (637)
T COG4248 86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQ 165 (637)
T ss_pred EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEccccee
Confidence 677877765 222222 2333467899999999999999999999999999999999999999999999855433
Q ss_pred ccCCCCCCCCcCccccCccccccccc-C---CccCCCccchHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhCCCCH
Q 015455 266 FFDPNHKHPMTSRVVTLWYRPPELLL-G---ATDYGVGVDLWSAGCILAELLAG-KPIMPGRTEVEQLHKIYKLCGSPSE 340 (406)
Q Consensus 266 ~~~~~~~~~~~~~~gt~~y~aPE~~~-~---~~~~~~~~DvwslGv~l~ell~g-~~pf~~~~~~~~~~~i~~~~~~~~~ 340 (406)
....+ ......+|...|.+||.-. + ...-+..+|-|.||+++++++.| +.||.|...... ...|-+
T Consensus 166 i~~ng--~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~-------ap~p~E 236 (637)
T COG4248 166 INANG--TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISD-------APNPLE 236 (637)
T ss_pred eccCC--ceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCC-------CCCcch
Confidence 32211 1234467899999999643 1 11235689999999999999987 899987431100 000001
Q ss_pred HHhhhcCCCCcccCCCCCchh-hhhhhhcCCCCCChHHHHHHcccC--CCCCCcCHHH
Q 015455 341 EYWKKSKLPNATLFKPREPYK-RCIQETFKDFPPSSLPLIETLLAI--DPAERLTATV 395 (406)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~--dP~~Rpta~e 395 (406)
.......+..... ...+++ ......+.-++++++.|..+|+.. ++.-|||++.
T Consensus 237 ~~Ia~g~f~ya~~--~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a 292 (637)
T COG4248 237 TDIAHGRFAYASD--QRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA 292 (637)
T ss_pred hhhhcceeeechh--ccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence 0111111111100 000000 011112235788999999999986 3568999764
No 451
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.04 E-value=5.6e-09 Score=96.19 Aligned_cols=135 Identities=18% Similarity=0.158 Sum_probs=90.5
Q ss_pred eEEEEEEEccCCcEEEEEEEecCCCCh---------HHHHHHHHHHHHHhhCCCCCe--eeEeeeeeecC---CceEEEE
Q 015455 130 SNVYKAKDMLTGKIVALKKVRFDNLEP---------ESVKFMAREILILRRLDHPNV--IKLEGLVTSRM---SCSLYLV 195 (406)
Q Consensus 130 g~Vy~~~~~~~~~~vaiK~~~~~~~~~---------~~~~~~~~E~~~l~~l~h~~i--v~l~~~~~~~~---~~~~~lv 195 (406)
..|+++. ..|+.|.||......... .......+|...+..+...+| ..++++..... ...-++|
T Consensus 36 rrvvr~~--~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LV 113 (268)
T PRK15123 36 RRTLRFE--LAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFII 113 (268)
T ss_pred ceEEEEE--ECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEE
Confidence 3455653 467789999764322110 001135678888877743222 33344443321 2246899
Q ss_pred Eeccccc--HHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcC-------CCcEEEeeecccc
Q 015455 196 FHYMEHD--LAGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD-------DGVLKIADFGLAS 265 (406)
Q Consensus 196 ~e~~~~~--l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~-------~~~~kl~DFgla~ 265 (406)
||++++. +.+++.. .....+......++.+++..+.-||..||+|+|+++.|||++. +..+.|+||+.+.
T Consensus 114 te~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 114 TEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred EeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 9999984 5444432 1235567788899999999999999999999999999999975 4689999999885
Q ss_pred c
Q 015455 266 F 266 (406)
Q Consensus 266 ~ 266 (406)
.
T Consensus 194 ~ 194 (268)
T PRK15123 194 I 194 (268)
T ss_pred c
Confidence 4
No 452
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.93 E-value=1.1e-08 Score=91.79 Aligned_cols=137 Identities=26% Similarity=0.248 Sum_probs=98.0
Q ss_pred cceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC--------------------ChHHHHHHHHHHHHHhhCCCC--
Q 015455 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL--------------------EPESVKFMAREILILRRLDHP-- 175 (406)
Q Consensus 118 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--------------------~~~~~~~~~~E~~~l~~l~h~-- 175 (406)
..+.+.||-|.-+.||.|.+ ..|.++|||.=+.... -........+|.++|..|...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~-~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAID-PKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEEC-CCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 55678999999999999985 6899999996433210 012234556799999998654
Q ss_pred CeeeEeeeeeecCCceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCc
Q 015455 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGV 255 (406)
Q Consensus 176 ~iv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~ 255 (406)
.+.+.++. +...+|||+++|-.+.-.. ++......++..|+.-+.-+-..||||+|+.+-||+++++|.
T Consensus 172 ~VP~P~~~------nRHaVvMe~ieG~eL~~~r-----~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~ 240 (304)
T COG0478 172 KVPKPIAW------NRHAVVMEYIEGVELYRLR-----LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGD 240 (304)
T ss_pred CCCCcccc------ccceeeeehcccceeeccc-----CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCC
Confidence 56665442 3368999999995443222 123344455555566555555899999999999999999999
Q ss_pred EEEeeeccccc
Q 015455 256 LKIADFGLASF 266 (406)
Q Consensus 256 ~kl~DFgla~~ 266 (406)
+.++||--+..
T Consensus 241 ~~vIDwPQ~v~ 251 (304)
T COG0478 241 IVVIDWPQAVP 251 (304)
T ss_pred EEEEeCccccc
Confidence 99999976543
No 453
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.90 E-value=2.2e-08 Score=89.09 Aligned_cols=106 Identities=24% Similarity=0.294 Sum_probs=78.3
Q ss_pred HHHHHHHHHhhCCCC--CeeeEeeeeeecCC--ceEEEEEecccc--cHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 015455 161 FMAREILILRRLDHP--NVIKLEGLVTSRMS--CSLYLVFHYMEH--DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234 (406)
Q Consensus 161 ~~~~E~~~l~~l~h~--~iv~l~~~~~~~~~--~~~~lv~e~~~~--~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH 234 (406)
...+|...+..|... .+.+.+++...... ...++++|++++ ++...+.... ..+......++.+++..++-||
T Consensus 57 ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~-~~~~~~~~~ll~~l~~~i~~lH 135 (206)
T PF06293_consen 57 RAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE-QLDPSQRRELLRALARLIAKLH 135 (206)
T ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc-ccchhhHHHHHHHHHHHHHHHH
Confidence 456688777777432 23444555444322 235899999987 3444444322 3677788899999999999999
Q ss_pred HCCCeeccCCCCCeEEcCCC---cEEEeeecccccc
Q 015455 235 NNGVLHRDIKGSNLLIDDDG---VLKIADFGLASFF 267 (406)
Q Consensus 235 ~~~ivHrDlkp~NIll~~~~---~~kl~DFgla~~~ 267 (406)
..||+|+|++|.|||++.++ .+.++||+-+...
T Consensus 136 ~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 136 DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99999999999999999887 8999999987653
No 454
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.77 E-value=1.2e-07 Score=84.34 Aligned_cols=139 Identities=22% Similarity=0.262 Sum_probs=96.4
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCC--------------------hH--HHHHHHHHHHHHhhCC--CCCe
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--------------------PE--SVKFMAREILILRRLD--HPNV 177 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--------------------~~--~~~~~~~E~~~l~~l~--h~~i 177 (406)
..|..|--++||+|.. .++..+|+|+++..... .. ......+|+.-|.++. +-.+
T Consensus 54 g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrv 132 (268)
T COG1718 54 GCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRV 132 (268)
T ss_pred eeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3677788889999973 77899999998653211 11 1122335777777773 3333
Q ss_pred eeEeeeeeecCCceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCCeEEcCCCcE
Q 015455 178 IKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN-NGVLHRDIKGSNLLIDDDGVL 256 (406)
Q Consensus 178 v~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~ 256 (406)
.+.+++.. -.++|||++..-.-.-.-.+..+...++..+..+++..+.-|-. .++||+||+.-|||+. ++.+
T Consensus 133 P~Pi~~~~------nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p 205 (268)
T COG1718 133 PEPIAFRN------NVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEP 205 (268)
T ss_pred CCceeecC------CeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCeE
Confidence 34443322 37999999875211112223344445788888899999998887 8999999999999998 8999
Q ss_pred EEeeeccccccC
Q 015455 257 KIADFGLASFFD 268 (406)
Q Consensus 257 kl~DFgla~~~~ 268 (406)
.|+|||-|....
T Consensus 206 ~iID~~QaV~~~ 217 (268)
T COG1718 206 YIIDVSQAVTID 217 (268)
T ss_pred EEEECccccccC
Confidence 999999887654
No 455
>PRK09902 hypothetical protein; Provisional
Probab=98.71 E-value=4.3e-07 Score=79.68 Aligned_cols=139 Identities=14% Similarity=0.171 Sum_probs=97.9
Q ss_pred ccCCceEEEEEEEccCCcEEEEEEEecC---CCC-hHHHHHHHHHHHHHhhCCC--CCeeeEeeeee---ecCCceEEEE
Q 015455 125 GQGTYSNVYKAKDMLTGKIVALKKVRFD---NLE-PESVKFMAREILILRRLDH--PNVIKLEGLVT---SRMSCSLYLV 195 (406)
Q Consensus 125 g~G~~g~Vy~~~~~~~~~~vaiK~~~~~---~~~-~~~~~~~~~E~~~l~~l~h--~~iv~l~~~~~---~~~~~~~~lv 195 (406)
|+||-+-|+... ..|+.|-+|.-... ... +.....+.+|...|.+|.. -.+.++. ++. ......-+||
T Consensus 27 ~rgG~SgV~r~~--~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 27 RRNGMSGVQCVE--RNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred CCCCcceEEEEE--eCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 568888898875 44557888875311 001 2234568889999998843 2244443 222 1222346799
Q ss_pred Eecccc--cHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCc--EEEeeeccccc
Q 015455 196 FHYMEH--DLAGLAASP-EVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGV--LKIADFGLASF 266 (406)
Q Consensus 196 ~e~~~~--~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~--~kl~DFgla~~ 266 (406)
+|-+++ ++.+.+... -.+.+......++.+++.++.-||+.|+.|+|+-+.|||++.++. ++++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 998884 565555432 235677888899999999999999999999999999999986777 99999986653
No 456
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.67 E-value=4.2e-09 Score=103.96 Aligned_cols=243 Identities=16% Similarity=0.077 Sum_probs=161.8
Q ss_pred CcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCC-eeeEeeeeeecCCceEEEE
Q 015455 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN-VIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 117 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~-iv~l~~~~~~~~~~~~~lv 195 (406)
-+...+.+++|+++++++.+...+...+ .+.+... ....-++++|.+++||| .+..++- .+.+.+.+++
T Consensus 243 ws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~-------l~~rl~~eLLdK~n~P~~~v~~~~d--~~~E~~~~i~ 312 (829)
T KOG0576|consen 243 WSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT-------LSRRLAIELLDKVNNPNPVVRYLED--YDGEDYLWIP 312 (829)
T ss_pred chHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc-------hhhHHHHHHHHHccCCCCccccccc--CCcccccchh
Confidence 3667788999999999999865544433 5555432 12333789999999999 4433332 3335678999
Q ss_pred Eeccccc--HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeeccccccCCCCCC
Q 015455 196 FHYMEHD--LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273 (406)
Q Consensus 196 ~e~~~~~--l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~ 273 (406)
++++.++ ...........+..-+...+.+.-+++|++||+.-=+|+| ||+..+ +..+..||+....+....
