Query 015458
Match_columns 406
No_of_seqs 395 out of 1958
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 06:30:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015458.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015458hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02370 acyl-ACP thioesterase 100.0 2.1E-69 4.5E-74 550.4 32.2 311 50-400 94-405 (419)
2 PF01643 Acyl-ACP_TE: Acyl-ACP 100.0 1.9E-53 4.2E-58 412.3 24.7 255 100-397 1-261 (261)
3 COG3884 FatA Acyl-ACP thioeste 100.0 3.8E-34 8.3E-39 266.4 16.1 216 101-331 2-220 (250)
4 PRK10800 acyl-CoA thioesterase 99.9 3E-25 6.5E-30 192.4 17.0 128 102-236 2-129 (130)
5 TIGR02799 thio_ybgC tol-pal sy 99.9 2.5E-23 5.3E-28 178.3 15.5 124 103-234 1-125 (126)
6 TIGR00051 acyl-CoA thioester h 99.9 1.1E-22 2.4E-27 171.1 14.6 117 106-229 1-117 (117)
7 COG0824 FcbC Predicted thioest 99.9 3E-22 6.5E-27 176.6 16.1 131 100-238 3-133 (137)
8 PRK07531 bifunctional 3-hydrox 99.8 4.1E-19 9E-24 186.8 16.5 133 99-239 342-474 (495)
9 PF13279 4HBT_2: Thioesterase- 99.8 1E-18 2.2E-23 148.8 15.8 119 109-236 1-121 (121)
10 cd00586 4HBT 4-hydroxybenzoyl- 99.7 8.4E-16 1.8E-20 125.4 14.0 110 103-219 1-110 (110)
11 COG0824 FcbC Predicted thioest 99.4 1.9E-12 4.1E-17 114.3 9.7 69 266-335 8-90 (137)
12 PRK10800 acyl-CoA thioesterase 99.4 3.7E-12 8.1E-17 110.3 9.7 67 266-332 5-84 (130)
13 TIGR02799 thio_ybgC tol-pal sy 99.3 1.4E-11 3E-16 105.4 10.0 67 266-332 3-83 (126)
14 TIGR00051 acyl-CoA thioester h 99.3 2.1E-11 4.5E-16 102.4 10.7 66 267-332 1-79 (117)
15 PF13279 4HBT_2: Thioesterase- 99.3 9.9E-12 2.1E-16 105.7 8.2 60 270-331 1-73 (121)
16 cd03442 BFIT_BACH Brown fat-in 99.3 2.5E-10 5.5E-15 96.4 15.5 113 101-229 6-123 (123)
17 cd00586 4HBT 4-hydroxybenzoyl- 99.0 2.3E-09 4.9E-14 87.2 9.4 65 266-330 3-80 (110)
18 cd03440 hot_dog The hotdog fol 98.8 1.2E-07 2.5E-12 72.3 13.5 98 104-215 2-99 (100)
19 PRK07531 bifunctional 3-hydrox 98.8 1.3E-08 2.8E-13 107.6 10.5 68 266-333 348-427 (495)
20 PF03061 4HBT: Thioesterase su 98.7 5.7E-07 1.2E-11 69.9 12.4 79 117-209 1-79 (79)
21 PF01643 Acyl-ACP_TE: Acyl-ACP 98.6 2.2E-07 4.8E-12 90.4 9.5 129 65-215 112-259 (261)
22 cd03443 PaaI_thioesterase PaaI 98.5 4E-06 8.8E-11 69.6 14.4 100 102-216 13-112 (113)
23 PLN02370 acyl-ACP thioesterase 98.4 1.8E-06 3.9E-11 89.3 9.8 134 64-217 247-402 (419)
24 PRK10694 acyl-CoA esterase; Pr 98.1 8.8E-05 1.9E-09 65.3 14.6 111 104-230 13-131 (133)
25 cd03440 hot_dog The hotdog fol 98.0 4.2E-05 9.2E-10 57.8 9.3 65 267-331 4-74 (100)
26 cd03442 BFIT_BACH Brown fat-in 98.0 6.1E-05 1.3E-09 63.3 10.3 66 266-331 10-80 (123)
27 PF12590 Acyl-thio_N: Acyl-ATP 97.9 1.3E-06 2.9E-11 74.8 -1.4 34 49-89 96-129 (129)
28 PLN02647 acyl-CoA thioesterase 97.9 0.0019 4.1E-08 67.5 20.4 217 108-331 99-363 (437)
29 COG1607 Acyl-CoA hydrolase [Li 97.6 0.0021 4.7E-08 58.2 14.5 113 105-232 16-132 (157)
30 TIGR00369 unchar_dom_1 unchara 97.5 0.0034 7.4E-08 53.2 14.1 98 104-216 19-116 (117)
31 COG3884 FatA Acyl-ACP thioeste 97.5 0.00039 8.4E-09 66.2 8.1 88 102-215 152-239 (250)
32 PF03061 4HBT: Thioesterase su 97.5 0.00017 3.8E-09 55.8 4.9 57 278-334 1-63 (79)
33 TIGR02286 PaaD phenylacetic ac 97.3 0.011 2.5E-07 49.8 14.6 97 104-217 17-113 (114)
34 cd03443 PaaI_thioesterase PaaI 97.0 0.0078 1.7E-07 49.7 10.0 66 265-331 15-86 (113)
35 PRK10293 acyl-CoA esterase; Pr 96.7 0.084 1.8E-06 46.6 14.4 100 104-218 37-136 (136)
36 PRK11688 hypothetical protein; 96.5 0.1 2.2E-06 46.7 14.1 110 104-217 40-153 (154)
37 PRK10254 thioesterase; Provisi 96.4 0.22 4.8E-06 44.0 15.4 100 104-218 37-136 (137)
38 COG2050 PaaI HGG motif-contain 96.2 0.18 3.9E-06 44.3 13.9 104 103-220 36-139 (141)
39 COG5496 Predicted thioesterase 96.2 0.21 4.6E-06 43.6 13.6 110 98-222 2-118 (130)
40 KOG3328 HGG motif-containing t 95.7 0.13 2.8E-06 46.0 10.6 100 104-217 40-139 (148)
41 cd03449 R_hydratase (R)-hydrat 95.4 0.21 4.6E-06 42.1 10.5 56 159-215 69-126 (128)
42 PLN02322 acyl-CoA thioesterase 94.7 1.5 3.3E-05 39.6 14.6 102 104-219 29-135 (154)
43 PF14539 DUF4442: Domain of un 93.6 1.7 3.6E-05 37.9 12.1 99 102-216 30-131 (132)
44 PLN02647 acyl-CoA thioesterase 93.3 2.1 4.6E-05 45.0 14.4 115 103-231 291-415 (437)
45 cd00556 Thioesterase_II Thioes 92.9 0.68 1.5E-05 37.1 8.1 58 158-216 41-98 (99)
46 cd03455 SAV4209 SAV4209 is a S 92.4 1.1 2.3E-05 38.2 9.1 55 160-215 67-122 (123)
47 cd01288 FabZ FabZ is a 17kD be 91.9 1.6 3.5E-05 37.0 9.6 59 157-217 72-130 (131)
48 PRK13691 (3R)-hydroxyacyl-ACP 91.8 2.6 5.5E-05 38.5 11.3 61 161-222 85-149 (166)
49 COG4109 Predicted transcriptio 91.5 1 2.3E-05 45.9 8.9 104 95-215 325-428 (432)
50 cd03447 FAS_MaoC FAS_MaoC, the 91.5 1.9 4.2E-05 37.3 9.6 53 162-214 70-122 (126)
51 cd03441 R_hydratase_like (R)-h 90.7 2.5 5.5E-05 35.2 9.6 56 158-214 66-125 (127)
52 TIGR01750 fabZ beta-hydroxyacy 90.4 11 0.00024 32.6 14.3 86 120-216 53-139 (140)
53 PRK13692 (3R)-hydroxyacyl-ACP 90.1 3.9 8.4E-05 37.0 10.7 60 163-223 87-150 (159)
54 cd03454 YdeM YdeM is a Bacillu 90.0 1.7 3.7E-05 37.6 8.1 51 165-216 81-138 (140)
55 cd03446 MaoC_like MoaC_like 89.6 2.1 4.7E-05 36.8 8.4 51 165-216 83-139 (140)
56 cd03453 SAV4209_like SAV4209_l 89.2 3 6.6E-05 35.6 8.9 52 162-214 70-125 (127)
57 PRK04424 fatty acid biosynthes 88.4 5.3 0.00012 37.0 10.5 59 157-217 123-181 (185)
58 cd03451 FkbR2 FkbR2 is a Strep 88.0 2.8 6.2E-05 36.3 8.1 52 165-217 84-142 (146)
59 PRK00006 fabZ (3R)-hydroxymyri 87.6 18 0.0004 31.5 16.3 59 159-219 87-146 (147)
60 cd03445 Thioesterase_II_repeat 84.5 7.5 0.00016 31.8 8.4 52 162-215 41-92 (94)
61 PF13452 MaoC_dehydrat_N: N-te 84.4 3.7 8E-05 35.0 6.8 52 158-210 73-131 (132)
62 PRK08190 bifunctional enoyl-Co 84.3 7.6 0.00017 41.1 10.4 66 159-225 82-149 (466)
63 PF13622 4HBT_3: Thioesterase- 84.2 7.6 0.00016 36.9 9.6 58 160-220 34-91 (255)
64 TIGR02286 PaaD phenylacetic ac 84.1 11 0.00025 31.4 9.6 65 266-330 18-85 (114)
65 cd03452 MaoC_C MaoC_C The C-t 82.9 6.7 0.00015 34.3 7.9 52 165-217 81-138 (142)
66 PLN02864 enoyl-CoA hydratase 82.4 7.1 0.00015 39.2 8.8 58 162-219 96-157 (310)
67 PRK10694 acyl-CoA esterase; Pr 82.0 3.6 7.8E-05 36.1 5.9 69 267-335 15-88 (133)
68 TIGR02447 yiiD_Cterm thioester 81.1 37 0.00081 29.7 13.3 100 104-218 25-137 (138)
69 cd00493 FabA_FabZ FabA/Z, beta 79.0 37 0.00079 28.3 14.9 85 118-212 42-126 (131)
70 KOG4366 Predicted thioesterase 77.0 0.82 1.8E-05 42.6 0.2 99 112-219 60-161 (213)
71 PF03756 AfsA: A-factor biosyn 73.7 28 0.00061 29.8 9.0 59 157-217 69-132 (132)
72 KOG4366 Predicted thioesterase 72.5 1.2 2.6E-05 41.4 0.1 56 272-327 59-127 (213)
73 PRK11688 hypothetical protein; 72.4 21 0.00045 31.7 8.1 65 266-331 41-126 (154)
74 TIGR00369 unchar_dom_1 unchara 68.1 62 0.0014 26.8 9.7 66 265-331 19-90 (117)
75 TIGR00189 tesB acyl-CoA thioes 66.9 21 0.00045 34.5 7.4 53 162-216 46-98 (271)
76 cd03453 SAV4209_like SAV4209_l 62.7 53 0.0011 27.8 8.4 27 303-329 69-95 (127)
77 cd03449 R_hydratase (R)-hydrat 60.6 53 0.0011 27.2 7.9 26 304-329 72-97 (128)
78 COG1607 Acyl-CoA hydrolase [Li 57.6 28 0.00061 31.7 5.9 71 267-337 17-92 (157)
79 PRK13188 bifunctional UDP-3-O- 57.1 1E+02 0.0022 32.9 10.8 60 158-219 401-461 (464)
80 cd03444 Thioesterase_II_repeat 55.1 84 0.0018 26.0 8.1 56 160-216 48-103 (104)
81 cd03448 HDE_HSD HDE_HSD The R 54.4 69 0.0015 27.4 7.6 46 161-211 71-116 (122)
82 PF07977 FabA: FabA-like domai 54.1 1.1E+02 0.0025 26.2 9.1 86 119-212 49-138 (138)
83 PF01575 MaoC_dehydratas: MaoC 51.3 34 0.00073 28.9 5.2 32 158-189 74-105 (122)
84 PRK10526 acyl-CoA thioesterase 51.1 60 0.0013 32.0 7.6 54 161-216 56-109 (286)
85 cd01289 FabA_like Domain of un 50.2 1.7E+02 0.0037 25.4 12.0 88 118-215 45-134 (138)
86 cd03455 SAV4209 SAV4209 is a S 49.9 1.3E+02 0.0028 25.2 8.6 28 302-329 67-94 (123)
87 COG2030 MaoC Acyl dehydratase 48.4 1E+02 0.0022 27.6 8.0 59 159-218 93-155 (159)
88 cd03441 R_hydratase_like (R)-h 42.8 53 0.0012 27.0 5.1 29 302-330 68-96 (127)
89 cd01287 FabA FabA, beta-hydrox 40.4 2.6E+02 0.0056 24.9 9.3 59 158-218 84-147 (150)
90 PF09500 YiiD_Cterm: Putative 39.9 2.1E+02 0.0045 25.6 8.5 91 113-218 39-143 (144)
91 COG0764 FabA 3-hydroxymyristoy 37.3 3.1E+02 0.0067 24.6 10.1 61 158-220 85-146 (147)
92 PF13622 4HBT_3: Thioesterase- 37.0 2.7E+02 0.0059 26.1 9.6 54 162-216 200-254 (255)
93 cd03446 MaoC_like MoaC_like 36.9 1.5E+02 0.0033 25.1 7.1 23 308-330 84-106 (140)
94 COG4109 Predicted transcriptio 36.7 63 0.0014 33.4 5.2 66 268-333 337-406 (432)
95 TIGR02278 PaaN-DH phenylacetic 33.9 1.2E+02 0.0026 33.8 7.3 51 165-216 604-660 (663)
96 PRK13692 (3R)-hydroxyacyl-ACP 33.2 1.8E+02 0.0038 26.2 7.1 24 306-329 88-111 (159)
97 COG2050 PaaI HGG motif-contain 33.0 1.7E+02 0.0038 25.2 6.9 65 267-332 39-109 (141)
98 PF02551 Acyl_CoA_thio: Acyl-C 32.7 2.8E+02 0.006 24.6 7.9 53 162-215 77-130 (131)
99 TIGR00189 tesB acyl-CoA thioes 31.7 2.3E+02 0.005 27.1 8.2 54 161-216 215-269 (271)
100 PRK11563 bifunctional aldehyde 31.6 1.4E+02 0.0031 33.2 7.5 49 166-215 617-671 (675)
101 PLN02864 enoyl-CoA hydratase 31.5 2E+02 0.0043 28.9 7.8 51 160-215 253-303 (310)
