Your job contains 1 sequence.
>015457
MTENLSGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKL
ESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT
AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN
LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS
DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKN
LRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRI
TSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFRPE
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015457
(406 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2036199 - symbol:AT1G15740 species:3702 "Arabi... 1346 1.7e-137 1
TAIR|locus:2138131 - symbol:AT4G23840 "AT4G23840" species... 240 5.3e-18 1
UNIPROTKB|F1NMM1 - symbol:FBXL14 "Uncharacterized protein... 208 8.6e-15 1
UNIPROTKB|Q17R01 - symbol:FBXL14 "F-box/LRR-repeat protei... 206 2.8e-14 1
MGI|MGI:2141676 - symbol:Fbxl14 "F-box and leucine-rich r... 206 2.8e-14 1
RGD|1305523 - symbol:Fbxl14 "F-box and leucine-rich repea... 206 2.8e-14 1
UNIPROTKB|Q8N1E6 - symbol:FBXL14 "F-box/LRR-repeat protei... 206 3.2e-14 1
ZFIN|ZDB-GENE-030131-3556 - symbol:fbxl14b "F-box and leu... 202 8.3e-14 1
ZFIN|ZDB-GENE-030131-5920 - symbol:fbxl14a "F-box and leu... 191 1.8e-12 1
FB|FBgn0020257 - symbol:ppa "partner of paired" species:7... 186 1.2e-11 1
TAIR|locus:2143320 - symbol:AT5G27920 "AT5G27920" species... 185 2.1e-11 1
UNIPROTKB|F1NKM1 - symbol:FBXL14 "Uncharacterized protein... 160 3.3e-11 1
WB|WBGene00015350 - symbol:C02F5.7 species:6239 "Caenorha... 180 4.4e-11 1
DICTYBASE|DDB_G0291424 - symbol:DDB_G0291424 "Transcripti... 184 4.6e-11 1
UNIPROTKB|Q723K6 - symbol:inlA "Internalin-A" species:265... 178 1.8e-10 1
TAIR|locus:2149805 - symbol:AT5G01720 "AT5G01720" species... 173 5.1e-10 1
MGI|MGI:2448488 - symbol:Fbxl16 "F-box and leucine-rich r... 168 1.1e-09 1
UNIPROTKB|Q723P8 - symbol:inlF "Internalin" species:26566... 165 5.5e-09 1
TAIR|locus:2145512 - symbol:EBF2 "EIN3-binding F box prot... 163 6.1e-09 1
UNIPROTKB|Q723V1 - symbol:LMOf2365_0374 "Internalin" spec... 158 2.0e-08 1
DICTYBASE|DDB_G0288031 - symbol:DDB_G0288031 "putative ac... 164 2.3e-08 1
TAIR|locus:2005629 - symbol:AT1G75640 species:3702 "Arabi... 154 1.4e-07 1
ZFIN|ZDB-GENE-060421-8264 - symbol:zgc:136791 "zgc:136791... 152 1.8e-07 1
UNIPROTKB|Q58DG6 - symbol:FBXL20 "F-box/LRR-repeat protei... 141 2.8e-07 2
UNIPROTKB|Q96IG2 - symbol:FBXL20 "F-box/LRR-repeat protei... 141 2.8e-07 2
MGI|MGI:1919444 - symbol:Fbxl20 "F-box and leucine-rich r... 141 2.8e-07 2
RGD|1562655 - symbol:Tlr13 "toll-like receptor 13" specie... 149 4.2e-07 1
TAIR|locus:2040105 - symbol:EBF1 "AT2G25490" species:3702... 144 8.1e-07 1
MGI|MGI:107935 - symbol:Lrig1 "leucine-rich repeats and i... 146 1.0e-06 1
TAIR|locus:2076376 - symbol:AT3G58530 species:3702 "Arabi... 137 1.8e-06 1
UNIPROTKB|F1NHD2 - symbol:FBXL2 "Uncharacterized protein"... 138 2.0e-06 1
MGI|MGI:3045213 - symbol:Tlr13 "toll-like receptor 13" sp... 148 2.1e-06 2
UNIPROTKB|E1BSN1 - symbol:CMIP "Uncharacterized protein" ... 141 2.1e-06 1
MGI|MGI:1921690 - symbol:Cmip "c-Maf inducing protein" sp... 141 2.3e-06 1
UNIPROTKB|Q8IY22 - symbol:CMIP "C-Maf-inducing protein" s... 141 2.3e-06 1
MGI|MGI:2443416 - symbol:Fbxl13 "F-box and leucine-rich r... 141 2.4e-06 1
UNIPROTKB|Q9UKC9 - symbol:FBXL2 "F-box/LRR-repeat protein... 137 2.6e-06 1
UNIPROTKB|Q5R3Z8 - symbol:FBXL2 "F-box/LRR-repeat protein... 137 2.6e-06 1
UNIPROTKB|F1PWK1 - symbol:FBXL2 "Uncharacterized protein"... 136 3.4e-06 1
UNIPROTKB|A6H779 - symbol:FBXL2 "F-box/LRR-repeat protein... 136 3.4e-06 1
UNIPROTKB|Q81YT0 - symbol:BAS0520 "Putative internalin" s... 141 3.5e-06 1
TIGR_CMR|BA_0552 - symbol:BA_0552 "internalin, putative" ... 141 3.5e-06 1
UNIPROTKB|B6UHV2 - symbol:B6UHV2 "Transport inhibitor res... 106 6.3e-06 2
UNIPROTKB|Q5LMY8 - symbol:SPO3424 "Leucine rich repeat pr... 135 6.8e-06 1
TIGR_CMR|SPO_3424 - symbol:SPO_3424 "leucine rich repeat ... 135 6.8e-06 1
RGD|1562243 - symbol:Fbxl2 "F-box and leucine-rich repeat... 133 7.3e-06 1
MGI|MGI:1919429 - symbol:Fbxl2 "F-box and leucine-rich re... 133 7.3e-06 1
UNIPROTKB|Q724E1 - symbol:inlE "Internalin E" species:265... 134 7.4e-06 1
TAIR|locus:2136313 - symbol:AT4G39270 species:3702 "Arabi... 137 7.5e-06 1
TAIR|locus:2079721 - symbol:AT3G07550 "AT3G07550" species... 132 8.4e-06 1
TAIR|locus:2025012 - symbol:RLP1 "AT1G07390" species:3702... 124 1.3e-05 2
RGD|1308668 - symbol:Lingo1 "leucine rich repeat and Ig d... 125 2.7e-05 2
TAIR|locus:2166978 - symbol:AT5G23340 species:3702 "Arabi... 118 3.1e-05 2
UNIPROTKB|Q724E3 - symbol:inlC2 "Internalin C2" species:2... 129 3.1e-05 1
MGI|MGI:1915522 - symbol:Lingo1 "leucine rich repeat and ... 125 4.3e-05 2
UNIPROTKB|G3V881 - symbol:Lingo1 "Leucine rich repeat neu... 125 4.4e-05 2
FB|FBgn0034083 - symbol:lbk "lambik" species:7227 "Drosop... 136 4.8e-05 2
UNIPROTKB|P25147 - symbol:inlB "Internalin B" species:169... 128 4.8e-05 1
UNIPROTKB|Q724E2 - symbol:inlD "Internalin D" species:265... 127 5.4e-05 1
UNIPROTKB|F1PGX0 - symbol:LINGO1 "Uncharacterized protein... 124 5.7e-05 2
TAIR|locus:2125527 - symbol:GRH1 "AT4G03190" species:3702... 89 5.9e-05 2
ZFIN|ZDB-GENE-050208-711 - symbol:si:ch211-213a13.5 "si:c... 123 5.9e-05 2
TAIR|locus:2171963 - symbol:RLP55 "receptor like protein ... 123 9.7e-05 1
UNIPROTKB|Q96JA1 - symbol:LRIG1 "Leucine-rich repeats and... 128 9.8e-05 1
ZFIN|ZDB-GENE-070912-120 - symbol:si:ch211-156p11.1 "si:c... 126 0.00012 1
TAIR|locus:2025222 - symbol:SKP2B "AT1G77000" species:370... 120 0.00016 1
UNIPROTKB|F1MT22 - symbol:LGR5 "Uncharacterized protein" ... 125 0.00017 1
TAIR|locus:2176397 - symbol:AT5G22320 species:3702 "Arabi... 121 0.00018 1
TAIR|locus:2154709 - symbol:PSKR2 "phytosylfokine-alpha r... 130 0.00018 2
UNIPROTKB|F1MBT2 - symbol:LINGO1 "Uncharacterized protein... 119 0.00020 2
UNIPROTKB|F1SJ87 - symbol:LINGO1 "Uncharacterized protein... 119 0.00020 2
UNIPROTKB|Q720D2 - symbol:LMOf2365_1307 "Putative unchara... 122 0.00021 1
ZFIN|ZDB-GENE-030131-7850 - symbol:anp32a "acidic (leucin... 116 0.00023 1
WB|WBGene00006366 - symbol:sym-1 species:6239 "Caenorhabd... 123 0.00024 2
TAIR|locus:2204350 - symbol:CLV1 "AT1G75820" species:3702... 119 0.00024 2
UNIPROTKB|A4KA30 - symbol:TIR1 "Transport inhibitor respo... 101 0.00025 2
UNIPROTKB|Q96FE5 - symbol:LINGO1 "Leucine-rich repeat and... 119 0.00026 2
UNIPROTKB|Q722U0 - symbol:LMOf2365_0639 "LPXTG-motif cell... 121 0.00026 1
RGD|1307733 - symbol:Lgr5 "leucine rich repeat containing... 123 0.00028 1
UNIPROTKB|F1LRE2 - symbol:Igfals "Insulin-like growth fac... 121 0.00029 2
TAIR|locus:2013825 - symbol:TMK1 "transmembrane kinase 1"... 123 0.00029 1
FB|FBgn0034540 - symbol:Lrt "Leucine-rich tendon-specific... 122 0.00031 1
UNIPROTKB|E1C2F8 - symbol:LGR5 "Uncharacterized protein" ... 118 0.00034 2
TAIR|locus:2131518 - symbol:AT4G26540 species:3702 "Arabi... 123 0.00035 1
UNIPROTKB|E1C2A1 - symbol:E1C2A1 "Uncharacterized protein... 113 0.00043 1
TAIR|locus:2005498 - symbol:BRI1 "BRASSINOSTEROID INSENSI... 111 0.00043 2
UNIPROTKB|A5H649 - symbol:TLR3 "Toll-like receptor 3" spe... 121 0.00046 1
UNIPROTKB|F1MJZ4 - symbol:IGFALS "Uncharacterized protein... 119 0.00046 1
WB|WBGene00017138 - symbol:EEED8.10 species:6239 "Caenorh... 120 0.00046 1
MGI|MGI:1195456 - symbol:Rnh1 "ribonuclease/angiogenin in... 102 0.00051 2
FB|FBgn0259677 - symbol:CG42346 species:7227 "Drosophila ... 123 0.00055 1
UNIPROTKB|Q86WI3 - symbol:NLRC5 "Protein NLRC5" species:9... 113 0.00061 3
UNIPROTKB|Q28XE2 - symbol:Anp32a "Acidic leucine-rich nuc... 112 0.00066 1
WB|WBGene00011637 - symbol:T09A5.9 species:6239 "Caenorha... 105 0.00070 2
TAIR|locus:2046515 - symbol:RLP24 "receptor like protein ... 107 0.00071 2
UNIPROTKB|O75473 - symbol:LGR5 "Leucine-rich repeat-conta... 124 0.00075 2
UNIPROTKB|C4PCK0 - symbol:TLR5 "TLR5" species:9031 "Gallu... 104 0.00079 3
UNIPROTKB|Q50L44 - symbol:LINGO1 "Leucine-rich repeat and... 119 0.00080 2
RGD|68429 - symbol:Igfals "insulin-like growth factor bin... 117 0.00080 2
DICTYBASE|DDB_G0284039 - symbol:pprA "Protein phosphatase... 113 0.00084 1
WARNING: Descriptions of 6 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2036199 [details] [associations]
symbol:AT1G15740 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] EMBL:CP002684
GenomeReviews:CT485782_GR HSSP:P25147 eggNOG:NOG69615
UniGene:At.48194 UniGene:At.69991 EMBL:AY142631 IPI:IPI00545317
RefSeq:NP_563980.2 ProteinModelPortal:Q8H1Q4 SMR:Q8H1Q4
STRING:Q8H1Q4 EnsemblPlants:AT1G15740.1 GeneID:838143
KEGG:ath:AT1G15740 TAIR:At1g15740 HOGENOM:HOG000239257
InParanoid:Q8H1Q4 OMA:GSNGLRH PhylomeDB:Q8H1Q4
ProtClustDB:CLSN2679913 Genevestigator:Q8H1Q4 Uniprot:Q8H1Q4
Length = 585
Score = 1346 (478.9 bits), Expect = 1.7e-137, P = 1.7e-137
Identities = 266/392 (67%), Positives = 308/392 (78%)
Query: 16 FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSD 75
FRRN AITAQGM+A + L+NL KLDLE+C I GGLV+L+ L KLESLNIKWCNCITD+D
Sbjct: 194 FRRNAAITAQGMRALSNLVNLKKLDLEKCPGIDGGLVHLRALTKLESLNIKWCNCITDAD 253
Query: 76 MKPLSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCP-VTAACLDSLSALGSLF 134
M+PLS LTNL+SLQI CSK+TD GI+Y EGC VTAACLD+L+AL L
Sbjct: 254 MEPLSVLTNLRSLQICCSKITDIGISYLKGLNKLNLLNLEGCRHVTAACLDTLTALAGLM 313
Query: 135 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 194
YLNLNRC SD GCEKFS + +LK+LNLG N IT+ CLVHLKGLT LESLNLDSC IGDE
Sbjct: 314 YLNLNRCNFSDSGCEKFSDLINLKILNLGMNNITNSCLVHLKGLTKLESLNLDSCRIGDE 373
Query: 195 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 254
GLV+L+G+ LK LELSDT+VGS+GLRHLSGL+NLESINLSFT ++D LRKL+GL+SL+
Sbjct: 374 GLVHLSGMLELKSLELSDTEVGSNGLRHLSGLSNLESINLSFTVVTDSGLRKLSGLTSLR 433
Query: 255 SLNLDARQIXXXXXXXXXXXXXXXXXDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA 314
+LNLDAR + DLFGARITDSG +LRN K L+SLEICGGGLTD
Sbjct: 434 TLNLDARHVTDAGLSALTSLTGLTHLDLFGARITDSGTNHLRNLKKLQSLEICGGGLTDT 493
Query: 315 GVKHIKDXXXXXXXXXXXXXXXTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNL 374
GVK+IKD TDKTLELISGLTGLVSLNVSNSR++S+GLRHLKPLKNL
Sbjct: 494 GVKNIKDLSSLTLLNLSQNSNLTDKTLELISGLTGLVSLNVSNSRVSSSGLRHLKPLKNL 553
Query: 375 RSLTLESCKVTANDIKRLQSRDLPNLVSFRPE 406
RSLTLESCK++ANDI++LQ+ DLPNLV+FRPE
Sbjct: 554 RSLTLESCKLSANDIRKLQATDLPNLVNFRPE 585
Score = 392 (143.0 bits), Expect = 3.4e-36, P = 3.4e-36
Identities = 113/369 (30%), Positives = 173/369 (46%)
Query: 35 NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSK 94
+L+ +D GLV+LKG LESLN +C+ I++ + LSGL+NL SL +
Sbjct: 139 SLLSVDFSGSDITDSGLVSLKGCTNLESLNFNFCDQISNRGLVHLSGLSNLTSLSFRRNA 198
Query: 95 -VTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFS 152
+T G+ E CP L L AL L LN+ C ++D E S
Sbjct: 199 AITAQGMRALSNLVNLKKLDLEKCPGIDGGLVHLRALTKLESLNIKWCNCITDADMEPLS 258
Query: 153 KIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELS 211
+ +L+ L + ++ITD + +LKGL L LNL+ C + L LT L L L L+
Sbjct: 259 VLTNLRSLQICCSKITDIGISYLKGLNKLNLLNLEGCRHVTAACLDTLTALAGLMYLNLN 318
Query: 212 DTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIXXXXXXXX 271
SG S L NL+ +NL I++ L L GL+ L+SLNLD+ +I
Sbjct: 319 RCNFSDSGCEKFSDLINLKILNLGMNNITNSCLVHLKGLTKLESLNLDSCRIGDEGLVHL 378
Query: 272 XXXXXXXXXDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDXXXXXXXXXX 331
+L + +G +L NL S+ + +TD+G++ +
Sbjct: 379 SGMLELKSLELSDTEVGSNGLRHLSGLSNLESINLSFTVVTDSGLRKLSGLTSLRTLNLD 438
Query: 332 XXXXXTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKR 391
TD L ++ LTGL L++ +RIT +G HL+ LK L+SL + +T +K
Sbjct: 439 ARHV-TDAGLSALTSLTGLTHLDLFGARITDSGTNHLRNLKKLQSLEICGGGLTDTGVKN 497
Query: 392 LQSRDLPNL 400
+ +DL +L
Sbjct: 498 I--KDLSSL 504
Score = 373 (136.4 bits), Expect = 5.2e-34, P = 5.2e-34
Identities = 113/389 (29%), Positives = 178/389 (45%)
Query: 22 ITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPLS 80
I+ +G+ +GL NL L R I G+ L L+ L+ L+++ C I D + L
Sbjct: 175 ISNRGLVHLSGLSNLTSLSFRRNAAITAQGMRALSNLVNLKKLDLEKCPGI-DGGLVHLR 233
Query: 81 GLTNLKSLQIS-CSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLNLN 139
LT L+SL I C+ +TD+ + +T + L L L LNL
Sbjct: 234 ALTKLESLNIKWCNCITDADMEPLSVLTNLRSLQICCSKITDIGISYLKGLNKLNLLNLE 293
Query: 140 RCQLSDDGC-EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 198
C+ C + + + L LNL +D L NL+ LNL I + LV+
Sbjct: 294 GCRHVTAACLDTLTALAGLMYLNLNRCNFSDSGCEKFSDLINLKILNLGMNNITNSCLVH 353
Query: 199 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 258
L GL L+ L L ++G GL HLSG+ L+S+ LS T + LR L+GLS+L+S+NL
Sbjct: 354 LKGLTKLESLNLDSCRIGDEGLVHLSGMLELKSLELSDTEVGSNGLRHLSGLSNLESINL 413
Query: 259 DARQIXXXXXXXXXXXXXXXXXDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKH 318
+ +L +TD+G + L + L L++ G +TD+G H
Sbjct: 414 SFTVVTDSGLRKLSGLTSLRTLNLDARHVTDAGLSALTSLTGLTHLDLFGARITDSGTNH 473
Query: 319 IKDXXXXXXXXXXXXXXXTDKTLELISGLTGLVSLNVS-NSRITSAGLRHLKPLKNLRSL 377
+++ TD ++ I L+ L LN+S NS +T L + L L SL
Sbjct: 474 LRNLKKLQSLEICGGGL-TDTGVKNIKDLSSLTLLNLSQNSNLTDKTLELISGLTGLVSL 532
Query: 378 TLESCKVTANDIKRLQSRDLPNLVSFRPE 406
+ + +V+++ ++ L + L NL S E
Sbjct: 533 NVSNSRVSSSGLRHL--KPLKNLRSLTLE 559
Score = 267 (99.0 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 93/329 (28%), Positives = 147/329 (44%)
Query: 71 ITDSDMKPLSGL-TNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCP-VTAACLDSLS 128
+ D M +S T+L S+ S S +TDSG+ C ++ L LS
Sbjct: 125 VNDDWMDVISSQSTSLLSVDFSGSDITDSGLVSLKGCTNLESLNFNFCDQISNRGLVHLS 184
Query: 129 ALGSLFYLNLNR-CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 187
L +L L+ R ++ G S + +LK L+L D LVHL+ LT LESLN+
Sbjct: 185 GLSNLTSLSFRRNAAITAQGMRALSNLVNLKKLDLEKCPGIDGGLVHLRALTKLESLNIK 244
Query: 188 SCG-IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS-FTGISDGSLR 245
C I D + L+ L NL+ L++ +++ G+ +L GL L +NL ++ L
Sbjct: 245 WCNCITDADMEPLSVLTNLRSLQICCSKITDIGISYLKGLNKLNLLNLEGCRHVTAACLD 304
Query: 246 KLAGLSSLKSLNLDARQIXXXXXXXXXXXXXXXXXDLFGARITDSGAAYLRNFKNLRSLE 305
L L+ L LNL+ +L IT+S +L+ L SL
Sbjct: 305 TLTALAGLMYLNLNRCNFSDSGCEKFSDLINLKILNLGMNNITNSCLVHLKGLTKLESLN 364
Query: 306 ICGGGLTDAGVKHIKDXXXXXXXXXXXXXXXTDKTLELISGLTGLVSLNVSNSRITSAGL 365
+ + D G+ H+ ++ L +SGL+ L S+N+S + +T +GL
Sbjct: 365 LDSCRIGDEGLVHLSGMLELKSLELSDTEVGSNG-LRHLSGLSNLESINLSFTVVTDSGL 423
Query: 366 RHLKPLKNLRSLTLESCKVTANDIKRLQS 394
R L L +LR+L L++ VT + L S
Sbjct: 424 RKLSGLTSLRTLNLDARHVTDAGLSALTS 452
>TAIR|locus:2138131 [details] [associations]
symbol:AT4G23840 "AT4G23840" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND]
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AY099739 EMBL:AY128902
EMBL:AK176593 IPI:IPI00519129 RefSeq:NP_194115.3 UniGene:At.32402
ProteinModelPortal:Q8L4C7 SMR:Q8L4C7 EnsemblPlants:AT4G23840.1
GeneID:828483 KEGG:ath:AT4G23840 TAIR:At4g23840 eggNOG:NOG280336
HOGENOM:HOG000078805 InParanoid:Q8L4C7 OMA:ISERREW PhylomeDB:Q8L4C7
ProtClustDB:CLSN2680981 Genevestigator:Q8L4C7 Uniprot:Q8L4C7
Length = 597
Score = 240 (89.5 bits), Expect = 5.3e-18, P = 5.3e-18
Identities = 77/245 (31%), Positives = 120/245 (48%)
Query: 17 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGG-LVNLKGLMKLESLNIKWCNCITDSD 75
R +++ A+ M G +NL+ L+L C RI+ L + GL L L++ C +TD+
Sbjct: 69 RGKSSVNAEWMAYIGGFVNLITLNLSDCQRINSSTLWPITGLTSLTELDLSRCFKVTDAG 128
Query: 76 MKPLSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFY 135
MK L + NLK L IS + VT+ GI+ G PVT L SL AL L Y
Sbjct: 129 MKHLQSVVNLKKLWISQTGVTEVGISLLASLKKLSLLDLGGLPVTDQNLISLQALTKLEY 188
Query: 136 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 195
L++ +++ G K +L LNL + IT + +LE L++++C I E
Sbjct: 189 LDIWGSNVTNQGAVSILKFSNLSFLNLSWTSITQT-----PNIPHLECLHMNTCTIVSEP 243
Query: 196 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 255
+ + L +LK L LS S+ LS TN I ++ +S SL+ + L ++ +
Sbjct: 244 KTH-SSLASLKKLVLSGANF-SAETESLS-FTNKSCI--TYLDVSKTSLKNFSFLETMFN 298
Query: 256 L-NLD 259
L +LD
Sbjct: 299 LEHLD 303
Score = 215 (80.7 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 106/402 (26%), Positives = 168/402 (41%)
Query: 22 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 81
+T GMK ++NL KL + + G+ L L KL L++ +TD ++ L
Sbjct: 124 VTDAGMKHLQSVVNLKKLWISQTGVTEVGISLLASLKKLSLLDLGGLP-VTDQNLISLQA 182
Query: 82 LTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLNLNRC 141
LT L+ L I S VT+ G +T + L L++N C
Sbjct: 183 LTKLEYLDIWGSNVTNQGAVSILKFSNLSFLNLSWTSITQT-----PNIPHLECLHMNTC 237
Query: 142 QLSDDGCEKFSKIGSLKVLNLG---FNEITDE-------CLVHL-------KGLT----- 179
+ + + S + SLK L L F+ T+ C+ +L K +
Sbjct: 238 TIVSEP-KTHSSLASLKKLVLSGANFSAETESLSFTNKSCITYLDVSKTSLKNFSFLETM 296
Query: 180 -NLESLNLDSCGIGDE--GLVNLTGLCNLKCLELSDTQVGSSGLRHLSG-LTNLESINLS 235
NLE L+L S GD+ G V G NLK L +SDTQ+ SG+ +L+G + LE++++S
Sbjct: 297 FNLEHLDLSSTAFGDDSVGFVACVGE-NLKNLNVSDTQITPSGVGNLAGHVPQLETLSMS 355
Query: 236 FTGISDGSLRKLAG-LSSLKSLNLDARQIXXXXXXXXXXXXXXXXXDLFGARITDSGAAY 294
T + D S+ ++ + +K+L+L + A
Sbjct: 356 QTFVDDLSILLISTTMPCIKALDLGMNSTLGFYYLISPQEEK------------EKSLAA 403
Query: 295 LRNFKNLRSLEICGGGLTDAGVKHIKDXXXXXXXXXXXXXXXTDKTLELISGLTGLVSLN 354
L++ +L +L + L D + + TD TL +S L LVSL
Sbjct: 404 LQSLTSLETLSLEHPYLGDKALSGLSSLTGLTHLSLTSTSL-TDSTLHHLSSLPNLVSLG 462
Query: 355 VSNSRITSAGLRHLKPLKNLRSLTLESC-KVTANDIKRLQSR 395
V + +TS GL +P LR+L L+ C +T +DI L R
Sbjct: 463 VRDGVLTSNGLEKFRPPNRLRTLDLQGCWLLTKDDIAGLCKR 504
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 46/169 (27%), Positives = 84/169 (49%)
Query: 156 SLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSDT 213
S++ ++L G + + E + ++ G NL +LNL C I L +TGL +L L+LS
Sbjct: 62 SVENIDLRGKSSVNAEWMAYIGGFVNLITLNLSDCQRINSSTLWPITGLTSLTELDLSRC 121
Query: 214 -QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIXXXXXXXXX 272
+V +G++HL + NL+ + +S TG+++ + LA L L L+L +
Sbjct: 122 FKVTDAGMKHLQSVVNLKKLWISQTGVTEVGISLLASLKKLSLLDLGGLPVTDQNLISLQ 181
Query: 273 XXXXXXXXDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA-GVKHIK 320
D++G+ +T+ GA + F NL L + +T + H++
Sbjct: 182 ALTKLEYLDIWGSNVTNQGAVSILKFSNLSFLNLSWTSITQTPNIPHLE 230
>UNIPROTKB|F1NMM1 [details] [associations]
symbol:FBXL14 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IEA] GO:GO:0005737 GO:GO:0004842
GeneTree:ENSGT00700000104023 GO:GO:0042787 EMBL:AADN02006493
IPI:IPI00578519 Ensembl:ENSGALT00000021218 OMA:WEMTESE
ArrayExpress:F1NMM1 Uniprot:F1NMM1
Length = 345
Score = 208 (78.3 bits), Expect = 8.6e-15, P = 8.6e-15
Identities = 89/327 (27%), Positives = 145/327 (44%)
Query: 79 LSGLTNLKSLQIS-CSKVTDSGI--AYXXXXXXXXXXXXEGCP-VTAACLDSLSA-LGSL 133
+ G+ +++SL +S C +TD+G+ A+ C +T + L ++ L L
Sbjct: 19 IQGMADIESLNLSGCYNLTDNGLGHAFVAEISSLRSLNLSLCKQITDSSLGRIAQYLKGL 78
Query: 134 FYLNLNRCQ-LSDDGCEKFS-KIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCG 190
L L C +++ G + + LK LNL ++D + HL G+T +
Sbjct: 79 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAA------- 131
Query: 191 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS-GLTNLESINLSFTG-ISDGSLRKLA 248
EG + L L C +LSD + +HL+ GL L +NLSF G ISD L L+
Sbjct: 132 ---EGCLGLEQLTLQDCQKLSDLSI-----KHLARGLGRLRQLNLSFCGGISDAGLLHLS 183
Query: 249 GLSSLKSLNLDARQIXXXXXXXXXXXXXXXXXDL---FGARITDSGAAYL-RNFKNLRSL 304
+SSL+SLNL + L F ++ D AY+ + LRSL
Sbjct: 184 HMSSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLRSL 243
Query: 305 EICGGGLTDAGVKH-IKDXXXXXXXXXXXXXXXTDKTLELISG-LTGLVSLNVSN-SRIT 361
+C ++D G+ ++ TDK LELI+ L+ L +++ +RIT
Sbjct: 244 SLCSCHISDEGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRIT 303
Query: 362 SAGLRHLKPLKNLRSLTLESCKVTAND 388
GL + L L+ L L ++T ++
Sbjct: 304 KRGLERITQLPCLKVLNLGLWEMTESE 330
Score = 160 (61.4 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 57/192 (29%), Positives = 97/192 (50%)
Query: 29 AFAGLINLVKLDLERCTRIHG-GLVNL-KGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 86
A G + L +L L+ C ++ + +L +GL +L LN+ +C I+D+ + LS +++L+
Sbjct: 130 AAEGCLGLEQLTLQDCQKLSDLSIKHLARGLGRLRQLNLSFCGGISDAGLLHLSHMSSLR 189
Query: 87 SLQI-SCSKVTDSGIAYXXXXXXXXXXXXEG-CP-VTAACLDSLS-ALGSLFYLNLNRCQ 142
SL + SC ++D+GI + C V L ++ L L L+L C
Sbjct: 190 SLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLRSLSLCSCH 249
Query: 143 LSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVHL-KGLTNLESLNLDSCG-IGDEGLVN 198
+SD+G + + + L+ LN+G ITD+ L + + L+ L ++L C I GL
Sbjct: 250 ISDEGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLER 309
Query: 199 LTGLCNLKCLEL 210
+T L LK L L
Sbjct: 310 ITQLPCLKVLNL 321
Score = 160 (61.4 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 90/329 (27%), Positives = 141/329 (42%)
Query: 54 LKGLMKLESLNIKWCNCITDSDMKP--LSGLTNLKSLQIS-CSKVTDSGIA-YXXXXXXX 109
++G+ +ESLN+ C +TD+ + ++ +++L+SL +S C ++TDS +
Sbjct: 19 IQGMADIESLNLSGCYNLTDNGLGHAFVAEISSLRSLNLSLCKQITDSSLGRIAQYLKGL 78
Query: 110 XXXXXEGCP-VTAACLDSLS-ALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGFNE 166
GC +T L ++ L L LNL C+ LSD G IG L +
Sbjct: 79 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVG------IGHLAGMT---RS 129
Query: 167 ITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLT-GLCNLKCLELSDTQ-VGSSGLRHL 223
+ CL LE L L C + D + +L GL L+ L LS + +GL HL
Sbjct: 130 AAEGCL-------GLEQLTLQDCQKLSDLSIKHLARGLGRLRQLNLSFCGGISDAGLLHL 182
Query: 224 SGLTNLESINL-SFTGISDGSLRKLAGLSSLKSLNLDAR---QIXXXXXXXXXXXXXXXX 279
S +++L S+NL S ISD + LA + SL+ LD ++
Sbjct: 183 SHMSSLRSLNLRSCDNISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLR 241
Query: 280 X-DLFGARITDSGA-AYLRNFKNLRSLEI--CGGGLTDAGVKHIKDXXXXXXXXXXXX-X 334
L I+D G +R LR+L I C +TD G++ I +
Sbjct: 242 SLSLCSCHISDEGINRMVRQMHGLRTLNIGQCVR-ITDKGLELIAEHLSQLTGIDLYGCT 300
Query: 335 XXTDKTLELISGLTGLVSLNVSNSRITSA 363
T + LE I+ L L LN+ +T +
Sbjct: 301 RITKRGLERITQLPCLKVLNLGLWEMTES 329
Score = 156 (60.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 58/182 (31%), Positives = 96/182 (52%)
Query: 33 LINLVKLDLERCTRI-HGGLVNLK-GLMKLESLNIKWCNCITDSDMKPLSGLTN------ 84
L L L+L C+ I + GL+ + GL +L+SLN++ C ++D + L+G+T
Sbjct: 75 LKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGC 134
Query: 85 --LKSLQIS-CSKVTDSGIAYXXXXXXXXXXXXEG-CP-VTAACLDSLSALGSLFYLNLN 139
L+ L + C K++D I + C ++ A L LS + SL LNL
Sbjct: 135 LGLEQLTLQDCQKLSDLSIKHLARGLGRLRQLNLSFCGGISDAGLLHLSHMSSLRSLNLR 194
Query: 140 RCQ-LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDE 194
C +SD G + +GSL++ L++ F +++ D+ L ++ +GL L SL+L SC I DE
Sbjct: 195 SCDNISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLRSLSLCSCHISDE 253
Query: 195 GL 196
G+
Sbjct: 254 GI 255
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 71/254 (27%), Positives = 115/254 (45%)
Query: 154 IGSLKVLNL-GFNEITDECLVH--LKGLTNLESLNLDSCG-IGDEGLVNLTG-LCNLKCL 208
+ ++ LNL G +TD L H + +++L SLNL C I D L + L L+ L
Sbjct: 22 MADIESLNLSGCYNLTDNGLGHAFVAEISSLRSLNLSLCKQITDSSLGRIAQYLKGLEVL 81
Query: 209 ELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSLRKLAGLS-SLKSLNLDARQIX 264
EL + + ++GL ++ GL L+S+NL S +SD + LAG++ S L Q+
Sbjct: 82 ELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLT 141
Query: 265 XXXXXXXXXXXXXXXXDLFGARITDSGAAYL-RNFKNLRSLEI--CGGGLTDAGVKHIKD 321
D +++D +L R LR L + CGG ++DAG+ H+
Sbjct: 142 LQ--------------DC--QKLSDLSIKHLARGLGRLRQLNLSFCGG-ISDAGLLHLSH 184
Query: 322 XXXXXXXXXXXXXXXTDK-TLELISGLTGLVSLNVSN-SRITSAGLRHL-KPLKNLRSLT 378
+D + L G L L+VS ++ L ++ + L LRSL+
Sbjct: 185 MSSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLRSLS 244
Query: 379 LESCKVTANDIKRL 392
L SC ++ I R+
Sbjct: 245 LCSCHISDEGINRM 258
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 41/155 (26%), Positives = 79/155 (50%)
Query: 22 ITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLK-GLMKLESLNIKWCNCITDSDMKPL 79
I+ G+ + + +L L+L C I G+++L G ++L L++ +C+ + D + +
Sbjct: 174 ISDAGLLHLSHMSSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYI 233
Query: 80 S-GLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEG-CP-VTAACLDSLSA-LGSLFY 135
+ GL L+SL + ++D GI G C +T L+ ++ L L
Sbjct: 234 AQGLDGLRSLSLCSCHISDEGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTG 293
Query: 136 LNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNEITD 169
++L C +++ G E+ +++ LKVLNLG E+T+
Sbjct: 294 IDLYGCTRITKRGLERITQLPCLKVLNLGLWEMTE 328
>UNIPROTKB|Q17R01 [details] [associations]
symbol:FBXL14 "F-box/LRR-repeat protein 14" species:9913
"Bos taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR001810 PROSITE:PS50181
SMART:SM00256 GO:GO:0005737 SUPFAM:SSF81383 GO:GO:0004842
GeneTree:ENSGT00700000104023 GO:GO:0042787 InterPro:IPR013101
Pfam:PF07723 EMBL:BC118093 IPI:IPI00703039 RefSeq:NP_001069415.1
UniGene:Bt.12202 ProteinModelPortal:Q17R01 SMR:Q17R01 PRIDE:Q17R01
Ensembl:ENSBTAT00000010237 GeneID:531211 KEGG:bta:531211 CTD:144699
eggNOG:NOG69615 HOGENOM:HOG000007617 HOVERGEN:HBG051674
InParanoid:Q17R01 KO:K10280 OMA:LAMIFSY OrthoDB:EOG42FSHM
NextBio:20875415 Uniprot:Q17R01
Length = 400
Score = 206 (77.6 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 89/327 (27%), Positives = 145/327 (44%)
Query: 79 LSGLTNLKSLQIS-CSKVTDSGI--AYXXXXXXXXXXXXEGCP-VTAACLDSLSA-LGSL 133
+ G+ N++SL +S C +TD+G+ A+ C +T + L ++ L L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 FYLNLNRCQ-LSDDGCEKFS-KIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCG 190
L L C +++ G + + LK LNL ++D + HL G+T +
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAA------- 198
Query: 191 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS-GLTNLESINLSFTG-ISDGSLRKLA 248
EG + L L C +L+D L+H+S GLT L +NLSF G ISD L L+
Sbjct: 199 ---EGCLGLEQLTLQDCQKLTDLS-----LKHISRGLTGLRLLNLSFCGGISDAGLLHLS 250
Query: 249 GLSSLKSLNLDARQIXXXXXXXXXXXXXXXXXDL---FGARITDSGAAYL-RNFKNLRSL 304
+ SL+SLNL + L F ++ D AY+ + L+SL
Sbjct: 251 HMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSL 310
Query: 305 EICGGGLTDAGVKH-IKDXXXXXXXXXXXXXXXTDKTLELISG-LTGLVSLNVSN-SRIT 361
+C ++D G+ ++ TDK LELI+ L+ L +++ +RIT
Sbjct: 311 SLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRIT 370
Query: 362 SAGLRHLKPLKNLRSLTLESCKVTAND 388
GL + L L+ L L ++T ++
Sbjct: 371 KRGLERITQLPCLKVLNLGLWQMTDSE 397
Score = 163 (62.4 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 58/182 (31%), Positives = 98/182 (53%)
Query: 33 LINLVKLDLERCTRI-HGGLVNLK-GLMKLESLNIKWCNCITDSDMKPLSGLTN------ 84
L L L+L C+ I + GL+ + GL +L+SLN++ C ++D + L+G+T
Sbjct: 142 LKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGC 201
Query: 85 --LKSLQIS-CSKVTDSGIAYXXXXXXXXXXXXEG-CP-VTAACLDSLSALGSLFYLNLN 139
L+ L + C K+TD + + C ++ A L LS +GSL LNL
Sbjct: 202 LGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLR 261
Query: 140 RCQ-LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDE 194
C +SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+
Sbjct: 262 SCDNISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDD 320
Query: 195 GL 196
G+
Sbjct: 321 GI 322
Score = 158 (60.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 60/200 (30%), Positives = 98/200 (49%)
Query: 29 AFAGLINLVKLDLERCTRIHG-GLVNL-KGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 86
A G + L +L L+ C ++ L ++ +GL L LN+ +C I+D+ + LS + +L+
Sbjct: 197 AAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLR 256
Query: 87 SLQI-SCSKVTDSGIAYXXXXXXXXXXXXEG-CP-VTAACLDSLS-ALGSLFYLNLNRCQ 142
SL + SC ++D+GI + C V L ++ L L L+L C
Sbjct: 257 SLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCH 316
Query: 143 LSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVHL-KGLTNLESLNLDSCG-IGDEGLVN 198
+SDDG + + + L+ LN+G ITD+ L + + L+ L ++L C I GL
Sbjct: 317 ISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLER 376
Query: 199 LTGLCNLKCLELSDTQVGSS 218
+T L LK L L Q+ S
Sbjct: 377 ITQLPCLKVLNLGLWQMTDS 396
Score = 155 (59.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 89/329 (27%), Positives = 140/329 (42%)
Query: 54 LKGLMKLESLNIKWCNCITDSDMKP--LSGLTNLKSLQIS-CSKVTDSGIA-YXXXXXXX 109
++G+ +ESLN+ C +TD+ + + + +L++L +S C ++TDS +
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 110 XXXXXEGCP-VTAACLDSLS-ALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGFNE 166
GC +T L ++ L L LNL C+ LSD G IG L +
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVG------IGHLAGMT---RS 196
Query: 167 ITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLT-GLCNLKCLELSDTQ-VGSSGLRHL 223
+ CL LE L L C + D L +++ GL L+ L LS + +GL HL
Sbjct: 197 AAEGCL-------GLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHL 249
Query: 224 SGLTNLESINL-SFTGISDGSLRKLAGLSSLKSLNLDAR---QIXXXXXXXXXXXXXXXX 279
S + +L S+NL S ISD + LA + SL+ LD ++
Sbjct: 250 SHMGSLRSLNLRSCDNISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLK 308
Query: 280 X-DLFGARITDSGA-AYLRNFKNLRSLEI--CGGGLTDAGVKHIKDXXXXXXXXXXXX-X 334
L I+D G +R LR+L I C +TD G++ I +
Sbjct: 309 SLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVR-ITDKGLELIAEHLSQLTGIDLYGCT 367
Query: 335 XXTDKTLELISGLTGLVSLNVSNSRITSA 363
T + LE I+ L L LN+ ++T +
Sbjct: 368 RITKRGLERITQLPCLKVLNLGLWQMTDS 396
Score = 127 (49.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 70/251 (27%), Positives = 115/251 (45%)
Query: 154 IGSLKVLNL-GFNEITDECLVH--LKGLTNLESLNLDSCG-IGDEGLVNLTG-LCNLKCL 208
+ +++ LNL G +TD L H ++ + +L +LNL C I D L + L L+ L
Sbjct: 89 MANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGLEVL 148
Query: 209 ELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSLRKLAGLS-SLKSLNLDARQIX 264
EL + + ++GL ++ GL L+S+NL S +SD + LAG++ S L Q+
Sbjct: 149 ELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLT 208
Query: 265 XXXXXXXXXXXXXXXXDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDXXX 324
DL I+ G LR L +L CGG ++DAG+ H+
Sbjct: 209 LQDCQKLT--------DLSLKHIS-RGLTGLR----LLNLSFCGG-ISDAGLLHLSHMGS 254
Query: 325 XXXXXXXXXXXXTDK-TLELISGLTGLVSLNVSN-SRITSAGLRHL-KPLKNLRSLTLES 381
+D + L G L L+VS ++ L ++ + L L+SL+L S
Sbjct: 255 LRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCS 314
Query: 382 CKVTANDIKRL 392
C ++ + I R+
Sbjct: 315 CHISDDGINRM 325
>MGI|MGI:2141676 [details] [associations]
symbol:Fbxl14 "F-box and leucine-rich repeat protein 14"
species:10090 "Mus musculus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=ISO] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 MGI:MGI:2141676 GO:GO:0005737
SUPFAM:SSF81383 GO:GO:0004842 GeneTree:ENSGT00700000104023
GO:GO:0042787 InterPro:IPR013101 Pfam:PF07723 CTD:144699
eggNOG:NOG69615 HOGENOM:HOG000007617 HOVERGEN:HBG051674 KO:K10280
OMA:LAMIFSY OrthoDB:EOG42FSHM EMBL:AK084506 EMBL:AK155154
EMBL:BC006913 EMBL:BC021329 EMBL:AF467463 IPI:IPI00377604
RefSeq:NP_598701.2 UniGene:Mm.125477 ProteinModelPortal:Q8BID8
SMR:Q8BID8 STRING:Q8BID8 PhosphoSite:Q8BID8 PRIDE:Q8BID8
Ensembl:ENSMUST00000032094 GeneID:101358 KEGG:mmu:101358
UCSC:uc009dmj.2 InParanoid:Q8BID8 NextBio:354884 Bgee:Q8BID8
CleanEx:MM_FBXL14 Genevestigator:Q8BID8
GermOnline:ENSMUSG00000030019 Uniprot:Q8BID8
Length = 400
Score = 206 (77.6 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 89/327 (27%), Positives = 145/327 (44%)
Query: 79 LSGLTNLKSLQIS-CSKVTDSGI--AYXXXXXXXXXXXXEGCP-VTAACLDSLSA-LGSL 133
+ G+ N++SL +S C +TD+G+ A+ C +T + L ++ L L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 FYLNLNRCQ-LSDDGCEKFS-KIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCG 190
L L C +++ G + + LK LNL ++D + HL G+T +
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAA------- 198
Query: 191 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS-GLTNLESINLSFTG-ISDGSLRKLA 248
EG + L L C +L+D L+H+S GLT L +NLSF G ISD L L+
Sbjct: 199 ---EGCLGLEQLTLQDCQKLTDLS-----LKHISRGLTGLRLLNLSFCGGISDAGLLHLS 250
Query: 249 GLSSLKSLNLDARQIXXXXXXXXXXXXXXXXXDL---FGARITDSGAAYL-RNFKNLRSL 304
+ SL+SLNL + L F ++ D AY+ + L+SL
Sbjct: 251 HMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSL 310
Query: 305 EICGGGLTDAGVKH-IKDXXXXXXXXXXXXXXXTDKTLELISG-LTGLVSLNVSN-SRIT 361
+C ++D G+ ++ TDK LELI+ L+ L +++ +RIT
Sbjct: 311 SLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRIT 370
Query: 362 SAGLRHLKPLKNLRSLTLESCKVTAND 388
GL + L L+ L L ++T ++
Sbjct: 371 KRGLERITQLPCLKVLNLGLWQMTDSE 397
Score = 163 (62.4 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 58/182 (31%), Positives = 98/182 (53%)
Query: 33 LINLVKLDLERCTRI-HGGLVNLK-GLMKLESLNIKWCNCITDSDMKPLSGLTN------ 84
L L L+L C+ I + GL+ + GL +L+SLN++ C ++D + L+G+T
Sbjct: 142 LKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGC 201
Query: 85 --LKSLQIS-CSKVTDSGIAYXXXXXXXXXXXXEG-CP-VTAACLDSLSALGSLFYLNLN 139
L+ L + C K+TD + + C ++ A L LS +GSL LNL
Sbjct: 202 LGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLR 261
Query: 140 RCQ-LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDE 194
C +SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+
Sbjct: 262 SCDNISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDD 320
Query: 195 GL 196
G+
Sbjct: 321 GI 322
Score = 158 (60.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 60/200 (30%), Positives = 98/200 (49%)
Query: 29 AFAGLINLVKLDLERCTRIHG-GLVNL-KGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 86
A G + L +L L+ C ++ L ++ +GL L LN+ +C I+D+ + LS + +L+
Sbjct: 197 AAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLR 256
Query: 87 SLQI-SCSKVTDSGIAYXXXXXXXXXXXXEG-CP-VTAACLDSLS-ALGSLFYLNLNRCQ 142
SL + SC ++D+GI + C V L ++ L L L+L C
Sbjct: 257 SLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCH 316
Query: 143 LSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVHL-KGLTNLESLNLDSCG-IGDEGLVN 198
+SDDG + + + L+ LN+G ITD+ L + + L+ L ++L C I GL
Sbjct: 317 ISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLER 376
Query: 199 LTGLCNLKCLELSDTQVGSS 218
+T L LK L L Q+ S
Sbjct: 377 ITQLPCLKVLNLGLWQMTDS 396
Score = 155 (59.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 89/329 (27%), Positives = 140/329 (42%)
Query: 54 LKGLMKLESLNIKWCNCITDSDMKP--LSGLTNLKSLQIS-CSKVTDSGIA-YXXXXXXX 109
++G+ +ESLN+ C +TD+ + + + +L++L +S C ++TDS +
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 110 XXXXXEGCP-VTAACLDSLS-ALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGFNE 166
GC +T L ++ L L LNL C+ LSD G IG L +
