BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015457
(406 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BID8|FXL14_MOUSE F-box/LRR-repeat protein 14 OS=Mus musculus GN=Fbxl14 PE=2 SV=1
Length = 400
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 180/338 (53%), Gaps = 48/338 (14%)
Query: 79 LSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 137
+ G+ N++SL +S C +TD+G+ + + +GSL LN
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGH----------------------AFVQEIGSLRALN 123
Query: 138 LNRC-QLSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVHLK-GLTNLESLNLDSC-GIG 192
L+ C Q++D + ++ + L+VL LG + IT+ L+ + GL L+SLNL SC +
Sbjct: 124 LSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLS 183
Query: 193 DEGLVNLTGLCN--------LKCLELSDTQ-VGSSGLRHLS-GLTNLESINLSFTG-ISD 241
D G+ +L G+ L+ L L D Q + L+H+S GLT L +NLSF G ISD
Sbjct: 184 DVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISD 243
Query: 242 GSLRKLAGLSSLKSLNLDA-RQITDTGLA--ALTSLTGLTHLDL-FGARITDSGAAYL-R 296
L L+ + SL+SLNL + I+DTG+ A+ SL L+ LD+ F ++ D AY+ +
Sbjct: 244 AGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLR-LSGLDVSFCDKVGDQSLAYIAQ 302
Query: 297 NFKNLRSLEICGGGLTDAGV-KHIKDLSSLTLLNLSQNCNLTDKTLELIS-GLTGLVSLN 354
L+SL +C ++D G+ + ++ + L LN+ Q +TDK LELI+ L+ L ++
Sbjct: 303 GLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGID 362
Query: 355 VSN-SRITSAGLRHLKPLKNLRSLTLESCKVTANDIKR 391
+ +RIT GL + L L+ L L ++T ++ R
Sbjct: 363 LYGCTRITKRGLERITQLPCLKVLNLGLWQMTDSEKVR 400
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 158/306 (51%), Gaps = 32/306 (10%)
Query: 54 LKGLMKLESLNIKWCNCITDSDMKP--LSGLTNLKSLQIS-CSKVTDSGIA----YLKGL 106
++G+ +ESLN+ C +TD+ + + + +L++L +S C ++TDS + YLKGL
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 107 QKLTLLNLEGCP--VTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKI------GSL 157
+ +L L GC L L L LNL C+ LSD G + + G L
Sbjct: 146 E---VLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCL 202
Query: 158 KVLNLGFNE---ITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLEL-S 211
+ L + +TD L H+ +GLT L LNL C GI D GL++L+ + +L+ L L S
Sbjct: 203 GLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRS 262
Query: 212 DTQVGSSGLRHLS-GLTNLESINLSFTG-ISDGSLRKLA-GLSSLKSLNLDARQITDTGL 268
+ +G+ HL+ G L +++SF + D SL +A GL LKSL+L + I+D G+
Sbjct: 263 CDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGI 322
Query: 269 AALT-SLTGLTHLDLFG-ARITDSGAAYL-RNFKNLRSLEICG-GGLTDAGVKHIKDLSS 324
+ + GL L++ RITD G + + L +++ G +T G++ I L
Sbjct: 323 NRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERITQLPC 382
Query: 325 LTLLNL 330
L +LNL
Sbjct: 383 LKVLNL 388
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 124/246 (50%), Gaps = 34/246 (13%)
Query: 175 LKGLTNLESLNLDSC------GIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSG 225
++G+ N+ESLNL C G+G + + L L C +++D+ +G ++L G
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIA-QYLKG 144
Query: 226 LTNLE---SINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLT------ 275
L LE N++ TG+ L GL LKSLNL + R ++D G+ L +T
Sbjct: 145 LEVLELGGCSNITNTGL----LLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEG 200
Query: 276 --GLTHLDLFG-ARITDSGAAYL-RNFKNLR--SLEICGGGLTDAGVKHIKDLSSLTLLN 329
GL L L ++TD ++ R LR +L CGG ++DAG+ H+ + SL LN
Sbjct: 201 CLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGG-ISDAGLLHLSHMGSLRSLN 259
Query: 330 LSQNCNLTDK-TLELISGLTGLVSLNVSN-SRITSAGLRHL-KPLKNLRSLTLESCKVTA 386
L N++D + L G L L+VS ++ L ++ + L L+SL+L SC ++
Sbjct: 260 LRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISD 319
Query: 387 NDIKRL 392
+ I R+
Sbjct: 320 DGINRM 325
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 117/234 (50%), Gaps = 26/234 (11%)
Query: 7 GLSNLTSLSFRRNNAITAQGMKAFAGL--------INLVKLDLERCTRIHGGLVNL---- 54
GL L SL+ R ++ G+ AG+ + L +L L+ C + L +L
Sbjct: 167 GLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQK----LTDLSLKH 222
Query: 55 --KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLK-GLQKLT 110
+GL L LN+ +C I+D+ + LS + +L+SL + SC ++D+GI +L G +L+
Sbjct: 223 ISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLS 282
Query: 111 LLNLEGC-PVTAACLDSLS-ALGSLFYLNLNRCQLSDDGCEKF-SKIGSLKVLNLG-FNE 166
L++ C V L ++ L L L+L C +SDDG + ++ L+ LN+G
Sbjct: 283 GLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVR 342
Query: 167 ITDECLVHL-KGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSDTQVGSS 218
ITD+ L + + L+ L ++L C I GL +T L LK L L Q+ S
Sbjct: 343 ITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDS 396
>sp|Q17R01|FXL14_BOVIN F-box/LRR-repeat protein 14 OS=Bos taurus GN=FBXL14 PE=2 SV=1
Length = 400
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 180/338 (53%), Gaps = 48/338 (14%)
Query: 79 LSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 137
+ G+ N++SL +S C +TD+G+ + + +GSL LN
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGH----------------------AFVQEIGSLRALN 123
Query: 138 LNRC-QLSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVHLK-GLTNLESLNLDSC-GIG 192
L+ C Q++D + ++ + L+VL LG + IT+ L+ + GL L+SLNL SC +
Sbjct: 124 LSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLS 183
Query: 193 DEGLVNLTGLCN--------LKCLELSDTQ-VGSSGLRHLS-GLTNLESINLSFTG-ISD 241
D G+ +L G+ L+ L L D Q + L+H+S GLT L +NLSF G ISD
Sbjct: 184 DVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISD 243
Query: 242 GSLRKLAGLSSLKSLNLDA-RQITDTGLA--ALTSLTGLTHLDL-FGARITDSGAAYL-R 296
L L+ + SL+SLNL + I+DTG+ A+ SL L+ LD+ F ++ D AY+ +
Sbjct: 244 AGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLR-LSGLDVSFCDKVGDQSLAYIAQ 302
Query: 297 NFKNLRSLEICGGGLTDAGV-KHIKDLSSLTLLNLSQNCNLTDKTLELIS-GLTGLVSLN 354
L+SL +C ++D G+ + ++ + L LN+ Q +TDK LELI+ L+ L ++
Sbjct: 303 GLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGID 362
Query: 355 VSN-SRITSAGLRHLKPLKNLRSLTLESCKVTANDIKR 391
+ +RIT GL + L L+ L L ++T ++ R
Sbjct: 363 LYGCTRITKRGLERITQLPCLKVLNLGLWQMTDSEKVR 400
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 158/306 (51%), Gaps = 32/306 (10%)
Query: 54 LKGLMKLESLNIKWCNCITDSDMKP--LSGLTNLKSLQIS-CSKVTDSGIA----YLKGL 106
++G+ +ESLN+ C +TD+ + + + +L++L +S C ++TDS + YLKGL
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 107 QKLTLLNLEGCP--VTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKI------GSL 157
+ +L L GC L L L LNL C+ LSD G + + G L
Sbjct: 146 E---VLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCL 202
Query: 158 KVLNLGFNE---ITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLEL-S 211
+ L + +TD L H+ +GLT L LNL C GI D GL++L+ + +L+ L L S
Sbjct: 203 GLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRS 262
Query: 212 DTQVGSSGLRHLS-GLTNLESINLSFTG-ISDGSLRKLA-GLSSLKSLNLDARQITDTGL 268
+ +G+ HL+ G L +++SF + D SL +A GL LKSL+L + I+D G+
Sbjct: 263 CDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGI 322
Query: 269 AALT-SLTGLTHLDLFG-ARITDSGAAYL-RNFKNLRSLEICG-GGLTDAGVKHIKDLSS 324
+ + GL L++ RITD G + + L +++ G +T G++ I L
Sbjct: 323 NRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERITQLPC 382
Query: 325 LTLLNL 330
L +LNL
Sbjct: 383 LKVLNL 388
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 124/246 (50%), Gaps = 34/246 (13%)
Query: 175 LKGLTNLESLNLDSC------GIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSG 225
++G+ N+ESLNL C G+G + + L L C +++D+ +G ++L G
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIA-QYLKG 144
Query: 226 LTNLE---SINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLT------ 275
L LE N++ TG+ L GL LKSLNL + R ++D G+ L +T
Sbjct: 145 LEVLELGGCSNITNTGL----LLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEG 200
Query: 276 --GLTHLDLFG-ARITDSGAAYL-RNFKNLR--SLEICGGGLTDAGVKHIKDLSSLTLLN 329
GL L L ++TD ++ R LR +L CGG ++DAG+ H+ + SL LN
Sbjct: 201 CLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGG-ISDAGLLHLSHMGSLRSLN 259
Query: 330 LSQNCNLTDK-TLELISGLTGLVSLNVSN-SRITSAGLRHL-KPLKNLRSLTLESCKVTA 386
L N++D + L G L L+VS ++ L ++ + L L+SL+L SC ++
Sbjct: 260 LRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISD 319
Query: 387 NDIKRL 392
+ I R+
Sbjct: 320 DGINRM 325
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 117/234 (50%), Gaps = 26/234 (11%)
Query: 7 GLSNLTSLSFRRNNAITAQGMKAFAGL--------INLVKLDLERCTRIHGGLVNL---- 54
GL L SL+ R ++ G+ AG+ + L +L L+ C + L +L
Sbjct: 167 GLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQK----LTDLSLKH 222
Query: 55 --KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLK-GLQKLT 110
+GL L LN+ +C I+D+ + LS + +L+SL + SC ++D+GI +L G +L+
Sbjct: 223 ISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLS 282
Query: 111 LLNLEGC-PVTAACLDSLS-ALGSLFYLNLNRCQLSDDGCEKF-SKIGSLKVLNLG-FNE 166
L++ C V L ++ L L L+L C +SDDG + ++ L+ LN+G
Sbjct: 283 GLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVR 342
Query: 167 ITDECLVHL-KGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSDTQVGSS 218
ITD+ L + + L+ L ++L C I GL +T L LK L L Q+ S
Sbjct: 343 ITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDS 396
>sp|Q8N1E6|FXL14_HUMAN F-box/LRR-repeat protein 14 OS=Homo sapiens GN=FBXL14 PE=1 SV=1
Length = 418
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 114/351 (32%), Positives = 184/351 (52%), Gaps = 50/351 (14%)
Query: 79 LSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 137
+ G+ N++SL +S C +TD+G+ + + +GSL LN
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGH----------------------AFVQEIGSLRALN 123
Query: 138 LNRC-QLSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVHLK-GLTNLESLNLDSC-GIG 192
L+ C Q++D + ++ + L+VL LG + IT+ L+ + GL L+SLNL SC +
Sbjct: 124 LSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLS 183
Query: 193 DEGLVNLTGLCN--------LKCLELSDTQ-VGSSGLRHLS-GLTNLESINLSFTG-ISD 241
D G+ +L G+ L+ L L D Q + L+H+S GLT L +NLSF G ISD
Sbjct: 184 DVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISD 243
Query: 242 GSLRKLAGLSSLKSLNLDA-RQITDTGLA--ALTSLTGLTHLDL-FGARITDSGAAYL-R 296
L L+ + SL+SLNL + I+DTG+ A+ SL L+ LD+ F ++ D AY+ +
Sbjct: 244 AGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLR-LSGLDVSFCDKVGDQSLAYIAQ 302
Query: 297 NFKNLRSLEICGGGLTDAGV-KHIKDLSSLTLLNLSQNCNLTDKTLELIS-GLTGLVSLN 354
L+SL +C ++D G+ + ++ + L LN+ Q +TDK LELI+ L+ L ++
Sbjct: 303 GLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGID 362
Query: 355 VSN-SRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFR 404
+ +RIT GL + L L+ L L ++T D ++ D L + R
Sbjct: 363 LYGCTRITKRGLERITQLPCLKVLNLGLWQMT--DSEKEARGDFSPLFTVR 411
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 158/306 (51%), Gaps = 32/306 (10%)
Query: 54 LKGLMKLESLNIKWCNCITDSDMKP--LSGLTNLKSLQIS-CSKVTDSGIA----YLKGL 106
++G+ +ESLN+ C +TD+ + + + +L++L +S C ++TDS + YLKGL
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 107 QKLTLLNLEGCP--VTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKI------GSL 157
+ +L L GC L L L LNL C+ LSD G + + G L
Sbjct: 146 E---VLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCL 202
Query: 158 KVLNLGFNE---ITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLEL-S 211
+ L + +TD L H+ +GLT L LNL C GI D GL++L+ + +L+ L L S
Sbjct: 203 GLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRS 262
Query: 212 DTQVGSSGLRHLS-GLTNLESINLSFTG-ISDGSLRKLA-GLSSLKSLNLDARQITDTGL 268
+ +G+ HL+ G L +++SF + D SL +A GL LKSL+L + I+D G+
Sbjct: 263 CDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGI 322
Query: 269 AALT-SLTGLTHLDLFG-ARITDSGAAYL-RNFKNLRSLEICG-GGLTDAGVKHIKDLSS 324
+ + GL L++ RITD G + + L +++ G +T G++ I L
Sbjct: 323 NRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERITQLPC 382
Query: 325 LTLLNL 330
L +LNL
Sbjct: 383 LKVLNL 388
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 117/234 (50%), Gaps = 26/234 (11%)
Query: 7 GLSNLTSLSFRRNNAITAQGMKAFAGL--------INLVKLDLERCTRIHGGLVNL---- 54
GL L SL+ R ++ G+ AG+ + L +L L+ C + L +L
Sbjct: 167 GLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQK----LTDLSLKH 222
Query: 55 --KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLK-GLQKLT 110
+GL L LN+ +C I+D+ + LS + +L+SL + SC ++D+GI +L G +L+
Sbjct: 223 ISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLS 282
Query: 111 LLNLEGC-PVTAACLDSLS-ALGSLFYLNLNRCQLSDDGCEKF-SKIGSLKVLNLG-FNE 166
L++ C V L ++ L L L+L C +SDDG + ++ L+ LN+G
Sbjct: 283 GLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVR 342
Query: 167 ITDECLVHL-KGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSDTQVGSS 218
ITD+ L + + L+ L ++L C I GL +T L LK L L Q+ S
Sbjct: 343 ITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDS 396
>sp|Q723K6|INLA_LISMF Internalin-A OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=inlA PE=3 SV=1
Length = 800
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 161/348 (46%), Gaps = 55/348 (15%)
Query: 5 LSGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLN 64
L+ LSNLT L+ NN IT + L NL +L+L T + L GL L+ L+
Sbjct: 138 LANLSNLTGLTLF-NNQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLS 192
Query: 65 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACL 124
N +TD +KPL+ LT L+ L IS +KV+D + L KLT NLE T +
Sbjct: 193 F--GNQVTD--LKPLANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQI 241
Query: 125 DSLSALG---SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 181
++ LG +L L+LN QL D G + + +L L+L N+I++ L L GLT L
Sbjct: 242 SDITPLGILTNLDELSLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKL 297
Query: 182 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 241
L L + I + + L GL L LEL++ Q+ + +S L NL + L F ISD
Sbjct: 298 TELKLGANQISN--ISPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISD 353
Query: 242 ----GSLRK----------------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLD 281
SL K LA L+++ L+ QI+D L L +LT +T L
Sbjct: 354 ISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLG 411
Query: 282 LFGARITDSGAAYLRN------FKNLRSLEICGGGLTDAGVKHIKDLS 323
L T+ Y N KN+ I ++D G D++
Sbjct: 412 LNDQEWTNPPVNYKVNVSIPNTVKNVTGALIAPATISDGGSYAEPDIT 459
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 195/414 (47%), Gaps = 69/414 (16%)
Query: 24 AQGMKAFAGLINLV----KLDLERCTRIHGGLVNLKGLMKLESLN----IKWCN-CITD- 73
A+ MK G N+ + DL++ T + + +K + LE LN I + N +TD
Sbjct: 54 AEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDI 113
Query: 74 -------------------SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN- 113
+D+ PL+ L+NL L + +++TD + L+ LT LN
Sbjct: 114 TPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITD-----IDPLKNLTNLNR 168
Query: 114 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 173
LE T + + +LS L SL L+ Q++D + + + +L+ L++ N+++D +
Sbjct: 169 LELSSNTISDISALSGLTSLQQLSFGN-QVTD--LKPLANLTTLERLDISSNKVSDISV- 224
Query: 174 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 233
L LTNLESL + I D + L L NL L L+ Q+ G L+ LTNL ++
Sbjct: 225 -LAKLTNLESLIATNNQISD--ITPLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLD 279
Query: 234 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 293
L+ IS+ L L+GL+ L L L A QI++ ++ L LT LT+L+L ++ D +
Sbjct: 280 LANNQISN--LAPLSGLTKLTELKLGANQISN--ISPLAGLTALTNLELNENQLED--IS 333
Query: 294 YLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSL 353
+ N KNL L + ++D I +SSLT L Q + + +S L L ++
Sbjct: 334 PISNLKNLTYLTLYFNNISD-----ISPVSSLTKL---QRLFFYNNKVSDVSSLANLTNI 385
Query: 354 NVSNSRITSAG---LRHLKPLKNLRSLT---LESCKVTANDIKRLQSRDLPNLV 401
N SAG + L PL NL +T L + T + + +PN V
Sbjct: 386 N-----WLSAGHNQISDLTPLANLTRITQLGLNDQEWTNPPVNYKVNVSIPNTV 434
>sp|G2K3G6|INLA_LISM4 Internalin-A OS=Listeria monocytogenes serotype 1/2a (strain
10403S) GN=inlA PE=3 SV=1
Length = 800
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 162/348 (46%), Gaps = 55/348 (15%)
Query: 5 LSGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLN 64
L+ L+NLT L+ NN IT + L NL +L+L T + L GL L+ L+
Sbjct: 138 LANLTNLTGLTLF-NNQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLS 192
Query: 65 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACL 124
N +TD +KPL+ LT L+ L IS +KV+D + L KLT NLE T +
Sbjct: 193 F--GNQVTD--LKPLANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQI 241
Query: 125 DSLSALG---SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 181
++ LG +L L+LN QL D G + + +L L+L N+I++ L L GLT L
Sbjct: 242 SDITPLGILTNLDELSLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKL 297
Query: 182 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 241
L L + I + + L GL L LEL++ Q+ + +S L NL + L F ISD
Sbjct: 298 TELKLGANQISN--ISPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISD 353
Query: 242 ----GSLRK----------------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLD 281
SL K LA L+++ L+ QI+D L L +LT +T L
Sbjct: 354 ISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLG 411
Query: 282 LFGARITDSGAAYLRN------FKNLRSLEICGGGLTDAGVKHIKDLS 323
L T++ Y N KN+ I ++D G D++
Sbjct: 412 LNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYAEPDIT 459
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 188/392 (47%), Gaps = 66/392 (16%)
Query: 20 NAITAQGMKAFAGLINLV----KLDLERCTRIHGGLVNLKGLMKLESLN----IKWCN-C 70
+A A+ MK G N+ + DL++ T + + +K + LE LN I + N
Sbjct: 50 DAALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQ 109
Query: 71 ITD--------------------SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLT 110
+TD +D+ PL+ LTNL L + +++TD + L+ LT
Sbjct: 110 LTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITD-----IDPLKNLT 164
Query: 111 LLN-LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD 169
LN LE T + + +LS L +L L+ Q++D + + + +L+ L++ N+++D
Sbjct: 165 NLNRLELSSNTISDISALSGLTNLQQLSFGN-QVTD--LKPLANLTTLERLDISSNKVSD 221
Query: 170 ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 229
+ L LTNLESL + I D + L L NL L L+ Q+ G L+ LTNL
Sbjct: 222 ISV--LAKLTNLESLIATNNQISD--ITPLGILTNLDELSLNGNQLKDIGT--LASLTNL 275
Query: 230 ESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 289
++L+ IS+ L L+GL+ L L L A QI++ ++ L LT LT+L+L ++ D
Sbjct: 276 TDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--ISPLAGLTALTNLELNENQLED 331
Query: 290 SGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTG 349
+ + N KNL L + ++D I +SSLT L Q + + +S L
Sbjct: 332 --ISPISNLKNLTYLTLYFNNISD-----ISPVSSLTKL---QRLFFYNNKVSDVSSLAN 381
Query: 350 LVSLNVSNSRITSAG---LRHLKPLKNLRSLT 378
L ++N SAG + L PL NL +T
Sbjct: 382 LTNIN-----WLSAGHNQISDLTPLANLTRIT 408
>sp|P0DJM0|INLA_LISMO Internalin-A OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=inlA PE=1 SV=1
Length = 800
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 162/348 (46%), Gaps = 55/348 (15%)
Query: 5 LSGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLN 64
L+ L+NLT L+ NN IT + L NL +L+L T + L GL L+ L+
Sbjct: 138 LANLTNLTGLTLF-NNQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLS 192
Query: 65 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACL 124
N +TD +KPL+ LT L+ L IS +KV+D + L KLT NLE T +
Sbjct: 193 F--GNQVTD--LKPLANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQI 241
Query: 125 DSLSALG---SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 181
++ LG +L L+LN QL D G + + +L L+L N+I++ L L GLT L
Sbjct: 242 SDITPLGILTNLDELSLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKL 297
Query: 182 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 241
L L + I + + L GL L LEL++ Q+ + +S L NL + L F ISD
Sbjct: 298 TELKLGANQISN--ISPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISD 353
Query: 242 ----GSLRK----------------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLD 281
SL K LA L+++ L+ QI+D L L +LT +T L
Sbjct: 354 ISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLG 411
Query: 282 LFGARITDSGAAYLRN------FKNLRSLEICGGGLTDAGVKHIKDLS 323
L T++ Y N KN+ I ++D G D++
Sbjct: 412 LNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDIT 459
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 186/388 (47%), Gaps = 66/388 (17%)
Query: 24 AQGMKAFAGLINLV----KLDLERCTRIHGGLVNLKGLMKLESLN----IKWCN-CITD- 73
A+ MK G N+ + DL++ T + + +K + +E LN I + N +TD
Sbjct: 54 AEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDI 113
Query: 74 -------------------SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN- 113
+D+ PL+ LTNL L + +++TD + L+ LT LN
Sbjct: 114 TPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITD-----IDPLKNLTNLNR 168
Query: 114 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 173
LE T + + +LS L SL L+ Q++D + + + +L+ L++ N+++D +
Sbjct: 169 LELSSNTISDISALSGLTSLQQLSFGN-QVTD--LKPLANLTTLERLDISSNKVSDISV- 224
Query: 174 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 233
L LTNLESL + I D + L L NL L L+ Q+ G L+ LTNL ++
Sbjct: 225 -LAKLTNLESLIATNNQISD--ITPLGILTNLDELSLNGNQLKDIGT--LASLTNLTDLD 279
Query: 234 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 293
L+ IS+ L L+GL+ L L L A QI++ ++ L LT LT+L+L ++ D +
Sbjct: 280 LANNQISN--LAPLSGLTKLTELKLGANQISN--ISPLAGLTALTNLELNENQLED--IS 333