102 PF01575 MaoC_dehydratas: MaoC 30.9 70 0.0015 26.9 3.9 51 277-329 53-103 (122)
103 cd03450 NodN NodN (nodulation 29.5 4E+02 0.0086 23.6 9.6 30 159-188 84-113 (149)
104 cd03447 FAS_MaoC FAS_MaoC, the 29.4 3.6E+02 0.0078 23.0 8.5 27 303-329 69-95 (126)
105 PLN02868 acyl-CoA thioesterase 28.9 1.6E+02 0.0034 30.5 6.9 54 162-217 183-236 (413)
106 COG1946 TesB Acyl-CoA thioeste 28.5 6.2E+02 0.013 25.4 11.0 105 105-218 178-283 (289)
107 PF11456 DUF3019: Protein of u 24.7 1.9E+02 0.004 24.3 5.3 34 196-229 66-99 (102)
108 cd03452 MaoC_C MaoC_C The C-t 22.6 2.7E+02 0.0058 24.1 6.2 23 307-329 81-103 (142)
109 PRK10526 acyl-CoA thioesterase 21.8 4.3E+02 0.0094 25.9 8.2 56 160-217 226-282 (286)
110 PRK13693 (3R)-hydroxyacyl-ACP 21.4 5.5E+02 0.012 22.4 9.3 52 163-215 81-139 (142)
111 cd03448 HDE_HSD HDE_HSD The R 21.2 1.5E+02 0.0034 25.2 4.3 27 303-329 71-97 (122)
No 1
>PLN02370 acyl-ACP thioesterase
Probab=100.00 E-value=2.1e-69 Score=550.41 Aligned_cols=311 Identities=50% Similarity=0.878 Sum_probs=273.3
Q ss_pred cccccceeeeehhhhhhccccccchhhccccCCCcccccccccccceecCceeEEEEEEeeecCCCCCCCcCHHHHHHHH
Q 015458 50 SQTTGVASTFVASVAAEKEGCRINEVQIRQNIPTKKQFVDPYRHGLIIEGGVGYRQTVVVRSYEVGPDKTATLESILNLF 129 (406)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~f~~~~~VR~~E~D~~G~v~~~~yl~yl 129 (406)
||...++||||. ||||||+++||++.|+ ++|+|+|++|++|+||++|+++|+|||||||++|++++..+++||
T Consensus 94 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~y~~~f~Ir~yEvD~~g~lsl~~L~n~l 166 (419)
T PLN02370 94 SMLLAAITTIFL--AAEKQWMMLDWKPRRS-----DMLIDPFGIGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHL 166 (419)
T ss_pred HHHHHHHHHHHH--hhhhhhhhhcccCCCC-----cccccccccCceeccCcEEEEEEEEeeEEECCCCCCCHHHHHHHH
Confidence 677889999998 9999999999999998 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEEEEEEeeeCCcEEEEEEEEEecCCCcEEE
Q 015458 130 QETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFA 209 (406)
Q Consensus 130 QEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I~Twv~~~g~~~~~Rdf~I~d~~~Gevia 209 (406)
||+|.+|+...|+++.||+..++|.+.|++|||++++|+|+|||+|||+|+|+||+.+.++.++.|+|.|+|.++|++++
T Consensus 167 Qd~A~~Hs~~lGll~~Gfg~~~~m~~~gl~WVLtr~~I~~~R~P~~gD~V~V~Twv~~~~k~~~~Rdf~I~D~~~Ge~la 246 (419)
T PLN02370 167 QETALNHVKTAGLLGDGFGSTPEMSKRNLIWVVTRMQVLVDRYPTWGDVVQVDTWVSASGKNGMRRDWLVRDCKTGETLT 246 (419)
T ss_pred HHHHHHHHHHhCccccccccHHHHHhCCceEEEEEEEEEeCcCCCCCCEEEEEEEEeeCCCCEEEEEEEEEECCCCeEEE
Confidence 99999999877776677876567889999999999999999999999999999999999999999999999856899999
Q ss_pred EEEEEEEEEecCCCceecCCHHHHHhcCccccccccccccCcccccCCCcc-ccccccceeeccccCccCCccchHHHHH
Q 015458 210 RATSTWVMMNQQTRRLSKIPAEVRAEISPWFIDKQAIIEDVPEKISKLDDT-AKYVNSDLKPKRSDLDMNHHVNNVKYVR 288 (406)
Q Consensus 210 ~AtS~wVl~D~~tRRpvrIP~evr~~i~~~~~~~~~~~~~~~~ki~kl~~~-~~~~~~~~~vR~sDiD~ngHVNN~~Y~~ 288 (406)
+|+|+||+||++||||+|||+++++.+.+|..+.....++.++|++++++. +++....++|||+|||.||||||++|++
T Consensus 247 ~A~SvWV~mD~~TRRpvRIP~Evr~~i~~y~~~~~~~i~~~~~kl~~l~~~~~~~~~~~~~VRysDLD~NgHVNNvkYi~ 326 (419)
T PLN02370 247 RASSVWVMMNKLTRRLSKIPEEVRGEIEPYFLNSDPVVNEDSRKLPKLDDKTADYIRKGLTPRWSDLDVNQHVNNVKYIG 326 (419)
T ss_pred EEEEEEEEEECCCCcccCCCHHHHHhhhhcccccccccccccccCCccccccccceeeeeeecHHHCcccCccccHHHHH
Confidence 999999999999999999999999888888665433333456788877642 2344456999999999999999999999
Q ss_pred HHHHhCCcchhccCceEEEEEEEecccCCCCeEEEEEEEcCCCeeeeeeeccccceeeccccccceeeccCCCcccccCC
Q 015458 289 WMLETIPDRILESNQLSGITLEYRRECGGSDVVQSLCQPDEDGILKDGVKQDTASIRLLNGFSLASEIVDGGGLIASFEK 368 (406)
Q Consensus 289 w~~e~lp~e~~~~~~l~~i~i~Y~~E~~~gd~v~~~t~v~~~~~~s~~~~q~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 368 (406)
|++|++|.++++.|.+++++|+|++||.+||.|++.+.+.+.+.. + ..++
T Consensus 327 Wild~lP~e~l~~~~l~~i~I~Y~kE~~~gd~V~s~~~~~~~~~~-------------------------~-----~~~~ 376 (419)
T PLN02370 327 WILESAPPPIMESHELAAITLEYRRECGRDSVLQSLTAVSGTGIG-------------------------N-----LGTA 376 (419)
T ss_pred HHHhhCchhhhhcceEEEEEEEEcccCCCCCEEEEEEeecccccc-------------------------c-----ccCC
Confidence 999999999999999999999999999999999999886544220 0 0012
Q ss_pred CCeEEEEEEEeeCCCCceeEEEEEEEeecCCC
Q 015458 369 GPLRFTHLLQAKGETQNEEIVRGRTTWKKKPS 400 (406)
Q Consensus 369 ~~~~~~hllr~~~~~~~~ei~rgrT~W~~k~~ 400 (406)
....|.|++|.+++ .++++|+|+|+||.+
T Consensus 377 ~~~~~~h~~~~~dG---~e~a~a~t~Wr~~~~ 405 (419)
T PLN02370 377 GDVECQHLLRLEDG---AEIVRGRTEWRPKHA 405 (419)
T ss_pred CcceEEEEEEcCCC---eEEEEEEEEEEECCc
Confidence 23569999996655 899999999999963
No 2
>PF01643 Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR002864 This entry represents various acyl-acyl carrier protein (ACP) thioesterases (TE) which terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid []. These proteins contain a duplication of two 4HBT-like domains.; GO: 0016790 thiolester hydrolase activity, 0006633 fatty acid biosynthetic process; PDB: 2ESS_A 2OWN_A.
Probab=100.00 E-value=1.9e-53 Score=412.26 Aligned_cols=255 Identities=35% Similarity=0.628 Sum_probs=183.5
Q ss_pred ceeEEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcc-----cccccCCeEEEEEEeEEeEeccCC
Q 015458 100 GVGYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGAT-----HGMMRNNLIWVVSRMQVEIDHYPI 174 (406)
Q Consensus 100 g~~f~~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~-----~~m~~~gl~WVV~r~~Ie~~r~p~ 174 (406)
|.+|+++++|+++|||.+|++++..+++||||+|..|+... |+|.. ++|.+.|++|||+|++|+|.|+|+
T Consensus 1 g~~y~~~~~v~~~e~d~~~~l~l~~l~~~~qe~a~~h~~~l-----G~~~~~~~~~~~l~~~~~~Wvl~r~~i~i~r~P~ 75 (261)
T PF01643_consen 1 GLVYEKEFTVRYYECDPNGRLKLSALLNYFQEAATEHAESL-----GFGMDYFGSTPELKKQGLAWVLSRYQIEIHRYPR 75 (261)
T ss_dssp ---EEEEEE--GGGB-TTSBB-HHHHHHHHHHHHHHHHHHT-----T-SHHH------HHCTTEEEEEEEEEEEESS--B
T ss_pred CceEEEEEEEcceeeCCCCCCCHHHHHHHHHHHHHHHHHHh-----CCCcccchhhhhHhhcCcEEEEEEEEEEEEecCC
Confidence 57999999999999999999999999999999999998643 55543 238999999999999999999999
Q ss_pred CCCEEEEEEEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEEEEecCCCceecCCHHHHHhcCcccccccc-ccccCccc
Q 015458 175 WGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIPAEVRAEISPWFIDKQA-IIEDVPEK 253 (406)
Q Consensus 175 ~gD~I~I~Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wVl~D~~tRRpvrIP~evr~~i~~~~~~~~~-~~~~~~~k 253 (406)
|||+|+|+||+.+.+++++.|+|.|+|.++|++|++|+|.||+||++||||+|+|+++.+.+.+++++... ......++
T Consensus 76 ~~e~i~i~Tw~~~~~~~~~~R~f~i~d~~~G~~l~~a~s~WvliD~~trr~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (261)
T PF01643_consen 76 WGEKITIETWPSGFKRFFAYRDFEIYDAEDGELLARATSIWVLIDLETRRPVRIPEEIIEEYGPFFPDELPEEDIRKLPK 155 (261)
T ss_dssp TT-EEEEEEEEEEE-SSEEEEEEEEE--TTS-EEEEEEEEEEEEETTT-SEE---GGCTCCGGGGB----T-EESSS---
T ss_pred CCCEEEEEEEeccCCCcEEEEEEEEEECCCCcEEEEEEEEEEEEEhhhCCcccCCHHHHhhhhhhccccccccccccccc
Confidence 99999999999999999999999999757999999999999999999999999999888777544433210 01112223
Q ss_pred ccCCCccccccccceeeccccCccCCccchHHHHHHHHHhCCcchhccCceEEEEEEEecccCCCCeEEEEEEEcCCCee
Q 015458 254 ISKLDDTAKYVNSDLKPKRSDLDMNHHVNNVKYVRWMLETIPDRILESNQLSGITLEYRRECGGSDVVQSLCQPDEDGIL 333 (406)
Q Consensus 254 i~kl~~~~~~~~~~~~vR~sDiD~ngHVNN~~Y~~w~~e~lp~e~~~~~~l~~i~i~Y~~E~~~gd~v~~~t~v~~~~~~ 333 (406)
+++..........+++|||+|||+||||||++|++|++|++|.++++.+.+++++|.|++||.+||.|.+.+.+....
T Consensus 156 ~~~~~~~~~~~~~~~~vr~sDiD~N~HVNN~~Yl~w~~d~lp~~~~~~~~~~~i~I~y~~E~~~gd~i~~~~~~~~~~-- 233 (261)
T PF01643_consen 156 IPKNPPEEPEFEKEFTVRYSDIDMNGHVNNARYLDWALDALPEEFLEKYQIKSIDINYKKEIRYGDTITSYTEVEKDE-- 233 (261)
T ss_dssp -------TTSECEEEE--GGGEETTTCE-HHHHHHHHHCCS-HHHHCCEEEEEEEEEE-S--BTT-EEEEEEEEEEEC--
T ss_pred ccccCChhhheeecccccHHHCCCCCCcCHHHHHHHHHHhCcchhhccCCcEEEEEEEccccCCCCEEEEEEEEcccc--
Confidence 322222222234689999999999999999999999999999999999999999999999999999999988865221
Q ss_pred eeeeeccccceeeccccccceeeccCCCcccccCCCCeEEEEEEEeeCCCCceeEEEEEEEeec
Q 015458 334 KDGVKQDTASIRLLNGFSLASEIVDGGGLIASFEKGPLRFTHLLQAKGETQNEEIVRGRTTWKK 397 (406)
Q Consensus 334 s~~~~q~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~hllr~~~~~~~~ei~rgrT~W~~ 397 (406)
.+....|.|.|+..++ .++|+++|+|+|
T Consensus 234 ---------------------------------~~~~~~~~h~i~~~~g---~~~~~~~~~W~~ 261 (261)
T PF01643_consen 234 ---------------------------------EEDGLSTLHEIRNEDG---EEVARARTEWQK 261 (261)
T ss_dssp ---------------------------------CTTEEEEEEEEECT-T---CEEEEEEEEEE-
T ss_pred ---------------------------------cCCceEEEEEEEcCCC---ceEEEEEEEEcC
Confidence 1133689999999874 899999999986
No 3
>COG3884 FatA Acyl-ACP thioesterase [Lipid metabolism]
Probab=100.00 E-value=3.8e-34 Score=266.38 Aligned_cols=216 Identities=23% Similarity=0.353 Sum_probs=181.1
Q ss_pred eeEEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcc--cccccCCeEEEEEEeEEeEeccCCCCCE
Q 015458 101 VGYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGAT--HGMMRNNLIWVVSRMQVEIDHYPIWGEV 178 (406)
Q Consensus 101 ~~f~~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~--~~m~~~gl~WVV~r~~Ie~~r~p~~gD~ 178 (406)
.++..++.|.+|+.|+.|++.....+.+..+++..+. .|+|.. ..+.+.++.|+|.++.|++.|||.+||.