T Consensus 313 ~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~-- 385 (829)
T KOG0576|consen 313 MRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM-- 385 (829)
T ss_pred hhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccCccc--
Confidence 9999876 2222222222344555566677778899999998778998 777754 789999999988776543
Q ss_pred CCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCccc
Q 015455 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353 (406)
Q Consensus 274 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
......+++.++|||+..... +....|+|++|+-..+|.-|-+|-... +........-++...
T Consensus 386 ~~~t~~~~~~~~~pev~~~~~-~~~~p~~~~~~~~~~~~ap~~pPr~~P----------------~~~~~~~g~~p~s~~ 448 (829)
T KOG0576|consen 386 KPRTAIGTPEPLAPEVIQENT-IDGCPDSGSLAVSAIQMAPGLPPRSSP----------------PAVLPMIGNGPNSPM 448 (829)
T ss_pred ccccCCCCCCCCCchhhcccc-cccCCCccCCCcchhhcCCCCCCCCCC----------------ccccCCCCCCCCccc
Confidence 245668899999999887655 888999999999878888888776541 110000000000000
Q ss_pred CCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCcccc
Q 015455 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVSY 403 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~~f~ 403 (406)
.... . ..-+..-.++...|+..-|..|+++..++-|.+|+
T Consensus 449 L~~~--------~--aw~~~~~~~~~~~~~~g~P~~pkv~mgacfsKvfn 488 (829)
T KOG0576|consen 449 LTDK--------S--AWSPVFHRDFPAPCLNGLPPTPKVHMGACFSKVFN 488 (829)
T ss_pred cchh--------h--hcCcccccCCcccccCCCCCCCcchhhHHHHHHhc
Confidence 0000 0 00111112578889999999999999999988886
No 457
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.64 E-value=6.7e-07 Score=78.81 Aligned_cols=139 Identities=18% Similarity=0.218 Sum_probs=86.5
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCC-hHHHHH------HHHHHHHHhhC---CCCCeeeEeeeee
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-PESVKF------MAREILILRRL---DHPNVIKLEGLVT 185 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~------~~~E~~~l~~l---~h~~iv~l~~~~~ 185 (406)
.+|+..+.+-......|.+.. .+|+.+++|..+..... +..... ..+++..+..+ .......++.+..
T Consensus 31 ~~~~~~kv~k~~~r~~ValIe--i~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~e 108 (229)
T PF06176_consen 31 NNYKIIKVFKNTKRNYVALIE--IDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAE 108 (229)
T ss_pred CCceEEEeecCCCccEEEEEE--ECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeee
Confidence 578888988888777777664 67889999987643311 111110 12233333333 2333333322222
Q ss_pred e---cCCceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCCCcEEEeeec
Q 015455 186 S---RMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFG 262 (406)
Q Consensus 186 ~---~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFg 262 (406)
- ......+++|||++|--+.... .+++ .+...+..++.-||+.|++|+|..|.|++++.+ .++++||+
T Consensus 109 kk~~~~~~~~~ll~EYIeG~~l~d~~----~i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~-~i~iID~~ 179 (229)
T PF06176_consen 109 KKIFRYTSSYVLLMEYIEGVELNDIE----DIDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNN-GIRIIDTQ 179 (229)
T ss_pred eeeccceeEEEEEEEEecCeecccch----hcCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECC-cEEEEECc
Confidence 1 1123457899999994433221 1222 244567788999999999999999999999855 49999998
Q ss_pred ccc
Q 015455 263 LAS 265 (406)
Q Consensus 263 la~ 265 (406)
..+
T Consensus 180 ~k~ 182 (229)
T PF06176_consen 180 GKR 182 (229)
T ss_pred ccc
Confidence 654
No 458
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.55 E-value=4e-07 Score=95.88 Aligned_cols=204 Identities=21% Similarity=0.168 Sum_probs=140.0
Q ss_pred HHHHHHHHHHhhCCCCCeeeEeeeeeecCCce--EEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 015455 160 KFMAREILILRRLDHPNVIKLEGLVTSRMSCS--LYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG 237 (406)
Q Consensus 160 ~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~--~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ 237 (406)
.....|.+.+....|+|++.+..|-..+.... +.+..+++.........+.-...+...++.+..++.+||.|+|+..
T Consensus 227 ~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~ 306 (1351)
T KOG1035|consen 227 QTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLS 306 (1351)
T ss_pred HHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhc
Confidence 33445777888889999999977765433322 2334466766555556666678899999999999999999999997
Q ss_pred CeeccCCCC---CeEEcCCCcEEEe--eeccccccCCCCCCCCcCccccCcccccccccCCc-cCCCccchHHHHHHHHH
Q 015455 238 VLHRDIKGS---NLLIDDDGVLKIA--DFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT-DYGVGVDLWSAGCILAE 311 (406)
Q Consensus 238 ivHrDlkp~---NIll~~~~~~kl~--DFgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~DvwslGv~l~e 311 (406)
..|.-+..+ +-..+.++.+.++ ||+.++.+..... ......+..+.+||...... ......|+|++|.++..
T Consensus 307 l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~--~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~ 384 (1351)
T KOG1035|consen 307 LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK--SFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQ 384 (1351)
T ss_pred cceeEEecccccccccCccceeecchhhhcccccCCCccc--chhhcCccccccccccccccchhhhhhHHHHHHHHHhh
Confidence 666665555 4445566777777 9998877653332 22334466678888765422 12334799999999999
Q ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcC-CCCCChHHHHHHcccCCCCCC
Q 015455 312 LLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFK-DFPPSSLPLIETLLAIDPAER 390 (406)
Q Consensus 312 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~R 390 (406)
+..|..+-... ..+... .+ .......++..+|+.-|+++|
T Consensus 385 ~~~~~~i~~~~------~~~~~~---------------------------------l~~~~~~~~~d~~~~~~~~~~~~R 425 (1351)
T KOG1035|consen 385 LSQGEDISEKS------AVPVSL---------------------------------LDVLSTSELLDALPKCLDEDSEER 425 (1351)
T ss_pred hhhcCcccccc------cchhhh---------------------------------hccccchhhhhhhhhhcchhhhhc
Confidence 99886432211 001000 01 122267889999999999999
Q ss_pred cCHHHHhcCccccc
Q 015455 391 LTATVALNSEVSYQ 404 (406)
Q Consensus 391 pta~elL~h~~f~~ 404 (406)
+++.++|.|+|.+.
T Consensus 426 l~~~~ll~~~f~~~ 439 (1351)
T KOG1035|consen 426 LSALELLTHPFLRF 439 (1351)
T ss_pred cchhhhhhchhccc
Confidence 99999999999863
No 459
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.42 E-value=1.2e-06 Score=87.53 Aligned_cols=143 Identities=22% Similarity=0.312 Sum_probs=85.8
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCC---------------------------h-----HHHH------HHH
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE---------------------------P-----ESVK------FMA 163 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---------------------------~-----~~~~------~~~ 163 (406)
+-|+.++-|.||+|+. .+|+.||||+.+.+-.. . +..+ .+.
T Consensus 131 ~PiAsASIaQVH~A~L-~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVL-KSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEe-cCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 5689999999999985 67999999998763210 0 0001 122
Q ss_pred HHHHHHhhCC-----CCCeeeEeeeeeecCCceEEEEEeccccc-HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 015455 164 REILILRRLD-----HPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG 237 (406)
Q Consensus 164 ~E~~~l~~l~-----h~~iv~l~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ 237 (406)
+|...+.+++ .+++. +=.++.+- .+.-.++|||++|- +.+....+...++...+...+.++. +..+=..|
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~-VP~V~we~-t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f--~~q~~~dg 285 (517)
T COG0661 210 REAANAERFRENFKDDPDVY-VPKVYWEY-TTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAF--LRQLLRDG 285 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeE-eceeehhc-cCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcC
Confidence 3444444431 23322 22222221 23368999999983 2222211112344333332222221 22233479
Q ss_pred CeeccCCCCCeEEcCCCcEEEeeeccccccCC
Q 015455 238 VLHRDIKGSNLLIDDDGVLKIADFGLASFFDP 269 (406)
Q Consensus 238 ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~ 269 (406)
++|.|..|.||+++.+|++.+.|||+...+++
T Consensus 286 ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 286 FFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred ccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 99999999999999999999999999977654
No 460
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.33 E-value=8.1e-06 Score=73.52 Aligned_cols=139 Identities=24% Similarity=0.316 Sum_probs=78.3
Q ss_pred eeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCC--CeeeEeeeeee-cCCceEEEEEe
Q 015455 121 IDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP--NVIKLEGLVTS-RMSCSLYLVFH 197 (406)
Q Consensus 121 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~--~iv~l~~~~~~-~~~~~~~lv~e 197 (406)
++.|+.|..+.||++.. .+ ..+++|..... .....+.+|..+++.+... .+.+++.+... ......+++|+
T Consensus 2 i~~l~~G~~n~~~~v~~-~~-~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~ 75 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTT-DD-GRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLME 75 (239)
T ss_dssp EEEEEESSSSEEEEEEE-TT-SEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEE
T ss_pred CccCCCCCeeeEEEEEE-CC-cEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEE
Confidence 46799999999999975 33 58999986532 3456677888888888433 34555553322 22344799999
Q ss_pred cccccHHHH---------------------hcC--CCCCCCHHH------HHHH---------------HHHHHH-HHHH
Q 015455 198 YMEHDLAGL---------------------AAS--PEVKFTEPQ------VKCY---------------MHQLLS-GLEH 232 (406)
Q Consensus 198 ~~~~~l~~~---------------------~~~--~~~~~~~~~------~~~~---------------~~qi~~-aL~~ 232 (406)
+++|..... ... ....+.... .... ...+.. .+..