Query: 294 YLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSL 353
+ N KNL L + ++D I +SSLT L Q + + +S L L ++
Sbjct: 334 PISNLKNLTYLTLYFNNISD-----ISPVSSLTKL---QRLFFYNNKVSDVSSLANLTNI 385
Query: 354 NVSNSRITSAG---LRHLKPLKNLRSLT 378
N SAG + L PL NL +T
Sbjct: 386 N-----WLSAGHNQISDLTPLANLTRIT 408
>sp|Q723X5|INLI_LISMF Internalin-I OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=inlI PE=3 SV=1
Length = 1775
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 190/423 (44%), Gaps = 77/423 (18%)
Query: 3 ENLSGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLES 62
E L L NLTSL+ NN + L+NLV L+L + LVNL G
Sbjct: 173 EGLQYLENLTSLNLSENN---ISDLAPIKDLVNLVSLNLSS----NRTLVNLSG------ 219
Query: 63 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 122
+ GL NL+ L +S +K + I+ + L L ++ +GC +
Sbjct: 220 ----------------VEGLVNLQELNVSANKALED-ISQVAALPVLKEISAQGCNIKTL 262
Query: 123 CLDSLSA--LGSL--FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 178
LD+ + L L FYL N L+D +K+ LK L + N + + L LKG
Sbjct: 263 ELDNPAGAILPELETFYLQEN--DLTD--LTSLAKLPKLKNLYIKGN-ASLKSLATLKGA 317
Query: 179 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES-INLSFT 237
T L+ ++ +C E L +++GL L+ ++LS G S L+ ++ L +L + +N++
Sbjct: 318 TKLQLIDASNC-TDLETLGDISGLSELEMIQLS----GCSKLKEITSLKDLPNLVNITAD 372
Query: 238 GISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 296
+ L L L L++L L D + +T+ + A+T + L L L G IT G L
Sbjct: 373 SCAIEDLGTLNNLPKLQTLILSDNKDLTN--INAITDMPQLKTLALDGCGITSIGT--LD 428
Query: 297 NFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNC----------------NLTDKT 340
N L L++ LT + I DL L+ L++S N N++
Sbjct: 429 NLPKLEKLDLKENQLT--SISEINDLPRLSYLDVSVNYLTTIGELKKLPLLEWLNVSSNR 486
Query: 341 LELISGLTGLVSL---NVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDL 397
L +S LT SL NVSN+ I + G + L +L+ ++ V+ DI + D+
Sbjct: 487 LSDVSTLTNFPSLNYINVSNNVIRTVG--KMTELPSLKEFYAQNNNVS--DISMI--HDM 540
Query: 398 PNL 400
PNL
Sbjct: 541 PNL 543
Score = 40.0 bits (92), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 173/400 (43%), Gaps = 83/400 (20%)
Query: 54 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 113
L L KLE L++K + S+ ++ L L L +S + +T I LK L L LN
Sbjct: 427 LDNLPKLEKLDLKENQLTSISE---INDLPRLSYLDVSVNYLT--TIGELKKLPLLEWLN 481
Query: 114 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 173
+ ++ +L+ SL Y+N++ + G K +++ SLK N ++D ++
Sbjct: 482 VSSNRLSDVS--TLTNFPSLNYINVSNNVIRTVG--KMTELPSLKEFYAQNNNVSDISMI 537
Query: 174 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH----------- 222
H + NL ++ + I + G + L L+ L++ ++ ++ + H
Sbjct: 538 H--DMPNLRKVDASNNLITNIGTFD--NLPKLQNLDVHSNRITNTSVIHDLPSLETFYAQ 593
Query: 223 ---------LSGLTNLESINLSFTGISD----GSLRKLA------------------GLS 251
+ L L ++LSF I G L KL G+S
Sbjct: 594 NNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTMDGVS 653
Query: 252 SLKSLNLDARQITDTG----LAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 307
L++L L + TG L+AL+ LT LT L+L D+G Y+ + L +L
Sbjct: 654 KLRNLELQNNYLNYTGTEGNLSALSDLTNLTELNL-----RDNG--YISDISGLSTLSRL 706
Query: 308 GGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLN---VSNSRITSAG 364
D+ IKD+S+L+ L Q L + +E IS L+ L +LN +S ++I
Sbjct: 707 IYLNLDSN--KIKDISALSNLTTLQELTLENNQIEDISALSDLDNLNKLALSKNKII--- 761
Query: 365 LRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFR 404
+ P N+ + VTA++ Q+ LP ++S++
Sbjct: 762 --DISPAANMVN---RGASVTASN----QTYTLPTVLSYQ 792
>sp|P35859|ALS_RAT Insulin-like growth factor-binding protein complex acid labile
subunit OS=Rattus norvegicus GN=Igfals PE=1 SV=1
Length = 603
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 159/402 (39%), Gaps = 21/402 (5%)
Query: 5 LSGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLES 62
GLS+L L+ N+ + F GL NL +L L + T + L GL +L
Sbjct: 166 FQGLSHLWDLNLGWNSLVVLPD-TVFQGLGNLHELVLAGNKLTYLQPAL--FCGLGELRE 222
Query: 63 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 122
L++ N + L L+ L + + +T G++ L L+L V
Sbjct: 223 LDLS-RNALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGL 281
Query: 123 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 182
D+ L L L L ++ F + L+ L LG N I +GL LE
Sbjct: 282 MEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLE 341
Query: 183 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 242
L L+ I + + +GL N+ + LS + S R GL L S++L + +
Sbjct: 342 VLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHV 401
Query: 243 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 302
L AGLS L+ L L I+ +L L+ L LDL R+T + +L
Sbjct: 402 RLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLE 461
Query: 303 SLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITS 362
L + LT + + L L++S N +L L S L + L++ N+ + +
Sbjct: 462 YLLLSYNQLTTLSAEVLGPLQRAFWLDISHN-HLETLAEGLFSSLGRVRYLSLRNNSLQT 520
Query: 363 ----AGLRHLK----------PLKNLRSLTLESCKVTANDIK 390
GL L PLK LR L++ V ++
Sbjct: 521 FSPQPGLERLWLDANPWDCSCPLKALRDFALQNPGVVPRFVQ 562
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 147/385 (38%), Gaps = 29/385 (7%)
Query: 2 TENLSGLSNLTSLSFRRNNAIT-AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKL 60
+ L GL NL L RN A G+ + + L R+ GL +GL L
Sbjct: 115 PQALLGLQNLYYLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLEEGL--FQGLSHL 172
Query: 61 ESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 120
LN+ W + + D GL NL L ++ +K+T A GL
Sbjct: 173 WDLNLGWNSLVVLPDTV-FQGLGNLHELVLAGNKLTYLQPALFCGL-------------- 217
Query: 121 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 180
G L L+L+R L F + L+ L L N IT G+
Sbjct: 218 ----------GELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKA 267
Query: 181 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 240
L L+L + GL L L L+ + S R L LE + L I
Sbjct: 268 LRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIR 327
Query: 241 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKN 300
R GL L+ L L+ QIT+ + A + L + ++L G + +
Sbjct: 328 QLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDK 387
Query: 301 LRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRI 360
L SL + L + LS L L L N +++ + ++GL+ L+ L+++ +R+
Sbjct: 388 LHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDN-SISSIEEQSLAGLSELLELDLTTNRL 446
Query: 361 TSAGLRHLKPLKNLRSLTLESCKVT 385
T + + L +L L L ++T
Sbjct: 447 THLPRQLFQGLGHLEYLLLSYNQLT 471
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 127/322 (39%), Gaps = 26/322 (8%)
Query: 86 KSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 145
++L + + ++ A + L L LNL+G + + +L L +L+YL+L R +L +
Sbjct: 77 RALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYYLHLERNRLRN 136
Query: 146 DGCEKFSK------------------------IGSLKVLNLGFNEITDECLVHLKGLTNL 181
F+ + L LNLG+N + +GL NL
Sbjct: 137 LAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNL 196
Query: 182 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 241
L L + GL L+ L+LS + S L L+ + L I+
Sbjct: 197 HELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITA 256
Query: 242 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNL 301
+ G+ +L+ L+L ++ L GL L L I ++ L
Sbjct: 257 VAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFL 316
Query: 302 RSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRIT 361
L++ + G + + L L +L L+ N +T+ + SGL + +N+S + +
Sbjct: 317 EELQLGHNRIRQLGERTFEGLGQLEVLTLNDN-QITEVRVGAFSGLFNVAVMNLSGNCLR 375
Query: 362 SAGLRHLKPLKNLRSLTLE-SC 382
S R + L L SL LE SC
Sbjct: 376 SLPERVFQGLDKLHSLHLEHSC 397
>sp|P70389|ALS_MOUSE Insulin-like growth factor-binding protein complex acid labile
subunit OS=Mus musculus GN=Igfals PE=2 SV=1
Length = 603
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 154/402 (38%), Gaps = 21/402 (5%)
Query: 5 LSGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLES 62
GLS+L L+ N+ + F GL NL +L L + T + L L GL +L
Sbjct: 166 FRGLSHLWDLNLGWNSLVVLPD-TVFQGLGNLHELVLAGNKLTYLQPAL--LCGLGELRE 222
Query: 63 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 122
L++ N + L L+ L + + +T G++ L L+L V
Sbjct: 223 LDLS-RNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGL 281
Query: 123 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 182
D+ L L L L ++ F + L+ L LG N I +GL LE
Sbjct: 282 LEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLE 341
Query: 183 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 242
L L+ I + + GL N+ + LS + S GL L S++L + +
Sbjct: 342 VLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRI 401
Query: 243 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 302
L AGLS L+ L L I+ +L L+ L LDL ++T + L
Sbjct: 402 RLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGLGQLE 461
Query: 303 SLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSN----S 358
L + LT + L L+LS N L L S L L LN+ N +
Sbjct: 462 YLLLSNNQLTMLSEDVLGPLQRAFWLDLSHN-RLETPAEGLFSSLGRLRYLNLRNNSLQT 520
Query: 359 RITSAGLRHLK----------PLKNLRSLTLESCKVTANDIK 390
+ GL L PLK LR L++ V ++
Sbjct: 521 FVPQPGLERLWLDANPWDCSCPLKALRDFALQNPGVVPRFVQ 562
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 154/387 (39%), Gaps = 38/387 (9%)
Query: 6 SGLSNLTSLSFR--RNNAITAQGMKAFAGLINLVKLDLER--CTRIHGGLVNLKGLMKLE 61
+ NL+SL F + + + + +A GL NL L LER + GL + L
Sbjct: 92 AAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRSLAAGL--FRHTPSLA 149
Query: 62 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 121
SL++ N + + GL++L L + + + +GL L L L G +T
Sbjct: 150 SLSLG-NNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTY 208
Query: 122 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 181
L LG L L+L+R L F + L+ L L N IT G+ L
Sbjct: 209 LQPALLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKAL 268
Query: 182 ESLNLDSCGIGDEGLVN--LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 239
L+L + GL+ GL L L L+ + S R L LE + L I
Sbjct: 269 RWLDLSHNRVA--GLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRI 326
Query: 240 SDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK 299
+ GL L+ L L+ QI + + A L + ++L G
Sbjct: 327 RQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSG--------------N 372
Query: 300 NLRSLEICGGGLTDAGVKHI-KDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNS 358
LRSL +H+ + L L L+L +C L L +GL+GL L + ++
Sbjct: 373 CLRSLP-----------EHVFQGLGRLHSLHLEHSC-LGRIRLHTFAGLSGLRRLFLRDN 420
Query: 359 RITSAGLRHLKPLKNLRSLTLESCKVT 385
I+S + L L L L L + ++T
Sbjct: 421 SISSIEEQSLAGLSELLELDLTANQLT 447
>sp|Q8YA32|INLI_LISMO Internalin-I OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=inlI PE=4 SV=1
Length = 1778
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 196/468 (41%), Gaps = 111/468 (23%)
Query: 3 ENLSGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG---LMK 59
E L L NLTSL+ NN + L+NLV L+L + LVNL G L+
Sbjct: 176 EGLQYLENLTSLNLSENN---ISDLAPLKDLVNLVSLNLSS----NRTLVNLSGVEDLVN 228
Query: 60 LESLNIKWCNCITD-SDMKPLSGLT-------NLKSLQI--------------------- 90
L+ LN+ + D S + L L N+K+L++
Sbjct: 229 LQELNVSANKALEDISQVASLPVLKEISAQGCNIKTLELKNPAGAVLPELETFYLQENDL 288
Query: 91 ----SCSKVTDSGIAYLKGLQKL-TLLNLEGCP----VTAACLDSLSALGSLFYLN-LNR 140
S +K+ Y+KG L +L L G + A+ L LG + L+ L
Sbjct: 289 TNLTSLAKLPKLKNLYIKGNASLKSLETLNGATKLQLIDASNCTDLETLGDISGLSELEM 348
Query: 141 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT 200
QLS GC K +I S LK L NL ++ DSC I D G +N
Sbjct: 349 IQLS--GCSKLKEITS------------------LKNLPNLVNITADSCAIEDLGTLN-- 386
Query: 201 GLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN-LSFTGISDGSLRKLAGLSSLKSLNLD 259
L L+ L LSD + L +++ +T+L + L+ G S+ L L L+ L+L
Sbjct: 387 NLPKLQTLVLSDNE----NLTNITAITDLPQLKTLTLDGCGITSIGTLDNLPKLEKLDLK 442
Query: 260 ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHI 319
QI T ++ +T L L++LD+ +T G L+ L L + L+D V +
Sbjct: 443 ENQI--TSISEITDLPRLSYLDVSVNNLTTIGD--LKKLPLLEWLNVSSNRLSD--VSTL 496
Query: 320 KDLSSLTLLNLS---------------------QNCNLTDKTLELISGLTGLVSLNVSNS 358
+ SL +N+S QN +++D + +I + L ++ SN+
Sbjct: 497 TNFPSLNYINISNNVIRTVGKMTELPSLKEFYAQNNSISD--ISMIHDMPNLRKVDASNN 554
Query: 359 RITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFRPE 406
IT+ G L L+SL + S ++T+ + DLP+L +F +
Sbjct: 555 LITNIGT--FDNLPKLQSLDVHSNRITSTSV----IHDLPSLETFNAQ 596
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 192/434 (44%), Gaps = 70/434 (16%)
Query: 3 ENLSGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLD-LERCTRIHGGLVNLKGLMKLE 61
ENL+ ++ +T L + + G+ + L NL KL+ L+ + + L +L
Sbjct: 400 ENLTNITAITDLPQLKTLTLDGCGITSIGTLDNLPKLEKLDLKENQITSISEITDLPRLS 459
Query: 62 SLNIKWCNCITDSDMK--PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPV 119
L++ N T D+K PL L+ L +S ++++D ++ L L +N+ +
Sbjct: 460 YLDVSVNNLTTIGDLKKLPL-----LEWLNVSSNRLSD--VSTLTNFPSLNYINISNNVI 512
Query: 120 -TAACLDSLSALGSLF--------------YLNLNRCQLSDD---GCEKFSKIGSLKVLN 161
T + L +L + NL + S++ F + L+ L+
Sbjct: 513 RTVGKMTELPSLKEFYAQNNSISDISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLD 572
Query: 162 LGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 221
+ N IT ++H L +LE+ N + I + G ++ L +L + LS ++ S L
Sbjct: 573 VHSNRITSTSVIH--DLPSLETFNAQTNLITNIGTMD--NLPDLTYVNLSFNRIPS--LA 626
Query: 222 HLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTG----LAALTSLTGL 277
+ L NLE++ +S SL + G+ L+ L+L + TG L++L+ LT L
Sbjct: 627 PIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYLNYTGTEGNLSSLSDLTNL 686
Query: 278 THLDLFGARITD--SGAAYLRN--FKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQN 333
T L+L D SG + L + NL S I+D+S+L+ L Q
Sbjct: 687 TELNLRNNVYIDDISGLSTLSRLIYLNLDS-------------NKIEDISALSNLTNLQE 733
Query: 334 CNLTDKTLELISGLTGLVSLN---VSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIK 390
L + +E IS L+ L +LN VS ++I + P+ N+ + VTA++
Sbjct: 734 LTLENNKIENISALSDLENLNKLVVSKNKII-----DISPVANMVN---RGAIVTASN-- 783
Query: 391 RLQSRDLPNLVSFR 404
Q+ LP ++S++
Sbjct: 784 --QTYTLPTVLSYQ 795
>sp|P26337|ESA8C_TRYEQ Putative adenylate cyclase regulatory protein OS=Trypanosoma
equiperdum GN=ESAG8C PE=2 SV=1
Length = 630
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 184/431 (42%), Gaps = 89/431 (20%)
Query: 25 QGMKAFAGLINLVKLDLERCTRIHG-------GLVNLKGL-MKLESLNIKWCNCITDSDM 76
Q + A L L LDL C + L NL+ L MK +N WC+ I
Sbjct: 125 QDLTALRDLEALEDLDLSECANLELRELMVVLTLRNLRKLRMKRTMVNDMWCSSI----- 179
Query: 77 KPLSGLTNLKSLQISCSK-VTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 134
L L L++ S+ VTD +G+ LK L+ L+L + C D + AL L
Sbjct: 180 ---GLLKFLVHLEVDGSRGVTDITGLCRLKTLEALSL---DSCINITKGFDKICALPQLT 233
Query: 135 YLNLNRCQLSDDGCEKFSKIGSLKVLNLG-FNEITDECLVHLKGLTNLESLNLDSCGIGD 193
L+L + ++D G LKVL +EITD L + G+ +LE L+L C
Sbjct: 234 SLSLCQTNVTDKDLRCIHPDGKLKVLRYSSCHEITD--LTAIGGMRSLEKLSLSGCWNVT 291
Query: 194 EGLVNLTGLCNLKCLELSDTQVGSSG----------------------LRHLSGLTNLES 231
+GL L NL+ L++S V S L L L NL+
Sbjct: 292 KGLEELCKFSNLRELDISGCLVLGSAVVLKNLINLKVLSVSNCKNFKDLNGLERLVNLDK 351
Query: 232 INLS-FTGISDGSLRKLAGLSSLKSLNL------------------------DARQITDT 266
+NLS G+S SL +A LS+LK L++ D + T+
Sbjct: 352 LNLSGCHGVS--SLGFVANLSNLKELDISGCESLVCFDGLQDLNNLEVLYLRDVKSFTNV 409
Query: 267 GLAALTSLTGLTHLDLFGA-RITD-SGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSS 324
G A+ +L+ + LDL G RIT SG L+ + L SLE CG ++ I L
Sbjct: 410 G--AIKNLSKMRELDLSGCERITSLSGLETLKGLEEL-SLEGCGEIMS---FDPIWSLHH 463
Query: 325 LTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE--SC 382
L +L +S+ NL D L + G+TGL L + R + + P+ NLR++ + SC
Sbjct: 464 LRVLYVSECGNLED--LSGLEGITGLEELYLHGCRKCT----NFGPIWNLRNVCVVELSC 517
Query: 383 KVTANDIKRLQ 393
D+ LQ
Sbjct: 518 CENLEDLSGLQ 528
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 125/281 (44%), Gaps = 15/281 (5%)
Query: 108 KLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNE 166
+ +LNL GC L +L L +L L+L+ C L + +L+ L +
Sbjct: 111 RWKILNLSGCGSELQDLTALRDLEALEDLDLSECANLELRELMVVLTLRNLRKLRMKRTM 170
Query: 167 ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE---LSDTQVGSSGLRHL 223
+ D + L L L +D G G+ ++TGLC LK LE L + G +
Sbjct: 171 VNDMWCSSIGLLKFLVHLEVD----GSRGVTDITGLCRLKTLEALSLDSCINITKGFDKI 226
Query: 224 SGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDL 282
L L S++L T ++D LR + LK L + +ITD L A+ + L L L
Sbjct: 227 CALPQLTSLSLCQTNVTDKDLRCIHPDGKLKVLRYSSCHEITD--LTAIGGMRSLEKLSL 284
Query: 283 FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLE 342
G G L F NLR L+I G + + V +K+L +L +L++S N D L
Sbjct: 285 SGCWNVTKGLEELCKFSNLRELDISGCLVLGSAVV-LKNLINLKVLSVSNCKNFKD--LN 341
Query: 343 LISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 383
+ L L LN+S S+ L + L NL+ L + C+
Sbjct: 342 GLERLVNLDKLNLSGCHGVSS-LGFVANLSNLKELDISGCE 381
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 90/216 (41%), Gaps = 22/216 (10%)
Query: 184 LNLDSCGIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLS---GLTNLESINLSFTGI 239
LNL CG L +LT L +L+ LE D ++ + LR L L NL + + T +
Sbjct: 115 LNLSGCG---SELQDLTALRDLEALEDLDLSECANLELRELMVVLTLRNLRKLRMKRTMV 171
Query: 240 SDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF- 298
+D + L L L +D G +T +TGL L A DS + F
Sbjct: 172 NDMWCSSIGLLKFLVHLEVD-------GSRGVTDITGLCRLKTLEALSLDSCINITKGFD 224
Query: 299 -----KNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSL 353
L SL +C +TD ++ I L +L S +TD L I G+ L L
Sbjct: 225 KICALPQLTSLSLCQTNVTDKDLRCIHPDGKLKVLRYSSCHEITD--LTAIGGMRSLEKL 282
Query: 354 NVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDI 389
++S + GL L NLR L + C V + +
Sbjct: 283 SLSGCWNVTKGLEELCKFSNLRELDISGCLVLGSAV 318
>sp|Q8LB33|FB330_ARATH F-box protein At3g58530 OS=Arabidopsis thaliana GN=At3g58530 PE=2
SV=1
Length = 353
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 32/247 (12%)
Query: 119 VTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKI-GSLKVLNLGFN-EITDECLVHL 175
V C D AL SL +LNLN CQ +SD+G E + I LKV ++ +N +TD + +L
Sbjct: 102 VKTECPD---ALLSLEWLNLNVCQKISDNGIEAITSICPKLKVFSIYWNVRVTDAGIRNL 158
Query: 176 -KGLTNLESLNLDSC--------GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGL 226
K ++ LNL C + E +L L +C++++D + L+ L
Sbjct: 159 VKNCRHITDLNLSGCKSLTDKSMQLVAESYPDLESLNITRCVKITDDGL----LQVLQKC 214
Query: 227 TNLESINL-SFTGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDL-F 283
+L+++NL + +G +D + K++ L+ L+ L++ A+ I+D G+ + L L+L +
Sbjct: 215 FSLQTLNLYALSGFTDKAYMKISLLADLRFLDICGAQNISDEGIGHIAKCNKLESLNLTW 274
Query: 284 GARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLEL 343
RITD+G + N + SLE L+ G+ + D L LSQ C+ T TL+
Sbjct: 275 CVRITDAGVNTIAN--SCTSLEF----LSLFGIVGVTDRC---LETLSQTCSTTLTTLD- 324
Query: 344 ISGLTGL 350
++G TG+
Sbjct: 325 VNGCTGI 331
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 151 FSKIGSLKVLNLGFNE-ITDECLVHLK--------GLTNLESLNLDSCG-IGDEGLVNLT 200
+ +K +NL F + + D HLK L +LE LNL+ C I D G+ +T
Sbjct: 77 LPRYRQVKHINLEFAQGVVDS---HLKLVKTECPDALLSLEWLNLNVCQKISDNGIEAIT 133
Query: 201 GLC-NLKCLELS-DTQVGSSGLRHL-SGLTNLESINLS-FTGISDGSLRKLA-GLSSLKS 255
+C LK + + +V +G+R+L ++ +NLS ++D S++ +A L+S
Sbjct: 134 SICPKLKVFSIYWNVRVTDAGIRNLVKNCRHITDLNLSGCKSLTDKSMQLVAESYPDLES 193
Query: 256 LNLD-ARQITDTGL-AALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICGG-GL 311
LN+ +ITD GL L L L+L+ + TD + +LR L+ICG +
Sbjct: 194 LNITRCVKITDDGLLQVLQKCFSLQTLNLYALSGFTDKAYMKISLLADLRFLDICGAQNI 253
Query: 312 TDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELIS 345
+D G+ HI + L LNL+ +TD + I+
Sbjct: 254 SDEGIGHIAKCNKLESLNLTWCVRITDAGVNTIA 287
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 87/182 (47%), Gaps = 34/182 (18%)
Query: 56 GLMKLESLNIKWCNCITDSDMKPLSGL-TNLKSLQISCS-KVTDSGIAYL-KGLQKLTLL 112
L+ LE LN+ C I+D+ ++ ++ + LK I + +VTD+GI L K + +T L
Sbjct: 109 ALLSLEWLNLNVCQKISDNGIEAITSICPKLKVFSIYWNVRVTDAGIRNLVKNCRHITDL 168
Query: 113 NLEGCP-VTAACLDSLS-ALGSLFYLNLNRC-QLSDDGC-EKFSKIGSLKVLNL----GF 164
NL GC +T + ++ + L LN+ RC +++DDG + K SL+ LNL GF
Sbjct: 169 NLSGCKSLTDKSMQLVAESYPDLESLNITRCVKITDDGLLQVLQKCFSLQTLNLYALSGF 228
Query: 165 NE----------------------ITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTG 201
+ I+DE + H+ LESLNL C I D G+ +
Sbjct: 229 TDKAYMKISLLADLRFLDICGAQNISDEGIGHIAKCNKLESLNLTWCVRITDAGVNTIAN 288
Query: 202 LC 203
C
Sbjct: 289 SC 290
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 88/167 (52%), Gaps = 37/167 (22%)
Query: 214 QVGSSGLRHLSGLT-----NLESINLSFT-GISDGSLRKLA-----GLSSLKSLNLDA-R 261
++ ++G R L+ L+ ++ INL F G+ D L+ + L SL+ LNL+ +
Sbjct: 63 EMTNAGDRLLAALSLPRYRQVKHINLEFAQGVVDSHLKLVKTECPDALLSLEWLNLNVCQ 122
Query: 262 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKH-IK 320
+I+D G+ A+TS+ L +F + N+R +TDAG+++ +K
Sbjct: 123 KISDNGIEAITSICP--KLKVFSI------------YWNVR--------VTDAGIRNLVK 160
Query: 321 DLSSLTLLNLSQNCNLTDKTLELIS-GLTGLVSLNVSNS-RITSAGL 365
+ +T LNLS +LTDK+++L++ L SLN++ +IT GL
Sbjct: 161 NCRHITDLNLSGCKSLTDKSMQLVAESYPDLESLNITRCVKITDDGL 207
>sp|Q149C3|LIGO4_MOUSE Leucine-rich repeat and immunoglobulin-like domain containing-NOGO
receptor-interacting protein 4 OS=Mus musculus GN=Lingo4
PE=2 SV=2