T Consensus 2 ~~~k~~~~vP~~~~d~~g~i~~~~~l~l~~~i~~~Qs-------i~lg~~~~~~lee~~l~WiV~~~~i~~ir~pef~e~ 74 (250)
T COG3884 2 SVDKQNMPVPFYWPDAVGDIDITSRLRLDLQIRGIQS-------IGLGQLDVAGLEEYHLLWIVRRTEIDVIRPPEFGEM 74 (250)
T ss_pred cchhhcCCCccchhhhcCCcchhhhhhhhhhhcceee-------cccchhhhhhHhhcCceEEEEEEEEEEeeccccCCc
Confidence 4677888899999999999999999999999876552 345422 1467789999999999999999999999
Q ss_pred EEEEEEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEEEEecCCCceecCCHHHHHhcCccccccccccccCcccccC-C
Q 015458 179 VEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIPAEVRAEISPWFIDKQAIIEDVPEKISK-L 257 (406)
Q Consensus 179 I~I~Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wVl~D~~tRRpvrIP~evr~~i~~~~~~~~~~~~~~~~ki~k-l 257 (406)
|+|+||+.++.+++++|+|.+.+ .|+.++.+.+.|++||.+||||.++++++.+.+..-+..+.. ..+..+.+ +
T Consensus 75 iti~t~~~s~~~ffcyrrf~~~~--~gg~Lie~~a~wilmn~dTrkp~ri~~d~la~~~~t~~~k~~---r~~~~l~~~~ 149 (250)
T COG3884 75 ITIETWCSSISNFFCYRRFRLDG--RGGGLIEIEAFWILMNRDTRKPARITDDLLAPFNLTTEKKRL---RWPKYLSSRL 149 (250)
T ss_pred ceEEEeeccccceEEEEEEEEec--CCCcEEEEEEEEEEEccccccceeccHHHhhhhcccchhhee---ccccccCccc
Confidence 99999999999999999999996 899999999999999999999999999998776533222111 11222221 2
Q ss_pred CccccccccceeeccccCccCCccchHHHHHHHHHhCCcchhccCceEEEEEEEecccCCCCeEEEEEEEcCCC
Q 015458 258 DDTAKYVNSDLKPKRSDLDMNHHVNNVKYVRWMLETIPDRILESNQLSGITLEYRRECGGSDVVQSLCQPDEDG 331 (406)
Q Consensus 258 ~~~~~~~~~~~~vR~sDiD~ngHVNN~~Y~~w~~e~lp~e~~~~~~l~~i~i~Y~~E~~~gd~v~~~t~v~~~~ 331 (406)
+. .....+.||+.|||+||||||++|++|++|.++.+++..+.+.+++++|.+|+.+|+.+++.+.+...+
T Consensus 150 e~---s~~~~f~vR~~DID~f~HvNNskY~~wi~e~l~~~~~~~~~p~r~~l~y~keva~G~~iti~~e~~~~~ 220 (250)
T COG3884 150 EA---SEIHDFPVRYTDIDMFGHVNNSKYWSWIEEVLGSEFLKLYGPLRLTLEYVKEVAPGEKITIVYEVHPLE 220 (250)
T ss_pred cc---cccccceeEEEeeccccccccceehHHHHHHHhhhhHhhcccceeEEEEEcccCCCCeEEEEEEEcccC
Confidence 21 123478999999999999999999999999999999999999999999999999999999998887654
No 4
>PRK10800 acyl-CoA thioesterase YbgC; Provisional
Probab=99.93 E-value=3e-25 Score=192.42 Aligned_cols=128 Identities=15% Similarity=0.208 Sum_probs=116.5
Q ss_pred eEEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEE
Q 015458 102 GYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEI 181 (406)
Q Consensus 102 ~f~~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I 181 (406)
.|..+++|||+|||++|||+++.|++|||+|+..|+.. .|++.. .+.+.|++|++++++++|.+|+++||.|+|
T Consensus 2 ~f~~~~~Vr~~d~D~~Ghv~~~~y~~~~e~a~~~~~~~-----~g~~~~-~~~~~~~~~~v~~~~i~y~~~~~~~d~i~v 75 (130)
T PRK10800 2 LFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRH-----HHFSQQ-ALLAERVAFVVRKMTVEYYAPARLDDMLEV 75 (130)
T ss_pred ceEEEEEEeehhcCCCCeEehHHHHHHHHHHHHHHHHH-----cCCCHH-HHHhCCCEEEEEEEEEEEcCcccCCCEEEE
Confidence 57889999999999999999999999999999999752 366543 466778999999999999999999999999
Q ss_pred EEEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEEEEecCCCceecCCHHHHHhc
Q 015458 182 DTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIPAEVRAEI 236 (406)
Q Consensus 182 ~Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wVl~D~~tRRpvrIP~evr~~i 236 (406)
+||+.+.|+.++...|++++ .+|+++++|.++||++|.+++||++||+++++.+
T Consensus 76 ~t~v~~~~~~s~~~~~~i~~-~~g~~~a~~~~~~v~~d~~~~r~~~iP~~l~~~~ 129 (130)
T PRK10800 76 QSEITSMRGTSLTFTQRIVN-AEGTLLNEAEVLIVCVDPLKMKPRALPKSIVAEF 129 (130)
T ss_pred EEEEEeeCcEEEEEEEEEEc-CCCeEEEEEEEEEEEEECCCCcCcCCCHHHHHhh
Confidence 99999999999888899986 5899999999999999999999999999998754
No 5
>TIGR02799 thio_ybgC tol-pal system-associated acyl-CoA thioesterase. The tol-pal system consists of five critical genes. Inner membrane proteins TolQ and TolR convert protomotive force to energy that is transduced through TolA to an outer membrane complex of TolB and Pal. The system is known to be required to maintain outer membrane integrity. In a system with several homologous parts, ExbB and ExbD transduces energy through TonB to a variety of outer membrane proteins, many of which are siderophore receptors. The tol-pal system therefore may also be involved in transport. This family consists of a protein nearly always found in operons with the genes of the tol-pal system. The significance of this thioesterase to the tol-pal system is unclear, but either of two observations may be relevant. First, Pal, or peptidoglycan-associated lipoprotein, has a conserved N-terminal cleavage and acylation that makes it a lipoprotein. Second, the tol-pal system is implicated not only in the import o
Probab=99.91 E-value=2.5e-23 Score=178.31 Aligned_cols=124 Identities=16% Similarity=0.248 Sum_probs=112.9
Q ss_pred EEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccc-cCCeEEEEEEeEEeEeccCCCCCEEEE
Q 015458 103 YRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMM-RNNLIWVVSRMQVEIDHYPIWGEVVEI 181 (406)
Q Consensus 103 f~~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~-~~gl~WVV~r~~Ie~~r~p~~gD~I~I 181 (406)
|+.+++|||+|||++|||+++.|++|||+|+..++.. .|++.. .+. +.|.+|++++++++|.+|+++||.|.|
T Consensus 1 f~~~~~vr~~d~D~~Ghv~~~~y~~~~~~a~~~~~~~-----~g~~~~-~~~~~~~~~~vv~~~~i~y~~~~~~gd~v~v 74 (126)
T TIGR02799 1 FRWPIRVYYEDTDAGGVVYHANYLKFMERARTEWLRA-----LGFEQS-ALLEETGLVFVVRSMELDYLKPARLDDLLTV 74 (126)
T ss_pred CcceEEEEEeccCCCceEEechHHHHHHHHHHHHHHH-----cCCCHH-HHhhcCCcEEEEEEEEEEEcCcccCCCEEEE
Confidence 5678999999999999999999999999999999852 266543 453 568999999999999999999999999
Q ss_pred EEEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEEEEecCCCceecCCHHHHH
Q 015458 182 DTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIPAEVRA 234 (406)
Q Consensus 182 ~Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wVl~D~~tRRpvrIP~evr~ 234 (406)
+||+.+.++.++.+.|.|++ +|+++++|.++||++|.+++||+++|+++++
T Consensus 75 ~~~v~~~~~~~~~~~~~i~~--~g~~~a~~~~~~v~vd~~~~~~~~~p~~~~~ 125 (126)
T TIGR02799 75 TTRVVELKGASLVFAQEVRR--GDTLLCEATVEVACVDASDMRPRRLPAELRA 125 (126)
T ss_pred EEEEEecCceEEEEEEEEEe--CCEEEEEEEEEEEEEECCCCcCcCCCHHHhh
Confidence 99999999999999999994 7999999999999999999999999999875
No 6
>TIGR00051 acyl-CoA thioester hydrolase, YbgC/YbaW family. This model describes a subset of related acyl-CoA thioesterases that include several at least partially characterized proteins. YbgC is an acyl-CoA thioesterase associated with the Tol-Pal system. YbaW is part of the FadM regulon.
Probab=99.89 E-value=1.1e-22 Score=171.14 Aligned_cols=117 Identities=15% Similarity=0.152 Sum_probs=105.8
Q ss_pred EEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEEEEEE
Q 015458 106 TVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWV 185 (406)
Q Consensus 106 ~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I~Twv 185 (406)
+++|||+|||++|||+++.|++|||+|+..|+.. .|++.. .+.+.|++|++++++++|++||++||.|+|+||+
T Consensus 1 ~~~V~~~d~D~~G~v~~~~y~~~~~~a~~~~~~~-----~g~~~~-~~~~~~~~~~v~~~~i~y~~~~~~gd~v~v~~~~ 74 (117)
T TIGR00051 1 PVRVYYEDTDAQGIVYHANYLRYCERARTEFLRS-----LGFPQS-VLRAEGVAFVVVNINIEYKKPARLDDVLEIRTQI 74 (117)
T ss_pred CEEEEEeccCCCcEEEehHHHHHHHHHHHHHHHH-----cCCCHH-HHHhCCCEEEEEEEEEEECCcccCCCEEEEEEEE
Confidence 3789999999999999999999999999999852 255542 5677899999999999999999999999999999
Q ss_pred eeeCCcEEEEEEEEEecCCCcEEEEEEEEEEEEecCCCceecCC
Q 015458 186 GASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIP 229 (406)
Q Consensus 186 ~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wVl~D~~tRRpvrIP 229 (406)
...++.++.+.|+|++ .+|++++.+.++||+||.+++||++||
T Consensus 75 ~~~~~~s~~~~~~i~~-~~~~~~~~~~~~~v~~d~~~~r~~~ip 117 (117)
T TIGR00051 75 EELNGFSFVFSQEIFN-EDEALLKAATVIVVCVDPKKQKPVAIP 117 (117)
T ss_pred EecCcEEEEEEEEEEe-CCCcEEEeeEEEEEEEECCCCeEcCCC
Confidence 9999999999999997 577888888888999999999999998
No 7
>COG0824 FcbC Predicted thioesterase [General function prediction only]
Probab=99.89 E-value=3e-22 Score=176.63 Aligned_cols=131 Identities=17% Similarity=0.286 Sum_probs=119.9
Q ss_pred ceeEEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEE
Q 015458 100 GVGYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVV 179 (406)
Q Consensus 100 g~~f~~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I 179 (406)
...|..+++|||+|+|++|||++++|+.|||+|+..++.. .|+... .+.+.|+.|+|++++|+|++|.++||.+
T Consensus 3 ~~~~~~~~~V~~~d~D~~GhV~~a~Yl~~fE~ar~~~l~~-----~g~~~~-~~~~~~~~~~v~~~~i~y~~p~~~~d~l 76 (137)
T COG0824 3 SFPFSTPIRVRYEDTDAMGHVNNANYLVFFEEARTEFLRA-----LGFDYA-DLEEGGIAFVVVEAEIDYLRPARLGDVL 76 (137)
T ss_pred CcceEEEEEEEhhhcCcccEEecchHHHHHHHHHHHHHHH-----cCCCHH-HHhhCCcEEEEEEEEeEECCCccCCCEE
Confidence 3578999999999999999999999999999999999862 367654 5777789999999999999999999999
Q ss_pred EEEEEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEEEEecCCCceecCCHHHHHhcCc
Q 015458 180 EIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIPAEVRAEISP 238 (406)
Q Consensus 180 ~I~Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wVl~D~~tRRpvrIP~evr~~i~~ 238 (406)
+|+||+.+.|+.++...|+|++ .++++++|.+++|++|.+++||+++|+++++.+..