T Consensus 76 ~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (239)
T PF01636_consen 76 YIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQE 155 (239)
T ss_dssp EESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred EeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHH
Confidence 998742222 001 111111100 0000 111222 3333
Q ss_pred HHH-------CCCeeccCCCCCeEEc-CCCcEEEeeecccc
Q 015455 233 CHN-------NGVLHRDIKGSNLLID-DDGVLKIADFGLAS 265 (406)
Q Consensus 233 LH~-------~~ivHrDlkp~NIll~-~~~~~kl~DFgla~ 265 (406)
+++ ..++|+|+.|.|||++ .++.+-|+||+.+.
T Consensus 156 ~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 156 LEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred HHhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 332 3599999999999999 66777899998764
No 461
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.27 E-value=9.8e-06 Score=73.06 Aligned_cols=134 Identities=16% Similarity=0.102 Sum_probs=77.7
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCC--eeeEeeeeeecCCceEEEEEecc
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN--VIKLEGLVTSRMSCSLYLVFHYM 199 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~--iv~l~~~~~~~~~~~~~lv~e~~ 199 (406)
..||+|..+.||+. .|..+++|...... . ...+.+|.+++..+..-. +.+.+++... .....++|+++
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~-~---~~~i~~E~~~l~~l~~~glpvP~~~~~~~~--~~~~glv~e~i 76 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF-D---KETIKREFDASRKVFSLGIPTPHPFDLVED--GGRLGLIYELI 76 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC-C---HHHHHHHHHHHHHHHHcCCCCCceEEEEec--CCeeeeeeeec
Confidence 56899999999984 24467888775422 1 234577999998885433 3445555444 33467899999
Q ss_pred cccH-HH-Hh--------------------cCC--CCCCCHHH-HHHHHHH----------HHH-HHHHHHH----CCCe
Q 015455 200 EHDL-AG-LA--------------------ASP--EVKFTEPQ-VKCYMHQ----------LLS-GLEHCHN----NGVL 239 (406)
Q Consensus 200 ~~~l-~~-~~--------------------~~~--~~~~~~~~-~~~~~~q----------i~~-aL~~LH~----~~iv 239 (406)
+|.. .. .. ... -...+... ...+..+ +.. ...+|.. ..++
T Consensus 77 ~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 156 (226)
T TIGR02172 77 VGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCL 156 (226)
T ss_pred CCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceE
Confidence 9841 10 00 000 00111111 0011000 111 1222221 1478
Q ss_pred eccCCCCCeEEcCCCcEEEeeeccccc
Q 015455 240 HRDIKGSNLLIDDDGVLKIADFGLASF 266 (406)
Q Consensus 240 HrDlkp~NIll~~~~~~kl~DFgla~~ 266 (406)
|+|+.|.||++++++ +.|+||+.+..
T Consensus 157 HgD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 157 HGDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred ecCCCCCcEEEcCCC-cEEEechhcCc
Confidence 999999999999888 99999998753
No 462
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.19 E-value=4e-05 Score=66.85 Aligned_cols=129 Identities=25% Similarity=0.344 Sum_probs=88.9
Q ss_pred CCcceeeeeccCCc-eEEEEEEEccCCcEEEEEEEec---CC-------CCh---------HHHHHHHHHHHHHhhC---
Q 015455 116 DSFEKIDKIGQGTY-SNVYKAKDMLTGKIVALKKVRF---DN-------LEP---------ESVKFMAREILILRRL--- 172 (406)
Q Consensus 116 ~~y~~~~~lg~G~~-g~Vy~~~~~~~~~~vaiK~~~~---~~-------~~~---------~~~~~~~~E~~~l~~l--- 172 (406)
.+++.++.||.|.- |.||+++ -+|+.||+|.+.. .. ... ....-|..|-.+..+|
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~--I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVE--IDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEE--ECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 68999999999999 9999996 5778999999432 10 000 1223455677766666
Q ss_pred CCCCe--eeEeeeeeec----------------CCceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 015455 173 DHPNV--IKLEGLVTSR----------------MSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234 (406)
Q Consensus 173 ~h~~i--v~l~~~~~~~----------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH 234 (406)
.+.++ |+++|+..-. ......||.||+.... .++. .-+.+|..-|..+|
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~----~~~~~~~~dl~~~~ 181 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQI----RDIPQMLRDLKILH 181 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccch----hHHHHHHHHHHHHH
Confidence 45566 8999987321 1122457777665433 2222 33457778888899
Q ss_pred HCCCeeccCCCCCeEEcCCCcEEEeeeccc
Q 015455 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLA 264 (406)
Q Consensus 235 ~~~ivHrDlkp~NIll~~~~~~kl~DFgla 264 (406)
..||+-+|+++.|.. .-+|+|||.+
T Consensus 182 k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 182 KLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HCCeeeccCcccccc-----CCEEEecccC
Confidence 999999999999975 3488999864
No 463
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.08 E-value=2.7e-05 Score=65.86 Aligned_cols=130 Identities=22% Similarity=0.268 Sum_probs=89.9
Q ss_pred cceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeee-EeeeeeecCCceEEEEE
Q 015455 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIK-LEGLVTSRMSCSLYLVF 196 (406)
Q Consensus 118 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~-l~~~~~~~~~~~~~lv~ 196 (406)
.+..+.||+|.+|.||+|. ..|..+|+|+-+.+. ....+..|+++|..+.--++-+ ++.| .. -++.|
T Consensus 24 ~~v~~~L~KG~~s~Vyl~~--~~~~~~a~Kvrr~ds----~r~~l~kEakiLeil~g~~~~p~vy~y--g~----~~i~m 91 (201)
T COG2112 24 LRVEKELAKGTTSVVYLGE--WRGGEVALKVRRRDS----PRRNLEKEAKILEILAGEGVTPEVYFY--GE----DFIRM 91 (201)
T ss_pred hhhhhhhhcccccEEEEee--ccCceEEEEEecCCc----chhhHHHHHHHHHHhhhcCCCceEEEe--ch----hhhhh
Confidence 4567889999999999996 567789999865443 3456778999999887655543 3322 21 34569
Q ss_pred eccccc-HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC-CCCeEEcCCCcEEEeeecccccc
Q 015455 197 HYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIK-GSNLLIDDDGVLKIADFGLASFF 267 (406)
Q Consensus 197 e~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlk-p~NIll~~~~~~kl~DFgla~~~ 267 (406)
||+.|- |....... + +.-+..++++---|-..||-|..|. |..++|..++.+.|+||..|+..
T Consensus 92 e~i~G~~L~~~~~~~----~----rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k 156 (201)
T COG2112 92 EYIDGRPLGKLEIGG----D----RKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATFK 156 (201)
T ss_pred hhhcCcchhhhhhcc----c----HHHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhhc
Confidence 999984 44332221 1 2334466666556777899999885 66666666779999999988743
No 464
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.07 E-value=5e-05 Score=69.30 Aligned_cols=70 Identities=17% Similarity=0.119 Sum_probs=44.6
Q ss_pred eccCCc-eEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCC-CCCeeeEeeeeeecCCceEEEEEecccc
Q 015455 124 IGQGTY-SNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD-HPNVIKLEGLVTSRMSCSLYLVFHYMEH 201 (406)
Q Consensus 124 lg~G~~-g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~l~~~~~~~~~~~~~lv~e~~~~ 201 (406)
|-.|.. ..||++.. .+..+.+|...... ...+.+|+.+++.+. +-.+.+++++.... ...++||++++|
T Consensus 6 ~~~g~~~~~v~~~~~--~~~~~~vk~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~--~~~~lv~e~i~G 76 (244)
T cd05150 6 VTEGQSGATVYRLDG--KNPGLYLKIAPSGP-----TYELEREAERLRWLAGKLPVPEVIDYGSDD--GRAWLLTSAVPG 76 (244)
T ss_pred cCCCCCcCeEEEEcC--CCCcEEEEecCCCc-----ccchHHHHHHHHHHHhcCCCCeEEEEEecC--CccEEEEEeeCC
Confidence 444555 68999963 34678888764322 234566888888773 33345566555442 347899999987
Q ss_pred c
Q 015455 202 D 202 (406)
Q Consensus 202 ~ 202 (406)
.
T Consensus 77 ~ 77 (244)
T cd05150 77 V 77 (244)
T ss_pred c
Confidence 4
No 465
>PLN02876 acyl-CoA dehydrogenase
Probab=98.06 E-value=7e-05 Score=80.39 Aligned_cols=81 Identities=25% Similarity=0.338 Sum_probs=54.7
Q ss_pred eeeeccCCceEEEEEEEccCC--cEEEEEEEecCCCChHHHHHHHHHHHHHhhCC-CCCe--eeEeeeeeecC-CceEEE
Q 015455 121 IDKIGQGTYSNVYKAKDMLTG--KIVALKKVRFDNLEPESVKFMAREILILRRLD-HPNV--IKLEGLVTSRM-SCSLYL 194 (406)
Q Consensus 121 ~~~lg~G~~g~Vy~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i--v~l~~~~~~~~-~~~~~l 194 (406)
++.|+.|.++.+|+......+ ..+++|+....... .....+.+|+.+|+.+. |.++ .+++.++.+.. .+..|+
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~-~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~fl 121 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLL-QSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFY 121 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccC-ccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceE
Confidence 577899999999998753322 46788876443221 12345778999999985 6654 66666665431 235789
Q ss_pred EEeccccc
Q 015455 195 VFHYMEHD 202 (406)
Q Consensus 195 v~e~~~~~ 202 (406)
||||++|.
T Consensus 122 VME~v~G~ 129 (822)
T PLN02876 122 IMEYLEGR 129 (822)
T ss_pred EEEecCCc
Confidence 99999874
No 466
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.96 E-value=4.5e-05 Score=76.22 Aligned_cols=142 Identities=17% Similarity=0.196 Sum_probs=83.8
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCC-----------------------------hHHHHHHH------HHH
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----------------------------PESVKFMA------REI 166 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-----------------------------~~~~~~~~------~E~ 166 (406)
+-||.-+.|.|++|+. .+|+.||||+-+.+-.. .+..+.+. +|.