Length = 593
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 126/290 (43%), Gaps = 15/290 (5%)
Query: 79 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP---VTAACLDSLSALGSLFY 135
LS L L+ L +S ++++ GLQ L L L+G V L+AL +L
Sbjct: 80 LSRLGQLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLTAL-TLLD 138
Query: 136 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG---IG 192
L LN+ L DG FS++GSL+ L +G N + GL L ++ L+ C +
Sbjct: 139 LRLNQIVLFLDGA--FSELGSLQQLEVGDNHLVFVAPGAFAGLAKLSTITLERCNLSTVP 196
Query: 193 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL-SFTGISDGSLRKLAGLS 251
L L L L+ EL ++ + LR L L LE + S + GSL L
Sbjct: 197 GLALAQLPALVALRLRELDIERLPAGALRGLGQLKELEIHHWPSLEALDPGSLVGL---- 252
Query: 252 SLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGL 311
+L SL + ++ AL L+ L LDL I+ A L L+ L + G L
Sbjct: 253 NLSSLAITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPARRLSPLVRLQELRLSGACL 312
Query: 312 TDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRIT 361
T L++ LL+++ N T + S LV+L +S + +T
Sbjct: 313 TSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSP-DKLVTLRLSGNPLT 361
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 104/242 (42%), Gaps = 15/242 (6%)
Query: 152 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELS 211
S++G L+ L+L +N+++ GL +L +L L + G +GL L L+L
Sbjct: 81 SRLGQLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLTALTLLDLR 140
Query: 212 DTQVG---SSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGL 268
Q+ L L LE + ++ G+ AGL+ L ++ L+ ++
Sbjct: 141 LNQIVLFLDGAFSELGSLQQLEVGDNHLVFVAPGAF---AGLAKLSTITLERCNLSTVPG 197
Query: 269 AALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLL 328
AL L L L L I A LR L+ LEI +A D SL L
Sbjct: 198 LALAQLPALVALRLRELDIERLPAGALRGLGQLKELEIHHWPSLEA-----LDPGSLVGL 252
Query: 329 NLSQ----NCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 384
NLS CNL+ + + L+ L L++S + I++ R L PL L+ L L +
Sbjct: 253 NLSSLAITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPARRLSPLVRLQELRLSGACL 312
Query: 385 TA 386
T+
Sbjct: 313 TS 314
Score = 36.6 bits (83), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 75/195 (38%), Gaps = 27/195 (13%)
Query: 19 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 78
+N + AFAGL L + LERC L + GL
Sbjct: 165 DNHLVFVAPGAFAGLAKLSTITLERCN-----LSTVPGLA-------------------- 199
Query: 79 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG-SLFYLN 137
L+ L L +L++ + L+GL +L L + P A LD S +G +L L
Sbjct: 200 LAQLPALVALRLRELDIERLPAGALRGLGQLKELEIHHWPSLEA-LDPGSLVGLNLSSLA 258
Query: 138 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 197
+ RC LS + + L++L+L N I+ L L L+ L L +
Sbjct: 259 ITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPARRLSPLVRLQELRLSGACLTSIAAH 318
Query: 198 NLTGLCNLKCLELSD 212
GL L+++D
Sbjct: 319 AFHGLTAFHLLDVAD 333
>sp|Q91ZZ5|RXFP2_MOUSE Relaxin receptor 2 OS=Mus musculus GN=Rxfp2 PE=2 SV=2
Length = 737
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 115/277 (41%), Gaps = 32/277 (11%)
Query: 9 SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC 68
SN+T LS ++N I +K F+ L K+ L+
Sbjct: 120 SNVTLLSLKKNK-IHRLPVKVFSRYTELRKIYLQH------------------------- 153
Query: 69 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 128
NCIT + GL NL+ L +S + +T K L +L L L+ P+T S
Sbjct: 154 NCITHISRRAFLGLHNLQILYLSHNCITSLRPGIFKDLHQLAWLILDDNPITRISQKSFM 213
Query: 129 ALGSLFYLNL--NRCQ-LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 185
L SLF+L++ NR + L + C + ++ + + N G IT+ + LT L L
Sbjct: 214 GLNSLFFLSMVGNRLEALPETLCAQMPQLNWVDLANNGIKYITNSTFLTCDSLTVL-FLP 272
Query: 186 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 245
+ G E + L NL L+LS + + S L L+ +NLS +
Sbjct: 273 RNQIGFVPEK--TFSSLKNLGELDLSSNMITKLPVHLFSDLHLLQKLNLSSNPLLYVHKN 330
Query: 246 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 282
+ L L+SL+L+ +I + + L+H+ L
Sbjct: 331 QFGSLKQLQSLDLERIEIPNISTGMFQPMKNLSHIYL 367
>sp|O94898|LRIG2_HUMAN Leucine-rich repeats and immunoglobulin-like domains protein 2
OS=Homo sapiens GN=LRIG2 PE=2 SV=3
Length = 1065
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 133/301 (44%), Gaps = 13/301 (4%)
Query: 69 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT---AACLD 125
N I + + + L L+SL +S + +++ + +Q L LNL +T A C D
Sbjct: 130 NIIPEINAQALQFYPALESLDLSSNIISEIKTSSFPRMQ-LKYLNLSNNRITTLEAGCFD 188
Query: 126 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 185
+LS+ SL + LNR ++S + F K+ L+ L L N I + +GL +L SL
Sbjct: 189 NLSS--SLLVVKLNRNRMSMIPPKIF-KLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLK 245
Query: 186 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 245
+ GI GL N++ LEL + L GL L+ + +S I S
Sbjct: 246 MQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPD 305
Query: 246 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 305
L L+L Q+T +A L+ L L+L R+T R NL++L+
Sbjct: 306 AWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLD 365
Query: 306 I----CGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRIT 361
+ + DA + L+SLT L L N + T + GL L L+++N+ I
Sbjct: 366 LRNNEISWAIEDAS-EAFAGLTSLTKLILQGN-QIKSITKKAFIGLESLEHLDLNNNAIM 423
Query: 362 S 362
S
Sbjct: 424 S 424
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 117/293 (39%), Gaps = 49/293 (16%)
Query: 8 LSNLTSLSFRR---------NNAITAQGMKAFAGLIN---LVKLDLERCTRIHGGLVNLK 55
+S + + SF R NN IT F L + +VKL+ R + I + L
Sbjct: 156 ISEIKTSSFPRMQLKYLNLSNNRITTLEAGCFDNLSSSLLVVKLNRNRMSMIPPKIFKLP 215
Query: 56 GL--MKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS---CSKVTDSGIAYLKGLQKLT 110
L ++L+ IK +T GL +L+SL++ SK+ D L +++L
Sbjct: 216 HLQFLELKRNRIKIVEGLT------FQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELE 269
Query: 111 LLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGFNEITD 169
L + V L L L L Y++ N + +S D E + L L+L +N++T
Sbjct: 270 LEHNNLTRVNKGWLYGLRMLQQL-YVSQNAIERISPDAWEFCQR---LSELDLSYNQLTR 325
Query: 170 ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 229
GL+ LE LNL GD + T + R LS L L
Sbjct: 326 LDESAFVGLSLLERLNL-----GDNRV----------------THIADGVFRFLSNLQTL 364
Query: 230 ESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 282
+ N + + + AGL+SL L L QI A L L HLDL
Sbjct: 365 DLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDL 417
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 29/235 (12%)
Query: 8 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKW 67
L +L L +RN +G+ F GL +L L ++R G+ KL+
Sbjct: 214 LPHLQFLELKRNRIKIVEGL-TFQGLDSLRSLKMQR-----------NGISKLKD----- 256
Query: 68 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 127
GL N++ L++ + +T +L GL+ L L + + D+
Sbjct: 257 ---------GAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAW 307
Query: 128 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 187
L L+L+ QL+ F + L+ LNLG N +T + L+NL++L+L
Sbjct: 308 EFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLR 367
Query: 188 SCGIG---DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 239
+ I ++ GL +L L L Q+ S + GL +LE ++L+ I
Sbjct: 368 NNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNNNAI 422
Score = 32.3 bits (72), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 1/139 (0%)
Query: 247 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 306
GL SL+SL + I+ A L + L+L +T +L + L+ L +
Sbjct: 235 FQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYV 294
Query: 307 CGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLR 366
+ + L+ L+LS N LT GL+ L LN+ ++R+T
Sbjct: 295 SQNAIERISPDAWEFCQRLSELDLSYN-QLTRLDESAFVGLSLLERLNLGDNRVTHIADG 353
Query: 367 HLKPLKNLRSLTLESCKVT 385
+ L NL++L L + +++
Sbjct: 354 VFRFLSNLQTLDLRNNEIS 372
>sp|P23799|ESAG8_TRYBB Putative adenylate cyclase regulatory protein OS=Trypanosoma brucei
brucei GN=ESAG8 PE=2 SV=1
Length = 630
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 129/431 (29%), Positives = 187/431 (43%), Gaps = 89/431 (20%)
Query: 25 QGMKAFAGLINLVKLDLERCTRIHG-------GLVNLKGL-MKLESLNIKWCNCITDSDM 76
Q + A L L LDL C + L NL+ L MK +N WC+ I
Sbjct: 125 QDLTALRDLEALEDLDLSECANLELRELMVVLTLRNLRKLRMKRTMVNDMWCSSI----- 179
Query: 77 KPLSGLTNLKSLQISCSK-VTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 134
L L L++ S+ VTD +G+ LK L+ L+L N C D + AL L
Sbjct: 180 ---GLLKFLVHLEVDGSRGVTDITGLFRLKTLEALSLDN---CINITKGFDKICALPQLT 233
Query: 135 YLNLNRCQLSDDGCEKFSKIGSLKVLNLG-FNEITDECLVHLKGLTNLESLNLDSCGIGD 193
L+L + ++D G LK+L++ +EITD L + G+ +LE L+L C
Sbjct: 234 SLSLCQTNVTDKDLRCIHPDGKLKMLDISSCHEITD--LTAIGGVRSLEKLSLSGCWNVT 291
Query: 194 EGLVNLTGLCNLKCLELSDTQVGSSG----------------------LRHLSGLTNLES 231
+GL L NL+ L++S V S L L L NLE
Sbjct: 292 KGLEELCKFSNLRELDISGCLVLGSAVVLKNLINLKVLSVSNCKNFKDLNGLERLVNLEK 351
Query: 232 INLS-FTGISDGSLRKLAGLSSLKSLNL------------------------DARQITDT 266
+NLS G+S SL +A LS+LK L++ D + T+
Sbjct: 352 LNLSGCHGVS--SLGFVANLSNLKELDISGCESLVCFDGLQDLNNLEVLYLRDVKSFTNV 409
Query: 267 GLAALTSLTGLTHLDLFGA-RITD-SGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSS 324
G A+ +L+ + LDL G RIT SG L+ + L SLE CG ++ I L
Sbjct: 410 G--AIKNLSKMRELDLSGCERITSLSGLETLKGLEEL-SLEGCGEIMS---FDPIWSLYH 463
Query: 325 LTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSL-TLE-SC 382
L +L +S+ NL D L + LTGL + + R + + P+ NLR++ LE SC
Sbjct: 464 LRVLYVSECGNLED--LSGLQCLTGLEEMYLHGCRKCT----NFGPIWNLRNVCVLELSC 517
Query: 383 KVTANDIKRLQ 393
+D+ LQ
Sbjct: 518 CENLDDLSGLQ 528
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 127/281 (45%), Gaps = 15/281 (5%)
Query: 108 KLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNE 166
+ +LNL GC L +L L +L L+L+ C L + +L+ L +
Sbjct: 111 RWKILNLSGCGSELQDLTALRDLEALEDLDLSECANLELRELMVVLTLRNLRKLRMKRTM 170
Query: 167 ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE---LSDTQVGSSGLRHL 223
+ D + L L L +D G G+ ++TGL LK LE L + + G +
Sbjct: 171 VNDMWCSSIGLLKFLVHLEVD----GSRGVTDITGLFRLKTLEALSLDNCINITKGFDKI 226
Query: 224 SGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDL 282
L L S++L T ++D LR + LK L++ + +ITD L A+ + L L L
Sbjct: 227 CALPQLTSLSLCQTNVTDKDLRCIHPDGKLKMLDISSCHEITD--LTAIGGVRSLEKLSL 284
Query: 283 FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLE 342
G G L F NLR L+I G + + V +K+L +L +L++S N D L
Sbjct: 285 SGCWNVTKGLEELCKFSNLRELDISGCLVLGSAVV-LKNLINLKVLSVSNCKNFKD--LN 341
Query: 343 LISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 383
+ L L LN+S S+ L + L NL+ L + C+
Sbjct: 342 GLERLVNLEKLNLSGCHGVSS-LGFVANLSNLKELDISGCE 381
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 184 LNLDSCGIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLS---GLTNLESINLSFTGI 239
LNL CG L +LT L +L+ LE D ++ + LR L L NL + + T +
Sbjct: 115 LNLSGCG---SELQDLTALRDLEALEDLDLSECANLELRELMVVLTLRNLRKLRMKRTMV 171
Query: 240 SDGSLRKLAGLSSLKSLNLD-ARQITD-TGLAALTSLTGLTHLDLFGARITDSGAAYLRN 297
+D + L L L +D +R +TD TGL L +L L+ L G +
Sbjct: 172 NDMWCSSIGLLKFLVHLEVDGSRGVTDITGLFRLKTLEALS---LDNCINITKGFDKICA 228
Query: 298 FKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSN 357
L SL +C +TD ++ I L +L++S +TD L I G+ L L++S
Sbjct: 229 LPQLTSLSLCQTNVTDKDLRCIHPDGKLKMLDISSCHEITD--LTAIGGVRSLEKLSLSG 286
Query: 358 SRITSAGLRHLKPLKNLRSLTLESCKVTANDI 389
+ GL L NLR L + C V + +
Sbjct: 287 CWNVTKGLEELCKFSNLRELDISGCLVLGSAV 318
>sp|Q6UY18|LIGO4_HUMAN Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 4 OS=Homo sapiens GN=LINGO4
PE=2 SV=1
Length = 593
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 126/290 (43%), Gaps = 15/290 (5%)
Query: 79 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT---AACLDSLSALGSLFY 135
LS L+ L+ L +S ++++ GLQ L L L+G + LSAL +L
Sbjct: 80 LSRLSLLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLSAL-TLLD 138
Query: 136 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG---IG 192
L LN+ L DG F ++GSL+ L +G N + GL L +L L+ C +
Sbjct: 139 LRLNQIVLFLDGA--FGELGSLQKLEVGDNHLVFVAPGAFAGLAKLSTLTLERCNLSTVP 196
Query: 193 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE-SINLSFTGISDGSLRKLAGLS 251
L L L L+ EL ++ + LR L L LE + S + GSL L
Sbjct: 197 GLALARLPALVALRLRELDIGRLPAGALRGLGQLKELEIHLWPSLEALDPGSLVGL---- 252
Query: 252 SLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGL 311
+L SL + ++ AL L+ L LDL I+ A L L+ L + G L
Sbjct: 253 NLSSLAITRCNLSSVPFQALYHLSFLRVLDLSQNPISAIPARRLSPLVRLQELRLSGACL 312
Query: 312 TDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRIT 361
T L++ LL+++ N T + S LV+L +S + +T
Sbjct: 313 TSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSP-DKLVTLRLSGNPLT 361
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 106/244 (43%), Gaps = 19/244 (7%)
Query: 152 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELS 211
S++ L+ L+L +N+++ GL +L +L L + G +GL L L+L
Sbjct: 81 SRLSLLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLSALTLLDLR 140
Query: 212 DTQV-----GSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDT 266
Q+ G+ G L L LE + ++ G+ AGL+ L +L L+ ++
Sbjct: 141 LNQIVLFLDGAFG--ELGSLQKLEVGDNHLVFVAPGAF---AGLAKLSTLTLERCNLSTV 195
Query: 267 GLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLT 326
AL L L L L I A LR L+ LEI +A D SL
Sbjct: 196 PGLALARLPALVALRLRELDIGRLPAGALRGLGQLKELEIHLWPSLEA-----LDPGSLV 250
Query: 327 LLNLSQ----NCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC 382
LNLS CNL+ + + L+ L L++S + I++ R L PL L+ L L
Sbjct: 251 GLNLSSLAITRCNLSSVPFQALYHLSFLRVLDLSQNPISAIPARRLSPLVRLQELRLSGA 310
Query: 383 KVTA 386
+T+
Sbjct: 311 CLTS 314
Score = 35.4 bits (80), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 75/195 (38%), Gaps = 27/195 (13%)
Query: 19 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 78
+N + AFAGL L L LERC L + GL
Sbjct: 165 DNHLVFVAPGAFAGLAKLSTLTLERCN-----LSTVPGLA-------------------- 199
Query: 79 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG-SLFYLN 137
L+ L L +L++ + L+GL +L L + P A LD S +G +L L
Sbjct: 200 LARLPALVALRLRELDIGRLPAGALRGLGQLKELEIHLWPSLEA-LDPGSLVGLNLSSLA 258
Query: 138 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 197
+ RC LS + + L+VL+L N I+ L L L+ L L +
Sbjct: 259 ITRCNLSSVPFQALYHLSFLRVLDLSQNPISAIPARRLSPLVRLQELRLSGACLTSIAAH 318
Query: 198 NLTGLCNLKCLELSD 212
GL L+++D
Sbjct: 319 AFHGLTAFHLLDVAD 333
>sp|Q5TJ59|TLR3_BOVIN Toll-like receptor 3 OS=Bos taurus GN=TLR3 PE=2 SV=1
Length = 904
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 139/335 (41%), Gaps = 47/335 (14%)
Query: 3 ENLSGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLES 62
++ + L +L LS NN I ++F GL NL +LDL R ++L L K++
Sbjct: 293 DSFAWLPHLEYLSLEYNN-IEHLSSRSFYGLSNLRRLDLRRSFTRQS--ISLTSLPKIDD 349
Query: 63 LNIKWCNCIT----DSDMKP------LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLL 112
+ +W C+ D + P +GL LK L +S S + L+ L T L
Sbjct: 350 FSFQWLKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSLSNSFSS------LRTLTNETFL 403
Query: 113 NLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 172
+L GCP L L+L + ++S FS +G L+VL+LG NEI E
Sbjct: 404 SLAGCP--------------LLLLDLTKNKISKIQSGAFSWLGHLEVLDLGLNEIGQELT 449
Query: 173 -VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL-----ELSDTQVGSSGLRHLSGL 226
+GL N+ + L + + T + +L+ L L + S R L L
Sbjct: 450 GQEWRGLDNIVEIYLSYNKYLELTTNSFTSVPSLQRLMLRRVALKNVDCSPSPFRPLPNL 509
Query: 227 TNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAA-----LTSLTGLTHLD 281
L+ N + I+D L+ GL L+ L+L + A + L GL HL
Sbjct: 510 VILDLSNNNIANINDELLK---GLEKLEILDLQHNNLARLWKHANPGGPVQFLKGLFHLH 566
Query: 282 LFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGV 316
+ + FK+LR L+ G+ + +
Sbjct: 567 ILNLGSNGFDEIPVEAFKDLRELKSIDLGMNNLNI 601
>sp|O75473|LGR5_HUMAN Leucine-rich repeat-containing G-protein coupled receptor 5 OS=Homo
sapiens GN=LGR5 PE=2 SV=1
Length = 907
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 136/321 (42%), Gaps = 19/321 (5%)
Query: 20 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 79
NA+T AF GL +L L L+ H L+ L L+SL + N I+
Sbjct: 100 NALTYIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQNLRSLQSLRLD-ANHISYVPPSCF 158
Query: 80 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 139
SGL +L+ L + + +T+ + + L L + L + + L SL L+L+
Sbjct: 159 SGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLH 218
Query: 140 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC---GIGDEGL 196
++ G + F + SL+ L+L +N + DE ++ L+NL+ L S I ++
Sbjct: 219 NNRIHSLGKKCFDGLHSLETLDLNYNNL-DEFPTAIRTLSNLKELGFHSNNIRSIPEKAF 277
Query: 197 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD-GSLRKLAGLSSLKS 255
V L + + VG S +HL L L+ G S L G ++L+S
Sbjct: 278 VGNPSLITIHFYDNPIQFVGRSAFQHLPELR-----TLTLNGASQITEFPDLTGTANLES 332
Query: 256 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF---KNLRSLEICGGGLT 312
L L QI+ L L LDL + D L +F + L+ +++ +
Sbjct: 333 LTLTGAQISSLPQTVCNQLPNLQVLDLSYNLLED-----LPSFSVCQKLQKIDLRHNEIY 387
Query: 313 DAGVKHIKDLSSLTLLNLSQN 333
+ V + L SL LNL+ N
Sbjct: 388 EIKVDTFQQLLSLRSLNLAWN 408
Score = 37.0 bits (84), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 67/174 (38%), Gaps = 24/174 (13%)
Query: 160 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG 219
L+L N I+ L L LE L L + TGL +LK L L + Q
Sbjct: 71 LDLSMNNISQLLPNPLPSLRFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQ----- 125
Query: 220 LRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTH 279
LRH+ L L SL+SL LDA I+ + + L L H
Sbjct: 126 LRHVPT-------------------EALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRH 166
Query: 280 LDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQN 333
L L +T+ R+ L+++ + + +LSSL +L+L N
Sbjct: 167 LWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNN 220
>sp|Q5UQA7|YR542_MIMIV Putative F-box/LRR-repeat protein R542 OS=Acanthamoeba polyphaga
mimivirus GN=MIMI_R542 PE=4 SV=1
Length = 558
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 150/364 (41%), Gaps = 80/364 (21%)
Query: 9 SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN---LKGLMKLESLNI 65
N S SF N +K + RC + +N LK L + SLNI
Sbjct: 42 QNPKSFSFNLKNCNPKDSIKYLQSV---------RCLNLSKSTINDDQLKYLSDVYSLNI 92
Query: 66 KWCNCITDSDMKPLSGLTNLKSLQISCS-KVTDSGIAYLKGLQKLTLLNLEGC-PVTAAC 123
C ITD + LS LT + L +S + +TD+G LK Q++ +NL C +T
Sbjct: 93 SNCKSITD---RGLSFLTQVVKLNVSYNGNITDNG---LKNFQRIKKINLCFCGKITDKG 146
Query: 124 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLK------ 176
+++L +L SD+ + I +++ +NL IT +CL HL+
Sbjct: 147 IENLVYGKTLN---------SDEPIP--TVINTIRKINLQCCMRITSKCLQHLRRARSIN 195
Query: 177 -------------GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 223
+ N+E+L +D + D+ L NL + + + HL
Sbjct: 196 MLYGPQTYNEDLQYIPNIETLKIDGLDVSDKNLTNLKYVKYI----FFGRNYPVIFMSHL 251
Query: 224 SGLTNL---------ESINLS---------FTGISDGSLRKLAGLSSLKSLNL-DARQIT 264
LT L E I+ + +G + +L GLS ++ LNL + IT
Sbjct: 252 DKLTKLILPNVPEHIEYIDFNKMPNLVKADLSGCINLLDEQLKGLSKVRKLNLKECYDIT 311
Query: 265 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG-GLTDAGVKHIKDLS 323
D GL+ LT + + F RITDSG YL N + ICG +T+ G ++K +
Sbjct: 312 DVGLSYLTMVKKINISYCF--RITDSGLKYL---SNADYVNICGCLKITNEGFFYLKKVP 366
Query: 324 SLTL 327
L +
Sbjct: 367 KLVV 370
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 138/307 (44%), Gaps = 60/307 (19%)
Query: 30 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 89
F + NLVK DL C + LKGL K+ LN+K C ITD LS LT +K +
Sbjct: 271 FNKMPNLVKADLSGCINLLDE--QLKGLSKVRKLNLKECYDITDVG---LSYLTMVKKIN 325
Query: 90 IS-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFY----LNLNRCQL 143
IS C ++TDSG+ YL +N+ GC +T L + L L+L C +
Sbjct: 326 ISYCFRITDSGLKYLSNAD---YVNICGCLKITNEGFFYLKKVPKLVVGYTTLSLYDCMI 382
Query: 144 SDDGCEKFSKI---GSLKVLNLG----FNEITDECL---------VHLKGLTNLESL--- 184
DGC + + + K L G + E T + V LK TNL +L
Sbjct: 383 --DGCGDYEYLTISDNTKQLITGKAFHYLENTSQIKIINCNNIIDVDLKSFTNLPTLSKI 440
Query: 185 NLDSC-GIGDEGLVNLTGLCNLKCLELSDT-QVGSSGLRHLSGLTNLESINLSFTGISDG 242
+L C I ++G L+ LCN+ +++S+ Q+ S G +S LTN + I++ S
Sbjct: 441 DLRYCNNITNQG---LSALCNIPIVKISNNYQISSKG---ISYLTNSKKISIE----SCP 490
Query: 243 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF---K 299
+ L+ LK L + + + + +L H+ D+ Y R+F +
Sbjct: 491 KINSFPNLTGLKKLVF--KTMGKINMQLIQNLNEYYHI--------DTIHVYYRDFIDRQ 540
Query: 300 NLRSLEI 306
+L S++I
Sbjct: 541 HLSSIKI 547
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 125/298 (41%), Gaps = 69/298 (23%)
Query: 125 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV-------------------LNLGFN 165
DS+ L S+ LNL++ ++DD + S + SL + LN+ +N
Sbjct: 58 DSIKYLQSVRCLNLSKSTINDDQLKYLSDVYSLNISNCKSITDRGLSFLTQVVKLNVSYN 117
Query: 166 -EITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTG------------------LCNL 205
ITD LK ++ +NL CG I D+G+ NL NL
Sbjct: 118 GNITDN---GLKNFQRIKKINLCFCGKITDKGIENLVYGKTLNSDEPIPTVINTIRKINL 174
Query: 206 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 265
+C ++ S L+HL SIN+ + + L + ++++L +D ++D
Sbjct: 175 QCC----MRITSKCLQHLR---RARSINMLYGPQTYN--EDLQYIPNIETLKIDGLDVSD 225