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVG------IGHLAGMT---RS 196
Query: 167 ITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLT-GLCNLKCLELSDTQ-VGSSGLRHL 223
+ CL LE L L C + D L +++ GL L+ L LS + +GL HL
Sbjct: 197 AAEGCL-------GLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHL 249
Query: 224 SGLTNLESINL-SFTGISDGSLRKLAGLSSLKSLNLDAR---QIXXXXXXXXXXXXXXXX 279
S + +L S+NL S ISD + LA + SL+ LD ++
Sbjct: 250 SHMGSLRSLNLRSCDNISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLK 308
Query: 280 X-DLFGARITDSGA-AYLRNFKNLRSLEI--CGGGLTDAGVKHIKDXXXXXXXXXXXX-X 334
L I+D G +R LR+L I C +TD G++ I +
Sbjct: 309 SLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVR-ITDKGLELIAEHLSQLTGIDLYGCT 367
Query: 335 XXTDKTLELISGLTGLVSLNVSNSRITSA 363
T + LE I+ L L LN+ ++T +
Sbjct: 368 RITKRGLERITQLPCLKVLNLGLWQMTDS 396
Score = 127 (49.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 70/251 (27%), Positives = 115/251 (45%)
Query: 154 IGSLKVLNL-GFNEITDECLVH--LKGLTNLESLNLDSCG-IGDEGLVNLTG-LCNLKCL 208
+ +++ LNL G +TD L H ++ + +L +LNL C I D L + L L+ L
Sbjct: 89 MANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGLEVL 148
Query: 209 ELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSLRKLAGLS-SLKSLNLDARQIX 264
EL + + ++GL ++ GL L+S+NL S +SD + LAG++ S L Q+
Sbjct: 149 ELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLT 208
Query: 265 XXXXXXXXXXXXXXXXDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDXXX 324
DL I+ G LR L +L CGG ++DAG+ H+
Sbjct: 209 LQDCQKLT--------DLSLKHIS-RGLTGLR----LLNLSFCGG-ISDAGLLHLSHMGS 254
Query: 325 XXXXXXXXXXXXTDK-TLELISGLTGLVSLNVSN-SRITSAGLRHL-KPLKNLRSLTLES 381
+D + L G L L+VS ++ L ++ + L L+SL+L S
Sbjct: 255 LRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCS 314
Query: 382 CKVTANDIKRL 392
C ++ + I R+
Sbjct: 315 CHISDDGINRM 325
>RGD|1305523 [details] [associations]
symbol:Fbxl14 "F-box and leucine-rich repeat protein 14"
species:10116 "Rattus norvegicus" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR001810 SMART:SM00256 RGD:1305523 GO:GO:0005737
SUPFAM:SSF81383 GO:GO:0004842 GO:GO:0042787 EMBL:CH473964
InterPro:IPR013101 Pfam:PF07723 CTD:144699 KO:K10280 OMA:LAMIFSY
OrthoDB:EOG42FSHM IPI:IPI00365667 RefSeq:NP_001258205.1 SMR:D3ZE42
Ensembl:ENSRNOT00000000022 GeneID:312675 KEGG:rno:312675
UCSC:RGD:1305523 NextBio:665114 Uniprot:D3ZE42
Length = 400
Score = 206 (77.6 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 89/327 (27%), Positives = 145/327 (44%)
Query: 79 LSGLTNLKSLQIS-CSKVTDSGI--AYXXXXXXXXXXXXEGCP-VTAACLDSLSA-LGSL 133
+ G+ N++SL +S C +TD+G+ A+ C +T + L ++ L L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 FYLNLNRCQ-LSDDGCEKFS-KIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCG 190
L L C +++ G + + LK LNL ++D + HL G+T +
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAA------- 198
Query: 191 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS-GLTNLESINLSFTG-ISDGSLRKLA 248
EG + L L C +L+D L+H+S GLT L +NLSF G ISD L L+
Sbjct: 199 ---EGCLGLEQLTLQDCQKLTDLS-----LKHISRGLTGLRLLNLSFCGGISDAGLLHLS 250
Query: 249 GLSSLKSLNLDARQIXXXXXXXXXXXXXXXXXDL---FGARITDSGAAYL-RNFKNLRSL 304
+ SL+SLNL + L F ++ D AY+ + L+SL
Sbjct: 251 HMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSL 310
Query: 305 EICGGGLTDAGVKH-IKDXXXXXXXXXXXXXXXTDKTLELISG-LTGLVSLNVSN-SRIT 361
+C ++D G+ ++ TDK LELI+ L+ L +++ +RIT
Sbjct: 311 SLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRIT 370
Query: 362 SAGLRHLKPLKNLRSLTLESCKVTAND 388
GL + L L+ L L ++T ++
Sbjct: 371 KRGLERITQLPCLKVLNLGLWQMTDSE 397
Score = 163 (62.4 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 58/182 (31%), Positives = 98/182 (53%)
Query: 33 LINLVKLDLERCTRI-HGGLVNLK-GLMKLESLNIKWCNCITDSDMKPLSGLTN------ 84
L L L+L C+ I + GL+ + GL +L+SLN++ C ++D + L+G+T
Sbjct: 142 LKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGC 201
Query: 85 --LKSLQIS-CSKVTDSGIAYXXXXXXXXXXXXEG-CP-VTAACLDSLSALGSLFYLNLN 139
L+ L + C K+TD + + C ++ A L LS +GSL LNL
Sbjct: 202 LGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLR 261
Query: 140 RCQ-LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDE 194
C +SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+
Sbjct: 262 SCDNISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDD 320
Query: 195 GL 196
G+
Sbjct: 321 GI 322
Score = 158 (60.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 60/200 (30%), Positives = 98/200 (49%)
Query: 29 AFAGLINLVKLDLERCTRIHG-GLVNL-KGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 86
A G + L +L L+ C ++ L ++ +GL L LN+ +C I+D+ + LS + +L+
Sbjct: 197 AAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLR 256
Query: 87 SLQI-SCSKVTDSGIAYXXXXXXXXXXXXEG-CP-VTAACLDSLS-ALGSLFYLNLNRCQ 142
SL + SC ++D+GI + C V L ++ L L L+L C
Sbjct: 257 SLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCH 316
Query: 143 LSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVHL-KGLTNLESLNLDSCG-IGDEGLVN 198
+SDDG + + + L+ LN+G ITD+ L + + L+ L ++L C I GL
Sbjct: 317 ISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLER 376
Query: 199 LTGLCNLKCLELSDTQVGSS 218
+T L LK L L Q+ S
Sbjct: 377 ITQLPCLKVLNLGLWQMTDS 396
Score = 155 (59.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 89/329 (27%), Positives = 140/329 (42%)
Query: 54 LKGLMKLESLNIKWCNCITDSDMKP--LSGLTNLKSLQIS-CSKVTDSGIA-YXXXXXXX 109
++G+ +ESLN+ C +TD+ + + + +L++L +S C ++TDS +
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 110 XXXXXEGCP-VTAACLDSLS-ALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGFNE 166
GC +T L ++ L L LNL C+ LSD G IG L +
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVG------IGHLAGMT---RS 196
Query: 167 ITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLT-GLCNLKCLELSDTQ-VGSSGLRHL 223
+ CL LE L L C + D L +++ GL L+ L LS + +GL HL
Sbjct: 197 AAEGCL-------GLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHL 249
Query: 224 SGLTNLESINL-SFTGISDGSLRKLAGLSSLKSLNLDAR---QIXXXXXXXXXXXXXXXX 279
S + +L S+NL S ISD + LA + SL+ LD ++
Sbjct: 250 SHMGSLRSLNLRSCDNISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLK 308
Query: 280 X-DLFGARITDSGA-AYLRNFKNLRSLEI--CGGGLTDAGVKHIKDXXXXXXXXXXXX-X 334
L I+D G +R LR+L I C +TD G++ I +
Sbjct: 309 SLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVR-ITDKGLELIAEHLSQLTGIDLYGCT 367
Query: 335 XXTDKTLELISGLTGLVSLNVSNSRITSA 363
T + LE I+ L L LN+ ++T +
Sbjct: 368 RITKRGLERITQLPCLKVLNLGLWQMTDS 396
Score = 127 (49.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 70/251 (27%), Positives = 115/251 (45%)
Query: 154 IGSLKVLNL-GFNEITDECLVH--LKGLTNLESLNLDSCG-IGDEGLVNLTG-LCNLKCL 208
+ +++ LNL G +TD L H ++ + +L +LNL C I D L + L L+ L
Sbjct: 89 MANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGLEVL 148
Query: 209 ELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSLRKLAGLS-SLKSLNLDARQIX 264
EL + + ++GL ++ GL L+S+NL S +SD + LAG++ S L Q+
Sbjct: 149 ELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLT 208
Query: 265 XXXXXXXXXXXXXXXXDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDXXX 324
DL I+ G LR L +L CGG ++DAG+ H+
Sbjct: 209 LQDCQKLT--------DLSLKHIS-RGLTGLR----LLNLSFCGG-ISDAGLLHLSHMGS 254
Query: 325 XXXXXXXXXXXXTDK-TLELISGLTGLVSLNVSN-SRITSAGLRHL-KPLKNLRSLTLES 381
+D + L G L L+VS ++ L ++ + L L+SL+L S
Sbjct: 255 LRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCS 314
Query: 382 CKVTANDIKRL 392
C ++ + I R+
Sbjct: 315 CHISDDGINRM 325
>UNIPROTKB|Q8N1E6 [details] [associations]
symbol:FBXL14 "F-box/LRR-repeat protein 14" species:9606
"Homo sapiens" [GO:0005515 "protein binding" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 GO:GO:0005737 SUPFAM:SSF81383
GO:GO:0004842 GO:GO:0042787 InterPro:IPR013101 Pfam:PF07723
CTD:144699 eggNOG:NOG69615 HOGENOM:HOG000007617 HOVERGEN:HBG051674
KO:K10280 OMA:LAMIFSY OrthoDB:EOG42FSHM EMBL:BC028132
IPI:IPI00166145 RefSeq:NP_689654.1 UniGene:Hs.367956
ProteinModelPortal:Q8N1E6 SMR:Q8N1E6 IntAct:Q8N1E6 STRING:Q8N1E6
PhosphoSite:Q8N1E6 DMDM:48428083 PRIDE:Q8N1E6 DNASU:144699
Ensembl:ENST00000339235 GeneID:144699 KEGG:hsa:144699
UCSC:uc001qjh.3 GeneCards:GC12M001675 HGNC:HGNC:28624 MIM:609081
neXtProt:NX_Q8N1E6 PharmGKB:PA134979350 InParanoid:Q8N1E6
PhylomeDB:Q8N1E6 GenomeRNAi:144699 NextBio:84981 Bgee:Q8N1E6
CleanEx:HS_FBXL14 Genevestigator:Q8N1E6 GermOnline:ENSG00000171823
Uniprot:Q8N1E6
Length = 418
Score = 206 (77.6 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 89/327 (27%), Positives = 145/327 (44%)
Query: 79 LSGLTNLKSLQIS-CSKVTDSGI--AYXXXXXXXXXXXXEGCP-VTAACLDSLSA-LGSL 133
+ G+ N++SL +S C +TD+G+ A+ C +T + L ++ L L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 FYLNLNRCQ-LSDDGCEKFS-KIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCG 190
L L C +++ G + + LK LNL ++D + HL G+T +
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAA------- 198
Query: 191 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS-GLTNLESINLSFTG-ISDGSLRKLA 248
EG + L L C +L+D L+H+S GLT L +NLSF G ISD L L+
Sbjct: 199 ---EGCLGLEQLTLQDCQKLTDLS-----LKHISRGLTGLRLLNLSFCGGISDAGLLHLS 250
Query: 249 GLSSLKSLNLDARQIXXXXXXXXXXXXXXXXXDL---FGARITDSGAAYL-RNFKNLRSL 304
+ SL+SLNL + L F ++ D AY+ + L+SL
Sbjct: 251 HMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSL 310
Query: 305 EICGGGLTDAGVKH-IKDXXXXXXXXXXXXXXXTDKTLELISG-LTGLVSLNVSN-SRIT 361
+C ++D G+ ++ TDK LELI+ L+ L +++ +RIT
Sbjct: 311 SLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRIT 370
Query: 362 SAGLRHLKPLKNLRSLTLESCKVTAND 388
GL + L L+ L L ++T ++
Sbjct: 371 KRGLERITQLPCLKVLNLGLWQMTDSE 397
Score = 163 (62.4 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 58/182 (31%), Positives = 98/182 (53%)
Query: 33 LINLVKLDLERCTRI-HGGLVNLK-GLMKLESLNIKWCNCITDSDMKPLSGLTN------ 84
L L L+L C+ I + GL+ + GL +L+SLN++ C ++D + L+G+T
Sbjct: 142 LKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGC 201
Query: 85 --LKSLQIS-CSKVTDSGIAYXXXXXXXXXXXXEG-CP-VTAACLDSLSALGSLFYLNLN 139
L+ L + C K+TD + + C ++ A L LS +GSL LNL
Sbjct: 202 LGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLR 261
Query: 140 RCQ-LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDE 194
C +SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+
Sbjct: 262 SCDNISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDD 320
Query: 195 GL 196
G+
Sbjct: 321 GI 322
Score = 158 (60.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 60/200 (30%), Positives = 98/200 (49%)
Query: 29 AFAGLINLVKLDLERCTRIHG-GLVNL-KGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 86
A G + L +L L+ C ++ L ++ +GL L LN+ +C I+D+ + LS + +L+
Sbjct: 197 AAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLR 256
Query: 87 SLQI-SCSKVTDSGIAYXXXXXXXXXXXXEG-CP-VTAACLDSLS-ALGSLFYLNLNRCQ 142
SL + SC ++D+GI + C V L ++ L L L+L C
Sbjct: 257 SLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCH 316
Query: 143 LSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVHL-KGLTNLESLNLDSCG-IGDEGLVN 198
+SDDG + + + L+ LN+G ITD+ L + + L+ L ++L C I GL
Sbjct: 317 ISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLER 376
Query: 199 LTGLCNLKCLELSDTQVGSS 218
+T L LK L L Q+ S
Sbjct: 377 ITQLPCLKVLNLGLWQMTDS 396
Score = 155 (59.6 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 89/329 (27%), Positives = 140/329 (42%)
Query: 54 LKGLMKLESLNIKWCNCITDSDMKP--LSGLTNLKSLQIS-CSKVTDSGIA-YXXXXXXX 109
++G+ +ESLN+ C +TD+ + + + +L++L +S C ++TDS +
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 110 XXXXXEGCP-VTAACLDSLS-ALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGFNE 166
GC +T L ++ L L LNL C+ LSD G IG L +
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVG------IGHLAGMT---RS 196
Query: 167 ITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLT-GLCNLKCLELSDTQ-VGSSGLRHL 223
+ CL LE L L C + D L +++ GL L+ L LS + +GL HL
Sbjct: 197 AAEGCL-------GLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHL 249
Query: 224 SGLTNLESINL-SFTGISDGSLRKLAGLSSLKSLNLDAR---QIXXXXXXXXXXXXXXXX 279
S + +L S+NL S ISD + LA + SL+ LD ++
Sbjct: 250 SHMGSLRSLNLRSCDNISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLK 308
Query: 280 X-DLFGARITDSGA-AYLRNFKNLRSLEI--CGGGLTDAGVKHIKDXXXXXXXXXXXX-X 334
L I+D G +R LR+L I C +TD G++ I +
Sbjct: 309 SLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVR-ITDKGLELIAEHLSQLTGIDLYGCT 367
Query: 335 XXTDKTLELISGLTGLVSLNVSNSRITSA 363
T + LE I+ L L LN+ ++T +
Sbjct: 368 RITKRGLERITQLPCLKVLNLGLWQMTDS 396
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 54/210 (25%), Positives = 101/210 (48%)
Query: 55 KGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYXXXXXXXXXX 112
+G + LE L ++ C +TD +K +S GLT L+ L +S C ++D+G+ +
Sbjct: 199 EGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSL 258
Query: 113 XXEGCP-VTAACLDSLSALGSLFY--LNLNRC-QLSDDGCEKFSK-IGSLKVLNLGFNEI 167
C ++ + L A+GSL L+++ C ++ D ++ + LK L+L I
Sbjct: 259 NLRSCDNISDTGIMHL-AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHI 317
Query: 168 TDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLTG-LCNLKCLELSD-TQVGSSGLRHL 223
+D+ + + + + L +LN+ C I D+GL + L L ++L T++ GL +
Sbjct: 318 SDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERI 377
Query: 224 SGLTNLESINLSFTGISDGSLRKLAGLSSL 253
+ L L+ +NL ++D S L
Sbjct: 378 TQLPCLKVLNLGLWQMTDSEKEARGDFSPL 407
Score = 127 (49.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 70/251 (27%), Positives = 115/251 (45%)
Query: 154 IGSLKVLNL-GFNEITDECLVH--LKGLTNLESLNLDSCG-IGDEGLVNLTG-LCNLKCL 208
+ +++ LNL G +TD L H ++ + +L +LNL C I D L + L L+ L
Sbjct: 89 MANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGLEVL 148
Query: 209 ELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSLRKLAGLS-SLKSLNLDARQIX 264
EL + + ++GL ++ GL L+S+NL S +SD + LAG++ S L Q+
Sbjct: 149 ELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLT 208
Query: 265 XXXXXXXXXXXXXXXXDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDXXX 324
DL I+ G LR L +L CGG ++DAG+ H+
Sbjct: 209 LQDCQKLT--------DLSLKHIS-RGLTGLR----LLNLSFCGG-ISDAGLLHLSHMGS 254
Query: 325 XXXXXXXXXXXXTDK-TLELISGLTGLVSLNVSN-SRITSAGLRHL-KPLKNLRSLTLES 381
+D + L G L L+VS ++ L ++ + L L+SL+L S
Sbjct: 255 LRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCS 314
Query: 382 CKVTANDIKRL 392
C ++ + I R+
Sbjct: 315 CHISDDGINRM 325
>ZFIN|ZDB-GENE-030131-3556 [details] [associations]
symbol:fbxl14b "F-box and leucine-rich repeat
protein 14b" species:7955 "Danio rerio" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IC] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=IC] InterPro:IPR001810 PROSITE:PS50181
SMART:SM00256 ZFIN:ZDB-GENE-030131-3556 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0019005 GeneTree:ENSGT00700000104023
eggNOG:NOG69615 HOGENOM:HOG000007617 HOVERGEN:HBG051674 KO:K10280
OMA:LAMIFSY OrthoDB:EOG42FSHM EMBL:BX649324 EMBL:BC163001
EMBL:BC163002 IPI:IPI00502723 RefSeq:NP_001015043.1
UniGene:Dr.79118 STRING:Q5RH13 Ensembl:ENSDART00000067322
GeneID:324835 KEGG:dre:324835 CTD:324835 InParanoid:Q5RH13
NextBio:20808984 Uniprot:Q5RH13
Length = 400
Score = 202 (76.2 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 89/327 (27%), Positives = 148/327 (45%)
Query: 79 LSGLTNLKSLQIS-CSKVTDSGI--AYXXXXXXXXXXXXEGCP-VTAACLDSLSA-LGSL 133
+ G+ N++SL +S C +TD+G+ A+ C +T + L ++ L +L
Sbjct: 86 IQGMPNIESLNLSGCYNLTDNGLGHAFVQEIPSLRVLNLSLCKQITDSSLGRIAQYLKNL 145
Query: 134 FYLNLNRCQ-LSDDGCEKFS-KIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCG 190
L L C +++ G + + LK LNL ++D + HL G+T +
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLHRLKSLNLRSCRHVSDVGIGHLAGMTRSAA------- 198
Query: 191 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS-GLTNLESINLSFTG-ISDGSLRKLA 248
EG ++L L C +L+D L+H+S GLT L+ +NLSF G ISD + L+
Sbjct: 199 ---EGCLSLEYLTLQDCQKLTDLS-----LKHISKGLTKLKVLNLSFCGGISDAGMIHLS 250
Query: 249 GLSSLKSLNLDARQIXXXXXXXXXXXXXXXXXDL---FGARITDSGAAYL-RNFKNLRSL 304
++SL SLNL + L F +I D AY+ + L+SL
Sbjct: 251 HMTSLWSLNLRSCDNISDTGIMHLAMGTLRLSGLDVSFCDKIGDQSLAYIAQGLYQLKSL 310
Query: 305 EICGGGLTDAGVKH-IKDXXXXXXXXXXXXXXXTDKTLELISG-LTGLVSLNVSN-SRIT 361
+C ++D G+ ++ TDK LELI+ LT L +++ ++IT
Sbjct: 311 SLCSCHISDDGINRMVRQMHELRTLNIGQCVRITDKGLELIADHLTQLTGIDLYGCTKIT 370
Query: 362 SAGLRHLKPLKNLRSLTLESCKVTAND 388
GL + L L+ L L ++T ++
Sbjct: 371 KRGLERITQLPCLKVLNLGLWQMTESE 397
Score = 171 (65.3 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 64/200 (32%), Positives = 99/200 (49%)
Query: 29 AFAGLINLVKLDLERCTRIHG-GLVNL-KGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 86
A G ++L L L+ C ++ L ++ KGL KL+ LN+ +C I+D+ M LS +T+L
Sbjct: 197 AAEGCLSLEYLTLQDCQKLTDLSLKHISKGLTKLKVLNLSFCGGISDAGMIHLSHMTSLW 256
Query: 87 SLQI-SCSKVTDSGIAYXXXXXXXXXXXXEG-CP-VTAACLDSLS-ALGSLFYLNLNRCQ 142
SL + SC ++D+GI + C + L ++ L L L+L C
Sbjct: 257 SLNLRSCDNISDTGIMHLAMGTLRLSGLDVSFCDKIGDQSLAYIAQGLYQLKSLSLCSCH 316
Query: 143 LSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVHLKG-LTNLESLNLDSCG-IGDEGLVN 198
+SDDG + + + L+ LN+G ITD+ L + LT L ++L C I GL
Sbjct: 317 ISDDGINRMVRQMHELRTLNIGQCVRITDKGLELIADHLTQLTGIDLYGCTKITKRGLER 376
Query: 199 LTGLCNLKCLELSDTQVGSS 218
+T L LK L L Q+ S
Sbjct: 377 ITQLPCLKVLNLGLWQMTES 396
Score = 159 (61.0 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 57/182 (31%), Positives = 100/182 (54%)
Query: 33 LINLVKLDLERCTRI-HGGLVNLK-GLMKLESLNIKWCNCITDSDMKPLSGLT------- 83
L NL L+L C+ I + GL+ + GL +L+SLN++ C ++D + L+G+T
Sbjct: 142 LKNLEVLELGGCSNITNTGLLLIAWGLHRLKSLNLRSCRHVSDVGIGHLAGMTRSAAEGC 201
Query: 84 -NLKSLQIS-CSKVTDSGIAYXXXXXXXXXXXXEG-CP-VTAACLDSLSALGSLFYLNLN 139
+L+ L + C K+TD + + C ++ A + LS + SL+ LNL
Sbjct: 202 LSLEYLTLQDCQKLTDLSLKHISKGLTKLKVLNLSFCGGISDAGMIHLSHMTSLWSLNLR 261
Query: 140 RCQ-LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDE 194
C +SD G + +G+L++ L++ F ++I D+ L ++ +GL L+SL+L SC I D+
Sbjct: 262 SCDNISDTGIMHLA-MGTLRLSGLDVSFCDKIGDQSLAYIAQGLYQLKSLSLCSCHISDD 320
Query: 195 GL 196
G+
Sbjct: 321 GI 322
Score = 154 (59.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 90/329 (27%), Positives = 141/329 (42%)
Query: 54 LKGLMKLESLNIKWCNCITDSDMKP--LSGLTNLKSLQIS-CSKVTDSGIA-YXXXXXXX 109
++G+ +ESLN+ C +TD+ + + + +L+ L +S C ++TDS +
Sbjct: 86 IQGMPNIESLNLSGCYNLTDNGLGHAFVQEIPSLRVLNLSLCKQITDSSLGRIAQYLKNL 145
Query: 110 XXXXXEGCP-VTAACLDSLS-ALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGFNE 166
GC +T L ++ L L LNL C+ +SD G IG L +
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLHRLKSLNLRSCRHVSDVG------IGHLAGMT---RS 196
Query: 167 ITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLT-GLCNLKCLELSDTQ-VGSSGLRHL 223
+ CL +LE L L C + D L +++ GL LK L LS + +G+ HL
Sbjct: 197 AAEGCL-------SLEYLTLQDCQKLTDLSLKHISKGLTKLKVLNLSFCGGISDAGMIHL 249
Query: 224 SGLTNLESINL-SFTGISDGSLRKLAGLSSLKSLNLDAR---QIXXXXXXXXXXXXXXXX 279
S +T+L S+NL S ISD + LA + +L+ LD +I
Sbjct: 250 SHMTSLWSLNLRSCDNISDTGIMHLA-MGTLRLSGLDVSFCDKIGDQSLAYIAQGLYQLK 308
Query: 280 X-DLFGARITDSGA-AYLRNFKNLRSLEI--CGGGLTDAGVKHIKDXXXXXXXXXXXX-X 334
L I+D G +R LR+L I C +TD G++ I D
Sbjct: 309 SLSLCSCHISDDGINRMVRQMHELRTLNIGQCVR-ITDKGLELIADHLTQLTGIDLYGCT 367
Query: 335 XXTDKTLELISGLTGLVSLNVSNSRITSA 363
T + LE I+ L L LN+ ++T +
Sbjct: 368 KITKRGLERITQLPCLKVLNLGLWQMTES 396
Score = 123 (48.4 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 72/258 (27%), Positives = 115/258 (44%)
Query: 156 SLKVLNL-GFNEITDECLVH--LKGLTNLESLNLDSCG-IGDEGLVNLTG-LCNLKCLEL 210
+++ LNL G +TD L H ++ + +L LNL C I D L + L NL+ LEL
Sbjct: 91 NIESLNLSGCYNLTDNGLGHAFVQEIPSLRVLNLSLCKQITDSSLGRIAQYLKNLEVLEL 150
Query: 211 SD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSLRKLAGLSSLKSLNLDARQIXXXX 267
+ + ++GL ++ GL L+S+NL S +SD + LAG++ A +
Sbjct: 151 GGCSNITNTGLLLIAWGLHRLKSLNLRSCRHVSDVGIGHLAGMTR------SAAE-GCLS 203
Query: 268 XXXXXXXXXXXXXDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDXXXXXX 327
DL I+ L K L +L CGG ++DAG+ H+
Sbjct: 204 LEYLTLQDCQKLTDLSLKHISKG----LTKLKVL-NLSFCGG-ISDAGMIHLSHMTSLWS 257
Query: 328 XXXXXXXXXTDK-TLELISGLTGLVSLNVSN-SRITSAGLRHL-KPLKNLRSLTLESCKV 384
+D + L G L L+VS +I L ++ + L L+SL+L SC +
Sbjct: 258 LNLRSCDNISDTGIMHLAMGTLRLSGLDVSFCDKIGDQSLAYIAQGLYQLKSLSLCSCHI 317
Query: 385 TANDIKRL--QSRDLPNL 400
+ + I R+ Q +L L
Sbjct: 318 SDDGINRMVRQMHELRTL 335
>ZFIN|ZDB-GENE-030131-5920 [details] [associations]
symbol:fbxl14a "F-box and leucine-rich repeat
protein 14a" species:7955 "Danio rerio" [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IPI] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IC] [GO:0016567 "protein ubiquitination"
evidence=IC] InterPro:IPR001810 SMART:SM00256
ZFIN:ZDB-GENE-030131-5920 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0019005 GeneTree:ENSGT00700000104023 eggNOG:NOG69615
HOGENOM:HOG000007617 HOVERGEN:HBG051674 OrthoDB:EOG42FSHM
EMBL:BX546452 EMBL:BC096775 EMBL:BC153539 EMBL:AY398381
IPI:IPI00498297 RefSeq:NP_958890.1 UniGene:Dr.142223
UniGene:Dr.76431 STRING:Q6TGX5 Ensembl:ENSDART00000050029
Ensembl:ENSDART00000109520 GeneID:333988 KEGG:dre:333988 CTD:333988
InParanoid:Q6TGX5 OMA:FISHRPH NextBio:20810218 Uniprot:Q6TGX5
Length = 411
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 95/372 (25%), Positives = 165/372 (44%)
Query: 38 KLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVT 96
KL L R + +G+ K++ L+++ S + G+ N++SL +S C +T
Sbjct: 51 KLHLRRANPSLFPSLQTRGIKKVQILSLR------RSLSYVIQGMPNIESLNLSGCYNLT 104
Query: 97 DSGI--AYXXXXXXXXXXXXEGCP-VTAACLDSLSA-LGSLFYLNLNRCQ-LSDDGCEKF 151
D+G+ A+ C +T + L ++ L +L L+L C +++ G
Sbjct: 105 DNGLGHAFVQDIPSLRILNLSLCKQITDSSLGRIAQYLKNLELLDLGGCSNITNTGLLLI 164
Query: 152 S-KIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE 209
+ + +LK LNL ++D + HL G+T + EG + L L C +
Sbjct: 165 AWGLHNLKSLNLRSCRHVSDVGIGHLAGMTRSAA----------EGCLTLEHLTLQDCQK 214
Query: 210 LSDTQVGSSGLRHLS-GLTNLESINLSFTG-ISDGSLRKLAGLSSLKSLNLDARQIXXXX 267
L+D L+H+S GL L+ +NLSF G ISD + L+ ++ L +LNL +
Sbjct: 215 LTDLS-----LKHISKGLNKLKVLNLSFCGGISDAGMIHLSHMTQLWTLNLRSCDNISDT 269
Query: 268 XXXXXXXXXXXXXDL---FGARITDSGAAYL-RNFKNLRSLEICGGGLTDAGVKH-IKDX 322
L F ++ D AY+ + L+SL +C ++D G+ ++
Sbjct: 270 GIMHLSMGALRLYGLDVSFCDKVGDQSLAYIAQGLYQLKSLSLCSCHISDDGINRMVRQM 329
Query: 323 XXXXXXXXXXXXXXTDKTLELISG-LTGLVSLNVSN-SRITSAGLRHLKPLKNLRSLTLE 380
TDK LELI+ LT L +++ ++IT GL + L L+ L L
Sbjct: 330 HELKTLNIGQCVRITDKGLELIADHLTQLTGIDLYGCTKITKRGLERITQLPCLKVLNLG 389
Query: 381 SCKVTANDIKRL 392
++T ++K L
Sbjct: 390 LWQMT--EVKGL 399
Score = 167 (63.8 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 63/192 (32%), Positives = 94/192 (48%)
Query: 29 AFAGLINLVKLDLERCTRIHG-GLVNL-KGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 86
A G + L L L+ C ++ L ++ KGL KL+ LN+ +C I+D+ M LS +T L
Sbjct: 197 AAEGCLTLEHLTLQDCQKLTDLSLKHISKGLNKLKVLNLSFCGGISDAGMIHLSHMTQLW 256
Query: 87 SLQI-SCSKVTDSGIAYXXXXXXXXXXXXEG-CP-VTAACLDSLS-ALGSLFYLNLNRCQ 142
+L + SC ++D+GI + C V L ++ L L L+L C
Sbjct: 257 TLNLRSCDNISDTGIMHLSMGALRLYGLDVSFCDKVGDQSLAYIAQGLYQLKSLSLCSCH 316
Query: 143 LSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVHLKG-LTNLESLNLDSCG-IGDEGLVN 198
+SDDG + + + LK LN+G ITD+ L + LT L ++L C I GL
Sbjct: 317 ISDDGINRMVRQMHELKTLNIGQCVRITDKGLELIADHLTQLTGIDLYGCTKITKRGLER 376
Query: 199 LTGLCNLKCLEL 210
+T L LK L L
Sbjct: 377 ITQLPCLKVLNL 388
Score = 159 (61.0 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 60/197 (30%), Positives = 103/197 (52%)
Query: 33 LINLVKLDLERCTRI-HGGLVNLK-GLMKLESLNIKWCNCITDSDMKPLSGLTN------ 84
L NL LDL C+ I + GL+ + GL L+SLN++ C ++D + L+G+T
Sbjct: 142 LKNLELLDLGGCSNITNTGLLLIAWGLHNLKSLNLRSCRHVSDVGIGHLAGMTRSAAEGC 201
Query: 85 --LKSLQIS-CSKVTDSGIAYXXXXXXXXXXXXEG-CP-VTAACLDSLSALGSLFYLNLN 139
L+ L + C K+TD + + C ++ A + LS + L+ LNL
Sbjct: 202 LTLEHLTLQDCQKLTDLSLKHISKGLNKLKVLNLSFCGGISDAGMIHLSHMTQLWTLNLR 261
Query: 140 RCQ-LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDE 194
C +SD G S +G+L++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+
Sbjct: 262 SCDNISDTGIMHLS-MGALRLYGLDVSFCDKVGDQSLAYIAQGLYQLKSLSLCSCHISDD 320
Query: 195 GLVNLTG-LCNLKCLEL 210
G+ + + LK L +
Sbjct: 321 GINRMVRQMHELKTLNI 337
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 71/258 (27%), Positives = 116/258 (44%)
Query: 156 SLKVLNL-GFNEITDECLVH--LKGLTNLESLNLDSCG-IGDEGLVNLTG-LCNLKCLEL 210
+++ LNL G +TD L H ++ + +L LNL C I D L + L NL+ L+L
Sbjct: 91 NIESLNLSGCYNLTDNGLGHAFVQDIPSLRILNLSLCKQITDSSLGRIAQYLKNLELLDL 150
Query: 211 SD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSLRKLAGLSSLKSLNLDARQIXXXX 267
+ + ++GL ++ GL NL+S+NL S +SD + LAG++ A +
Sbjct: 151 GGCSNITNTGLLLIAWGLHNLKSLNLRSCRHVSDVGIGHLAGMTR------SAAE-GCLT 203
Query: 268 XXXXXXXXXXXXXDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDXXXXXX 327
DL I+ L K L +L CGG ++DAG+ H+
Sbjct: 204 LEHLTLQDCQKLTDLSLKHISKG----LNKLKVL-NLSFCGG-ISDAGMIHLSHMTQLWT 257
Query: 328 XXXXXXXXXTDK-TLELISGLTGLVSLNVSN-SRITSAGLRHL-KPLKNLRSLTLESCKV 384
+D + L G L L+VS ++ L ++ + L L+SL+L SC +
Sbjct: 258 LNLRSCDNISDTGIMHLSMGALRLYGLDVSFCDKVGDQSLAYIAQGLYQLKSLSLCSCHI 317
Query: 385 TANDIKRL--QSRDLPNL 400
+ + I R+ Q +L L
Sbjct: 318 SDDGINRMVRQMHELKTL 335
Score = 123 (48.4 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 42/155 (27%), Positives = 78/155 (50%)
Query: 22 ITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLK-GLMKLESLNIKWCNCITDSDMKPL 79
I+ GM + + L L+L C I G+++L G ++L L++ +C+ + D + +
Sbjct: 241 ISDAGMIHLSHMTQLWTLNLRSCDNISDTGIMHLSMGALRLYGLDVSFCDKVGDQSLAYI 300
Query: 80 S-GLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEG-CP-VTAACLDSLSA-LGSLFY 135
+ GL LKSL + ++D GI G C +T L+ ++ L L
Sbjct: 301 AQGLYQLKSLSLCSCHISDDGINRMVRQMHELKTLNIGQCVRITDKGLELIADHLTQLTG 360
Query: 136 LNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNEITD 169
++L C +++ G E+ +++ LKVLNLG ++T+
Sbjct: 361 IDLYGCTKITKRGLERITQLPCLKVLNLGLWQMTE 395
>FB|FBgn0020257 [details] [associations]
symbol:ppa "partner of paired" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=NAS] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:AE013599 SUPFAM:SSF81383 GO:GO:0019005
GeneTree:ENSGT00700000104023 eggNOG:NOG69615 KO:K10280 OMA:LAMIFSY
EMBL:AF187980 EMBL:AY119098 RefSeq:NP_523812.1 UniGene:Dm.2705
SMR:Q9W214 IntAct:Q9W214 MINT:MINT-1600614 STRING:Q9W214
EnsemblMetazoa:FBtr0071924 GeneID:37602 KEGG:dme:Dmel_CG9952
UCSC:CG9952-RA CTD:37602 FlyBase:FBgn0020257 InParanoid:Q9W214
OrthoDB:EOG4KH19K ChiTaRS:ppa GenomeRNAi:37602 NextBio:804504
Uniprot:Q9W214
Length = 538
Score = 186 (70.5 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 58/189 (30%), Positives = 100/189 (52%)
Query: 32 GLINLVKLDLERCTRIHGGLVN--LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 89
G + L L L+ C R+ + +GL L+S+N+ +C +TDS +K L+ + L+ L
Sbjct: 344 GNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLN 403
Query: 90 I-SCSKVTDSGIAYXXXXXXXXXXXXEG-CP-VTAACLDSLS-ALGSLFYLNLNRCQLSD 145
+ SC ++D G+AY C ++ L ++ L L L+LN+CQ++D
Sbjct: 404 LRSCDNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITD 463
Query: 146 DGCEKFSK-IGSLKVLNLG-FNEITDECLVHL-KGLTNLESLNLDSCG-IGDEGLVNLTG 201
G K +K + L+ LN+G + ITD+ L L + LTNL++++L C + +G+ +
Sbjct: 464 HGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMK 523
Query: 202 LCNLKCLEL 210
L L+ L L
Sbjct: 524 LPKLQKLNL 532
Score = 177 (67.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 58/190 (30%), Positives = 102/190 (53%)
Query: 55 KGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYXXXXXXXXXX 112
+G ++LE L ++ C ++D + ++ GLT+LKS+ +S C VTDSG+ +
Sbjct: 343 EGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQL 402
Query: 113 XXEGCP-VTAACLDSLSALGS-LFYLNLNRC-QLSDDGCEKFSK-IGSLKVLNLGFNEIT 168
C ++ + L+ GS + L+++ C ++SD ++ + L+ L+L +IT
Sbjct: 403 NLRSCDNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQIT 462
Query: 169 DECLVHL-KGLTNLESLNLDSCG-IGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRHLS 224
D ++ + K L LE+LN+ C I D+GL L L NLK ++L TQ+ S G+ +
Sbjct: 463 DHGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIM 522
Query: 225 GLTNLESINL 234
L L+ +NL
Sbjct: 523 KLPKLQKLNL 532
Score = 164 (62.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 78/295 (26%), Positives = 137/295 (46%)
Query: 32 GLINLVKLDLERCTRIHG---GLVNLKGLMKLESLNIKWCNCITDSDMKPLSG-LTNLKS 87
G+ L L+L C + G L L++L++ C ITD+ + ++ L NL++
Sbjct: 232 GVPALTSLNLSGCFNVADMNLGHAFSVDLPNLKTLDLSLCKQITDTSLGRIAQHLRNLET 291
Query: 88 LQIS-CSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLD-SLSALGSLFYLNLNRCQLSD 145
L++ C +T++G+ +C S +G L
Sbjct: 292 LELGGCCNITNTGLLLIAWGLKKLKHLN-----LRSCWHISDQGIGHLA----------- 335
Query: 146 DGCEKFSKIGSLKVLNLGFNE---ITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLT 200
G + + G+L++ LG + ++DE L H+ +GLT+L+S+NL C + D GL +L
Sbjct: 336 -GFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLA 394
Query: 201 GLCNLKCLEL-SDTQVGSSGLRHLS-GLTNLESINLSFTG-ISDGSLRKLA-GLSSLKSL 256
+ L+ L L S + G+ +L+ G + + S+++SF ISD +L +A GL L+SL
Sbjct: 395 RMPKLEQLNLRSCDNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSL 454
Query: 257 NLDARQIXXXXXXXXXXXXXXXXXDLFG--ARITDSGAAYL-RNFKNLRSLEICG 308
+L+ QI G +RITD G L + NL+++++ G
Sbjct: 455 SLNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYG 509
Score = 137 (53.3 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 67/262 (25%), Positives = 116/262 (44%)
Query: 156 SLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQV 215
SLK L LG +T ++L G N+ +NL D L NL L C +++DT +
Sbjct: 225 SLKDLVLGVPALTS---LNLSGCFNVADMNLGHAFSVD--LPNLKTLDLSLCKQITDTSL 279
Query: 216 GSSGLRHLSGLTNLE---SINLSFTGIS--DGSLRKLAGLSSLKSLNLDARQIXXXXXXX 270
G +HL L LE N++ TG+ L+KL L+ ++ + I
Sbjct: 280 GRIA-QHLRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWHISDQGIGHLAGFS 338
Query: 271 XXXXXXXXXXDLFGA----RITDSGAAYL-RNFKNLRSLEI--CGGGLTDAGVKHIKDXX 323
+ G R++D ++ + +L+S+ + C +TD+G+KH+
Sbjct: 339 RETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVS-VTDSGLKHLARMP 397
Query: 324 XXXXXXXXXXXXXTDKTLE-LISGLTGLVSLNVSN-SRITSAGLRHL-KPLKNLRSLTLE 380
+D + L G +G+ SL+VS +I+ L H+ + L LRSL+L
Sbjct: 398 KLEQLNLRSCDNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLN 457
Query: 381 SCKVTANDIKRLQS--RDLPNL 400
C++T + + ++ +L NL
Sbjct: 458 QCQITDHGMLKIAKALHELENL 479
Score = 128 (50.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 44/150 (29%), Positives = 76/150 (50%)
Query: 21 AITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNL-KGLMKLESLNIKWCNCITDSDMKP 78
++T G+K A + L +L+L C I G+ L +G + SL++ +C+ I+D +
Sbjct: 384 SVTDSGLKHLARMPKLEQLNLRSCDNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTH 443
Query: 79 LS-GLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEG-CP-VTAACLDSLSA-LGSLF 134
++ GL L+SL ++ ++TD G+ G C +T L +L+ L +L
Sbjct: 444 IAQGLYRLRSLSLNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLK 503
Query: 135 YLNLNRC-QLSDDGCEKFSKIGSLKVLNLG 163
++L C QLS G + K+ L+ LNLG
Sbjct: 504 TIDLYGCTQLSSKGIDIIMKLPKLQKLNLG 533
>TAIR|locus:2143320 [details] [associations]
symbol:AT5G27920 "AT5G27920" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009407 "toxin catabolic
process" evidence=RCA] EMBL:CP002688 GenomeReviews:BA000015_GR
InterPro:IPR006553 SMART:SM00367 KO:K10268 HOGENOM:HOG000244114
EMBL:BT005940 EMBL:AK117239 IPI:IPI00538711 RefSeq:NP_568502.1
UniGene:At.30778 ProteinModelPortal:Q8GZ31 SMR:Q8GZ31
EnsemblPlants:AT5G27920.1 GeneID:832858 KEGG:ath:AT5G27920
TAIR:At5g27920 InParanoid:Q8GZ31 OMA:GFWALAY PhylomeDB:Q8GZ31
ProtClustDB:CLSN2689880 Genevestigator:Q8GZ31 Uniprot:Q8GZ31
Length = 642
Score = 185 (70.2 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 119/408 (29%), Positives = 185/408 (45%)
Query: 22 ITAQGMKAFAGLINLVKLDLERCTRIH-GGLVNLK-GLMKLESLNIKWCNCITDSDMKPL 79
IT +++ A L+ L LD+ C I GGL L+ G L+ +++ C+ ++ S + +
Sbjct: 210 ITNDSIRSIALLVKLEVLDMVSCPLIDDGGLQFLENGSPSLQEVDVTRCDRVSLSGLISI 269
Query: 80 -SGLTNLKSLQIS-C-SKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSA-LGSLFY 135
G +++ L+ S C S+V+ S + Y +G V+ + L SLS+ SL
Sbjct: 270 VRGHPDIQLLKASHCVSEVSGSFLKYIKGLKHLKTIWIDGAHVSDSSLVSLSSSCRSLME 329
Query: 136 LNLNRC-QLSDDGCEKFSK-IGSLKVLNL---GFNEITDECLVHL-KGLTNLESLNLDSC 189
+ L+RC ++D G ++ +LK LNL GF +TD + + + NL +L L+SC
Sbjct: 330 IGLSRCVDVTDIGMISLARNCLNLKTLNLACCGF--VTDVAISAVAQSCRNLGTLKLESC 387
Query: 190 G-IGDEGLVNLTGLCNL-KCLELSDTQ-VGSSGLRHLSGLTNLESINLSF-TGISDGSLR 245
I ++GL +L L + L+L+D V GL ++S +NL+ + L T ISD +
Sbjct: 388 HLITEKGLQSLGCYSMLVQELDLTDCYGVNDRGLEYISKCSNLQRLKLGLCTNISDKGIF 447
Query: 246 KLAGLSSLKSLNLDARQIXXXXXXXXXXXXXXXXXDLFGARITDSGAAYL-RNFKNLRSL 304
+ S K L LD + FG D G A L R K+L L
Sbjct: 448 HIGSKCS-KLLELDLYRCAG-----------------FG----DDGLAALSRGCKSLNRL 485
Query: 305 EI--CGGGLTDAGVKHIKDXXXXXXXXXXXXXXXTDKTLELI-SGLTGLVSLNVSN-SRI 360
+ C LTD GV+ I+ T L I SG L L+V I
Sbjct: 486 ILSYCCE-LTDTGVEQIRQLELLSHLELRGLKNITGVGLAAIASGCKKLGYLDVKLCENI 544
Query: 361 TSAGLRHLKPL-KNLRSLTLESCKV--TA-----NDIKRLQSRDLPNL 400
+G L KNLR + L +C V TA +++ R+Q DL +L
Sbjct: 545 DDSGFWALAYFSKNLRQINLCNCSVSDTALCMLMSNLSRVQDVDLVHL 592
Score = 181 (68.8 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 91/380 (23%), Positives = 160/380 (42%)
Query: 29 AFAGLINLVKLDLERCTRIHG-GLVNLK-GLMKLESLNIKWCNCITDSDMKPLSGLTN-L 85
A + L +L +++C + GL + G L +++KWC I+D + L + L
Sbjct: 141 ALSSATGLRELKMDKCLSLSDVGLARIVVGCSNLNKISLKWCMEISDLGIDLLCKICKGL 200
Query: 86 KSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCP-VTAACLDSL-SALGSLFYLNLNRC-Q 142
KSL +S K+T+ I CP + L L + SL +++ RC +
Sbjct: 201 KSLDVSYLKITNDSIRSIALLVKLEVLDMVSCPLIDDGGLQFLENGSPSLQEVDVTRCDR 260
Query: 143 LSDDGCEKFSK----IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 198
+S G + I LK + +E++ L ++KGL +L+++ +D + D LV+
Sbjct: 261 VSLSGLISIVRGHPDIQLLKASHC-VSEVSGSFLKYIKGLKHLKTIWIDGAHVSDSSLVS 319
Query: 199 LTGLC-NLKCLELSD-TQVGSSGLRHLS-GLTNLESINLSFTG-ISDGSLRKLA------ 248
L+ C +L + LS V G+ L+ NL+++NL+ G ++D ++ +A
Sbjct: 320 LSSSCRSLMEIGLSRCVDVTDIGMISLARNCLNLKTLNLACCGFVTDVAISAVAQSCRNL 379
Query: 249 GLSSLKSLNLDARQIXXXXXXXXXXXXXXXXXDLFGARITDSGAAYLRNFKNLRSLEI-- 306
G L+S +L + D +G + D G Y+ NL+ L++