T Consensus 77 ~v~~~v~~~~~~s~~~~~~i~~--~~~l~a~~~~~~V~v~~~~~kp~~~P~~~~~~l~~ 133 (137)
T COG0824 77 TVRTRVEELGGKSLTLGYEIVN--EDELLATGETTLVCVDLKTGKPVPLPPELREALEA 133 (137)
T ss_pred EEEEEEEeecCeEEEEEEEEEe--CCEEEEEEEEEEEEEECCCCCcccCCHHHHHHHHH
Confidence 9999999999999999999996 34999999999999999999999999999988754
No 8
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=99.81 E-value=4.1e-19 Score=186.83 Aligned_cols=133 Identities=14% Similarity=0.114 Sum_probs=119.0
Q ss_pred CceeEEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCE
Q 015458 99 GGVGYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEV 178 (406)
Q Consensus 99 ~g~~f~~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~ 178 (406)
+..++..+++|+++|||++|||++..|++|||+++.+|+.. .|++. .....+.+|++++.+|+|++|+++||.
T Consensus 342 ~~~~~~~~~~V~~~~~D~~Ghvnn~~Yl~~~e~Ar~~~~~~-----~G~~~--~~~~~~~~~vvv~~~i~y~rp~~~gD~ 414 (495)
T PRK07531 342 SQPLRLVETKVPPAWVDYNGHMTEHRYLQVFGDTTDALLRL-----IGVDA--AYVAAGHSYYTVETHIRHLGEAKAGQA 414 (495)
T ss_pred CCceEEEeEEECHHHcCCCCeEcHHHHHHHHHHHHHHHHHH-----cCCCH--HHHhcCCcEEEEEEEEEEcccCCCCCE
Confidence 34556789999999999999999999999999999999852 25654 233458899999999999999999999
Q ss_pred EEEEEEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEEEEecCCCceecCCHHHHHhcCcc
Q 015458 179 VEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIPAEVRAEISPW 239 (406)
Q Consensus 179 I~I~Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wVl~D~~tRRpvrIP~evr~~i~~~ 239 (406)
|+|+||+...++.++.+.|+|++ .+|++++++.++||++|.++||++++|+++++.+..+
T Consensus 415 v~I~t~v~~~~~~s~~~~~~i~~-~~g~l~A~g~~~~v~vD~~trr~~~iP~e~r~~l~~~ 474 (495)
T PRK07531 415 LHVETQLLSGDEKRLHLFHTLYD-AGGELIATAEHMLLHVDLKAGKAVPAPAAVLAALKPI 474 (495)
T ss_pred EEEEEEEEecCCcEEEEEEEEEC-CCCcEEEEEEEEEEEEECCCCccCCCCHHHHHHHHHH
Confidence 99999999999999999999997 7899999999999999999999999999999887643
No 9
>PF13279 4HBT_2: Thioesterase-like superfamily; PDB: 2W3X_E 3CK1_A 2GF6_C 2NUJ_A 2HLJ_A 2XFL_B 2XEM_B 2OIW_B 2HX5_A 2FUJ_A ....
Probab=99.81 E-value=1e-18 Score=148.82 Aligned_cols=119 Identities=21% Similarity=0.270 Sum_probs=97.1
Q ss_pred eeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEEEEEEeee
Q 015458 109 VRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGAS 188 (406)
Q Consensus 109 VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I~Twv~~~ 188 (406)
|||+||| +||++++.|++|+++|+..++.. .|+ . ..+...|+++++++.+++|++|.++||.++|++++.+.
T Consensus 1 Vr~~D~D-~ghv~n~~Y~~~~e~ar~~~~~~-----~g~-~-~~~~~~~~~~~v~~~~i~y~~~~~~~d~~~v~~~~~~~ 72 (121)
T PF13279_consen 1 VRWSDTD-NGHVNNARYLRYFEEAREEFLEE-----LGL-Y-DELQGQGIGFVVAESEIDYLRPLRFGDRLEVETRVEEI 72 (121)
T ss_dssp --GGGB--TSSB-HHHHHHHHHHHHHHHHHH-----HTS-C-HHHTTTTEEEEEEEEEEEE-S--BTTSEEEEEEEEEEE
T ss_pred CCHHHcc-CCeEcHHHHHHHHHHHHHHHHHh-----cch-h-hHHHhcCceEEEEEEEEEEcccccCCCEEEEEEEEEEE
Confidence 7999999 99999999999999999998752 255 2 36788899999999999999999999999999999999
Q ss_pred CCcEEEEEEEEEecCCCcE--EEEEEEEEEEEecCCCceecCCHHHHHhc
Q 015458 189 GKNGMRRDWLIRSQATGHI--FARATSTWVMMNQQTRRLSKIPAEVRAEI 236 (406)
Q Consensus 189 g~~~~~Rdf~I~d~~~Gev--ia~AtS~wVl~D~~tRRpvrIP~evr~~i 236 (406)
++.++...|.|++..+|+. +|++.+++|++|.++ |++++|+++++.|
T Consensus 73 ~~~s~~~~~~i~~~~~g~~~~~a~~~~~~v~~d~~~-r~~~~P~~~~~~l 121 (121)
T PF13279_consen 73 GGKSFRFEQEIFRPADGKGELAATGRTVMVFVDYKT-RSVPIPDELREAL 121 (121)
T ss_dssp ESSEEEEEEEEEECSTTEEEEEEEEEEEEEEEETTT-CE-B--HHHHHHH
T ss_pred CCcEEEEEEEEEEcCCCceEEEEEEEEEEEEEeCCC-CcCCCCHHHHhcC
Confidence 9999999999997445655 999999999999998 6999999998764
No 10
>cd00586 4HBT 4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active sites. There is no evidence to suggest that 4HBT is related to the type I thioesterases functioning in primary or secondary metabolic pathways. Each subunit of the 4HBT tetramer adopts a so-called hot-dog fold similar to those of beta-hydroxydecanoyl-ACP dehydratase, (R)-specific enoyl-CoA hydratase, and type II, thioesterase (TEII).
Probab=99.68 E-value=8.4e-16 Score=125.36 Aligned_cols=110 Identities=17% Similarity=0.225 Sum_probs=98.4
Q ss_pred EEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEEE
Q 015458 103 YRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEID 182 (406)
Q Consensus 103 f~~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I~ 182 (406)
|..++.|+++|+|++|++++..|++|+++++..++... |++.. .+...+.+|++.+.+++|.+|+.+||.|+|+
T Consensus 1 ~~~~~~v~~~d~d~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~i~v~ 74 (110)
T cd00586 1 FTLEIRVRFGDTDAAGHVNNARYLRYFEEAREEFLREL-----GLGYD-ELEEQGLGLVVVELEIDYLRPLRLGDRLTVE 74 (110)
T ss_pred CcEEEEEEEhhcCCCCEEchhHHHHHHHHHHHHHHHHc-----CCCHH-HHHhCCceEEEEEeEeeEcCccCCCCEEEEE
Confidence 46789999999999999999999999999999998532 44432 3467789999999999999999999999999
Q ss_pred EEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEEEEe
Q 015458 183 TWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMN 219 (406)
Q Consensus 183 Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wVl~D 219 (406)
+|+.+.++.++.+.+.+++ ++|++++++.+.|+++|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~-~~g~~~a~~~~~~~~~d 110 (110)
T cd00586 75 TRVLRLGRKSFTFEQEIFR-EDGELLATAETVLVCVD 110 (110)
T ss_pred EEEEecCcEEEEEEEEEEC-CCCeEEEEEEEEEEEeC
Confidence 9999999999999999996 47999999999999987
No 11
>COG0824 FcbC Predicted thioesterase [General function prediction only]
Probab=99.38 E-value=1.9e-12 Score=114.28 Aligned_cols=69 Identities=23% Similarity=0.286 Sum_probs=57.4
Q ss_pred cceeeccccCccCCccchHHHHHHHHHhCCcchh-----------c---cCceEEEEEEEecccCCCCeEEEEEEEcCCC
Q 015458 266 SDLKPKRSDLDMNHHVNNVKYVRWMLETIPDRIL-----------E---SNQLSGITLEYRRECGGSDVVQSLCQPDEDG 331 (406)
Q Consensus 266 ~~~~vR~sDiD~ngHVNN~~Y~~w~~e~lp~e~~-----------~---~~~l~~i~i~Y~~E~~~gd~v~~~t~v~~~~ 331 (406)
.+++|||.|+|.+|||||++|+.|++++.- +++ + ...+++++|+|++|+++||.+.+.+++...+
T Consensus 8 ~~~~V~~~d~D~~GhV~~a~Yl~~fE~ar~-~~l~~~g~~~~~~~~~~~~~~v~~~~i~y~~p~~~~d~l~v~~~v~~~~ 86 (137)
T COG0824 8 TPIRVRYEDTDAMGHVNNANYLVFFEEART-EFLRALGFDYADLEEGGIAFVVVEAEIDYLRPARLGDVLTVRTRVEELG 86 (137)
T ss_pred EEEEEEhhhcCcccEEecchHHHHHHHHHH-HHHHHcCCCHHHHhhCCcEEEEEEEEeEECCCccCCCEEEEEEEEEeec
Confidence 578999999999999999999999999841 111 1 1457899999999999999999999998876
Q ss_pred eeee
Q 015458 332 ILKD 335 (406)
Q Consensus 332 ~~s~ 335 (406)
.++.
T Consensus 87 ~~s~ 90 (137)
T COG0824 87 GKSL 90 (137)
T ss_pred CeEE
Confidence 5443
No 12
>PRK10800 acyl-CoA thioesterase YbgC; Provisional
Probab=99.35 E-value=3.7e-12 Score=110.26 Aligned_cols=67 Identities=15% Similarity=0.076 Sum_probs=55.4
Q ss_pred cceeeccccCccCCccchHHHHHHHHHhC-------Cc--chhc----cCceEEEEEEEecccCCCCeEEEEEEEcCCCe
Q 015458 266 SDLKPKRSDLDMNHHVNNVKYVRWMLETI-------PD--RILE----SNQLSGITLEYRRECGGSDVVQSLCQPDEDGI 332 (406)
Q Consensus 266 ~~~~vR~sDiD~ngHVNN~~Y~~w~~e~l-------p~--e~~~----~~~l~~i~i~Y~~E~~~gd~v~~~t~v~~~~~ 332 (406)
.+++|||+|+|.+|||||+.|++|++++. +. ..+. ...+.+.+++|++|+++||.|.+.+++...+.
T Consensus 5 ~~~~Vr~~d~D~~Ghv~~~~y~~~~e~a~~~~~~~~g~~~~~~~~~~~~~~v~~~~i~y~~~~~~~d~i~v~t~v~~~~~ 84 (130)
T PRK10800 5 WPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHHFSQQALLAERVAFVVRKMTVEYYAPARLDDMLEVQSEITSMRG 84 (130)
T ss_pred EEEEEeehhcCCCCeEehHHHHHHHHHHHHHHHHHcCCCHHHHHhCCCEEEEEEEEEEEcCcccCCCEEEEEEEEEeeCc
Confidence 46899999999999999999999999983 11 1111 23468999999999999999999999988654
No 13
>TIGR02799 thio_ybgC tol-pal system-associated acyl-CoA thioesterase. The tol-pal system consists of five critical genes. Inner membrane proteins TolQ and TolR convert protomotive force to energy that is transduced through TolA to an outer membrane complex of TolB and Pal. The system is known to be required to maintain outer membrane integrity. In a system with several homologous parts, ExbB and ExbD transduces energy through TonB to a variety of outer membrane proteins, many of which are siderophore receptors. The tol-pal system therefore may also be involved in transport. This family consists of a protein nearly always found in operons with the genes of the tol-pal system. The significance of this thioesterase to the tol-pal system is unclear, but either of two observations may be relevant. First, Pal, or peptidoglycan-associated lipoprotein, has a conserved N-terminal cleavage and acylation that makes it a lipoprotein. Second, the tol-pal system is implicated not only in the import o
Probab=99.30 E-value=1.4e-11 Score=105.39 Aligned_cols=67 Identities=16% Similarity=0.188 Sum_probs=54.7
Q ss_pred cceeeccccCccCCccchHHHHHHHHHhC---------Ccc-hhcc----CceEEEEEEEecccCCCCeEEEEEEEcCCC
Q 015458 266 SDLKPKRSDLDMNHHVNNVKYVRWMLETI---------PDR-ILES----NQLSGITLEYRRECGGSDVVQSLCQPDEDG 331 (406)
Q Consensus 266 ~~~~vR~sDiD~ngHVNN~~Y~~w~~e~l---------p~e-~~~~----~~l~~i~i~Y~~E~~~gd~v~~~t~v~~~~ 331 (406)
.+++|||+|+|.+|||||+.|+.|++++. +.+ .... ..+.+.+++|++|+++||.|.+.+++...+
T Consensus 3 ~~~~vr~~d~D~~Ghv~~~~y~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~vv~~~~i~y~~~~~~gd~v~v~~~v~~~~ 82 (126)
T TIGR02799 3 WPIRVYYEDTDAGGVVYHANYLKFMERARTEWLRALGFEQSALLEETGLVFVVRSMELDYLKPARLDDLLTVTTRVVELK 82 (126)
T ss_pred ceEEEEEeccCCCceEEechHHHHHHHHHHHHHHHcCCCHHHHhhcCCcEEEEEEEEEEEcCcccCCCEEEEEEEEEecC
Confidence 35899999999999999999999998762 221 2111 356899999999999999999999998765
Q ss_pred e
Q 015458 332 I 332 (406)
Q Consensus 332 ~ 332 (406)
.
T Consensus 83 ~ 83 (126)
T TIGR02799 83 G 83 (126)
T ss_pred c
Confidence 4
No 14
>TIGR00051 acyl-CoA thioester hydrolase, YbgC/YbaW family. This model describes a subset of related acyl-CoA thioesterases that include several at least partially characterized proteins. YbgC is an acyl-CoA thioesterase associated with the Tol-Pal system. YbaW is part of the FadM regulon.