Query: 266 TGLAAL-----------TSLTGLTHLDLFGARITDSGAAYLR--NFKNLRSLEICG-GGL 311
L L + ++HLD I + ++ +F + +L G
Sbjct: 226 KNLTNLKYVKYIFFGRNYPVIFMSHLDKLTKLILPNVPEHIEYIDFNKMPNLVKADLSGC 285
Query: 312 TDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNS-RITSAGLRHL 368
+ + +K LS + LNL + ++TD L S LT + +N+S RIT +GL++L
Sbjct: 286 INLLDEQLKGLSKVRKLNLKECYDITDVGL---SYLTMVKKINISYCFRITDSGLKYL 340
>sp|P35858|ALS_HUMAN Insulin-like growth factor-binding protein complex acid labile
subunit OS=Homo sapiens GN=IGFALS PE=1 SV=1
Length = 605
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 159/404 (39%), Gaps = 31/404 (7%)
Query: 2 TENLSGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMK 59
+ L GL NL L RN + + + FA L L L R +R+ GL +GL
Sbjct: 115 PQALLGLENLCHLHLERNQ-LRSLALGTFAHTPALASLGLSNNRLSRLEDGL--FEGLGS 171
Query: 60 LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPV 119
L LN+ W + D GL +L+ L ++ +++ A GL +L L+L +
Sbjct: 172 LWDLNLGWNSLAVLPDAA-FRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNAL 230
Query: 120 TAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEI------------ 167
A + L L L L+R ++ F + +L+ L+L N +
Sbjct: 231 RAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLL 290
Query: 168 -------TDECLVHL-----KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQV 215
+ + L K L LE L L I + GL L+ L L Q+
Sbjct: 291 GLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQL 350
Query: 216 GSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLT 275
GLTN+ +NLS + + + GL L SL+L+ + T L+
Sbjct: 351 QEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLS 410
Query: 276 GLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCN 335
GL L L + L L L++ LT + + L L L LS+N
Sbjct: 411 GLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRN-R 469
Query: 336 LTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 379
L + + + L L+VS++R+ + L PL LR L+L
Sbjct: 470 LAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSL 513
>sp|Q9FL28|FLS2_ARATH LRR receptor-like serine/threonine-protein kinase FLS2
OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1
Length = 1173
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 1/300 (0%)
Query: 79 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 138
++ LT L+ L ++ + T A + L +L L L + + + L ++FYL+L
Sbjct: 92 IANLTYLQVLDLTSNSFTGKIPAEIGKLTELNQLILYLNYFSGSIPSGIWELKNIFYLDL 151
Query: 139 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 198
LS D E+ K SL ++ +N +T + L L +L+ + V+
Sbjct: 152 RNNLLSGDVPEEICKTSSLVLIGFDYNNLTGKIPECLGDLVHLQMFVAAGNHLTGSIPVS 211
Query: 199 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 258
+ L NL L+LS Q+ R L NL+S+ L+ + ++ SSL L L
Sbjct: 212 IGTLANLTDLDLSGNQLTGKIPRDFGNLLNLQSLVLTENLLEGDIPAEIGNCSSLVQLEL 271
Query: 259 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKH 318
Q+T A L +L L L ++ ++T S + L L L + L +
Sbjct: 272 YDNQLTGKIPAELGNLVQLQALRIYKNKLTSSIPSSLFRLTQLTHLGLSENHLVGPISEE 331
Query: 319 IKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 378
I L SL +L L N N T + + I+ L L L V + I+ L L NLR+L+
Sbjct: 332 IGFLESLEVLTLHSN-NFTGEFPQSITNLRNLTVLTVGFNNISGELPADLGLLTNLRNLS 390
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 175/402 (43%), Gaps = 24/402 (5%)
Query: 8 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT---RIHGGLVNLKGLMKLESLN 64
L+NLT L N +T + + F L+NL L L I + N L++LE
Sbjct: 215 LANLTDLDLS-GNQLTGKIPRDFGNLLNLQSLVLTENLLEGDIPAEIGNCSSLVQLE--- 270
Query: 65 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACL 124
+ N +T L L L++L+I +K+T S + L L +LT L L +
Sbjct: 271 -LYDNQLTGKIPAELGNLVQLQALRIYKNKLTSSIPSSLFRLTQLTHLGLSENHLVGPIS 329
Query: 125 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 184
+ + L SL L L+ + + + + + +L VL +GFN I+ E L LTNL +L
Sbjct: 330 EEIGFLESLEVLTLHSNNFTGEFPQSITNLRNLTVLTVGFNNISGELPADLGLLTNLRNL 389
Query: 185 NLDS---CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL---SFTG 238
+ G + N TG LK L+LS Q+ R G NL I++ FTG
Sbjct: 390 SAHDNLLTGPIPSSISNCTG---LKLLDLSHNQMTGEIPRGF-GRMNLTFISIGRNHFTG 445
Query: 239 -ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 297
I D + S+L++L++ +T T + L L L + +T + N
Sbjct: 446 EIPD----DIFNCSNLETLSVADNNLTGTLKPLIGKLQKLRILQVSYNSLTGPIPREIGN 501
Query: 298 FKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSN 357
K+L L + G T + + +L+ L L + N +L E + + L L++SN
Sbjct: 502 LKDLNILYLHSNGFTGRIPREMSNLTLLQGLRMYSN-DLEGPIPEEMFDMKLLSVLDLSN 560
Query: 358 SRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPN 399
++ + L++L L+L+ K + L+S L N
Sbjct: 561 NKFSGQIPALFSKLESLTYLSLQGNKFNGSIPASLKSLSLLN 602
>sp|A2RT62|FXL16_MOUSE F-box/LRR-repeat protein 16 OS=Mus musculus GN=Fbxl16 PE=2 SV=1
Length = 479
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 128/264 (48%), Gaps = 23/264 (8%)
Query: 137 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL-VHLKGLTNLESLNLDSC------ 189
+L+ C+ D+ SK G +K ++L + ITD L V L+ + + L L C
Sbjct: 178 DLDICEFIDN--YSLSKKG-VKAMSLKRSTITDAGLEVMLEQMQGVVRLELSGCNDFTEA 234
Query: 190 GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA- 248
G+ +T L C+ ++D + + + L L NL ++L ++D +L
Sbjct: 235 GLWSSLSARITSLSVSDCINVADDAIAA--ISQL--LPNLAELSLQAYHVTDTALAYFTA 290
Query: 249 --GLSSLKSLNLDARQITDTGLA-ALTSLTGLTHLDLFG-ARITDSGAAYL-RNFKNLRS 303
G S+ L +IT+ G+ + SL LT L L G +++TD G + N + LRS
Sbjct: 291 RQGHSTHTLRLLSCWEITNHGVVNVVHSLPNLTSLSLSGCSKVTDDGVELVAENLRKLRS 350
Query: 304 LEICG-GGLTDAGVKHIK-DLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNS-RI 360
L++ +TD ++++ DL L L L + +TD L +S ++ L SL + ++
Sbjct: 351 LDLSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQV 410
Query: 361 TSAGLRHLKPLKNLRSLTLESCKV 384
GL+HL ++NLR L+L C +
Sbjct: 411 QDFGLKHLLAMRNLRLLSLAGCPL 434
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 27/258 (10%)
Query: 5 LSGLSNLTSLSFRRNNAITAQGMKAF---------AGL-------INLVKLDLERCTRIH 48
L G+S+L F N +++ +G+KA AGL +V+L+L C
Sbjct: 173 LVGVSDLDICEFIDNYSLSKKGVKAMSLKRSTITDAGLEVMLEQMQGVVRLELSGCNDFT 232
Query: 49 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGL-TNLKSLQISCSKVTDSGIAYL---K 104
+ ++ SL++ C + D + +S L NL L + VTD+ +AY +
Sbjct: 233 EAGLWSSLSARITSLSVSDCINVADDAIAAISQLLPNLAELSLQAYHVTDTALAYFTARQ 292
Query: 105 GLQKLTLLNLEGCPVT-AACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLN 161
G TL L +T ++ + +L +L L+L+ C +++DDG E ++ + L+ L+
Sbjct: 293 GHSTHTLRLLSCWEITNHGVVNVVHSLPNLTSLSLSGCSKVTDDGVELVAENLRKLRSLD 352
Query: 162 LGF-NEITDECLVHLK-GLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGS 217
L + ITD L ++ L LE L LD C I D GL L+ + +L+ L L QV
Sbjct: 353 LSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQVQD 412
Query: 218 SGLRHLSGLTNLESINLS 235
GL+HL + NL ++L+
Sbjct: 413 FGLKHLLAMRNLRLLSLA 430
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 123/251 (49%), Gaps = 25/251 (9%)
Query: 147 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV----NLTGL 202
G E F +G V +L E D + KG+ ++++L I D GL + G+
Sbjct: 167 GFEGFCLVG---VSDLDICEFIDNYSLSKKGV---KAMSLKRSTITDAGLEVMLEQMQGV 220
Query: 203 CNLK---CLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 259
L+ C + ++ + SS ++ L+ + IN++ I+ ++ +L L +L L+L
Sbjct: 221 VRLELSGCNDFTEAGLWSSLSARITSLSVSDCINVADDAIA--AISQL--LPNLAELSLQ 276
Query: 260 ARQITDTGLAALTSLTGL-TH-LDLFGA-RITDSGAA-YLRNFKNLRSLEICG-GGLTDA 314
A +TDT LA T+ G TH L L IT+ G + + NL SL + G +TD
Sbjct: 277 AYHVTDTALAYFTARQGHSTHTLRLLSCWEITNHGVVNVVHSLPNLTSLSLSGCSKVTDD 336
Query: 315 GVKHI-KDLSSLTLLNLSQNCNLTDKTLELIS-GLTGLVSLNVSNS-RITSAGLRHLKPL 371
GV+ + ++L L L+LS +TD LE ++ L L L + RIT GL +L +
Sbjct: 337 GVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGLSYLSTM 396
Query: 372 KNLRSLTLESC 382
+LRSL L C
Sbjct: 397 SSLRSLYLRWC 407
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 33 LINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQ 89
L NL L L C+++ V L + L KL SL++ WC ITD ++ ++ L L+ L
Sbjct: 319 LPNLTSLSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEELV 378
Query: 90 IS-CSKVTDSGIAYLKGLQKLTLLNLEG-CPVTAACLDSLSALGSLFYLNLNRCQL 143
+ C ++TD+G++YL + L L L C V L L A+ +L L+L C L
Sbjct: 379 LDRCVRITDTGLSYLSTMSSLRSLYLRWCCQVQDFGLKHLLAMRNLRLLSLAGCPL 434
Score = 39.7 bits (91), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 8 LSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNI 65
L L SL IT ++ A L L +L L+RC RI GL L + L SL +
Sbjct: 345 LRKLRSLDLSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGLSYLSTMSSLRSLYL 404
Query: 66 KWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACL 124
+WC + D +K L + NL+ L ++ C +T +G++ L LQ+L L L CP
Sbjct: 405 RWCCQVQDFGLKHLLAMRNLRLLSLAGCPLLTTTGLSGLVQLQELEELELTNCP------ 458
Query: 125 DSLSALGSLFYLNLNRC 141
+ L F +L RC
Sbjct: 459 GATPELFKYFSQHLPRC 475
>sp|Q3URE9|LIGO2_MOUSE Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 2 OS=Mus musculus GN=Lingo2
PE=2 SV=1
Length = 606
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 80/191 (41%), Gaps = 16/191 (8%)
Query: 151 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC---GIGDEGLVNLTGLCNLKC 207
F + +LK L +G N++ GL +LE L L+ C + E L +L L L
Sbjct: 149 FQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLIALHL 208
Query: 208 LELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTG 267
L+ + + L L NLE I L L +SL LNL + IT+T
Sbjct: 209 KHLNINNMPVYAFKRLFHLKNLE--------IDYWPLLDLMPANSLYGLNLTSLSITNTN 260
Query: 268 LA-----ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDL 322
L+ A L LTHL+L I+ A + L+ L I G L + L
Sbjct: 261 LSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGL 320
Query: 323 SSLTLLNLSQN 333
L +LN+SQN
Sbjct: 321 RFLRVLNVSQN 331
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 1/175 (0%)
Query: 206 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 265
K L+LS ++ S LE I+LS I++ L +L+SL L ++
Sbjct: 60 KILDLSKNRLKSINPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKL 119
Query: 266 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSL 325
L T L+ LT LD+ +I ++ NL+SLE+ L + L SL
Sbjct: 120 VPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSL 179
Query: 326 TLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 380
L L + CNLT E +S L L++L++ + I + + K L +L++L ++
Sbjct: 180 EQLTL-EKCNLTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKRLFHLKNLEID 233
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 115/279 (41%), Gaps = 17/279 (6%)
Query: 115 EGCPVTAACLD-------SLSALGSLFYLNLNRCQLSDDGCE-----KFSKIGSLKVLNL 162
EG P+ LD S++ + Y L LSD+ F+ + +L+ L L
Sbjct: 53 EGIPIETKILDLSKNRLKSINPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRL 112
Query: 163 GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 222
N + L GL+NL L++ I L NLK LE+ D + R
Sbjct: 113 KGNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRA 172
Query: 223 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 282
SGL +LE + L ++ L+ L SL +L+L I + + A L L +L++
Sbjct: 173 FSGLLSLEQLTLEKCNLTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKRLFHLKNLEI 232
Query: 283 FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLE 342
+ D A NL SL I L+ K L LT LNLS N T+E
Sbjct: 233 DYWPLLDLMPANSLYGLNLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYN---PISTIE 289
Query: 343 --LISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 379
+ S L L L++ +++ + + L+ LR L +
Sbjct: 290 AGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNV 328
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 7/243 (2%)
Query: 19 NNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 76
+N I AF L NL L L+ R + G+ GL L L+I + D
Sbjct: 90 DNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGV--FTGLSNLTKLDISENKIVILLDY 147
Query: 77 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 136
L NLKSL++ + + GL L L LE C +TA ++LS L SL L
Sbjct: 148 M-FQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLIAL 206
Query: 137 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH-LKGLTNLESLNLDSCGIGDEG 195
+L +++ F ++ LK L + + + D + L GL NL SL++ + +
Sbjct: 207 HLKHLNINNMPVYAFKRLFHLKNLEIDYWPLLDLMPANSLYGL-NLTSLSITNTNLSTVP 265
Query: 196 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 255
+ L L L LS + + S L L+ +++ + GL L+
Sbjct: 266 FLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLRV 325
Query: 256 LNL 258
LN+
Sbjct: 326 LNV 328
Score = 39.3 bits (90), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 6/163 (3%)
Query: 5 LSGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLN 64
SGL +L L+ + N +TA +A + L +L+ L L+ + + K L L++L
Sbjct: 173 FSGLLSLEQLTLEKCN-LTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKRLFHLKNLE 231
Query: 65 IKWCNCITDSDMKPLSGLT--NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 122
I + + D+ P + L NL SL I+ + ++ K L LT LNL P++
Sbjct: 232 IDYWPLL---DLMPANSLYGLNLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTI 288
Query: 123 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN 165
S L L L++ QL F + L+VLN+ N
Sbjct: 289 EAGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQN 331
Score = 36.6 bits (83), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 5/135 (3%)
Query: 254 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 313
K L+L ++ S L +DL I + N NLRSL + G L
Sbjct: 60 KILDLSKNRLKSINPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKL 119
Query: 314 AGVKHIKDLSSLTLLNLSQN--CNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPL 371
+ LS+LT L++S+N L D + L L SL V ++ + R L
Sbjct: 120 VPLGVFTGLSNLTKLDISENKIVILLDY---MFQDLHNLKSLEVGDNDLVYISHRAFSGL 176
Query: 372 KNLRSLTLESCKVTA 386
+L LTLE C +TA
Sbjct: 177 LSLEQLTLEKCNLTA 191
>sp|Q9Z1P4|LGR5_MOUSE Leucine-rich repeat-containing G-protein coupled receptor 5 OS=Mus
musculus GN=Lgr5 PE=2 SV=2
Length = 907
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 136/318 (42%), Gaps = 7/318 (2%)
Query: 69 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 128
N +T +GL +LK L + +++ L+ L+ L L L+ ++ S
Sbjct: 100 NALTHIPKGAFTGLHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHISYVPPSCFS 159
Query: 129 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 188
L SL +L L+ L+D + F + +L+ + L N+I L++L L+L +
Sbjct: 160 GLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADYAFGNLSSLVVLHLHN 219
Query: 189 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 248
I G GL +L+ L+L+ + + L+NL+ + I R
Sbjct: 220 NRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTA-IKTLSNLKELGFHSNNIRSIPERAFV 278
Query: 249 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEIC 307
G SL +++ I G++A L L L L GA IT+ +L L SL +
Sbjct: 279 GNPSLITIHFYDNPIQFVGVSAFQHLPELRTLTLNGASHITE--FPHLTGTATLESLTLT 336
Query: 308 GGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRH 367
G ++ L +L +L+LS N L D L +SG L +++ ++ I
Sbjct: 337 GAKISSLPQAVCDQLPNLQVLDLSYNL-LED--LPSLSGCQKLQKIDLRHNEIYEIKGST 393
Query: 368 LKPLKNLRSLTLESCKVT 385
+ L NLRSL L K+
Sbjct: 394 FQQLFNLRSLNLAWNKIA 411
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 153/378 (40%), Gaps = 36/378 (9%)
Query: 20 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 79
NA+T AF GL +L L L+ L+ L L+SL + N I+
Sbjct: 100 NALTHIPKGAFTGLHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLD-ANHISYVPPSCF 158
Query: 80 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 139
SGL +L+ L + + +TD + + L L + L + + L SL L+L+
Sbjct: 159 SGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADYAFGNLSSLVVLHLH 218
Query: 140 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC---GIGDEGL 196
++ G + F + SL+ L+L +N + DE +K L+NL+ L S I +
Sbjct: 219 NNRIHSLGKKCFDGLHSLETLDLNYNNL-DEFPTAIKTLSNLKELGFHSNNIRSIPERAF 277
Query: 197 VNLTGLCNLKCLELSDTQVGSSGLRHL--------------------SGLTNLESINLSF 236
V L + + VG S +HL +G LES+ L+
Sbjct: 278 VGNPSLITIHFYDNPIQFVGVSAFQHLPELRTLTLNGASHITEFPHLTGTATLESLTLTG 337
Query: 237 TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 296
IS L +L+ L+L + D L +L+ L +DL I + + +
Sbjct: 338 AKISSLPQAVCDQLPNLQVLDLSYNLLED--LPSLSGCQKLQKIDLRHNEIYEIKGSTFQ 395
Query: 297 NFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVS 356
NLRSL + + + H S+L L + + + + ++GL GL L ++
Sbjct: 396 QLFNLRSLNLAWNKI---AIIHPNAFSTLPSL-IKLDLSSNLLSSFPVTGLHGLTHLKLT 451
Query: 357 NSR-----ITSAGLRHLK 369
+R I SA LK
Sbjct: 452 GNRALQSLIPSANFPELK 469
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 99/243 (40%), Gaps = 24/243 (9%)
Query: 160 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG 219
L+L N I+ L L LE L L + TGL +LK L L + Q+
Sbjct: 71 LDLSMNNISQLPASLLHRLCFLEELRLAGNALTHIPKGAFTGLHSLKVLMLQNNQLRQVP 130
Query: 220 LRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTH 279
L L +L+S+ L IS +GL SL+ L LD +TD + A SL+ L
Sbjct: 131 EEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQA 190
Query: 280 LDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTD- 338
+ L +I N +L L + + G K L SL L+L+ N NL +
Sbjct: 191 MTLALNKIHHIADYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYN-NLDEF 249
Query: 339 ----KTL----EL--------------ISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRS 376
KTL EL G L++++ ++ I G+ + L LR+
Sbjct: 250 PTAIKTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQFVGVSAFQHLPELRT 309
Query: 377 LTL 379
LTL
Sbjct: 310 LTL 312
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 120/333 (36%), Gaps = 65/333 (19%)
Query: 7 GLSNLTSLSFRRNNAITAQGMK----------AFAGLINLVKLDLERCTRIHG-GLVNLK 55
L+++ +FR +A+ A + AF L +LV L L RIH G
Sbjct: 173 ALTDVPVQAFRSLSALQAMTLALNKIHHIADYAFGNLSSLVVLHLHN-NRIHSLGKKCFD 231
Query: 56 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 115
GL LE+L++ + N D + L+NLK L + + G L ++
Sbjct: 232 GLHSLETLDLNYNN--LDEFPTAIKTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHFY 289
Query: 116 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL-GFNEITDECLVH 174
P+ G F + L+ L L G + IT+ H
Sbjct: 290 DNPIQFV------------------------GVSAFQHLPELRTLTLNGASHITE--FPH 323
Query: 175 LKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 234
L G LESL L I L NL+ L+LS + L LSG L+ I+L
Sbjct: 324 LTGTATLESLTLTGAKISSLPQAVCDQLPNLQVLDLSYNLL--EDLPSLSGCQKLQKIDL 381
Query: 235 SFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL---------------------TS 273
I + L +L+SLNL +I A T
Sbjct: 382 RHNEIYEIKGSTFQQLFNLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPVTG 441
Query: 274 LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 306
L GLTHL L G R S NF L+ +E+
Sbjct: 442 LHGLTHLKLTGNRALQSLIPS-ANFPELKIIEM 473
>sp|Q9UKC9|FBXL2_HUMAN F-box/LRR-repeat protein 2 OS=Homo sapiens GN=FBXL2 PE=1 SV=3
Length = 423
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 137/298 (45%), Gaps = 57/298 (19%)
Query: 60 LESLNIKWCNCITDSDMKPLSGL-TNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC 117
+E LN+ C ITDS LS + LK L + SC +T+S LKG+ EGC
Sbjct: 106 IEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSS---LKGIS-------EGC 155
Query: 118 PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLNL-GFNEITDECLVH 174
+L YLNL+ C Q++ DG E + LK L L G ++ DE L H
Sbjct: 156 R-------------NLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKH 202
Query: 175 LKGLTN-LESLNLDSCG-IGDEGLVN-------LTGLCNLKCLELSDTQVGSSGLRHLSG 225
++ + L SLNL SC I DEG+V L LC C L+D + + GL +
Sbjct: 203 IQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGL-NCPR 261
Query: 226 LTNLESINLSFTGISDGSLRKLA-GLSSLKSLNL-DARQITDTGLAALT------SLTGL 277
L LE+ S ++D LA L+ ++L + ITD+ L L+ L
Sbjct: 262 LQILEAARCSH--LTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSL 319
Query: 278 THLDLFGARITDSGAAYLRN----FKNLRSLEICGGGL-TDAGVKHIKDLSSLTLLNL 330
+H +L ITD G +L N + LR LE+ L TD ++H+++ L L L
Sbjct: 320 SHCEL----ITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLEL 373
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 164/379 (43%), Gaps = 89/379 (23%)
Query: 60 LESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEG 116
L L+++ C + DS +K + N++ L ++ C+K+TDS L + KL L+L
Sbjct: 80 LRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTS 139
Query: 117 C-PVTAACLDSLS-ALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLNL-GFNEITDEC 171
C +T + L +S +L YLNL+ C Q++ DG E + LK L L G ++ DE
Sbjct: 140 CVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEA 199
Query: 172 LVHLKGLTN-LESLNLDSCG-IGDEGLVN-------LTGLCNLKCLELSDTQVGSSGLRH 222
L H++ + L SLNL SC I DEG+V L LC C L+D + + GL +
Sbjct: 200 LKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGL-N 258
Query: 223 LSGLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNLD-ARQITDTGLAALT------SL 274
L LE+ S ++D LA L+ ++L+ ITD+ L L+
Sbjct: 259 CPRLQILEAARCSH--LTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQA 316
Query: 275 TGLTHLDLFGARITDSGAAYLRN----FKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNL 330
L+H +L ITD G +L N + LR LE+
Sbjct: 317 LSLSHCEL----ITDDGILHLSNSTCGHERLRVLEL------------------------ 348
Query: 331 SQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC-KVTANDI 389
NC L IT L HL+ + L L L C +VT I