Sbjct: 380 GTLKLESCHLITEKGLQSLGCYSMLVQELDLTDCYG--VNDRGLEYISKCSNLQRLKLGL 437
Query: 307 CGGGLTDAGVKHI--KDXXXXXXXXXXXXXXXTDKTLELISGLTGLVSLNVSNS-RITSA 363
C ++D G+ HI K D L G L L +S +T
Sbjct: 438 CTN-ISDKGIFHIGSKCSKLLELDLYRCAGFGDDGLAALSRGCKSLNRLILSYCCELTDT 496
Query: 364 GLRHLKPLKNLRSLTLESCK 383
G+ ++ L+ L L L K
Sbjct: 497 GVEQIRQLELLSHLELRGLK 516
>UNIPROTKB|F1NKM1 [details] [associations]
symbol:FBXL14 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] GO:GO:0005737 GO:GO:0004842
GeneTree:ENSGT00700000104023 GO:GO:0042787 EMBL:AADN02006493
IPI:IPI00821408 Ensembl:ENSGALT00000037511 ArrayExpress:F1NKM1
Uniprot:F1NKM1
Length = 188
Score = 160 (61.4 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 57/188 (30%), Positives = 86/188 (45%)
Query: 208 LELSDTQ-VGSSGLRHLS-GLTNLESINLSFTG-ISDGSLRKLAGLSSLKSLNLDARQIX 264
L L D Q + ++HL+ GL L +NLSF G ISD L L+ +SSL+SLNL +
Sbjct: 1 LTLQDCQKLSDLSIKHLARGLGRLRQLNLSFCGGISDAGLLHLSHMSSLRSLNLRSCDNI 60
Query: 265 XXXXXXXXXXXXXXXXDL---FGARITDSGAAYL-RNFKNLRSLEICGGGLTDAGVKH-I 319
L F ++ D AY+ + LRSL +C ++D G+ +
Sbjct: 61 SDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLRSLSLCSCHISDEGINRMV 120
Query: 320 KDXXXXXXXXXXXXXXXTDKTLELISG-LTGLVSLNVSN-SRITSAGLRHLKPLKNLRSL 377
+ TDK LELI+ L+ L +++ +RIT GL + L L+ L
Sbjct: 121 RQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERITQLPCLKVL 180
Query: 378 TLESCKVT 385
L ++T
Sbjct: 181 NLGLWEMT 188
Score = 149 (57.5 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 54/182 (29%), Positives = 92/182 (50%)
Query: 39 LDLERCTRIHG-GLVNL-KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKV 95
L L+ C ++ + +L +GL +L LN+ +C I+D+ + LS +++L+SL + SC +
Sbjct: 1 LTLQDCQKLSDLSIKHLARGLGRLRQLNLSFCGGISDAGLLHLSHMSSLRSLNLRSCDNI 60
Query: 96 TDSGIAYXXXXXXXXXXXXEG-CP-VTAACLDSLS-ALGSLFYLNLNRCQLSDDGCEKFS 152
+D+GI + C V L ++ L L L+L C +SD+G +
Sbjct: 61 SDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLRSLSLCSCHISDEGINRMV 120
Query: 153 K-IGSLKVLNLG-FNEITDECLVHL-KGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCL 208
+ + L+ LN+G ITD+ L + + L+ L ++L C I GL +T L LK L
Sbjct: 121 RQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERITQLPCLKVL 180
Query: 209 EL 210
L
Sbjct: 181 NL 182
Score = 124 (48.7 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 41/154 (26%), Positives = 78/154 (50%)
Query: 22 ITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLK-GLMKLESLNIKWCNCITDSDMKPL 79
I+ G+ + + +L L+L C I G+++L G ++L L++ +C+ + D + +
Sbjct: 35 ISDAGLLHLSHMSSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYI 94
Query: 80 S-GLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEG-CP-VTAACLDSLSA-LGSLFY 135
+ GL L+SL + ++D GI G C +T L+ ++ L L
Sbjct: 95 AQGLDGLRSLSLCSCHISDEGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTG 154
Query: 136 LNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNEIT 168
++L C +++ G E+ +++ LKVLNLG E+T
Sbjct: 155 IDLYGCTRITKRGLERITQLPCLKVLNLGLWEMT 188
>WB|WBGene00015350 [details] [associations]
symbol:C02F5.7 species:6239 "Caenorhabditis elegans"
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
GO:GO:0071688 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 EMBL:FO080288 eggNOG:NOG300245 KO:K10268
HOGENOM:HOG000230659 OMA:LTENVFG PIR:G88523 PIR:S44609
RefSeq:NP_741248.1 RefSeq:NP_741249.1 ProteinModelPortal:P34284
SMR:P34284 IntAct:P34284 MINT:MINT-227871 STRING:P34284
PaxDb:P34284 PRIDE:P34284 EnsemblMetazoa:C02F5.7b.1
EnsemblMetazoa:C02F5.7b.2 GeneID:3564805 KEGG:cel:CELE_C02F5.7
UCSC:C02F5.7a.1 CTD:3564805 WormBase:C02F5.7a WormBase:C02F5.7b
InParanoid:P34284 NextBio:954051 Uniprot:P34284
Length = 466
Score = 180 (68.4 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 76/243 (31%), Positives = 114/243 (46%)
Query: 35 NLVKLDLERCTRI-HGGLVNL-KGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS 91
NL L L RC R+ NL + KL LN++ C+ ITD MK + G NL L IS
Sbjct: 150 NLEHLSLYRCKRVTDASCENLGRYCHKLNYLNLENCSSITDRAMKYIGDGCPNLSYLNIS 209
Query: 92 -CSKVTDSGIAYXXXX-XXXXXXXXEGCP-VTAACLDSLSA-LGSLFYLNLNRC-QLSDD 146
C + D G+ GC +T S+ A +G++ LNL +C QL+D
Sbjct: 210 WCDAIQDRGVQIILSNCKSLDTLILRGCEGLTENVFGSVEAHMGAIKKLNLLQCFQLTDI 269
Query: 147 GCEKFSK-IGSLKVLNLG-FNEITDECLVHL-KGLTNLESLNLDSCGI-GDEGLVNLTGL 202
+ + +L+ L + N+I+D LV L + NL+ L L C + GD G + L
Sbjct: 270 TVQNIANGATALEYLCMSNCNQISDRSLVSLGQHSHNLKVLELSGCTLLGDNGFIPLARG 329
Query: 203 CN-LKCLELSDTQ-VGSSGLRHLSG-LTNLESINLSFTG-ISDGSLRKLAGL--SSLKSL 256
C L+ L++ D + + L+ T L ++LS I+D S++ LA +L L
Sbjct: 330 CRQLERLDMEDCSLISDHTINSLANNCTALRELSLSHCELITDESIQNLASKHRETLNVL 389
Query: 257 NLD 259
LD
Sbjct: 390 ELD 392
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 61/246 (24%), Positives = 112/246 (45%)
Query: 39 LDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI----SC 92
L+LE C+ I + G L LNI WC+ I D ++ + L+N KSL C
Sbjct: 180 LNLENCSSITDRAMKYIGDGCPNLSYLNISWCDAIQDRGVQII--LSNCKSLDTLILRGC 237
Query: 93 SKVTDS--GIAYXXXXXXXXXXXXEGCPVTAACLDSLS-ALGSLFYLNLNRC-QLSDDGC 148
+T++ G + +T + +++ +L YL ++ C Q+SD
Sbjct: 238 EGLTENVFGSVEAHMGAIKKLNLLQCFQLTDITVQNIANGATALEYLCMSNCNQISDRSL 297
Query: 149 EKFSKIG-SLKVLNL-GFNEITDECLVHL-KGLTNLESLNLDSCG-IGDEGLVNLTGLCN 204
+ +LKVL L G + D + L +G LE L+++ C I D + +L C
Sbjct: 298 VSLGQHSHNLKVLELSGCTLLGDNGFIPLARGCRQLERLDMEDCSLISDHTINSLANNCT 357
Query: 205 -LKCLELSDTQ-VGSSGLRHLSGLTNLESINL----SFTGISDGSLRKLAGLSSLKSLNL 258
L+ L LS + + +++L+ + E++N+ + ++D +L L +LK ++L
Sbjct: 358 ALRELSLSHCELITDESIQNLAS-KHRETLNVLELDNCPQLTDSTLSHLRHCKALKRIDL 416
Query: 259 -DARQI 263
D + +
Sbjct: 417 YDCQNV 422
>DICTYBASE|DDB_G0291424 [details] [associations]
symbol:DDB_G0291424 "Transcription factor SKN7"
species:44689 "Dictyostelium discoideum" [GO:0035556 "intracellular
signal transduction" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
dictyBase:DDB_G0291424 EMBL:AAFI02000177 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 RefSeq:XP_635201.1
ProteinModelPortal:Q54EN9 EnsemblProtists:DDB0183884 GeneID:8628146
KEGG:ddi:DDB_G0291424 InParanoid:Q54EN9 OMA:MCANITD
ProtClustDB:CLSZ2429563 Uniprot:Q54EN9
Length = 902
Score = 184 (69.8 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 65/249 (26%), Positives = 116/249 (46%)
Query: 18 RNNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLKGL-MKLESLNIKWCNCITDSD 75
+NN++T QG+ + + L L LD+ C +I G GL L + L+ L+++ + +
Sbjct: 447 KNNSLTDQGIASLSSLAKLSSLDISYCEKIDGTGLEPLVDAGVPLQKLHMEGNSSLNLVK 506
Query: 76 M-KPLSGLTNLKSLQISCSKVTDSGIA-YXXXXXXXXXXXXEGCPVTAACLDSLSALGSL 133
+ LS L L SL + + +TD + L+S+S +L
Sbjct: 507 VFNSLSKLKTLNSLCVGNTNITDDMCKPLSLLTTLTHLDVARNTQLGNQGLESISKCVNL 566
Query: 134 FYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 192
L+++ C +++ G + +L+ L+ I DE + ++ L +L SL+L +
Sbjct: 567 IDLDISCCTKINALGIRHLGSLSNLQSLSAENCAIDDESMKYIGTLKSLSSLSLINNPFS 626
Query: 193 DEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSFTG-ISDGSLRKLAG- 249
D G N+ L L L+LS + + L H LT + +NL+F G ++D + L G
Sbjct: 627 DTGAKNIGNLTLLTTLDLSMCANITDAALVHFKNLTQISKLNLNFCGNLTDSGVTSLTGG 686
Query: 250 LSSLKSLNL 258
L LK+L +
Sbjct: 687 LGQLKTLGI 695
Score = 179 (68.1 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 67/244 (27%), Positives = 114/244 (46%)
Query: 22 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-- 79
IT MK+ IN+ K + + G+ +L L KL SL+I +C I + ++PL
Sbjct: 431 ITKGLMKSTLSSINISKNN----SLTDQGIASLSSLAKLSSLDISYCEKIDGTGLEPLVD 486
Query: 80 SGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEG-CPVTAACLDSLSALGSLFYLNL 138
+G+ K S + + G +T LS L +L +L++
Sbjct: 487 AGVPLQKLHMEGNSSLNLVKVFNSLSKLKTLNSLCVGNTNITDDMCKPLSLLTTLTHLDV 546
Query: 139 NR-CQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCGIGDEGL 196
R QL + G E SK +L L++ +I + HL L+NL+SL+ ++C I DE +
Sbjct: 547 ARNTQLGNQGLESISKCVNLIDLDISCCTKINALGIRHLGSLSNLQSLSAENCAIDDESM 606
Query: 197 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKS 255
+ L +L L L + +G +++ LT L +++LS I+D +L L+ +
Sbjct: 607 KYIGTLKSLSSLSLINNPFSDTGAKNIGNLTLLTTLDLSMCANITDAALVHFKNLTQISK 666
Query: 256 LNLD 259
LNL+
Sbjct: 667 LNLN 670
>UNIPROTKB|Q723K6 [details] [associations]
symbol:inlA "Internalin-A" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0009405 "pathogenesis"
evidence=ISS] [GO:0030260 "entry into host cell" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 Pfam:PF00746 GO:GO:0005618
GO:GO:0005576 GO:GO:0009405 eggNOG:COG4886 InterPro:IPR014756
SUPFAM:SSF81296 EMBL:AE017262 GenomeReviews:AE017262_GR
GO:GO:0030260 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR019948
InterPro:IPR019931 TIGRFAMs:TIGR01167 PROSITE:PS50847 EMBL:U25445
RefSeq:YP_013078.1 ProteinModelPortal:Q723K6 STRING:Q723K6
GeneID:2798475 KEGG:lmf:LMOf2365_0471 PATRIC:20322143 KO:K13730
OMA:NLTNINW ProtClustDB:CLSK225140 Gene3D:2.60.40.1220
InterPro:IPR014755 InterPro:IPR013378 InterPro:IPR012569
Pfam:PF09479 Pfam:PF08191 TIGRFAMs:TIGR02543 Uniprot:Q723K6
Length = 800
Score = 178 (67.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 77/239 (32%), Positives = 115/239 (48%)
Query: 19 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 78
NN IT + L NL +L+L T + L GL L+ L+ N +TD +KP
Sbjct: 151 NNQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSFG--NQVTD--LKP 202
Query: 79 LSGLTNLKSLQISCSKVTD-SGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLN 137
L+ LT L+ L IS +KV+D S +A + +T L L +L L+
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITP-----LGILTNLDELS 257
Query: 138 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 197
LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 258 LNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--IS 311
Query: 198 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 256
L GL L LEL++ Q+ + +S L NL + L F ISD + ++ L+ L+ L
Sbjct: 312 PLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISD--ISPVSSLTKLQRL 366
Score = 158 (60.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 70/247 (28%), Positives = 117/247 (47%)
Query: 24 AQGMKAFAGLINLV----KLDLERCTRIHGGLVNLKGLMKLESLN-IKWCNCITD--SDM 76
A+ MK G N+ + DL++ T + + +K + LE LN + N + +D+
Sbjct: 54 AEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDI 113
Query: 77 KPLSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYL 136
PL LT L + ++ +++ D I +T +D L L +L L
Sbjct: 114 TPLKDLTKLVDILMNNNQIAD--ITPLANLSNLTGLTLFNNQITD--IDPLKNLTNLNRL 169
Query: 137 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 196
L+ +SD S + SL+ L+ G N++TD L L LT LE L++ S + D +
Sbjct: 170 ELSSNTISD--ISALSGLTSLQQLSFG-NQVTD--LKPLANLTTLERLDISSNKVSDISV 224
Query: 197 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 256
L L NL+ L ++ Q+ S + L LTNL+ ++L+ + D + LA L++L L
Sbjct: 225 --LAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNGNQLKD--IGTLASLTNLTDL 278
Query: 257 NLDARQI 263
+L QI
Sbjct: 279 DLANNQI 285
Score = 143 (55.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 59/190 (31%), Positives = 95/190 (50%)
Query: 74 SDMKPLSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSL 133
+D+ PL+ L+NL L + +++TD E T + + +LS L SL
Sbjct: 133 ADITPLANLSNLTGLTLFNNQITD----IDPLKNLTNLNRLELSSNTISDISALSGLTSL 188
Query: 134 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 193
L+ Q++D + + + +L+ L++ N+++D + L LTNLESL + I D
Sbjct: 189 QQLSFGN-QVTD--LKPLANLTTLERLDISSNKVSDISV--LAKLTNLESLIATNNQISD 243
Query: 194 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 253
+ L L NL L L+ Q+ G L+ LTNL ++L+ IS+ L L+GL+ L
Sbjct: 244 --ITPLGILTNLDELSLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKL 297
Query: 254 KSLNLDARQI 263
L L A QI
Sbjct: 298 TELKLGANQI 307
Score = 134 (52.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 73/269 (27%), Positives = 116/269 (43%)
Query: 124 LDSLSALGSLFYLNLNRCQLSD-DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 182
+D L L +L +N + QL+D + +K+ + + N N+I D + L L+NL
Sbjct: 91 IDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNN---NQIAD--ITPLANLSNLT 145
Query: 183 SLNLDSCGIGD-EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 241
L L + I D + L NLT NL LELS + S + LSGLT+L+ LSF G
Sbjct: 146 GLTLFNNQITDIDPLKNLT---NLNRLELSSNTI--SDISALSGLTSLQQ--LSF-GNQV 197
Query: 242 GSLRKLAGLSSLKSLNLDARQIXXXXXXXXXXXXXXXXXDLFGARITDSGAAYLRNFKNL 301
L+ LA L++L+ L++ + ++ +I+D L NL
Sbjct: 198 TDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIAT--NNQISD--ITPLGILTNL 253
Query: 302 RSLEICGGGLTDAG----VKHIKDXXXXXXXXXXXX-XXXTDKTLEL------ISGLTGL 350
L + G L D G + ++ D K EL IS ++ L
Sbjct: 254 DELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 351 VSLN-VSNSRITSAGLRHLKPLKNLRSLT 378
L ++N + L + P+ NL++LT
Sbjct: 314 AGLTALTNLELNENQLEDISPISNLKNLT 342
Score = 130 (50.8 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 70/241 (29%), Positives = 110/241 (45%)
Query: 19 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 78
NN I + A L NL L L + + ++ L L +LN + T SD+
Sbjct: 129 NNQIA--DITPLANLSNLTGLTL-----FNNQITDIDPLKNLTNLNRLELSSNTISDISA 181
Query: 79 LSGLTNLKSLQISCSKVTD-SGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLN 137
LSGLT+L+ L ++VTD +A + ++ L L+ L SL N
Sbjct: 182 LSGLTSLQQLSFG-NQVTDLKPLANLTTLERLDISSNKVSDISV--LAKLTNLESLIATN 238
Query: 138 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 197
N Q+SD + +L L+L N++ D + L LTNL L+L + I + L
Sbjct: 239 -N--QISD--ITPLGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISN--LA 289
Query: 198 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN 257
L+GL L L+L Q+ S + L+GLT L ++ L+ + D + ++ L +L L
Sbjct: 290 PLSGLTKLTELKLGANQI--SNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLT 345
Query: 258 L 258
L
Sbjct: 346 L 346
>TAIR|locus:2149805 [details] [associations]
symbol:AT5G01720 "AT5G01720" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS;TAS]
[GO:0009407 "toxin catabolic process" evidence=RCA] PROSITE:PS50181
EMBL:CP002688 GenomeReviews:BA000015_GR InterPro:IPR006553
SMART:SM00367 EMBL:AL161946 eggNOG:NOG300245 KO:K10268
EMBL:AY091103 EMBL:AY122938 EMBL:AK229588 EMBL:AY086589
IPI:IPI00541061 PIR:T48193 RefSeq:NP_568094.2 UniGene:At.24859
ProteinModelPortal:Q8RWU5 SMR:Q8RWU5 PRIDE:Q8RWU5
EnsemblPlants:AT5G01720.1 GeneID:831688 KEGG:ath:AT5G01720
TAIR:At5g01720 HOGENOM:HOG000244114 InParanoid:Q8RWU5 OMA:SINLSYC
PhylomeDB:Q8RWU5 ProtClustDB:CLSN2690716 Genevestigator:Q8RWU5
Uniprot:Q8RWU5
Length = 665
Score = 173 (66.0 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 97/384 (25%), Positives = 159/384 (41%)
Query: 22 ITAQGMKAF-AGLINLVKLDLERCTRIHG--GLVNLKGLMKLESLNIKWCNCITDSDMKP 78
+T +G+ + +G L +LDL C+ + +LK + L+S+ + C+ +T +K
Sbjct: 265 LTHRGLTSLLSGAGYLQRLDLSHCSSVISLDFASSLKKVSALQSIRLDGCS-VTPDGLKA 323
Query: 79 LSGLTN-LKSLQIS-CSKVTDSGIAYXXXXXXXXXXXXEGC--PVTAACLDSLS-ALGSL 133
+ L N LK + +S C VTD G++ C ++ + ++ + L
Sbjct: 324 IGTLCNSLKEVSLSKCVSVTDEGLSSLVMKLKDLRKLDITCCRKLSRVSITQIANSCPLL 383
Query: 134 FYLNLNRCQLSDDGCEKFSKIGS----LKVLNLGFNEITDECLVHLKGLTNLESLNLDSC 189
L + C L E F IG L+ L+L NEI DE L + +L SL L C
Sbjct: 384 VSLKMESCSLVSR--EAFWLIGQKCRLLEELDLTDNEIDDEGLKSISSCLSLSSLKLGIC 441
Query: 190 -GIGDEGLVNL-TGLCNLKCLEL----SDTQVGSSGLRHLSGLTNLESINLSFT-GISDG 242
I D+GL + G NL+ L+L T VG S + G +LE+IN+S+ I+D
Sbjct: 442 LNITDKGLSYIGMGCSNLRELDLYRSVGITDVGISTIAQ--GCIHLETINISYCQDITDK 499
Query: 243 SLRKLAGLSSLKSL-NLDARQIXXXXXXXXXXX-XXXXXXDLFGA-RITDSGAAYLRNF- 298
SL L+ S L++ + I DL I D+G L +F
Sbjct: 500 SLVSLSKCSLLQTFESRGCPNITSQGLAAIAVRCKRLAKVDLKKCPSINDAGLLALAHFS 559
Query: 299 KNLRSLEICGGGLTDAGVKHIKDXXXXXXXXXXXXXXXTDKTLELISGLTGLVSLNVSNS 358
+NL+ + + +T+ G+ + + + + + L G L +
Sbjct: 560 QNLKQINVSDTAVTEVGLLSLANIGCLQNIAVVNSSGL--RPSGVAAALLGCGGLRKAKL 617
Query: 359 RITSAGLRHLKPLKNLRSLTLESC 382
A LR L PL + L C
Sbjct: 618 H---ASLRSLLPLSLIHHLEARGC 638
Score = 146 (56.5 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 95/384 (24%), Positives = 162/384 (42%)
Query: 35 NLVKLDLERC---TRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQI 90
+L +L L RC T + G + + G KL ++++KWC + D + L+ ++++L +
Sbjct: 151 SLERLKLGRCKMLTDMGIGCIAV-GCKKLNTVSLKWCVGVGDLGVGLLAVKCKDIRTLDL 209
Query: 91 SCSKVTDSGIAYXXXXXXXXXXXXEGC-PVTAACLDSLSA-LGSLFYLNLNRCQ-LSDDG 147
S +T + EGC V L SL SL L+ + CQ L+ G
Sbjct: 210 SYLPITGKCLHDILKLQHLEELLLEGCFGVDDDSLKSLRHDCKSLKKLDASSCQNLTHRG 269
Query: 148 CEKF-SKIGSLKVLNLGF--NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 204
S G L+ L+L + I+ + LK ++ L+S+ LD C + +GL + LCN
Sbjct: 270 LTSLLSGAGYLQRLDLSHCSSVISLDFASSLKKVSALQSIRLDGCSVTPDGLKAIGTLCN 329
Query: 205 -LKCLELSD-TQVGSSGLRHL-SGLTNLESINLSFTG-ISDGSLRKLAGLSSLK-SLNLD 259
LK + LS V GL L L +L ++++ +S S+ ++A L SL ++
Sbjct: 330 SLKEVSLSKCVSVTDEGLSSLVMKLKDLRKLDITCCRKLSRVSITQIANSCPLLVSLKME 389
Query: 260 ARQIXXXXXXXXXXXX--XXXXXDLFGARITDSGAAYLRNFKNLRSLE--ICGGGLTDAG 315
+ + DL I D G + + +L SL+ IC +TD G
Sbjct: 390 SCSLVSREAFWLIGQKCRLLEELDLTDNEIDDEGLKSISSCLSLSSLKLGICLN-ITDKG 448
Query: 316 VKHI-KDXXXXXXXXXXXXXXXTDKTLELIS-GLTGLVSLNVSNSR-ITSAGLRHLKPLK 372
+ +I TD + I+ G L ++N+S + IT L L
Sbjct: 449 LSYIGMGCSNLRELDLYRSVGITDVGISTIAQGCIHLETINISYCQDITDKSLVSLSKCS 508
Query: 373 NLRSLTLESC-KVTANDIKRLQSR 395
L++ C +T+ + + R
Sbjct: 509 LLQTFESRGCPNITSQGLAAIAVR 532
Score = 127 (49.8 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 63/255 (24%), Positives = 104/255 (40%)
Query: 18 RNNAITAQGMKAFA-GLINLVKLDLERCTRIHGG-LVNLKGLMKLESLNIKWCNCITDSD 75
R+ + +A G+ A +NLV++DL T + + LE L + C +TD
Sbjct: 108 RSGSFSAAGLLRLALKCVNLVEIDLSNATEMRDADAAVVAEARSLERLKLGRCKMLTDMG 167
Query: 76 MKPLS-GLTNLKSLQIS-CSKVTDSGIAYXXXX-XXXXXXXXEGCPVTAACLDSLSALGS 132
+ ++ G L ++ + C V D G+ P+T CL + L
Sbjct: 168 IGCIAVGCKKLNTVSLKWCVGVGDLGVGLLAVKCKDIRTLDLSYLPITGKCLHDILKLQH 227
Query: 133 LFYLNLNRC-QLSDDGCEKFSK-IGSLKVLNLGF-NEITDECLVHL-KGLTNLESLNLDS 188
L L L C + DD + SLK L+ +T L L G L+ L+L
Sbjct: 228 LEELLLEGCFGVDDDSLKSLRHDCKSLKKLDASSCQNLTHRGLTSLLSGAGYLQRLDLSH 287
Query: 189 CG--IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN-LESINLS-FTGISDGSL 244
C I + +L + L+ + L V GL+ + L N L+ ++LS ++D L
Sbjct: 288 CSSVISLDFASSLKKVSALQSIRLDGCSVTPDGLKAIGTLCNSLKEVSLSKCVSVTDEGL 347
Query: 245 RKLA-GLSSLKSLNL 258
L L L+ L++
Sbjct: 348 SSLVMKLKDLRKLDI 362
Score = 126 (49.4 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 84/362 (23%), Positives = 141/362 (38%)
Query: 35 NLVKLDLERCTRI-HGGLVNL-KGLMKLESLNIKWCNCITDSDM-KPLSGLTNLKSLQIS 91
+L KLD C + H GL +L G L+ L++ C+ + D L ++ L+S+++
Sbjct: 253 SLKKLDASSCQNLTHRGLTSLLSGAGYLQRLDLSHCSSVISLDFASSLKKVSALQSIRLD 312
Query: 92 CSKVTDSGI-AYXXXXXXXXXXXXEGC-PVTAACLDSL-SALGSLFYLNLNRCQLSDDGC 148
VT G+ A C VT L SL L L L++ C C
Sbjct: 313 GCSVTPDGLKAIGTLCNSLKEVSLSKCVSVTDEGLSSLVMKLKDLRKLDIT-C------C 365
Query: 149 EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL-CNL-K 206
K S++ +I + C + L SL ++SC + L G C L +
Sbjct: 366 RKLSRVS--------ITQIANSCPL-------LVSLKMESCSLVSREAFWLIGQKCRLLE 410
Query: 207 CLELSDTQVGSSGLRHLSGLTNLESINLSFT-GISDGSLRKLA-GLSSLKSLNLDARQIX 264
L+L+D ++ GL+ +S +L S+ L I+D L + G S+L+ L+L R +
Sbjct: 411 ELDLTDNEIDDEGLKSISSCLSLSSLKLGICLNITDKGLSYIGMGCSNLRELDL-YRSVG 469
Query: 265 XXXXXXXXXXXXXXXXDLFGAR----ITDSGAAYLRNFKNLRSLEICG-GGLTDAGVKHI 319
+ ITD L L++ E G +T G+ I
Sbjct: 470 ITDVGISTIAQGCIHLETINISYCQDITDKSLVSLSKCSLLQTFESRGCPNITSQGLAAI 529
Query: 320 KDXXXXXXXXXXXXX-XXTDKTLELISGLT-GLVSLNVSNSRITSAGLRHLKPLKNLRSL 377
D L ++ + L +NVS++ +T GL L + L+++
Sbjct: 530 AVRCKRLAKVDLKKCPSINDAGLLALAHFSQNLKQINVSDTAVTEVGLLSLANIGCLQNI 589
Query: 378 TL 379
+
Sbjct: 590 AV 591
Score = 120 (47.3 bits), Expect = 0.00040, P = 0.00040
Identities = 54/228 (23%), Positives = 104/228 (45%)
Query: 19 NNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNL-KGLMKLESLNIKWCNCITDSDM 76
+N I +G+K+ + ++L L L C I GL + G L L++ ITD +
Sbjct: 416 DNEIDDEGLKSISSCLSLSSLKLGICLNITDKGLSYIGMGCSNLRELDLYRSVGITDVGI 475
Query: 77 KPLS-GLTNLKSLQIS-CSKVTDSGIAYXXXXXXXXXXXXEGCP-VTAACLDSLSA-LGS 132
++ G +L+++ IS C +TD + GCP +T+ L +++
Sbjct: 476 STIAQGCIHLETINISYCQDITDKSLVSLSKCSLLQTFESRGCPNITSQGLAAIAVRCKR 535
Query: 133 LFYLNLNRC-QLSDDGCEKFSKIG-SLKVLNLGFNEITDECLVHLKGLTNLESLNL-DSC 189
L ++L +C ++D G + +LK +N+ +T+ L+ L + L+++ + +S
Sbjct: 536 LAKVDLKKCPSINDAGLLALAHFSQNLKQINVSDTAVTEVGLLSLANIGCLQNIAVVNSS 595
Query: 190 GIGDEGLVN-LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 236
G+ G+ L G L+ +L L LS + +LE+ +F
Sbjct: 596 GLRPSGVAAALLGCGGLRKAKL---HASLRSLLPLSLIHHLEARGCAF 640
>MGI|MGI:2448488 [details] [associations]
symbol:Fbxl16 "F-box and leucine-rich repeat protein 16"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001810
PROSITE:PS50181 MGI:MGI:2448488 SUPFAM:SSF81383 EMBL:BC132383
IPI:IPI00108960 RefSeq:NP_001157697.1 UniGene:Mm.152289
ProteinModelPortal:A2RT62 SMR:A2RT62 PaxDb:A2RT62 PRIDE:A2RT62
Ensembl:ENSMUST00000045692 GeneID:214931 KEGG:mmu:214931 CTD:146330
eggNOG:NOG279509 HOGENOM:HOG000060108 HOVERGEN:HBG051675
InParanoid:A2RT62 KO:K10282 OMA:AGLEVML OrthoDB:EOG4PRSQR
NextBio:374521 Bgee:A2RT62 CleanEx:MM_FBXL16 Genevestigator:A2RT62
Uniprot:A2RT62
Length = 479
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 71/255 (27%), Positives = 121/255 (47%)
Query: 18 RNNAITAQGMKAFAGLIN-LVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSD 75
+ + IT G++ + +V+L+L C GL + ++ SL++ C + D
Sbjct: 201 KRSTITDAGLEVMLEQMQGVVRLELSGCNDFTEAGLWSSLSA-RITSLSVSDCINVADDA 259
Query: 76 MKPLSGLT-NLKSLQISCSKVTDSGIAYXXXXXXXXXXXXE--GC-PVTA-ACLDSLSAL 130
+ +S L NL L + VTD+ +AY C +T ++ + +L
Sbjct: 260 IAAISQLLPNLAELSLQAYHVTDTALAYFTARQGHSTHTLRLLSCWEITNHGVVNVVHSL 319
Query: 131 GSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLNLGF-NEITDECLVHLK-GLTNLESLNL 186
+L L+L+ C +++DDG E ++ + L+ L+L + ITD L ++ L LE L L
Sbjct: 320 PNLTSLSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEELVL 379
Query: 187 DSC-GIGDEGLVNLTGLCNLKCLELS-DTQVGSSGLRHLSGLTNLESINLSFTGI-SDGS 243
D C I D GL L+ + +L+ L L QV GL+HL + NL ++L+ + +
Sbjct: 380 DRCVRITDTGLSYLSTMSSLRSLYLRWCCQVQDFGLKHLLAMRNLRLLSLAGCPLLTTTG 439
Query: 244 LRKLAGLSSLKSLNL 258
L L L L+ L L
Sbjct: 440 LSGLVQLQELEELEL 454
Score = 124 (48.7 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 70/283 (24%), Positives = 122/283 (43%)
Query: 137 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL-VHLKGLTNLESLNLDSCG-IGDE 194
+L+ C+ D+ SK G +K ++L + ITD L V L+ + + L L C +
Sbjct: 178 DLDICEFIDN--YSLSKKG-VKAMSLKRSTITDAGLEVMLEQMQGVVRLELSGCNDFTEA 234
Query: 195 GL-----VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAG 249
GL +T L C+ ++D + + + L L NL ++L ++D +L
Sbjct: 235 GLWSSLSARITSLSVSDCINVADDAIAA--ISQL--LPNLAELSLQAYHVTDTALAYFTA 290
Query: 250 LS--SLKSLNL-DARQIXXXXXXXXXXXX-XXXXXDLFG-ARITDSGAAYL-RNFKNLRS 303
S +L L +I L G +++TD G + N + LRS
Sbjct: 291 RQGHSTHTLRLLSCWEITNHGVVNVVHSLPNLTSLSLSGCSKVTDDGVELVAENLRKLRS 350
Query: 304 LEI--CGGGLTDAGVKHIK-DXXXXXXXXXXXXXXXTDKTLELISGLTGLVSLNVS-NSR 359
L++ C +TD ++++ D TD L +S ++ L SL + +
Sbjct: 351 LDLSWCPR-ITDMALEYVACDLHRLEELVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQ 409
Query: 360 ITSAGLRHLKPLKNLRSLTLESCKV-TANDIKRL-QSRDLPNL 400
+ GL+HL ++NLR L+L C + T + L Q ++L L
Sbjct: 410 VQDFGLKHLLAMRNLRLLSLAGCPLLTTTGLSGLVQLQELEEL 452
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 68/249 (27%), Positives = 112/249 (44%)
Query: 85 LKSLQISCSKVTDSGI-AYXXXXXXXXXXXXEGC-PVTAACL-DSLSALGSLFYLNLNRC 141
+K++ + S +TD+G+ GC T A L SLSA + L+++ C
Sbjct: 195 VKAMSLKRSTITDAGLEVMLEQMQGVVRLELSGCNDFTEAGLWSSLSA--RITSLSVSDC 252
Query: 142 -QLSDDGCEKFSKI-GSLKVLNLGFNEITDECLVHLKGLT--NLESLNLDSCG-IGDEGL 196
++DD S++ +L L+L +TD L + + +L L SC I + G+
Sbjct: 253 INVADDAIAAISQLLPNLAELSLQAYHVTDTALAYFTARQGHSTHTLRLLSCWEITNHGV 312
Query: 197 VNLT-GLCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINLSFTG-ISDGSLRKLA-GLS 251
VN+ L NL L LS ++V G+ ++ L L S++LS+ I+D +L +A L
Sbjct: 313 VNVVHSLPNLTSLSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLH 372
Query: 252 SLKSLNLDARQIXXXXXXXXXXXXXXXXXDLF---GARITDSGAAYLRNFKNLRSLEICG 308
L+ L LD R + L+ ++ D G +L +NLR L + G
Sbjct: 373 RLEELVLD-RCVRITDTGLSYLSTMSSLRSLYLRWCCQVQDFGLKHLLAMRNLRLLSLAG 431
Query: 309 GGL-TDAGV 316
L T G+
Sbjct: 432 CPLLTTTGL 440
>UNIPROTKB|Q723P8 [details] [associations]
symbol:inlF "Internalin" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] [GO:0009405 "pathogenesis" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 Pfam:PF00746 GO:GO:0005618
GO:GO:0009405 GO:GO:0003824 eggNOG:COG4886 InterPro:IPR014756
SUPFAM:SSF81296 EMBL:AE017262 GenomeReviews:AE017262_GR
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR019948
InterPro:IPR019931 TIGRFAMs:TIGR01167 Gene3D:2.60.40.1220
InterPro:IPR014755 InterPro:IPR013378 InterPro:IPR012569
Pfam:PF09479 Pfam:PF08191 TIGRFAMs:TIGR02543 RefSeq:YP_013036.1
PDB:4FMZ PDBsum:4FMZ ProteinModelPortal:Q723P8 STRING:Q723P8
GeneID:2797185 KEGG:lmf:LMOf2365_0429 PATRIC:20322071
HOGENOM:HOG000011905 OMA:QGYTFDG ProtClustDB:CLSK225141
Uniprot:Q723P8
Length = 823
Score = 165 (63.1 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 64/232 (27%), Positives = 110/232 (47%)
Query: 33 LINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISC 92
L NL K+ H L +L L + LN D+ P++ LT+L SL ++
Sbjct: 161 LANLTKMYSLNLGANHN-LSDLSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNY 219
Query: 93 SKVTD-SGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF 151
+++ D S +A + +T +++ L SL + +++D
Sbjct: 220 NQIEDISPLASLTSLHYFTAYVNQITDITPVA--NMTRLNSL---KIGNNKITD--LSPL 272
Query: 152 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELS 211
+ + L L +G N+I+D + +K LT L+ LN+ S I D ++N L L L L+
Sbjct: 273 ANLSQLTWLEIGTNQISD--INAVKDLTKLKMLNVGSNQISDISVLN--NLSQLNSLFLN 328
Query: 212 DTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 263
+ Q+G+ + + GLTNL ++ LS I+D +R LA LS + S + A Q+
Sbjct: 329 NNQLGNEDMEVIGGLTNLTTLFLSQNHITD--IRPLASLSKMDSADF-ANQV 377
Score = 119 (46.9 bits), Expect = 0.00067, P = 0.00067
Identities = 70/255 (27%), Positives = 117/255 (45%)
Query: 20 NAITAQGMKAF---AGLINLV-KLDLERCTR-IHGG--LVNLKG---LMKLESLNIKWCN 69
+A A+G++A A + ++V + +LE T+ + G + +++G L LE LN+ N
Sbjct: 51 DADLAEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIEYLTNLEYLNLNG-N 109
Query: 70 CITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSA 129
ITD + PLS L L +L I +K+TD A E + + L+
Sbjct: 110 QITD--ISPLSNLVKLTNLYIGTNKITDIS-ALQNLTNLRELYLNED---NISDISPLAN 163
Query: 130 LGSLFYLNLN-RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 188
L ++ LNL LSD S + L L + +++ D + + LT+L SL+L+
Sbjct: 164 LTKMYSLNLGANHNLSD--LSPLSNMTGLNYLTVTESKVKD--VTPIANLTDLYSLSLNY 219
Query: 189 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 248
I D + L L +L Q+ + + ++ +T L S+ + I+D L LA
Sbjct: 220 NQIED--ISPLASLTSLHYFTAYVNQI--TDITPVANMTRLNSLKIGNNKITD--LSPLA 273
Query: 249 GLSSLKSLNLDARQI 263
LS L L + QI
Sbjct: 274 NLSQLTWLEIGTNQI 288
>TAIR|locus:2145512 [details] [associations]
symbol:EBF2 "EIN3-binding F box protein 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009723 "response to ethylene stimulus" evidence=IMP]
[GO:0010105 "negative regulation of ethylene mediated signaling
pathway" evidence=TAS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IPI] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0009723
SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0006511 GO:GO:0019005
GO:GO:0010105 InterPro:IPR006553 SMART:SM00367 EMBL:AC006258
eggNOG:NOG300245 HOGENOM:HOG000238885 KO:K14515 EMBL:AJ609239
EMBL:AY485830 EMBL:AK227858 IPI:IPI00517412 RefSeq:NP_197917.1
UniGene:At.19865 UniGene:At.72267 ProteinModelPortal:Q708Y0
SMR:Q708Y0 IntAct:Q708Y0 STRING:Q708Y0 PRIDE:Q708Y0
EnsemblPlants:AT5G25350.1 GeneID:832607 KEGG:ath:AT5G25350
TAIR:At5g25350 InParanoid:Q708Y0 OMA:IGRCCAK PhylomeDB:Q708Y0
ProtClustDB:CLSN2916408 Genevestigator:Q708Y0 Uniprot:Q708Y0
Length = 623
Score = 163 (62.4 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 108/406 (26%), Positives = 175/406 (43%)
Query: 21 AITAQGMKAFAGLINLV-KLDLERCTRI-HGGLVNL-KGLMKLESLNIKWCNCITDSDMK 77
A++ G+ A ++ KLDL RC I GLV + + + L L I C+ + + ++
Sbjct: 179 AVSDLGLSEIARSCPMIEKLDLSRCPGITDSGLVAIAENCVNLSDLTIDSCSGVGNEGLR 238
Query: 78 PLSG-LTNLKSLQI-SCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFY 135
++ NL+S+ I SC ++ D G+A+ G +T L L+ G
Sbjct: 239 AIARRCVNLRSISIRSCPRIGDQGVAFLLAQA--------GSYLTKVKLQMLNVSG---- 286
Query: 136 LNLNRCQLSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC-GIGD 193
L+ + G + + L + L G NE + + KGL L+SL++ SC G+ D
Sbjct: 287 --LSLAVIGHYG----AAVTDLVLHGLQGVNEKGFWVMGNAKGLKKLKSLSVMSCRGMTD 340
Query: 194 EGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHLS-GLTNLESINLSFTG-ISD-GSLRKLA 248
GL + C +LK + L+ V GL L+ +LES+ L I+ G + L
Sbjct: 341 VGLEAVGNGCPDLKHVSLNKCLLVSGKGLVALAKSALSLESLKLEECHRINQFGLMGFLM 400
Query: 249 GLSS-LKSLNLDARQIXXXXXXXXXXXXXXXXXDLFGARIT------DSGAAYLRNF-KN 300
S LK+ +L A + L I D+ A+L F
Sbjct: 401 NCGSKLKAFSL-ANCLGISDFNSESSLPSPSCSSLRSLSIRCCPGFGDASLAFLGKFCHQ 459
Query: 301 LRSLEICG-GGLTDAGVKHI--KDXXXXXXXXXXXXXXXTDKTLELISGLTG--LVSLNV 355
L+ +E+CG G+TDAGV+ + + +D T+ IS G L SLN+
Sbjct: 460 LQDVELCGLNGVTDAGVRELLQSNNVGLVKVNLSECINVSDNTVSAISVCHGRTLESLNL 519
Query: 356 SNSR-ITSAGLRHL-KPLKNLRSLTLESCKVTANDIKRLQSRDLPN 399
+ IT+A L + K ++ L + + V+ + IK L S PN
Sbjct: 520 DGCKNITNASLVAVAKNCYSVNDLDISNTLVSDHGIKALASS--PN 563
Score = 139 (54.0 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 74/279 (26%), Positives = 121/279 (43%)
Query: 53 NLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQIS-CSKVTDSG-IAYXXXXXXX 109
N KGL KL+SL++ C +TD ++ + +G +LK + ++ C V+ G +A
Sbjct: 320 NAKGLKKLKSLSVMSCRGMTDVGLEAVGNGCPDLKHVSLNKCLLVSGKGLVALAKSALSL 379
Query: 110 XXXXXEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLN-LGFNEIT 168
E C ++ +G F +N C G SK+ + + N LG ++
Sbjct: 380 ESLKLEECHR----INQFGLMG--FLMN---C-----G----SKLKAFSLANCLGISDFN 421
Query: 169 DECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCN-LKCLELSDTQ-VGSSGLRHL-- 223
E + ++L SL++ C G GD L L C+ L+ +EL V +G+R L
Sbjct: 422 SESSLPSPSCSSLRSLSIRCCPGFGDASLAFLGKFCHQLQDVELCGLNGVTDAGVRELLQ 481
Query: 224 SGLTNLESINLS-FTGISDGSLRKLAGLS--SLKSLNLDA-RQIXXXXXXXXXXX-XXXX 278
S L +NLS +SD ++ ++ +L+SLNLD + I
Sbjct: 482 SNNVGLVKVNLSECINVSDNTVSAISVCHGRTLESLNLDGCKNITNASLVAVAKNCYSVN 541
Query: 279 XXDLFGARITDSGAAYLR---NFKNLRSLEICG-GGLTD 313
D+ ++D G L N NL+ L I G +TD
Sbjct: 542 DLDISNTLVSDHGIKALASSPNHLNLQVLSIGGCSSITD 580
>UNIPROTKB|Q723V1 [details] [associations]
symbol:LMOf2365_0374 "Internalin" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0009405 "pathogenesis"
evidence=ISS] [GO:0030260 "entry into host cell" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009405 eggNOG:COG4886
InterPro:IPR014756 SUPFAM:SSF81296 EMBL:AE017262
GenomeReviews:AE017262_GR GO:GO:0030260 InterPro:IPR025875
Pfam:PF12799 InterPro:IPR019931 TIGRFAMs:TIGR01167
Gene3D:2.60.40.1220 InterPro:IPR014755 InterPro:IPR013378
InterPro:IPR012569 Pfam:PF09479 Pfam:PF08191 TIGRFAMs:TIGR02543
HOGENOM:HOG000011905 RefSeq:YP_012983.1 ProteinModelPortal:Q723V1
STRING:Q723V1 GeneID:2797573 KEGG:lmf:LMOf2365_0374 PATRIC:20321953
OMA:QINNLQG ProtClustDB:CLSK225039 Uniprot:Q723V1
Length = 589
Score = 158 (60.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 72/244 (29%), Positives = 115/244 (47%)
Query: 23 TAQGMKAFAGLINLVKLD-LERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 81
T G + A ++ LD + T G+ +L+G+ L +L SD+ PL G
Sbjct: 54 TTLGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYLTNLGTLILTGNQVSDISPLKG 113
Query: 82 LTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLNLNRC 141
LTNL LQ+S + ++D I+ VT + LS L +L L L
Sbjct: 114 LTNLTMLQLSGNPISD--ISALSNLKNLQALDINDAQVTD--ITPLSGLTNLKGLGLYNN 169
Query: 142 QLSD-DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD-EGLVNL 199
QL + G ++ SL V N N++T+ L L+ L+NL L + I + +GL NL
Sbjct: 170 QLENLSGVNSLHQLRSLNVSN---NKLTN--LDELQALSNLSVLYANENQINNLQGLSNL 224
Query: 200 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 259
NL L+LS Q+ + L+GLT ++++ +S ISD + L+ L +L L++
Sbjct: 225 N---NLFLLDLSANQIVDT--TPLAGLTKVQTLYVSNNQISD--VTGLSSLINLDWLDIS 277
Query: 260 ARQI 263
+I
Sbjct: 278 QNKI 281
>DICTYBASE|DDB_G0288031 [details] [associations]
symbol:DDB_G0288031 "putative actin binding protein"
species:44689 "Dictyostelium discoideum" [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS51089
dictyBase:DDB_G0288031 GO:GO:0007010 Gene3D:1.10.950.10
SUPFAM:SSF47050 EMBL:AAFI02000107 InterPro:IPR025697 Pfam:PF13236
eggNOG:NOG300245 RefSeq:XP_636947.1 ProteinModelPortal:Q54JI4
EnsemblProtists:DDB0232248 GeneID:8626422 KEGG:ddi:DDB_G0288031
InParanoid:Q54JI4 OMA:LILEACY Uniprot:Q54JI4
Length = 2209
Score = 164 (62.8 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 101/417 (24%), Positives = 174/417 (41%)
Query: 17 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGL-VNLKGLMKLESLNIKWCNCITDSD 75
R + I+ +G K F L LDL C+++ + + L + LE L ++ C +TD
Sbjct: 1695 RNQSRISDEGFKRFQSWHCLKILDLSGCSKVSDNIFLKLPKCLNLEQLILEACYNLTDVS 1754
Query: 76 MKPLSG-LTNLKSLQIS-CSKVTDSGI-AYXXXXXXXXXXXXEGCPVTAACLDSLSALGS 132
+ S + NL L + C +TD I + C + +S+ + +
Sbjct: 1755 VIGFSQQMPNLWKLSLKGCKFITDRSIDSLTNNCKKIKDLKLSRCH--SLTNESVEWIAN 1812
Query: 133 LFYLNLNRCQLSDDGCEKFSKIGSLKVL-------NLGFNE---ITDECLVHL-KGLTNL 181
L L R LS C + ++ +++L ++ F+E ++D+ + + + NL
Sbjct: 1813 RINLTLERIDLSM--CPQIAESALIQILERCDQLSSINFSENPKVSDDLITVINERFPNL 1870
Query: 182 ESLNLDSCG-IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS-GLTNLESINLSFT-G 238
L LDSCG I +GL NL+ L LK L + +Q+ + L L+ L NL S++L
Sbjct: 1871 VDLRLDSCGKISSDGL-NLSNLIQLKTLSIIKSQIYHNSLSLLTCTLLNLTSLSLKGCFQ 1929
Query: 239 ISDGSLRKLAGLSSLKSLNLDA--RQIXXXXXXXXXXXXXXXXXDLFGA-RITDSGAAYL 295
++D S + L L+SL+L R + D+ R+T +
Sbjct: 1930 LTDTSFFSIGQLKQLESLDLSENYRLLDSSMVYICRNLTKLKRLDISSCLRLTTKTFFLI 1989
Query: 296 RNF-KNLRSLEICG-GGLTDAGVKHIKDXXXXXXXXXXXX-XXXTDKTL-ELISGLTGL- 350
+ + L + G G L DA + +I + TDK + L + L
Sbjct: 1990 GKYLTKISELVLSGCGNLNDASLIYISENLLAIQQLDISGCQMITDKGIASLANNQVHLQ 2049
Query: 351 -VSLNVSNSRITSAGLRHLK---PLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSF 403