T Consensus 167 ~piaaASlaQVhrA~L-~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARL-KNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEe-cCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 5699999999999995 56999999987653210 11112222 222
Q ss_pred HHHhh----CCCCC---eeeEeeeeeecCCceEEEEEecccc---cHHHHhcCCCCCCCHHHHHHHHHHHHHHHH-HHHH
Q 015455 167 LILRR----LDHPN---VIKLEGLVTSRMSCSLYLVFHYMEH---DLAGLAASPEVKFTEPQVKCYMHQLLSGLE-HCHN 235 (406)
Q Consensus 167 ~~l~~----l~h~~---iv~l~~~~~~~~~~~~~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~-~LH~ 235 (406)
+-..+ +.|-+ -|.+=.++.+- ...-.|+||||+| +.++.+... .++...+..- +.++.. -+=.
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~-st~RVLtME~~~G~~i~Dl~~i~~~--gi~~~~i~~~---l~~~~~~qIf~ 319 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDL-STKRVLTMEYVDGIKINDLDAIDKR--GISPHDILNK---LVEAYLEQIFK 319 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhc-CcceEEEEEecCCccCCCHHHHHHc--CCCHHHHHHH---HHHHHHHHHHh
Confidence 22222 23444 11122222221 2246899999998 333334333 3444433332 222222 1234
Q ss_pred CCCeeccCCCCCeEEcC----CCcEEEeeeccccccCCC
Q 015455 236 NGVLHRDIKGSNLLIDD----DGVLKIADFGLASFFDPN 270 (406)
Q Consensus 236 ~~ivHrDlkp~NIll~~----~~~~kl~DFgla~~~~~~ 270 (406)
.|++|+|=.|.||+++. ++.+.+.|||+...+...
T Consensus 320 ~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~ 358 (538)
T KOG1235|consen 320 TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHK 358 (538)
T ss_pred cCCccCCCCCCcEEEecCCCCCccEEEEcccccccccHH
Confidence 68999999999999983 678999999999876543
No 467
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.93 E-value=1.4e-06 Score=93.92 Aligned_cols=205 Identities=13% Similarity=-0.007 Sum_probs=133.7
Q ss_pred ccCCcceeeeeccCCceEEEEEEEccCC-cEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceE
Q 015455 114 RADSFEKIDKIGQGTYSNVYKAKDMLTG-KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 114 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~-~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~ 192 (406)
.+..+++.--+|-|.++.--.-+.+.++ +.-+-|....+.+.+...+....|++-++...|++++....-.........
T Consensus 1227 ~~e~~EV~l~i~~~~~~R~k~Lr~kid~Fk~~I~ke~d~e~LsePlkemll~e~de~~~~~h~~~~~~p~rI~ps~s~ee 1306 (2724)
T KOG1826|consen 1227 AMEHSEVNLGISNHFHFRNKWLRSKIDWFKFSIYKEYDFENLSEPLKEMLLSERDELREAKHYLTEVDPLRIPPSESTEE 1306 (2724)
T ss_pred HhhhhheeeecccceeeccchHhhhhceeEEEeehhhhHHHHhhHHHHhhhhhhhhhhhhhceeeecccccCCCCCChHH
Confidence 3566666666666655432222212222 111222233334444455566677777778899999877665555555567
Q ss_pred EEEEecccccHHHH-hcCC---CCCCCHHHHHHHHHHHHHHHHHHHHC-----CCeeccCCCCCeEEcCCCcEEEeeecc
Q 015455 193 YLVFHYMEHDLAGL-AASP---EVKFTEPQVKCYMHQLLSGLEHCHNN-----GVLHRDIKGSNLLIDDDGVLKIADFGL 263 (406)
Q Consensus 193 ~lv~e~~~~~l~~~-~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~-----~ivHrDlkp~NIll~~~~~~kl~DFgl 263 (406)
|..++|+.++.... +.+. ...+...-+.....+.+.+..-.|+. -.+|+++|+.|.+|..+..++++++|+
T Consensus 1307 ~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gL 1386 (2724)
T KOG1826|consen 1307 YIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGL 1386 (2724)
T ss_pred HHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCccccccccc
Confidence 89999998765553 3322 12233333333334446666666654 278999999999999999999999999
Q ss_pred ccccCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCC
Q 015455 264 ASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMP 320 (406)
Q Consensus 264 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~ 320 (406)
.+...+. .......++++.|++|++...- .++.++|+|..|+.+|+...|.++|-
T Consensus 1387 dKIknp~-~sf~Gl~l~sp~~v~qli~N~i-k~t~rsdilr~s~~ly~rs~~n~~fi 1441 (2724)
T KOG1826|consen 1387 DKIKNPV-LSFFGLELCSPIYVLQLIKNEI-KFTKRSDILRRSLSLYLRSDGNAYFI 1441 (2724)
T ss_pred ccccCch-HhhhhhhhCCHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhcccHHHH
Confidence 9844322 2224456778899999977553 37878999999999999999987763
No 468
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.92 E-value=6.5e-05 Score=68.21 Aligned_cols=30 Identities=30% Similarity=0.493 Sum_probs=25.4
Q ss_pred CCeeccCCCCCeEEcCCCcEEEeeeccccc
Q 015455 237 GVLHRDIKGSNLLIDDDGVLKIADFGLASF 266 (406)
Q Consensus 237 ~ivHrDlkp~NIll~~~~~~kl~DFgla~~ 266 (406)
+++|+|+.|.|||++.++..-|+||+.+..
T Consensus 165 ~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~ 194 (235)
T cd05155 165 VWFHGDLAPGNLLVQDGRLSAVIDFGCLGV 194 (235)
T ss_pred eEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence 489999999999998766567999997753
No 469
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.88 E-value=0.00038 Score=61.15 Aligned_cols=129 Identities=19% Similarity=0.262 Sum_probs=85.4
Q ss_pred eeeeccCCceEEEEEEEccCCcEEEEEEEecCC--------------CChHHHHHHHHHHHHHhhCC------CCCeeeE
Q 015455 121 IDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDN--------------LEPESVKFMAREILILRRLD------HPNVIKL 180 (406)
Q Consensus 121 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~~E~~~l~~l~------h~~iv~l 180 (406)
...||+|+.=.||.- .......||++.... ..........+|+.-...+. +.+|.++
T Consensus 6 ~~~i~~G~~R~cy~H---P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 6 SDLIAQGGERDCYQH---PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CcccccCCCceEEEC---CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 457999999999975 344456789887655 01112344555665555554 8899999
Q ss_pred eeeeeecCCceEEEEEecccc-------cHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCC
Q 015455 181 EGLVTSRMSCSLYLVFHYMEH-------DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDD 253 (406)
Q Consensus 181 ~~~~~~~~~~~~~lv~e~~~~-------~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~ 253 (406)
+|+.+...+ .-+|+|.+.. ++.+++.. ..+++ . +...+-.-..||-+.+|+.+|++|.||++...
T Consensus 83 ~G~veT~~G--~Glv~e~I~d~dG~~s~TL~~~l~~--~~~~~-~---~~~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~ 154 (199)
T PF10707_consen 83 YGFVETNLG--LGLVVELIRDADGNISPTLEDYLKE--GGLTE-E---LRQALDEFKRYLLDHHIVIRDLNPHNIVVQRR 154 (199)
T ss_pred eEEEecCCc--eEEEEEEEECCCCCcCccHHHHHHc--CCccH-H---HHHHHHHHHHHHHHcCCeecCCCcccEEEEec
Confidence 999988544 7788887632 34444422 24555 3 33344455568889999999999999999633
Q ss_pred C----cEEEee
Q 015455 254 G----VLKIAD 260 (406)
Q Consensus 254 ~----~~kl~D 260 (406)
. .+.|+|
T Consensus 155 ~~~~~~lvlID 165 (199)
T PF10707_consen 155 DSGEFRLVLID 165 (199)
T ss_pred CCCceEEEEEe
Confidence 2 577777
No 470
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.87 E-value=5.6e-05 Score=66.00 Aligned_cols=98 Identities=27% Similarity=0.240 Sum_probs=76.9
Q ss_pred HHHHHHhhCCC-CCeeeEeeeeeecCCceEEEEEeccccc-HHHHh--cCCCCCCCHHHHHHHHHHHHHHHHHHHH---C
Q 015455 164 REILILRRLDH-PNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLA--ASPEVKFTEPQVKCYMHQLLSGLEHCHN---N 236 (406)
Q Consensus 164 ~E~~~l~~l~h-~~iv~l~~~~~~~~~~~~~lv~e~~~~~-l~~~~--~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~ 236 (406)
.|.-+|+.+++ +++.+++|+|-. +++.||.+.+ +.... ...-...+|..+..++.+++..+.+|++ .
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG~------~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~ 81 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCGR------FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLG 81 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECCC------EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 47788888865 699999998743 6788988853 32210 1111246899999999999999999998 3
Q ss_pred CCeeccCCCCCeEEcCCCcEEEeeecccccc
Q 015455 237 GVLHRDIKGSNLLIDDDGVLKIADFGLASFF 267 (406)
Q Consensus 237 ~ivHrDlkp~NIll~~~~~~kl~DFgla~~~ 267 (406)
.+.-.|++|+|+-+++++++|++|...+...
T Consensus 82 ~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 82 FFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred cEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 5777999999999999999999999987654
No 471
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.77 E-value=0.00029 Score=66.41 Aligned_cols=142 Identities=21% Similarity=0.268 Sum_probs=98.1
Q ss_pred eeeeccCCceEEEEEEEccCCcEEEEEEEecCC--------------------C--ChHHHH--HHHHHHHHHhhCCCCC
Q 015455 121 IDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDN--------------------L--EPESVK--FMAREILILRRLDHPN 176 (406)
Q Consensus 121 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--------------------~--~~~~~~--~~~~E~~~l~~l~h~~ 176 (406)
-.+|..|--+.||.|. ..+|..+|||+++.+- . .+..+- ....|+.-|.+++...
T Consensus 149 nGCiSTGKEANVYHat-~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aG 227 (520)
T KOG2270|consen 149 NGCISTGKEANVYHAT-EEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAG 227 (520)
T ss_pred ccccccCccceeEeee-cCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 3567778889999998 5889999999875321 0 111111 2234677777775444
Q ss_pred eeeEeeeeeecCCceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCCeEEcCCCc
Q 015455 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN-NGVLHRDIKGSNLLIDDDGV 255 (406)
Q Consensus 177 iv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~ 255 (406)
|.-.--+.. ...+|||++++.+-.-.-.-++..++...+..+-.|++.-|.-|-+ +++||.||.--|+|+ .+|.