Sbjct: 349 -DNCLL-----------------------ITDVALEHLENCRGLERLELYDCQQVTRAGI 384
Query: 390 KRLQSRDLPNL---VSFRP 405
KR++++ LP++ F P
Sbjct: 385 KRMRAQ-LPHVKVHAYFAP 402
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 127/302 (42%), Gaps = 68/302 (22%)
Query: 36 LVKLDLERCTRIHGGLVNLKGLMK----LESLNIKWCNCITDSDMKPL-SGLTNLKSLQI 90
L LDL C I +LKG+ + LE LN+ WC+ IT ++ L G LK+L +
Sbjct: 132 LKHLDLTSCVSITNS--SLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLL 189
Query: 91 ---------------------------SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTA 121
SCS++TD G+ + +G +L L L GC +T
Sbjct: 190 RGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTD 249
Query: 122 ACLDSLSALGSLFYLNLNRCQLSDDG-CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 180
A SL+ALG LN R Q+ + C + + GF + C
Sbjct: 250 A---SLTALG----LNCPRLQILEAARCSHLT--------DAGFTLLARNC-------HE 287
Query: 181 LESLNLDSCG-IGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHLS----GLTNLESIN 233
LE ++L+ C I D L+ L+ C L+ L LS + + G+ HLS G L +
Sbjct: 288 LEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGHERLRVLE 347
Query: 234 L-SFTGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSG 291
L + I+D +L L L+ L L D +Q+T G+ + + + + A +T
Sbjct: 348 LDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYFAPVTPPT 407
Query: 292 AA 293
A
Sbjct: 408 AV 409
>sp|Q5R3Z8|FBXL2_PONAB F-box/LRR-repeat protein 2 OS=Pongo abelii GN=FBXL2 PE=2 SV=1
Length = 423
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 137/298 (45%), Gaps = 57/298 (19%)
Query: 60 LESLNIKWCNCITDSDMKPLSGL-TNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC 117
+E LN+ C ITDS LS + LK L + SC +T+S LKG+ EGC
Sbjct: 106 IEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSS---LKGIS-------EGC 155
Query: 118 PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLNL-GFNEITDECLVH 174
+L YLNL+ C Q++ DG E + LK L L G ++ DE L H
Sbjct: 156 R-------------NLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKH 202
Query: 175 LKGLTN-LESLNLDSCG-IGDEGLVN-------LTGLCNLKCLELSDTQVGSSGLRHLSG 225
++ + L SLNL SC I DEG+V L LC C L+D + + GL +
Sbjct: 203 IQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGL-NCPR 261
Query: 226 LTNLESINLSFTGISDGSLRKLA-GLSSLKSLNL-DARQITDTGLAALT------SLTGL 277
L LE+ S ++D LA L+ ++L + ITD+ L L+ L
Sbjct: 262 LQILEAARCSH--LTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSL 319
Query: 278 THLDLFGARITDSGAAYLRN----FKNLRSLEICGGGL-TDAGVKHIKDLSSLTLLNL 330
+H +L ITD G +L N + LR LE+ L TD ++H+++ L L L
Sbjct: 320 SHCEL----ITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLEL 373
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 164/379 (43%), Gaps = 89/379 (23%)
Query: 60 LESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEG 116
L L+++ C + DS +K + N++ L ++ C+K+TDS L + KL L+L
Sbjct: 80 LRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTS 139
Query: 117 C-PVTAACLDSLS-ALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLNL-GFNEITDEC 171
C +T + L +S +L YLNL+ C Q++ DG E + LK L L G ++ DE
Sbjct: 140 CVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEA 199
Query: 172 LVHLKGLTN-LESLNLDSCG-IGDEGLVN-------LTGLCNLKCLELSDTQVGSSGLRH 222
L H++ + L SLNL SC I DEG+V L LC C L+D + + GL +
Sbjct: 200 LKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGL-N 258
Query: 223 LSGLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNLD-ARQITDTGLAALT------SL 274
L LE+ S ++D LA L+ ++L+ ITD+ L L+
Sbjct: 259 CPRLQILEAARCSH--LTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQA 316
Query: 275 TGLTHLDLFGARITDSGAAYLRN----FKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNL 330
L+H +L ITD G +L N + LR LE+
Sbjct: 317 LSLSHCEL----ITDDGILHLSNSTCGHERLRVLEL------------------------ 348
Query: 331 SQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC-KVTANDI 389
NC L IT L HL+ + L L L C +VT I
Sbjct: 349 -DNCLL-----------------------ITDVALEHLENCRGLERLELYDCQQVTRAGI 384
Query: 390 KRLQSRDLPNL---VSFRP 405
KR++++ LP++ F P
Sbjct: 385 KRMRAQ-LPHVKVHAYFAP 402
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 127/302 (42%), Gaps = 68/302 (22%)
Query: 36 LVKLDLERCTRIHGGLVNLKGLMK----LESLNIKWCNCITDSDMKPL-SGLTNLKSLQI 90
L LDL C I +LKG+ + LE LN+ WC+ IT ++ L G LK+L +
Sbjct: 132 LKHLDLTSCVSITNS--SLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLL 189
Query: 91 ---------------------------SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTA 121
SCS++TD G+ + +G +L L L GC +T
Sbjct: 190 RGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTD 249
Query: 122 ACLDSLSALGSLFYLNLNRCQLSDDG-CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 180
A SL+ALG LN R Q+ + C + + GF + C
Sbjct: 250 A---SLTALG----LNCPRLQILEAARCSHLT--------DAGFTLLARNC-------HE 287
Query: 181 LESLNLDSCG-IGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHLS----GLTNLESIN 233
LE ++L+ C I D L+ L+ C L+ L LS + + G+ HLS G L +
Sbjct: 288 LEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGHERLRVLE 347
Query: 234 L-SFTGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSG 291
L + I+D +L L L+ L L D +Q+T G+ + + + + A +T
Sbjct: 348 LDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYFAPVTPPT 407
Query: 292 AA 293
A
Sbjct: 408 AV 409
>sp|Q9D1T0|LIGO1_MOUSE Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Mus musculus GN=Lingo1
PE=1 SV=1
Length = 614
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 112/269 (41%), Gaps = 13/269 (4%)
Query: 20 NAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 77
N ++A AF L NL L L R I G+ GL L L+I + D
Sbjct: 99 NIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGV--FTGLSNLTKLDISENKIVILLDYM 156
Query: 78 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 137
L NLKSL++ + + GL L L LE C +T+ ++LS L L L
Sbjct: 157 -FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLR 215
Query: 138 LNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNLESLNLDSCGIGD 193
L ++ F ++ LKVL + + +T CL L NL SL++ C +
Sbjct: 216 LRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL----NLTSLSITHCNLTA 271
Query: 194 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 253
+ + L L+ L LS +G+ L L L+ I L ++ GL+ L
Sbjct: 272 VPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYL 331
Query: 254 KSLNLDARQITDTGLAALTSLTGLTHLDL 282
+ LN+ Q+T +A S+ L L L
Sbjct: 332 RVLNVSGNQLTTLEESAFHSVGNLETLIL 360
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 1/174 (0%)
Query: 206 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 265
+ L+L ++ + + +LE + L+ +S L +L++L L + ++
Sbjct: 68 RLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL 127
Query: 266 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSL 325
L T L+ LT LD+ +I ++ NL+SLE+ L + L+SL
Sbjct: 128 IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSL 187
Query: 326 TLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 379
L L + CNLT E +S L GL+ L + + I + K L L+ L +
Sbjct: 188 EQLTL-EKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEI 240
Score = 40.8 bits (94), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 6/186 (3%)
Query: 151 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC---GIGDEGLVNLTGLCNLKC 207
F + +LK L +G N++ GL +LE L L+ C I E L +L GL L+
Sbjct: 157 FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRL 216
Query: 208 LELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTG 267
L+ + + L L LE + + + + L GL+ L SL++ +T
Sbjct: 217 RHLNINAIRDYSFKRLYRLKVLEISHWPY--LDTMTPNCLYGLN-LTSLSITHCNLTAVP 273
Query: 268 LAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTL 327
A+ L L L+L I + L L+ +++ GG L + L+ L +
Sbjct: 274 YLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRV 333
Query: 328 LNLSQN 333
LN+S N
Sbjct: 334 LNVSGN 339
>sp|O15455|TLR3_HUMAN Toll-like receptor 3 OS=Homo sapiens GN=TLR3 PE=1 SV=1
Length = 904
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 151/380 (39%), Gaps = 57/380 (15%)
Query: 16 FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSD 75
F N I + GL N+ L+L+R ++L L K++ + +W C+ +
Sbjct: 304 FLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQS--ISLASLPKIDDFSFQWLKCLEHLN 361
Query: 76 MK----P------LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 125
M+ P +GL NLK L +S S + L+ L T ++L P
Sbjct: 362 MEDNDIPGIKSNMFTGLINLKYLSLSNSFTS------LRTLTNETFVSLAHSP------- 408
Query: 126 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL-VHLKGLTNLESL 184
L LNL + ++S + FS +G L+VL+LG NEI E +GL N+ +
Sbjct: 409 -------LHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEI 461
Query: 185 NL---DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 241
L + + L L ++ V SS L NL ++LS I++
Sbjct: 462 YLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSP-SPFQPLRNLTILDLSNNNIAN 520
Query: 242 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY-LRNFKN 300
+ L GL L+ L+L LA L G Y L+ +
Sbjct: 521 INDDMLEGLEKLEILDLQ-----HNNLARL------------WKHANPGGPIYFLKGLSH 563
Query: 301 LRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRI 360
L L + G + V+ KDL L +++L N NL + + L SLN+ + I
Sbjct: 564 LHILNLESNGFDEIPVEVFKDLFELKIIDLGLN-NLNTLPASVFNNQVSLKSLNLQKNLI 622
Query: 361 TSAGLRHLKP-LKNLRSLTL 379
TS + P +NL L +
Sbjct: 623 TSVEKKVFGPAFRNLTELDM 642
>sp|Q8NEE6|FXL13_HUMAN F-box/LRR-repeat protein 13 OS=Homo sapiens GN=FBXL13 PE=2 SV=3
Length = 735
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 142/355 (40%), Gaps = 73/355 (20%)
Query: 34 INLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS------------- 80
+N+++L+ C ++ L+ LN+ C TD M+ +S
Sbjct: 221 LNVLRLNFRGCLLRPKTFRSVSHCRNLQELNVSDCPTFTDESMRHISEGCPGVLCLNLSN 280
Query: 81 -------------GLTNLKSLQIS-CSKVTDSGIAYL---KGLQKLTLLNLEGCPVTAAC 123
NL++L ++ C + TD G+ YL G KL L+L GC T
Sbjct: 281 TTITNRTMRLLPRHFHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGC--TQIS 338
Query: 124 LDSLSALGS----LFYLNLNRCQLSDDGC-----EKFSKIGSL----------------- 157
+ + + + +L +N D C EK S+I SL
Sbjct: 339 VQGFRYIANSCTGIMHLTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALS 398
Query: 158 -----KVLNLGFNEITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLEL 210
K+ G +TD + K NL + + C GI D L +L+ L L L L
Sbjct: 399 ACKLRKIRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNL 458
Query: 211 SD-TQVGSSGLRHL---SGLTNLESINLS-FTGISDGSLRKLAG-LSSLKSLNL-DARQI 263
++ ++G GL+ + +NLS +SD S+ KL+ +L L+L + +
Sbjct: 459 ANCVRIGDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHL 518
Query: 264 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG-GGLTDAGVK 317
T G+ + ++ L +DL G I++ G L K L+ L + +TD G++
Sbjct: 519 TAQGIGYIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQ 573
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 140/294 (47%), Gaps = 25/294 (8%)
Query: 112 LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVL--NLGFNEITD 169
LN GC + S+S +L LN++ C D + G VL NL IT+
Sbjct: 226 LNFRGCLLRPKTFRSVSHCRNLQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITN 285
Query: 170 ECLVHL-KGLTNLESLNLDSCG-IGDEGLVNLT---GLCNLKCLELSD-TQVGSSGLRHL 223
+ L + NL++L+L C D+GL L G L L+LS TQ+ G R++
Sbjct: 286 RTMRLLPRHFHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYI 345
Query: 224 S----GLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNLD-ARQITDTGLAALTSLTGL 277
+ G+ +L +IN ++D ++ L S + SL A I+D AL++ L
Sbjct: 346 ANSCTGIMHL-TIN-DMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSA-CKL 402
Query: 278 THLDLFG-ARITDSGAAYL-RNFKNLRSLEICG-GGLTDAGVKHIKDLSSLTLLNLSQNC 334
+ G R+TD+ ++ +N+ NL + + G+TD+ ++ + L LT+LNL+
Sbjct: 403 RKIRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCV 462
Query: 335 NLTDKTL-ELISGLTGL--VSLNVSNS-RITSAGLRHL-KPLKNLRSLTLESCK 383
+ D L + + G + LN+SN R++ A + L + NL L+L +C+
Sbjct: 463 RIGDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCE 516
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 169/378 (44%), Gaps = 64/378 (16%)
Query: 8 LSNLTSLSFRRNNAITAQGMKAFA---GLINLVKLDLERCTRIH-----------GGLVN 53
NL +LS T +G++ G L+ LDL CT+I G+++
Sbjct: 295 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMH 354
Query: 54 L-------------KGLM----KLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSK-V 95
L K L+ ++ SL I+D + LS L+ ++ +K V
Sbjct: 355 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSA-CKLRKIRFEGNKRV 413
Query: 96 TDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 153
TD+ ++ K L+ + + C +T + L SLS L L LNL C
Sbjct: 414 TDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANC------------ 461
Query: 154 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLC-NLKCLELS 211
+++ ++G + D + LNL +C + D ++ L+ C NL L L
Sbjct: 462 ---VRIGDMGLKQFLDG-----PASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLR 513
Query: 212 DTQ-VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL-DARQITDTGLA 269
+ + + + G+ ++ + +L SI+LS T IS+ L L+ LK L++ + +ITD G+
Sbjct: 514 NCEHLTAQGIGYIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQ 573
Query: 270 AL-TSLTGLTHLDL-FGARITDSGAAYLRNF-KNLRSLEICG-GGLTDAGVKHIK-DLSS 324
A S L HLD+ + ++++D L + NL SL I G +TD+ ++ +
Sbjct: 574 AFCKSSLILEHLDVSYCSQLSDMIIKALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHY 633
Query: 325 LTLLNLSQNCNLTDKTLE 342
L +L++S LTD+ LE
Sbjct: 634 LHILDISGCVLLTDQILE 651
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 9/164 (5%)
Query: 9 SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC 68
NL LS R +TAQG+ + +LV +DL + GL L KL+ L++ C
Sbjct: 505 PNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVSEC 564
Query: 69 NCITDSDMKPL--SGLTNLKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGCP-VTAAC 123
ITD ++ S L L+ L +S CS+++D I L LT L++ GCP +T +
Sbjct: 565 YRITDDGIQAFCKSSLI-LEHLDVSYCSQLSDMIIKALAIYCINLTSLSIAGCPKITDSA 623
Query: 124 LDSLSA-LGSLFYLNLNRCQLSDDGCEKFSKIG--SLKVLNLGF 164
++ LSA L L+++ C L D + +IG L++L + +
Sbjct: 624 MEMLSAKCHYLHILDISGCVLLTDQILEDLQIGCKQLRILKMQY 667
>sp|Q61809|LRRN1_MOUSE Leucine-rich repeat neuronal protein 1 OS=Mus musculus GN=Lrrn1
PE=2 SV=1
Length = 716
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 142/340 (41%), Gaps = 32/340 (9%)
Query: 43 RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAY 102
R TRI G L + ++ L+S NI T +++ L LT L Q + + + + G+A
Sbjct: 62 RLTRIPGNLSSDTQVLLLQSNNI----AKTVDELQQLFNLTELDFSQNNFTNIKEVGLAN 117
Query: 103 LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL 162
L L L L + +T CL LS L L+ +N Q+S FS + +L L+L
Sbjct: 118 LTQLTTLHLEENQISEMTDYCLQDLSNLQELY---INHNQISTISANAFSGLKNLLRLHL 174
Query: 163 GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 222
N+ L ++S DS NL+ L + + V +
Sbjct: 175 NSNK-----------LKVIDSRWFDSTP-------------NLEILMIGENPVIGILDMN 210
Query: 223 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 282
L+NL S+ L+ ++D L GL SL+SL+ ++ AL + L LDL
Sbjct: 211 FRPLSNLRSLVLAGMYLTDVPGNALVGLDSLESLSFYDNKLIKVPQLALQKVPNLKFLDL 270
Query: 283 FGARITDSGAAYLRNFKNLRSLEICG-GGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTL 341
I +N L+ L I G L + +L LT L + N L+
Sbjct: 271 NKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHR 330
Query: 342 ELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 381
+ L SL ++N+ + + + ++ L NLR +++ S
Sbjct: 331 LAFRSVPALESLMLNNNALNAVYQKTVESLPNLREISIHS 370
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 126/289 (43%), Gaps = 19/289 (6%)
Query: 121 AACLDSLSALGSLFYLNL---NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKG 177
A +D L L +L L+ N + + G +++ +L + +E+TD CL +
Sbjct: 85 AKTVDELQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQISEMTDYCL---QD 141
Query: 178 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL--- 234
L+NL+ L ++ I +GL NL L L+ ++ R NLE + +
Sbjct: 142 LSNLQELYINHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGEN 201
Query: 235 SFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 294
GI D + R LS+L+SL L +TD AL L L L + ++
Sbjct: 202 PVIGILDMNFRP---LSNLRSLVLAGMYLTDVPGNALVGLDSLESLSFYDNKLIKVPQLA 258
Query: 295 LRNFKNLRSLEICGGG---LTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLV 351
L+ NL+ L++ + + K++ L L + N+ + ++ L+ + LT L
Sbjct: 259 LQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLE 318
Query: 352 SLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 400
+ N N +++ + + L SL L + + A K ++S LPNL
Sbjct: 319 ATN--NPKLSYIHRLAFRSVPALESLMLNNNALNAVYQKTVES--LPNL 363
Score = 36.2 bits (82), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 82/186 (44%), Gaps = 16/186 (8%)
Query: 5 LSGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERC------TRIHGGLVNLKGLM 58
L LSNL L + +N I+ AF+GL NL++L L +R NL+ LM
Sbjct: 139 LQDLSNLQEL-YINHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILM 197
Query: 59 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP 118
E+ I I D + +PLS NL+SL ++ +TD L GL L L+
Sbjct: 198 IGENPVIG----ILDMNFRPLS---NLRSLVLAGMYLTDVPGNALVGLDSLESLSFYDNK 250
Query: 119 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 178
+ +L + +L +L+LN+ + F + LK LG N + + V L
Sbjct: 251 LIKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLK--ELGINNMGELVSVDRYAL 308
Query: 179 TNLESL 184
NL L
Sbjct: 309 DNLPEL 314
Score = 35.8 bits (81), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 103/256 (40%), Gaps = 7/256 (2%)
Query: 3 ENLSGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLES 62
+ L L NLT L F +NN + + A L L L LE L+ L L+
Sbjct: 89 DELQQLFNLTELDFSQNNFTNIKEV-GLANLTQLTTLHLEENQISEMTDYCLQDLSNLQE 147
Query: 63 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 122
L I N I+ SGL NL L ++ +K+ + L +L + PV
Sbjct: 148 LYIN-HNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGI 206
Query: 123 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 182
+ L +L L L L+D + SL+ L+ N++ + L+ + NL+
Sbjct: 207 LDMNFRPLSNLRSLVLAGMYLTDVPGNALVGLDSLESLSFYDNKLIKVPQLALQKVPNLK 266
Query: 183 SLNLDSCGIGDEGLVNLTGLCNLKCLELSD----TQVGSSGLRHLSGLTNLESI-NLSFT 237
L+L+ I + + LK L +++ V L +L LT LE+ N +
Sbjct: 267 FLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLS 326
Query: 238 GISDGSLRKLAGLSSL 253
I + R + L SL
Sbjct: 327 YIHRLAFRSVPALESL 342
>sp|Q52KR2|LRIG2_MOUSE Leucine-rich repeats and immunoglobulin-like domains protein 2
OS=Mus musculus GN=Lrig2 PE=2 SV=1
Length = 1054
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 129/299 (43%), Gaps = 9/299 (3%)
Query: 69 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLK--GLQKLTLLNLEGCPVTAACLDS 126
N I + + + + L+SL +S + +++ + L+ L L N + A C D+
Sbjct: 129 NLIPEINAEAFELYSALESLDLSSNIISEIKTSSFPRMSLKYLNLSNNRISTLEAGCFDN 188
Query: 127 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 186
LS SL + LNR ++S + F K+ L+ L L N I + +GL +L SL +
Sbjct: 189 LS--DSLLVVKLNRNRISMIPPKVF-KLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKM 245
Query: 187 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 246
GI GL N++ LEL + L GL L+ + +S I S
Sbjct: 246 QRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDA 305
Query: 247 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 306
L L+L Q+T +A L+ L L+L R+T R NL++L++
Sbjct: 306 WEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDL 365
Query: 307 CGGGLTDA---GVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITS 362
++ A + L SLT L L N + T + GL L L+++N+ I S
Sbjct: 366 RNNDISWAIEDASEAFSGLKSLTKLILQGN-RIKSVTQKAFIGLESLEYLDLNNNAIMS 423
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 7/224 (3%)
Query: 20 NAITAQGMKAFAGLINLVKLDLERC-TRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 78
N I+ K F L +L L+L+R +I GL +GL L SL ++ N I+
Sbjct: 201 NRISMIPPKVFK-LPHLQFLELKRNRIKIVEGLT-FQGLDSLRSLKMQ-RNGISKLKDGA 257
Query: 79 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 138
GL N++ L++ + +T +L GL+ L L + + D+ L L+L
Sbjct: 258 FFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDAWEFCQRLSELDL 317
Query: 139 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG---DEG 195
+ QL+ F + L+ LNLG N +T + L+NL++L+L + I ++
Sbjct: 318 SYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDISWAIEDA 377
Query: 196 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 239
+GL +L L L ++ S + GL +LE ++L+ I
Sbjct: 378 SEAFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNNNAI 421
>sp|Q32Q07|LRRN1_RAT Leucine-rich repeat neuronal protein 1 OS=Rattus norvegicus
GN=Lrrn1 PE=2 SV=1
Length = 716
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 142/340 (41%), Gaps = 32/340 (9%)
Query: 43 RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAY 102
R TRI G L + ++ L+S NI T +++ L LT L Q + + + + G+A
Sbjct: 62 RLTRIPGNLSSDTQVLLLQSNNI----AKTVDELQQLFNLTELDFSQNNFTNIKEVGLAN 117
Query: 103 LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL 162
L L L L + +T CL LS L L+ +N Q+S FS + +L L+L
Sbjct: 118 LTQLTTLHLEENQISEMTDYCLQDLSNLQELY---INHNQISSISANAFSGLKNLLRLHL 174
Query: 163 GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 222
N+ L ++S DS NL+ L + + V +
Sbjct: 175 NSNK-----------LKVIDSRWFDSTP-------------NLEILMIGENPVIGILDMN 210