Probab=99.30 E-value=2.1e-11 Score=102.36 Aligned_cols=66 Identities=21% Similarity=0.296 Sum_probs=54.9
Q ss_pred ceeeccccCccCCccchHHHHHHHHHhC---------Ccchhcc----CceEEEEEEEecccCCCCeEEEEEEEcCCCe
Q 015458 267 DLKPKRSDLDMNHHVNNVKYVRWMLETI---------PDRILES----NQLSGITLEYRRECGGSDVVQSLCQPDEDGI 332 (406)
Q Consensus 267 ~~~vR~sDiD~ngHVNN~~Y~~w~~e~l---------p~e~~~~----~~l~~i~i~Y~~E~~~gd~v~~~t~v~~~~~ 332 (406)
+++|||+|+|.||||||+.|+.|++++. +...+.. ..+.+++++|++|+++||.|.+.+++...+.
T Consensus 1 ~~~V~~~d~D~~G~v~~~~y~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~v~~~~i~y~~~~~~gd~v~v~~~~~~~~~ 79 (117)
T TIGR00051 1 PVRVYYEDTDAQGIVYHANYLRYCERARTEFLRSLGFPQSVLRAEGVAFVVVNINIEYKKPARLDDVLEIRTQIEELNG 79 (117)
T ss_pred CEEEEEeccCCCcEEEehHHHHHHHHHHHHHHHHcCCCHHHHHhCCCEEEEEEEEEEECCcccCCCEEEEEEEEEecCc
Confidence 3689999999999999999999999983 2222222 2578999999999999999999999987654
No 15
>PF13279 4HBT_2: Thioesterase-like superfamily; PDB: 2W3X_E 3CK1_A 2GF6_C 2NUJ_A 2HLJ_A 2XFL_B 2XEM_B 2OIW_B 2HX5_A 2FUJ_A ....
Probab=99.28 E-value=9.9e-12 Score=105.67 Aligned_cols=60 Identities=28% Similarity=0.402 Sum_probs=43.3
Q ss_pred eccccCccCCccchHHHHHHHHHhCCcchh---------c----cCceEEEEEEEecccCCCCeEEEEEEEcCCC
Q 015458 270 PKRSDLDMNHHVNNVKYVRWMLETIPDRIL---------E----SNQLSGITLEYRRECGGSDVVQSLCQPDEDG 331 (406)
Q Consensus 270 vR~sDiD~ngHVNN~~Y~~w~~e~lp~e~~---------~----~~~l~~i~i~Y~~E~~~gd~v~~~t~v~~~~ 331 (406)
|||+|+| +|||||+.|+.|++++.- +++ . ...+.+.+++|++|+++||.+.+.+++...+
T Consensus 1 Vr~~D~D-~ghv~n~~Y~~~~e~ar~-~~~~~~g~~~~~~~~~~~~~v~~~~i~y~~~~~~~d~~~v~~~~~~~~ 73 (121)
T PF13279_consen 1 VRWSDTD-NGHVNNARYLRYFEEARE-EFLEELGLYDELQGQGIGFVVAESEIDYLRPLRFGDRLEVETRVEEIG 73 (121)
T ss_dssp --GGGB--TSSB-HHHHHHHHHHHHH-HHHHHHTSCHHHTTTTEEEEEEEEEEEE-S--BTTSEEEEEEEEEEEE
T ss_pred CCHHHcc-CCeEcHHHHHHHHHHHHH-HHHHhcchhhHHHhcCceEEEEEEEEEEcccccCCCEEEEEEEEEEEC
Confidence 7999999 999999999999999842 222 1 2346899999999999999999999986653
No 16
>cd03442 BFIT_BACH Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, and brown adipose tissues. The archeal and eukaryotic members of this family have two tandem copies of the conserved hot dog fold, while most bacterial members have only one copy.
Probab=99.26 E-value=2.5e-10 Score=96.40 Aligned_cols=113 Identities=15% Similarity=0.150 Sum_probs=93.5
Q ss_pred eeEEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEe-EEeEeccCCCCCEE
Q 015458 101 VGYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRM-QVEIDHYPIWGEVV 179 (406)
Q Consensus 101 ~~f~~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~-~Ie~~r~p~~gD~I 179 (406)
-.+...++|++.++|+.|+++...|+.++++++..++.. + . +..+++... +++|.+|..+||.|
T Consensus 6 ~~~~~~~~v~~~~~d~~g~v~~g~~~~~~d~a~~~~~~~-------~------~--~~~~~~~~~~~~~f~~p~~~gd~l 70 (123)
T cd03442 6 TELSTRELVLPEDTNHHGTIFGGWLLEWMDELAGIAAYR-------H------A--GGRVVTASVDRIDFLKPVRVGDVV 70 (123)
T ss_pred cceEEEEEeCCcccCcCCcEeHHHHHHHHHHHHHHHHHH-------H------h--CCcEEEEEECceEEcCccccCcEE
Confidence 356788999999999999999999999999998765421 0 1 112334344 79999999999999
Q ss_pred EEEEEEeeeCCcEEEEEEEEEecC----CCcEEEEEEEEEEEEecCCCceecCC
Q 015458 180 EIDTWVGASGKNGMRRDWLIRSQA----TGHIFARATSTWVMMNQQTRRLSKIP 229 (406)
Q Consensus 180 ~I~Twv~~~g~~~~~Rdf~I~d~~----~Gevia~AtS~wVl~D~~tRRpvrIP 229 (406)
.+++++.+.|+.++..++.+++.+ +++++++|..++|++| .++||.++|
T Consensus 71 ~i~~~v~~~g~~~~~~~~~i~~~~~~~~~~~~~a~~~~~~v~~~-~~~~~~~~p 123 (123)
T cd03442 71 ELSARVVYTGRTSMEVGVEVEAEDPLTGERRLVTSAYFTFVALD-EDGKPRPVP 123 (123)
T ss_pred EEEEEEEEecCCeEEEEEEEEEecCCCCcEEEEEEEEEEEEEEC-CCCCeeeCC
Confidence 999999999999999999998743 3579999999999999 468999887
No 17
>cd00586 4HBT 4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active sites. There is no evidence to suggest that 4HBT is related to the type I thioesterases functioning in primary or secondary metabolic pathways. Each subunit of the 4HBT tetramer adopts a so-called hot-dog fold similar to those of beta-hydroxydecanoyl-ACP dehydratase, (R)-specific enoyl-CoA hydratase, and type II, thioesterase (TEII).
Probab=99.00 E-value=2.3e-09 Score=87.15 Aligned_cols=65 Identities=18% Similarity=0.234 Sum_probs=54.4
Q ss_pred cceeeccccCccCCccchHHHHHHHHHhCCcchh-------------ccCceEEEEEEEecccCCCCeEEEEEEEcCC
Q 015458 266 SDLKPKRSDLDMNHHVNNVKYVRWMLETIPDRIL-------------ESNQLSGITLEYRRECGGSDVVQSLCQPDED 330 (406)
Q Consensus 266 ~~~~vR~sDiD~ngHVNN~~Y~~w~~e~lp~e~~-------------~~~~l~~i~i~Y~~E~~~gd~v~~~t~v~~~ 330 (406)
..+.|+++|+|.+||+||..|++|++++....+. ..+.+.++.++|++|+..||.|.+.+++...
T Consensus 3 ~~~~v~~~d~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~v~~~~~~~ 80 (110)
T cd00586 3 LEIRVRFGDTDAAGHVNNARYLRYFEEAREEFLRELGLGYDELEEQGLGLVVVELEIDYLRPLRLGDRLTVETRVLRL 80 (110)
T ss_pred EEEEEEEhhcCCCCEEchhHHHHHHHHHHHHHHHHcCCCHHHHHhCCceEEEEEeEeeEcCccCCCCEEEEEEEEEec
Confidence 3578999999999999999999999998642111 1245689999999999999999999998764
No 18
>cd03440 hot_dog The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated proteins also share the hotdog fold. These proteins have related, but distinct, catalytic activities that include metabolic roles such as thioester hydrolysis in fatty acid metabolism, and degradation of phenylacetic acid and the environmental pollutant 4-chlorobenzoate. This superfamily also includes the PaaI-like protein FapR, a non-catalytic bacterial homolog involved in transcriptional regulation of fatty acid biosynthesis.
Probab=98.85 E-value=1.2e-07 Score=72.27 Aligned_cols=98 Identities=18% Similarity=0.161 Sum_probs=85.7
Q ss_pred EEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEEEE
Q 015458 104 RQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDT 183 (406)
Q Consensus 104 ~~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I~T 183 (406)
...++|+++++|.+++++...++.++++++..++.. ++ . .+..+++.+++++|.+|+..||.|.+++
T Consensus 2 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~----~--~~~~~~~~~~~~~~~~~~~~g~~v~~~~ 68 (100)
T cd03440 2 VLRLTVTPEDIDGGGIVHGGLLLALADEAAGAAAAR-------LG----G--RGLGAVTLSLDVRFLRPVRPGDTLTVEA 68 (100)
T ss_pred EEEEEeCHHHcCcCCccchHHHHHHHHHHHHHHHHH-------hc----c--CCCeEEEEEEEeEEecCCCCCCEEEEEE
Confidence 457899999999999999999999999999988641 11 1 5789999999999999999999999999
Q ss_pred EEeeeCCcEEEEEEEEEecCCCcEEEEEEEEE
Q 015458 184 WVGASGKNGMRRDWLIRSQATGHIFARATSTW 215 (406)
Q Consensus 184 wv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~w 215 (406)
++...++..+.....+.+ .+|++++.+...+
T Consensus 69 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 99 (100)
T cd03440 69 EVVRVGRSSVTVEVEVRN-EDGKLVATATATF 99 (100)
T ss_pred EEEeccccEEEEEEEEEC-CCCCEEEEEEEEe
Confidence 999999988888888886 4799999997765
No 19
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=98.84 E-value=1.3e-08 Score=107.64 Aligned_cols=68 Identities=13% Similarity=0.066 Sum_probs=56.0
Q ss_pred cceeeccccCccCCccchHHHHHHHHHhC---------Ccchhc---cCceEEEEEEEecccCCCCeEEEEEEEcCCCee
Q 015458 266 SDLKPKRSDLDMNHHVNNVKYVRWMLETI---------PDRILE---SNQLSGITLEYRRECGGSDVVQSLCQPDEDGIL 333 (406)
Q Consensus 266 ~~~~vR~sDiD~ngHVNN~~Y~~w~~e~l---------p~e~~~---~~~l~~i~i~Y~~E~~~gd~v~~~t~v~~~~~~ 333 (406)
.+++|++.|+|.||||||++|++|++++. +..... ...+.+.+|+|++|+++||.|.+.+++...+.+
T Consensus 348 ~~~~V~~~~~D~~Ghvnn~~Yl~~~e~Ar~~~~~~~G~~~~~~~~~~~~vvv~~~i~y~rp~~~gD~v~I~t~v~~~~~~ 427 (495)
T PRK07531 348 VETKVPPAWVDYNGHMTEHRYLQVFGDTTDALLRLIGVDAAYVAAGHSYYTVETHIRHLGEAKAGQALHVETQLLSGDEK 427 (495)
T ss_pred EeEEECHHHcCCCCeEcHHHHHHHHHHHHHHHHHHcCCCHHHHhcCCcEEEEEEEEEEcccCCCCCEEEEEEEEEecCCc
Confidence 47889999999999999999999999873 222111 235789999999999999999999999876543
No 20
>PF03061 4HBT: Thioesterase superfamily; InterPro: IPR006683 This family contains a wide variety of enzymes, principally thioesterases. This family includes 4HBT (3.1.2.23 from EC) which catalyses the final step in the biosynthesis of 4-hydroxybenzoate from 4-chlorobenzoate in the soil dwelling microbe Pseudomonas CBS-3. This family includes various cytosolic long-chain acyl-CoA thioester hydrolases. Long-chain acyl-CoA hydrolases hydrolyse palmitoyl-CoA to CoA and palmitate, they also catalyse the hydrolysis of other long chain fatty acyl-CoA thioesters. ; PDB: 3F5O_F 2F0X_D 2H4U_C 2PRX_A 2OV9_D 1YLI_B 3BJK_F 1IXL_A 3DKZ_B 2EIS_B ....
Probab=98.67 E-value=5.7e-07 Score=69.92 Aligned_cols=79 Identities=16% Similarity=0.192 Sum_probs=68.0
Q ss_pred CCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEEEEEEeeeCCcEEEEE
Q 015458 117 DKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRD 196 (406)
Q Consensus 117 ~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I~Twv~~~g~~~~~Rd 196 (406)
+|+++...|+.|+++|+..++... + ..+...++...+++|.+|.+.||.|++++|+.+.|+.++.-+
T Consensus 1 ~G~v~~g~~~~~~d~a~~~~~~~~-----~--------~~~~~~~~~~~~i~f~~p~~~gd~l~~~~~v~~~g~~~~~~~ 67 (79)
T PF03061_consen 1 NGIVHGGVYLSLFDEAASAALRSH-----G--------GDGRGVVTVELSIDFLRPVRPGDTLRVEARVVRVGRKSFTVE 67 (79)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHHH-----H--------SSTEEEEEEEEEEEESS-BBTTSEEEEEEEEEEEESSEEEEE
T ss_pred CCEEhHHHHHHHHHHHHHHHHHHh-----c--------cCCcceEEEEEEEEEccccCCCeEEEEEEEEEEECCEEEEEE
Confidence 599999999999999998886421 1 116799999999999999999999999999999999999999
Q ss_pred EEEEecCCCcEEE
Q 015458 197 WLIRSQATGHIFA 209 (406)
Q Consensus 197 f~I~d~~~Gevia 209 (406)
+++++ ++++++|
T Consensus 68 ~~v~~-~~~~~~~ 79 (79)
T PF03061_consen 68 VEVYS-EDGRLCA 79 (79)
T ss_dssp EEEEE-TTSCEEE
T ss_pred EEEEE-CCCcEEC
Confidence 99997 6777765
No 21
>PF01643 Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR002864 This entry represents various acyl-acyl carrier protein (ACP) thioesterases (TE) which terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid []. These proteins contain a duplication of two 4HBT-like domains.; GO: 0016790 thiolester hydrolase activity, 0006633 fatty acid biosynthetic process; PDB: 2ESS_A 2OWN_A.