VSL NS I+ + LK PL L L+L S + ++ + D+ ++F
Sbjct: 2050 VVSLKDCNS-ISQQSIDILKTKCPLFKLVRLSLHSLPLVG-ELMNSPTTDILKPINF 2104
>TAIR|locus:2005629 [details] [associations]
symbol:AT1G75640 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM;IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=ISS] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS51450 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 eggNOG:COG4886 InterPro:IPR025875
Pfam:PF12799 HOGENOM:HOG000116551 InterPro:IPR013210 Pfam:PF08263
EMBL:AC006434 ProtClustDB:CLSN2682550 EMBL:AK226809 IPI:IPI00520939
RefSeq:NP_177694.1 UniGene:At.43227 ProteinModelPortal:Q9LR04
SMR:Q9LR04 PaxDb:Q9LR04 PRIDE:Q9LR04 ProMEX:Q9LR04
EnsemblPlants:AT1G75640.1 GeneID:843899 KEGG:ath:AT1G75640
TAIR:At1g75640 InParanoid:Q9LR04 OMA:QVLNVAH PhylomeDB:Q9LR04
Genevestigator:Q9LR04 Uniprot:Q9LR04
Length = 1140
Score = 154 (59.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 68/280 (24%), Positives = 118/280 (42%)
Query: 125 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 184
D LS G L LNLN L+ + +K+ +L +LNL FN + E ++ L +L L
Sbjct: 429 DLLSLYG-LETLNLNENHLTGAIPSEITKLANLTILNLSFNRFSGEVPSNVGDLKSLSVL 487
Query: 185 NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSL 244
N+ CG+ V+++GL L+ L++S ++ L GL +L+ + L + G +
Sbjct: 488 NISGCGLTGRIPVSISGLMKLQVLDISKQRISGQLPVELFGLPDLQVVALG-NNLLGGVV 546
Query: 245 RK-LAGLSSLKSLNLDARQIXXXXXXXXXXXXXXXXXDLFGARITDSGAAYLRNFKNLRS 303
+ + L SLK LNL + L RI+ + + N +L
Sbjct: 547 PEGFSSLVSLKYLNLSSNLFSGHIPKNYGFLKSLQVLSLSHNRISGTIPPEIGNCSSLEV 606
Query: 304 LEICGGGLTDAGVKHIKDXXXXXXXXXXXXXXXTDKTLELISGLTGLVSLNVSNSRITSA 363
LE+ G + T + IS + L SL ++++ ++
Sbjct: 607 LEL-GSNSLKGHIPVYVSKLSLLKKLDLSHNSLTGSIPDQISKDSSLESLLLNSNSLSGR 665
Query: 364 GLRHLKPLKNLRSLTLESCKVTA---NDIKRLQSRDLPNL 400
L L NL +L L S ++ + + + RL+ + NL
Sbjct: 666 IPESLSRLTNLTALDLSSNRLNSTIPSSLSRLRFLNYFNL 705
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 64/263 (24%), Positives = 110/263 (41%)
Query: 119 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 178
+T A ++ L +L LNL+ + S + + SL VLN+ +T V + GL
Sbjct: 446 LTGAIPSEITKLANLTILNLSFNRFSGEVPSNVGDLKSLSVLNISGCGLTGRIPVSISGL 505
Query: 179 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG 238
L+ L++ I + V L GL +L+ + L + +G S L +L+ +NLS +
Sbjct: 506 MKLQVLDISKQRISGQLPVELFGLPDLQVVALGNNLLGGVVPEGFSSLVSLKYLNLS-SN 564
Query: 239 ISDGSLRKLAG-LSSLKSLNLDARQIXXXXXXXXXXXXXXXXXDLFGARITDSGAAYLRN 297
+ G + K G L SL+ L+L +I +L + Y+
Sbjct: 565 LFSGHIPKNYGFLKSLQVLSLSHNRISGTIPPEIGNCSSLEVLELGSNSLKGHIPVYVSK 624
Query: 298 FKNLRSLEICGGGLTDAGVKHI-KDXXXXXXXXXXXXXXXTDKTLELISGLTGLVSLNVS 356
L+ L++ LT + I KD + + E +S LT L +L++S
Sbjct: 625 LSLLKKLDLSHNSLTGSIPDQISKDSSLESLLLNSNSL--SGRIPESLSRLTNLTALDLS 682
Query: 357 NSRITSAGLRHLKPLKNLRSLTL 379
++R+ S L L+ L L
Sbjct: 683 SNRLNSTIPSSLSRLRFLNYFNL 705
>ZFIN|ZDB-GENE-060421-8264 [details] [associations]
symbol:zgc:136791 "zgc:136791" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-060421-8264 InterPro:IPR007111
PROSITE:PS50837 eggNOG:NOG82860 OrthoDB:EOG4HX508
GeneTree:ENSGT00690000101934 EMBL:AL929041 IPI:IPI00758745
UniGene:Dr.113712 UniGene:Dr.84346 ProteinModelPortal:A5PF24
Ensembl:ENSDART00000144759 HOVERGEN:HBG092009 OMA:PHCKLEK
ArrayExpress:A5PF24 Bgee:A5PF24 Uniprot:A5PF24
Length = 938
Score = 152 (58.6 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 68/231 (29%), Positives = 113/231 (48%)
Query: 59 KLESLNIKWCNCITD---SDMKPL--SGLTNLKSLQISCS-KVTDSGIAYXXXXXXXXXX 112
KLE L ++ C ++D +D+ + S +NL+ L++S + V DSG+
Sbjct: 693 KLEKLRLRCCG-VSDEGCADLASVLRSNSSNLRELELSKNINVGDSGVKL---------- 741
Query: 113 XXEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKI-----GSLKVLNLGFNEI 167
++A D L L L C +SD+GC + + +L+ L+L N+I
Sbjct: 742 ------LSAGLKDPHCKLEKL---RLGYCGVSDEGCAALASVLRSNSSNLRELDLSDNKI 792
Query: 168 TDECLVHLK-GLTN----LESLNLDSCGIGDEGLVNLTGLC-----NLKCLELSDTQVGS 217
D + L GL + LE+L L +C + +G L NL+ L LS+ +VG
Sbjct: 793 VDSGVKRLSAGLKDPQCKLETLRLINCDVSGKGCAALASALRSNSSNLRELNLSENKVGD 852
Query: 218 SGLRHLS-GLTN----LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 263
SG++ LS GL + LE + L++ G+SD S LA S+L+S + + R++
Sbjct: 853 SGVKRLSAGLKDPHCKLEKLTLNYCGVSDASCADLA--SALRSNSSNLREL 901
Score = 139 (54.0 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 49/139 (35%), Positives = 69/139 (49%)
Query: 141 CQLSDDGCEKF-----SKIGSLKVLNLGFNEITDECLVHLK-GLTN----LESLNLDSCG 190
C +SD GC S +L+ L+L +N + D + L GL + LE L L CG
Sbjct: 644 CGISDKGCAALASALRSNSSNLRELDLSYNIVGDSGVKLLSAGLKDPHCKLEKLRLRCCG 703
Query: 191 IGDEGLVNLTGLC-----NLKCLELS-DTQVGSSGLRHLS-GLTN----LESINLSFTGI 239
+ DEG +L + NL+ LELS + VG SG++ LS GL + LE + L + G+
Sbjct: 704 VSDEGCADLASVLRSNSSNLRELELSKNINVGDSGVKLLSAGLKDPHCKLEKLRLGYCGV 763
Query: 240 SDGSLRKLAGLSSLKSLNL 258
SD LA + S NL
Sbjct: 764 SDEGCAALASVLRSNSSNL 782
>UNIPROTKB|Q58DG6 [details] [associations]
symbol:FBXL20 "F-box/LRR-repeat protein 20" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0005737
SUPFAM:SSF81383 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 eggNOG:NOG300245 KO:K10268 HOGENOM:HOG000230659
HOVERGEN:HBG051586 OrthoDB:EOG4KPTB9 EMBL:BT021631 EMBL:BC133345
IPI:IPI00718197 IPI:IPI00884875 RefSeq:NP_001030268.1
UniGene:Bt.20361 ProteinModelPortal:Q58DG6 SMR:Q58DG6 PRIDE:Q58DG6
Ensembl:ENSBTAT00000011020 GeneID:511007 KEGG:bta:511007 CTD:84961
OMA:CAHDRLE NextBio:20869722 Uniprot:Q58DG6
Length = 436
Score = 141 (54.7 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 60/186 (32%), Positives = 88/186 (47%)
Query: 36 LVKLDLERCTRIHG-GLVNL-KGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS- 91
LV L+L+ C +I GL+ + +G KL+SL C+ ITD+ + L L+ L+++
Sbjct: 223 LVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVAR 282
Query: 92 CSKVTDSGIAYXXXX-XXXXXXXXEGC-PVTAACLDSLSA-LGSLFYLNLNRCQL-SDDG 147
CS++TD G E C +T + L LS L L+L+ C+L +DDG
Sbjct: 283 CSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDG 342
Query: 148 CEKFSKIG----SLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNL-T 200
L+V+ L ITD L HLK +LE + L C I G+ L T
Sbjct: 343 IRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRT 402
Query: 201 GLCNLK 206
L N+K
Sbjct: 403 HLPNIK 408
Score = 116 (45.9 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 55/203 (27%), Positives = 91/203 (44%)
Query: 39 LDLERCTRIHGGLVNLKGLMK----LESLNIKWCNCITDSDMKPL-SGLTNLKSLQIS-C 92
LDL CT I ++LK L + LE LNI WC+ +T ++ L G LK+L + C
Sbjct: 148 LDLASCTSITN--MSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGC 205
Query: 93 SKVTDSGIAYXXXXX-XXXXXXXEGC-PVTAACLDSLS-ALGSLFYLNLNRCQLSDDGCE 149
+++ D + Y + C +T L ++ L L + C D
Sbjct: 206 TQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAI- 264
Query: 150 KFSKIGS----LKVLNLG-FNEITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLTGL 202
+ +G L++L + +++TD L + LE ++L+ C I D L+ L+
Sbjct: 265 -LNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIH 323
Query: 203 C-NLKCLELSDTQ-VGSSGLRHL 223
C L+ L LS + + G+RHL
Sbjct: 324 CPRLQVLSLSHCELITDDGIRHL 346
Score = 107 (42.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 61/229 (26%), Positives = 99/229 (43%)
Query: 36 LVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGL-TNLKSLQI-S 91
L KL L C + + + +E LN+ C TD+ LS + L+ L + S
Sbjct: 93 LRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLAS 152
Query: 92 CSKVTDSGI-AYXXXXXXXXXXXXEGCP-VTAACLDSL-SALGSLFYLNLNRC-QLSDDG 147
C+ +T+ + A C VT + +L G L L L C QL D+
Sbjct: 153 CTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEA 212
Query: 148 CEKF-SKIGSLKVLNLGFN-EITDECLVHL-KGLTNLESLNLDSCGIGDEGLVNLTGL-C 203
+ + L LNL +ITDE L+ + +G L+SL C + ++N G C
Sbjct: 213 LKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNC 272
Query: 204 -NLKCLELSD-TQVGSSGLRHLS-GLTNLESINLS-FTGISDGSLRKLA 248
L+ LE++ +Q+ G L+ LE ++L I+D +L +L+
Sbjct: 273 PRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLS 321
Score = 73 (30.8 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 360 ITSAGLRHLKPLKNLRSLTLESCK-VTANDIKRLQSRDLPNL 400
IT A L HLK +L + L C+ +T IKRL++ LPN+
Sbjct: 367 ITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTH-LPNI 407
>UNIPROTKB|Q96IG2 [details] [associations]
symbol:FBXL20 "F-box/LRR-repeat protein 20" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0005737
SUPFAM:SSF81383 InterPro:IPR006553 SMART:SM00367 eggNOG:NOG300245
KO:K10268 HOGENOM:HOG000230659 HOVERGEN:HBG051586 OrthoDB:EOG4KPTB9
CTD:84961 OMA:CAHDRLE EMBL:DQ223959 EMBL:AK291844 EMBL:BC007557
IPI:IPI00174757 IPI:IPI00655936 RefSeq:NP_001171835.1
RefSeq:NP_116264.2 UniGene:Hs.462946 ProteinModelPortal:Q96IG2
SMR:Q96IG2 STRING:Q96IG2 PhosphoSite:Q96IG2 DMDM:38503141
PaxDb:Q96IG2 PRIDE:Q96IG2 DNASU:84961 Ensembl:ENST00000264658
Ensembl:ENST00000394294 Ensembl:ENST00000583610 GeneID:84961
KEGG:hsa:84961 UCSC:uc002hrt.3 UCSC:uc010cvu.3
GeneCards:GC17M037409 HGNC:HGNC:24679 MIM:609086 neXtProt:NX_Q96IG2
PharmGKB:PA134976410 InParanoid:Q96IG2 PhylomeDB:Q96IG2
GenomeRNAi:84961 NextBio:75475 Bgee:Q96IG2 CleanEx:HS_FBXL20
Genevestigator:Q96IG2 GermOnline:ENSG00000108306 Uniprot:Q96IG2
Length = 436
Score = 141 (54.7 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 60/186 (32%), Positives = 88/186 (47%)
Query: 36 LVKLDLERCTRIHG-GLVNL-KGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS- 91
LV L+L+ C +I GL+ + +G KL+SL C+ ITD+ + L L+ L+++
Sbjct: 223 LVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVAR 282
Query: 92 CSKVTDSGIAYXXXX-XXXXXXXXEGC-PVTAACLDSLSA-LGSLFYLNLNRCQL-SDDG 147
CS++TD G E C +T + L LS L L+L+ C+L +DDG
Sbjct: 283 CSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDG 342
Query: 148 CEKFSKIG----SLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNL-T 200
L+V+ L ITD L HLK +LE + L C I G+ L T
Sbjct: 343 IRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRT 402
Query: 201 GLCNLK 206
L N+K
Sbjct: 403 HLPNIK 408
Score = 116 (45.9 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 55/203 (27%), Positives = 91/203 (44%)
Query: 39 LDLERCTRIHGGLVNLKGLMK----LESLNIKWCNCITDSDMKPL-SGLTNLKSLQIS-C 92
LDL CT I ++LK L + LE LNI WC+ +T ++ L G LK+L + C
Sbjct: 148 LDLASCTSITN--MSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGC 205
Query: 93 SKVTDSGIAYXXXXX-XXXXXXXEGC-PVTAACLDSLS-ALGSLFYLNLNRCQLSDDGCE 149
+++ D + Y + C +T L ++ L L + C D
Sbjct: 206 TQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAI- 264
Query: 150 KFSKIGS----LKVLNLG-FNEITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLTGL 202
+ +G L++L + +++TD L + LE ++L+ C I D L+ L+
Sbjct: 265 -LNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIH 323
Query: 203 C-NLKCLELSDTQ-VGSSGLRHL 223
C L+ L LS + + G+RHL
Sbjct: 324 CPRLQVLSLSHCELITDDGIRHL 346
Score = 107 (42.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 61/229 (26%), Positives = 99/229 (43%)
Query: 36 LVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGL-TNLKSLQI-S 91
L KL L C + + + +E LN+ C TD+ LS + L+ L + S
Sbjct: 93 LRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLAS 152
Query: 92 CSKVTDSGI-AYXXXXXXXXXXXXEGCP-VTAACLDSL-SALGSLFYLNLNRC-QLSDDG 147
C+ +T+ + A C VT + +L G L L L C QL D+
Sbjct: 153 CTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEA 212
Query: 148 CEKF-SKIGSLKVLNLGFN-EITDECLVHL-KGLTNLESLNLDSCGIGDEGLVNLTGL-C 203
+ + L LNL +ITDE L+ + +G L+SL C + ++N G C
Sbjct: 213 LKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNC 272
Query: 204 -NLKCLELSD-TQVGSSGLRHLS-GLTNLESINLS-FTGISDGSLRKLA 248
L+ LE++ +Q+ G L+ LE ++L I+D +L +L+
Sbjct: 273 PRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLS 321
Score = 73 (30.8 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 360 ITSAGLRHLKPLKNLRSLTLESCK-VTANDIKRLQSRDLPNL 400
IT A L HLK +L + L C+ +T IKRL++ LPN+
Sbjct: 367 ITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTH-LPNI 407
>MGI|MGI:1919444 [details] [associations]
symbol:Fbxl20 "F-box and leucine-rich repeat protein 20"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 MGI:MGI:1919444 GO:GO:0005737
SUPFAM:SSF81383 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 EMBL:AL591209 EMBL:AL591205 eggNOG:NOG300245
KO:K10268 HOGENOM:HOG000230659 HOVERGEN:HBG051586 OrthoDB:EOG4KPTB9
CTD:84961 OMA:CAHDRLE EMBL:EF649694 EMBL:AK012109 EMBL:AK036217
EMBL:AK144786 EMBL:AK220232 IPI:IPI00605645 IPI:IPI00874641
IPI:IPI00954305 RefSeq:NP_082425.1 UniGene:Mm.218350
ProteinModelPortal:Q9CZV8 SMR:Q9CZV8 IntAct:Q9CZV8 STRING:Q9CZV8
PhosphoSite:Q9CZV8 PaxDb:Q9CZV8 PRIDE:Q9CZV8
Ensembl:ENSMUST00000103143 GeneID:72194 KEGG:mmu:72194
UCSC:uc007lfm.1 UCSC:uc009vah.1 InParanoid:Q9CZV8 NextBio:335667
Bgee:Q9CZV8 CleanEx:MM_FBXL20 Genevestigator:Q9CZV8
GermOnline:ENSMUSG00000020883 Uniprot:Q9CZV8
Length = 436
Score = 141 (54.7 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 60/186 (32%), Positives = 88/186 (47%)
Query: 36 LVKLDLERCTRIHG-GLVNL-KGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS- 91
LV L+L+ C +I GL+ + +G KL+SL C+ ITD+ + L L+ L+++
Sbjct: 223 LVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVAR 282
Query: 92 CSKVTDSGIAYXXXX-XXXXXXXXEGC-PVTAACLDSLSA-LGSLFYLNLNRCQL-SDDG 147
CS++TD G E C +T + L LS L L+L+ C+L +DDG
Sbjct: 283 CSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDG 342
Query: 148 CEKFSKIG----SLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNL-T 200
L+V+ L ITD L HLK +LE + L C I G+ L T
Sbjct: 343 IRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRT 402
Query: 201 GLCNLK 206
L N+K
Sbjct: 403 HLPNIK 408
Score = 116 (45.9 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 55/203 (27%), Positives = 91/203 (44%)
Query: 39 LDLERCTRIHGGLVNLKGLMK----LESLNIKWCNCITDSDMKPL-SGLTNLKSLQIS-C 92
LDL CT I ++LK L + LE LNI WC+ +T ++ L G LK+L + C
Sbjct: 148 LDLASCTSITN--MSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGC 205
Query: 93 SKVTDSGIAYXXXXX-XXXXXXXEGC-PVTAACLDSLS-ALGSLFYLNLNRCQLSDDGCE 149
+++ D + Y + C +T L ++ L L + C D
Sbjct: 206 TQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAI- 264
Query: 150 KFSKIGS----LKVLNLG-FNEITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLTGL 202
+ +G L++L + +++TD L + LE ++L+ C I D L+ L+
Sbjct: 265 -LNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIH 323
Query: 203 C-NLKCLELSDTQ-VGSSGLRHL 223
C L+ L LS + + G+RHL
Sbjct: 324 CPRLQVLSLSHCELITDDGIRHL 346
Score = 73 (30.8 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 360 ITSAGLRHLKPLKNLRSLTLESCK-VTANDIKRLQSRDLPNL 400
IT A L HLK +L + L C+ +T IKRL++ LPN+
Sbjct: 367 ITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTH-LPNI 407
>RGD|1562655 [details] [associations]
symbol:Tlr13 "toll-like receptor 13" species:10116 "Rattus
norvegicus" [GO:0002237 "response to molecule of bacterial origin"
evidence=IEA] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA;ISO] [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005768 "endosome" evidence=ISO] [GO:0009615
"response to virus" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA;ISO] [GO:0034178 "toll-like receptor 13 signaling
pathway" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043408 "regulation of MAPK cascade"
evidence=ISO] [GO:0045087 "innate immune response"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027196 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 RGD:1562655 GO:GO:0007165
InterPro:IPR003591 SMART:SM00369 GO:GO:0005622 SUPFAM:SSF52200
PANTHER:PTHR24367:SF26 IPI:IPI00362009 Ensembl:ENSRNOT00000038868
Uniprot:F1LYZ1
Length = 987
Score = 149 (57.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 72/256 (28%), Positives = 104/256 (40%)
Query: 16 FRRNNAITAQGMKAFAGLINLVKLDL-ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDS 74
F NA A+G+K A L+ LDL + +H L L+ LN+ C S
Sbjct: 349 FFHKNATNAEGIKQLAKCTRLLFLDLGQNSDLVHLNDSEFNALPSLQRLNLNKCQLSFIS 408
Query: 75 DMKPLSGLTNLKSLQISCSKVTD-SGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSL 133
+ K S L NL L +S +K A+ P+T + S L SL
Sbjct: 409 N-KTWSSLQNLTILDLSHNKFKSFPDFAFSPLKRLEFLSLSRN-PITELNNLAFSGLFSL 466
Query: 134 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH--LKGLTNLESLNLDSCGI 191
LNL C + F++ +L+VL+LG N I L H + L L +L L +
Sbjct: 467 KELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNI--RTLNHGTFQPLKKLHTLILSHNRL 524
Query: 192 GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA--- 248
+GL L+ L+L + H GL L + L F I+ + R L
Sbjct: 525 EIMESNAFSGLTGLRYLDLMYNSLSYFHKHHFMGLEKLLVLKLGFNKITYETTRTLQYPP 584
Query: 249 --GLSSLKSLNLDARQ 262
L SLK LNL+ ++
Sbjct: 585 FMKLKSLKQLNLEGQK 600
>TAIR|locus:2040105 [details] [associations]
symbol:EBF1 "AT2G25490" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=RCA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009723 "response to ethylene stimulus" evidence=IMP]
[GO:0010105 "negative regulation of ethylene mediated signaling
pathway" evidence=TAS] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009873 GO:GO:0009723
SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0006511 GO:GO:0010105
InterPro:IPR006553 SMART:SM00367 EMBL:AC006300 EMBL:AJ609238
EMBL:AY072205 EMBL:AY091333 EMBL:AK317560 EMBL:AK229995
IPI:IPI00530647 PIR:A84649 RefSeq:NP_565597.1 UniGene:At.24288
UniGene:At.67740 ProteinModelPortal:Q9SKK0 SMR:Q9SKK0 IntAct:Q9SKK0
STRING:Q9SKK0 PRIDE:Q9SKK0 EnsemblPlants:AT2G25490.1 GeneID:817087
KEGG:ath:AT2G25490 TAIR:At2g25490 eggNOG:NOG300245
HOGENOM:HOG000238885 InParanoid:Q9SKK0 KO:K14515 OMA:KCAISDS
PhylomeDB:Q9SKK0 ProtClustDB:CLSN2686700 Genevestigator:Q9SKK0
Uniprot:Q9SKK0
Length = 628
Score = 144 (55.7 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 69/261 (26%), Positives = 118/261 (45%)
Query: 22 ITAQGMKAFA-GLINLVKLDLERCTRIH-GGLVNL-KGLMKLESLNIKWCNCITDSDMKP 78
+T G+++ G N+ K + + + GLV+ K + LESL ++ C+ +T
Sbjct: 348 VTDMGLESVGKGCPNMKKAIISKSPLLSDNGLVSFAKASLSLESLQLEECHRVTQFGF-- 405
Query: 79 LSGLTN----LKSLQ-ISCSKVTD--SGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALG 131
L N LK+ ++C + D +G+ CP +L+A+G
Sbjct: 406 FGSLLNCGEKLKAFSLVNCLSIRDLTTGLPASSHCSALRSLSIRNCPGFGDA--NLAAIG 463
Query: 132 SLF-YL-NLNRCQL---SDDGCEKFSKIGSLKVLNLGFNEITDECLVHL---KGLTNLES 183
L L +++ C L ++ G + +K+ G + +TD + + G T LE
Sbjct: 464 KLCPQLEDIDLCGLKGITESGFLHLIQSSLVKINFSGCSNLTDRVISAITARNGWT-LEV 522
Query: 184 LNLDSCG-IGDEGLVNLTGLCN-LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG--- 238
LN+D C I D LV++ C L L++S + SG++ L+ L+ LS G
Sbjct: 523 LNIDGCSNITDASLVSIAANCQILSDLDISKCAISDSGIQALASSDKLKLQILSVAGCSM 582
Query: 239 ISDGSLRKLAGL-SSLKSLNL 258
++D SL + GL S+L LNL
Sbjct: 583 VTDKSLPAIVGLGSTLLGLNL 603
Score = 137 (53.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 104/404 (25%), Positives = 166/404 (41%)
Query: 20 NAITAQGMKAFA-GLINLVKLDLERCTRIHG-GLVNL-KGLMKLESLNIKWCNCITDSDM 76
+ IT G+ A G L KL+L RC+ I GLV + K L L ++ C+ I D +
Sbjct: 188 STITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCPNLTELTLEACSRIGDEGL 247
Query: 77 KPLS-GLTNLKSLQI-SCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLF 134
++ + LKS+ I +C V D GIA C SL+ L L
Sbjct: 248 LAIARSCSKLKSVSIKNCPLVRDQGIASLLS--------------NTTC--SLAKL-KLQ 290
Query: 135 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE---CLVHLKGLTNLESLNLDSC-G 190
LN+ L+ G S I L VL G + ++++ + + GL L SL + +C G
Sbjct: 291 MLNVTDVSLAVVGHYGLS-ITDL-VL-AGLSHVSEKGFWVMGNGVGLQKLNSLTITACQG 347
Query: 191 IGDEGLVNLTGLC-NLKCLELSDTQVGS-SGLRHLSGLT-NLESINLS----FTGISD-G 242
+ D GL ++ C N+K +S + + S +GL + + +LES+ L T G
Sbjct: 348 VTDMGLESVGKGCPNMKKAIISKSPLLSDNGLVSFAKASLSLESLQLEECHRVTQFGFFG 407
Query: 243 SL----RKLAGLSSLKSLNLDARQIXXXXXXXXXXXXXXXXXDLFGARITDSGAAYLRNF 298
SL KL S + L++ R + D+ A +
Sbjct: 408 SLLNCGEKLKAFSLVNCLSI--RDLTTGLPASSHCSALRSLSIRNCPGFGDANLAAIGKL 465
Query: 299 -KNLRSLEICG-GGLTDAGVKHIKDXXXXXXXXXXXXXXXTDKTLELISGLTG--LVSLN 354
L +++CG G+T++G H+ TD+ + I+ G L LN
Sbjct: 466 CPQLEDIDLCGLKGITESGFLHLIQSSLVKINFSGCSNL-TDRVISAITARNGWTLEVLN 524
Query: 355 VSN-SRITSAGLRHLKP-LKNLRSLTLESCKVTANDIKRLQSRD 396
+ S IT A L + + L L + C ++ + I+ L S D
Sbjct: 525 IDGCSNITDASLVSIAANCQILSDLDISKCAISDSGIQALASSD 568
Score = 117 (46.2 bits), Expect = 0.00079, P = 0.00079
Identities = 98/395 (24%), Positives = 162/395 (41%)
Query: 18 RNNAITAQGMKAFA-GLINLVKLDLERCTRI--HGGLVNLKGLMKLESLNIKWCNCITDS 74
R + IT +G+ A A NL +L LE C+RI G L + KL+S++IK C + D
Sbjct: 212 RCSTITDKGLVAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSIKNCPLVRDQ 271
Query: 75 DMKPL-SGLT-NLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGS 132
+ L S T +L L++ VTD +A G +T L LS +
Sbjct: 272 GIASLLSNTTCSLAKLKLQMLNVTDVSLAVVGHY---------GLSITDLVLAGLSHVSE 322
Query: 133 L-FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-KGLTNLESLNLDSCG 190
F++ N L K+ SL + +TD L + KG N++ +
Sbjct: 323 KGFWVMGNGVGLQ--------KLNSLTIT--ACQGVTDMGLESVGKGCPNMKKAIISKSP 372
Query: 191 I-GDEGLVNLT-GLCNLKCLELSD----TQVGSSGLRHLSG--LTNLESIN-LSFTGISD 241
+ D GLV+ +L+ L+L + TQ G G G L +N LS ++
Sbjct: 373 LLSDNGLVSFAKASLSLESLQLEECHRVTQFGFFGSLLNCGEKLKAFSLVNCLSIRDLTT 432
Query: 242 GSLRKLAGLSSLKSLNL-DARQIXXXXXXXXXXXX-XXXXXDLFGAR-ITDSGAAYLRNF 298
G L + S+L+SL++ + DL G + IT+SG +L
Sbjct: 433 G-LPASSHCSALRSLSIRNCPGFGDANLAAIGKLCPQLEDIDLCGLKGITESGFLHLIQ- 490
Query: 299 KNLRSLEICG-GGLTDAGVKHI--KDXXXXXXXXXXXXXXXTDKTLELISGLTGLVS-LN 354
+L + G LTD + I ++ TD +L I+ ++S L+
Sbjct: 491 SSLVKINFSGCSNLTDRVISAITARNGWTLEVLNIDGCSNITDASLVSIAANCQILSDLD 550
Query: 355 VSNSRITSAGLRHLKPLKNLRS--LTLESCKVTAN 387
+S I+ +G++ L L+ L++ C + +
Sbjct: 551 ISKCAISDSGIQALASSDKLKLQILSVAGCSMVTD 585
>MGI|MGI:107935 [details] [associations]
symbol:Lrig1 "leucine-rich repeats and immunoglobulin-like
domains 1" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:107935 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 Pfam:PF01463 CTD:26018
HOGENOM:HOG000113380 HOVERGEN:HBG052353 OMA:ESNGVCP
OrthoDB:EOG48PMJN ChiTaRS:LRIG1 EMBL:D78572 EMBL:AC122272
EMBL:AC155330 IPI:IPI00136475 PIR:A58532 RefSeq:NP_032403.2
UniGene:Mm.245210 ProteinModelPortal:P70193 SMR:P70193
STRING:P70193 PhosphoSite:P70193 PaxDb:P70193 PRIDE:P70193
Ensembl:ENSMUST00000032105 Ensembl:ENSMUST00000101126 GeneID:16206
KEGG:mmu:16206 UCSC:uc009czu.1 InParanoid:P70193 NextBio:289161
Bgee:P70193 Genevestigator:P70193 GermOnline:ENSMUSG00000030029
Uniprot:P70193
Length = 1091
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 71/247 (28%), Positives = 105/247 (42%)
Query: 20 NAITAQGMKAFAGLINLVKLDLERCT-RIHGGLVNLKGLMKLESLNIKWCNC--ITDSDM 76
N IT +KAF L L +LDL R R+ GL +GL LE L ++ N +TD
Sbjct: 200 NRITQLPVKAFK-LPRLTQLDLNRNRIRLIEGLT-FQGLDSLEVLRLQRNNISRLTDGAF 257
Query: 77 KPLSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYL 136
LS + ++ L+ + +SG Y ++ D S L L
Sbjct: 258 WGLSKM-HVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNS--ISRIQRDGWSFCQKLHEL 314
Query: 137 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS---CGIGD 193
L+ L+ E +++ SL +L L N I+ KGL +L L+LD G +
Sbjct: 315 ILSFNNLTRLDEESLAELSSLSILRLSHNAISHIAEGAFKGLKSLRVLDLDHNEISGTIE 374
Query: 194 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 253
+ TGL NL L L ++ S R SGL +LE +NL I A + +L
Sbjct: 375 DTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSGLESLEHLNLGENAIRSVQFDAFAKMKNL 434
Query: 254 KSLNLDA 260
K L + +
Sbjct: 435 KELYISS 441
>TAIR|locus:2076376 [details] [associations]
symbol:AT3G58530 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] PROSITE:PS50181 GO:GO:0005829 EMBL:CP002686
GenomeReviews:BA000014_GR InterPro:IPR006553 SMART:SM00367
EMBL:AL137082 KO:K10268 EMBL:AY054560 EMBL:AY064636 EMBL:AY087448
IPI:IPI00540412 PIR:T45673 RefSeq:NP_567069.1 UniGene:At.20154
ProteinModelPortal:Q8LB33 SMR:Q8LB33 PaxDb:Q8LB33 PRIDE:Q8LB33
EnsemblPlants:AT3G58530.1 GeneID:825022 KEGG:ath:AT3G58530
TAIR:At3g58530 eggNOG:NOG315617 HOGENOM:HOG000030245
InParanoid:Q8LB33 OMA:NLTWCVR PhylomeDB:Q8LB33
ProtClustDB:CLSN2689223 Genevestigator:Q8LB33 Uniprot:Q8LB33
Length = 353
Score = 137 (53.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 63/212 (29%), Positives = 107/212 (50%)
Query: 119 VTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKI-GSLKVLNLGFN-EITDECLVHL 175
V C D AL SL +LNLN CQ +SD+G E + I LKV ++ +N +TD + +L
Sbjct: 102 VKTECPD---ALLSLEWLNLNVCQKISDNGIEAITSICPKLKVFSIYWNVRVTDAGIRNL 158
Query: 176 -KGLTNLESLNLDSC-GIGDEG--LV-----NLTGLCNLKCLELSDTQVGSSGLRHLSGL 226
K ++ LNL C + D+ LV +L L +C++++D + L+ L
Sbjct: 159 VKNCRHITDLNLSGCKSLTDKSMQLVAESYPDLESLNITRCVKITDDGL----LQVLQKC 214
Query: 227 TNLESINL-SFTGISDGSLRKLAGLSSLKSLNL-DARQIXXXXXXXXXXXXXXXXXDL-F 283
+L+++NL + +G +D + K++ L+ L+ L++ A+ I +L +
Sbjct: 215 FSLQTLNLYALSGFTDKAYMKISLLADLRFLDICGAQNISDEGIGHIAKCNKLESLNLTW 274
Query: 284 GARITDSGAAYLRNF-KNLRSLEICG-GGLTD 313
RITD+G + N +L L + G G+TD
Sbjct: 275 CVRITDAGVNTIANSCTSLEFLSLFGIVGVTD 306
Score = 117 (46.2 bits), Expect = 0.00033, P = 0.00033
Identities = 64/231 (27%), Positives = 102/231 (44%)
Query: 33 LINLVKLDLERCTRIH-GGLVNLKGLM-KLESLNIKWCNCITDSDMKPL-SGLTNLKSLQ 89
L++L L+L C +I G+ + + KL+ +I W +TD+ ++ L ++ L
Sbjct: 110 LLSLEWLNLNVCQKISDNGIEAITSICPKLKVFSIYWNVRVTDAGIRNLVKNCRHITDLN 169
Query: 90 IS-CSKVTDSGIAYXXXXX-XXXXXXXEGC-PVTA-ACLDSLSALGSLFYLNLNRCQ-LS 144
+S C +TD + C +T L L SL LNL +
Sbjct: 170 LSGCKSLTDKSMQLVAESYPDLESLNITRCVKITDDGLLQVLQKCFSLQTLNLYALSGFT 229
Query: 145 DDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGL 202
D K S + L+ L++ G I+DE + H+ LESLNL C I D G+ +
Sbjct: 230 DKAYMKISLLADLRFLDICGAQNISDEGIGHIAKCNKLESLNLTWCVRITDAGVNTIANS 289
Query: 203 C-NLKCLELSDTQVGSSG--LRHLSGL--TNLESINLS-FTGISDGSLRKL 247
C +L+ L L VG + L LS T L +++++ TGI S +L
Sbjct: 290 CTSLEFLSLFGI-VGVTDRCLETLSQTCSTTLTTLDVNGCTGIKRRSREEL 339
>UNIPROTKB|F1NHD2 [details] [associations]
symbol:FBXL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0016020
GO:GO:0006511 GO:GO:0004842 GeneTree:ENSGT00700000104023
InterPro:IPR006553 SMART:SM00367 GO:GO:0006513 OMA:LTENVFG
EMBL:AADN02001289 IPI:IPI00581819 Ensembl:ENSGALT00000019534
Uniprot:F1NHD2
Length = 423
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 57/168 (33%), Positives = 83/168 (49%)
Query: 36 LVKLDLERCTRIHG-GLVNL-KGLMKLESLNIKWCNCITDSDMKPLSGLT--NLKSLQIS 91
L L+L+ CT+I G+V + +G +L+SL + C +TD+ + L GL LK L+ +
Sbjct: 210 LAILNLQSCTQISDEGIVKICRGCHRLQSLCVSGCCNLTDASLTAL-GLNCPRLKILEAA 268
Query: 92 -CSKVTDSGIAYXXXX-XXXXXXXXEGCP-VTAACLDSLSA-LGSLFYLNLNRCQL-SDD 146
CS++TD+G E C +T + L LS L L+L+ C+L +DD
Sbjct: 269 RCSQLTDAGFTLLARNCHELEKMDLEECVLITDSTLIQLSIHCPKLQALSLSHCELITDD 328
Query: 147 GCEKFSK--IGS--LKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC 189
G S G L+VL L ITD L HL+ NLE + L C
Sbjct: 329 GILHLSNSTCGHERLQVLELDNCLLITDVTLEHLENCHNLERIELYDC 376
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 56/209 (26%), Positives = 87/209 (41%)
Query: 36 LVKLDLERCTRI-HGGLVNL-KGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQI-S 91
L LDL C I + L L +G LE LN+ WC+ IT ++ L G + LK+L +
Sbjct: 132 LKHLDLTSCVAITNSSLKGLSEGCRNLEHLNLSWCDQITKDGIEALVKGCSGLKALFLRG 191
Query: 92 CSKVTDSGIAYXXXX-XXXXXXXXEGCP------VTAACLDSLSALGSLFYLNLNRCQLS 144
C+++ D + + + C + C L SL C L+
Sbjct: 192 CTQLEDEALKHIQNHCHELAILNLQSCTQISDEGIVKICR-GCHRLQSLCVSGC--CNLT 248
Query: 145 DDGCEKFS-KIGSLKVLNLG-FNEITDECLVHL-KGLTNLESLNLDSCG-IGDEGLVNLT 200
D LK+L +++TD L + LE ++L+ C I D L+ L+
Sbjct: 249 DASLTALGLNCPRLKILEAARCSQLTDAGFTLLARNCHELEKMDLEECVLITDSTLIQLS 308
Query: 201 GLC-NLKCLELSDTQ-VGSSGLRHLSGLT 227
C L+ L LS + + G+ HLS T
Sbjct: 309 IHCPKLQALSLSHCELITDDGILHLSNST 337
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 63/215 (29%), Positives = 99/215 (46%)
Query: 60 LESLNIKWCNCITDSDMKPLSGL-TNLKSLQI-SCSKVTDSGI-AYXXXXXXXXXXXXEG 116
+E LN+ C ITDS LS + LK L + SC +T+S +
Sbjct: 106 IEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVAITNSSLKGLSEGCRNLEHLNLSW 165
Query: 117 CP-VTAACLDSL-SALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLNL-GFNEITDEC 171
C +T +++L L L L C QL D+ + L +LNL +I+DE
Sbjct: 166 CDQITKDGIEALVKGCSGLKALFLRGCTQLEDEALKHIQNHCHELAILNLQSCTQISDEG 225
Query: 172 LVHL-KGLTNLESLNLDSC-GIGDEGLVNLTGL-C-NLKCLELSD-TQVGSSGLRHLS-G 225
+V + +G L+SL + C + D L L GL C LK LE + +Q+ +G L+
Sbjct: 226 IVKICRGCHRLQSLCVSGCCNLTDASLTAL-GLNCPRLKILEAARCSQLTDAGFTLLARN 284
Query: 226 LTNLESINLS-FTGISDGSLRKLA-GLSSLKSLNL 258
LE ++L I+D +L +L+ L++L+L
Sbjct: 285 CHELEKMDLEECVLITDSTLIQLSIHCPKLQALSL 319
>MGI|MGI:3045213 [details] [associations]
symbol:Tlr13 "toll-like receptor 13" species:10090 "Mus
musculus" [GO:0002755 "MyD88-dependent toll-like receptor signaling
pathway" evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IDA] [GO:0034178 "toll-like receptor 13 signaling pathway"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0043408 "regulation of MAPK cascade"
evidence=IGI] [GO:0045087 "innate immune response" evidence=IDA]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027196 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 MGI:MGI:3045213 GO:GO:0016021 GO:GO:0042803
GO:GO:0005768 GO:GO:0006954 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0045087 GO:GO:0010008 GO:GO:0009615
GO:GO:0019843 GO:GO:0002755 EMBL:AL672288 GO:GO:0043408
EMBL:CH466564 SUPFAM:SSF52200 EMBL:AY510706 EMBL:AK170044
EMBL:BC117913 EMBL:BC117914 IPI:IPI00342691 RefSeq:NP_991389.1
UniGene:Mm.336203 ProteinModelPortal:Q6R5N8 SMR:Q6R5N8
STRING:Q6R5N8 PhosphoSite:Q6R5N8 PRIDE:Q6R5N8
Ensembl:ENSMUST00000040065 GeneID:279572 KEGG:mmu:279572 CTD:279572
GeneTree:ENSGT00680000099674 HOGENOM:HOG000203220
HOVERGEN:HBG094977 InParanoid:Q6R5N8 OrthoDB:EOG4XGZZS
NextBio:393989 Bgee:Q6R5N8 CleanEx:MM_TLR13 Genevestigator:Q6R5N8
GermOnline:ENSMUSG00000033777 GO:GO:0034178 PANTHER:PTHR24367:SF26
Uniprot:Q6R5N8
Length = 991
Score = 148 (57.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 75/257 (29%), Positives = 114/257 (44%)
Query: 18 RNNAITAQGMKAFAGLINLVKLDL-ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 76
+ N A+G+K A L+ LDL + I+ L L+ LN+ C ++ +
Sbjct: 355 QKNVTNAEGIKQLAKCTRLLFLDLGQNSDLIYLNDSEFNALPSLQKLNLNKCQ-LSFINN 413
Query: 77 KPLSGLTNLKSLQISCSKVTD-SGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFY 135
+ S L NL SL +S +K A+ P+T + S L +L
Sbjct: 414 RTWSSLQNLTSLDLSHNKFKSFPDFAFSPLKHLEFLSLSRN-PITELNNLAFSGLFALKE 472
Query: 136 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH--LKGLTNLESLNLD-SC-GI 191
LNL C + F++ +L+VL+LG N I L H + L L+SL L +C I
Sbjct: 473 LNLAACWIVTIDRYSFTQFPNLEVLDLGDNNI--RTLNHGTFRPLKKLQSLILSHNCLKI 530
Query: 192 GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL-SGLTNLESINLSFTGISDGSLRKLA-- 248
+ + +GL NL+ L+L + S HL SGL L + L F I+ + R L
Sbjct: 531 LEPN--SFSGLTNLRSLDLMYNSL-SYFHEHLFSGLEKLLILKLGFNKITYETTRTLQYP 587
Query: 249 ---GLSSLKSLNLDARQ 262
L SLK LNL+ ++
Sbjct: 588 PFIKLKSLKQLNLEGQR 604
Score = 39 (18.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 348 TGLVSLNVSNSRITSAGLRHLKPLKNLRSL 377
+ L SL V + R + + + LKNL+SL
Sbjct: 692 SSLQSLQVFSLRFNNLKVINQSHLKNLKSL 721
Score = 37 (18.1 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 342 ELISGLTGL--VSLNVSNSRITSAGLRHLKPLKNL 374
++ S L L SL +N ++ + HLK LK+L
Sbjct: 689 DMFSSLQSLQVFSLRFNNLKVINQS--HLKNLKSL 721
>UNIPROTKB|E1BSN1 [details] [associations]
symbol:CMIP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
InterPro:IPR001849 SMART:SM00233 GO:GO:0005543 OMA:HVEVERN
GeneTree:ENSGT00390000018220 EMBL:AADN02032334 EMBL:AADN02032335
EMBL:AADN02032336 EMBL:AADN02032337 EMBL:AADN02032338
EMBL:AADN02032339 EMBL:AADN02032340 EMBL:AADN02032341
EMBL:AADN02032342 EMBL:AADN02032343 EMBL:AADN02032344
EMBL:AADN02032345 EMBL:AADN02032346 EMBL:AADN02032347
IPI:IPI00586235 Ensembl:ENSGALT00000019601 Uniprot:E1BSN1
Length = 724
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 40/106 (37%), Positives = 61/106 (57%)
Query: 155 GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG-LCNLKCLELSDT 213
G+L+ L+L F +T C HL L +L+ LNL S GD GL L+ L L+ L L +T
Sbjct: 613 GNLENLSLAFTNVTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLCET 672
Query: 214 QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL-AGLSSLKSLNL 258
V +GL LS + +L S+N++ T +S + L A L +LK +++
Sbjct: 673 PVTDAGLLALSSMKSLCSLNMNSTKLSADTYEDLKAKLPNLKEVDV 718
>MGI|MGI:1921690 [details] [associations]
symbol:Cmip "c-Maf inducing protein" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001849
PROSITE:PS50003 SMART:SM00233 MGI:MGI:1921690 GO:GO:0005634
GO:GO:0005737 GO:GO:0005543 CTD:80790 eggNOG:NOG43637
HOGENOM:HOG000111809 HOVERGEN:HBG107725 OMA:HVEVERN
OrthoDB:EOG49ZXNN EMBL:AK016712 EMBL:AK085367 EMBL:AC118207
EMBL:AC121116 EMBL:BC028834 EMBL:AK173234 IPI:IPI00665002
IPI:IPI00808243 IPI:IPI00886354 IPI:IPI00985695
RefSeq:NP_001156734.1 RefSeq:NP_083217.1 UniGene:Mm.233181
ProteinModelPortal:Q9D486 SMR:Q9D486 STRING:Q9D486
PhosphoSite:Q9D486 PaxDb:Q9D486 PRIDE:Q9D486
Ensembl:ENSMUST00000095172 Ensembl:ENSMUST00000166750 GeneID:74440
KEGG:mmu:74440 UCSC:uc009noz.2 UCSC:uc009npa.2 UCSC:uc012gln.1
GeneTree:ENSGT00390000018220 InParanoid:Q9D486 NextBio:340761
Bgee:Q9D486 CleanEx:MM_4933407C03RIK Genevestigator:Q9D486
Uniprot:Q9D486
Length = 773
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 40/106 (37%), Positives = 61/106 (57%)
Query: 155 GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG-LCNLKCLELSDT 213
G+L+ L+L F +T C HL L +L+ LNL S GD GL L+ L L+ L L +T
Sbjct: 662 GNLENLSLAFTNVTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLCET 721
Query: 214 QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL-AGLSSLKSLNL 258
V +GL LS + +L S+N++ T +S + L A L +LK +++
Sbjct: 722 PVTDAGLLALSSMKSLCSLNMNSTKLSADTYEDLKAKLPNLKEVDV 767
Score = 119 (46.9 bits), Expect = 0.00062, P = 0.00062
Identities = 33/85 (38%), Positives = 50/85 (58%)
Query: 180 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG-LTNLESINLSFTG 238
NLE+L+L + +L L +LK L L TQ G +GLR LS LT L+ +NL T
Sbjct: 663 NLENLSLAFTNVTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLCETP 722
Query: 239 ISDGSLRKLAGLSSLKSLNLDARQI 263
++D L L+ + SL SLN+++ ++