T Consensus 228 IP~PePIlL----k~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Ly-hdG~ 302 (520)
T KOG2270|consen 228 IPCPEPILL----KNHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLY-HDGK 302 (520)
T ss_pred CCCCCceee----ecceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheE-ECCE
Confidence 321111111 1257999999865444444455678888899999999998887765 599999999999999 6789
Q ss_pred EEEeeeccccccC
Q 015455 256 LKIADFGLASFFD 268 (406)
Q Consensus 256 ~kl~DFgla~~~~ 268 (406)
+.|+|.+-+...+
T Consensus 303 lyiIDVSQSVE~D 315 (520)
T KOG2270|consen 303 LYIIDVSQSVEHD 315 (520)
T ss_pred EEEEEccccccCC
Confidence 9999998776543
No 472
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.65 E-value=6e-05 Score=69.79 Aligned_cols=139 Identities=19% Similarity=0.179 Sum_probs=93.0
Q ss_pred CCcceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCCh--------------------HHHHHHHHHHHHHhhCC-C
Q 015455 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEP--------------------ESVKFMAREILILRRLD-H 174 (406)
Q Consensus 116 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--------------------~~~~~~~~E~~~l~~l~-h 174 (406)
.-+.+.+.||-|.-+.||.+-+ ..|++.++|.=++....- -..-...+|...|+.|. |
T Consensus 92 ~v~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~ 170 (465)
T KOG2268|consen 92 SVESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYER 170 (465)
T ss_pred hhhhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHc
Confidence 3478899999999999999975 779999999644322100 01112335777777773 2
Q ss_pred -CCeeeEeeeeeecCCceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCCeEEcCC
Q 015455 175 -PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDD 253 (406)
Q Consensus 175 -~~iv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~ 253 (406)
-.+.+.+++ +..++|||++.+..+.....- .+. ..+...+..-+.-|-.+|+||+|..--||+++++
T Consensus 171 gfpVPkpiD~------~RH~Vvmelv~g~Pl~~v~~v---~d~---~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd 238 (465)
T KOG2268|consen 171 GFPVPKPIDH------NRHCVVMELVDGYPLRQVRHV---EDP---PTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDD 238 (465)
T ss_pred CCCCCCcccc------cceeeHHHhhcccceeeeeec---CCh---HHHHHHHHHHHHHHHHcCceecccchheeEEecC
Confidence 223333332 346899999988544432221 122 2334455555666789999999999999999999
Q ss_pred CcEEEeeecccccc
Q 015455 254 GVLKIADFGLASFF 267 (406)
Q Consensus 254 ~~~kl~DFgla~~~ 267 (406)
+.++++||--+...
T Consensus 239 ~~i~vIDFPQmvS~ 252 (465)
T KOG2268|consen 239 DKIVVIDFPQMVST 252 (465)
T ss_pred CCEEEeechHhhcc
Confidence 99999999766543
No 473
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.62 E-value=0.00059 Score=61.76 Aligned_cols=73 Identities=14% Similarity=0.160 Sum_probs=43.9
Q ss_pred eeeeccCCceEEEEEEEcc-CCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCe-eeEeeeeeecCCceEEEEEec
Q 015455 121 IDKIGQGTYSNVYKAKDML-TGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV-IKLEGLVTSRMSCSLYLVFHY 198 (406)
Q Consensus 121 ~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~l~~~~~~~~~~~~~lv~e~ 198 (406)
++.|..|-...+|++.... ++..|++|+...... ......+|+.++..+....+ .++++.+. . .++|||
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~---~~~d~~~E~~~~~~l~~~gl~P~v~~~~~---~---~~l~e~ 73 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE---LIIDRERELRIHKLLSKHGLAPKLYATFQ---N---GLIYEF 73 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc---ceecHHHHHHHHHHHHhCCCCCeEEEEeC---C---cEEEEe
Confidence 4567778888999996422 357899997653221 11123468888888854333 34433221 1 379999
Q ss_pred cccc
Q 015455 199 MEHD 202 (406)
Q Consensus 199 ~~~~ 202 (406)
++|.
T Consensus 74 i~G~ 77 (235)
T cd05157 74 IPGR 77 (235)
T ss_pred eCCC
Confidence 8873
No 474
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.44 E-value=0.0006 Score=62.70 Aligned_cols=132 Identities=19% Similarity=0.225 Sum_probs=73.0
Q ss_pred eccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCe-eeEeeeeeecCCceEEEEEeccccc
Q 015455 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV-IKLEGLVTSRMSCSLYLVFHYMEHD 202 (406)
Q Consensus 124 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~l~~~~~~~~~~~~~lv~e~~~~~ 202 (406)
+..|-.+.+|+.. .++..+++|........- . -...+|..+++.+....+ .+++.. .. -++||||++|.
T Consensus 4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~-~-~~r~~E~~~l~~l~~~g~~P~~i~~--~~----~~~v~e~i~G~ 73 (256)
T TIGR02721 4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKAL-G-VDRQREYQILQALSALGLAPKPILV--NE----HWLLVEWLEGE 73 (256)
T ss_pred CCCcCcCCeEEEE--eCCccEEEeeCCcccccc-c-CcHHHHHHHHHHHHhcCCCCceEEE--eC----CEEEEEeccCc
Confidence 4457777899886 556788888754321110 0 124568888888854333 233322 21 25899999874
Q ss_pred HHH-------------------HhcC--CCCCCCH-HHHHHHHHHH---------HHHHHHHHH--------CCCeeccC
Q 015455 203 LAG-------------------LAAS--PEVKFTE-PQVKCYMHQL---------LSGLEHCHN--------NGVLHRDI 243 (406)
Q Consensus 203 l~~-------------------~~~~--~~~~~~~-~~~~~~~~qi---------~~aL~~LH~--------~~ivHrDl 243 (406)
... ++.. ....++. ..+..+..++ ...+..+-. ..++|+|+
T Consensus 74 ~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl 153 (256)
T TIGR02721 74 VITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDV 153 (256)
T ss_pred ccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCC
Confidence 321 0001 1111221 1122222122 111222222 14899999
Q ss_pred CCCCeEEcCCCcEEEeeeccccc
Q 015455 244 KGSNLLIDDDGVLKIADFGLASF 266 (406)
Q Consensus 244 kp~NIll~~~~~~kl~DFgla~~ 266 (406)
.|.||++++++ +.|+||..|..
T Consensus 154 ~~~Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 154 HAYNLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred CcCcEEEeCCC-CEEEeccccCc
Confidence 99999999877 78999998764
No 475
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.44 E-value=0.00047 Score=67.62 Aligned_cols=172 Identities=23% Similarity=0.293 Sum_probs=112.6
Q ss_pred HHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 015455 161 FMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLH 240 (406)
Q Consensus 161 ~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH 240 (406)
.+.--..+++.+.|+|+...+++-... .....+|||+++.++.+....+... .. ++. -+|+.|
T Consensus 28 ~ilgr~~~lktl~~~~l~~yl~~~r~~-~~r~IVV~e~~~~Sled~~~~~~l~--~~-------s~~-------~~~~~~ 90 (725)
T KOG1093|consen 28 QILGRFQYLKSLQHDNLCQYLDFSRGK-HERVIVVMEHYTMSLEDILKTGNLK--DE-------SLL-------AHGVLH 90 (725)
T ss_pred HHhhhhHHHHhhcCccceeeEeeecCc-cceEEEEehhhccchHHHHHhcccc--hh-------hhc-------ccccce
Confidence 345567899999999999988766543 3458999999999988866554311 00 000 112211
Q ss_pred ccCCCCCeEEcCCCcEEEeeeccccccCCCCCCCCcCccccCcccccccccCCccCCCccchHHHHHHHHHHHhCCCCCC
Q 015455 241 RDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMP 320 (406)
Q Consensus 241 rDlkp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell~g~~pf~ 320 (406)
-|| ++.+| -++ +. | |- ..++++||||+|.++.++.-|...+.
T Consensus 91 -----~~~-------~~~td-~~~-----------t~------~--~~------~~~pKsdVwsl~~i~~el~L~~~l~~ 132 (725)
T KOG1093|consen 91 -----LNI-------IYITD-HFL-----------TK------Y--PS------PIGPKSDVWSLGFIILELYLGISLEA 132 (725)
T ss_pred -----ehh-------hhccc-ccc-----------cc------C--CC------CCCcchhhhhHHHHHHHHHHhhHHHH
Confidence 122 22333 000 00 0 11 12359999999999999999999999
Q ss_pred CCChHHHHHHHHHHhCCCCHHHhhhcCCCCcccCCCCCchhhhhhhhcCCCCCChHHHHHHcccCCCCCCcCHHHHhcCc
Q 015455 321 GRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSE 400 (406)
Q Consensus 321 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~elL~h~ 400 (406)
.....+....+.+....+..... ...-......++....++..+|+-..|..||...++..++
T Consensus 133 ~~~~s~~l~~i~k~~~~d~~~~~-----------------~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~ 195 (725)
T KOG1093|consen 133 ELTESEYLEILLKYYTDDQELLS-----------------TAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRC 195 (725)
T ss_pred HHHHHHHHHHHHHhccCchhHHH-----------------HHHHHHHHHhhhHhHHHHhccCCccccccccchhHHhcCc
Confidence 88888888888775443322110 0111122235677889999999999999999999999998
Q ss_pred cccc
Q 015455 401 VSYQ 404 (406)
Q Consensus 401 ~f~~ 404 (406)
-|..
T Consensus 196 i~~e 199 (725)
T KOG1093|consen 196 SFTE 199 (725)
T ss_pred cHHH
Confidence 8764
No 476
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.40 E-value=0.0037 Score=60.91 Aligned_cols=77 Identities=19% Similarity=0.130 Sum_probs=50.2
Q ss_pred eeeeccCCceEEEEEEEccCCcEEEEEEEecC-----CCChHHHHHHHHHHHHHhhCC---CCCeeeEeeeeeecCCceE
Q 015455 121 IDKIGQGTYSNVYKAKDMLTGKIVALKKVRFD-----NLEPESVKFMAREILILRRLD---HPNVIKLEGLVTSRMSCSL 192 (406)
Q Consensus 121 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~~~~E~~~l~~l~---h~~iv~l~~~~~~~~~~~~ 192 (406)
.+.||.|.+..||++.....++.|+||.-... ...+-..++...|.+.|..+. ..++.+++.+ ++ ...