Probab=98.58 E-value=2.2e-07 Score=90.36 Aligned_cols=129 Identities=16% Similarity=0.230 Sum_probs=81.6
Q ss_pred hhccccccchhhcccc-CCCcccccccc--------------cccc---eecCceeEEEEEEeeecCCCCCCCcCHHHHH
Q 015458 65 AEKEGCRINEVQIRQN-IPTKKQFVDPY--------------RHGL---IIEGGVGYRQTVVVRSYEVGPDKTATLESIL 126 (406)
Q Consensus 65 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~--------------~~g~---~~~~g~~f~~~~~VR~~E~D~~G~v~~~~yl 126 (406)
|.+.|..+|-+.+|+. +|. .+.+.+ +.-+ .......+..+++||++|+|.||||||..|+
T Consensus 112 a~s~WvliD~~trr~~ri~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vr~sDiD~N~HVNN~~Yl 189 (261)
T PF01643_consen 112 ATSIWVLIDLETRRPVRIPE--EIIEEYGPFFPDELPEEDIRKLPKIPKNPPEEPEFEKEFTVRYSDIDMNGHVNNARYL 189 (261)
T ss_dssp EEEEEEEEETTT-SEE---G--GCTCCGGGGB----T-EESSS----------TTSECEEEE--GGGEETTTCE-HHHHH
T ss_pred EEEEEEEEEhhhCCcccCCH--HHHhhhhhhcccccccccccccccccccCChhhheeecccccHHHCCCCCCcCHHHHH
Confidence 3458888888777765 232 222222 1111 2234567889999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEEEEEEeeeC-CcEEEEEEEEEecCCC
Q 015458 127 NLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASG-KNGMRRDWLIRSQATG 205 (406)
Q Consensus 127 ~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I~Twv~~~g-~~~~~Rdf~I~d~~~G 205 (406)
+|+.|+--.. +.+ ...+.++.|.|.++..+||.|.+.+.+.... .....-.+.|++ .+|
T Consensus 190 ~w~~d~lp~~----------------~~~---~~~~~~i~I~y~~E~~~gd~i~~~~~~~~~~~~~~~~~~h~i~~-~~g 249 (261)
T PF01643_consen 190 DWALDALPEE----------------FLE---KYQIKSIDINYKKEIRYGDTITSYTEVEKDEEEDGLSTLHEIRN-EDG 249 (261)
T ss_dssp HHHHCCS-HH----------------HHC---CEEEEEEEEEE-S--BTT-EEEEEEEEEEECCTTEEEEEEEEEC-T-T
T ss_pred HHHHHhCcch----------------hhc---cCCcEEEEEEEccccCCCCEEEEEEEEcccccCCceEEEEEEEc-CCC
Confidence 9999953221 111 2347899999999999999999999875433 334445577886 459
Q ss_pred cEEEEEEEEE
Q 015458 206 HIFARATSTW 215 (406)
Q Consensus 206 evia~AtS~w 215 (406)
+++++|.+.|
T Consensus 250 ~~~~~~~~~W 259 (261)
T PF01643_consen 250 EEVARARTEW 259 (261)
T ss_dssp CEEEEEEEEE
T ss_pred ceEEEEEEEE
Confidence 9999999999
No 22
>cd03443 PaaI_thioesterase PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).
Probab=98.52 E-value=4e-06 Score=69.62 Aligned_cols=100 Identities=13% Similarity=0.045 Sum_probs=85.5
Q ss_pred eEEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEE
Q 015458 102 GYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEI 181 (406)
Q Consensus 102 ~f~~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I 181 (406)
.....+++...++|..|.++...|+.+++.++...+.. ....+...++.+++++|.+|+.. +.|.+
T Consensus 13 ~~~~~~~~~~~~~n~~g~vhgg~l~~l~d~a~~~~~~~-------------~~~~~~~~~~~~~~i~f~~p~~~-~~v~~ 78 (113)
T cd03443 13 RVVLRLPVRPRHLNPGGIVHGGAIATLADTAGGLAALS-------------ALPPGALAVTVDLNVNYLRPARG-GDLTA 78 (113)
T ss_pred eEEEEeeCcHhhcCCCCeEeHHHHHHHHHHHHHHHHhh-------------ccCCCCceEEEEEEEeEEcCCCC-CeEEE
Confidence 46778999999999999999999999999988766421 11135677888999999999999 99999
Q ss_pred EEEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEE
Q 015458 182 DTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (406)
Q Consensus 182 ~Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wV 216 (406)
++++.+.++..+.-+..+++ ++|+++++|+.+|+
T Consensus 79 ~~~v~~~g~~~~~~~~~~~~-~~~~~~a~a~~~~~ 112 (113)
T cd03443 79 RARVVKLGRRLAVVEVEVTD-EDGKLVATARGTFA 112 (113)
T ss_pred EEEEEecCceEEEEEEEEEC-CCCCEEEEEEEEEe
Confidence 99999999998888889986 56999999999886
No 23
>PLN02370 acyl-ACP thioesterase
Probab=98.35 E-value=1.8e-06 Score=89.32 Aligned_cols=134 Identities=17% Similarity=0.216 Sum_probs=85.9
Q ss_pred hhhccccccchhhcccc-CCCc-cccccccc----------cccee--cCc--eeEEEEEEeeecCCCCCCCcCHHHHHH
Q 015458 64 AAEKEGCRINEVQIRQN-IPTK-KQFVDPYR----------HGLII--EGG--VGYRQTVVVRSYEVGPDKTATLESILN 127 (406)
Q Consensus 64 ~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~----------~g~~~--~~g--~~f~~~~~VR~~E~D~~G~v~~~~yl~ 127 (406)
.|++.|..+|-+.+|.. +|.+ ...+++|. ..++- ++. ...+..++|||+|+|.||||||..|++
T Consensus 247 ~A~SvWV~mD~~TRRpvRIP~Evr~~i~~y~~~~~~~i~~~~~kl~~l~~~~~~~~~~~~~VRysDLD~NgHVNNvkYi~ 326 (419)
T PLN02370 247 RASSVWVMMNKLTRRLSKIPEEVRGEIEPYFLNSDPVVNEDSRKLPKLDDKTADYIRKGLTPRWSDLDVNQHVNNVKYIG 326 (419)
T ss_pred EEEEEEEEEECCCCcccCCCHHHHHhhhhcccccccccccccccCCccccccccceeeeeeecHHHCcccCccccHHHHH
Confidence 34568888887777765 4433 11133332 12211 111 023455999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEEEEEEeee--CC---cE-EEEEEEEEe
Q 015458 128 LFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGAS--GK---NG-MRRDWLIRS 201 (406)
Q Consensus 128 ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I~Twv~~~--g~---~~-~~Rdf~I~d 201 (406)
|+.|+.-. ++.+ ...+.++.|+|++...+||.|.+.+.+... +. .. ......+.
T Consensus 327 Wild~lP~----------------e~l~---~~~l~~i~I~Y~kE~~~gd~V~s~~~~~~~~~~~~~~~~~~~~~h~~~- 386 (419)
T PLN02370 327 WILESAPP----------------PIME---SHELAAITLEYRRECGRDSVLQSLTAVSGTGIGNLGTAGDVECQHLLR- 386 (419)
T ss_pred HHHhhCch----------------hhhh---cceEEEEEEEEcccCCCCCEEEEEEeecccccccccCCCcceEEEEEE-
Confidence 99995321 1111 123788999999999999999988775311 11 11 11122334
Q ss_pred cCCCcEEEEEEEEEEE
Q 015458 202 QATGHIFARATSTWVM 217 (406)
Q Consensus 202 ~~~Gevia~AtS~wVl 217 (406)
.++|++++++.+.|--
T Consensus 387 ~~dG~e~a~a~t~Wr~ 402 (419)
T PLN02370 387 LEDGAEIVRGRTEWRP 402 (419)
T ss_pred cCCCeEEEEEEEEEEE
Confidence 4799999999999964
No 24
>PRK10694 acyl-CoA esterase; Provisional
Probab=98.15 E-value=8.8e-05 Score=65.33 Aligned_cols=111 Identities=10% Similarity=0.024 Sum_probs=86.4
Q ss_pred EEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEe-EEeEeccCCCCCEEEEE
Q 015458 104 RQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRM-QVEIDHYPIWGEVVEID 182 (406)
Q Consensus 104 ~~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~-~Ie~~r~p~~gD~I~I~ 182 (406)
...+.+...+++..|.+.=..+|.|+.+++.-.+. .. .+-.++.+++ .|+|.+|.+.||.|++.
T Consensus 13 ~~~~~v~p~~~N~~g~lfGG~ll~~~D~~a~i~a~--------------~~-~~~~~vtv~vd~i~F~~Pv~~Gd~l~~~ 77 (133)
T PRK10694 13 VLRTLAMPADTNANGDIFGGWLMSQMDIGGAILAK--------------EI-AHGRVVTVRVEGMTFLRPVAVGDVVCCY 77 (133)
T ss_pred EEEEEcChhhcCCCCcEeHHHHHHHHHHHHHHHHH--------------HH-cCCceEEEEECceEECCCcccCcEEEEE
Confidence 45568999999999999999999999998765432 01 1224667777 77999999999999999
Q ss_pred EEEeeeCCcEEEEEEEEEec-----CCC--cEEEEEEEEEEEEecCCCceecCCH
Q 015458 183 TWVGASGKNGMRRDWLIRSQ-----ATG--HIFARATSTWVMMNQQTRRLSKIPA 230 (406)
Q Consensus 183 Twv~~~g~~~~~Rdf~I~d~-----~~G--evia~AtS~wVl~D~~tRRpvrIP~ 230 (406)
+++...|+.++.-..+++.. ..| ..++.+..++|.+|. .+||.++|+
T Consensus 78 a~V~~~g~sS~~v~v~v~~~~~~~~~~g~~~~~~~~~~tfVavd~-~g~p~~vp~ 131 (133)
T PRK10694 78 ARCVKTGTTSISINIEVWVKKVASEPIGQRYKATEALFTYVAVDP-EGKPRALPV 131 (133)
T ss_pred EEEEEccCceEEEEEEEEEeecccCCCCcEEEEEEEEEEEEEECC-CCCEEeCCC
Confidence 99999999998766666631 113 346677888888884 789999885
No 25
>cd03440 hot_dog The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated proteins also share the hotdog fold. These proteins have related, but distinct, catalytic activities that include metabolic roles such as thioester hydrolysis in fatty acid metabolism, and degradation of phenylacetic acid and the environmental pollutant 4-chlorobenzoate. This superfamily also includes the PaaI-like protein FapR, a non-catalytic bacterial homolog involved in transcriptional regulation of fatty acid biosynthesis.
Probab=98.04 E-value=4.2e-05 Score=57.83 Aligned_cols=65 Identities=12% Similarity=0.061 Sum_probs=54.4
Q ss_pred ceeeccccCccCCccchHHHHHHHHHhCCcchhc------cCceEEEEEEEecccCCCCeEEEEEEEcCCC
Q 015458 267 DLKPKRSDLDMNHHVNNVKYVRWMLETIPDRILE------SNQLSGITLEYRRECGGSDVVQSLCQPDEDG 331 (406)
Q Consensus 267 ~~~vR~sDiD~ngHVNN~~Y~~w~~e~lp~e~~~------~~~l~~i~i~Y~~E~~~gd~v~~~t~v~~~~ 331 (406)
.+.+++.|+|.++|+|+..|+.|+.++...-+.. ...+.++++.|++|++.||.+.+.+++...+
T Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~ 74 (100)
T cd03440 4 RLTVTPEDIDGGGIVHGGLLLALADEAAGAAAARLGGRGLGAVTLSLDVRFLRPVRPGDTLTVEAEVVRVG 74 (100)
T ss_pred EEEeCHHHcCcCCccchHHHHHHHHHHHHHHHHHhccCCCeEEEEEEEeEEecCCCCCCEEEEEEEEEecc
Confidence 4689999999999999999999999986433221 3456899999999999999999999987654
No 26
>cd03442 BFIT_BACH Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, and brown adipose tissues. The archeal and eukaryotic members of this family have two tandem copies of the conserved hot dog fold, while most bacterial members have only one copy.