Sbjct: 723 VTDAGLLALSSMKSLCSLNMNSTKL 747
>UNIPROTKB|Q8IY22 [details] [associations]
symbol:CMIP "C-Maf-inducing protein" species:9606 "Homo
sapiens" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001849 PROSITE:PS50003 SMART:SM00233
GO:GO:0005634 GO:GO:0005737 GO:GO:0005543 EMBL:AY172689
EMBL:AC092135 EMBL:AC092139 EMBL:AC099480 EMBL:AC099524
EMBL:BC038113 EMBL:AB051481 IPI:IPI00028438 IPI:IPI00413562
IPI:IPI00641967 RefSeq:NP_085132.1 RefSeq:NP_938204.2
UniGene:Hs.594095 ProteinModelPortal:Q8IY22 SMR:Q8IY22
STRING:Q8IY22 PhosphoSite:Q8IY22 DMDM:167009139 PaxDb:Q8IY22
PRIDE:Q8IY22 Ensembl:ENST00000398040 Ensembl:ENST00000537098
Ensembl:ENST00000539778 GeneID:80790 KEGG:hsa:80790 UCSC:uc002fgq.2
UCSC:uc002fgr.2 UCSC:uc010vnq.2 CTD:80790 GeneCards:GC16P081478
H-InvDB:HIX0013273 HGNC:HGNC:24319 MIM:610112 neXtProt:NX_Q8IY22
eggNOG:NOG43637 HOGENOM:HOG000111809 HOVERGEN:HBG107725
InParanoid:Q8IY22 OMA:HVEVERN OrthoDB:EOG49ZXNN ChiTaRS:CMIP
GenomeRNAi:80790 NextBio:71197 ArrayExpress:Q8IY22 Bgee:Q8IY22
Genevestigator:Q8IY22 Uniprot:Q8IY22
Length = 773
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 40/106 (37%), Positives = 61/106 (57%)
Query: 155 GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG-LCNLKCLELSDT 213
G+L+ L+L F +T C HL L +L+ LNL S GD GL L+ L L+ L L +T
Sbjct: 662 GNLENLSLAFTNVTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLCET 721
Query: 214 QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL-AGLSSLKSLNL 258
V +GL LS + +L S+N++ T +S + L A L +LK +++
Sbjct: 722 PVTDAGLLALSSMKSLCSLNMNSTKLSADTYEDLKAKLPNLKEVDV 767
>MGI|MGI:2443416 [details] [associations]
symbol:Fbxl13 "F-box and leucine-rich repeat protein 13"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 MGI:MGI:2443416 InterPro:IPR006553
SMART:SM00367 eggNOG:NOG300245 GeneTree:ENSGT00700000104313
EMBL:AK029566 EMBL:AK030172 IPI:IPI00228939 IPI:IPI00970564
RefSeq:NP_796050.2 UniGene:Mm.442295 ProteinModelPortal:Q8CDU4
SMR:Q8CDU4 PhosphoSite:Q8CDU4 PRIDE:Q8CDU4
Ensembl:ENSMUST00000051358 GeneID:320118 KEGG:mmu:320118
UCSC:uc008wop.2 UCSC:uc008woq.1 CTD:222235 HOGENOM:HOG000006699
HOVERGEN:HBG051673 InParanoid:Q8CDU4 KO:K10279 OMA:LQIGCKQ
OrthoDB:EOG4DBTD3 NextBio:396064 Bgee:Q8CDU4 CleanEx:MM_FBXL13
Genevestigator:Q8CDU4 Uniprot:Q8CDU4
Length = 790
Score = 141 (54.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 63/255 (24%), Positives = 116/255 (45%)
Query: 22 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGL------MKLESLNIKWCNCITDSD 75
+T +K+ + L L L+L C RI G + LK ++L LN+ C+ + DS
Sbjct: 490 LTDSSLKSLSLLKQLTVLNLTNCIRI--GDIGLKHFFDGPASIRLRELNLTNCSLLGDSS 547
Query: 76 MKPLSG-LTNLKSLQI-SCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSL 133
+ LS NL L + +C +TD I Y G ++ + LS L
Sbjct: 548 VIRLSERCPNLHYLNLRNCEHLTDLAIEYIASMLSLISVDLSGTLISNEGMTILSRHRKL 607
Query: 134 FYLNLNRC-QLSDDGCEKFSKIGSL-KVLNLGF-NEITDECLVHLKGL-TNLESLNLDSC 189
++++ C ++D G + K L + L++ + +++TD+ + + T + SLN+ C
Sbjct: 608 REVSVSDCVNITDFGIRAYCKTSLLLEHLDVSYCSQLTDDIIKTIAIFCTRITSLNIAGC 667
Query: 190 G-IGDEGLVNLTGLCN-LKCLELSDT-QVGSSGLRHLS-GLTNLESINLSFT-GISDGSL 244
I D G+ L+ C+ L L++S Q+ ++ L G L + + F IS +
Sbjct: 668 PKITDAGMEILSARCHYLHILDISGCIQLTDQIIQDLQIGCKQLRILKMQFCKSISPAAA 727
Query: 245 RKLAGLSSLKSLNLD 259
+K++ + + N D
Sbjct: 728 QKMSSVVQHQEYNSD 742
Score = 122 (48.0 bits), Expect = 0.00030, P = 0.00030
Identities = 77/306 (25%), Positives = 136/306 (44%)
Query: 32 GLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 91
G L+ LDL CT++ LV + ++ S+ + I+DS K LS +LK ++
Sbjct: 406 GCHKLIYLDLSGCTQV---LV--EKCPRISSVVLIGSPHISDSAFKALSSC-DLKKIRFE 459
Query: 92 CSK-VTDSGI-AYXXXXXXXXXXXXEGCP-VTAACLDSLSALGSLFYLNLNRC-QLSDDG 147
+K ++D+ + C +T + L SLS L L LNL C ++ D G
Sbjct: 460 GNKRISDACFKSIDRNYPGINHIYMVDCKGLTDSSLKSLSLLKQLTVLNLTNCIRIGDIG 519
Query: 148 CEKF-SKIGSLKV--LNL-GFNEITDECLVHL-KGLTNLESLNLDSCG-IGDEGLVNLTG 201
+ F S+++ LNL + + D ++ L + NL LNL +C + D + +
Sbjct: 520 LKHFFDGPASIRLRELNLTNCSLLGDSSVIRLSERCPNLHYLNLRNCEHLTDLAIEYIAS 579
Query: 202 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS-FTGISDGSLRKLAGLSSL-KSLNLD 259
+ +L ++LS T + + G+ LS L +++S I+D +R S L + L++
Sbjct: 580 MLSLISVDLSGTLISNEGMTILSRHRKLREVSVSDCVNITDFGIRAYCKTSLLLEHLDVS 639
Query: 260 -ARQIXXXXXXXXXXX-XXXXXXDLFGA-RITDSGAAYLR-NFKNLRSLEICGG-GLTDA 314
Q+ ++ G +ITD+G L L L+I G LTD
Sbjct: 640 YCSQLTDDIIKTIAIFCTRITSLNIAGCPKITDAGMEILSARCHYLHILDISGCIQLTDQ 699
Query: 315 GVKHIK 320
++ ++
Sbjct: 700 IIQDLQ 705
>UNIPROTKB|Q9UKC9 [details] [associations]
symbol:FBXL2 "F-box/LRR-repeat protein 2" species:9606
"Homo sapiens" [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006513 "protein monoubiquitination" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0016020 "membrane"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0006464
"cellular protein modification process" evidence=TAS] [GO:0006508
"proteolysis" evidence=TAS] InterPro:IPR001810 Pfam:PF00646
PROSITE:PS50181 SMART:SM00256 GO:GO:0005737 GO:GO:0019048
GO:GO:0016020 GO:GO:0006508 GO:GO:0006511 GO:GO:0004842
InterPro:IPR006553 SMART:SM00367 GO:GO:0006513 eggNOG:NOG300245
KO:K10268 CTD:25827 HOGENOM:HOG000230659 HOVERGEN:HBG051586
OMA:LTENVFG OrthoDB:EOG4KPTB9 EMBL:AF174589 EMBL:AF176518
EMBL:AF186273 EMBL:AK001438 EMBL:AK298967 EMBL:CR457121
EMBL:AC122176 EMBL:AC123900 EMBL:BC031556 EMBL:AL049953
IPI:IPI00296850 IPI:IPI00923623 PIR:T08680 RefSeq:NP_001165184.1
RefSeq:NP_036289.3 UniGene:Hs.475872 ProteinModelPortal:Q9UKC9
SMR:Q9UKC9 IntAct:Q9UKC9 MINT:MINT-1390736 STRING:Q9UKC9
DMDM:145559475 PRIDE:Q9UKC9 DNASU:25827 Ensembl:ENST00000484457
Ensembl:ENST00000507198 GeneID:25827 KEGG:hsa:25827 UCSC:uc003cfp.3
GeneCards:GC03P033293 HGNC:HGNC:13598 MIM:605652 neXtProt:NX_Q9UKC9
PharmGKB:PA28021 InParanoid:Q9UKC9 PhylomeDB:Q9UKC9 ChiTaRS:FBXL2
GenomeRNAi:25827 NextBio:47109 ArrayExpress:Q9UKC9 Bgee:Q9UKC9
CleanEx:HS_FBXL2 Genevestigator:Q9UKC9 GermOnline:ENSG00000153558
Uniprot:Q9UKC9
Length = 423
Score = 137 (53.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 58/169 (34%), Positives = 82/169 (48%)
Query: 36 LVKLDLERCTRIHG-GLVNL-KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI--- 90
LV L+L+ C+RI G+V + +G +L++L + C+ +TD+ + L GL N LQI
Sbjct: 210 LVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTAL-GL-NCPRLQILEA 267
Query: 91 -SCSKVTDSGIAYXXXX-XXXXXXXXEGCP-VTAACLDSLSA-LGSLFYLNLNRCQL-SD 145
CS +TD+G E C +T + L LS L L+L+ C+L +D
Sbjct: 268 ARCSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITD 327
Query: 146 DGCEKFSK--IGS--LKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC 189
DG S G L+VL L ITD L HL+ LE L L C
Sbjct: 328 DGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDC 376
>UNIPROTKB|Q5R3Z8 [details] [associations]
symbol:FBXL2 "F-box/LRR-repeat protein 2" species:9601
"Pongo abelii" [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0016020
InterPro:IPR006553 SMART:SM00367 KO:K10268 HSSP:Q13309 CTD:25827
HOGENOM:HOG000230659 HOVERGEN:HBG051586 EMBL:CR861354 EMBL:CR861462
RefSeq:NP_001127056.1 RefSeq:NP_001128909.1 UniGene:Pab.18445
UniGene:Pab.19645 ProteinModelPortal:Q5R3Z8 GeneID:100174084
GeneID:100189854 KEGG:pon:100174084 KEGG:pon:100189854
InParanoid:Q5R3Z8 Uniprot:Q5R3Z8
Length = 423
Score = 137 (53.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 58/169 (34%), Positives = 82/169 (48%)
Query: 36 LVKLDLERCTRIHG-GLVNL-KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI--- 90
LV L+L+ C+RI G+V + +G +L++L + C+ +TD+ + L GL N LQI
Sbjct: 210 LVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTAL-GL-NCPRLQILEA 267
Query: 91 -SCSKVTDSGIAYXXXX-XXXXXXXXEGCP-VTAACLDSLSA-LGSLFYLNLNRCQL-SD 145
CS +TD+G E C +T + L LS L L+L+ C+L +D
Sbjct: 268 ARCSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITD 327
Query: 146 DGCEKFSK--IGS--LKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC 189
DG S G L+VL L ITD L HL+ LE L L C
Sbjct: 328 DGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDC 376
>UNIPROTKB|F1PWK1 [details] [associations]
symbol:FBXL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0006513
"protein monoubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0016020
GO:GO:0006511 GO:GO:0004842 GeneTree:ENSGT00700000104023
InterPro:IPR006553 SMART:SM00367 GO:GO:0006513 OMA:LTENVFG
EMBL:AAEX03013456 Ensembl:ENSCAFT00000007462 Uniprot:F1PWK1
Length = 422
Score = 136 (52.9 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 54/167 (32%), Positives = 82/167 (49%)
Query: 36 LVKLDLERCTRIHG-GLVNL-KGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS- 91
LV L+L+ C+RI G+V + +G +L++L + C+ +TD+ + L+ L+ L+ +
Sbjct: 209 LVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALALNCPRLQILEAAR 268
Query: 92 CSKVTDSGIAYXXXX-XXXXXXXXEGCP-VTAACLDSLSA-LGSLFYLNLNRCQL-SDDG 147
CS +TD+G E C +T + L LS L L+L+ C+L +DDG
Sbjct: 269 CSHLTDAGFTLLARNCHDLEKMDLEECILITDSTLIQLSVHCPKLQALSLSHCELITDDG 328
Query: 148 CEKFSK--IGS--LKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC 189
S G L+VL L ITD L HL+ LE L L C
Sbjct: 329 ILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDC 375
Score = 115 (45.5 bits), Expect = 0.00074, P = 0.00074
Identities = 54/206 (26%), Positives = 89/206 (43%)
Query: 36 LVKLDLERCTRI-HGGLVNL-KGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQI-S 91
L LDL C I + L + +G LE LN+ WC+ IT ++ L G LK+L +
Sbjct: 131 LKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRG 190
Query: 92 CSKVTDSGIAYXXXX-XXXXXXXXEGCP-VT-AACLDSLSALGSLFYLNLNRCQ-LSDDG 147
C+++ D + + + C +T + L L L+ C L+D
Sbjct: 191 CTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDAS 250
Query: 148 CEKFS-KIGSLKVLNLG-FNEITDECLVHL-KGLTNLESLNLDSCG-IGDEGLVNLTGLC 203
+ L++L + +TD L + +LE ++L+ C I D L+ L+ C
Sbjct: 251 LTALALNCPRLQILEAARCSHLTDAGFTLLARNCHDLEKMDLEECILITDSTLIQLSVHC 310
Query: 204 -NLKCLELSDTQ-VGSSGLRHLSGLT 227
L+ L LS + + G+ HLS T
Sbjct: 311 PKLQALSLSHCELITDDGILHLSNST 336
>UNIPROTKB|A6H779 [details] [associations]
symbol:FBXL2 "F-box/LRR-repeat protein 2" species:9913 "Bos
taurus" [GO:0016020 "membrane" evidence=ISS] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 GO:GO:0016020 GO:GO:0006511
GO:GO:0004842 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 GO:GO:0006513 eggNOG:NOG300245 KO:K10268
EMBL:BC146145 IPI:IPI00854546 RefSeq:NP_001092623.1
UniGene:Bt.54599 Ensembl:ENSBTAT00000005160 GeneID:616212
KEGG:bta:616212 CTD:25827 HOGENOM:HOG000230659 HOVERGEN:HBG051586
InParanoid:A6H779 OMA:LTENVFG OrthoDB:EOG4KPTB9 NextBio:20900019
Uniprot:A6H779
Length = 423
Score = 136 (52.9 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 54/167 (32%), Positives = 80/167 (47%)
Query: 36 LVKLDLERCTRI-HGGLVNL-KGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS- 91
LV L+L+ C+R+ G+V L +G +L++L + C +TD+ + L+ L+ L+ +
Sbjct: 210 LVSLNLQSCSRVTDDGVVQLCRGCPRLQALCLSGCGSLTDASLTALALNCPRLQILEAAR 269
Query: 92 CSKVTDSGIAYXXXX-XXXXXXXXEGCP-VTAACLDSLSA-LGSLFYLNLNRCQL-SDDG 147
CS +TD+G E C +T L LS L L+L+ C+L +DDG
Sbjct: 270 CSHLTDAGFTLLARNCHDLEKMDLEECILITDRTLTQLSIHCPKLQALSLSHCELITDDG 329
Query: 148 CEKFSK--IGS--LKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC 189
S G L+VL L ITD L HL+ LE L L C
Sbjct: 330 ILHLSNSPCGHERLRVLELDNCLLITDVALEHLEHCRGLERLELYDC 376
>UNIPROTKB|Q81YT0 [details] [associations]
symbol:BAS0520 "Putative internalin" species:1392 "Bacillus
anthracis" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 Pfam:PF05031 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
InterPro:IPR014756 SUPFAM:SSF81296 InterPro:IPR025875 Pfam:PF12799
HSSP:P25147 InterPro:IPR019931 TIGRFAMs:TIGR01167
Gene3D:2.60.40.1220 InterPro:IPR014755 InterPro:IPR006635
PROSITE:PS50978 RefSeq:NP_843087.1 RefSeq:YP_017174.1
RefSeq:YP_026798.1 ProteinModelPortal:Q81YT0
EnsemblBacteria:EBBACT00000010697 EnsemblBacteria:EBBACT00000017841
EnsemblBacteria:EBBACT00000022856 GeneID:1087882 GeneID:2817231
GeneID:2849896 KEGG:ban:BA_0552 KEGG:bar:GBAA_0552 KEGG:bat:BAS0520
HOGENOM:HOG000083246 OMA:GLEYMTN ProtClustDB:CLSK915856
BioCyc:BANT260799:GJAJ-580-MONOMER
BioCyc:BANT261594:GJ7F-607-MONOMER Uniprot:Q81YT0
Length = 1070
Score = 141 (54.7 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 60/217 (27%), Positives = 100/217 (46%)
Query: 50 GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYXXXXXXX 109
G+ +LKGL +E+L ++ P+S L LK + +S +K+ + +
Sbjct: 215 GIESLKGLEYMENLERITIQGSDVRNIAPISQLKRLKVVDLSFNKIEN--VEPLVNLEKL 272
Query: 110 XXXXXEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD 169
+ + A + LS L + +NL+ ++SD + + SL+ L + N+ITD
Sbjct: 273 DILELQNNRI--ADVTPLSQLKKVRTINLSGNKISD--IKPLYNVSSLRKLYVSNNKITD 328
Query: 170 ECLVHLKGLTNLESLN-LDSCGIGDEGLVNLTGLCNLK-CLELSDTQVGSSGLRHLSGLT 227
T +E LN L + G+G GLVN+ + + +EL+ + + LS LT
Sbjct: 329 --------FTGIEQLNKLGTLGVGSNGLVNIEPISQMSGIVELNLEKNDIKDITSLSKLT 380
Query: 228 NLESINLSFTGISD-GSLRKLAGLSSLKSLNLDARQI 263
L+S+NL +SD SL L L LK + R I
Sbjct: 381 GLQSLNLEENYVSDVSSLSNLINLYELKLATNEIRDI 417
Score = 121 (47.7 bits), Expect = 0.00056, P = 0.00056
Identities = 64/246 (26%), Positives = 116/246 (47%)
Query: 20 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLV-NLKGLMKLESLNIKWCNCITDSDMKP 78
N QG+++ GL + +LER T I G V N+ + +L+ L + + +++P
Sbjct: 209 NIYAGQGIESLKGLEYME--NLERIT-IQGSDVRNIAPISQLKRLKVVDLSFNKIENVEP 265
Query: 79 LSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVT-AACLDSLSALGSLFYLN 137
L L L L++ +++ D + G ++ L ++S+L L+ N
Sbjct: 266 LVNLEKLDILELQNNRIAD--VTPLSQLKKVRTINLSGNKISDIKPLYNVSSLRKLYVSN 323
Query: 138 LNRCQLSD-DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 196
N+ ++D G E+ +K+G+L V + G I E + + G+ L NL+ I D +
Sbjct: 324 -NK--ITDFTGIEQLNKLGTLGVGSNGLVNI--EPISQMSGIVEL---NLEKNDIKD--I 373
Query: 197 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 256
+L+ L L+ L L + V S + LS L NL + L+ I D +R + L K +
Sbjct: 374 TSLSKLTGLQSLNLEENYV--SDVSSLSNLINLYELKLATNEIRD--IRPIQELG--KRI 427
Query: 257 NLDARQ 262
+DA++
Sbjct: 428 KIDAQR 433
>TIGR_CMR|BA_0552 [details] [associations]
symbol:BA_0552 "internalin, putative" species:198094
"Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
evidence=ND] [GO:0009405 "pathogenesis" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 Pfam:PF05031 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
InterPro:IPR014756 SUPFAM:SSF81296 InterPro:IPR025875 Pfam:PF12799
HSSP:P25147 InterPro:IPR019931 TIGRFAMs:TIGR01167
Gene3D:2.60.40.1220 InterPro:IPR014755 InterPro:IPR006635
PROSITE:PS50978 RefSeq:NP_843087.1 RefSeq:YP_017174.1
RefSeq:YP_026798.1 ProteinModelPortal:Q81YT0
EnsemblBacteria:EBBACT00000010697 EnsemblBacteria:EBBACT00000017841
EnsemblBacteria:EBBACT00000022856 GeneID:1087882 GeneID:2817231
GeneID:2849896 KEGG:ban:BA_0552 KEGG:bar:GBAA_0552 KEGG:bat:BAS0520
HOGENOM:HOG000083246 OMA:GLEYMTN ProtClustDB:CLSK915856
BioCyc:BANT260799:GJAJ-580-MONOMER
BioCyc:BANT261594:GJ7F-607-MONOMER Uniprot:Q81YT0
Length = 1070
Score = 141 (54.7 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 60/217 (27%), Positives = 100/217 (46%)
Query: 50 GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYXXXXXXX 109
G+ +LKGL +E+L ++ P+S L LK + +S +K+ + +
Sbjct: 215 GIESLKGLEYMENLERITIQGSDVRNIAPISQLKRLKVVDLSFNKIEN--VEPLVNLEKL 272
Query: 110 XXXXXEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD 169
+ + A + LS L + +NL+ ++SD + + SL+ L + N+ITD
Sbjct: 273 DILELQNNRI--ADVTPLSQLKKVRTINLSGNKISD--IKPLYNVSSLRKLYVSNNKITD 328
Query: 170 ECLVHLKGLTNLESLN-LDSCGIGDEGLVNLTGLCNLK-CLELSDTQVGSSGLRHLSGLT 227
T +E LN L + G+G GLVN+ + + +EL+ + + LS LT
Sbjct: 329 --------FTGIEQLNKLGTLGVGSNGLVNIEPISQMSGIVELNLEKNDIKDITSLSKLT 380
Query: 228 NLESINLSFTGISD-GSLRKLAGLSSLKSLNLDARQI 263
L+S+NL +SD SL L L LK + R I
Sbjct: 381 GLQSLNLEENYVSDVSSLSNLINLYELKLATNEIRDI 417
Score = 121 (47.7 bits), Expect = 0.00056, P = 0.00056
Identities = 64/246 (26%), Positives = 116/246 (47%)
Query: 20 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLV-NLKGLMKLESLNIKWCNCITDSDMKP 78
N QG+++ GL + +LER T I G V N+ + +L+ L + + +++P
Sbjct: 209 NIYAGQGIESLKGLEYME--NLERIT-IQGSDVRNIAPISQLKRLKVVDLSFNKIENVEP 265
Query: 79 LSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVT-AACLDSLSALGSLFYLN 137
L L L L++ +++ D + G ++ L ++S+L L+ N
Sbjct: 266 LVNLEKLDILELQNNRIAD--VTPLSQLKKVRTINLSGNKISDIKPLYNVSSLRKLYVSN 323
Query: 138 LNRCQLSD-DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 196
N+ ++D G E+ +K+G+L V + G I E + + G+ L NL+ I D +
Sbjct: 324 -NK--ITDFTGIEQLNKLGTLGVGSNGLVNI--EPISQMSGIVEL---NLEKNDIKD--I 373
Query: 197 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 256
+L+ L L+ L L + V S + LS L NL + L+ I D +R + L K +
Sbjct: 374 TSLSKLTGLQSLNLEENYV--SDVSSLSNLINLYELKLATNEIRD--IRPIQELG--KRI 427
Query: 257 NLDARQ 262
+DA++
Sbjct: 428 KIDAQR 433
>UNIPROTKB|B6UHV2 [details] [associations]
symbol:B6UHV2 "Transport inhibitor response 1 protein"
species:4577 "Zea mays" [GO:0000822 "inositol hexakisphosphate
binding" evidence=ISS] [GO:0009734 "auxin mediated signaling
pathway" evidence=ISS] InterPro:IPR001810 SMART:SM00256
GO:GO:0009734 GO:GO:0000822 UniGene:Zm.94186 EMBL:EU976817
Gramene:B6UHV2 Uniprot:B6UHV2
Length = 573
Score = 106 (42.4 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 43/124 (34%), Positives = 61/124 (49%)
Query: 146 DGCEKFSKIGSLKVLNLGFNEITDECLVHLK-GLTNLESLNLDSC-GIGDEGLVNLTGLC 203
D C + L+ L L F +TDECL L TN +SL L C G GL N+ C
Sbjct: 93 DACARACP--GLEELRLKFMVVTDECLKLLSLSFTNFKSLVLVCCEGFSTTGLANIATNC 150
Query: 204 N-LKCLELSDTQVGSSGLRHLS----GLTNLESINLS-FTG-ISDGSLRKLAGLS-SLKS 255
LK L+L + V + ++ T+LE +N S TG ++ +L +L S +LKS
Sbjct: 151 RFLKELDLQKSCVKHQDHQWINCFPKSSTSLECLNFSCLTGEVNAVALEELVARSPNLKS 210
Query: 256 LNLD 259
L L+
Sbjct: 211 LRLN 214
Score = 74 (31.1 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 30/115 (26%), Positives = 50/115 (43%)
Query: 289 DSG-AAYLRNFKNLRSLEICGGGLTDAGVKHIKDXXXXXXXXXXXXXXXTDKTLE-LISG 346
D G A +R+ + LR L + G LTD+ +I TD + +++G
Sbjct: 415 DEGFGAIVRSCRGLRRLAM-SGFLTDSVFLYIGMYAEKLEMLSVTFAGDTDDGMVYVLNG 473
Query: 347 LTGLVSLNVSNSRITSAGL-RHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 400
L L + S A L +++RSL + SC++T K L + +PN+
Sbjct: 474 CRNLKKLVIKESPFGDAALLAGAHRYESMRSLWMSSCQITLGGCKALAAT-MPNI 527
>UNIPROTKB|Q5LMY8 [details] [associations]
symbol:SPO3424 "Leucine rich repeat protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR025875 Pfam:PF12799
RefSeq:YP_168620.1 ProteinModelPortal:Q5LMY8 GeneID:3194873
KEGG:sil:SPO3424 PATRIC:23380307 Uniprot:Q5LMY8
Length = 556
Score = 135 (52.6 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 65/233 (27%), Positives = 109/233 (46%)
Query: 29 AFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL 88
+ A L L LDL T++ + L L +L +L++ N SD+ PL+ LT L L
Sbjct: 42 SIAELTELRDLDLNN-TQV-SDIAPLAALTRLNALSL---NDTQVSDIAPLAALTRLTML 96
Query: 89 QISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGC 148
++ ++V+D IA V+ + L+AL L L+LN+ Q+SD
Sbjct: 97 SLNNTQVSD--IAPLAALTRLTGLWLHNTQVSD--IAPLAALTRLTGLSLNKTQVSDIAA 152
Query: 149 EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL 208
+ + L L+L +++D + L LT L +L+L++ D + L L L L
Sbjct: 153 --LAALTRLTTLSLNNTQVSD--IAPLASLTRLTTLSLENMQASD--IAPLAALTRLIML 206
Query: 209 ELSDTQVGS-SGLRHLSGL-TNLESINLSFTGIS----DGSLRKLAGLSSLKS 255
L++TQ LR L+ L T+ I L+FT + D + ++A + K+
Sbjct: 207 SLNNTQARDLRPLRRLTRLVTDPGPIGLTFTNCTAAQQDPEIARIAKIEDNKT 259
>TIGR_CMR|SPO_3424 [details] [associations]
symbol:SPO_3424 "leucine rich repeat protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001611 PROSITE:PS51450 EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR025875 Pfam:PF12799
RefSeq:YP_168620.1 ProteinModelPortal:Q5LMY8 GeneID:3194873
KEGG:sil:SPO3424 PATRIC:23380307 Uniprot:Q5LMY8
Length = 556
Score = 135 (52.6 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 65/233 (27%), Positives = 109/233 (46%)
Query: 29 AFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL 88
+ A L L LDL T++ + L L +L +L++ N SD+ PL+ LT L L
Sbjct: 42 SIAELTELRDLDLNN-TQV-SDIAPLAALTRLNALSL---NDTQVSDIAPLAALTRLTML 96
Query: 89 QISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGC 148
++ ++V+D IA V+ + L+AL L L+LN+ Q+SD
Sbjct: 97 SLNNTQVSD--IAPLAALTRLTGLWLHNTQVSD--IAPLAALTRLTGLSLNKTQVSDIAA 152
Query: 149 EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL 208
+ + L L+L +++D + L LT L +L+L++ D + L L L L
Sbjct: 153 --LAALTRLTTLSLNNTQVSD--IAPLASLTRLTTLSLENMQASD--IAPLAALTRLIML 206
Query: 209 ELSDTQVGS-SGLRHLSGL-TNLESINLSFTGIS----DGSLRKLAGLSSLKS 255
L++TQ LR L+ L T+ I L+FT + D + ++A + K+
Sbjct: 207 SLNNTQARDLRPLRRLTRLVTDPGPIGLTFTNCTAAQQDPEIARIAKIEDNKT 259
>RGD|1562243 [details] [associations]
symbol:Fbxl2 "F-box and leucine-rich repeat protein 2"
species:10116 "Rattus norvegicus" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0006513 "protein
monoubiquitination" evidence=IEA;ISO] [GO:0016020 "membrane"
evidence=IEA;ISO] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
RGD:1562243 GO:GO:0016020 GO:GO:0006511 GO:GO:0004842
GeneTree:ENSGT00700000104023 InterPro:IPR006553 SMART:SM00367
GO:GO:0006513 IPI:IPI00366732 Ensembl:ENSRNOT00000033126
NextBio:682654 Uniprot:F1M768
Length = 422
Score = 133 (51.9 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 55/169 (32%), Positives = 82/169 (48%)
Query: 36 LVKLDLERCTRI-HGGLVNL-KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI--- 90
LV L+L+ C+RI G+V + +G +L++L + C+ +TD+ + L GL N LQ+
Sbjct: 209 LVSLNLQSCSRITDDGVVQICRGCHRLQALCLSGCSNLTDASLTAL-GL-NCPRLQVLEA 266
Query: 91 -SCSKVTDSGIAYXXXX-XXXXXXXXEGCP-VTAACLDSLSA-LGSLFYLNLNRCQL-SD 145
CS +TD+G E C +T + L LS L L+L+ C+L +D
Sbjct: 267 ARCSHLTDAGFTLLARNCHDLEKMDLEECVLITDSTLIQLSIHCPKLQALSLSHCELITD 326
Query: 146 DGCEKFSK--IGS--LKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC 189
+G S G L+VL L +TD L HL+ LE L L C
Sbjct: 327 EGILHLSSSTCGHERLRVLELDNCLLVTDASLEHLENCRGLERLELYDC 375
>MGI|MGI:1919429 [details] [associations]
symbol:Fbxl2 "F-box and leucine-rich repeat protein 2"
species:10090 "Mus musculus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0006513 "protein monoubiquitination" evidence=IGI;IMP]
[GO:0016020 "membrane" evidence=ISO] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 MGI:MGI:1919429 GO:GO:0016020
GO:GO:0006511 GO:GO:0004842 GeneTree:ENSGT00700000104023
InterPro:IPR006553 SMART:SM00367 GO:GO:0006513 eggNOG:NOG300245
KO:K10268 CTD:25827 HOGENOM:HOG000230659 HOVERGEN:HBG051586
OrthoDB:EOG4KPTB9 EMBL:AK039010 EMBL:AK044693 EMBL:AK045742
EMBL:AK089994 IPI:IPI00112966 RefSeq:NP_848739.1 UniGene:Mm.386808
ProteinModelPortal:Q8BH16 SMR:Q8BH16 STRING:Q8BH16 PRIDE:Q8BH16
Ensembl:ENSMUST00000035090 Ensembl:ENSMUST00000117537 GeneID:72179
KEGG:mmu:72179 InParanoid:Q8BH16 OMA:TDNTLVQ NextBio:335633
Bgee:Q8BH16 CleanEx:MM_FBXL2 Genevestigator:Q8BH16
GermOnline:ENSMUSG00000032507 Uniprot:Q8BH16
Length = 423
Score = 133 (51.9 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 55/169 (32%), Positives = 82/169 (48%)
Query: 36 LVKLDLERCTRI-HGGLVNL-KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI--- 90
LV L+L+ C+RI G+V + +G +L++L + C+ +TD+ + L GL N LQ+
Sbjct: 210 LVSLNLQSCSRITDDGVVQICRGCHRLQALCLSGCSNLTDASLTAL-GL-NCPRLQVLEA 267
Query: 91 -SCSKVTDSGIAYXXXX-XXXXXXXXEGCP-VTAACLDSLSA-LGSLFYLNLNRCQL-SD 145
CS +TD+G E C +T + L LS L L+L+ C+L +D
Sbjct: 268 ARCSHLTDAGFTLLARNCHELEKMDLEECVLITDSTLVQLSIHCPKLQALSLSHCELITD 327
Query: 146 DGCEKFSK--IGS--LKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC 189
+G S G L+VL L +TD L HL+ LE L L C
Sbjct: 328 EGILHLSSSTCGHERLRVLELDNCLLVTDASLEHLENCRGLERLELYDC 376
>UNIPROTKB|Q724E1 [details] [associations]
symbol:inlE "Internalin E" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0009405 "pathogenesis"
evidence=ISS] [GO:0030260 "entry into host cell" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009405 eggNOG:COG4886
InterPro:IPR014756 SUPFAM:SSF81296 EMBL:AE017262
GenomeReviews:AE017262_GR GO:GO:0030260 InterPro:IPR025875
Pfam:PF12799 InterPro:IPR019931 TIGRFAMs:TIGR01167 PROSITE:PS50847
Gene3D:2.60.40.1220 InterPro:IPR014755 InterPro:IPR013378
InterPro:IPR012569 Pfam:PF09479 Pfam:PF08191 TIGRFAMs:TIGR02543
HOGENOM:HOG000011905 RefSeq:YP_012893.1 ProteinModelPortal:Q724E1
SMR:Q724E1 STRING:Q724E1 GeneID:2799899 KEGG:lmf:LMOf2365_0283
PATRIC:20321779 OMA:FTENEEP ProtClustDB:CLSK491300 Uniprot:Q724E1
Length = 499
Score = 134 (52.2 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 54/206 (26%), Positives = 103/206 (50%)
Query: 36 LVKLDLERCTRIHG---GLVNLKGLMKLESLN-IKWC-NCITDSDMKPLSGLTNLKSLQI 90
+ + DL+ T++ G+ ++G+ L +L+ ++ N ITD + PL+ LT + L +
Sbjct: 68 VTQTDLDSITQLSAKSAGITTIEGMQYLTNLSELELTDNQITD--VSPLANLTKITELGL 125
Query: 91 SCSKVTD-SGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCE 149
S + + D S +A + VT SL+ L +L LNL+ Q++D
Sbjct: 126 SGNPLKDVSALAGLKSLKMLHLIYTDITDVT-----SLAGLTNLQELNLDINQITD--IS 178
Query: 150 KFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE 209
+ + +L+ L+LG+ +++D L + L+ L LN ++C + D + L L +L +
Sbjct: 179 PLAALSNLQTLSLGYTQVSD--LTPIANLSKLTILNAENCKVSD--ISPLASLSSLTEVY 234
Query: 210 LSDTQVGSSGLRHLSGLTNLESINLS 235
L + Q+ S + L+ + NL I L+
Sbjct: 235 LRENQI--SDVSPLANIPNLSIIELT 258
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 43/132 (32%), Positives = 72/132 (54%)
Query: 131 GSLFYLNLNRCQLSDDGCEKFSKIGSL-KVLNLGF--NEITDECLVHLKGLTNLESLNLD 187
G + NL+ +L+D+ S + +L K+ LG N + D + L GL +L+ L+L
Sbjct: 91 GMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKD--VSALAGLKSLKMLHLI 148
Query: 188 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 247
I D + +L GL NL+ L L Q+ + + L+ L+NL++++L +T +SD L +
Sbjct: 149 YTDITD--VTSLAGLTNLQELNLDINQI--TDISPLAALSNLQTLSLGYTQVSD--LTPI 202
Query: 248 AGLSSLKSLNLD 259
A LS L LN +
Sbjct: 203 ANLSKLTILNAE 214
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 40/115 (34%), Positives = 60/115 (52%)
Query: 149 EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL 208
E + +L L L N+ITD + L LT + L L + D L GL +LK L
Sbjct: 90 EGMQYLTNLSELELTDNQITD--VSPLANLTKITELGLSGNPLKDVSA--LAGLKSLKML 145
Query: 209 ELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 263
L T + + + L+GLTNL+ +NL I+D + LA LS+L++L+L Q+
Sbjct: 146 HLIYTDI--TDVTSLAGLTNLQELNLDINQITD--ISPLAALSNLQTLSLGYTQV 196
>TAIR|locus:2136313 [details] [associations]
symbol:AT4G39270 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=ISS] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0002237 "response to molecule of bacterial
origin" evidence=RCA] [GO:0007165 "signal transduction"
evidence=RCA] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
[GO:0048767 "root hair elongation" evidence=RCA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR011009 Pfam:PF07714 PROSITE:PS50011
GO:GO:0005524 EMBL:CP002687 SUPFAM:SSF56112 Gene3D:2.60.120.200
InterPro:IPR013320 GO:GO:0004672 EMBL:AL161594 EMBL:AL050351
IPI:IPI00521676 PIR:T08575 RefSeq:NP_195638.1 UniGene:At.31106
ProteinModelPortal:Q9T033 SMR:Q9T033 STRING:Q9T033
EnsemblPlants:AT4G39270.1 GeneID:830083 KEGG:ath:AT4G39270
TAIR:At4g39270 InParanoid:Q9T033 OMA:RSLDWIT PhylomeDB:Q9T033
ProtClustDB:CLSN2685674 Genevestigator:Q9T033 Uniprot:Q9T033
Length = 864
Score = 137 (53.3 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 50/187 (26%), Positives = 84/187 (44%)
Query: 128 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 187
S+L +L L+L+ C ++ E +++ LKVL+L N I + + L L NL L+L
Sbjct: 123 SSLLTLEVLDLSSCSITGTIPESLTRLSHLKVLDLSKNAINGDIPLSLTSLQNLSILDLS 182
Query: 188 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 247
S + N+ L L+ L LS + SS L L+ L ++LSF G+S L
Sbjct: 183 SNSVFGSIPANIGALSKLQRLNLSRNTLTSSIPPSLGDLSVLIDLDLSFNGMSGSVPSDL 242
Query: 248 AGLSSLKSLNLDARQIXXXXX-XXXXXXXXXXXXDLFGARITDSGAAYLRNFKNLRSLEI 306
GL +L++L + ++ D G+ + + L + L+ L+I
Sbjct: 243 KGLRNLQTLVIAGNRLSGSLPPDLFSLLSKLQIIDFRGSGFIGALPSRLWSLPELKFLDI 302
Query: 307 CGGGLTD 313
G +D
Sbjct: 303 SGNHFSD 309
>TAIR|locus:2079721 [details] [associations]
symbol:AT3G07550 "AT3G07550" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
PROSITE:PS50181 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AC009853 EMBL:AK118929 EMBL:BT008530 IPI:IPI00516514
RefSeq:NP_566312.1 RefSeq:NP_850534.1 UniGene:At.18420
UniGene:At.28242 ProteinModelPortal:Q9SRR1 SMR:Q9SRR1 IntAct:Q9SRR1
PRIDE:Q9SRR1 EnsemblPlants:AT3G07550.1 EnsemblPlants:AT3G07550.2
GeneID:819944 KEGG:ath:AT3G07550 TAIR:At3g07550 eggNOG:NOG273409
HOGENOM:HOG000243751 InParanoid:Q9SRR1 OMA:IAKGCPL PhylomeDB:Q9SRR1
ProtClustDB:CLSN2688150 Genevestigator:Q9SRR1 Uniprot:Q9SRR1
Length = 395
Score = 132 (51.5 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 59/228 (25%), Positives = 103/228 (45%)
Query: 22 ITAQGMKAFAGLI-NLVKLDLERCTRIHGGLVNL-KGLMKLESLNIKWCNCITDSDMKPL 79
I+ G+ A NL + L RC GL L + + L+ +N+ +C ++D +K L
Sbjct: 130 ISDDGISTIASFCPNLSVVSLYRCNISDIGLETLARASLSLKCVNLSYCPLVSDFGIKAL 189
Query: 80 S-GLTNLKSLQIS-CSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLN 137
S L+S++IS C +T G+ + + C + + + + G + +LN
Sbjct: 190 SQACLQLESVKISNCKSIT--GVGFSGCSPTLGYVDADSCQLEPKGITGIISGGGIEFLN 247
Query: 138 LN--RCQLSDDGCEKF-SKIGS-LKVLNLGF-NEITDECLVHL-KGLTNLESLNLDSCG- 190
++ C + DG S I S L++LNL + DE + + KG L+ NL C
Sbjct: 248 ISGVSCYIRKDGLVPIGSGIASKLRILNLRMCRTVGDESIEAIAKGCPLLQEWNLALCHE 307
Query: 191 IGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHLS-GLTNLESINLS 235
+ G + C NLK L ++ + + GL L G NL+ + ++
Sbjct: 308 VKISGWEAVGKWCRNLKKLHVNRCRNLCDQGLLALRCGCMNLQILYMN 355
>TAIR|locus:2025012 [details] [associations]
symbol:RLP1 "AT1G07390" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0007165
"signal transduction" evidence=IC] [GO:0006457 "protein folding"
evidence=RCA] [GO:0006857 "oligopeptide transport" evidence=RCA]
[GO:0009408 "response to heat" evidence=RCA] [GO:0009644 "response
to high light intensity" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042542 "response
to hydrogen peroxide" evidence=RCA] InterPro:IPR001611
PROSITE:PS51450 EMBL:CP002684 InterPro:IPR025875 Pfam:PF12799
InterPro:IPR013210 Pfam:PF08263 IPI:IPI00938679
RefSeq:NP_001154318.1 UniGene:At.51513 ProteinModelPortal:F4HQM4
SMR:F4HQM4 PRIDE:F4HQM4 EnsemblPlants:AT1G07390.3 GeneID:837251
KEGG:ath:AT1G07390 OMA:TESSWAP ArrayExpress:F4HQM4 Uniprot:F4HQM4
Length = 1083
Score = 124 (48.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 55/251 (21%), Positives = 102/251 (40%)
Query: 124 LDSLSALGSLFYLNLNR---CQLSDD--GCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 178
L L + L LNL+ LSD G + F + L L+ N + + L
Sbjct: 75 LSLLHSFPQLQSLNLSWNWFTNLSDHFLGFKSFGTLDKLTTLDFSHNMFDNSIVPFLNAA 134
Query: 179 TNLESLNLDSCGIGDEGLV---NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS 235
T++ SL+L+S + EG+ L+ + NL+ L L D + L+ +LE ++LS
Sbjct: 135 TSIRSLHLESNYM--EGVFPPQELSNMTNLRVLNLKDNSFSFLSSQGLTDFRDLEVLDLS 192
Query: 236 FTGISDGSLRKLAGLSSLKSLNLDARQIXXXXXXXXXXXXXXXXX-DLFGARITDSGAAY 294
F G++D + LK+L+L+ + L G + + + +
Sbjct: 193 FNGVNDSEASHSLSTAKLKTLDLNFNPLSDFSQLKGLESLQELQVLKLRGNKFNHTLSTH 252
Query: 295 -LRNFKNLRSLEICGGGLTDAGVKHIKDXXXXXXXXXXXXXXXTDKTLELISGLTGLVSL 353
L++ K L+ L++ G T+ + H +D K L GL +
Sbjct: 253 VLKDLKMLQELDLSDNGFTN--LDHGRDVDESRSEKRFDFREVVQKVETLWIGLRLSFQM 310
Query: 354 NVSNSRITSAG 364
++++ + + G
Sbjct: 311 SITHHKSVTVG 321
Score = 58 (25.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 344 ISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 384
I L + SLN+S++R+T + + LK L SL L + K+
Sbjct: 904 IGDLQNIRSLNLSSNRLTGSIPDSISKLKGLESLDLSNNKL 944
Score = 51 (23.0 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 353 LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAN--D----IKRLQSRDLPN 399
L++S++ ++ + L+N+RSL L S ++T + D +K L+S DL N
Sbjct: 889 LDLSSNELSGEIPIEIGDLQNIRSLNLSSNRLTGSIPDSISKLKGLESLDLSN 941
Score = 44 (20.5 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 344 ISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 379
IS L GL SL++SN+++ + L L +L L +
Sbjct: 928 ISKLKGLESLDLSNNKLDGSIPPALADLNSLGYLNI 963
Score = 40 (19.1 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 345 SGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 379
+ LTGLV L + + T + L KNL L +
Sbjct: 623 ANLTGLVGLFLDGNNFTGSLEEGLLKSKNLTLLDI 657
>RGD|1308668 [details] [associations]
symbol:Lingo1 "leucine rich repeat and Ig domain containing 1"
species:10116 "Rattus norvegicus" [GO:0005154 "epidermal growth
factor receptor binding" evidence=ISO] [GO:0021954 "central nervous
system neuron development" evidence=ISO] [GO:0031175 "neuron
projection development" evidence=ISO] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISO] [GO:0048715 "negative regulation
of oligodendrocyte differentiation" evidence=ISO]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1308668 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 GO:GO:0021954
MEROPS:I43.001 GO:GO:0048715 HOGENOM:HOG000246971 OrthoDB:EOG40S0F8
CTD:84894 HOVERGEN:HBG057546 RefSeq:NP_001094192.1 UniGene:Rn.20269
GeneID:315691 KEGG:rno:315691 NextBio:669664 EMBL:BC092632
IPI:IPI00766651 ProteinModelPortal:Q562A6 STRING:Q562A6
PhosphoSite:Q562A6 UCSC:RGD:1308668 InParanoid:Q562A6
Genevestigator:Q562A6 Uniprot:Q562A6
Length = 517
Score = 125 (49.1 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 66/251 (26%), Positives = 102/251 (40%)
Query: 20 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNL---KGLMKLESLNIKWCNCITDSDM 76
N ++A AF L NL L L R R+ L+ L GL L L+I + D
Sbjct: 2 NIVSAVEPGAFNNLFNLRTLGL-RSNRLK--LIPLGVFTGLSNLTKLDISENKIVILLDY 58
Query: 77 KPLSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYL 136
L NLKSL++ + + E C +T+ ++LS L L L
Sbjct: 59 M-FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVL 117
Query: 137 NLNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNLESLNLDSCGIG 192
L ++ F ++ LKVL + + +T CL GL NL SL++ C +
Sbjct: 118 RLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLY---GL-NLTSLSITHCNLT 173