Query: 223 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 282
L+NL S+ L+ ++D L GL SL+SL+ ++ AL + L LDL
Sbjct: 211 FRPLSNLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLIKVPQLALQKVPNLKFLDL 270
Query: 283 FGARITDSGAAYLRNFKNLRSLEICG-GGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTL 341
I +N L+ L I G L + +L LT L + N L+
Sbjct: 271 NKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHR 330
Query: 342 ELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 381
+ L SL ++N+ + + + ++ L NLR +++ S
Sbjct: 331 LAFRSVPALESLMLNNNALNAVYQKTVESLPNLREISIHS 370
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 126/289 (43%), Gaps = 19/289 (6%)
Query: 121 AACLDSLSALGSLFYLNL---NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKG 177
A +D L L +L L+ N + + G +++ +L + +E+TD CL +
Sbjct: 85 AKTVDELQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQISEMTDYCL---QD 141
Query: 178 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL--- 234
L+NL+ L ++ I +GL NL L L+ ++ R NLE + +
Sbjct: 142 LSNLQELYINHNQISSISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGEN 201
Query: 235 SFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 294
GI D + R LS+L+SL L +TD AL L L L + ++
Sbjct: 202 PVIGILDMNFRP---LSNLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLIKVPQLA 258
Query: 295 LRNFKNLRSLEICGGG---LTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLV 351
L+ NL+ L++ + + K++ L L + N+ + ++ L+ + LT L
Sbjct: 259 LQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLE 318
Query: 352 SLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 400
+ N N +++ + + L SL L + + A K ++S LPNL
Sbjct: 319 ATN--NPKLSYIHRLAFRSVPALESLMLNNNALNAVYQKTVES--LPNL 363
Score = 36.2 bits (82), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 83/186 (44%), Gaps = 16/186 (8%)
Query: 5 LSGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERC------TRIHGGLVNLKGLM 58
L LSNL L + +N I++ AF+GL NL++L L +R NL+ LM
Sbjct: 139 LQDLSNLQEL-YINHNQISSISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILM 197
Query: 59 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP 118
E+ I I D + +PLS NL+SL ++ +TD L GL L L+
Sbjct: 198 IGENPVIG----ILDMNFRPLS---NLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNK 250
Query: 119 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 178
+ +L + +L +L+LN+ + F + LK LG N + + V L
Sbjct: 251 LIKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLK--ELGINNMGELVSVDRYAL 308
Query: 179 TNLESL 184
NL L
Sbjct: 309 DNLPEL 314
Score = 35.8 bits (81), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 103/256 (40%), Gaps = 7/256 (2%)
Query: 3 ENLSGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLES 62
+ L L NLT L F +NN + + A L L L LE L+ L L+
Sbjct: 89 DELQQLFNLTELDFSQNNFTNIKEV-GLANLTQLTTLHLEENQISEMTDYCLQDLSNLQE 147
Query: 63 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 122
L I N I+ SGL NL L ++ +K+ + L +L + PV
Sbjct: 148 LYIN-HNQISSISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGI 206
Query: 123 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 182
+ L +L L L L+D + SL+ L+ N++ + L+ + NL+
Sbjct: 207 LDMNFRPLSNLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLIKVPQLALQKVPNLK 266
Query: 183 SLNLDSCGIGDEGLVNLTGLCNLKCLELSD----TQVGSSGLRHLSGLTNLESI-NLSFT 237
L+L+ I + + LK L +++ V L +L LT LE+ N +
Sbjct: 267 FLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLS 326
Query: 238 GISDGSLRKLAGLSSL 253
I + R + L SL
Sbjct: 327 YIHRLAFRSVPALESL 342
>sp|P51886|LUM_RAT Lumican OS=Rattus norvegicus GN=Lum PE=2 SV=1
Length = 338
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 11/145 (7%)
Query: 151 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD-EGLVNLTGLCNLKCLE 209
FSK+ LK L++ +N +T+ K L +L+ N +G +GLVNLT + L+ +
Sbjct: 112 FSKLKQLKKLHINYNNLTESVGPLPKSLQDLQLANNKISKLGSFDGLVNLTFIY-LQHNQ 170
Query: 210 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL-SSLKSLNLDARQITDTGL 268
L + V +S L GL +LE ++LSF +S + AGL +SL +L LD +IT+
Sbjct: 171 LKEEAVSAS----LKGLKSLEYLDLSFNQMS----KLPAGLPTSLLTLYLDNNKITNIPD 222
Query: 269 AALTSLTGLTHLDLFGARITDSGAA 293
TGL +L L + DSG
Sbjct: 223 EYFNRFTGLQYLRLSHNELADSGVP 247
>sp|Q7L985|LIGO2_HUMAN Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 2 OS=Homo sapiens GN=LINGO2
PE=1 SV=1
Length = 606
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 81/191 (42%), Gaps = 16/191 (8%)
Query: 151 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC---GIGDEGLVNLTGLCNLKC 207
F + +LK L +G N++ GL +LE L L+ C + E L +L L +L
Sbjct: 149 FQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLISLHL 208
Query: 208 LELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTG 267
L+ + + L L +LE I L + +SL LNL + +T+T
Sbjct: 209 KHLNINNMPVYAFKRLFHLKHLE--------IDYWPLLDMMPANSLYGLNLTSLSVTNTN 260
Query: 268 LA-----ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDL 322
L+ A L LTHL+L I+ A + L+ L I G L + L
Sbjct: 261 LSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGL 320
Query: 323 SSLTLLNLSQN 333
L +LN+SQN
Sbjct: 321 RFLRVLNVSQN 331
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 115/279 (41%), Gaps = 17/279 (6%)
Query: 115 EGCPVTAACLD-------SLSALGSLFYLNLNRCQLSDDGCE-----KFSKIGSLKVLNL 162
EG P+ LD S++ + Y L LSD+ F+ + +L+ L L
Sbjct: 53 EGIPIETKILDLSKNRLKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRL 112
Query: 163 GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 222
N + L GL+NL L++ I L NLK LE+ D + R
Sbjct: 113 KGNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRA 172
Query: 223 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 282
SGL +LE + L ++ L+ L SL SL+L I + + A L L HL++
Sbjct: 173 FSGLLSLEQLTLEKCNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEI 232
Query: 283 FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLE 342
+ D A NL SL + L+ K L LT LNLS N T+E
Sbjct: 233 DYWPLLDMMPANSLYGLNLTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYN---PISTIE 289
Query: 343 --LISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 379
+ S L L L++ +++ + + L+ LR L +
Sbjct: 290 AGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNV 328
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 1/175 (0%)
Query: 206 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 265
K L+LS ++ S LE I+LS I++ L +L+SL L ++
Sbjct: 60 KILDLSKNRLKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKL 119
Query: 266 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSL 325
L T L+ LT LD+ +I ++ NL+SLE+ L + L SL
Sbjct: 120 VPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSL 179
Query: 326 TLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 380
L L + CNLT E +S L L+SL++ + I + + K L +L+ L ++
Sbjct: 180 EQLTL-EKCNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEID 233
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 7/243 (2%)
Query: 19 NNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 76
+N I AF L NL L L+ R + G+ GL L L+I + D
Sbjct: 90 DNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGV--FTGLSNLTKLDISENKIVILLDY 147
Query: 77 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 136
L NLKSL++ + + GL L L LE C +TA ++LS L SL L
Sbjct: 148 M-FQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLISL 206
Query: 137 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH-LKGLTNLESLNLDSCGIGDEG 195
+L +++ F ++ LK L + + + D + L GL NL SL++ + +
Sbjct: 207 HLKHLNINNMPVYAFKRLFHLKHLEIDYWPLLDMMPANSLYGL-NLTSLSVTNTNLSTVP 265
Query: 196 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 255
+ L L L LS + + S L L+ +++ + GL L+
Sbjct: 266 FLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLRV 325
Query: 256 LNL 258
LN+
Sbjct: 326 LNV 328
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 77/187 (41%), Gaps = 30/187 (16%)
Query: 5 LSGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERC----------------TRIH 48
L NL SL N+ + +AF+GL++L +L LE+C +H
Sbjct: 149 FQDLHNLKSLEVGDNDLVYI-SHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLISLH 207
Query: 49 GGLVNL--------KGLMKLESLNIKWCNCITDSDMKPLSGLT--NLKSLQISCSKVTDS 98
+N+ K L L+ L I + + DM P + L NL SL ++ + ++
Sbjct: 208 LKHLNINNMPVYAFKRLFHLKHLEIDYWPLL---DMMPANSLYGLNLTSLSVTNTNLSTV 264
Query: 99 GIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLK 158
K L LT LNL P++ S L L L++ QL F + L+
Sbjct: 265 PFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLR 324
Query: 159 VLNLGFN 165
VLN+ N
Sbjct: 325 VLNVSQN 331
Score = 37.0 bits (84), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 5/135 (3%)
Query: 254 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 313
K L+L ++ S L +DL I + N NLRSL + G L
Sbjct: 60 KILDLSKNRLKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKL 119
Query: 314 AGVKHIKDLSSLTLLNLSQN--CNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPL 371
+ LS+LT L++S+N L D + L L SL V ++ + R L
Sbjct: 120 VPLGVFTGLSNLTKLDISENKIVILLDY---MFQDLHNLKSLEVGDNDLVYISHRAFSGL 176
Query: 372 KNLRSLTLESCKVTA 386
+L LTLE C +TA
Sbjct: 177 LSLEQLTLEKCNLTA 191
>sp|A2ARI4|LGR4_MOUSE Leucine-rich repeat-containing G-protein coupled receptor 4 OS=Mus
musculus GN=Lgr4 PE=2 SV=1
Length = 951
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 103/252 (40%), Gaps = 30/252 (11%)
Query: 77 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 136
K LSGL LK L + +++ ++GL L L L+ +T+ DS L L +L
Sbjct: 99 KALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHL 158
Query: 137 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 196
L+ L++ S + +L+ L L N I+ I D
Sbjct: 159 WLDDNILTEVPVRPLSNLPTLQALTLALNNIS---------------------SIPDFAF 197
Query: 197 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 256
NL+ L L L + ++ S GL NLE+++L++ + D + + L SLK L
Sbjct: 198 TNLSSLV---VLHLHNNKIKSLSQHCFDGLDNLETLDLNYNNL-DEFPQAIKALPSLKEL 253
Query: 257 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD--- 313
+ I+ A L + L+ ++ G + N +L SL I G L
Sbjct: 254 GFHSNSISVIPDGAFAGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASLVQWFP 313
Query: 314 --AGVKHIKDLS 323
AG H++ L+
Sbjct: 314 NLAGTVHLESLT 325
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 153/377 (40%), Gaps = 88/377 (23%)
Query: 5 LSGLSNLTSLSFRRNN--AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLES 62
LSGL L L+ + N + ++ ++ + L +L +LD T + + +GL++L
Sbjct: 101 LSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSL-RLDANHITSVPED--SFEGLVQLRH 157
Query: 63 LNIKWC--NCITDSDMKPLSGLTNLKSLQIS---CSKVTDSGIAYLKGLQKLTLLNLEGC 117
L W N +T+ ++PLS L L++L ++ S + D L L L L N +
Sbjct: 158 L---WLDDNILTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIK 214
Query: 118 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT---DECL-- 172
++ C D L L +L +LN L D+ + + SLK L N I+ D
Sbjct: 215 SLSQHCFDGLDNLETL---DLNYNNL-DEFPQAIKALPSLKELGFHSNSISVIPDGAFAG 270
Query: 173 ------VHL-------------KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT 213
+HL L++L SL + + + NL G +L+ L L+ T
Sbjct: 271 NPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASLV-QWFPNLAGTVHLESLTLTGT 329
Query: 214 QVGS----------------------SGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 251
++ S L +G LE I+L IS GL+
Sbjct: 330 KISSIPDDLCQNQKMLRTLDLSYNDIRDLPSFNGCRALEEISLQRNQISLIKETTFQGLT 389
Query: 252 SLKSLNLD---ARQITDTGLAALTSLT------------------GLTHLDLFG-ARITD 289
SL+ L+L R+I A L ++T GL L L G ++ D
Sbjct: 390 SLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFPTEGLNGLNQLKLVGNFQLKD 449
Query: 290 SGAAYLRNFKNLRSLEI 306
+ AA R+F NLRSL +
Sbjct: 450 ALAA--RDFANLRSLSV 464
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 2/177 (1%)
Query: 205 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIT 264
L+ L+L+ + + LSGL L+ + L + + GLS+L+SL LDA IT
Sbjct: 83 LEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHIT 142
Query: 265 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSS 324
+ L L HL L +T+ L N L++L + ++ +LSS
Sbjct: 143 SVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSS 202
Query: 325 LTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 381
L +L+L N + + GL L +L+++ + + + +K L +L+ L S
Sbjct: 203 LVVLHLHNN-KIKSLSQHCFDGLDNLETLDLNYNNLDEFP-QAIKALPSLKELGFHS 257
Score = 40.4 bits (93), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 59/134 (44%), Gaps = 8/134 (5%)
Query: 267 GLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLT 326
GL+A T LD+ IT +NF L L++ G L+ K + L L
Sbjct: 54 GLSAFTQA-----LDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELK 108
Query: 327 LLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 386
+L L QN L E I GL+ L SL + + ITS + L LR L L+ +T
Sbjct: 109 VLTL-QNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTE 167
Query: 387 NDIKRLQSRDLPNL 400
++ L +LP L
Sbjct: 168 VPVRPLS--NLPTL 179
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 83/204 (40%), Gaps = 2/204 (0%)
Query: 158 KVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS 217
+ L++ N IT K LE L L + L+GL LK L L + Q+ +
Sbjct: 60 QALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKT 119
Query: 218 SGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGL 277
+ GL+ L+S+ L I+ GL L+ L LD +T+ + L++L L
Sbjct: 120 VPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTL 179
Query: 278 THLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLT 337
L L I+ N +L L + + L +L L+L+ N NL
Sbjct: 180 QALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYN-NL- 237
Query: 338 DKTLELISGLTGLVSLNVSNSRIT 361
D+ + I L L L ++ I+
Sbjct: 238 DEFPQAIKALPSLKELGFHSNSIS 261
>sp|Q96IG2|FXL20_HUMAN F-box/LRR-repeat protein 20 OS=Homo sapiens GN=FBXL20 PE=1 SV=2
Length = 436
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 124/303 (40%), Gaps = 70/303 (23%)
Query: 36 LVKLDLERCTRIHGGLVNLKGLMK----LESLNIKWCNCITDSDMKPL-SGLTNLKSLQI 90
L LDL CT I ++LK L + LE LNI WC+ +T ++ L G LK+L +
Sbjct: 145 LRHLDLASCTSITN--MSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFL 202
Query: 91 ---------------------------SCSKVTDSG-IAYLKGLQKLTLLNLEGCP-VTA 121
+C ++TD G I +G KL L GC +T
Sbjct: 203 KGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITD 262
Query: 122 ACLDSLSA-LGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLT 179
A L++L L L + RC QL+D +GF + C
Sbjct: 263 AILNALGQNCPRLRILEVARCSQLTD----------------VGFTTLARNC-------H 299
Query: 180 NLESLNLDSC-GIGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHL----SGLTNLESI 232
LE ++L+ C I D L+ L+ C L+ L LS + + G+RHL LE I
Sbjct: 300 ELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVI 359
Query: 233 NLSFTG-ISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDS 290
L I+D SL L SL+ + L D +QIT G+ L + + + A +T
Sbjct: 360 ELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPP 419
Query: 291 GAA 293
+
Sbjct: 420 PSV 422
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 133/298 (44%), Gaps = 57/298 (19%)
Query: 60 LESLNIKWCNCITDSDMKPLSGL-TNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC 117
+E LN+ C TD+ LS + L+ L + SC+ +T+ + L EGC
Sbjct: 119 IEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALS----------EGC 168
Query: 118 PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLNL-GFNEITDECLVH 174
P+ L LN++ C Q++ DG + + G LK L L G ++ DE L +
Sbjct: 169 PL-------------LEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKY 215
Query: 175 LKG-LTNLESLNLDSC-GIGDEGLV-------NLTGLCNLKCLELSDTQVGSSGLRHLSG 225
+ L +LNL +C I DEGL+ L LC C ++D + + G ++
Sbjct: 216 IGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALG-QNCPR 274
Query: 226 LTNLESINLSFTGISDGSLRKLA-GLSSLKSLNLD-ARQITDTGLAALT------SLTGL 277
L LE S ++D LA L+ ++L+ QITD+ L L+ + L
Sbjct: 275 LRILEVARCS--QLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSL 332
Query: 278 THLDLFGARITDSGAAYLRN----FKNLRSLEICGGGL-TDAGVKHIKDLSSLTLLNL 330
+H +L ITD G +L N L +E+ L TDA ++H+K SL + L
Sbjct: 333 SHCEL----ITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIEL 386
>sp|Q58DG6|FXL20_BOVIN F-box/LRR-repeat protein 20 OS=Bos taurus GN=FBXL20 PE=2 SV=2
Length = 436
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 124/303 (40%), Gaps = 70/303 (23%)
Query: 36 LVKLDLERCTRIHGGLVNLKGLMK----LESLNIKWCNCITDSDMKPL-SGLTNLKSLQI 90
L LDL CT I ++LK L + LE LNI WC+ +T ++ L G LK+L +
Sbjct: 145 LRHLDLASCTSITN--MSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFL 202
Query: 91 ---------------------------SCSKVTDSG-IAYLKGLQKLTLLNLEGCP-VTA 121
+C ++TD G I +G KL L GC +T
Sbjct: 203 KGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITD 262
Query: 122 ACLDSLSA-LGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLT 179
A L++L L L + RC QL+D +GF + C
Sbjct: 263 AILNALGQNCPRLRILEVARCSQLTD----------------VGFTTLARNC-------H 299
Query: 180 NLESLNLDSC-GIGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHL----SGLTNLESI 232
LE ++L+ C I D L+ L+ C L+ L LS + + G+RHL LE I
Sbjct: 300 ELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVI 359
Query: 233 NLSFTG-ISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDS 290
L I+D SL L SL+ + L D +QIT G+ L + + + A +T
Sbjct: 360 ELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPP 419
Query: 291 GAA 293
+
Sbjct: 420 PSV 422
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 133/298 (44%), Gaps = 57/298 (19%)
Query: 60 LESLNIKWCNCITDSDMKPLSGL-TNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC 117
+E LN+ C TD+ LS + L+ L + SC+ +T+ + L EGC
Sbjct: 119 IEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALS----------EGC 168
Query: 118 PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLNL-GFNEITDECLVH 174
P+ L LN++ C Q++ DG + + G LK L L G ++ DE L +
Sbjct: 169 PL-------------LEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKY 215
Query: 175 LKG-LTNLESLNLDSC-GIGDEGLV-------NLTGLCNLKCLELSDTQVGSSGLRHLSG 225
+ L +LNL +C I DEGL+ L LC C ++D + + G ++
Sbjct: 216 IGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALG-QNCPR 274
Query: 226 LTNLESINLSFTGISDGSLRKLA-GLSSLKSLNLD-ARQITDTGLAALT------SLTGL 277
L LE S ++D LA L+ ++L+ QITD+ L L+ + L
Sbjct: 275 LRILEVARCS--QLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSL 332
Query: 278 THLDLFGARITDSGAAYLRN----FKNLRSLEICGGGL-TDAGVKHIKDLSSLTLLNL 330
+H +L ITD G +L N L +E+ L TDA ++H+K SL + L
Sbjct: 333 SHCEL----ITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIEL 386
>sp|Q9CZV8|FXL20_MOUSE F-box/LRR-repeat protein 20 OS=Mus musculus GN=Fbxl20 PE=1 SV=3
Length = 436
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 124/303 (40%), Gaps = 70/303 (23%)
Query: 36 LVKLDLERCTRIHGGLVNLKGLMK----LESLNIKWCNCITDSDMKPL-SGLTNLKSLQI 90
L LDL CT I ++LK L + LE LNI WC+ +T ++ L G LK+L +
Sbjct: 145 LRHLDLASCTSITN--MSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFL 202
Query: 91 ---------------------------SCSKVTDSG-IAYLKGLQKLTLLNLEGCP-VTA 121
+C ++TD G I +G KL L GC +T
Sbjct: 203 KGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITD 262
Query: 122 ACLDSLSA-LGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLT 179
A L++L L L + RC QL+D +GF + C
Sbjct: 263 AILNALGQNCPRLRILEVARCSQLTD----------------VGFTTLARNC-------H 299
Query: 180 NLESLNLDSC-GIGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHL----SGLTNLESI 232
LE ++L+ C I D L+ L+ C L+ L LS + + G+RHL LE I
Sbjct: 300 ELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVI 359
Query: 233 NLSFTG-ISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDS 290
L I+D SL L SL+ + L D +QIT G+ L + + + A +T
Sbjct: 360 ELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPP 419
Query: 291 GAA 293
+
Sbjct: 420 PSV 422
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 142/303 (46%), Gaps = 41/303 (13%)
Query: 60 LESLNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYL-KGLQKLTLLNL 114
L L+++ C + D+ ++ + N +++++ C+K TD+ L K KL L+L
Sbjct: 93 LRKLSLRGCLGVGDNALRTFA--QNCRNIEVLSLNGCTKTTDATCTSLSKFCSKLRHLDL 150
Query: 115 EGC-PVTAACLDSLSALGSLF-YLNLNRC-QLSDDGCEKFSK-IGSLKVLNL-GFNEITD 169
C +T L +LS L LN++ C Q++ DG + + G LK L L G ++ D
Sbjct: 151 ASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLED 210
Query: 170 ECLVHLKG-LTNLESLNLDSC-GIGDEGLV-------NLTGLCNLKCLELSDTQVGSSGL 220
E L ++ L +LNL +C I DEGL+ L LC C ++D + + G
Sbjct: 211 EALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALG- 269
Query: 221 RHLSGLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNLD-ARQITDTGLAALT------ 272
++ L LE S ++D LA L+ ++L+ QITD+ L L+
Sbjct: 270 QNCPRLRILEVARCS--QLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRL 327
Query: 273 SLTGLTHLDLFGARITDSGAAYLRN----FKNLRSLEICGGGL-TDAGVKHIKDLSSLTL 327
+ L+H +L ITD G +L N L +E+ L TDA ++H+K SL
Sbjct: 328 QVLSLSHCEL----ITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLER 383
Query: 328 LNL 330
+ L
Sbjct: 384 IEL 386
>sp|Q9JJ28|FLII_MOUSE Protein flightless-1 homolog OS=Mus musculus GN=Flii PE=1 SV=1
Length = 1271
Score = 53.1 bits (126), Expect = 4e-06, Method: Composition-based stats.