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~--~~~ 106 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DE--ELA 106 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CC--CCC
Confidence 46799999999999986433358999974311 101123455667888888763 2456666554 22 236
Q ss_pred EEEEecccc
Q 015455 193 YLVFHYMEH 201 (406)
Q Consensus 193 ~lv~e~~~~ 201 (406)
++|||++++
T Consensus 107 ~lVME~L~~ 115 (401)
T PRK09550 107 VTVMEDLSD 115 (401)
T ss_pred EEEEecCCC
Confidence 899999875
No 477
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.37 E-value=0.0011 Score=62.38 Aligned_cols=140 Identities=16% Similarity=0.135 Sum_probs=79.9
Q ss_pred eeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCC--eeeEeeee----eecCCceEE
Q 015455 120 KIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN--VIKLEGLV----TSRMSCSLY 193 (406)
Q Consensus 120 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~--iv~l~~~~----~~~~~~~~~ 193 (406)
-++.|..|....+|+... ++..+++|+... .. ...+..|+.++..+.+.. +.+++... .....+..+
T Consensus 18 ~i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~--~~---~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~ 90 (296)
T cd05153 18 SFEGISAGIENTNYFVTT--DSGRYVLTLFEK--VS---AEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPA 90 (296)
T ss_pred heecccCccccceEEEEe--CCCcEEEEEcCC--CC---hHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceE
Confidence 356777788889999863 345788998753 11 234556788777774322 34443211 001123468
Q ss_pred EEEecccccHHH----------------HhcC-CC--C------CCCHHHH----------HHHHHHHHHHHHHHHH---
Q 015455 194 LVFHYMEHDLAG----------------LAAS-PE--V------KFTEPQV----------KCYMHQLLSGLEHCHN--- 235 (406)
Q Consensus 194 lv~e~~~~~l~~----------------~~~~-~~--~------~~~~~~~----------~~~~~qi~~aL~~LH~--- 235 (406)
+++++++|.... ++.. .. . ...+... ......+..++.++.+
T Consensus 91 ~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~ 170 (296)
T cd05153 91 ALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDP 170 (296)
T ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhh
Confidence 999999873211 0100 00 0 0011000 0111123344455553
Q ss_pred ----CCCeeccCCCCCeEEcCCCcEEEeeeccccc
Q 015455 236 ----NGVLHRDIKGSNLLIDDDGVLKIADFGLASF 266 (406)
Q Consensus 236 ----~~ivHrDlkp~NIll~~~~~~kl~DFgla~~ 266 (406)
.+++|+|+.|.|||+++++.+.|+||+.+..
T Consensus 171 ~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 171 SDLPRGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred hcCCCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 3799999999999999887778999998753
No 478
>PRK05231 homoserine kinase; Provisional
Probab=97.35 E-value=0.004 Score=59.17 Aligned_cols=30 Identities=33% Similarity=0.522 Sum_probs=26.0
Q ss_pred CCeeccCCCCCeEEcCCCcEEEeeeccccc
Q 015455 237 GVLHRDIKGSNLLIDDDGVLKIADFGLASF 266 (406)
Q Consensus 237 ~ivHrDlkp~NIll~~~~~~kl~DFgla~~ 266 (406)
+++|+|+.|.|||++.+...-|+||+.+..
T Consensus 188 ~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 188 GVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred ccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 799999999999998665568999998753
No 479
>PRK10593 hypothetical protein; Provisional
Probab=97.26 E-value=0.009 Score=56.21 Aligned_cols=78 Identities=14% Similarity=0.142 Sum_probs=52.5
Q ss_pred ceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCC---CCeeeEeeeeeec-CCceEEE
Q 015455 119 EKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH---PNVIKLEGLVTSR-MSCSLYL 194 (406)
Q Consensus 119 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~l~~~~~~~-~~~~~~l 194 (406)
.-.+.||.|..+.||.... .++ .+.+|..+ ... ....+.+|...|+.|.. -.+.++++++... ..+..++
T Consensus 17 ~~~~~i~~G~~~~vy~~~~-~~~-~~~~k~~~-~~~---~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~L 90 (297)
T PRK10593 17 SRVECISEQPYAALWALYD-SQG-NPMPLMAR-SFS---TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVL 90 (297)
T ss_pred heeeecCCccceeEEEEEc-CCC-CEEEEEec-ccc---cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEE
Confidence 3457799999999999863 334 46777643 211 12457789999988843 3567777766542 2344799
Q ss_pred EEeccccc
Q 015455 195 VFHYMEHD 202 (406)
Q Consensus 195 v~e~~~~~ 202 (406)
|||++++.
T Consensus 91 VmE~i~G~ 98 (297)
T PRK10593 91 LLERLRGV 98 (297)
T ss_pred EEeccCCE
Confidence 99998863
No 480
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.13 E-value=0.0024 Score=60.17 Aligned_cols=29 Identities=31% Similarity=0.439 Sum_probs=26.1
Q ss_pred CCeeccCCCCCeEEcCC----CcEEEeeecccc
Q 015455 237 GVLHRDIKGSNLLIDDD----GVLKIADFGLAS 265 (406)
Q Consensus 237 ~ivHrDlkp~NIll~~~----~~~kl~DFgla~ 265 (406)
.++|+|+.|.|||++.+ +.+.++||..|.
T Consensus 180 ~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~ 212 (302)
T cd05156 180 VFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS 212 (302)
T ss_pred eEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence 58999999999999975 889999998775
No 481
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.13 E-value=0.0054 Score=57.03 Aligned_cols=31 Identities=26% Similarity=0.391 Sum_probs=25.7
Q ss_pred CCeeccCCCCCeEEcCCCc-EEEeeecccccc
Q 015455 237 GVLHRDIKGSNLLIDDDGV-LKIADFGLASFF 267 (406)
Q Consensus 237 ~ivHrDlkp~NIll~~~~~-~kl~DFgla~~~ 267 (406)
.++|+|++|.|||+++++. .-|+||+.+..-
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG 217 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKVG 217 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence 4899999999999997565 469999988643
No 482
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.12 E-value=0.0071 Score=57.19 Aligned_cols=141 Identities=17% Similarity=0.147 Sum_probs=78.8
Q ss_pred ceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCC--eeeEeeee----eecCCceE
Q 015455 119 EKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN--VIKLEGLV----TSRMSCSL 192 (406)
Q Consensus 119 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~--iv~l~~~~----~~~~~~~~ 192 (406)
..++.++.|....+|++.. .+| .+++|+.+... .. ..+..|.+++..|.... +.+++... .....+..
T Consensus 25 ~~i~~~~~G~~n~~y~v~t-~~~-~~vLK~~~~~~-~~---~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~ 98 (307)
T TIGR00938 25 LSLKGIAEGVENSNYLLTT-DVG-RYILTLYEKRV-KA---EELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKP 98 (307)
T ss_pred eeccccCCccccceEEEEe-CCC-cEEEEEecCCC-CH---HHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeE
Confidence 3466677887789999863 344 68889765422 12 23445677777763222 33332211 11113457
Q ss_pred EEEEecccccHH----------------HHhcC-CCC--------CCC-HHHH--H----------HHHHHHHHHHHHHH
Q 015455 193 YLVFHYMEHDLA----------------GLAAS-PEV--------KFT-EPQV--K----------CYMHQLLSGLEHCH 234 (406)
Q Consensus 193 ~lv~e~~~~~l~----------------~~~~~-~~~--------~~~-~~~~--~----------~~~~qi~~aL~~LH 234 (406)
+++++|++|... .++.. .+. .++ +... . .....+...++++.
T Consensus 99 ~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~ 178 (307)
T TIGR00938 99 ACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLD 178 (307)
T ss_pred EEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHH
Confidence 899999877311 01100 000 000 0000 0 01112334555554
Q ss_pred H-------CCCeeccCCCCCeEEcCCCcEEEeeecccc
Q 015455 235 N-------NGVLHRDIKGSNLLIDDDGVLKIADFGLAS 265 (406)
Q Consensus 235 ~-------~~ivHrDlkp~NIll~~~~~~kl~DFgla~ 265 (406)
. .+++|+|+.+.||+++.++...|+||+.+.
T Consensus 179 ~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 179 KFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred hhhhhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 3 589999999999999988877899999875
No 483
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.10 E-value=0.0092 Score=56.23 Aligned_cols=149 Identities=20% Similarity=0.232 Sum_probs=82.4
Q ss_pred cceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCC--CCeeeEeeeeeecCCceEEEE
Q 015455 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH--PNVIKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 118 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~l~~~~~~~~~~~~~lv 195 (406)
..+++.+-.|.--.+|... .+++.++++ ...............+|+.+|+.+.- -.+...+++|.+...+..|.|
T Consensus 27 ~~~v~~~~~G~sn~t~~~~--~~~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v 103 (321)
T COG3173 27 LLIVEEISGGWSNDTFRLG--DTGQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYV 103 (321)
T ss_pred CceeeeccCCcccceEEEe--cCCceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEE
Confidence 3444545333333445543 337888888 32212233445567778888888743 233344556655433457999
Q ss_pred EecccccHHHHhcCC------------------------------C--CCCCHHHHHHHHHHH--------------HHH
Q 015455 196 FHYMEHDLAGLAASP------------------------------E--VKFTEPQVKCYMHQL--------------LSG 229 (406)
Q Consensus 196 ~e~~~~~l~~~~~~~------------------------------~--~~~~~~~~~~~~~qi--------------~~a 229 (406)
|+|+.|......... . ..+...++..+..+. ..-
T Consensus 104 ~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~ 183 (321)
T COG3173 104 MEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRL 183 (321)
T ss_pred EEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHH
Confidence 999987211000000 0 001111222222222 122
Q ss_pred HHHHHHC--------CCeeccCCCCCeEEcCCCcEEEeeeccccccCC
Q 015455 230 LEHCHNN--------GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDP 269 (406)
Q Consensus 230 L~~LH~~--------~ivHrDlkp~NIll~~~~~~kl~DFgla~~~~~ 269 (406)
..+|+.+ .++|+|+.+.||+++.++-+=|.||+++..-++
T Consensus 184 ~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP 231 (321)
T COG3173 184 IKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGDP 231 (321)
T ss_pred HHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccCCc
Confidence 3344433 379999999999999998899999999976543
No 484
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.85 E-value=0.0099 Score=56.86 Aligned_cols=29 Identities=31% Similarity=0.668 Sum_probs=25.6
Q ss_pred CeeccCCCCCeEEcC-CCcEEEeeeccccc
Q 015455 238 VLHRDIKGSNLLIDD-DGVLKIADFGLASF 266 (406)
Q Consensus 238 ivHrDlkp~NIll~~-~~~~kl~DFgla~~ 266 (406)
.+|.|+.+.|||+++ ++.++++||..|..