Query: 193 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSS 252
+ + L L+ L LS +G+ L L L+ I L ++ GL+
Sbjct: 174 AVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 233
Query: 253 LKSLNLDARQI 263
L+ LN+ Q+
Sbjct: 234 LRVLNVSGNQL 244
Score = 46 (21.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 346 GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 381
GL L LNVS +++T+ + NL +L L+S
Sbjct: 230 GLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDS 265
>TAIR|locus:2166978 [details] [associations]
symbol:AT5G23340 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR InterPro:IPR006553 SMART:SM00367
EMBL:AB007648 eggNOG:NOG300245 KO:K10268 EMBL:AY054268
EMBL:AY133522 EMBL:AK226277 IPI:IPI00524374 RefSeq:NP_197725.1
UniGene:At.21636 UniGene:At.71067 ProteinModelPortal:Q9FMW7
SMR:Q9FMW7 IntAct:Q9FMW7 STRING:Q9FMW7 PaxDb:Q9FMW7 PRIDE:Q9FMW7
EnsemblPlants:AT5G23340.1 GeneID:832398 KEGG:ath:AT5G23340
TAIR:At5g23340 HOGENOM:HOG000030079 InParanoid:Q9FMW7 OMA:DSCEQAG
PhylomeDB:Q9FMW7 ProtClustDB:CLSN2686136 Genevestigator:Q9FMW7
Uniprot:Q9FMW7
Length = 405
Score = 118 (46.6 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 54/205 (26%), Positives = 100/205 (48%)
Query: 22 ITAQGMKAFAGLINLVK-LDLERCTRIHG-GLVNL-KGLMKLESLNIKWCNCITDSDMKP 78
IT G+ + ++L++ LD+ C ++ GL + +G L +L++ C ITD +K
Sbjct: 111 ITDTGLASIGRCLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHLAGCRFITDESLKS 170
Query: 79 LSG-LTNLKSLQIS-CSKVTDSGIA-YXXXXXXXXXXXXEGCP-VTAACLDSLS--ALGS 132
LS +L++L + C+ +TDSG+A C V A + S++ S
Sbjct: 171 LSERCRDLEALGLQGCTNITDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSVAKACASS 230
Query: 133 LFYLNLNRC-QLSDDGCEKFSKI-GSLKVLNLG-FNEITDECLVHLKGLT--NLESLNLD 187
L L L C ++ ++ ++ +L+ L +G +I+DE ++ L +L++L +D
Sbjct: 231 LKTLKLLDCYKVGNESISSLAQFCKNLETLIIGGCRDISDESIMLLADSCKDSLKNLRMD 290
Query: 188 SC-GIGDEGLVNLTGLC-NLKCLEL 210
C I D L + C NL+ L++
Sbjct: 291 WCLNISDSSLSCILKQCKNLEALDI 315
Score = 50 (22.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 353 LNVSNSRITSAGLRHLKPLKNLRSLTLESCK-VTANDIKRLQSRDLPNL 400
LN+S+S ++ LK KNL +L + C+ VT + L S D+ L
Sbjct: 293 LNISDSSLSCI----LKQCKNLEALDIGCCEEVTDTAFRDLGSDDVLGL 337
>UNIPROTKB|Q724E3 [details] [associations]
symbol:inlC2 "Internalin C2" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0009405 "pathogenesis"
evidence=ISS] [GO:0030260 "entry into host cell" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009405 eggNOG:COG4886
InterPro:IPR014756 SUPFAM:SSF81296 EMBL:AE017262
GenomeReviews:AE017262_GR GO:GO:0030260 InterPro:IPR025875
Pfam:PF12799 InterPro:IPR019931 TIGRFAMs:TIGR01167
Gene3D:2.60.40.1220 InterPro:IPR014755 InterPro:IPR013378
InterPro:IPR012569 Pfam:PF09479 Pfam:PF08191 TIGRFAMs:TIGR02543
HOGENOM:HOG000011905 ProtClustDB:CLSK491294 RefSeq:YP_012891.1
PDB:4FHO PDBsum:4FHO ProteinModelPortal:Q724E3 SMR:Q724E3
STRING:Q724E3 GeneID:2799149 KEGG:lmf:LMOf2365_0281 PATRIC:20321773
OMA:TAINVIF Uniprot:Q724E3
Length = 548
Score = 129 (50.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 52/182 (28%), Positives = 88/182 (48%)
Query: 82 LTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLNLNRC 141
L NL L++ +++TD + G P+ + +++ L S+ L+L
Sbjct: 97 LNNLIGLELKDNQITD--LTPLKNLTKITELELSGNPLKN--VSAIAGLQSIKTLDLTST 152
Query: 142 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 201
Q++D + + +L+VL L N+IT+ + L GLTNL+ L++ + + D L L
Sbjct: 153 QITD--VTPLAGLSNLQVLYLDLNQITN--ISPLAGLTNLQYLSIGNNQVND--LTPLAN 206
Query: 202 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 261
L L L D ++ S + L+ L NL ++L ISD S LA LS+L + L +
Sbjct: 207 LSKLTTLRADDNKI--SDISPLASLPNLIEVHLKDNQISDVS--PLANLSNLFIVTLTNQ 262
Query: 262 QI 263
I
Sbjct: 263 TI 264
Score = 129 (50.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 62/222 (27%), Positives = 104/222 (46%)
Query: 20 NAI-TAQGMKAFAGLINLVKLD-LERCTRIHGGLVNLKGLMKLESL---NIKWCNCITDS 74
NA+ TA G + LD + + + G+ ++G+ L +L +K N ITD
Sbjct: 55 NAVKTATGKSNVTDAVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELK-DNQITD- 112
Query: 75 DMKPLSGLTNLKSLQISCSKVTD-SGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSL 133
+ PL LT + L++S + + + S IA + VT L LS L +
Sbjct: 113 -LTPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTP--LAGLSNL-QV 168
Query: 134 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 193
YL+LN Q+++ + + +L+ L++G N++ D L L L+ L +L D I D
Sbjct: 169 LYLDLN--QITN--ISPLAGLTNLQYLSIGNNQVND--LTPLANLSKLTTLRADDNKISD 222
Query: 194 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS 235
+ L L NL + L D Q+ S + L+ L+NL + L+
Sbjct: 223 --ISPLASLPNLIEVHLKDNQI--SDVSPLANLSNLFIVTLT 260
Score = 97 (39.2 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 29/92 (31%), Positives = 50/92 (54%)
Query: 177 GLTNLESL----NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 232
G+T +E + NL + D + +LT L NL ++++ ++ + L+++S + L+SI
Sbjct: 87 GVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLT--KITELELSGNPLKNVSAIAGLQSI 144
Query: 233 N-LSFTGISDGSLRKLAGLSSLKSLNLDARQI 263
L T + LAGLS+L+ L LD QI
Sbjct: 145 KTLDLTSTQITDVTPLAGLSNLQVLYLDLNQI 176
Score = 67 (28.6 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 344 ISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT-LESCKVTANDIKRLQSRDLPNLV 401
++GLT L L++ N+++ L PL NL LT L + +DI L S LPNL+
Sbjct: 182 LAGLTNLQYLSIGNNQVND-----LTPLANLSKLTTLRADDNKISDISPLAS--LPNLI 233
>MGI|MGI:1915522 [details] [associations]
symbol:Lingo1 "leucine rich repeat and Ig domain containing
1" species:10090 "Mus musculus" [GO:0005154 "epidermal growth
factor receptor binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IMP;IDA] [GO:0031175 "neuron projection
development" evidence=IDA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IDA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:1915522 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0043491 GO:GO:0031175
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0021954 HSSP:P21809 GO:GO:0048715
GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971 OrthoDB:EOG40S0F8
CTD:84894 HOVERGEN:HBG057546 EMBL:AK027262 EMBL:AK163538
EMBL:BC052384 EMBL:BC065696 EMBL:AY324324 IPI:IPI00134200
RefSeq:NP_851419.1 UniGene:Mm.246605 ProteinModelPortal:Q9D1T0
SMR:Q9D1T0 IntAct:Q9D1T0 STRING:Q9D1T0 PhosphoSite:Q9D1T0
PaxDb:Q9D1T0 PRIDE:Q9D1T0 Ensembl:ENSMUST00000053568
Ensembl:ENSMUST00000114247 GeneID:235402 KEGG:mmu:235402
InParanoid:Q9D1T0 ChiTaRS:LINGO1 NextBio:382644 Bgee:Q9D1T0
Genevestigator:Q9D1T0 Uniprot:Q9D1T0
Length = 614
Score = 125 (49.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 66/251 (26%), Positives = 102/251 (40%)
Query: 20 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNL---KGLMKLESLNIKWCNCITDSDM 76
N ++A AF L NL L L R R+ L+ L GL L L+I + D
Sbjct: 99 NIVSAVEPGAFNNLFNLRTLGL-RSNRLK--LIPLGVFTGLSNLTKLDISENKIVILLDY 155
Query: 77 KPLSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYL 136
L NLKSL++ + + E C +T+ ++LS L L L
Sbjct: 156 M-FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVL 214
Query: 137 NLNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNLESLNLDSCGIG 192
L ++ F ++ LKVL + + +T CL GL NL SL++ C +
Sbjct: 215 RLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLY---GL-NLTSLSITHCNLT 270
Query: 193 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSS 252
+ + L L+ L LS +G+ L L L+ I L ++ GL+
Sbjct: 271 AVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 330
Query: 253 LKSLNLDARQI 263
L+ LN+ Q+
Sbjct: 331 LRVLNVSGNQL 341
Score = 46 (21.3 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 346 GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 381
GL L LNVS +++T+ + NL +L L+S
Sbjct: 327 GLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDS 362
>UNIPROTKB|G3V881 [details] [associations]
symbol:Lingo1 "Leucine rich repeat neuronal 6A, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1308668 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH473975
GeneTree:ENSGT00690000101682 CTD:84894 RefSeq:NP_001094192.1
UniGene:Rn.20269 ProteinModelPortal:G3V881 SMR:G3V881 PRIDE:G3V881
Ensembl:ENSRNOT00000023084 GeneID:315691 KEGG:rno:315691
NextBio:669664 Uniprot:G3V881
Length = 620
Score = 125 (49.1 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 66/251 (26%), Positives = 102/251 (40%)
Query: 20 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNL---KGLMKLESLNIKWCNCITDSDM 76
N ++A AF L NL L L R R+ L+ L GL L L+I + D
Sbjct: 105 NIVSAVEPGAFNNLFNLRTLGL-RSNRLK--LIPLGVFTGLSNLTKLDISENKIVILLDY 161
Query: 77 KPLSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYL 136
L NLKSL++ + + E C +T+ ++LS L L L
Sbjct: 162 M-FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVL 220
Query: 137 NLNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNLESLNLDSCGIG 192
L ++ F ++ LKVL + + +T CL GL NL SL++ C +
Sbjct: 221 RLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLY---GL-NLTSLSITHCNLT 276
Query: 193 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSS 252
+ + L L+ L LS +G+ L L L+ I L ++ GL+
Sbjct: 277 AVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 336
Query: 253 LKSLNLDARQI 263
L+ LN+ Q+
Sbjct: 337 LRVLNVSGNQL 347
Score = 46 (21.3 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 346 GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 381
GL L LNVS +++T+ + NL +L L+S
Sbjct: 333 GLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDS 368
>FB|FBgn0034083 [details] [associations]
symbol:lbk "lambik" species:7227 "Drosophila melanogaster"
[GO:0048477 "oogenesis" evidence=IMP] [GO:0008407 "chaeta
morphogenesis" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 EMBL:AE013599 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 RefSeq:NP_611091.2
ProteinModelPortal:A1ZAB1 SMR:A1ZAB1 STRING:A1ZAB1 PaxDb:A1ZAB1
EnsemblMetazoa:FBtr0302084 GeneID:36788 KEGG:dme:Dmel_CG8434
UCSC:CG8434-RA CTD:36788 FlyBase:FBgn0034083 eggNOG:NOG329771
InParanoid:A1ZAB1 OMA:LEINWST OrthoDB:EOG4T4B98 GenomeRNAi:36788
NextBio:800384 Bgee:A1ZAB1 Uniprot:A1ZAB1
Length = 1252
Score = 136 (52.9 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 62/248 (25%), Positives = 105/248 (42%)
Query: 19 NNAITAQGMKAFAGLINLVKLDLER-CTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 77
NN + + L+NL K+ L+R + + L GL L N N IT +
Sbjct: 300 NNKLNDTTVLEIRNLLNLTKVSLKRNLLEVIPKFIGLSGLKHLVLAN----NHITSISSE 355
Query: 78 PLSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLN 137
L+ L L++L +S +K+ + +T S + L +L L
Sbjct: 356 SLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLNNLTDLE 415
Query: 138 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG--DEG 195
L+ +LS F + LK L L FN++ +GL ++++L L S I +G
Sbjct: 416 LSNNRLSTLPIRVFKNLNQLKKLALNFNQLEINWST-FRGLESMKNLQLKSNKIRALQDG 474
Query: 196 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 255
+ + + ++ ++L+ Q+ S + L LT L +NLSF IS + SL+
Sbjct: 475 VFYV--MHKIETIDLAMNQISSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFTQSLEV 532
Query: 256 LNLDARQI 263
L+L I
Sbjct: 533 LDLSNNAI 540
Score = 41 (19.5 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 344 ISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 381
+SGL L LN+ ++ + S + + + L L +S
Sbjct: 625 MSGLNNLEILNLGSNALASIQVNAFEHMLRLNKLVFKS 662
>UNIPROTKB|P25147 [details] [associations]
symbol:inlB "Internalin B" species:169963 "Listeria
monocytogenes EGD-e" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001611 PROSITE:PS51450 eggNOG:COG4886
InterPro:IPR014756 SUPFAM:SSF81296 InterPro:IPR025875 Pfam:PF12799
GenomeReviews:AL591824_GR Gene3D:2.60.40.1220 InterPro:IPR014755
InterPro:IPR013378 InterPro:IPR012569 Pfam:PF09479 Pfam:PF08191
TIGRFAMs:TIGR02543 EMBL:M67471 EMBL:AJ012346 EMBL:AL591975
PIR:AC1129 PIR:C39930 RefSeq:NP_463963.1 PDB:1D0B PDB:1H6T PDB:1M9S
PDB:1OTM PDB:1OTN PDB:1OTO PDB:2UZX PDB:2UZY PDB:2WQU PDB:2WQV
PDB:2WQW PDB:2WQX PDB:2Y5P PDB:2Y5Q PDB:4AW4 PDBsum:1D0B
PDBsum:1H6T PDBsum:1M9S PDBsum:1OTM PDBsum:1OTN PDBsum:1OTO
PDBsum:2UZX PDBsum:2UZY PDBsum:2WQU PDBsum:2WQV PDBsum:2WQW
PDBsum:2WQX PDBsum:2Y5P PDBsum:2Y5Q PDBsum:4AW4
ProteinModelPortal:P25147 SMR:P25147 IntAct:P25147 GeneID:986892
KEGG:lmo:lmo0434 PATRIC:20309923 GenoList:LMO0434 KO:K13731
OMA:KYCLISG ProtClustDB:CLSK2393592 EvolutionaryTrace:P25147
InterPro:IPR025987 Pfam:PF13457 Uniprot:P25147
Length = 630
Score = 128 (50.1 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 51/137 (37%), Positives = 73/137 (53%)
Query: 127 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD-ECLVHLKGLTNLESLN 185
L+ L +L +L L+ ++ D + LK L+L N I+D LVHL LESL
Sbjct: 116 LANLKNLGWLFLDENKVKD--LSSLKDLKKLKSLSLEHNGISDINGLVHLP---QLESLY 170
Query: 186 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 245
L + I D + L+ L L L L D Q+ S + L+GLT L+++ LS ISD LR
Sbjct: 171 LGNNKITD--ITVLSRLTKLDTLSLEDNQI--SDIVPLAGLTKLQNLYLSKNHISD--LR 224
Query: 246 KLAGLSSLKSLNLDARQ 262
LAGL +L L L +++
Sbjct: 225 ALAGLKNLDVLELFSQE 241
>UNIPROTKB|Q724E2 [details] [associations]
symbol:inlD "Internalin D" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0009405 "pathogenesis"
evidence=ISS] [GO:0030260 "entry into host cell" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009405 eggNOG:COG4886
InterPro:IPR014756 SUPFAM:SSF81296 EMBL:AE017262
GenomeReviews:AE017262_GR GO:GO:0030260 InterPro:IPR025875
Pfam:PF12799 InterPro:IPR019931 TIGRFAMs:TIGR01167
Gene3D:2.60.40.1220 InterPro:IPR014755 InterPro:IPR013378
InterPro:IPR012569 Pfam:PF09479 Pfam:PF08191 TIGRFAMs:TIGR02543
HOGENOM:HOG000011905 RefSeq:YP_012892.1 ProteinModelPortal:Q724E2
STRING:Q724E2 GeneID:2799473 KEGG:lmf:LMOf2365_0282 PATRIC:20321775
OMA:AESSNIA ProtClustDB:CLSK491294 Uniprot:Q724E2
Length = 568
Score = 127 (49.8 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 61/251 (24%), Positives = 117/251 (46%)
Query: 20 NAITAQGMK-AFAGLINLVKLD-LERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 77
NAI A K + ++ +LD + T + +L+G L +++ N +D+
Sbjct: 54 NAIKATLNKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYLNNIDTLILNNNKITDLN 113
Query: 78 PLSGLTNLKSLQISCSKVTD-SGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYL 136
L+GL+ L+ L+ + ++++D S +A + + L+ + +L +
Sbjct: 114 SLAGLSKLRILEANDNQLSDISALANVTSLHQLRLAGNQ--------IKQLNGVSNL--I 163
Query: 137 NLNRCQLSDDGCEKFSKIGSLK-VLNLG--FNEITDECLVHLKGLTNLESLNLDSCGIGD 193
NL +LS++ S + LK ++ LG +N+I+D L + GL L L D+ I D
Sbjct: 164 NLETIELSNNQITDISPVSGLKNLIGLGIDYNDISD--LSPIAGLAKLSHLTADNNQISD 221
Query: 194 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD-GSLRKLAGLSS 252
L ++ L ++ + L Q+ S + ++ L NL + L+ ISD SL+ L +
Sbjct: 222 --LSPISSLGAMEIMRLDKNQI--SDVTPIANLANLSYVFLAENQISDISSLQPLFNSPN 277
Query: 253 LKSLNLDARQI 263
+ LD ++I
Sbjct: 278 FFGITLDNQKI 288
>UNIPROTKB|F1PGX0 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0021954 "central nervous
system neuron development" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:AAEX03016347
ProteinModelPortal:F1PGX0 Ensembl:ENSCAFT00000028688 Uniprot:F1PGX0
Length = 620
Score = 124 (48.7 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 66/251 (26%), Positives = 103/251 (41%)
Query: 20 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNL---KGLMKLESLNIKWCNCITDSDM 76
N ++A AF L +L L L R R+ L+ L GL L L+I + D
Sbjct: 105 NIVSAVEPGAFNNLFSLRTLGL-RSNRLK--LIPLGVFTGLSNLTKLDISENKIVILLDY 161
Query: 77 KPLSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYL 136
L NLKSL++ + + E C +T+ ++LS L SL L
Sbjct: 162 M-FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHSLIVL 220
Query: 137 NLNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNLESLNLDSCGIG 192
L ++ F ++ LKVL + + +T CL GL NL SL++ C +
Sbjct: 221 RLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLY---GL-NLTSLSITHCNLT 276
Query: 193 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSS 252
+ + L L+ L LS +G+ L L L+ I L ++ GL+
Sbjct: 277 AVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 336
Query: 253 LKSLNLDARQI 263
L+ LN+ Q+
Sbjct: 337 LRVLNVSGNQL 347
Score = 46 (21.3 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 346 GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 381
GL L LNVS +++T+ + NL +L L+S
Sbjct: 333 GLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDS 368
>TAIR|locus:2125527 [details] [associations]
symbol:GRH1 "AT4G03190" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0045014 "negative
regulation of transcription by glucose" evidence=TAS] [GO:0010011
"auxin binding" evidence=IGI] [GO:0009733 "response to auxin
stimulus" evidence=IMP] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IPI] [GO:0048589 "developmental growth"
evidence=IGI] [GO:0002237 "response to molecule of bacterial
origin" evidence=IEP;RCA] [GO:0010152 "pollen maturation"
evidence=IGI] [GO:0048443 "stamen development" evidence=IGI;RCA]
[GO:0000271 "polysaccharide biosynthetic process" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009825
"multidimensional cell growth" evidence=RCA] [GO:0009932 "cell tip
growth" evidence=RCA] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA] [GO:0010817 "regulation of hormone levels"
evidence=RCA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=RCA] [GO:0048767 "root hair
elongation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006952 GO:GO:0009734 GO:GO:0048443 GO:GO:0010152
GO:GO:0010011 HOGENOM:HOG000239805 GO:GO:0000822 GO:GO:0002237
GO:GO:0004842 GO:GO:0045014 EMBL:AL161496 EMBL:AC005275
GO:GO:0043224 EMBL:AF291816 EMBL:AY045799 EMBL:AY150427
IPI:IPI00536129 PIR:E85040 RefSeq:NP_567255.1 UniGene:At.24291
UniGene:At.69891 ProteinModelPortal:Q9ZR12 SMR:Q9ZR12
DIP:DIP-34607N IntAct:Q9ZR12 STRING:Q9ZR12 PaxDb:Q9ZR12
PRIDE:Q9ZR12 EnsemblPlants:AT4G03190.1 GeneID:828045
KEGG:ath:AT4G03190 TAIR:At4g03190 eggNOG:NOG324137
InParanoid:Q9ZR12 OMA:RECIVED PhylomeDB:Q9ZR12
ProtClustDB:CLSN2689313 Genevestigator:Q9ZR12 Uniprot:Q9ZR12
Length = 585
Score = 89 (36.4 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 36/118 (30%), Positives = 57/118 (48%)
Query: 152 SKIGSLKVLNLGFNEITDECLVHLKG-LTNLESLNLDSC-GIGDEGLVNLTGLC-NLKCL 208
+K SL+ + + +TDECL + + + L L SC G +G+ + C NL+ L
Sbjct: 98 AKSSSLEEIRMKRMVVTDECLEKIAASFKDFKVLVLTSCEGFSTDGIAAIAATCRNLRVL 157
Query: 209 ELSDTQVGSSGLRHLS----GLTNLESINLSF--TGISDGSLRKLAGLS-SLKSLNLD 259
EL + V G LS T+L S++ S + + L +L S +LKSL L+
Sbjct: 158 ELRECIVEDLGGDWLSYFPESSTSLVSLDFSCLDSEVKISDLERLVSRSPNLKSLKLN 215
Score = 83 (34.3 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 33/115 (28%), Positives = 49/115 (42%)
Query: 289 DSG-AAYLRNFKNLRSLEICGGGLTDAGVKHIKDXXXXXXXXXXXXXXXTDKTLE-LISG 346
D G A ++LR L + G L+D K+I +D L L+SG
Sbjct: 417 DKGFKAIAEGCRDLRRLSV-SGLLSDKAFKYIGKHAKKVRMLSIAFAGDSDLMLHHLLSG 475
Query: 347 LTGLVSLNVSNSRI-TSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 400
L L + + +A L H L+ +RSL + SC V+ K L S+ +P L
Sbjct: 476 CESLKKLEIRDCPFGDTALLEHAAKLETMRSLWMSSCFVSFGACKLL-SQKMPRL 529
>ZFIN|ZDB-GENE-050208-711 [details] [associations]
symbol:si:ch211-213a13.5 "si:ch211-213a13.5"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-050208-711
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR007111 PROSITE:PS50837
OrthoDB:EOG4TTGHK GeneTree:ENSGT00690000101934 eggNOG:NOG257844
HOVERGEN:HBG092009 EMBL:BX248395 EMBL:BX664621 IPI:IPI00899095
Ensembl:ENSDART00000138646 Uniprot:F6NX52
Length = 3009
Score = 123 (48.4 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 76/289 (26%), Positives = 121/289 (41%)
Query: 59 KLESLNIKWCNCITDSDMKPLSGL----TNLKSLQISCSKVTDSGIAYXXXXXXXXXXXX 114
K+E + + C +T+ L+ + TNLK L ++ S++ DSG+
Sbjct: 2018 KVEKMKLNNCE-LTEKSCPVLAAVLSSKTNLKELNLNNSRLLDSGVRVIC---------- 2066
Query: 115 EGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH 174
EG C L L L NL S S SLK L+L N + D +
Sbjct: 2067 EGLK-NPVC--ELKIL-KLSKCNLTEESCSALASVLRSDSSSLKDLDLSNNNLQDSGVKL 2122
Query: 175 LK-GL--TNLESLNLDSCGIGDEG---LVNLTGL--CNLKCLELSDTQVGSSGLRHLSGL 226
L GL + LE LNL C I +EG L + G +L L+L G SG++ L+ +
Sbjct: 2123 LTDGLKHSKLEKLNLSDCSISEEGYKALASALGSNPSHLIELDLRGNDPGQSGVQELTDV 2182
Query: 227 TNLESINLSFTGIS-DGSLRKLAGLSS-----LKSLNL-----DARQIXXXXXXXXXXXX 275
L ++ L F + D + + G+ LK LNL D +++
Sbjct: 2183 -KLNNLTLKFLSPAVDEVCQFVKGIVGKNILLLKDLNLSGHKLDFKKVSQLAAVVLDKHC 2241
Query: 276 XXXXXDLFGARITDSG-----AAYLRNFKNLRSLEICGGGLTDAGVKHI 319
L I++ G +A++ N +L+ L++ G L D+G+K+I
Sbjct: 2242 KLNTIQLNNTSISEEGCAALTSAFISNPLHLKELDLSGNKLGDSGLKNI 2290
Score = 62 (26.9 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 343 LISGLTGLVSLNVSNSRITSAGLRHL-KPLKN----LRSLTLESCKVTANDIKRLQSRDL 397
L S + L L++SN+ + +G++ L LKN L L L C ++ K L S
Sbjct: 2607 LSSDSSSLKELDLSNNNLQDSGVKQLWNGLKNNNCTLEKLNLSDCSISEEGYKALASALR 2666
Query: 398 PNL 400
NL
Sbjct: 2667 SNL 2669
Score = 51 (23.0 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 33/125 (26%), Positives = 56/125 (44%)
Query: 287 ITDSG-----AAYLRNFKNLRSLEICGGGLTDAGVKHI----KDXXXXXXXXXXXXXXXT 337
+TD G +A N +LR L++ L D+GV ++ K+ T
Sbjct: 2826 LTDEGCSAVTSALKSNPSHLRELDLSQIKLGDSGVNNLFDLLKNPQSKLDKLHLCGCSIT 2885
Query: 338 DKTLELI-SGLTG----LVSLNVSNSRITSAGLRHLKPL-KN----LRSLTLESCKVTAN 387
++ E++ S L L LN+S ++I + G+ L L K+ L +L+L C +T
Sbjct: 2886 EEKCEILTSALKSNPSHLRELNLSQNQIRNTGVNLLCDLLKDSHCKLETLSLHDCGIT-- 2943
Query: 388 DIKRL 392
D+ L
Sbjct: 2944 DVSSL 2948
Score = 50 (22.7 bits), Expect = 0.00099, Sum P(2) = 0.00098
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 340 TLELISGLTGLVSLNVSNSRITSAGLRHLKPL-KN----LRSLTLESCKVTANDIKRLQS 394
T IS L L++S +++ +GL+++ L +N L + L C ++A K L S
Sbjct: 2262 TSAFISNPLHLKELDLSGNKLGDSGLKNICCLLQNAQCKLEKVKLSDCSISAKGYKALAS 2321
>TAIR|locus:2171963 [details] [associations]
symbol:RLP55 "receptor like protein 55" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006863 "purine nucleobase transport" evidence=RCA]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB012245 IPI:IPI00546089
RefSeq:NP_199389.1 UniGene:At.28004 ProteinModelPortal:Q9FK66
SMR:Q9FK66 PaxDb:Q9FK66 PRIDE:Q9FK66 EnsemblPlants:AT5G45770.1
GeneID:834616 KEGG:ath:AT5G45770 TAIR:At5g45770 eggNOG:NOG280143
HOGENOM:HOG000082852 InParanoid:Q9FK66 OMA:IRISITR PhylomeDB:Q9FK66
ProtClustDB:CLSN2916889 Genevestigator:Q9FK66 Uniprot:Q9FK66
Length = 425
Score = 123 (48.4 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 49/185 (26%), Positives = 87/185 (47%)
Query: 124 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEI-TDECL-VHLKGLTNL 181
L S SA+ S +L NR +LS G +++ +LK L + I T L V L + L
Sbjct: 119 LHSFSAVSS--FLQNNRTKLS--GLF-LARLKNLKTLYISSTPIQTSRRLYVILGNMHKL 173
Query: 182 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 241
SL + + + GL+ + NL+ ++LS+ + S ++ L NL+S+NLS +S
Sbjct: 174 TSLTISNSNL--TGLIPKSFHSNLRYIDLSNNSLKGSIRISITRLKNLKSLNLSHNSLSG 231
Query: 242 GSLRKLAGLSSLKSLNLDARQIXXXXXXXXXXXXXXXXXDLFGARITDSGAAYLRNFKNL 301
K+ L+ LK+L+L + ++ DL ++ + ++ KNL
Sbjct: 232 QIPNKIKSLTFLKNLSLASNKLSGTIPNSLSSISELTHLDLSMNQLNGTVPSFFSEMKNL 291
Query: 302 RSLEI 306
+ L +
Sbjct: 292 KHLNL 296
>UNIPROTKB|Q96JA1 [details] [associations]
symbol:LRIG1 "Leucine-rich repeats and immunoglobulin-like
domains protein 1" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CleanEx:HS_LIG1 Pfam:PF01463 EMBL:AF381545 EMBL:AB050468
EMBL:BC071561 EMBL:BC014276 EMBL:AL117666 IPI:IPI00000775
IPI:IPI00470372 PIR:T17346 RefSeq:NP_056356.2 UniGene:Hs.518055
ProteinModelPortal:Q96JA1 SMR:Q96JA1 IntAct:Q96JA1 STRING:Q96JA1
PhosphoSite:Q96JA1 DMDM:143811415 PaxDb:Q96JA1 PRIDE:Q96JA1
Ensembl:ENST00000273261 Ensembl:ENST00000383703 GeneID:26018
KEGG:hsa:26018 UCSC:uc003dmw.3 UCSC:uc010hoa.3 CTD:26018
GeneCards:GC03M066511 H-InvDB:HIX0003431 HGNC:HGNC:17360 MIM:608868
neXtProt:NX_Q96JA1 PharmGKB:PA38450 HOGENOM:HOG000113380
HOVERGEN:HBG052353 InParanoid:Q96JA1 OMA:ESNGVCP OrthoDB:EOG48PMJN
PhylomeDB:Q96JA1 ChiTaRS:LRIG1 GenomeRNAi:26018 NextBio:47784
Bgee:Q96JA1 CleanEx:HS_LRIG1 Genevestigator:Q96JA1
GermOnline:ENSG00000144749 Uniprot:Q96JA1
Length = 1093
Score = 128 (50.1 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 67/248 (27%), Positives = 102/248 (41%)
Query: 20 NAITAQGMKAFAGLINLVKLDLERCT-RIHGGLVNLKGLMKLESLNIKWCNC--ITDSDM 76
N IT ++AF L L +LDL R R+ GL +GL LE L ++ N +TD
Sbjct: 198 NRITQLPVRAFK-LPRLTQLDLNRNRIRLIEGLT-FQGLNSLEVLKLQRNNISKLTDGAF 255
Query: 77 KPLSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCP-VTAACLDSLSALGSLFY 135
LS + ++ L+ + +SG Y + L L
Sbjct: 256 WGLSKM-HVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSIARIHRKGWSFCQKLHELV- 313
Query: 136 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS---CGIG 192
L+ N D+ E +++ SL VL L N I+ KGL +L L+LD G
Sbjct: 314 LSFNNLTRLDE--ESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRVLDLDHNEISGTI 371
Query: 193 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSS 252
++ +GL +L L L ++ S R SGL LE +NL I + +
Sbjct: 372 EDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNLGGNAIRSVQFDAFVKMKN 431
Query: 253 LKSLNLDA 260
LK L++ +
Sbjct: 432 LKELHISS 439
>ZFIN|ZDB-GENE-070912-120 [details] [associations]
symbol:si:ch211-156p11.1 "si:ch211-156p11.1"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-070912-120
GO:GO:0005524 InterPro:IPR007111 PROSITE:PS50837
GeneTree:ENSGT00690000101971 EMBL:BX927329 EMBL:CR936376
IPI:IPI00868161 Ensembl:ENSDART00000105988 Bgee:F1R8I8
Uniprot:F1R8I8
Length = 871
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 74/265 (27%), Positives = 120/265 (45%)
Query: 35 NLVKLDLERCTRIHGGLVNLKGLMK-----LESLNIKWCNC-ITDSDMKPL-SGLTN--- 84
+L +LDL + ++ G+ NL L+K LE LN+ C C IT + L S L +
Sbjct: 620 HLRELDLSQ-NKLESGVKNLSDLLKNHQCKLEKLNL--CKCSITKEQCEILTSALKSNPS 676
Query: 85 -LKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLNLNRCQL 143
L+ L +S +++ ++G+ C V DS L +L L+ C++
Sbjct: 677 YLRELDLSENQIRNTGLNLL-------------CDVLK---DSHCRLQTL---RLSSCEM 717
Query: 144 SDDGCEKF-----SKIGSLKVLNLGFNEITDECLVHLKGLT-----NLESLNLDSCGIGD 193
+D+ C S L+ LNL +N++ D + +L L LE L+L +C I +
Sbjct: 718 TDEACSAVTSALKSNPSHLRELNLSYNKLGDSGVKNLSYLLMKPQFKLEKLHLCNCSITE 777
Query: 194 EGLVNLTGLC-----NLKCLELSDTQVGSSGLRHLSGLT-----NLESINLSFTGISDGS 243
E V LT +L+ L LS ++ SG+++LS L LE ++L I++
Sbjct: 778 EQCVILTSALKSNPSHLRELNLSCNELADSGVKNLSDLLMKPQFRLEKLHLYKCSITEKQ 837
Query: 244 LRKLAGL-----SSLKSLNLDARQI 263
+ L S L+ LNL QI
Sbjct: 838 CKILTSALKSNPSHLRELNLSENQI 862
>TAIR|locus:2025222 [details] [associations]
symbol:SKP2B "AT1G77000" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0010286 "heat acclimation" evidence=IEP;RCA] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IMP] [GO:1901332 "negative regulation of lateral root
development" evidence=IMP] InterPro:IPR001810 Pfam:PF00646
PROSITE:PS50181 EMBL:CP002684 GenomeReviews:CT485782_GR
EMBL:AC002291 InterPro:IPR006553 SMART:SM00367 GO:GO:0010286
GO:GO:0051603 eggNOG:NOG257455 HOGENOM:HOG000238537
ProtClustDB:CLSN2687892 EMBL:BT024747 EMBL:AY087441 EMBL:AK117866
EMBL:AK175607 EMBL:AK175925 IPI:IPI00520157 PIR:A96799
RefSeq:NP_001185415.1 RefSeq:NP_565147.1 UniGene:At.28008
ProteinModelPortal:O49286 SMR:O49286 STRING:O49286
EnsemblPlants:AT1G77000.1 EnsemblPlants:AT1G77000.2 GeneID:844036
KEGG:ath:AT1G77000 TAIR:At1g77000 InParanoid:O49286 KO:K03875
OMA:VALANRC PhylomeDB:O49286 Genevestigator:O49286 GO:GO:1901332
Uniprot:O49286
Length = 360
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 46/133 (34%), Positives = 66/133 (49%)
Query: 136 LNLNRCQLSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVHL-KGLTNLESLNLDSC-GI 191
L ++ QL D+ E + L+ L+L ++ITD L L +G TNL LNL C
Sbjct: 97 LRQDKPQLEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSF 156
Query: 192 GDEGLVNLTGLCN-LKCLELSDT--QVGSSGLRHLSGLTN-LESINLSFT-GISDGSLRK 246
D L +LT C LK L L V + L+ + N L+S+NL + ISD +
Sbjct: 157 SDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMS 216
Query: 247 LA-GLSSLKSLNL 258
LA G L++L+L
Sbjct: 217 LAYGCPDLRTLDL 229
>UNIPROTKB|F1MT22 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048839 "inner ear development" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:FNPHFKE EMBL:DAAA02012288 EMBL:DAAA02012284 EMBL:DAAA02012285
EMBL:DAAA02012286 EMBL:DAAA02012287 IPI:IPI00688410
UniGene:Bt.94743 ProteinModelPortal:F1MT22
Ensembl:ENSBTAT00000017631 NextBio:20873048 Uniprot:F1MT22
Length = 907
Score = 125 (49.1 bits), Expect = 0.00017, P = 0.00017
Identities = 64/247 (25%), Positives = 106/247 (42%)
Query: 20 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 79
NA+T AFAGL +L L L+ L+ L L+SL + N I+
Sbjct: 100 NALTYIPKGAFAGLYSLKVLMLQNNHLRQVPTEALQNLRSLQSLRLD-ANRISSVPPSCF 158
Query: 80 SGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLNLN 139
SGL +L+ L + + +T+ + + + L SL L+L+
Sbjct: 159 SGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLH 218
Query: 140 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG---DEGL 196
++ G + F + SL+ L+L +N + DE ++ L+NL+ L S I ++
Sbjct: 219 NNRIHSLGKKCFDGLHSLETLDLNYNNL-DEFPTAVRTLSNLKELGFHSNNIKSIPEKAF 277
Query: 197 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 256
V L + + VG S +HL L L ++N + I++ L G +SL+SL
Sbjct: 278 VGNPSLITIHFYDNPIQLVGRSAFQHLPELRTL-TLN-GASQITE--FPDLTGTASLESL 333
Query: 257 NLDARQI 263
L QI
Sbjct: 334 TLTGAQI 340
>TAIR|locus:2176397 [details] [associations]
symbol:AT5G22320 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0009560 "embryo sac egg cell differentiation" evidence=RCA]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG4886 InterPro:IPR025875
Pfam:PF12799 HSSP:P25147 EMBL:AB007651 EMBL:AY056427 EMBL:AY090323
IPI:IPI00547435 RefSeq:NP_568416.1 UniGene:At.7358
ProteinModelPortal:Q9FMS0 SMR:Q9FMS0 STRING:Q9FMS0 PaxDb:Q9FMS0
PRIDE:Q9FMS0 EnsemblPlants:AT5G22320.1 GeneID:832292
KEGG:ath:AT5G22320 TAIR:At5g22320 HOGENOM:HOG000006314
InParanoid:Q9FMS0 OMA:NEISSIC PhylomeDB:Q9FMS0
ProtClustDB:CLSN2689839 Genevestigator:Q9FMS0 Uniprot:Q9FMS0
Length = 452
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 67/257 (26%), Positives = 111/257 (43%)
Query: 156 SLKVLNLGFNEITD-ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQ 214
S+K LNLG +TD CL K NLE L+L + D L L NLK L + + +
Sbjct: 20 SVKELNLGHKALTDVSCLSKFK---NLEKLDLRFNNLTD--LQGLKSCVNLKWLSVVENK 74
Query: 215 VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIXXXXXXXXXXX 274
+ S L + LT L +N + S+ +++ L +L++L L+ +I
Sbjct: 75 LQS--LNGIEALTKLTVLNAGKNKLK--SMNEISSLVNLRALILNDNEISSICKLDLLKD 130
Query: 275 XXXXXXDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDXXXXXXXXXXXXX 334
L I++ G + L KNL + L+D +K I
Sbjct: 131 LNSLV--LSRNPISEIGDS-LSKLKNLSKIS-----LSDCRIKAIGSSLKSCSDLKELRL 182
Query: 335 XXTD-KTLELISGLTG-LVSLNVSNSRITS-AGLRHLKPLKNLRSLTLESCKVTAND--I 389
+ K L + L++L+V N+ IT +GL L L LR+L + ++ ND
Sbjct: 183 ANNEIKALPAELAVNKRLLNLDVGNNVITQLSGLEVLGTLSCLRNLNIRGNPISDNDKSA 242
Query: 390 KRLQSRDLPNLVSFRPE 406
K++++ LP++ F +
Sbjct: 243 KKVRTLLLPSVNVFNAQ 259
>TAIR|locus:2154709 [details] [associations]
symbol:PSKR2 "phytosylfokine-alpha receptor 2"
species:3702 "Arabidopsis thaliana" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA;ISS] [GO:0004713 "protein tyrosine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM;IDA]
[GO:0006468 "protein phosphorylation" evidence=IEA;ISS] [GO:0007169
"transmembrane receptor protein tyrosine kinase signaling pathway"
evidence=ISS] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0001653 "peptide
receptor activity" evidence=IMP] [GO:0009611 "response to wounding"
evidence=IGI] [GO:0009507 "chloroplast" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 GO:GO:0009611 SUPFAM:SSF56112 GO:GO:0004674
eggNOG:COG4886 Gene3D:2.60.120.200 InterPro:IPR013320
InterPro:IPR025875 Pfam:PF12799 EMBL:AB007644 HOGENOM:HOG000116551
InterPro:IPR013210 Pfam:PF08263 GO:GO:0001653 EMBL:AY064019
EMBL:AY091180 IPI:IPI00522574 RefSeq:NP_200200.1 UniGene:At.27101
ProteinModelPortal:Q9FN37 SMR:Q9FN37 PRIDE:Q9FN37
EnsemblPlants:AT5G53890.1 GeneID:835470 KEGG:ath:AT5G53890
GeneFarm:609 TAIR:At5g53890 InParanoid:Q9FN37 OMA:HKVCEPN
PhylomeDB:Q9FN37 ProtClustDB:CLSN2686570 Genevestigator:Q9FN37
Uniprot:Q9FN37
Length = 1036
Score = 130 (50.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 65/237 (27%), Positives = 110/237 (46%)
Query: 28 KAFAGLINLVKLDLERCTRIHGGL-VNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 86
K+ L L LDL R ++ G + + L +L+ L++ N ++ S + +SGL ++
Sbjct: 82 KSLGELTELRVLDLSR-NQLKGEVPAEISKLEQLQVLDLSH-NLLSGSVLGVVSGLKLIQ 139
Query: 87 SLQISCS----KVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLNLNRCQ 142
SL IS + K++D G+ EG C S S + L++NR
Sbjct: 140 SLNISSNSLSGKLSDVGVFPGLVMLNVSNNLFEGEIHPELC--SSSGGIQVLDLSMNRLV 197
Query: 143 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL 202
+ DG SK S++ L++ N +T + +L + LE L+L + E NL+ L
Sbjct: 198 GNLDGLYNCSK--SIQQLHIDSNRLTGQLPDYLYSIRELEQLSLSGNYLSGELSKNLSNL 255
Query: 203 CNLKCLELSDTQVGSSGLRHLSG-LTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 258
LK L +S+ + S + + G LT LE +++S S L+ S L+ L+L
Sbjct: 256 SGLKSLLISENRF-SDVIPDVFGNLTQLEHLDVSSNKFSGRFPPSLSQCSKLRVLDL 311
Score = 40 (19.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 344 ISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAND-----IKRLQSRD-L 397
I + L ++ SN+ +T A + LKNL L + ++T + +KR +S + L
Sbjct: 470 IGKMESLFYIDFSNNTLTGAIPVAITELKNLIRLNGTASQMTDSSGIPLYVKRNKSSNGL 529
Query: 398 P-NLVS-FRP 405
P N VS F P
Sbjct: 530 PYNQVSRFPP 539
>UNIPROTKB|F1MBT2 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:DAAA02052480
IPI:IPI01003440 Ensembl:ENSBTAT00000031490 Uniprot:F1MBT2
Length = 614
Score = 119 (46.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 65/251 (25%), Positives = 101/251 (40%)
Query: 20 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNL---KGLMKLESLNIKWCNCITDSDM 76
N ++A AF L NL L L R R+ L+ L GL L L+I + D
Sbjct: 99 NIVSAVEPGAFNNLFNLRTLGL-RSNRLK--LIPLGVFTGLSNLTKLDISENKIVILLDY 155
Query: 77 KPLSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYL 136