Identities = 73/264 (27%), Positives = 126/264 (47%), Gaps = 22/264 (8%)
Query: 79 LSGLTNLKSLQISCSKVTDSGIAYL----KGLQKLTLLNLEGCPVTAACLDSLSALGSLF 134
+ +T+L+ L K+ +G+ YL LQKL L++ +T LS+L SL
Sbjct: 29 VKAMTSLRWL-----KLNRTGLCYLPEELAALQKLEHLSVSHNHLTT-LHGELSSLPSLR 82
Query: 135 YLNLNRCQLSDDGC-EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG- 192
+ L + G + K+ L VL+L N++T EC L+ N+ LNL GI
Sbjct: 83 AIVARANSLKNSGVPDDIFKLDDLSVLDLSHNQLT-ECPRELENAKNMLVLNLSHNGIDS 141
Query: 193 --DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 250
++ +NLT +L L+LS+ ++ S + L +L+++ L+ + LR+L +
Sbjct: 142 IPNQLFINLT---DLLYLDLSENRL-ESLPPQMRRLVHLQTLVLNGNPLLHAQLRQLPAM 197
Query: 251 SSLKSLNLDARQITDTGL-AALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG 309
+L++L+L Q T + L +L L+ L+ +DL +T L +LR L +
Sbjct: 198 MALQTLHLRNTQRTQSNLPTSLEGLSNLSDVDLSCNDLTRVPEC-LYTLPSLRRLNLSSN 256
Query: 310 GLTDAGVKHIKDLSSLTLLNLSQN 333
+ + + I L LNLS+N
Sbjct: 257 QIAELSL-CIDQWVHLETLNLSRN 279
Score = 37.4 bits (85), Expect = 0.18, Method: Composition-based stats.
Identities = 52/218 (23%), Positives = 100/218 (45%), Gaps = 32/218 (14%)
Query: 174 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 233
++K +T+L L L N TGLC L L+ L LE ++
Sbjct: 28 NVKAMTSLRWLKL-----------NRTGLCYLP--------------EELAALQKLEHLS 62
Query: 234 LSFTGISDGSLR-KLAGLSSLKSLNLDARQITDTGLAA-LTSLTGLTHLDLFGARITDSG 291
+S ++ +L +L+ L SL+++ A + ++G+ + L L+ LDL ++T+
Sbjct: 63 VSHNHLT--TLHGELSSLPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSHNQLTEC- 119
Query: 292 AAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLV 351
L N KN+ L + G+ + +L+ L L+LS+ N + + L L
Sbjct: 120 PRELENAKNMLVLNLSHNGIDSIPNQLFINLTDLLYLDLSE--NRLESLPPQMRRLVHLQ 177
Query: 352 SLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDI 389
+L ++ + + A LR L + L++L L + + T +++
Sbjct: 178 TLVLNGNPLLHAQLRQLPAMMALQTLHLRNTQRTQSNL 215
Score = 35.8 bits (81), Expect = 0.54, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 33 LINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISC 92
L++L L L +H L L +M L++L+++ + L GL+NL + +SC
Sbjct: 173 LVHLQTLVLNGNPLLHAQLRQLPAMMALQTLHLRNTQRTQSNLPTSLEGLSNLSDVDLSC 232
Query: 93 SKVTDSGIAYLKGLQKLTLLNLEGCPVT--AACLDSLSALGSLFYLNLNRCQLS 144
+ +T L L L LNL + + C+D L + LNL+R QL+
Sbjct: 233 NDLTRVP-ECLYTLPSLRRLNLSSNQIAELSLCIDQWVHLET---LNLSRNQLT 282
>sp|A4IIW9|LIGO1_XENTR Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Xenopus tropicalis
GN=lingo1 PE=2 SV=1
Length = 606
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 10/190 (5%)
Query: 149 EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC---GIGDEGLVNLTGLCNL 205
+ F + +LK L +G N++ +GL +LE L L+ C + E L +L GL L
Sbjct: 147 DMFQDLYNLKSLEVGDNDLVYISHRAFRGLNSLEELTLEKCNLTSVPTEALSHLHGLITL 206
Query: 206 KCLELSDTQVGSSGLRHLSGLTNLESINLSF--TGISDGSLRKLAGLSSLKSLNLDARQI 263
K L+ + + L L NLE + + T S+G L GL+ L SL++ +
Sbjct: 207 KLRYLNINVIRDYSFKRLYRLKNLEIAHWPYLDTMTSNG----LYGLN-LTSLSITHSNL 261
Query: 264 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLS 323
+ A+ L L L+L IT + L L+ + GG L+ + L+
Sbjct: 262 SSIPYVAIRHLVYLRFLNLSYNPITAVEGSMLYELLRLQEFHLVGGQLSVVEPYAFRGLN 321
Query: 324 SLTLLNLSQN 333
L +LN+S N
Sbjct: 322 HLKVLNVSSN 331
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 4/172 (2%)
Query: 206 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 265
+ L+LS ++ + S LE + L+ +S GL +L+SL L + ++
Sbjct: 60 RLLDLSKNRIKALNQDEFSAFPYLEELELNENIVSIIEPGAFNGLFNLRSLGLRSNRLKL 119
Query: 266 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSL 325
L T L+ LT LD+ +I ++ NL+SLE+ L + + L+SL
Sbjct: 120 IPLGVFTGLSNLTQLDISENKIVILLDDMFQDLYNLKSLEVGDNDLVYISHRAFRGLNSL 179
Query: 326 TLLNLSQNCNLTDKTLELISGLTGLVSLNVSN---SRITSAGLRHLKPLKNL 374
L L + CNLT E +S L GL++L + + I + L LKNL
Sbjct: 180 EELTL-EKCNLTSVPTEALSHLHGLITLKLRYLNINVIRDYSFKRLYRLKNL 230
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 90/211 (42%), Gaps = 34/211 (16%)
Query: 5 LSGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERC---TRIHGGLVNLKGL--MK 59
L NL SL N+ + +AF GL +L +L LE+C + L +L GL +K
Sbjct: 149 FQDLYNLKSLEVGDNDLVYI-SHRAFRGLNSLEELTLEKCNLTSVPTEALSHLHGLITLK 207
Query: 60 LESLNIKWCNCITDSDMKPLSGLTNLK---------------------SLQISCSKVTDS 98
L LNI N I D K L L NL+ SL I+ S ++
Sbjct: 208 LRYLNI---NVIRDYSFKRLYRLKNLEIAHWPYLDTMTSNGLYGLNLTSLSITHSNLSSI 264
Query: 99 GIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLK 158
++ L L LNL P+TA L L L +L QLS F + LK
Sbjct: 265 PYVAIRHLVYLRFLNLSYNPITAVEGSMLYELLRLQEFHLVGGQLSVVEPYAFRGLNHLK 324
Query: 159 VLNLGFNEIT--DECLVHLKGLTNLESLNLD 187
VLN+ N ++ +E H G NLE+L LD
Sbjct: 325 VLNVSSNYLSTLEESSFHSVG--NLETLILD 353
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 104/261 (39%), Gaps = 28/261 (10%)
Query: 5 LSGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLN 64
+GL NL SL R +N + + F GL NL +LD+ +
Sbjct: 101 FNGLFNLRSLGLR-SNRLKLIPLGVFTGLSNLTQLDISENKIV----------------- 142
Query: 65 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACL 124
I DM L NLKSL++ + + +GL L L LE C +T+
Sbjct: 143 ------ILLDDM--FQDLYNLKSLEVGDNDLVYISHRAFRGLNSLEELTLEKCNLTSVPT 194
Query: 125 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH-LKGLTNLES 183
++LS L L L L ++ F ++ LK L + D + L GL NL S
Sbjct: 195 EALSHLHGLITLKLRYLNINVIRDYSFKRLYRLKNLEIAHWPYLDTMTSNGLYGL-NLTS 253
Query: 184 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS 243
L++ + V + L L+ L LS + + L L L+ +L +S
Sbjct: 254 LSITHSNLSSIPYVAIRHLVYLRFLNLSYNPITAVEGSMLYELLRLQEFHLVGGQLSVVE 313
Query: 244 LRKLAGLSSLKSLNLDARQIT 264
GL+ LK LN+ + ++
Sbjct: 314 PYAFRGLNHLKVLNVSSNYLS 334
>sp|Q5MJ12|FXL16_RAT F-box/LRR-repeat protein 16 OS=Rattus norvegicus GN=Fbxl16 PE=2
SV=1
Length = 479
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 123/251 (49%), Gaps = 25/251 (9%)
Query: 147 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV----NLTGL 202
G E F +G V +L E D + KG+ ++++L I D GL + G+
Sbjct: 167 GFEGFCLVG---VSDLDICEFIDNYSLSKKGV---KAMSLKRSTITDAGLEVMLEQMQGV 220
Query: 203 CNLK---CLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 259
L+ C + ++ + SS ++ L+ + IN++ I+ ++ +L L +L L+L
Sbjct: 221 VRLELSGCNDFTEAGLWSSLSARITSLSVSDCINVADDAIA--AISQL--LPNLAELSLQ 276
Query: 260 ARQITDTGLAALTSLTGL-TH-LDLFGA-RITDSGAA-YLRNFKNLRSLEICG-GGLTDA 314
A +TDT LA T+ G TH L L IT+ G + + NL SL + G +TD
Sbjct: 277 AYHVTDTALAYFTARQGHSTHTLRLLSCWEITNHGVVNVVHSLPNLTSLSLSGCSKVTDD 336
Query: 315 GVKHI-KDLSSLTLLNLSQNCNLTDKTLELIS-GLTGLVSLNVSNS-RITSAGLRHLKPL 371
GV+ + ++L L L+LS +TD LE ++ L L L + RIT GL +L +
Sbjct: 337 GVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGLSYLSTM 396
Query: 372 KNLRSLTLESC 382
+LRSL L C
Sbjct: 397 SSLRSLYLRWC 407
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 125/258 (48%), Gaps = 27/258 (10%)
Query: 5 LSGLSNLTSLSFRRNNAITAQGMKAF---------AGL-------INLVKLDLERCTRIH 48
L G+S+L F N +++ +G+KA AGL +V+L+L C
Sbjct: 173 LVGVSDLDICEFIDNYSLSKKGVKAMSLKRSTITDAGLEVMLEQMQGVVRLELSGCNDFT 232
Query: 49 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGL-TNLKSLQISCSKVTDSGIAYL---K 104
+ ++ SL++ C + D + +S L NL L + VTD+ +AY +
Sbjct: 233 EAGLWSSLSARITSLSVSDCINVADDAIAAISQLLPNLAELSLQAYHVTDTALAYFTARQ 292
Query: 105 GLQKLTLLNLEGCPVT-AACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLN 161
G TL L +T ++ + +L +L L+L+ C +++DDG E ++ + L+ L+
Sbjct: 293 GHSTHTLRLLSCWEITNHGVVNVVHSLPNLTSLSLSGCSKVTDDGVELVAENLRKLRSLD 352
Query: 162 LGF-NEITDECLVHLK-GLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGS 217
L + ITD L ++ L LE L LD C I D GL L+ + +L+ L L QV
Sbjct: 353 LSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQVQD 412
Query: 218 SGLRHLSGLTNLESINLS 235
GL+HL + +L ++L+
Sbjct: 413 FGLKHLLAMRSLRLLSLA 430
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 33 LINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQ 89
L NL L L C+++ V L + L KL SL++ WC ITD ++ ++ L L+ L
Sbjct: 319 LPNLTSLSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEELV 378
Query: 90 IS-CSKVTDSGIAYLKGLQKLTLLNLEG-CPVTAACLDSLSALGSLFYLNLNRCQL 143
+ C ++TD+G++YL + L L L C V L L A+ SL L+L C L
Sbjct: 379 LDRCVRITDTGLSYLSTMSSLRSLYLRWCCQVQDFGLKHLLAMRSLRLLSLAGCPL 434
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 117/288 (40%), Gaps = 71/288 (24%)
Query: 137 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL-VHLKGLTNLESLNLDSC------ 189
+L+ C+ D+ SK G +K ++L + ITD L V L+ + + L L C
Sbjct: 178 DLDICEFIDN--YSLSKKG-VKAMSLKRSTITDAGLEVMLEQMQGVVRLELSGCNDFTEA 234
Query: 190 GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA- 248
G+ +T L C+ ++D + + + L L NL ++L ++D +L
Sbjct: 235 GLWSSLSARITSLSVSDCINVADDAIAA--ISQL--LPNLAELSLQAYHVTDTALAYFTA 290
Query: 249 --GLSSLKSLNLDARQITDTGLA-ALTSLTGLTHLDLFG-ARITDSGAAYL-RNFKNLRS 303
G S+ L +IT+ G+ + SL LT L L G +++TD G + N + LRS
Sbjct: 291 RQGHSTHTLRLLSCWEITNHGVVNVVHSLPNLTSLSLSGCSKVTDDGVELVAENLRKLRS 350
Query: 304 LEICGGG---------------------------LTDAGVKHIKDLSSLTLLNLSQNCNL 336
L++ +TD G+ ++ +SSL L L C +
Sbjct: 351 LDLSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQV 410
Query: 337 TDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 384
D GL+HL +++LR L+L C +
Sbjct: 411 QD------------------------FGLKHLLAMRSLRLLSLAGCPL 434
>sp|Q8N461|FXL16_HUMAN F-box/LRR-repeat protein 16 OS=Homo sapiens GN=FBXL16 PE=1 SV=2
Length = 479
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 123/251 (49%), Gaps = 25/251 (9%)
Query: 147 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV----NLTGL 202
G E F +G V +L E D + KG+ ++++L I D GL + G+
Sbjct: 167 GFEGFCLVG---VSDLDICEFIDNYALSKKGV---KAMSLKRSTITDAGLEVMLEQMQGV 220
Query: 203 CNLK---CLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 259
L+ C + ++ + SS ++ L+ + IN++ I+ ++ +L L +L L+L
Sbjct: 221 VRLELSGCNDFTEAGLWSSLSARITSLSVSDCINVADDAIA--AISQL--LPNLAELSLQ 276
Query: 260 ARQITDTGLAALTSLTGL-TH-LDLFGA-RITDSGAA-YLRNFKNLRSLEICG-GGLTDA 314
A +TDT LA T+ G TH L L IT+ G + + NL +L + G +TD
Sbjct: 277 AYHVTDTALAYFTARQGHSTHTLRLLSCWEITNHGVVNVVHSLPNLTALSLSGCSKVTDD 336
Query: 315 GVKHI-KDLSSLTLLNLSQNCNLTDKTLELIS-GLTGLVSLNVSNS-RITSAGLRHLKPL 371
GV+ + ++L L L+LS +TD LE ++ L L L + RIT GL +L +
Sbjct: 337 GVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGLSYLSTM 396
Query: 372 KNLRSLTLESC 382
+LRSL L C
Sbjct: 397 SSLRSLYLRWC 407
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 27/245 (11%)
Query: 5 LSGLSNLTSLSFRRNNAITAQGMKAF---------AGL-------INLVKLDLERCTRIH 48
L G+S+L F N A++ +G+KA AGL +V+L+L C
Sbjct: 173 LVGVSDLDICEFIDNYALSKKGVKAMSLKRSTITDAGLEVMLEQMQGVVRLELSGCNDFT 232
Query: 49 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGL-TNLKSLQISCSKVTDSGIAYL---K 104
+ ++ SL++ C + D + +S L NL L + VTD+ +AY +
Sbjct: 233 EAGLWSSLSARITSLSVSDCINVADDAIAAISQLLPNLAELSLQAYHVTDTALAYFTARQ 292
Query: 105 GLQKLTLLNLEGCPVT-AACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLN 161
G TL L +T ++ + +L +L L+L+ C +++DDG E ++ + L+ L+
Sbjct: 293 GHSTHTLRLLSCWEITNHGVVNVVHSLPNLTALSLSGCSKVTDDGVELVAENLRKLRSLD 352
Query: 162 LGF-NEITDECLVHLK-GLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGS 217
L + ITD L ++ L LE L LD C I D GL L+ + +L+ L L QV
Sbjct: 353 LSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQVQD 412
Query: 218 SGLRH 222
GL+H
Sbjct: 413 FGLKH 417
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 102/242 (42%), Gaps = 47/242 (19%)
Query: 137 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL-VHLKGLTNLESLNLDSC------ 189
+L+ C+ D+ SK G +K ++L + ITD L V L+ + + L L C
Sbjct: 178 DLDICEFIDN--YALSKKG-VKAMSLKRSTITDAGLEVMLEQMQGVVRLELSGCNDFTEA 234
Query: 190 GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA- 248
G+ +T L C+ ++D + + + L L NL ++L ++D +L
Sbjct: 235 GLWSSLSARITSLSVSDCINVADDAIAA--ISQL--LPNLAELSLQAYHVTDTALAYFTA 290
Query: 249 --GLSSLKSLNLDARQITDTGLA-ALTSLTGLTHLDLFG-ARITDSGAAYL-RNFKNLRS 303
G S+ L +IT+ G+ + SL LT L L G +++TD G + N + LRS
Sbjct: 291 RQGHSTHTLRLLSCWEITNHGVVNVVHSLPNLTALSLSGCSKVTDDGVELVAENLRKLRS 350
Query: 304 LEICGGG---------------------------LTDAGVKHIKDLSSLTLLNLSQNCNL 336
L++ +TD G+ ++ +SSL L L C +
Sbjct: 351 LDLSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQV 410
Query: 337 TD 338
D
Sbjct: 411 QD 412
>sp|Q9D486|CMIP_MOUSE C-Maf-inducing protein OS=Mus musculus GN=Cmip PE=2 SV=3
Length = 773
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Query: 154 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT-GLCNLKCLELSD 212
G+L+ L+L F +T C HL L +L+ LNL S GD GL L+ L L+ L L +
Sbjct: 661 FGNLENLSLAFTNVTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLCE 720
Query: 213 TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL-AGLSSLKSLNL 258
T V +GL LS + +L S+N++ T +S + L A L +LK +++
Sbjct: 721 TPVTDAGLLALSSMKSLCSLNMNSTKLSADTYEDLKAKLPNLKEVDV 767
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Query: 239 ISDGSLRKLAGLSSLKSLNLDAR---QITDTG--LAALTSLTGLTHLDLFGARITDSGAA 293
I D + +L +S+L+S ++ R Q+ D L L G T L L ++ TD+ A
Sbjct: 595 IIDNNDTQLQIISTLESTDVGKRMYEQLCDRQRELKELQRKGGPTRLTL-PSKSTDADLA 653
Query: 294 YLRN---FKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELIS-GLTG 349
L + F NL +L + +T A +H+ L SL LNL + D L L+S LT
Sbjct: 654 RLLSSGSFGNLENLSLAFTNVTSACAEHLIKLPSLKQLNL-WSTQFGDAGLRLLSEHLTM 712
Query: 350 LVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 400
L LN+ + +T AGL L +K+L SL + S K++A+ + L+++ LPNL
Sbjct: 713 LQVLNLCETPVTDAGLLALSSMKSLCSLNMNSTKLSADTYEDLKAK-LPNL 762
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 228 NLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS-LTGLTHLDLFGAR 286
NLE+++L+FT ++ L L SLK LNL + Q D GL L+ LT L L+L
Sbjct: 663 NLENLSLAFTNVTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLCETP 722
Query: 287 ITDSGAAYLRNFKNLRSLEI 306
+TD+G L + K+L SL +
Sbjct: 723 VTDAGLLALSSMKSLCSLNM 742
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 60 LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYL-KGLQKLTLLNLEGCP 118
LE+L++ + N +T + + L L +LK L + ++ D+G+ L + L L +LNL P
Sbjct: 664 LENLSLAFTN-VTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLCETP 722
Query: 119 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF-SKIGSLKVLNLGFNE 166
VT A L +LS++ SL LN+N +LS D E +K+ +LK +++ + E
Sbjct: 723 VTDAGLLALSSMKSLCSLNMNSTKLSADTYEDLKAKLPNLKEVDVRYTE 771
Score = 35.8 bits (81), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Query: 129 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-KGLTNLESLNLD 187
+ G+L L+L ++ E K+ SLK LNL + D L L + LT L+ LNL
Sbjct: 660 SFGNLENLSLAFTNVTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLC 719
Query: 188 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG-LTNLESINLSFT 237
+ D GL+ L+ + +L L ++ T++ + L L NL+ +++ +T
Sbjct: 720 ETPVTDAGLLALSSMKSLCSLNMNSTKLSADTYEDLKAKLPNLKEVDVRYT 770
>sp|Q8BH16|FBXL2_MOUSE F-box/LRR-repeat protein 2 OS=Mus musculus GN=Fbxl2 PE=1 SV=1
Length = 423
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 138/298 (46%), Gaps = 57/298 (19%)
Query: 60 LESLNIKWCNCITDSDMKPLSGL-TNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC 117
+E LN+ C ITDS LS + LK L + SC VT+S LKG+ EGC
Sbjct: 106 IEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSVTNSS---LKGIS-------EGC 155
Query: 118 PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLNL-GFNEITDECLVH 174
+L YLNL+ C Q++ +G E + LK L L G ++ DE L H
Sbjct: 156 R-------------NLEYLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLEDEALKH 202
Query: 175 LKGLTN-LESLNLDSCG-IGDEGLVN-------LTGLCNLKCLELSDTQVGSSGLRHLSG 225
++ + L SLNL SC I D+G+V L LC C L+D + + GL +
Sbjct: 203 IQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCLSGCSNLTDASLTALGL-NCPR 261
Query: 226 LTNLESINLSFTGISDGSLRKLA-GLSSLKSLNL-DARQITDTGLAALT------SLTGL 277
L LE+ S ++D LA L+ ++L + ITD+ L L+ L
Sbjct: 262 LQVLEAARCSH--LTDAGFTLLARNCHELEKMDLEECVLITDSTLVQLSIHCPKLQALSL 319
Query: 278 THLDLFGARITDSGAAYLRN----FKNLRSLEICGGGL-TDAGVKHIKDLSSLTLLNL 330
+H +L ITD G +L + + LR LE+ L TDA ++H+++ L L L
Sbjct: 320 SHCEL----ITDEGILHLSSSTCGHERLRVLELDNCLLVTDASLEHLENCRGLERLEL 373
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 166/366 (45%), Gaps = 63/366 (17%)
Query: 60 LESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEG 116
L L+++ C + DS +K + N++ L ++ C+K+TDS L + KL L+L
Sbjct: 80 LRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTS 139
Query: 117 C-PVTAACLDSLS-ALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLNL-GFNEITDEC 171
C VT + L +S +L YLNL+ C Q++ +G E + LK L L G ++ DE
Sbjct: 140 CVSVTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLEDEA 199
Query: 172 LVHLKGLTN-LESLNLDSCG-IGDEGLVNLTGLCN-LKCLELSDTQVGSSGLRHLSGLTN 228
L H++ + L SLNL SC I D+G+V + C+ L+ L LSG +N
Sbjct: 200 LKHIQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQAL-------------CLSGCSN 246