T Consensus 184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag~ 213 (330)
T PLN02421 184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGSY 213 (330)
T ss_pred EEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence 799999999999975 57899999998854
No 485
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.82 E-value=0.02 Score=55.85 Aligned_cols=76 Identities=18% Similarity=0.184 Sum_probs=48.8
Q ss_pred eeeeeccCCceEEEEEEEccCCcEEEEEEEecCCC--C---hHHHHHHHHHHHHHhhCC---CCCeeeEeeeeeecCCce
Q 015455 120 KIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL--E---PESVKFMAREILILRRLD---HPNVIKLEGLVTSRMSCS 191 (406)
Q Consensus 120 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~---~~~~~~~~~E~~~l~~l~---h~~iv~l~~~~~~~~~~~ 191 (406)
..+.||.|.-..||+..+ .+..|+||.-..... . +....+...|.+.|+.+. ..++.+++.++.+ .
T Consensus 36 ~~~eiggGn~N~VyrV~~--~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded--~-- 109 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVS--SSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRT--M-- 109 (418)
T ss_pred eEEEcCCCceeeEEEEEc--CCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCC--C--
Confidence 367789999999999975 345688997542111 1 112334445677777664 2467777766653 2
Q ss_pred EEEEEecccc
Q 015455 192 LYLVFHYMEH 201 (406)
Q Consensus 192 ~~lv~e~~~~ 201 (406)
.+++||++++
T Consensus 110 ~vlvME~L~~ 119 (418)
T PLN02756 110 ALIGMRYLEP 119 (418)
T ss_pred CEEEEeecCC
Confidence 5778999966
No 486
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.60 E-value=0.02 Score=54.81 Aligned_cols=75 Identities=17% Similarity=0.175 Sum_probs=45.3
Q ss_pred eeccCCceEEEEEEEccCCcEEEEEEEe----c-CCCChHHHHHHHHHHHHHhhCC--CC-CeeeEeeeeeecCCceEEE
Q 015455 123 KIGQGTYSNVYKAKDMLTGKIVALKKVR----F-DNLEPESVKFMAREILILRRLD--HP-NVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 123 ~lg~G~~g~Vy~~~~~~~~~~vaiK~~~----~-~~~~~~~~~~~~~E~~~l~~l~--h~-~iv~l~~~~~~~~~~~~~l 194 (406)
.||.|....||++.....++.|+||.-. . ....+-..++...|.++|+... .| .+.+++.+ ++ ....+
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~--e~~~~ 77 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DT--EMAVT 77 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--cc--cccee
Confidence 5788999999999864333679999642 1 1111223344456888887763 34 44555332 32 22568
Q ss_pred EEecccc
Q 015455 195 VFHYMEH 201 (406)
Q Consensus 195 v~e~~~~ 201 (406)
+||+++.
T Consensus 78 vMEdL~~ 84 (370)
T TIGR01767 78 VMEDLSH 84 (370)
T ss_pred hHhhCcc
Confidence 9998853
No 487
>PLN02236 choline kinase
Probab=96.58 E-value=0.025 Score=54.40 Aligned_cols=137 Identities=15% Similarity=0.190 Sum_probs=75.7
Q ss_pred eeeeccCCceEEEEEEEcc----CCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCe-eeEeeeeeecCCceEEEE
Q 015455 121 IDKIGQGTYSNVYKAKDML----TGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV-IKLEGLVTSRMSCSLYLV 195 (406)
Q Consensus 121 ~~~lg~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~l~~~~~~~~~~~~~lv 195 (406)
+..|-.|-...+|++.... .++.|++|+..... .... ...+|..++..+...++ .++++.+.. + .+
T Consensus 41 i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t--~~~i-dR~~E~~~~~~l~~~gl~P~~~~~~~~--g----~v 111 (344)
T PLN02236 41 VIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV--ELFF-DRDDEIRTFECMSRHGQGPRLLGRFPN--G----RV 111 (344)
T ss_pred EEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC--Ceee-chHHHHHHHHHHHHcCCCCceEEEECC--c----eE
Confidence 3455558888999986422 24689999765432 1111 23558888888754333 234444422 2 46
Q ss_pred EecccccHHH-------------------HhcC--CCC--CCCHHHHHHHHHHH-----------------HHHHHHHH-
Q 015455 196 FHYMEHDLAG-------------------LAAS--PEV--KFTEPQVKCYMHQL-----------------LSGLEHCH- 234 (406)
Q Consensus 196 ~e~~~~~l~~-------------------~~~~--~~~--~~~~~~~~~~~~qi-----------------~~aL~~LH- 234 (406)
.+|+++..+. ++.. ... ......+..++.++ ...+..|.
T Consensus 112 ~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~ 191 (344)
T PLN02236 112 EEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEK 191 (344)
T ss_pred EEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHH
Confidence 7777652211 0000 000 11233333443222 11122221
Q ss_pred -------HCCCeeccCCCCCeEEcC-CCcEEEeeeccccc
Q 015455 235 -------NNGVLHRDIKGSNLLIDD-DGVLKIADFGLASF 266 (406)
Q Consensus 235 -------~~~ivHrDlkp~NIll~~-~~~~kl~DFgla~~ 266 (406)
...++|+|+++.|||+++ ++.+.++||..|..
T Consensus 192 ~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 192 ELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred HhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 125899999999999986 47899999998864
No 488
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.32 E-value=0.054 Score=51.27 Aligned_cols=30 Identities=27% Similarity=0.309 Sum_probs=27.6
Q ss_pred CCeeccCCCCCeEEcCCCcEEEeeeccccc
Q 015455 237 GVLHRDIKGSNLLIDDDGVLKIADFGLASF 266 (406)
Q Consensus 237 ~ivHrDlkp~NIll~~~~~~kl~DFgla~~ 266 (406)
+++|+|+.+.|||++.++.+-++||..+..
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred eeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 799999999999999999999999998764
No 489
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=96.06 E-value=0.017 Score=54.82 Aligned_cols=73 Identities=22% Similarity=0.327 Sum_probs=59.6
Q ss_pred CCceEEEEEecccccHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCCeEEcCCCcEEEeeeccccc
Q 015455 188 MSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN-GVLHRDIKGSNLLIDDDGVLKIADFGLASF 266 (406)
Q Consensus 188 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFgla~~ 266 (406)
...+.|++|++-++.+...- .-..+++..++.+.+..++-|... ..-|||+.-.||||+ +|+|-|+||-+++.
T Consensus 297 e~~y~yl~~kdhgt~is~ik-----~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl 370 (488)
T COG5072 297 ETLYLYLHFKDHGTPISIIK-----ADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRL 370 (488)
T ss_pred CceEEEEEEecCCceeeeee-----cccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeec
Confidence 35678888888776544321 235788889999999988888876 799999999999999 99999999999984
No 490
>PRK12396 5-methylribose kinase; Reviewed
Probab=95.99 E-value=0.04 Score=53.46 Aligned_cols=77 Identities=18% Similarity=0.148 Sum_probs=48.2
Q ss_pred eeeeccCCceEEEEEEEccCCcEEEEEEEe----cCCCChHHHHHHHHHHHHHhhCC--CC-CeeeEeeeeeecCCceEE
Q 015455 121 IDKIGQGTYSNVYKAKDMLTGKIVALKKVR----FDNLEPESVKFMAREILILRRLD--HP-NVIKLEGLVTSRMSCSLY 193 (406)
Q Consensus 121 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~----~~~~~~~~~~~~~~E~~~l~~l~--h~-~iv~l~~~~~~~~~~~~~ 193 (406)
.+.||.|.-.-||++.+...++.|+||.-. .....+-..++...|.++|+.+. .| ++.+++.+ ++ ....
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~--e~~~ 109 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DS--VMNC 109 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--Cc--HHhh
Confidence 678899999999999863335679999632 22112233455566888888763 34 45556332 32 2256
Q ss_pred EEEecccc
Q 015455 194 LVFHYMEH 201 (406)
Q Consensus 194 lv~e~~~~ 201 (406)
+|||+++.
T Consensus 110 ~vMEdL~~ 117 (409)
T PRK12396 110 CVMEDLSD 117 (409)
T ss_pred HHHHhCcc
Confidence 88888753
No 491
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=95.99 E-value=0.075 Score=49.63 Aligned_cols=76 Identities=16% Similarity=0.194 Sum_probs=43.6
Q ss_pred cceeeeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCC---CCCeeeEeeeeeecCCceEEE
Q 015455 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD---HPNVIKLEGLVTSRMSCSLYL 194 (406)
Q Consensus 118 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~l~~~~~~~~~~~~~l 194 (406)
.+-.+.++-|....+|+.. .+++.+.||+-... ....+..|.+-|+.|. --.+.+++++...... -|+
T Consensus 19 i~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~-----~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~--~fL 89 (288)
T PF03881_consen 19 ITSIEPVSGGDINEAYRLD--TDGGSYFVKVNSES-----GRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDD--AFL 89 (288)
T ss_dssp --EEEEE--SSSSEEEEEE--TTS-EEEEEEEEGG-----GCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSC--CEE
T ss_pred eeeeEecCCCChhheEEEE--CCCccEEEEecChh-----hHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCC--ceE
Confidence 3456778889999999986 78889999987622 2234666777777773 3445566666554333 489
Q ss_pred EEeccccc
Q 015455 195 VFHYMEHD 202 (406)
Q Consensus 195 v~e~~~~~ 202 (406)
+|||++.+
T Consensus 90 lle~l~~~ 97 (288)
T PF03881_consen 90 LLEFLEMG 97 (288)
T ss_dssp EEE-----
T ss_pred EEEeecCC
Confidence 99998754
No 492
>PRK06148 hypothetical protein; Provisional
Probab=95.85 E-value=0.25 Score=54.54 Aligned_cols=31 Identities=35% Similarity=0.597 Sum_probs=26.3
Q ss_pred CCCeeccCCCCCeEEcCCC--cEE-Eeeeccccc
Q 015455 236 NGVLHRDIKGSNLLIDDDG--VLK-IADFGLASF 266 (406)
Q Consensus 236 ~~ivHrDlkp~NIll~~~~--~~k-l~DFgla~~ 266 (406)
.++||.|+.+.|||++.++ ++. |+|||.+..