Probab=98.00 E-value=6.1e-05 Score=63.32 Aligned_cols=66 Identities=12% Similarity=0.082 Sum_probs=52.7
Q ss_pred cceeeccccCccCCccchHHHHHHHHHhCCcchh---c-cCceEEE-EEEEecccCCCCeEEEEEEEcCCC
Q 015458 266 SDLKPKRSDLDMNHHVNNVKYVRWMLETIPDRIL---E-SNQLSGI-TLEYRRECGGSDVVQSLCQPDEDG 331 (406)
Q Consensus 266 ~~~~vR~sDiD~ngHVNN~~Y~~w~~e~lp~e~~---~-~~~l~~i-~i~Y~~E~~~gd~v~~~t~v~~~~ 331 (406)
..+.|++.|+|..||||+..|+.|+.++...-.. . ...+..+ +++|++|+..||.|.+.+++...+
T Consensus 10 ~~~~v~~~~~d~~g~v~~g~~~~~~d~a~~~~~~~~~~~~~~~~~~~~~~f~~p~~~gd~l~i~~~v~~~g 80 (123)
T cd03442 10 TRELVLPEDTNHHGTIFGGWLLEWMDELAGIAAYRHAGGRVVTASVDRIDFLKPVRVGDVVELSARVVYTG 80 (123)
T ss_pred EEEEeCCcccCcCCcEeHHHHHHHHHHHHHHHHHHHhCCcEEEEEECceEEcCccccCcEEEEEEEEEEec
Confidence 4689999999999999999999999998532111 1 1234566 799999999999999999987764
No 27
>PF12590 Acyl-thio_N: Acyl-ATP thioesterase; InterPro: IPR021113 This entry represents the N-terminal domain of acyl-ATP thioesterases from bacteria and eukaryotes. These proteins are typically between 120 and 131 amino acids in length. The plant acyl-acyl carrier protein (ACP) thioesterases (TEs) play an essential role in chain termination during de novo fatty acid synthesis [].; GO: 0016790 thiolester hydrolase activity
Probab=97.91 E-value=1.3e-06 Score=74.78 Aligned_cols=34 Identities=26% Similarity=0.192 Sum_probs=29.9
Q ss_pred ccccccceeeeehhhhhhccccccchhhccccCCCcccccc
Q 015458 49 HSQTTGVASTFVASVAAEKEGCRINEVQIRQNIPTKKQFVD 89 (406)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (406)
-||.+.++||||. |||||||+|||+++|+ ++|+|
T Consensus 96 WSMLLAAITTIFl--AAEKQW~mLDwKpkRP-----DML~D 129 (129)
T PF12590_consen 96 WSMLLAAITTIFL--AAEKQWTMLDWKPKRP-----DMLVD 129 (129)
T ss_pred HHHHHHHHHHHHH--HhhhhhhhhcccCCCc-----ccccC
Confidence 3678899999998 9999999999999998 66665
No 28
>PLN02647 acyl-CoA thioesterase
Probab=97.85 E-value=0.0019 Score=67.48 Aligned_cols=217 Identities=10% Similarity=0.000 Sum_probs=133.7
Q ss_pred EeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEE-eEEeEeccCCCCCEEEEEEEEe
Q 015458 108 VVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSR-MQVEIDHYPIWGEVVEIDTWVG 186 (406)
Q Consensus 108 ~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r-~~Ie~~r~p~~gD~I~I~Twv~ 186 (406)
.++-.++++.|.+....+|.+|.++|..-+... .. +- +.....+..|.+. -+|+|.+|.+.||.|.|...+.
T Consensus 99 ~l~~~y~N~~G~l~gG~LLe~mD~~A~~~A~rh--~~-~~----~~~~~p~~vVTAsVD~i~F~~Pi~~g~~v~l~g~Vt 171 (437)
T PLN02647 99 ILREQYRNPWNEVRIGKLLEDLDALAGTISVKH--CS-DD----DSTTRPLLLVTASVDKIVLKKPIRVDVDLKIVGAVT 171 (437)
T ss_pred hhchhhcCCCCcEeHhHHHHHHHHHHHHHHHHH--hC-CC----cccCCcceEEEEEECcEEEcCCCcCCcEEEEEEEEE
Confidence 667777999999999999999999876644211 10 10 1111223344443 3789999999999999999999
Q ss_pred eeCCcEEEEEEEEEecC------CCcEEEEEEEEEEEEecCCCceecCCHHHH------HhcCcccc---cccccc---c
Q 015458 187 ASGKNGMRRDWLIRSQA------TGHIFARATSTWVMMNQQTRRLSKIPAEVR------AEISPWFI---DKQAII---E 248 (406)
Q Consensus 187 ~~g~~~~~Rdf~I~d~~------~Gevia~AtS~wVl~D~~tRRpvrIP~evr------~~i~~~~~---~~~~~~---~ 248 (406)
..|+.+|.-.-.++... ...+++.|..++|.+|.+++||.++|+-.. ..+..... .++... .
T Consensus 172 ~vGrSSMEV~v~V~~~~~~~~~~~~~~~~~a~FtfVA~D~~~gkp~pVp~l~pete~Ek~~~e~a~~R~~~Rk~~r~~~~ 251 (437)
T PLN02647 172 WVGRSSMEIQLEVIQPTKDESNTSDSVALTANFTFVARDSKTGKSAPVNRLSPETEEEKLLFEEAEARNKLRKKKRGEQK 251 (437)
T ss_pred EecCCeEEEEEEEEEccccCCCCcEEEEEEEEEEEEEEcCCCCCeeeCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999997555555311 224688999999999987899998876321 00100000 000000 0
Q ss_pred --cCc----------------ccccCC-Ccc-----ccccccceeeccccCccCCccchHHHHHHHHHhCCcc--hhccC
Q 015458 249 --DVP----------------EKISKL-DDT-----AKYVNSDLKPKRSDLDMNHHVNNVKYVRWMLETIPDR--ILESN 302 (406)
Q Consensus 249 --~~~----------------~ki~kl-~~~-----~~~~~~~~~vR~sDiD~ngHVNN~~Y~~w~~e~lp~e--~~~~~ 302 (406)
..+ ...+.+ +.. .......+.+...|...+|.+.=-.-+.|+.|+...- .+...
T Consensus 252 ~~~~~~e~~~l~~l~~~~~~~~~~p~l~~~~~v~m~dT~~~~~~iv~P~d~N~~g~iFGG~LM~~~De~A~i~A~r~a~~ 331 (437)
T PLN02647 252 REFENGEAERLEALLAEGRVFCDMPALADRNSILIRDTRLENSLICQPQQRNIHGRIFGGFLMRRAFELAFSTAYAFAGL 331 (437)
T ss_pred ccCCchHHHHHHHHHHhccccccCcccCCccceeccccceEEEEEeCccccCCCCcEeHHHHHHHHHHHHHHHHHHHcCC
Confidence 000 000111 000 0011233456788888888888888889998863211 11122
Q ss_pred ce---EEEEEEEecccCCCCeEEEEEEEcCCC
Q 015458 303 QL---SGITLEYRRECGGSDVVQSLCQPDEDG 331 (406)
Q Consensus 303 ~l---~~i~i~Y~~E~~~gd~v~~~t~v~~~~ 331 (406)
.+ .--.++|++|+..||.|.+.+.+..-+
T Consensus 332 ~~vt~svd~v~F~~PV~vGdil~l~A~V~yt~ 363 (437)
T PLN02647 332 RPYFLEVDHVDFLRPVDVGDFLRFKSCVLYTE 363 (437)
T ss_pred ceEEEEecceEecCccccCcEEEEEEEEEEEe
Confidence 22 345689999999999999877665433
No 29
>COG1607 Acyl-CoA hydrolase [Lipid metabolism]
Probab=97.62 E-value=0.0021 Score=58.16 Aligned_cols=113 Identities=15% Similarity=0.124 Sum_probs=86.1
Q ss_pred EEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEEEEE
Q 015458 105 QTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTW 184 (406)
Q Consensus 105 ~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I~Tw 184 (406)
....+-..|++++|.+.=..+|.||.+++.--+.. ...+..--+.=-.|.|.+|.+.||.|.+.+|
T Consensus 16 ~~~lv~P~dtN~~g~ifGG~lm~~mD~~a~i~A~~--------------~a~~~vVTasvd~v~F~~Pv~vGd~v~~~a~ 81 (157)
T COG1607 16 LRTLVMPSDTNPNGTIFGGWLLSWMDLAAAIAASR--------------HAGGRVVTASVDSVDFKKPVRVGDIVCLYAR 81 (157)
T ss_pred EEEEecCCccCcccccccHHHHHHHHHHHHHHHHH--------------HhCCeEEEEEeceEEEccccccCcEEEEEEE
Confidence 67788899999999999999999999987655420 1112122222247999999999999999999
Q ss_pred EeeeCCcEEEEEEEEEe--c--CCCcEEEEEEEEEEEEecCCCceecCCHHH
Q 015458 185 VGASGKNGMRRDWLIRS--Q--ATGHIFARATSTWVMMNQQTRRLSKIPAEV 232 (406)
Q Consensus 185 v~~~g~~~~~Rdf~I~d--~--~~Gevia~AtS~wVl~D~~tRRpvrIP~ev 232 (406)
+...|+.++.-.-+++. . ........+..++|-+|-+ +||.++|++.
T Consensus 82 v~~~GrTSm~V~Vev~~~~~~~~~~~~~t~~~ft~VAvd~~-gkP~~vp~~~ 132 (157)
T COG1607 82 VVYTGRTSMEVGVEVWAEDIRSGERRLATSAYFTFVAVDED-GKPTPVPREE 132 (157)
T ss_pred EeecCcccEEEEEEEEEecccCCcceEeeeEEEEEEEECCC-CCcccCCccC
Confidence 99999999976555543 1 2234566788888889976 9999999854
No 30
>TIGR00369 unchar_dom_1 uncharacterized domain 1. Most proteins containing this domain consist almost entirely of a single copy of this domain. A protein from C. elegans consists of two tandem copies of the domain. The domain is also found as the N-terminal region of an apparent initiation factor eIF-2B alpha subunit of Aquifex aeolicus. The function of the domain is unknown.
Probab=97.55 E-value=0.0034 Score=53.16 Aligned_cols=98 Identities=13% Similarity=-0.018 Sum_probs=78.8
Q ss_pred EEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEEEE
Q 015458 104 RQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDT 183 (406)
Q Consensus 104 ~~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I~T 183 (406)
+..+.++...+++.|.++=..++.+++.++..-... ....+...+.+.++|+|.+|+.-| .|+++.
T Consensus 19 ~~~~~v~~~~~n~~g~vhGG~l~~l~D~a~~~a~~~-------------~~~~~~~~vt~~l~i~f~~p~~~g-~l~a~a 84 (117)
T TIGR00369 19 EATMPVDERTLQPFGSLHGGVSAALADTAGSAAGYL-------------CNSGGQAVVGLELNANHLRPAREG-KVRAIA 84 (117)
T ss_pred EEEEEcCHHHcCCcccChHHHHHHHHHHHHHHHHHh-------------hcCCCceEEEEEEEeeeccccCCC-EEEEEE
Confidence 567888888899999999999999998876322210 011234556778999999999999 999999
Q ss_pred EEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEE
Q 015458 184 WVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (406)
Q Consensus 184 wv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wV 216 (406)
++.+.|+..+.-+-+++| ++|++++.|++++.
T Consensus 85 ~v~~~gr~~~~~~~~i~~-~~g~~va~~~~t~~ 116 (117)
T TIGR00369 85 QVVHLGRQTGVAEIEIVD-EQGRLCALSRGTTA 116 (117)
T ss_pred EEEecCceEEEEEEEEEC-CCCCEEEEEEEEEc
Confidence 999999988777788887 68999999999874
No 31
>COG3884 FatA Acyl-ACP thioesterase [Lipid metabolism]
Probab=97.49 E-value=0.00039 Score=66.19 Aligned_cols=88 Identities=13% Similarity=-0.026 Sum_probs=67.8
Q ss_pred eEEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEE
Q 015458 102 GYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEI 181 (406)
Q Consensus 102 ~f~~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I 181 (406)
.+...|.||++|+|.+|||||+.|.+|+.|.-..|+. ...+ ..++.++|.++.+.||+|+|
T Consensus 152 s~~~~f~vR~~DID~f~HvNNskY~~wi~e~l~~~~~---------------~~~~----p~r~~l~y~keva~G~~iti 212 (250)
T COG3884 152 SEIHDFPVRYTDIDMFGHVNNSKYWSWIEEVLGSEFL---------------KLYG----PLRLTLEYVKEVAPGEKITI 212 (250)
T ss_pred cccccceeEEEeeccccccccceehHHHHHHHhhhhH---------------hhcc----cceeEEEEEcccCCCCeEEE
Confidence 5667899999999999999999999999997665542 1111 35889999999999999999
Q ss_pred EEEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEE
Q 015458 182 DTWVGASGKNGMRRDWLIRSQATGHIFARATSTW 215 (406)
Q Consensus 182 ~Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~w 215 (406)
.+.....+..- .+- .+|.+.+-+-.+|
T Consensus 213 ~~e~~~~~s~~-----~f~--~d~~v~~lt~i~~ 239 (250)
T COG3884 213 VYEVHPLESKH-----QFT--SDGQVNALTYIVG 239 (250)
T ss_pred EEEEcccCcee-----eec--CCcceEEEEEEEe
Confidence 99987665432 111 3777777766665
No 32
>PF03061 4HBT: Thioesterase superfamily; InterPro: IPR006683 This family contains a wide variety of enzymes, principally thioesterases. This family includes 4HBT (3.1.2.23 from EC) which catalyses the final step in the biosynthesis of 4-hydroxybenzoate from 4-chlorobenzoate in the soil dwelling microbe Pseudomonas CBS-3. This family includes various cytosolic long-chain acyl-CoA thioester hydrolases. Long-chain acyl-CoA hydrolases hydrolyse palmitoyl-CoA to CoA and palmitate, they also catalyse the hydrolysis of other long chain fatty acyl-CoA thioesters. ; PDB: 3F5O_F 2F0X_D 2H4U_C 2PRX_A 2OV9_D 1YLI_B 3BJK_F 1IXL_A 3DKZ_B 2EIS_B ....