L NLKSL++ + + E C +T+ ++LS L L L
Sbjct: 156 M-FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVL 214
Query: 137 NLNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNLESLNLDSCGIG 192
L ++ F ++ LKVL + + +T CL GL NL SL++ C +
Sbjct: 215 RLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLY---GL-NLTSLSITHCNLT 270
Query: 193 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSS 252
+ + L L+ L LS + + L L L+ I L ++ GL+
Sbjct: 271 AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 330
Query: 253 LKSLNLDARQI 263
L+ LN+ Q+
Sbjct: 331 LRVLNVSGNQL 341
Score = 46 (21.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 346 GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 381
GL L LNVS +++T+ + NL +L L+S
Sbjct: 327 GLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDS 362
>UNIPROTKB|F1SJ87 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:CT954219
Ensembl:ENSSSCT00000002097 Uniprot:F1SJ87
Length = 620
Score = 119 (46.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 65/251 (25%), Positives = 101/251 (40%)
Query: 20 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNL---KGLMKLESLNIKWCNCITDSDM 76
N ++A AF L NL L L R R+ L+ L GL L L+I + D
Sbjct: 105 NIVSAVEPGAFNNLFNLRTLGL-RSNRLK--LIPLGVFTGLSNLTKLDISENKIVILLDY 161
Query: 77 KPLSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYL 136
L NLKSL++ + + E C +T+ ++LS L L L
Sbjct: 162 M-FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVL 220
Query: 137 NLNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNLESLNLDSCGIG 192
L ++ F ++ LKVL + + +T CL GL NL SL++ C +
Sbjct: 221 RLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLY---GL-NLTSLSITHCNLT 276
Query: 193 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSS 252
+ + L L+ L LS + + L L L+ I L ++ GL+
Sbjct: 277 AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 336
Query: 253 LKSLNLDARQI 263
L+ LN+ Q+
Sbjct: 337 LRVLNVSGNQL 347
Score = 46 (21.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 346 GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 381
GL L LNVS +++T+ + NL +L L+S
Sbjct: 333 GLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDS 368
>UNIPROTKB|Q720D2 [details] [associations]
symbol:LMOf2365_1307 "Putative uncharacterized protein"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] eggNOG:COG4886 EMBL:AE017262 GenomeReviews:AE017262_GR
InterPro:IPR019931 TIGRFAMs:TIGR01167 RefSeq:YP_013905.1
ProteinModelPortal:Q720D2 STRING:Q720D2 GeneID:2799616
KEGG:lmf:LMOf2365_1307 PATRIC:20323849 HOGENOM:HOG000238672
OMA:GAITDIM ProtClustDB:CLSK563946 Uniprot:Q720D2
Length = 608
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 40/131 (30%), Positives = 65/131 (49%)
Query: 130 LGSLFYLNLNRCQLSD-DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 188
+ SL Y+ L ++D G E I L + N+ + GL+NLE L +
Sbjct: 71 MDSLTYITLANINVTDLTGIEYAHNIKDLTINNIHATNYNP-----ISGLSNLERLRIMG 125
Query: 189 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG-ISDGSLRKL 247
+ + + NL+GL +L L++S + S L ++ L + SI+LS+ G I+D + L
Sbjct: 126 TDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITD--IMPL 183
Query: 248 AGLSSLKSLNL 258
L LKSLN+
Sbjct: 184 KTLPELKSLNI 194
>ZFIN|ZDB-GENE-030131-7850 [details] [associations]
symbol:anp32a "acidic (leucine-rich) nuclear
phosphoprotein 32 family, member A" species:7955 "Danio rerio"
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISS] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISS] [GO:0006913 "nucleocytoplasmic
transport" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-030131-7850
GeneTree:ENSGT00560000077130 InterPro:IPR003603 SMART:SM00446
InterPro:IPR025875 Pfam:PF12799 EMBL:BX914196 IPI:IPI00932297
Ensembl:ENSDART00000114041 ArrayExpress:F1QTN7 Bgee:F1QTN7
Uniprot:F1QTN7
Length = 263
Score = 116 (45.9 bits), Expect = 0.00023, P = 0.00023
Identities = 39/99 (39%), Positives = 54/99 (54%)
Query: 167 ITDECLVH---LKGLTN-LESLN-LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 221
+ D C + ++GLT+ E L L + +G + NL L LK LELSD ++ S GL
Sbjct: 32 VLDNCRSNEGKIEGLTDEFEELEFLSTINVGLTSVTNLPKLNKLKKLELSDNRI-SGGLE 90
Query: 222 HLSG-LTNLESINLSFTGISD-GSLRKLAGLSSLKSLNL 258
L+G NL +NLS I D ++ L L SLKSL+L
Sbjct: 91 VLAGKCPNLTHLNLSGNKIKDLSTIEPLKKLESLKSLDL 129
>WB|WBGene00006366 [details] [associations]
symbol:sym-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0005615 "extracellular space" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009792 GO:GO:0005615
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00690000101816
EMBL:Z79598 EMBL:AJ242473 PIR:T19939 RefSeq:NP_510426.1
UniGene:Cel.8136 ProteinModelPortal:G5EFP4 SMR:G5EFP4
EnsemblMetazoa:C44H4.3 GeneID:181555 KEGG:cel:CELE_C44H4.3
CTD:181555 WormBase:C44H4.3 OMA:NMERFWR NextBio:914424
Uniprot:G5EFP4
Length = 680
Score = 123 (48.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 62/250 (24%), Positives = 108/250 (43%)
Query: 19 NNAITAQGMKAFAGL-INLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDM 76
N I G KAF L I + L R +IH L+ +M+ SL+ N + +
Sbjct: 69 NADIIEVGPKAFKTLRIKKLILSNNRIEKIHDHAFTGLENVMQELSLSE---NNLKEVPT 125
Query: 77 KPLSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGC-PVTAACLDSLSALG-SLF 134
L+GL L L + C+K+ ++ GC + + D+ + + SL
Sbjct: 126 SALAGLRVLNILSLKCNKI-ENITTKAFVNMTSLIDVNLGCNQICSMAADTFANVKMSLQ 184
Query: 135 YLNL-NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 193
L L N C +++ + + +L L++ +N+I LT+L L+L+ I +
Sbjct: 185 NLILDNNC-MTEFPSKAVRNMNNLIALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNISE 243
Query: 194 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 253
L NL L L++ + + L L+ ++LSF +D + GL S+
Sbjct: 244 IKGGALQNTPNLHYLYLNENNLQTLDNGVLEQFKQLQVLDLSFNNFTDITKEMFEGLESI 303
Query: 254 KSLNLDARQI 263
+ LNLD+ +I
Sbjct: 304 QHLNLDSNRI 313
Score = 42 (19.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 337 TDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 392
T+ + + + G L +++SN+ I L NL +L L + K+ + K L
Sbjct: 337 TEVSQQTLKGAPFLRMVSLSNNNIREVHELSFDHLPNLHTLDLANNKIMSLQNKSL 392
>TAIR|locus:2204350 [details] [associations]
symbol:CLV1 "AT1G75820" species:3702 "Arabidopsis
thaliana" [GO:0004674 "protein serine/threonine kinase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006468 "protein
phosphorylation" evidence=IEA;ISS] [GO:0007169 "transmembrane
receptor protein tyrosine kinase signaling pathway" evidence=ISS]
[GO:0016301 "kinase activity" evidence=ISS] [GO:0007172 "signal
complex assembly" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0033612 "receptor
serine/threonine kinase binding" evidence=IPI] [GO:0043621 "protein
self-association" evidence=IDA] [GO:0004702 "receptor signaling
protein serine/threonine kinase activity" evidence=ISS] [GO:0009934
"regulation of meristem structural organization" evidence=IMP]
[GO:0016020 "membrane" evidence=ISS] [GO:0042802 "identical protein
binding" evidence=IPI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0030154 GO:GO:0032940 GO:GO:0016020
SUPFAM:SSF56112 eggNOG:COG4886 EMBL:AC007396 GO:GO:0043621
BRENDA:2.7.10.2 GO:GO:0009887 KO:K00924 GO:GO:0004702
InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000116551 GO:GO:0009934
InterPro:IPR013210 Pfam:PF08263 GO:GO:0048833 EMBL:U96879
EMBL:AF049870 EMBL:BX815769 EMBL:AK221523 IPI:IPI00522916
RefSeq:NP_177710.1 UniGene:At.25465 ProteinModelPortal:Q9SYQ8
SMR:Q9SYQ8 IntAct:Q9SYQ8 MINT:MINT-98628 STRING:Q9SYQ8 PaxDb:Q9SYQ8
PRIDE:Q9SYQ8 EnsemblPlants:AT1G75820.1 GeneID:843915
KEGG:ath:AT1G75820 GeneFarm:641 TAIR:At1g75820 InParanoid:Q9SYQ8
OMA:QFLVFNE PhylomeDB:Q9SYQ8 ProtClustDB:CLSN2682706
Genevestigator:Q9SYQ8 GermOnline:AT1G75820 GO:GO:0010080
Uniprot:Q9SYQ8
Length = 980
Score = 119 (46.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 39/135 (28%), Positives = 65/135 (48%)
Query: 125 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLES 183
+S + SL YL LN LS S++ +L+ + +G+ N T GLT LE
Sbjct: 186 ESYGDIQSLEYLGLNGAGLSGKSPAFLSRLKNLREMYIGYYNSYTGGVPPEFGGLTKLEI 245
Query: 184 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS 243
L++ SC + E +L+ L +L L L + LSGL +L+S++LS ++
Sbjct: 246 LDMASCTLTGEIPTSLSNLKHLHTLFLHINNLTGHIPPELSGLVSLKSLDLSINQLTGEI 305
Query: 244 LRKLAGLSSLKSLNL 258
+ L ++ +NL
Sbjct: 306 PQSFINLGNITLINL 320
Score = 50 (22.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 12/44 (27%), Positives = 26/44 (59%)
Query: 344 ISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAN 387
IS + L+S+++S +RI + + +KNL +L + ++T +
Sbjct: 524 ISRCSTLISVDLSRNRINGEIPKGINNVKNLGTLNISGNQLTGS 567
>UNIPROTKB|A4KA30 [details] [associations]
symbol:TIR1 "Transport inhibitor response 1" species:3635
"Gossypium hirsutum" [GO:0000822 "inositol hexakisphosphate
binding" evidence=ISS] [GO:0009734 "auxin mediated signaling
pathway" evidence=ISS] InterPro:IPR001810 SMART:SM00256
GO:GO:0009734 GO:GO:0000822 EMBL:DQ659621 ProteinModelPortal:A4KA30
SMR:A4KA30 Uniprot:A4KA30
Length = 586
Score = 101 (40.6 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 36/104 (34%), Positives = 51/104 (49%)
Query: 167 ITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLTGLC-NLKCLELSDTQVGSSGLRHL 223
+TDE L + K N + L L SC G +GL + C NLK L+L D +V L
Sbjct: 117 VTDESLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAASCKNLKELDLRDCEVDDLSAHWL 176
Query: 224 SGL----TNLESINLSFTGISDGSLRKLAGL----SSLKSLNLD 259
S T+L S+N+S G + S L L ++LK+L L+
Sbjct: 177 SHFPETYTSLVSLNISCLGSDEASFSALERLVHRCTNLKTLRLN 220
Score = 64 (27.6 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 31/115 (26%), Positives = 49/115 (42%)
Query: 289 DSG-AAYLRNFKNLRSLEICGGGLTDAGVKHIKDXXXXXXXXXXXXXXXTDKTLE-LISG 346
D G A ++ K+LR L + G LTD ++I +D L ++SG
Sbjct: 422 DVGFGAIVQYCKDLRRLSL-SGLLTDRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVLSG 480
Query: 347 LTGLVSLNVSNSRI-TSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 400
L L + + A L + L+ +RSL + SC V+ K L + +P L
Sbjct: 481 CESLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCAVSFAACKLLGQK-MPRL 534
>UNIPROTKB|Q96FE5 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005154 "epidermal growth factor receptor binding"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IEA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0050770 "regulation of
axonogenesis" evidence=TAS] [GO:0050771 "negative regulation of
axonogenesis" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0048011 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
EMBL:CH471136 GO:GO:0043491 GO:GO:0031175 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0050771
GO:GO:0021954 MEROPS:I43.001 GO:GO:0048715 Orphanet:862
OrthoDB:EOG40S0F8 CTD:84894 HOVERGEN:HBG057546 OMA:RIRDRKP
EMBL:AY324320 EMBL:AY324322 EMBL:AY324323 EMBL:AY358284
EMBL:AK027500 EMBL:AK291363 EMBL:BC011057 EMBL:BC068558
EMBL:AL834260 IPI:IPI00465325 IPI:IPI00795326 RefSeq:NP_116197.4
UniGene:Hs.656765 UniGene:Hs.736275 PDB:2ID5 PDBsum:2ID5
ProteinModelPortal:Q96FE5 SMR:Q96FE5 IntAct:Q96FE5
MINT:MINT-1378183 STRING:Q96FE5 PhosphoSite:Q96FE5 PaxDb:Q96FE5
PRIDE:Q96FE5 Ensembl:ENST00000355300 Ensembl:ENST00000561030
GeneID:84894 KEGG:hsa:84894 UCSC:uc002bct.1 GeneCards:GC15M077905
H-InvDB:HIX0012466 HGNC:HGNC:21205 HPA:HPA011630 MIM:609791
neXtProt:NX_Q96FE5 PharmGKB:PA162394087 InParanoid:Q96FE5
EvolutionaryTrace:Q96FE5 GenomeRNAi:84894 NextBio:75236 Bgee:Q96FE5
CleanEx:HS_LINGO1 Genevestigator:Q96FE5 Uniprot:Q96FE5
Length = 620
Score = 119 (46.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 65/251 (25%), Positives = 101/251 (40%)
Query: 20 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNL---KGLMKLESLNIKWCNCITDSDM 76
N ++A AF L NL L L R R+ L+ L GL L L+I + D
Sbjct: 105 NIVSAVEPGAFNNLFNLRTLGL-RSNRLK--LIPLGVFTGLSNLTKLDISENKIVILLDY 161
Query: 77 KPLSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYL 136
L NLKSL++ + + E C +T+ ++LS L L L
Sbjct: 162 M-FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVL 220
Query: 137 NLNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNLESLNLDSCGIG 192
L ++ F ++ LKVL + + +T CL GL NL SL++ C +
Sbjct: 221 RLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLY---GL-NLTSLSITHCNLT 276
Query: 193 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSS 252
+ + L L+ L LS + + L L L+ I L ++ GL+
Sbjct: 277 AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 336
Query: 253 LKSLNLDARQI 263
L+ LN+ Q+
Sbjct: 337 LRVLNVSGNQL 347
Score = 45 (20.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 346 GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 381
GL L LNVS +++T+ + NL +L L+S
Sbjct: 333 GLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDS 368
>UNIPROTKB|Q722U0 [details] [associations]
symbol:LMOf2365_0639 "LPXTG-motif cell wall anchor domain
protein" species:265669 "Listeria monocytogenes serotype 4b str.
F2365" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00746 GO:GO:0005618
EMBL:AE017262 GenomeReviews:AE017262_GR InterPro:IPR019948
InterPro:IPR019931 TIGRFAMs:TIGR01167 PROSITE:PS50847
InterPro:IPR000601 SUPFAM:SSF49299 HOGENOM:HOG000238672
ProtClustDB:CLSK563946 RefSeq:YP_013244.1 ProteinModelPortal:Q722U0
STRING:Q722U0 GeneID:2798263 KEGG:lmf:LMOf2365_0639 PATRIC:20322481
eggNOG:NOG148690 OMA:DHYFDID Uniprot:Q722U0
Length = 589
Score = 121 (47.7 bits), Expect = 0.00026, P = 0.00026
Identities = 44/140 (31%), Positives = 68/140 (48%)
Query: 71 ITDSDMKPLSGLT---NLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSL 127
I++S + L+GL NL L +S + VTD A G +T L L
Sbjct: 77 ISNSSLTDLTGLDYAHNLTILHLSNTGVTD--YALVAKIPSLTNLSIAGDNLTNDSLPDL 134
Query: 128 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN-EITDECLVHLKGLTNLESLNL 186
+ L ++ LNL+ +L ++ KF+K+ L LNL N IT+ ++ LK + NL +L +
Sbjct: 135 NNLSNITNLNLSPGKLDNNALTKFNKMSKLSYLNLDSNPSITN--IMPLKSIPNLATLFV 192
Query: 187 DSCGIGD-EGLVNLTGLCNL 205
CGI D G+ L +L
Sbjct: 193 QFCGINDFRGIDTFPKLVSL 212
>RGD|1307733 [details] [associations]
symbol:Lgr5 "leucine rich repeat containing G protein coupled
receptor 5" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS50262
PROSITE:PS51450 RGD:1307733 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 EMBL:CH473960
GeneTree:ENSGT00650000092962 CTD:8549 KO:K04308 OMA:FNPHFKE
OrthoDB:EOG46143B IPI:IPI00360187 RefSeq:NP_001100254.1
UniGene:Rn.214063 Ensembl:ENSRNOT00000005814 GeneID:299802
KEGG:rno:299802 UCSC:RGD:1307733 NextBio:645794 Uniprot:D4AC13
Length = 907
Score = 123 (48.4 bits), Expect = 0.00028, P = 0.00028
Identities = 62/245 (25%), Positives = 101/245 (41%)
Query: 20 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 79
NA+T AFAGL +L L L+ L+ L L+SL + N I+
Sbjct: 100 NALTHIPKGAFAGLHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLD-ANHISYVPPSCF 158
Query: 80 SGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLNLN 139
SGL +L+ L + + +TD + + + L SL L+L+
Sbjct: 159 SGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADHAFGNLSSLVVLHLH 218
Query: 140 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 199
++ G + F + SL+ L+L +N + DE +K L+NL+ L S I
Sbjct: 219 NNRIHSLGKKCFDGLHSLETLDLNYNNL-DEFPTAIKTLSNLKELGFHSNNIRSIPERAF 277
Query: 200 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD-GSLRKLAGLSSLKSLNL 258
G +L + D + G+ L L ++ L+ G S L G ++L+SL L
Sbjct: 278 VGNPSLITIHFYDNPIQFVGISAFQHLPELRTLTLN--GASQITEFPDLTGTATLESLTL 335
Query: 259 DARQI 263
+I
Sbjct: 336 TGAKI 340
>UNIPROTKB|F1LRE2 [details] [associations]
symbol:Igfals "Insulin-like growth factor-binding protein
complex acid labile subunit" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
RGD:68429 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 IPI:IPI00202416
OMA:FCGLGEL Ensembl:ENSRNOT00000020233 ArrayExpress:F1LRE2
Uniprot:F1LRE2
Length = 602
Score = 121 (47.7 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 65/247 (26%), Positives = 100/247 (40%)
Query: 20 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNL-KGLMKLESLNIKWCNCITDSDMKP 78
N +T F GL L +LDL R + N+ L +L+ L + N IT +
Sbjct: 203 NKLTYLQPALFCGLGELRELDLSR-NALRSVKANVFVHLPRLQKLYLDR-NLITAVAPRA 260
Query: 79 LSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLD--SLSALGSLFYL 136
G+ L+ L +S ++V +G+ A L + L L L
Sbjct: 261 FLGMKALRWLDLSHNRV--AGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEEL 318
Query: 137 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 196
L ++ G F +G L+VL L N+IT+ + GL N+ +NL +
Sbjct: 319 QLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPE 378
Query: 197 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 256
GL L L L + +G L +GL+ L + L IS + LAGLS L L
Sbjct: 379 RVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLEL 438
Query: 257 NLDARQI 263
+L ++
Sbjct: 439 DLTTNRL 445
Score = 116 (45.9 bits), Expect = 0.00096, P = 0.00096
Identities = 39/138 (28%), Positives = 65/138 (47%)
Query: 126 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 185
+ LG L L LN Q+++ FS + ++ V+NL N + +GL L SL+
Sbjct: 332 TFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLH 391
Query: 186 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 245
L+ +G L GL L+ L L D + S + L+GL+ L ++L+ ++ +
Sbjct: 392 LEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQ 451
Query: 246 KLAGLSSLKSLNLDARQI 263
GL L+ L L Q+
Sbjct: 452 LFQGLGHLEYLLLSYNQL 469
Score = 42 (19.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 11/42 (26%), Positives = 25/42 (59%)
Query: 344 ISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 385
++GL+ L+ L+++ +R+T + + L +L L L ++T
Sbjct: 429 LAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLT 470
>TAIR|locus:2013825 [details] [associations]
symbol:TMK1 "transmembrane kinase 1" species:3702
"Arabidopsis thaliana" [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0004675 "transmembrane receptor protein serine/threonine kinase
activity" evidence=IDA] [GO:0005576 "extracellular region"
evidence=ISS] [GO:0007165 "signal transduction" evidence=IDA]
InterPro:IPR001611 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 PROSITE:PS51450 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005524
GO:GO:0005576 eggNOG:COG0515 SUPFAM:SSF56112 InterPro:IPR003591
SMART:SM00369 EMBL:AC026480 Gene3D:2.60.120.200 InterPro:IPR013320
KO:K00924 GO:GO:0004675 InterPro:IPR013210 Pfam:PF08263 EMBL:L00670
EMBL:FJ708669 EMBL:BT006178 EMBL:AK228659 IPI:IPI00529958
PIR:JQ1674 RefSeq:NP_176789.1 UniGene:At.28076
ProteinModelPortal:P43298 SMR:P43298 IntAct:P43298 STRING:P43298
PaxDb:P43298 PRIDE:P43298 EnsemblPlants:AT1G66150.1 GeneID:842930
KEGG:ath:AT1G66150 GeneFarm:2501 TAIR:At1g66150
HOGENOM:HOG000240631 InParanoid:P43298 OMA:RHSGSDN PhylomeDB:P43298
ProtClustDB:CLSN2715062 Genevestigator:P43298 GermOnline:AT1G66150
Uniprot:P43298
Length = 942
Score = 123 (48.4 bits), Expect = 0.00029, P = 0.00029
Identities = 70/240 (29%), Positives = 106/240 (44%)
Query: 35 NLVKLDLERCTRI---HGGLV-----NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 86
++V +R TRI H GL +L+ L +LE L ++W N + LSGL +L+
Sbjct: 57 HIVCTGTKRVTRIQIGHSGLQGTLSPDLRNLSELERLELQWNNI--SGPVPSLSGLASLQ 114
Query: 87 SLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACL-DSLSALGSLFYLNLNRCQLSD 145
L +S + + P + + +SL +L + N +S
Sbjct: 115 VLMLSNNNFDSIPSDVFQGLTSLQSVEIDNNPFKSWEIPESLRNASALQNFSANSANVSG 174
Query: 146 D--GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI-GD-EGLVNLTG 201
G + L +L+L FN + E + L G + ++SL L+ + GD L N+TG
Sbjct: 175 SLPGFLGPDEFPGLSILHLAFNNLEGELPMSLAG-SQVQSLWLNGQKLTGDITVLQNMTG 233
Query: 202 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINL---SFTGISDGSLRKLAGLSSLKSLNL 258
L K + L + S L SGL LES++L SFTG SL L SLK +NL
Sbjct: 234 L---KEVWLHSNKF-SGPLPDFSGLKELESLSLRDNSFTGPVPASL---LSLESLKVVNL 286
>FB|FBgn0034540 [details] [associations]
symbol:Lrt "Leucine-rich tendon-specific protein"
species:7227 "Drosophila melanogaster" [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:2001282 "negative regulation of muscle cell chemotaxis toward
tendon cell" evidence=IMP] [GO:0005927 "muscle tendon junction"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043234 "protein complex" evidence=IPI] [GO:2001283 "Roundabout
signaling pathway involved in muscle cell chemotaxis toward tendon
cell" evidence=IGI] InterPro:IPR001611 PROSITE:PS51450
EMBL:AE013599 GO:GO:0016021 GO:GO:0005886 GO:GO:0043234
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005927 GeneTree:ENSGT00690000101816 RefSeq:NP_611506.2
UniGene:Dm.22099 ProteinModelPortal:A1ZBX8 SMR:A1ZBX8
EnsemblMetazoa:FBtr0302284 GeneID:37342 KEGG:dme:Dmel_CG11136
UCSC:CG11136-RA CTD:37342 FlyBase:FBgn0034540 eggNOG:NOG299525
InParanoid:A1ZBX8 OMA:PIHCESK OrthoDB:EOG48KPT1 GenomeRNAi:37342
NextBio:803193 Bgee:A1ZBX8 GO:GO:2001282 GO:GO:2001283
Uniprot:A1ZBX8
Length = 808
Score = 122 (48.0 bits), Expect = 0.00031, P = 0.00031
Identities = 52/185 (28%), Positives = 80/185 (43%)
Query: 125 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 184
++LS L +L L+L ++ G F + SL L L N+I+ L LE L
Sbjct: 219 NALSTLSALERLDLANNKIKALGTADFVGLTSLVYLELSNNQISSISQRTFVNLRKLEVL 278
Query: 185 NLDSCGIGD--EGLVNLTGLCNLKCLELSDTQV-GSSGLRHLSGLTNLESINLSFTGISD 241
L +GD + L +L+ +L+ L+L + G + L G+ NLES+NL+ I
Sbjct: 279 KLGGNRLGDYAQSLRSLSQCLSLRQLDLQANNLNGPLSEQTLPGMRNLESLNLNRNLIKS 338
Query: 242 GSLRKLAGLSSLKSLNLDARQIXXXXXXXXXXXXXXXXXDLFGARITDSGAAYLRNFKNL 301
+ LA S L SL+L QI DL I +A L++ L
Sbjct: 339 IQNKALANFSRLVSLSLRHNQIDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRL 398
Query: 302 RSLEI 306
L++
Sbjct: 399 TVLDL 403
>UNIPROTKB|E1C2F8 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0048839 "inner ear development" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:FNPHFKE EMBL:AADN02009847 IPI:IPI00595522
Ensembl:ENSGALT00000016526 Uniprot:E1C2F8
Length = 834
Score = 118 (46.6 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 62/245 (25%), Positives = 98/245 (40%)
Query: 20 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 79
N +T AFAGL +L L L+ L+ L L+SL + N I
Sbjct: 26 NGLTYIPKGAFAGLFSLKVLMLQNNQLRQVPTEALQNLRSLQSLRLD-ANHINYVPPNCF 84
Query: 80 SGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLNLN 139
+GL +L+ L + + +T+ I + + L SL L+L+
Sbjct: 85 NGLVSLRHLWLDDNSLTEIPIQAFRSLPALQAMTLALNKIHYIPDYAFGNLSSLVVLHLH 144
Query: 140 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 199
++ G + F + SL+ L+L +N + DE ++ LTNL+ L S I
Sbjct: 145 NNRIYSLGKKCFDGLHSLETLDLNYNSL-DEFPTAIRTLTNLKELGFHSNNIKSIPERAF 203
Query: 200 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD-GSLRKLAGLSSLKSLNL 258
G +L + D + G L L ++ L+ G S L G +SL+SL L
Sbjct: 204 VGNPSLITIHFYDNPIQLVGKSAFQNLPELRTLTLN--GASQITEFPDLTGTTSLESLTL 261
Query: 259 DARQI 263
QI
Sbjct: 262 TGAQI 266
Score = 48 (22.0 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 344 ISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 379
++G T L SL ++ ++ITS L NL+ L L
Sbjct: 250 LTGTTSLESLTLTGAQITSLPRSACDQLPNLQVLDL 285
>TAIR|locus:2131518 [details] [associations]
symbol:AT4G26540 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM;IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0016301 "kinase activity" evidence=ISS]
[GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0002237 "response
to molecule of bacterial origin" evidence=RCA] [GO:0007165 "signal
transduction" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0048443 "stamen development"
evidence=RCA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF56112 GO:GO:0004674
eggNOG:COG4886 EMBL:AL161565 EMBL:AL022223 HOGENOM:HOG000116551
InterPro:IPR013210 Pfam:PF08263 EMBL:AF436829 EMBL:FJ708754
IPI:IPI00519446 PIR:T05050 RefSeq:NP_567748.5 UniGene:At.20959
ProteinModelPortal:C0LGR3 SMR:C0LGR3 EnsemblPlants:AT4G26540.1
GeneID:828760 KEGG:ath:AT4G26540 GeneFarm:624 TAIR:At4g26540
InParanoid:Q8W556 OMA:KANERPL PhylomeDB:C0LGR3
ProtClustDB:CLSN2927436 Uniprot:C0LGR3
Length = 1091
Score = 123 (48.4 bits), Expect = 0.00035, P = 0.00035
Identities = 61/225 (27%), Positives = 104/225 (46%)
Query: 33 LINLVKLDLERCTRIHGGLVN---LKGLMKLESLNIKWCNCITDSDMK-----P--LSGL 82
L + D+ CT ++ +N L G + E N+K N + S+ + P +SG
Sbjct: 442 LSGFIPPDIGNCTNLYRLRLNGNRLAGSIPSEIGNLKNLNFVDISENRLVGSIPPAISGC 501
Query: 83 TNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLNLNRCQ 142
+L+ L + + ++ S + + +++ + L L LNL + +
Sbjct: 502 ESLEFLDLHTNSLSGSLLGTTLPKSLKFIDFSDNA-LSSTLPPGIGLLTELTKLNLAKNR 560
Query: 143 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE-SLNLDSCG--IGDEGLVNL 199
LS + + S SL++LNLG N+ + E L + +L SLNL SC +G E
Sbjct: 561 LSGEIPREISTCRSLQLLNLGENDFSGEIPDELGQIPSLAISLNL-SCNRFVG-EIPSRF 618
Query: 200 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSL 244
+ L NL L++S Q+ + L L+ L NL S+N+S+ S G L
Sbjct: 619 SDLKNLGVLDVSHNQL-TGNLNVLTDLQNLVSLNISYNDFS-GDL 661
>UNIPROTKB|E1C2A1 [details] [associations]
symbol:E1C2A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016363 "nuclear matrix" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016363
GeneTree:ENSGT00560000077130 InterPro:IPR003603 SMART:SM00446
OMA:YDRDEKE InterPro:IPR025875 Pfam:PF12799 EMBL:AADN02038889
EMBL:AADN02038890 EMBL:AADN02038891 EMBL:AADN02038892
IPI:IPI00589812 Ensembl:ENSGALT00000013068 Uniprot:E1C2A1
Length = 248
Score = 113 (44.8 bits), Expect = 0.00043, P = 0.00043
Identities = 39/99 (39%), Positives = 54/99 (54%)
Query: 167 ITDECLVH---LKGLTN-LESLN-LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 221
+ D C + ++GLT+ E L L + +G + NL L LK LELSD +V S GL
Sbjct: 23 VLDNCRSYEGKIEGLTDEFEELEFLSTINVGLASVANLPKLNKLKKLELSDNRV-SGGLE 81
Query: 222 HLSG-LTNLESINLSFTGISD-GSLRKLAGLSSLKSLNL 258
L+ NL +NLS I D G++ L L +LKSL+L
Sbjct: 82 VLAEKCPNLTHLNLSGNKIKDLGTIEPLKKLENLKSLDL 120
>TAIR|locus:2005498 [details] [associations]
symbol:BRI1 "BRASSINOSTEROID INSENSITIVE 1" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0016301 "kinase activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0010224 "response to UV-B"
evidence=IGI] [GO:0005768 "endosome" evidence=IDA] [GO:0046982
"protein heterodimerization activity" evidence=IPI] [GO:0042803
"protein homodimerization activity" evidence=IDA] [GO:0010268
"brassinosteroid homeostasis" evidence=IEP] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IDA] [GO:0043234
"protein complex" evidence=IPI] [GO:0004672 "protein kinase
activity" evidence=IDA] [GO:0060548 "negative regulation of cell
death" evidence=IMP] [GO:1900140 "regulation of seedling
development" evidence=IMP] [GO:0009911 "positive regulation of
flower development" evidence=IGI] [GO:0009742 "brassinosteroid
mediated signaling pathway" evidence=IEP;IMP] [GO:0010584 "pollen
exine formation" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] [GO:0005496 "steroid binding" evidence=IDA]
[GO:0000271 "polysaccharide biosynthetic process" evidence=RCA]
[GO:0002237 "response to molecule of bacterial origin"
evidence=RCA] [GO:0007165 "signal transduction" evidence=RCA]
[GO:0009825 "multidimensional cell growth" evidence=RCA]
[GO:0009932 "cell tip growth" evidence=RCA] [GO:0010103 "stomatal
complex morphogenesis" evidence=RCA] [GO:0010817 "regulation of
hormone levels" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
[GO:0009729 "detection of brassinosteroid stimulus" evidence=IMP]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
UniProt:O22476 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0009742 GO:GO:0043234 GO:GO:0042803 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005496 GO:GO:0010584
eggNOG:COG0515 GO:GO:0005768 GO:GO:0004714 SUPFAM:SSF56112
GO:GO:0004674 GO:GO:0010008 Gene3D:2.60.120.200 InterPro:IPR013320
GO:GO:0060548 GO:GO:0009911 GO:GO:0048366 EMBL:AL161595
GO:GO:0001578 GO:GO:0010224 HOGENOM:HOG000116551 InterPro:IPR013210
Pfam:PF08263 EMBL:AF017056 EMBL:FJ708766 EMBL:AL078620
IPI:IPI00528172 PIR:T09356 RefSeq:NP_195650.1 UniGene:At.27898
UniGene:At.69020 PDB:3RGX PDB:3RGZ PDB:3RIZ PDB:3RJ0 PDBsum:3RGX
PDBsum:3RGZ PDBsum:3RIZ PDBsum:3RJ0 ProteinModelPortal:O22476
SMR:O22476 DIP:DIP-45997N IntAct:O22476 STRING:O22476 PaxDb:O22476
PRIDE:O22476 EnsemblPlants:AT4G39400.1 GeneID:830095
KEGG:ath:AT4G39400 GeneFarm:612 TAIR:At4g39400 InParanoid:O22476
KO:K13415 OMA:MSAMDTH PhylomeDB:O22476 ProtClustDB:CLSN2682665
EvolutionaryTrace:O22476 Genevestigator:O22476 GermOnline:AT4G39400
GO:GO:0004903 GO:GO:0010268 GO:GO:0009729 GO:GO:1900140
GO:GO:0009647 GO:GO:0048657
Length = 1196
Score = 111 (44.1 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 53/193 (27%), Positives = 87/193 (45%)
Query: 79 LSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGC---PVTAACLDSLSALGSLFY 135
L LT L+SL +S S + S + PVT L SL + L +
Sbjct: 95 LLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTT--LTSLGSCSGLKF 152
Query: 136 LNLNRCQLSDDGCEKFS---KIGSLKVLNLGFNEITDECLVHL---KGLTNLESLNLDSC 189
LN++ L G K S K+ SL+VL+L N I+ +V G L+ L +
Sbjct: 153 LNVSSNTLDFPG--KVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGN 210
Query: 190 GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAG 249
I G V+++ NL+ L++S S+G+ L + L+ +++S +S R ++
Sbjct: 211 KIS--GDVDVSRCVNLEFLDVSSNNF-STGIPFLGDCSALQHLDISGNKLSGDFSRAIST 267
Query: 250 LSSLKSLNLDARQ 262
+ LK LN+ + Q
Sbjct: 268 CTELKLLNISSNQ 280
Score = 58 (25.5 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 338 DKTLELISGLTGLVSLN---VSNSRITSAGLRHLKPLKNLRSLTLESCKVTAN 387
D T E+ SGL+ +LN +SN+R+T + + L+NL L L + + N
Sbjct: 499 DLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 551
>UNIPROTKB|A5H649 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9913 "Bos
taurus" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045359 "positive regulation of interferon-beta
biosynthetic process" evidence=IEA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IEA]
[GO:0045080 "positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0034346 "positive regulation of type III
interferon production" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032722 "positive regulation of chemokine
production" evidence=IEA] [GO:0007252 "I-kappaB phosphorylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0002756 "MyD88-independent toll-like
receptor signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0005737
GO:GO:0006952 GO:GO:0043123 GO:GO:0046330 GO:GO:0045944
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0032722 GO:GO:0032755 GO:GO:0009615 GO:GO:0051092
GO:GO:0032757 GO:GO:0071260 InterPro:IPR000372 SMART:SM00013
GO:GO:0032760 GO:GO:0043330 GO:GO:0032735 GO:GO:0042346
GO:GO:0045078 GO:GO:0032728 GO:GO:0007252 GO:GO:0045080
SUPFAM:SSF52200 GO:GO:0045359 GeneTree:ENSGT00680000099674
GO:GO:0034123 IPI:IPI00713414 UniGene:Bt.12298 HOVERGEN:HBG023181
PANTHER:PTHR24365:SF5 GO:GO:0045356 GO:GO:0034346 EMBL:DAAA02060200
EMBL:EF076741 EMBL:EF076742 EMBL:EF076745 EMBL:EF076746
EMBL:EF076749 STRING:A5H649 Ensembl:ENSBTAT00000011445
InParanoid:A5H649 OMA:WINKTHT Uniprot:A5H649
Length = 904
Score = 121 (47.7 bits), Expect = 0.00046, P = 0.00046
Identities = 73/309 (23%), Positives = 121/309 (39%)
Query: 20 NAITAQGMKAFAGLINLVKLDLERC-TRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 78
N I ++F GL NL +LDL R TR ++L L K++ + +W C+ +M
Sbjct: 309 NNIEHLSSRSFYGLSNLRRLDLRRSFTRQS---ISLTSLPKIDDFSFQWLKCLEYLNMDD 365
Query: 79 LSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLNL 138
N ++ + T +G+ L SL+ L LNL
Sbjct: 366 ----NNFPGIK----RNTFTGLVRLKFLSLSNSFSSLRTLTNETFL-SLAGC-PLLLLNL 415
Query: 139 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL-VHLKGLTNLESLNLDS---CGIGDE 194
+ ++S FS +G L+VL+LG NEI E +GL N+ + L +
Sbjct: 416 TKNKISKIQSGAFSWLGHLEVLDLGLNEIGQELTGQEWRGLDNIVEIYLSYNKYLELTTN 475
Query: 195 GLVNLTGLCNL--KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSS 252
++ L L + + L + S R L L L+ N + I+D L+ GL
Sbjct: 476 SFTSVPSLQRLMLRRVALKNVDCSPSPFRPLPNLVILDLSNNNIANINDELLK---GLEK 532
Query: 253 LKSLNLDARQIXXXXXXXXXXXXXXXXXDLFGARITDSGA-AY----LRNFKNLRSLEIC 307
L+ L+L + LF I + G+ + + FK+LR L+
Sbjct: 533 LEILDLQHNNLARLWKHANPGGPVQFLKGLFHLHILNLGSNGFDEIPVEAFKDLRELKSI 592
Query: 308 GGGLTDAGV 316
G+ + +
Sbjct: 593 DLGMNNLNI 601
>UNIPROTKB|F1MJZ4 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 EMBL:DAAA02057304
IPI:IPI00807324 Ensembl:ENSBTAT00000047326 OMA:FCGLGEL
Uniprot:F1MJZ4
Length = 610
Score = 119 (46.9 bits), Expect = 0.00046, P = 0.00046
Identities = 73/242 (30%), Positives = 100/242 (41%)
Query: 30 FAGLINLVKLDLERCT-RIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL 88
F GL L +LDL R T R V +K L KL+ L + N + G+ L+ L
Sbjct: 218 FCGLGELRELDLSRNTLRSVKANVFVK-LPKLQKLYLDH-NLVAAVAPGAFLGMKALRWL 275
Query: 89 QISCSKV----TDS--GIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLNLNRC- 141
+S ++V DS G+ P T L L L L NR
Sbjct: 276 DLSHNRVGSLLEDSFPGLLGLHVLRLSHNVLAGLRPRTFKDLHFLEEL----QLGHNRLR 331
Query: 142 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 201
QL + E F+ +G L+VL L N++ + GL NL LNL S + D G
Sbjct: 332 QLPE---EAFAGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQG 388
Query: 202 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 261
L L L L + G +GL+ L + L I+D R L GL+ L L+L A
Sbjct: 389 LAKLHSLHLEGGCLARLGPLAFAGLSGLRRLFLKGNSIADVDERSLGGLAELLELDLTAN 448
Query: 262 QI 263
Q+
Sbjct: 449 QL 450
>WB|WBGene00017138 [details] [associations]
symbol:EEED8.10 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR001810 InterPro:IPR012677 PROSITE:PS50102
PROSITE:PS50181 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 EMBL:FO081042 PIR:T15920 RefSeq:NP_001040757.1
ProteinModelPortal:Q09299 SMR:Q09299 PaxDb:Q09299
EnsemblMetazoa:EEED8.10a.1 EnsemblMetazoa:EEED8.10a.2 GeneID:173919
KEGG:cel:CELE_EEED8.10 UCSC:EEED8.10a CTD:173919 WormBase:EEED8.10a
eggNOG:NOG247434 HOGENOM:HOG000017058 InParanoid:Q09299 OMA:CILPREE
NextBio:881665 Uniprot:Q09299
Length = 738
Score = 120 (47.3 bits), Expect = 0.00046, P = 0.00046