T Consensus 203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 203 AQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred cceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 4799999999999999875 565 999998753
No 493
>PTZ00384 choline kinase; Provisional
Probab=95.81 E-value=0.038 Score=53.81 Aligned_cols=30 Identities=27% Similarity=0.263 Sum_probs=24.6
Q ss_pred CCCeeccCCCCCeEEcCCCcEEEeeeccccc
Q 015455 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASF 266 (406)
Q Consensus 236 ~~ivHrDlkp~NIll~~~~~~kl~DFgla~~ 266 (406)
...+|.|+-+.||+.+ ++.+.++||..|..
T Consensus 227 ~VfCHNDL~~gNIL~~-~~~l~lID~EYA~~ 256 (383)
T PTZ00384 227 VLFCHNDLFFTNILDF-NQGIYFIDFDFAGF 256 (383)
T ss_pred eeeeeccCCcccEEec-CCCEEEEEeccccC
Confidence 3579999999999975 45699999987753
No 494
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.74 E-value=0.074 Score=50.62 Aligned_cols=137 Identities=19% Similarity=0.249 Sum_probs=78.4
Q ss_pred eeeccCCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCC------eeeEeeeeeecCC--ceEE
Q 015455 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN------VIKLEGLVTSRMS--CSLY 193 (406)
Q Consensus 122 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~l~~~~~~~~~--~~~~ 193 (406)
..|.+ .-..||+... .+|+ +++|+.+.. ... ..+..|...|..|.-.. +..+-|-....-. .+.+
T Consensus 32 ~~l~s-~eN~~f~~~~-~~g~-~iLki~~~~-~~~---~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a 104 (331)
T COG2334 32 RGLNS-EENSNFRVQT-EDGR-YILKIYRPG-WTR---AEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPA 104 (331)
T ss_pred ccccc-ccCceEEEEe-cCCC-eEEEEecCC-CCH---HHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeE
Confidence 34444 5567899863 4444 489988765 332 34555788888773211 2333332221112 3788
Q ss_pred EEEecccccHHHH-----------------hc-CCCC---------CCCHH-------------HHHHHHHHHHHHHHHH
Q 015455 194 LVFHYMEHDLAGL-----------------AA-SPEV---------KFTEP-------------QVKCYMHQLLSGLEHC 233 (406)
Q Consensus 194 lv~e~~~~~l~~~-----------------~~-~~~~---------~~~~~-------------~~~~~~~qi~~aL~~L 233 (406)
-+++|++|..... .. .++. ...|. .-.....++...+..+
T Consensus 105 ~lf~~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~ 184 (331)
T COG2334 105 ALFEYLPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRL 184 (331)
T ss_pred EEEEecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHH
Confidence 8999998743320 00 0000 11121 0012334455555555
Q ss_pred HHC--------C--CeeccCCCCCeEEcCCCc-EEEeeecccc
Q 015455 234 HNN--------G--VLHRDIKGSNLLIDDDGV-LKIADFGLAS 265 (406)
Q Consensus 234 H~~--------~--ivHrDlkp~NIll~~~~~-~kl~DFgla~ 265 (406)
.+. + +||+|+.|.||+++.+.. +-+.||+-+.
T Consensus 185 ~~~~~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 185 LARLPAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred HhhchhhCCcccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence 542 4 999999999999998885 8999999775
No 495
>PTZ00296 choline kinase; Provisional
Probab=95.68 E-value=0.098 Score=51.99 Aligned_cols=93 Identities=13% Similarity=0.192 Sum_probs=52.4
Q ss_pred hhhhcccccCCCCcccCCcceeeeeccCCceEEEEEEEccC--------CcEEEEEEEecCCCChHHHHHHHHHHHHHhh
Q 015455 100 TAVCGEALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLT--------GKIVALKKVRFDNLEPESVKFMAREILILRR 171 (406)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~--------~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~ 171 (406)
...|.+...+|.....++. -++.|..|-.-.+|++..... ++.|.+++.-... .. .-...+|..++..
T Consensus 90 ~~i~~~~vp~W~~~~~~~I-~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~t--e~-lIdR~~E~~v~~~ 165 (442)
T PTZ00296 90 KKICLEKVPEWRRFTEDDV-RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDV--DE-LYNPISEFEVYKT 165 (442)
T ss_pred HHHHHHHCCccccCCcccE-EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCc--cc-eeCHHHHHHHHHH
Confidence 3444555666764333455 566677788888999874321 4678888764322 11 1123457777777
Q ss_pred CCCCCee-eEeeeeeecCCceEEEEEeccccc
Q 015455 172 LDHPNVI-KLEGLVTSRMSCSLYLVFHYMEHD 202 (406)
Q Consensus 172 l~h~~iv-~l~~~~~~~~~~~~~lv~e~~~~~ 202 (406)
+...+|- ++++.+. + +.+.+|++|.
T Consensus 166 ls~~gi~P~l~~~f~---g---g~I~efi~g~ 191 (442)
T PTZ00296 166 MSKYRIAPQLLNTFS---G---GRIEEWLYGD 191 (442)
T ss_pred HHHCCCCCceEEEeC---C---CEEEEeeCCc
Confidence 7543332 3444432 1 3567887753
No 496
>PRK11768 serine/threonine protein kinase; Provisional
Probab=94.91 E-value=1.1 Score=42.59 Aligned_cols=27 Identities=30% Similarity=0.247 Sum_probs=23.4
Q ss_pred CCeeccCCCCCeEEcCCCcEEEeeecccc
Q 015455 237 GVLHRDIKGSNLLIDDDGVLKIADFGLAS 265 (406)
Q Consensus 237 ~ivHrDlkp~NIll~~~~~~kl~DFgla~ 265 (406)
+++|+|+.+.|||++ + .+.|+||+.+.
T Consensus 197 ~liHgD~h~~NvL~~-d-~~~iIDFDd~~ 223 (325)
T PRK11768 197 LRLHGDCHPGNILWR-D-GPHFVDLDDAR 223 (325)
T ss_pred cceecCCCchhcccc-C-CcEEEeCCCCC
Confidence 689999999999995 4 57899999775
No 497
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=94.72 E-value=0.19 Score=44.67 Aligned_cols=116 Identities=17% Similarity=0.200 Sum_probs=70.7
Q ss_pred CCceEEEEEEEccCCcEEEEEEEecCCCChHHHHHHHHHHHHHhhCCCCCeeeEeeeeeecCCceEEEEEecccccHHHH
Q 015455 127 GTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGL 206 (406)
Q Consensus 127 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~~l~~~ 206 (406)
|+.++.-.++... | +..+|+++.....- ....+..+..++.++. .|+++.. + ....+-++.|+|..-
T Consensus 73 ~gNsTl~~~kt~i-G-~L~lKKi~slp~~~-~~~~y~nky~v~Armh--GilrL~N---D-n~~~yGvIlE~Cy~~---- 139 (308)
T PF07387_consen 73 NGNSTLLIGKTKI-G-PLFLKKIRSLPCCI-NDALYFNKYRVFARMH--GILRLKN---D-NNYKYGVILERCYKI---- 139 (308)
T ss_pred CCceEEEEecccc-c-hhhhhhccCCCccc-chhhhhhhhhHHHHhh--heeEeec---C-CCceeEEEEeeccCc----
Confidence 4455555554322 3 45567665433321 2334567888887763 4666642 2 344466888877531
Q ss_pred hcCCCCCCCHHHHHHHHHHHHHHHHHHHHC--CCeeccCCCCCeEEcCCCcEEEeeeccc
Q 015455 207 AASPEVKFTEPQVKCYMHQLLSGLEHCHNN--GVLHRDIKGSNLLIDDDGVLKIADFGLA 264 (406)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~--~ivHrDlkp~NIll~~~~~~kl~DFgla 264 (406)
... -..++.-=+++|.-.|+. +.+|+|..|+||+-|..|.+||.|-+..
T Consensus 140 --------~i~-~~N~i~agi~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVDP~~L 190 (308)
T PF07387_consen 140 --------KIN-FSNFITAGIKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVDPVCL 190 (308)
T ss_pred --------ccc-hhHHHHHhHHHHHHhhccCCCeecCCCChhheeecCCCCEEecChhhh
Confidence 000 012222225677778853 7999999999999999999999997643
No 498
>PHA03111 Ser/Thr kinase; Provisional
Probab=94.61 E-value=0.036 Score=51.92 Aligned_cols=53 Identities=23% Similarity=0.261 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHHHH----CCCeeccCCCCCeEEcCCC------------------cEEEeeeccccccC
Q 015455 216 EPQVKCYMHQLLSGLEHCHN----NGVLHRDIKGSNLLIDDDG------------------VLKIADFGLASFFD 268 (406)
Q Consensus 216 ~~~~~~~~~qi~~aL~~LH~----~~ivHrDlkp~NIll~~~~------------------~~kl~DFgla~~~~ 268 (406)
.+-++.++.||+.-.-..-+ .+.+|-||||+|||+-+.. .++|.||.++...+
T Consensus 278 ~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv~~ 352 (444)
T PHA03111 278 VEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDSDEPISITLKDATYVFNEPIKACLNDFDFSQVAN 352 (444)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecCCCcEEEEECCeEEEeccchhhhhcccCHHHHcc
Confidence 45567788898876644433 3699999999999994332 35778888876543
No 499
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=94.35 E-value=0.086 Score=49.73 Aligned_cols=29 Identities=28% Similarity=0.521 Sum_probs=25.5
Q ss_pred CCCeeccCCCCCeEEcCCCcEEEeeecccc
Q 015455 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLAS 265 (406)
Q Consensus 236 ~~ivHrDlkp~NIll~~~~~~kl~DFgla~ 265 (406)
.+++|+|+.+.||+++. +.+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 47899999999999987 678999999764
No 500
>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=94.20 E-value=0.039 Score=51.98 Aligned_cols=53 Identities=25% Similarity=0.231 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHHH---H-HCCCeeccCCCCCeEEcCCC------------------cEEEeeeccccccC
Q 015455 216 EPQVKCYMHQLLSGLEHC---H-NNGVLHRDIKGSNLLIDDDG------------------VLKIADFGLASFFD 268 (406)
Q Consensus 216 ~~~~~~~~~qi~~aL~~L---H-~~~ivHrDlkp~NIll~~~~------------------~~kl~DFgla~~~~ 268 (406)
..-++.++.||+.-.--. - ..+.+|-||||+|||+-+.. .++|.||.+|...+
T Consensus 274 ~~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv~~ 348 (434)
T PF05445_consen 274 VEYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFDSKEPIRIKFGNRNYVFKEPIRCCLNDFDFSQVAN 348 (434)
T ss_pred HHHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEecCCCceEEEECCeEEEecccceeeecccCHHHhcc
Confidence 455677778887654222 2 34799999999999984332 46888999887654
Done!