Query: 229 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFGAR- 286
L +L+ G++ L+ L +TD G L + L +DL
Sbjct: 247 LTDASLTALGLNCPRLQVLEAAR--------CSHLTDAGFTLLARNCHELEKMDLEECVL 298
Query: 287 ITDSGAAYLR-NFKNLRSLEICGGGL-TDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELI 344
ITDS L + L++L + L TD G+ H LSS T
Sbjct: 299 ITDSTLVQLSIHCPKLQALSLSHCELITDEGILH---LSSST------------------ 337
Query: 345 SGLTGLVSLNVSNSR-ITSAGLRHLKPLKNLRSLTLESC-KVTANDIKRLQSRDLPNL-- 400
G L L + N +T A L HL+ + L L L C +VT IKR++++ LP++
Sbjct: 338 CGHERLRVLELDNCLLVTDASLEHLENCRGLERLELYDCQQVTRAGIKRMRAQ-LPHVKV 396
Query: 401 -VSFRP 405
F P
Sbjct: 397 HAYFAP 402
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 127/302 (42%), Gaps = 68/302 (22%)
Query: 36 LVKLDLERCTRIHGGLVNLKGLMK----LESLNIKWCNCITDSDMKPL-SGLTNLKSLQI 90
L LDL C + +LKG+ + LE LN+ WC+ IT ++ L G LK+L +
Sbjct: 132 LKHLDLTSCVSVTNS--SLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLL 189
Query: 91 ---------------------------SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTA 121
SCS++TD G+ + +G +L L L GC +T
Sbjct: 190 RGCTQLEDEALKHIQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCLSGCSNLTD 249
Query: 122 ACLDSLSALGSLFYLNLNRCQLSDDG-CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 180
A SL+ALG LN R Q+ + C + + GF + C
Sbjct: 250 A---SLTALG----LNCPRLQVLEAARCSHLT--------DAGFTLLARNC-------HE 287
Query: 181 LESLNLDSCG-IGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHLS----GLTNLESIN 233
LE ++L+ C I D LV L+ C L+ L LS + + G+ HLS G L +
Sbjct: 288 LEKMDLEECVLITDSTLVQLSIHCPKLQALSLSHCELITDEGILHLSSSTCGHERLRVLE 347
Query: 234 L-SFTGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSG 291
L + ++D SL L L+ L L D +Q+T G+ + + + + A +T
Sbjct: 348 LDNCLLVTDASLEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYFAPVTPPP 407
Query: 292 AA 293
A
Sbjct: 408 AV 409
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 18/201 (8%)
Query: 5 LSGLSNLTSLSFRRNNAITAQGMKAFAGLIN-LVKLDLERCTRI-HGGLVNL-KGLMKLE 61
+ G L +L R + + +K + LV L+L+ C+RI G+V + +G +L+
Sbjct: 178 VRGCRGLKALLLRGCTQLEDEALKHIQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQ 237
Query: 62 SLNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYL-KGLQKLTLLNLEG 116
+L + C+ +TD+ + L GL N LQ+ CS +TD+G L + +L ++LE
Sbjct: 238 ALCLSGCSNLTDASLTAL-GL-NCPRLQVLEAARCSHLTDAGFTLLARNCHELEKMDLEE 295
Query: 117 CP-VTAACLDSLS-ALGSLFYLNLNRCQL-SDDGCEKFSK--IGSLKVLNLGFNE---IT 168
C +T + L LS L L+L+ C+L +D+G S G ++ L + +T
Sbjct: 296 CVLITDSTLVQLSIHCPKLQALSLSHCELITDEGILHLSSSTCGHERLRVLELDNCLLVT 355
Query: 169 DECLVHLKGLTNLESLNLDSC 189
D L HL+ LE L L C
Sbjct: 356 DASLEHLENCRGLERLELYDC 376
>sp|A6H779|FBXL2_BOVIN F-box/LRR-repeat protein 2 OS=Bos taurus GN=FBXL2 PE=2 SV=1
Length = 423
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 160/374 (42%), Gaps = 79/374 (21%)
Query: 60 LESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEG 116
L L+++ C + DS +K + N++ L ++ C+K+TDS L + KL L+L
Sbjct: 80 LRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTS 139
Query: 117 C-PVTAACLDSLS-ALGSLFYLNLNRC-QLSDDGCEKFSK--IGSLKVLNLGFNEITDEC 171
C +T + L +S L YLNL+ C Q++ DG E + G +L G ++ DE
Sbjct: 140 CVSITNSSLKGISEGCRHLEYLNLSWCDQITKDGVEALVRGCRGLRALLLRGCTQLEDEA 199
Query: 172 LVHLKGLTN-LESLNLDSCG-IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 229
L H++ + L SLNL SC + D+G+V L G L
Sbjct: 200 LKHIQNYCHELVSLNLQSCSRVTDDGVVQLC-----------------------RGCPRL 236
Query: 230 ESINLSFTG-ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 288
+++ LS G ++D SL LA LN QI + + +T
Sbjct: 237 QALCLSGCGSLTDASLTALA-------LNCPRLQILEAARCS---------------HLT 274
Query: 289 DSGAAYL-RNFKNLRSLE------ICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLT--DK 339
D+G L RN +L ++ I LT + H L +L+L +C L D
Sbjct: 275 DAGFTLLARNCHDLEKMDLEECILITDRTLTQLSI-HCPKLQALSL----SHCELITDDG 329
Query: 340 TLELISGLTGLVSLNVSNSR----ITSAGLRHLKPLKNLRSLTLESC-KVTANDIKRLQS 394
L L + G L V IT L HL+ + L L L C +VT IKR+++
Sbjct: 330 ILHLSNSPCGHERLRVLELDNCLLITDVALEHLEHCRGLERLELYDCQQVTRAGIKRMRA 389
Query: 395 RDLPNL---VSFRP 405
+ LP++ F P
Sbjct: 390 Q-LPHVRVHAYFAP 402
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 127/302 (42%), Gaps = 68/302 (22%)
Query: 36 LVKLDLERCTRIHGGLVNLKGLMK----LESLNIKWCNCITDSDMKPL-SGLTNLKSLQI 90
L LDL C I +LKG+ + LE LN+ WC+ IT ++ L G L++L +
Sbjct: 132 LKHLDLTSCVSITNS--SLKGISEGCRHLEYLNLSWCDQITKDGVEALVRGCRGLRALLL 189
Query: 91 ---------------------------SCSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTA 121
SCS+VTD G+ L +G +L L L GC +T
Sbjct: 190 RGCTQLEDEALKHIQNYCHELVSLNLQSCSRVTDDGVVQLCRGCPRLQALCLSGCGSLTD 249
Query: 122 ACLDSLSALGSLFYLNLNRCQLSDDG-CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 180
A SL+AL LN R Q+ + C + + GF + C +
Sbjct: 250 A---SLTALA----LNCPRLQILEAARCSHLT--------DAGFTLLARNC-------HD 287
Query: 181 LESLNLDSCG-IGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHLS----GLTNLESIN 233
LE ++L+ C I D L L+ C L+ L LS + + G+ HLS G L +
Sbjct: 288 LEKMDLEECILITDRTLTQLSIHCPKLQALSLSHCELITDDGILHLSNSPCGHERLRVLE 347
Query: 234 L-SFTGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSG 291
L + I+D +L L L+ L L D +Q+T G+ + + + + A +T
Sbjct: 348 LDNCLLITDVALEHLEHCRGLERLELYDCQQVTRAGIKRMRAQLPHVRVHAYFAPVTPPT 407
Query: 292 AA 293
AA
Sbjct: 408 AA 409
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 18/201 (8%)
Query: 5 LSGLSNLTSLSFRRNNAITAQGMKAFAGLIN-LVKLDLERCTRI-HGGLVNL-KGLMKLE 61
+ G L +L R + + +K + LV L+L+ C+R+ G+V L +G +L+
Sbjct: 178 VRGCRGLRALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRVTDDGVVQLCRGCPRLQ 237
Query: 62 SLNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYL-KGLQKLTLLNLEG 116
+L + C +TD+ + L+ N LQI CS +TD+G L + L ++LE
Sbjct: 238 ALCLSGCGSLTDASLTALA--LNCPRLQILEAARCSHLTDAGFTLLARNCHDLEKMDLEE 295
Query: 117 CP-VTAACLDSLS-ALGSLFYLNLNRCQL-SDDGCEKFS--KIGSLKVLNLGFNE---IT 168
C +T L LS L L+L+ C+L +DDG S G ++ L + IT
Sbjct: 296 CILITDRTLTQLSIHCPKLQALSLSHCELITDDGILHLSNSPCGHERLRVLELDNCLLIT 355
Query: 169 DECLVHLKGLTNLESLNLDSC 189
D L HL+ LE L L C
Sbjct: 356 DVALEHLEHCRGLERLELYDC 376
>sp|A0N0X6|LRRN1_BOVIN Leucine-rich repeat neuronal protein 1 OS=Bos taurus GN=LRRN1 PE=3
SV=1
Length = 716
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 144/343 (41%), Gaps = 38/343 (11%)
Query: 43 RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAY 102
R TRI L + ++ L+S NI T +++ L LT L Q + + + + G+A
Sbjct: 62 RLTRIPSNLSSDTQVLLLQSNNI----AKTVDELQQLFNLTELDFSQNNFTNIKEVGLA- 116
Query: 103 LKGLQKLTLLNLEGCPVTA---ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV 159
L +LT L+LE +T CL LS L L+ +N Q+S FS + +L
Sbjct: 117 --NLTQLTTLHLEENQITEMNDYCLQDLSNLQELY---INHNQISTISANAFSGLKNLLR 171
Query: 160 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG 219
L+L N+ L ++S DS NL+ L + + V
Sbjct: 172 LHLNSNK-----------LKVIDSRWFDSTP-------------NLEILMIGENPVIGIL 207
Query: 220 LRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTH 279
+ L+NL S+ L+ ++D L GL SL+SL+ ++ AL + L
Sbjct: 208 DMNFKPLSNLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLVKVPQLALQKVPNLKF 267
Query: 280 LDLFGARITDSGAAYLRNFKNLRSLEICG-GGLTDAGVKHIKDLSSLTLLNLSQNCNLTD 338
LDL I +N L+ L I G L + +L LT L + N L+
Sbjct: 268 LDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLSY 327
Query: 339 KTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 381
+ L SL ++N+ + + + ++ L NLR +++ S
Sbjct: 328 IHRLAFRSVPALESLMLNNNALNAVYQKTVESLPNLREISIHS 370
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 13/286 (4%)
Query: 121 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 180
A +D L L +L L+ ++ ++ + + L L+L N+IT+ L+ L+N
Sbjct: 85 AKTVDELQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQITEMNDYCLQDLSN 144
Query: 181 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL---SFT 237
L+ L ++ I +GL NL L L+ ++ R NLE + +
Sbjct: 145 LQELYINHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVI 204
Query: 238 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 297
GI D + + LS+L+SL L +TD AL L L L + ++ L+
Sbjct: 205 GILDMNFK---PLSNLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLVKVPQLALQK 261
Query: 298 FKNLRSLEICGGG---LTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLN 354
NL+ L++ + + K++ L L + N+ + ++ L+ + LT L + N
Sbjct: 262 VPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATN 321
Query: 355 VSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 400
N +++ + + L SL L + + A K ++S LPNL
Sbjct: 322 --NPKLSYIHRLAFRSVPALESLMLNNNALNAVYQKTVES--LPNL 363
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 103/256 (40%), Gaps = 7/256 (2%)
Query: 3 ENLSGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLES 62
+ L L NLT L F +NN + + A L L L LE L+ L L+
Sbjct: 89 DELQQLFNLTELDFSQNNFTNIKEV-GLANLTQLTTLHLEENQITEMNDYCLQDLSNLQE 147
Query: 63 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 122
L I N I+ SGL NL L ++ +K+ + L +L + PV
Sbjct: 148 LYIN-HNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGI 206
Query: 123 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 182
+ L +L L L L+D + SL+ L+ N++ + L+ + NL+
Sbjct: 207 LDMNFKPLSNLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLVKVPQLALQKVPNLK 266
Query: 183 SLNLDSCGIGDEGLVNLTGLCNLKCLELSD----TQVGSSGLRHLSGLTNLESI-NLSFT 237
L+L+ I + + LK L +++ V L +L LT LE+ N +
Sbjct: 267 FLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLS 326
Query: 238 GISDGSLRKLAGLSSL 253
I + R + L SL
Sbjct: 327 YIHRLAFRSVPALESL 342
>sp|Q8IY22|CMIP_HUMAN C-Maf-inducing protein OS=Homo sapiens GN=CMIP PE=1 SV=3
Length = 773
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Query: 154 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT-GLCNLKCLELSD 212
G+L+ L+L F +T C HL L +L+ LNL S GD GL L+ L L+ L L +
Sbjct: 661 FGNLENLSLAFTNVTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLCE 720
Query: 213 TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL-AGLSSLKSLNL 258
T V +GL LS + +L S+N++ T +S + L A L +LK +++
Sbjct: 721 TPVTDAGLLALSSMKSLCSLNMNSTKLSADTYEDLKAKLPNLKEVDV 767
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 72/135 (53%), Gaps = 10/135 (7%)
Query: 267 GLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLT 326
G LT + T DL AR+ SG+ F NL +L + +T A +H+ L SL
Sbjct: 637 GPTRLTLPSKSTDADL--ARLLSSGS-----FGNLENLSLAFTNVTSACAEHLIKLPSLK 689
Query: 327 LLNLSQNCNLTDKTLELIS-GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 385
LNL + D L L+S LT L LN+ + +T AGL L +K+L SL + S K++
Sbjct: 690 QLNL-WSTQFGDAGLRLLSEHLTMLQVLNLCETPVTDAGLLALSSMKSLCSLNMNSTKLS 748
Query: 386 ANDIKRLQSRDLPNL 400
A+ + L+++ LPNL
Sbjct: 749 ADTYEDLKAK-LPNL 762
Score = 45.1 bits (105), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 228 NLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS-LTGLTHLDLFGAR 286
NLE+++L+FT ++ L L SLK LNL + Q D GL L+ LT L L+L
Sbjct: 663 NLENLSLAFTNVTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLCETP 722
Query: 287 ITDSGAAYLRNFKNLRSLEI 306
+TD+G L + K+L SL +
Sbjct: 723 VTDAGLLALSSMKSLCSLNM 742
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 60 LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYL-KGLQKLTLLNLEGCP 118
LE+L++ + N +T + + L L +LK L + ++ D+G+ L + L L +LNL P
Sbjct: 664 LENLSLAFTN-VTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLCETP 722
Query: 119 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF-SKIGSLKVLNLGFNE 166
VT A L +LS++ SL LN+N +LS D E +K+ +LK +++ + E
Sbjct: 723 VTDAGLLALSSMKSLCSLNMNSTKLSADTYEDLKAKLPNLKEVDVRYTE 771
Score = 35.4 bits (80), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Query: 129 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-KGLTNLESLNLD 187
+ G+L L+L ++ E K+ SLK LNL + D L L + LT L+ LNL
Sbjct: 660 SFGNLENLSLAFTNVTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLC 719
Query: 188 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG-LTNLESINLSFT 237
+ D GL+ L+ + +L L ++ T++ + L L NL+ +++ +T
Sbjct: 720 ETPVTDAGLLALSSMKSLCSLNMNSTKLSADTYEDLKAKLPNLKEVDVRYT 770
>sp|Q8R5M3|LRC15_RAT Leucine-rich repeat-containing protein 15 OS=Rattus norvegicus
GN=Lrrc15 PE=2 SV=1
Length = 578
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 141/364 (38%), Gaps = 36/364 (9%)
Query: 19 NNAITAQGMKAFAGLINLVKLDLER---CTRIHGGLVNLKGLMKLESLNIKWCNCITDSD 75
N IT F + L+ L +E+ T + G NL L L N N +
Sbjct: 62 NTHITELPENLFLNISALIALKMEKNELSTIMPGAFRNLGSLRYLSLAN----NKLRMLP 117
Query: 76 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 135
++ + NL+SL +S +++ A L L L G + + ++ L L
Sbjct: 118 IRVFQDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTK 177
Query: 136 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG--D 193
LNL R + F +G+L+VL L N ++D + L NL+ L L IG
Sbjct: 178 LNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQENQIGTLS 237
Query: 194 EGLVNLTGLCNLKCLELSDTQVGS-------------------SGLRHLS-----GLTNL 229
GL + NL+ L LS+ + + LR LS + NL
Sbjct: 238 PGLFHNNR--NLQRLYLSNNHISQLPPGIFMQLPQLNKLTLFGNSLRELSPGVFGPMPNL 295
Query: 230 ESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 289
+ L I+ + + L+ L+ L L Q+T A LT L L L + D
Sbjct: 296 RELWLYNNHITSLADNTFSHLNQLQVLILSHNQLTYISPGAFNGLTNLRELSLHTNALQD 355
Query: 290 SGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTG 349
+ R+ NL+++ + L +++ LT + L QN NL + L + L
Sbjct: 356 LDSNVFRSLANLQNISLQSNRLRQLPGSIFANVNGLTTIQL-QNNNLENLPLGIFDHLVN 414
Query: 350 LVSL 353
L L
Sbjct: 415 LCEL 418
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 132/330 (40%), Gaps = 35/330 (10%)
Query: 84 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 143
N SLQ+ + +T+ + L L +E ++ + LGSL YL+L +L
Sbjct: 54 NAMSLQVVNTHITELPENLFLNISALIALKMEKNELSTIMPGAFRNLGSLRYLSLANNKL 113
Query: 144 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL-----NLDSCGIGDEGLVN 198
F + +L+ L L N++ +NL L NL+S I +E +
Sbjct: 114 RMLPIRVFQDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLES--IPEEAFDH 171
Query: 199 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD---------GSLRKLA- 248
L GL L S T + +HL NL+ + L +SD G+L++LA
Sbjct: 172 LVGLTKLNLGRNSFTHLSPRLFQHLG---NLQVLRLHENRLSDIPMGTFDALGNLQELAL 228
Query: 249 ----------GL----SSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 294
GL +L+ L L I+ L L L LFG + +
Sbjct: 229 QENQIGTLSPGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLNKLTLFGNSLRELSPGV 288
Query: 295 LRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLN 354
NLR L + +T L+ L +L LS N LT + +GLT L L+
Sbjct: 289 FGPMPNLRELWLYNNHITSLADNTFSHLNQLQVLILSHN-QLTYISPGAFNGLTNLRELS 347
Query: 355 VSNSRITSAGLRHLKPLKNLRSLTLESCKV 384
+ + + + L NL++++L+S ++
Sbjct: 348 LHTNALQDLDSNVFRSLANLQNISLQSNRL 377
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 5/187 (2%)
Query: 203 CNLKCLELSDTQVGSSGLRHLSGLTNLE----SINLSFTGISDGSLRKLAGLSSLKSLNL 258
C +C +QV +G R ++ T L S+ + T I++ +S+L +L +
Sbjct: 25 CPSECTCSRASQVECTGARIVAMPTPLPWNAMSLQVVNTHITELPENLFLNISALIALKM 84
Query: 259 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKH 318
+ +++ A +L L +L L ++ ++ NL SL + L
Sbjct: 85 EKNELSTIMPGAFRNLGSLRYLSLANNKLRMLPIRVFQDVNNLESLLLSNNQLVQIQPAQ 144
Query: 319 IKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 378
S+L L L N NL E L GL LN+ + T R + L NL+ L
Sbjct: 145 FSQFSNLRELQLHGN-NLESIPEEAFDHLVGLTKLNLGRNSFTHLSPRLFQHLGNLQVLR 203
Query: 379 LESCKVT 385
L +++
Sbjct: 204 LHENRLS 210
>sp|Q65Z91|TSK_CHICK Tsukushin OS=Gallus gallus GN=TSKU PE=1 SV=1
Length = 369
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 26/173 (15%)
Query: 208 LELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTG 267
++LS+ + H + N++++NLS ++ S+ L G+ L+ LNLD +
Sbjct: 164 VDLSNNMLSKITRNHEKSIPNIQNLNLSGNRLT--SVPNLQGIP-LRYLNLDGNPLAKIE 220
Query: 268 LAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTL 327
L GL HL L G L +F+ L K+L +L +
Sbjct: 221 KGDFKGLKGLIHLSLSG----------LHDFRELSPYSF-------------KELPALQV 257
Query: 328 LNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 380
L+LS N NL T E+I GL + LN+S + ++S LK L +L+S+TL
Sbjct: 258 LDLSNNPNLRSLTAEVIFGLNSIQELNLSGTGVSSLPKTVLKYLPSLKSITLR 310
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,351,110
Number of Sequences: 539616
Number of extensions: 5239544
Number of successful extensions: 16397
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 267
Number of HSP's successfully gapped in prelim test: 531
Number of HSP's that attempted gapping in prelim test: 12572
Number of HSP's gapped (non-prelim): 2616
length of query: 406
length of database: 191,569,459
effective HSP length: 120
effective length of query: 286
effective length of database: 126,815,539
effective search space: 36269244154
effective search space used: 36269244154
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)