Identities = 40/148 (27%), Positives = 76/148 (51%)
Query: 125 DSLSALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLNL---GFNEITDECLVHLKGLT 179
D ++ G L L +N C +++D+ ++ + L +L L GF +T L+H+ +
Sbjct: 437 DLCTSCGGLKELRINECYKITDENLSMIARRMEDLSILTLCGDGFKSLTSAGLIHISHMR 496
Query: 180 NLESLNLD-SCGIGDEGLVNLT-GLCNLKCLELSD-------TQVGSSGLRHLSGLTNLE 230
N+ L LD + + DE L++++ GL L L L++ T G S +++L LT L+
Sbjct: 497 NITELALDYNALVNDELLISISAGLPLLSSLSLANAGNDSSITAEGVSAIKNLKELTQLD 556
Query: 231 SINLSFTGISDGSLRKLAGLSSLKSLNL 258
+ +L+ ++ L +L L L+ + L
Sbjct: 557 ASSLA--AVNSKVLEQLGSLKKLEIIQL 582
>MGI|MGI:1195456 [details] [associations]
symbol:Rnh1 "ribonuclease/angiogenin inhibitor 1"
species:10090 "Mus musculus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008428 "ribonuclease inhibitor activity" evidence=ISO]
[GO:0032311 "angiogenin-PRI complex" evidence=ISO] [GO:0043086
"negative regulation of catalytic activity" evidence=ISO]
[GO:0045765 "regulation of angiogenesis" evidence=ISO]
MGI:MGI:1195456 GO:GO:0005737 GO:GO:0045765 GO:GO:0008428
GO:GO:0032311 eggNOG:NOG309390 InterPro:IPR003590 SMART:SM00368
CTD:6050 HOGENOM:HOG000140402 HOVERGEN:HBG001059 KO:K16634
OMA:MEDRLQA OrthoDB:EOG4DZ1VG ChiTaRS:RNH1 EMBL:AF071546
EMBL:AK133822 EMBL:AK141351 EMBL:AK147059 EMBL:BC010331
IPI:IPI00313296 RefSeq:NP_001165571.1 RefSeq:NP_001165572.1
RefSeq:NP_660117.2 UniGene:Mm.279485 PDB:3TSR PDBsum:3TSR
ProteinModelPortal:Q91VI7 SMR:Q91VI7 IntAct:Q91VI7 STRING:Q91VI7
PhosphoSite:Q91VI7 UCD-2DPAGE:Q91VI7 PaxDb:Q91VI7 PRIDE:Q91VI7
Ensembl:ENSMUST00000106033 Ensembl:ENSMUST00000167493 GeneID:107702
KEGG:mmu:107702 UCSC:uc009kjs.2 GeneTree:ENSGT00670000097902
InParanoid:Q91VI7 NextBio:359282 Bgee:Q91VI7 CleanEx:MM_RNH1
Genevestigator:Q91VI7 GermOnline:ENSMUSG00000038650 Uniprot:Q91VI7
Length = 456
Score = 102 (41.0 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 40/138 (28%), Positives = 70/138 (50%)
Query: 136 LNLNRCQLSDDGCEKFSKI----GSLKVLNLGFNEITDECL-VHLKGLTN----LESLNL 186
+ L+ C L++ C+ S +L L+L NE+ D + + L+GL N ++ L+L
Sbjct: 28 VRLDDCGLTEVRCKDISSAVQANPALTELSLRTNELGDGGVGLVLQGLQNPTCKIQKLSL 87
Query: 187 DSCGIGDEGLVNLTG----LCNLKCLELSDTQVGSSGLRHL-SGLTN----LESINLSFT 237
+CG+ + G L G L L+ L L+D +G +GL+ L GL + LE + L +
Sbjct: 88 QNCGLTEAGCGILPGMLRSLSTLRELHLNDNPMGDAGLKLLCEGLQDPQCRLEKLQLEYC 147
Query: 238 GISDGSLRKLAGLSSLKS 255
++ S LA + +K+
Sbjct: 148 NLTATSCEPLASVLRVKA 165
Score = 57 (25.1 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 342 ELISGLTGLVSLNVSNSRITSAGLRHLKP---LKN--LRSLTLESCKVTANDIKRL 392
++++ L L++S++++ +AG+ L P L + LR+L L C +TA K L
Sbjct: 216 DVVASKASLQELDLSSNKLGNAGIAALCPGLLLPSCKLRTLWLWECDITAEGCKDL 271
>FB|FBgn0259677 [details] [associations]
symbol:CG42346 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR003961 PROSITE:PS51450 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014298 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082
RefSeq:NP_001036306.2 UniGene:Dm.23593 ProteinModelPortal:Q0KHN6
SMR:Q0KHN6 GeneID:3355160 KEGG:dme:Dmel_CG42346 FlyBase:FBgn0259677
InParanoid:Q0KHN6 OMA:RHFSIPN OrthoDB:EOG40ZPCD PhylomeDB:Q0KHN6
GenomeRNAi:3355160 NextBio:850922 Bgee:Q0KHN6 Uniprot:Q0KHN6
Length = 1639
Score = 123 (48.4 bits), Expect = 0.00055, P = 0.00055
Identities = 89/384 (23%), Positives = 149/384 (38%)
Query: 30 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 89
F+ L L+L C+ K L L LN++ N + +D++ L + NL+ L
Sbjct: 685 FSNEFPLNSLNLGNCSLRKLEQHAFKSLTNLNELNLER-NQLNPADIQTLD-IPNLRRLL 742
Query: 90 ISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLNLN--RCQLSDDG 147
+S + + +G + ++ L + L LF N N R L D+
Sbjct: 743 LSHNNFSYAGSVGIMAGMLDRLRSLQQLSMSNCSLGQIPDL--LFAKNTNLVRLDLCDNR 800
Query: 148 CEK-----FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL 202
+ FS + K L L NE++D + L L+ LESL+L + L+G
Sbjct: 801 LTQINRNIFSGLNVFKELRLCRNELSDFPHIALYNLSTLESLDLARNQLASIDFFKLSGT 860
Query: 203 CNLKCLELSDTQVGS-SGLRHLSGLTNLESINLS---FTGISDGSLRKLAGLSSLKSLNL 258
NL+ L L D ++ + SG ++ LT L+S++LS + LR L + N
Sbjct: 861 LNLRQLILRDNKITALSGFNAVN-LTQLDSVDLSGNLLLSLPANFLRHSINLQKVHLSNN 919
Query: 259 DARQIXXXXXXXXXXXXXXXXXDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKH 318
QI +L G I + L+ L IC L+ K
Sbjct: 920 RFLQIPSSALSDVSIPRLSWL-NLTGNPINRIYTVKEERYPYLKELYICQTNLSILTSKD 978
Query: 319 IKDXXXXXXXXXXXXXXXTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSL- 377
+ T + LT L++L++S + + L+ L+ LR L
Sbjct: 979 F-EAFQALQHLHLVNNRITRISPGAFKSLTNLLTLDLSVNELEMLPKERLQGLRLLRFLN 1037
Query: 378 ----TLESCKVTANDIKRLQSRDL 397
TL+ + + D+ +Q+ DL
Sbjct: 1038 ISHNTLKDLEEFSVDLLEMQTLDL 1061
>UNIPROTKB|Q86WI3 [details] [associations]
symbol:NLRC5 "Protein NLRC5" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060335 "positive regulation of
interferon-gamma-mediated signaling pathway" evidence=IMP;IDA]
[GO:0060340 "positive regulation of type I interferon-mediated
signaling pathway" evidence=IDA] [GO:0045087 "innate immune
response" evidence=IMP;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0060339 "negative regulation of type I
interferon-mediated signaling pathway" evidence=IDA] [GO:0051607
"defense response to virus" evidence=IEP] [GO:0043549 "regulation
of kinase activity" evidence=IDA] [GO:0032088 "negative regulation
of NF-kappaB transcription factor activity" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0032480 "negative
regulation of type I interferon production" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045345 "positive regulation of MHC class I
biosynthetic process" evidence=IDA] [GO:0000979 "RNA polymerase II
core promoter sequence-specific DNA binding" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 Reactome:REACT_6900 GO:GO:0045944 GO:GO:0045087
GO:GO:0051607 GO:GO:0032088 InterPro:IPR025875 Pfam:PF12799
GO:GO:0000979 GO:GO:0032480 GO:GO:0043549 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0045345 GO:GO:0060339 GO:GO:0060340
GO:GO:0060335 HSSP:P10775 eggNOG:NOG265451 EMBL:AF389420
EMBL:EF452236 EMBL:AK074133 EMBL:AK074182 EMBL:AC009090
EMBL:AC023825 EMBL:AK090439 EMBL:BC050527 EMBL:BC063566
EMBL:AK027414 EMBL:AK027416 IPI:IPI00329085 IPI:IPI00383061
IPI:IPI00641739 IPI:IPI00647281 IPI:IPI00789837 IPI:IPI00854610
RefSeq:NP_115582.4 UniGene:Hs.528836 ProteinModelPortal:Q86WI3
SMR:Q86WI3 IntAct:Q86WI3 STRING:Q86WI3 DMDM:269849666 PaxDb:Q86WI3
PRIDE:Q86WI3 DNASU:84166 Ensembl:ENST00000262510
Ensembl:ENST00000308149 Ensembl:ENST00000436936
Ensembl:ENST00000539144 Ensembl:ENST00000539881 GeneID:84166
KEGG:hsa:84166 UCSC:uc021tit.1 UCSC:uc021tiu.1 CTD:84166
GeneCards:GC16P057023 HGNC:HGNC:29933 MIM:613537 neXtProt:NX_Q86WI3
PharmGKB:PA162397694 HOVERGEN:HBG108194 InParanoid:Q86WI3
OMA:EILLSWN OrthoDB:EOG4Z0B4Q PhylomeDB:Q86WI3 ChiTaRS:NLRC5
GenomeRNAi:84166 NextBio:73516 ArrayExpress:Q86WI3 Bgee:Q86WI3
CleanEx:HS_NLRC5 Genevestigator:Q86WI3 Uniprot:Q86WI3
Length = 1866
Score = 113 (44.8 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 48/151 (31%), Positives = 71/151 (47%)
Query: 117 CPVTAACLDSLSALGSLFYL---NLNRCQLSDDGCEKFSKI--GS--LKVLNLG---FNE 166
C T S LG +L +L+ Q ++G + + G LK L+L N
Sbjct: 1505 CVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLLNS 1564
Query: 167 ITDECLVH-LKGLTNLESLNLDSCGIGDEGLVNLT----GLCNLKCLELSDTQVGSSGLR 221
T L H L +T L+SL L+ IGD G +L+ +L+ L+LS Q+G +G++
Sbjct: 1565 STLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQ 1624
Query: 222 HLS----GLTNLESINLSFTGISDGSLRKLA 248
HL+ GL L I+LS IS +LA
Sbjct: 1625 HLATILPGLPELRKIDLSGNSISSAGGVQLA 1655
Score = 54 (24.1 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 342 ELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQS 394
+ + G L ++++ + + LR L LR + L SCK+ K L S
Sbjct: 1710 QALDGSPHLEEISLAENNLAGGVLRFCMELPLLRQIDLVSCKIDNQTAKLLTS 1762
Score = 47 (21.6 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 17/69 (24%), Positives = 33/69 (47%)
Query: 37 VKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNC---ITDSDMKPLSGLTNLKSLQISCS 93
+ LD + C L G ++E+L+ K C ++ + L + L+ L ++ S
Sbjct: 665 IHLDFDGCPLEPHCPEALVGCGQIENLSFKSRKCGDAFAEALSRSLPTMGRLQMLGLAGS 724
Query: 94 KVTDSGIAY 102
K+T GI++
Sbjct: 725 KITARGISH 733
>UNIPROTKB|Q28XE2 [details] [associations]
symbol:Anp32a "Acidic leucine-rich nuclear phosphoprotein
32 family member A" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005783 "endoplasmic reticulum"
evidence=ISS] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783
GO:GO:0005634 GO:GO:0048471 GO:GO:0006913 EMBL:CM000071
GenomeReviews:CM000071_GR eggNOG:NOG322008 InterPro:IPR003603
SMART:SM00446 InterPro:IPR025875 Pfam:PF12799 OrthoDB:EOG43J9N5
RefSeq:XP_001361795.2 GeneID:4805386 KEGG:dpo:Dpse_GA19125
FlyBase:FBgn0079123 InParanoid:Q28XE2 Uniprot:Q28XE2
Length = 263
Score = 112 (44.5 bits), Expect = 0.00066, P = 0.00066
Identities = 41/103 (39%), Positives = 56/103 (54%)
Query: 169 DECL-VHLKGLTNLESLNLDSCGIGDEGLVNLTG---LCNLKCLELSDTQVGSSGLRHLS 224
D C + GLT+ E L+S + + GL L G L NLK LELSD ++ SSGL +L+
Sbjct: 23 DNCRSTSIVGLTD-EYTALESLSLINVGLTTLKGFPKLPNLKKLELSDNRI-SSGLNYLT 80
Query: 225 GLTNLESINLSFTGISD-GSLRKLAGLSSLKSLNL---DARQI 263
L+ +NLS I D +L+ L SL L+L DA Q+
Sbjct: 81 TSPKLQYLNLSGNKIKDLETLKPLEEFKSLAVLDLFNNDATQV 123
>WB|WBGene00011637 [details] [associations]
symbol:T09A5.9 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0009792 GO:GO:0006898 eggNOG:COG4886 GO:GO:0040011
GO:GO:0040035 EMBL:Z36753 InterPro:IPR003603 SMART:SM00446
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00670000097777
HOGENOM:HOG000211189 PIR:T24722 RefSeq:NP_495653.1
ProteinModelPortal:P45969 SMR:P45969 STRING:P45969 PaxDb:P45969
EnsemblMetazoa:T09A5.9.1 EnsemblMetazoa:T09A5.9.2 GeneID:174266
KEGG:cel:CELE_T09A5.9 UCSC:T09A5.9.2 CTD:174266 WormBase:T09A5.9
InParanoid:P45969 OMA:LPNEIEQ NextBio:883295 Uniprot:P45969
Length = 326
Score = 105 (42.0 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 41/133 (30%), Positives = 69/133 (51%)
Query: 126 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 185
++S+L +L L+L QL++ + +L L+L +N I + L LT LE+L
Sbjct: 76 TISSLVTLTSLDLYENQLTE--ISHLESLVNLVSLDLSYNRIRQ--INGLDKLTKLETLY 131
Query: 186 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 245
L S I E + NL L LK LEL D ++ + ++ L NL+ + F G +R
Sbjct: 132 LVSNKI--EKIENLEALTQLKLLELGDNRIKK--IENIGHLVNLDEL---FIG--KNKIR 182
Query: 246 KLAGLSSLKSLNL 258
+L G+ +L+ L++
Sbjct: 183 QLEGVETLQKLSV 195
Score = 48 (22.0 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 337 TDKTLELISG---LTGLVSLNVSNSRI-TSAGLRHLKPLKN 373
+D+ L+ I G LT L+ L+V+N+ I T +G+ L+ L +
Sbjct: 221 SDQGLQDIHGVEPLTNLLLLDVANNEIKTFSGVERLESLND 261
>TAIR|locus:2046515 [details] [associations]
symbol:RLP24 "receptor like protein 24" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016301 "kinase activity" evidence=ISS] [GO:0007165 "signal
transduction" evidence=IC] Pfam:PF00560 InterPro:IPR001611
EMBL:CP002685 GenomeReviews:CT485783_GR eggNOG:COG4886
EMBL:AC003033 InterPro:IPR025875 Pfam:PF12799 EMBL:AC002334
HOGENOM:HOG000116562 ProtClustDB:CLSN2683406 IPI:IPI00532583
PIR:D84740 PIR:T01105 RefSeq:NP_180861.1 UniGene:At.66296
ProteinModelPortal:O49329 SMR:O49329 EnsemblPlants:AT2G33020.1
GeneID:817864 KEGG:ath:AT2G33020 TAIR:At2g33020 InParanoid:O49329
OMA:IHIDITS PhylomeDB:O49329 ArrayExpress:O49329
Genevestigator:O49329 Uniprot:O49329
Length = 864
Score = 107 (42.7 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 40/122 (32%), Positives = 59/122 (48%)
Query: 125 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 184
+SL L SL YLNL +S KF + L+VL+L FN + +C + LT + L
Sbjct: 177 NSLFELHSLRYLNLAFNNISSSLPSKFGNLNKLEVLSLSFNGFSGQCFPTISNLTRITQL 236
Query: 185 NLDSCGI-GDEGLV-NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 242
L + + G LV NLT L L LSD + +L +L +++L +S G
Sbjct: 237 YLHNNELTGSFPLVQNLT---KLSFLGLSDNLFSGTIPSYLFTFPSLSTLDLRENDLS-G 292
Query: 243 SL 244
S+
Sbjct: 293 SI 294
Score = 57 (25.1 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 337 TDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 383
T K + + L L+V N+R+ LK L NLR LTL S K
Sbjct: 552 TGKLPRSLLNCSSLRFLSVDNNRVKDTFPFWLKALPNLRVLTLRSNK 598
>UNIPROTKB|O75473 [details] [associations]
symbol:LGR5 "Leucine-rich repeat-containing G-protein
coupled receptor 5" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0048839
"inner ear development" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=TAS] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0005887
GO:GO:0004930 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0048839
GO:GO:0016500 InterPro:IPR026906 Pfam:PF13306 HOVERGEN:HBG031675
HOGENOM:HOG000231829 EMBL:AF062006 EMBL:AF061444 EMBL:AC078860
EMBL:AC090116 EMBL:BC096324 EMBL:BC096325 EMBL:BC096326
EMBL:BC099650 IPI:IPI00021131 IPI:IPI00940760 PIR:JE0176
RefSeq:NP_003658.1 UniGene:Hs.658889 ProteinModelPortal:O75473
SMR:O75473 STRING:O75473 PhosphoSite:O75473 PRIDE:O75473
Ensembl:ENST00000266674 Ensembl:ENST00000540815 GeneID:8549
KEGG:hsa:8549 UCSC:uc001swl.3 UCSC:uc001swm.3 CTD:8549
GeneCards:GC12P071833 HGNC:HGNC:4504 HPA:HPA012530 MIM:606667
neXtProt:NX_O75473 PharmGKB:PA28894 InParanoid:O75473 KO:K04308
OMA:FNPHFKE OrthoDB:EOG46143B PhylomeDB:O75473 GenomeRNAi:8549
NextBio:32032 ArrayExpress:O75473 Bgee:O75473 CleanEx:HS_LGR5
Genevestigator:O75473 GermOnline:ENSG00000139292 Uniprot:O75473
Length = 907
Score = 124 (48.7 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 63/247 (25%), Positives = 106/247 (42%)
Query: 20 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 79
NA+T AF GL +L L L+ H L+ L L+SL + N I+
Sbjct: 100 NALTYIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQNLRSLQSLRLD-ANHISYVPPSCF 158
Query: 80 SGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLNLN 139
SGL +L+ L + + +T+ + + + L SL L+L+
Sbjct: 159 SGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLH 218
Query: 140 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG---DEGL 196
++ G + F + SL+ L+L +N + DE ++ L+NL+ L S I ++
Sbjct: 219 NNRIHSLGKKCFDGLHSLETLDLNYNNL-DEFPTAIRTLSNLKELGFHSNNIRSIPEKAF 277
Query: 197 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 256
V L + + VG S +HL L L ++N + I++ L G ++L+SL
Sbjct: 278 VGNPSLITIHFYDNPIQFVGRSAFQHLPELRTL-TLN-GASQITE--FPDLTGTANLESL 333
Query: 257 NLDARQI 263
L QI
Sbjct: 334 TLTGAQI 340
Score = 39 (18.8 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 344 ISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 379
++G L SL ++ ++I+S L NL+ L L
Sbjct: 324 LTGTANLESLTLTGAQISSLPQTVCNQLPNLQVLDL 359
>UNIPROTKB|C4PCK0 [details] [associations]
symbol:TLR5 "TLR5" species:9031 "Gallus gallus" [GO:0002755
"MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0034146 "toll-like receptor 5 signaling
pathway" evidence=IEA] [GO:0042742 "defense response to bacterium"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0050707 "regulation of cytokine secretion" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005149
"interleukin-1 receptor binding" evidence=IEA] [GO:0032757
"positive regulation of interleukin-8 production" evidence=IEA]
[GO:0034123 "positive regulation of toll-like receptor signaling
pathway" evidence=IEA] [GO:0071260 "cellular response to mechanical
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027176 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045087
GO:GO:0005622 GO:GO:0032757 GO:GO:0071260 GO:GO:0004888
GeneTree:ENSGT00700000104185 SUPFAM:SSF52200 GO:GO:0034123
OMA:VSGNGWT PANTHER:PTHR24365:SF7 EMBL:AADN02012154 EMBL:FJ915535
EMBL:FJ915536 EMBL:FJ915537 EMBL:FJ915539 EMBL:FJ915543
EMBL:FJ915549 EMBL:FJ915551 EMBL:FJ915552 IPI:IPI00579878
STRING:C4PCK0 Ensembl:ENSGALT00000015302 Uniprot:C4PCK0
Length = 861
Score = 104 (41.7 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 34/113 (30%), Positives = 53/113 (46%)
Query: 151 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLEL 210
F + +L+ LNL N+I GL NLE LNL S +G+ GL ++ ++L
Sbjct: 310 FESLRNLEFLNLFRNKINQIQKQAFFGLENLEILNLSSNLLGELYDYTFEGLHSIMYIDL 369
Query: 211 SDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 263
+G G + S L NL+ I+L D +++KL L S L ++
Sbjct: 370 QQNHIGMIGEKSFSNLVNLKIIDLR-----DNAIKKLPSFPHLTSAFLSDNKL 417
Score = 53 (23.7 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 26 GMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP--LSGLT 83
G +AF L NL LDL + L + GL +L L + + N + DS ++ L
Sbjct: 89 GKEAFRNLPNLRVLDLGFNNILLLDLDSFAGLQRLTILRL-FQNNLGDSILEERYFQDLR 147
Query: 84 NLKSLQISCSKVT 96
+L+ L +S +++T
Sbjct: 148 SLEELDLSGNQIT 160
Score = 46 (21.3 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 342 ELISGLTGLVSLNVSNSRITSAGLR 366
E+ +GLT L LN++++ ++ LR
Sbjct: 522 EIFNGLTSLKRLNLASNLLSHLSLR 546
>UNIPROTKB|Q50L44 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0043491 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 OrthoDB:EOG40S0F8
EMBL:AB195262 IPI:IPI00607536 RefSeq:NP_001019748.1
UniGene:Gga.13113 HSSP:Q05793 ProteinModelPortal:Q50L44 SMR:Q50L44
STRING:Q50L44 Ensembl:ENSGALT00000004272 GeneID:415344
KEGG:gga:415344 CTD:84894 HOVERGEN:HBG057546 InParanoid:Q50L44
OMA:RIRDRKP NextBio:20818967 ArrayExpress:Q50L44 Uniprot:Q50L44
Length = 613
Score = 119 (46.9 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 66/246 (26%), Positives = 100/246 (40%)
Query: 20 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNL---KGLMKLESLNIKWCNCITDSDM 76
N I+A AF L NL L L R R+ L+ L GL L L+I + D
Sbjct: 98 NIISAIEPGAFNNLFNLRTLGL-RSNRLK--LIPLGVFTGLSNLTKLDISENKIVILLDY 154
Query: 77 KPLSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYL 136
L NLKSL++ + + E C +T+ ++LS L L L
Sbjct: 155 M-FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVL 213
Query: 137 NLNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNLESLNLDSCGIG 192
L ++ F ++ LKVL + + +T CL GL NL SL++ C +
Sbjct: 214 RLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTSNCLY---GL-NLTSLSITHCNLT 269
Query: 193 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSS 252
V++ L L+ L LS + + L L L+ I L ++ GL+
Sbjct: 270 SIPYVSVRHLVYLRFLNLSYNPIVTIEGSMLHDLLRLQEIQLVGGQLTTVEPFAFRGLNY 329
Query: 253 LKSLNL 258
L+ LN+
Sbjct: 330 LRILNV 335
Score = 40 (19.1 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 346 GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 381
GL L LNVS + +T+ + NL +L L++
Sbjct: 326 GLNYLRILNVSGNLLTTLEESAFHSVGNLETLILDN 361
>RGD|68429 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein, acid
labile subunit" species:10116 "Rattus norvegicus" [GO:0005520
"insulin-like growth factor binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0042567 "insulin-like growth
factor ternary complex" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 RGD:68429
GO:GO:0043231 GO:GO:0005634 GO:GO:0007165 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 CTD:3483 HOGENOM:HOG000033909 HOVERGEN:HBG000327
OrthoDB:EOG4FFD1R GO:GO:0005520 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0042567 EMBL:S46785 IPI:IPI00202416 PIR:JC1282
RefSeq:NP_445781.2 UniGene:Rn.7327 ProteinModelPortal:P35859
STRING:P35859 PRIDE:P35859 GeneID:79438 KEGG:rno:79438
UCSC:RGD:68429 InParanoid:P35859 NextBio:614812 ArrayExpress:P35859
Genevestigator:P35859 GermOnline:ENSRNOG00000015061 Uniprot:P35859
Length = 603
Score = 117 (46.2 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 65/247 (26%), Positives = 99/247 (40%)
Query: 20 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNL-KGLMKLESLNIKWCNCITDSDMKP 78
N +T F GL L +LDL R + N+ L +L+ L + N IT
Sbjct: 204 NKLTYLQPALFCGLGELRELDLSR-NALRSVKANVFVHLPRLQKLYLDR-NLITAVAPGA 261
Query: 79 LSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLD--SLSALGSLFYL 136
G+ L+ L +S ++V +G+ A L + L L L
Sbjct: 262 FLGMKALRWLDLSHNRV--AGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEEL 319
Query: 137 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 196
L ++ G F +G L+VL L N+IT+ + GL N+ +NL +
Sbjct: 320 QLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPE 379
Query: 197 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 256
GL L L L + +G L +GL+ L + L IS + LAGLS L L
Sbjct: 380 RVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLEL 439
Query: 257 NLDARQI 263
+L ++
Sbjct: 440 DLTTNRL 446
Score = 116 (45.9 bits), Expect = 0.00096, P = 0.00096
Identities = 39/138 (28%), Positives = 65/138 (47%)
Query: 126 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 185
+ LG L L LN Q+++ FS + ++ V+NL N + +GL L SL+
Sbjct: 333 TFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLH 392
Query: 186 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 245
L+ +G L GL L+ L L D + S + L+GL+ L ++L+ ++ +
Sbjct: 393 LEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQ 452
Query: 246 KLAGLSSLKSLNLDARQI 263
GL L+ L L Q+
Sbjct: 453 LFQGLGHLEYLLLSYNQL 470
Score = 42 (19.8 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 11/42 (26%), Positives = 25/42 (59%)
Query: 344 ISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 385
++GL+ L+ L+++ +R+T + + L +L L L ++T
Sbjct: 430 LAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLT 471
>DICTYBASE|DDB_G0284039 [details] [associations]
symbol:pprA "Protein phosphatase 1 regulatory subunit
7" species:44689 "Dictyostelium discoideum" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
dictyBase:DDB_G0284039 GO:GO:0005634 GenomeReviews:CM000153_GR
eggNOG:COG4886 EMBL:AAFI02000063 InterPro:IPR003603 SMART:SM00446
HSSP:P25147 OMA:PQYRRKI EMBL:AF018639 RefSeq:XP_638758.1
ProteinModelPortal:Q54Q39 STRING:Q54Q39 EnsemblProtists:DDB0191475
GeneID:8624429 KEGG:ddi:DDB_G0284039 ProtClustDB:CLSZ2728950
Uniprot:Q54Q39
Length = 336
Score = 113 (44.8 bits), Expect = 0.00084, P = 0.00084
Identities = 34/115 (29%), Positives = 61/115 (53%)
Query: 149 EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL 208
E ++ +K L LG N + + + +L+ L N+E+L L I + + + L +L+ L
Sbjct: 154 ENLQELVPIKNLELGSNRLRE--IENLENLVNIETLWLGRNKITE--IKGINHLSHLRIL 209
Query: 209 ELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 263
L ++ G++ L GL LE + LS GI+D + L L L++L++ A +I
Sbjct: 210 SLQSNRLTEIGVKGLVGLNCLEELYLSHNGITD--IDGLQSLKQLRTLDISANKI 262
>SGD|S000001676 [details] [associations]
symbol:SDS22 "Regulatory subunit of the type 1 protein
phosphatase (PP1) Glc7p" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0071862 "protein
phosphatase type 1 activator activity" evidence=IGI] [GO:0051301
"cell division" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0051457 "maintenance of
protein location in nucleus" evidence=IMP] [GO:0000164 "protein
phosphatase type 1 complex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007059 "chromosome segregation" evidence=IMP]
[GO:0004865 "protein serine/threonine phosphatase inhibitor
activity" evidence=IGI;IMP] InterPro:IPR001611 PROSITE:PS51450
SGD:S000001676 GO:GO:0005634 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 eggNOG:COG4886 EMBL:BK006944 EMBL:X69765
InterPro:IPR025875 Pfam:PF12799 GO:GO:0051457 GO:GO:0000164
GO:GO:0004865 GeneTree:ENSGT00670000097777 GO:GO:0071862
HOGENOM:HOG000211189 OrthoDB:EOG4B01ZB EMBL:X83609 EMBL:Z28193
EMBL:AY558314 PIR:S38030 RefSeq:NP_012728.1
ProteinModelPortal:P36047 SMR:P36047 DIP:DIP-2378N IntAct:P36047
MINT:MINT-641828 STRING:P36047 PaxDb:P36047 PeptideAtlas:P36047
EnsemblFungi:YKL193C GeneID:853641 KEGG:sce:YKL193C CYGD:YKL193c
OMA:CEIDFEG NextBio:974534 Genevestigator:P36047 GermOnline:YKL193C
Uniprot:P36047
Length = 338
Score = 113 (44.8 bits), Expect = 0.00085, P = 0.00085
Identities = 46/137 (33%), Positives = 69/137 (50%)
Query: 124 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 183
L++L+ L +L+++ Q S E S + SLK L LG N++ +GL+NLE
Sbjct: 131 LENLTDLENLYFV-----QNSISKIENLSTLKSLKNLELGGNKVHSIEPDSFEGLSNLEE 185
Query: 184 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS 243
+ L I L+NL L NLK L + ++ + +L LTNLE + LS I+
Sbjct: 186 IWLGKNSI--PRLINLHPLKNLKILSIQSNKLKK--IENLEELTNLEELYLSHNFIT--- 238
Query: 244 LRKLAGLS-SLKSLNLD 259
K+ GL +LK LD
Sbjct: 239 --KIEGLEKNLKLTTLD 253
>FB|FBgn0003255 [details] [associations]
symbol:rk "rickets" species:7227 "Drosophila melanogaster"
[GO:0004930 "G-protein coupled receptor activity" evidence=ISS;NAS]
[GO:0016021 "integral to membrane" evidence=IEA;ISS] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA;ISS]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0008188
"neuropeptide receptor activity" evidence=ISS] [GO:0007564
"regulation of chitin-based cuticle tanning" evidence=IMP]
[GO:0001837 "epithelial to mesenchymal transition" evidence=IMP]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 EMBL:AE014134
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0001837
InterPro:IPR025875 Pfam:PF12799 GO:GO:0016500 GO:GO:0008188
GeneTree:ENSGT00650000092962 KO:K08399 RefSeq:NP_476702.1
UniGene:Dm.6481 ProteinModelPortal:Q7KTA0 SMR:Q7KTA0 STRING:Q7KTA0
PRIDE:Q7KTA0 EnsemblMetazoa:FBtr0080610 GeneID:34819
KEGG:dme:Dmel_CG8930 UCSC:CG8930-RA CTD:34819 FlyBase:FBgn0003255
InParanoid:Q7KTA0 OMA:WLITRKT OrthoDB:EOG4FN2ZQ PhylomeDB:Q7KTA0
GenomeRNAi:34819 NextBio:790377 ArrayExpress:Q7KTA0 Bgee:Q7KTA0
GO:GO:0007564 Uniprot:Q7KTA0
Length = 1360
Score = 115 (45.5 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 76/291 (26%), Positives = 115/291 (39%)
Query: 19 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 78
NN +T +F NL +L L + I+ GL KL+ L+++ C + +
Sbjct: 188 NNNLTKLEANSFFMAPNLEELTLSDNSIINMDPNAFYGLAKLKRLSLQNCG-LKSLPPQS 246
Query: 79 LSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLNL 138
GL L SLQ++ + + EG ++L+ L +L LNL
Sbjct: 247 FQGLAQLTSLQLNGNALVSLDGDCLGHLQKLRTLRLEGNLFYRIPTNALAGLRTLEALNL 306
Query: 139 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD--EGL 196
L+ E F ++ +L VL L N+I LK LT L+ L LD I EGL
Sbjct: 307 GSNLLTIINDEDFPRMPNLIVLLLKRNQIMKISAGALKNLTALKVLELDDNLISSLPEGL 366
Query: 197 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 256
L+ L L + + L + ++ + LS IS G+ R G+S L+ L
Sbjct: 367 SKLSQLQELSITSNRLRWINDTELPRSMQMLDMRANPLST--ISPGAFR---GMSKLRKL 421
Query: 257 NL-DARQIXXXXXXXXXXXXXXXXXDLFGARITDSGAAYLRNFKNLRSLEI 306
L D R + D G I + A R L+SLE+
Sbjct: 422 ILSDVRTLRSFPELEACHALEILKLDRAG--IQEVPANLCRQTPRLKSLEL 470
Score = 52 (23.4 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 342 ELISGLTGLVSLNVSNS---RITSAGLR---HLKPLKN 373
E SG T L LN+ N+ + +GLR HLK N
Sbjct: 551 EAFSGFTALEDLNLGNNIFPELPESGLRALLHLKTFNN 588
>RGD|1308170 [details] [associations]
symbol:Cd180 "CD180 molecule" species:10116 "Rattus norvegicus"
[GO:0002322 "B cell proliferation involved in immune response"
evidence=ISO] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=ISO]
[GO:0071222 "cellular response to lipopolysaccharide" evidence=ISO]
RGD:1308170 InterPro:IPR000483 SMART:SM00082 CTD:4064 KO:K06555
OrthoDB:EOG4W3SMG GeneTree:ENSGT00700000104185 OMA:TEAFKEC
EMBL:CH473955 IPI:IPI00360317 RefSeq:NP_001099875.1
UniGene:Rn.148663 Ensembl:ENSRNOT00000013768 GeneID:294706
KEGG:rno:294706 UCSC:RGD:1308170 NextBio:638441 Uniprot:D3ZIP2
Length = 662
Score = 106 (42.4 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 57/229 (24%), Positives = 89/229 (38%)
Query: 81 GLTNLKSLQISCSKVTD----SGIAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYL 136
GL+ LK L +S +K + S + + + + CL++L L L L
Sbjct: 320 GLSKLKKLVLSANKFENLCQISASNFPSLTHLYIKGNTKRLELGSGCLETLEHLRELD-L 378
Query: 137 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 196
+ + + SD + + L+ LNL +NE K LE L+L + +
Sbjct: 379 SHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLGLRTEAFKECPQLELLDLAFTRLHVKDA 438
Query: 197 VN-LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK---LAGLSS 252
+ L LK L LS +GSS L GL L +NL +G+++K L L S
Sbjct: 439 QSPFQNLHLLKVLNLSHCLLGSSNQHLLDGLPALRHLNLQGNRFPNGNIQKTNPLQALGS 498
Query: 253 LKSLNLDARQIXXXXXXXXXXXXXXXXXDLFGARITDSGAAYLRNFKNL 301
L+ L L + DL R+T S L + K +
Sbjct: 499 LEILILSFCDLSSIDHQAFINLKIMNHVDLSHNRLTSSSIEALSHLKGI 547
Score = 50 (22.7 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 20 NAITAQGMKAFAGLINLVKLDLERC 44
NA+ F+ L+NL LDL RC
Sbjct: 63 NALPTIQKTTFSRLVNLTFLDLTRC 87
Score = 42 (19.8 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 10/33 (30%), Positives = 22/33 (66%)
Query: 353 LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 385
+++S++R+TS+ + L LK + L L S +++
Sbjct: 526 VDLSHNRLTSSSIEALSHLKGIY-LNLASNRIS 557
>FB|FBgn0261269 [details] [associations]
symbol:conv "convoluted" species:7227 "Drosophila
melanogaster" [GO:0035151 "regulation of tube size, open tracheal
system" evidence=IMP] [GO:0007424 "open tracheal system
development" evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0035159 "regulation of tube length, open tracheal
system" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 EMBL:AE013599 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008045
GeneTree:ENSGT00690000101816 GO:GO:0035159 InterPro:IPR026906
Pfam:PF13306 EMBL:EU814872 RefSeq:NP_610948.2 UniGene:Dm.23922
SMR:A1Z9N6 STRING:A1Z9N6 EnsemblMetazoa:FBtr0087540 GeneID:36588
KEGG:dme:Dmel_CG8561 UCSC:CG8561-RA CTD:36588 FlyBase:FBgn0261269
InParanoid:A1Z9N6 OMA:TIVCENT OrthoDB:EOG4ZGMT6 GenomeRNAi:36588
NextBio:799366 Uniprot:A1Z9N6
Length = 1092
Score = 119 (46.9 bits), Expect = 0.00095, P = 0.00095
Identities = 55/207 (26%), Positives = 95/207 (45%)
Query: 125 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 184
D+++ + +L YL+L ++ F K+ L LNL N++ D +GL L +L
Sbjct: 620 DAVAVMSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQLLTL 679
Query: 185 NLDSCGIGDEGLVN--LTGLCNLKCLELSD---TQVGSSGLRHLSGLTNLESINLSFTGI 239
NL S GI + L N GL +L+ L+LS T++ + L L +LE+++LS I
Sbjct: 680 NLSSNGI--QTLQNDIFVGLPSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDLSHNRI 737
Query: 240 SDGSLRKLAGLS----SLKSLNLDARQIXXXXXXXXXXXXXXXXXDLFGARITDSGAAYL 295
S + + +L++LNL + D+ +I D +
Sbjct: 738 SFVTKKTFPSHQYIPYNLRNLNLSYNLMPILTYDITFGTKKLVRLDVSHNQINDLRRGVI 797
Query: 296 RNFKNLRSLEICGGGLTDA-GVKHIKD 321
NF +L+SL++ L++ +HI D
Sbjct: 798 SNFTSLQSLDMSYNELSNLKSEEHIFD 824
>RGD|1564145 [details] [associations]
symbol:Lrrn1 "leucine rich repeat neuronal 1" species:10116
"Rattus norvegicus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 RGD:1564145 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 CTD:57633 GeneTree:ENSGT00690000102097
HOGENOM:HOG000252914 HOVERGEN:HBG052361 OMA:GINNMGE
OrthoDB:EOG4XKV6G EMBL:BC107902 IPI:IPI00191618
RefSeq:NP_001032440.1 UniGene:Rn.96330 ProteinModelPortal:Q32Q07
STRING:Q32Q07 PhosphoSite:Q32Q07 Ensembl:ENSRNOT00000008879
GeneID:500280 KEGG:rno:500280 UCSC:RGD:1564145 InParanoid:Q32Q07
NextBio:705687 Genevestigator:Q32Q07 GermOnline:ENSRNOG00000006802
Uniprot:Q32Q07
Length = 716
Score = 118 (46.6 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 67/222 (30%), Positives = 96/222 (43%)
Query: 40 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSG 99
DL R TRI G L + ++ L+S NI T +++ L LT L Q + + + + G
Sbjct: 60 DL-RLTRIPGNLSSDTQVLLLQSNNI----AKTVDELQQLFNLTELDFSQNNFTNIKEVG 114
Query: 100 IAYXXXXXXXXXXXXEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV 159
+A + +T CL LS L L Y+N N Q+S FS + +L
Sbjct: 115 LANLTQLTTLHLEENQISEMTDYCLQDLSNLQEL-YINHN--QISSISANAFSGLKNLLR 171
Query: 160 LNLGFNEITDECLVHLKGLTNLESLNLDS---CGIGDEGLVNLTGLCNLKCLELSDTQVG 216
L+L N++ NLE L + GI D +N L NL+ L L+ +
Sbjct: 172 LHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGILD---MNFRPLSNLRSLVLAGMYLT 228
Query: 217 SSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 258
L GL +LES LSF D L K+ L+ K NL
Sbjct: 229 DIPGNALVGLDSLES--LSFY---DNKLIKVPQLALQKVPNL 265
Score = 42 (19.8 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 9/32 (28%), Positives = 20/32 (62%)
Query: 350 LVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 381
L SL ++N+ + + + ++ L NLR +++ S
Sbjct: 339 LESLMLNNNALNAVYQKTVESLPNLREISIHS 370
>UNIPROTKB|Q720U4 [details] [associations]
symbol:LMOf2365_1144 "Cell wall surface anchor family
protein" species:265669 "Listeria monocytogenes serotype 4b str.
F2365" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 Pfam:PF00746 GO:GO:0005618 eggNOG:COG4886
InterPro:IPR014756 SUPFAM:SSF81296 EMBL:AE017262
GenomeReviews:AE017262_GR InterPro:IPR025875 Pfam:PF12799
InterPro:IPR019948 InterPro:IPR019931 TIGRFAMs:TIGR01167
PROSITE:PS50847 Gene3D:2.60.40.1220 InterPro:IPR014755
InterPro:IPR012569 Pfam:PF08191 RefSeq:YP_013743.1
ProteinModelPortal:Q720U4 STRING:Q720U4 GeneID:2797620
KEGG:lmf:LMOf2365_1144 PATRIC:20323522 HOGENOM:HOG000085942
OMA:YILNYEY ProtClustDB:CLSK225142 Uniprot:Q720U4
Length = 511
Score = 115 (45.5 bits), Expect = 0.00099, P = 0.00099
Identities = 57/216 (26%), Positives = 99/216 (45%)
Query: 54 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYXXXXXXXXXXX 113
L L +LE + + N I SD+ P++ LT L SL + + I
Sbjct: 116 LSNLTQLEIIQMPR-NQI--SDLTPIANLTALMSLDFEFNNLQT--IEPIKNLKNMLELN 170
Query: 114 XEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 173
P++ + ++ + L +L + C++SD + ++ + G N I+D +
Sbjct: 171 VSANPISD--ISAVKNMTQLEFLTIRDCEVSD--LSPVENLSNMLMFWAGRNNISD--IT 224
Query: 174 HLKGLTNLESLNLDSCGIGDEGLV-NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 232
LK ++ L L+L I D ++ NLT +L+ ++ QV S + L+ T LE++
Sbjct: 225 PLKNMSKLLGLSLFGNQIKDVSVIKNLT---SLEDFDIKANQV--SDISSLATSTTLETL 279
Query: 233 NLSFTGISD-GSLRKLAGLSSLKSLN----LDARQI 263
LSF I D SL+ L L+ L+ N LDA ++
Sbjct: 280 TLSFNQIIDISSLKNLTNLTRLELANQTRVLDAVEV 315
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 406 350 0.0010 116 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 106
No. of states in DFA: 601 (64 KB)
Total size of DFA: 190 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.20u 0.10s 24.30t Elapsed: 00:00:01
Total cpu time: 24.23u 0.10s 24.33t Elapsed: 00:00:01
Start: Sat May 11 02:23:45 2013 End: Sat May 11 02:23:46 2013
WARNINGS ISSUED: 1