Probab=97.48 E-value=0.00017 Score=55.78 Aligned_cols=57 Identities=12% Similarity=0.119 Sum_probs=44.7
Q ss_pred CCccchHHHHHHHHHhCCcchh------ccCceEEEEEEEecccCCCCeEEEEEEEcCCCeee
Q 015458 278 NHHVNNVKYVRWMLETIPDRIL------ESNQLSGITLEYRRECGGSDVVQSLCQPDEDGILK 334 (406)
Q Consensus 278 ngHVNN~~Y~~w~~e~lp~e~~------~~~~l~~i~i~Y~~E~~~gd~v~~~t~v~~~~~~s 334 (406)
||||||..|+.|++++...-+. ....+.+++++|++|++.||.+.+.+++...|.++
T Consensus 1 ~G~v~~g~~~~~~d~a~~~~~~~~~~~~~~~~~~~~~i~f~~p~~~gd~l~~~~~v~~~g~~~ 63 (79)
T PF03061_consen 1 NGIVHGGVYLSLFDEAASAALRSHGGDGRGVVTVELSIDFLRPVRPGDTLRVEARVVRVGRKS 63 (79)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHHHHSSTEEEEEEEEEEEESS-BBTTSEEEEEEEEEEEESSE
T ss_pred CCEEhHHHHHHHHHHHHHHHHHHhccCCcceEEEEEEEEEccccCCCeEEEEEEEEEEECCEE
Confidence 7999999999999998532111 12356899999999999999999999998766543
No 33
>TIGR02286 PaaD phenylacetic acid degradation protein PaaD. Sequences scoring between trusted and noise include those from archaea and other species not known to catabolize phenylacetic acid and which are not adjacent to other genes potentially involved with such a pathway.
Probab=97.33 E-value=0.011 Score=49.83 Aligned_cols=97 Identities=16% Similarity=0.036 Sum_probs=77.6
Q ss_pred EEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEEEE
Q 015458 104 RQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDT 183 (406)
Q Consensus 104 ~~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I~T 183 (406)
...+.++-..+++.|.++=..++.+++.++...+. . .+..-+....+++|.+|...||.|.++.
T Consensus 17 ~~~l~~~~~~~n~~g~~HGG~i~al~D~~~~~~~~-----~-----------~~~~~~t~~~~i~f~rp~~~G~~l~~~a 80 (114)
T TIGR02286 17 RVAMTVRADMLNGHGTAHGGFLFSLADSAFAYACN-----S-----------YGDAAVAAQCTIDFLRPGRAGERLEAEA 80 (114)
T ss_pred EEEEECCHHHcCcCCCchHHHHHHHHHHHHHHHhc-----C-----------CCCceEEEEEEEEEecCCCCCCEEEEEE
Confidence 34788888899999999999999999988543321 0 0111245678999999999999999999
Q ss_pred EEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEEE
Q 015458 184 WVGASGKNGMRRDWLIRSQATGHIFARATSTWVM 217 (406)
Q Consensus 184 wv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wVl 217 (406)
++.+.|+.....+-.|++ ++|++++.++.+|-.
T Consensus 81 ~v~~~g~~~~~~~~~i~~-~~~~~va~~~~t~~~ 113 (114)
T TIGR02286 81 VEVSRGGRTGTYDVEVVN-QEGELVALFRGTSRR 113 (114)
T ss_pred EEEEeCCcEEEEEEEEEc-CCCCEEEEEEEEEEE
Confidence 999998877777778887 789999999999864
No 34
>cd03443 PaaI_thioesterase PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).
Probab=96.99 E-value=0.0078 Score=49.67 Aligned_cols=66 Identities=12% Similarity=0.015 Sum_probs=53.1
Q ss_pred ccceeeccccCccCCccchHHHHHHHHHhCCcchh------ccCceEEEEEEEecccCCCCeEEEEEEEcCCC
Q 015458 265 NSDLKPKRSDLDMNHHVNNVKYVRWMLETIPDRIL------ESNQLSGITLEYRRECGGSDVVQSLCQPDEDG 331 (406)
Q Consensus 265 ~~~~~vR~sDiD~ngHVNN~~Y~~w~~e~lp~e~~------~~~~l~~i~i~Y~~E~~~gd~v~~~t~v~~~~ 331 (406)
+..+++.+.+.|..|+|++..|..|++.+...-.. ....+.+++++|++|+.. +.+.+.+++...+
T Consensus 15 ~~~~~~~~~~~n~~g~vhgg~l~~l~d~a~~~~~~~~~~~~~~~~~~~~~i~f~~p~~~-~~v~~~~~v~~~g 86 (113)
T cd03443 15 VLRLPVRPRHLNPGGIVHGGAIATLADTAGGLAALSALPPGALAVTVDLNVNYLRPARG-GDLTARARVVKLG 86 (113)
T ss_pred EEEeeCcHhhcCCCCeEeHHHHHHHHHHHHHHHHhhccCCCCceEEEEEEEeEEcCCCC-CeEEEEEEEEecC
Confidence 44678899999999999999999999998642111 123468999999999999 9999999887654
No 35
>PRK10293 acyl-CoA esterase; Provisional
Probab=96.65 E-value=0.084 Score=46.60 Aligned_cols=100 Identities=12% Similarity=-0.084 Sum_probs=79.9
Q ss_pred EEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEEEE
Q 015458 104 RQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDT 183 (406)
Q Consensus 104 ~~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I~T 183 (406)
+.++.|+-..+.+.|.++=..++.+++-++..... . ....+...+-..++++|.+|.+-| .|..+-
T Consensus 37 ~~~~~v~~~~~n~~G~lHGGv~~tLaD~a~~~a~~---------~----~~~~~~~~vTiel~infl~p~~~g-~l~a~a 102 (136)
T PRK10293 37 EATMPVDSRTKQPFGLLHGGASVVLAESIGSVAGY---------L----CTEGEQKVVGLEINANHVRSAREG-RVRGVC 102 (136)
T ss_pred EEEEEcCHHHcCCcCcccHHHHHHHHHHHHHHHHH---------h----cccCCceEEEEEEEeEEecccCCc-eEEEEE
Confidence 45677777889999999999999999876533221 0 112355677889999999999877 699999
Q ss_pred EEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEEEE
Q 015458 184 WVGASGKNGMRRDWLIRSQATGHIFARATSTWVMM 218 (406)
Q Consensus 184 wv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wVl~ 218 (406)
++...|+.-+.-+-+++| ++|++++.++.+|.++
T Consensus 103 ~vv~~Gr~~~~~~~~v~d-~~g~l~A~~~~t~~i~ 136 (136)
T PRK10293 103 KPLHLGSRHQVWQIEIFD-EKGRLCCSSRLTTAIL 136 (136)
T ss_pred EEEecCCCEEEEEEEEEe-CCCCEEEEEEEEEEEC
Confidence 999999988888889997 7999999999999764
No 36
>PRK11688 hypothetical protein; Provisional
Probab=96.48 E-value=0.1 Score=46.67 Aligned_cols=110 Identities=12% Similarity=0.042 Sum_probs=76.2
Q ss_pred EEEEEeeecCCC--CCCCcCHHHHHHHHHHHHHHHHHhhccccCCC-Cccc-ccccCCeEEEEEEeEEeEeccCCCCCEE
Q 015458 104 RQTVVVRSYEVG--PDKTATLESILNLFQETALNHVWMSGLLSNGF-GATH-GMMRNNLIWVVSRMQVEIDHYPIWGEVV 179 (406)
Q Consensus 104 ~~~~~VR~~E~D--~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gf-g~~~-~m~~~gl~WVV~r~~Ie~~r~p~~gD~I 179 (406)
...+.++-..++ +.|.++=..++.+++.+...-+... .. .+. +..+ ........-+-+.++++|.+|.+ |+.|
T Consensus 40 ~~~l~~~~~~~~n~~~G~vHGG~i~tl~D~a~g~a~~~~-~~-~~~~~~~~~~~~~~~~~~vTi~l~i~fl~p~~-g~~l 116 (154)
T PRK11688 40 ELSFKMQPELVGNIAQSILHGGVIASVLDVAGGLVCVGG-IL-ARHEDISEEELRQRLSRLGTIDLRVDYLRPGR-GERF 116 (154)
T ss_pred EEEeeCCHHHcCCCCcCeeeHHHHHHHHHHHHHHHHHhh-cc-cccccccccccccccccceEEEEEEEeeccCC-CCeE
Confidence 355677777775 5789998899988887765443211 00 000 0000 00011123356799999999996 9999
Q ss_pred EEEEEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEEE
Q 015458 180 EIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVM 217 (406)
Q Consensus 180 ~I~Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wVl 217 (406)
+++.++.+.|+.-+.-+-+|++ ++|+++|+++.+|..
T Consensus 117 ~a~a~v~~~g~r~~~~~~~i~~-~~g~lvA~a~~t~~v 153 (154)
T PRK11688 117 TATSSVLRAGNKVAVARMELHN-EQGVHIASGTATYLV 153 (154)
T ss_pred EEEEEEEEccCCEEEEEEEEEC-CCCCEEEEEEEEEEe
Confidence 9999999999887776778887 689999999999864
No 37
>PRK10254 thioesterase; Provisional
Probab=96.39 E-value=0.22 Score=44.04 Aligned_cols=100 Identities=10% Similarity=-0.045 Sum_probs=80.4
Q ss_pred EEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEEEE
Q 015458 104 RQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDT 183 (406)
Q Consensus 104 ~~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I~T 183 (406)
+..+.++...+.+.|.++=..++.+++.|+...+. .....+...+-..++++|.||.+-| .|..+.
T Consensus 37 ~~~l~v~~~~~n~~G~vHGGv~~tLaD~a~g~A~~-------------~~~~~g~~~vTiel~in~Lrp~~~g-~l~a~a 102 (137)
T PRK10254 37 EAEMPVDTRTHQPFGLLHGGASAALAETLGSMAGF-------------LMTRDGQCVVGTELNATHHRPVSEG-KVRGVC 102 (137)
T ss_pred EEEEEcCccccCCCCcchHHHHHHHHHHHHHHHHH-------------hhCCCCCeEEEEEEEeEEeccCcCC-eEEEEE
Confidence 45567777788899999999999999887644321 0123466788999999999999766 799999
Q ss_pred EEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEEEE
Q 015458 184 WVGASGKNGMRRDWLIRSQATGHIFARATSTWVMM 218 (406)
Q Consensus 184 wv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wVl~ 218 (406)
.+.+.|+.-...+-+|+| ++|++++.++.+..++
T Consensus 103 ~vi~~Gr~~~v~~~~v~d-~~g~l~a~~~~t~~i~ 136 (137)
T PRK10254 103 QPLHLGRQNQSWEIVVFD-EQGRRCCTCRLGTAVL 136 (137)
T ss_pred EEEecCcCEEEEEEEEEc-CCCCEEEEEEEEEEEe
Confidence 999999988877889997 7999999999887664
No 38
>COG2050 PaaI HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.21 E-value=0.18 Score=44.27 Aligned_cols=104 Identities=14% Similarity=0.099 Sum_probs=83.1
Q ss_pred EEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEEE
Q 015458 103 YRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEID 182 (406)
Q Consensus 103 f~~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I~ 182 (406)
-+..+.+.-....+.|.++=..++.+++.++...+... ......-+-..++|+|.||.+-|+ |..+
T Consensus 36 ~~~~l~~~~~~~~~~G~~HGG~i~alaD~a~~~a~~~~-------------~~~~~~~~ti~l~i~flr~~~~g~-v~a~ 101 (141)
T COG2050 36 AEATLPVDPELLNPGGILHGGVIAALADSAAGLAANSL-------------LGVVALAVTLELNINFLRPVKEGD-VTAE 101 (141)
T ss_pred EEEEeecCHHHcCCCceeeHHHHHHHHHHHHHHHHhhc-------------cCccceeEEEEEEehhccCCCCCe-EEEE
Confidence 35667777778888999999999999999876654310 011112277899999999999999 9999
Q ss_pred EEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEEEEec
Q 015458 183 TWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQ 220 (406)
Q Consensus 183 Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wVl~D~ 220 (406)
..+...|+.-...+.+++++..|++++.++.++..++.
T Consensus 102 a~v~~~G~~~~v~~i~v~~~~~~~lva~~~~t~~v~~~ 139 (141)
T COG2050 102 ARVLHLGRRVAVVEIEVKNDEGGRLVAKGTGTYAVLRK 139 (141)
T ss_pred EEEEeeCCEEEEEEEEEEECCCCeEEEEEEEEEEEecC
Confidence 99999999988788889865677999999999998875
No 39
>COG5496 Predicted thioesterase [General function prediction only]
Probab=96.17 E-value=0.21 Score=43.57 Aligned_cols=110 Identities=14% Similarity=0.153 Sum_probs=83.6
Q ss_pred cCceeEEEEEEeeecCCCCC-------CCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEe
Q 015458 98 EGGVGYRQTVVVRSYEVGPD-------KTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEID 170 (406)
Q Consensus 98 ~~g~~f~~~~~VR~~E~D~~-------G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~ 170 (406)
.+|+.++.++.|+-..+++- ..+--+.++.||++|+...+. .....|.+-|-+...+.-.
T Consensus 2 ~~g~~~e~~~lv~dn~t~~~~~~~~~~~VlATp~mi~~~E~a~~el~~-------------~~Ld~g~ttVG~ev~vrHl 68 (130)
T COG5496 2 MDGLTLEGEFLVRDNHTVPPAEGSGMLNVLATPAMIGFMENASYELLQ-------------PYLDNGETTVGTEVLVRHL 68 (130)
T ss_pred CCceeeEEEEEecccccCchhHhCCccceeehHHHHHHHHHHHHHHHH-------------hhCcCCcceeeEEEEeeec
Confidence 46788899999998888831 123334677889998766542 1234588889999999999
Q ss_pred ccCCCCCEEEEEEEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEEEEecCC
Q 015458 171 HYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQT 222 (406)
Q Consensus 171 r~p~~gD~I~I~Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wVl~D~~t 222 (406)
.+.--|..|+|.+.+.+..+.... |.|+-..+|+.+.+++-+-+.+|.++
T Consensus 69 a~~~~G~~V~i~~~l~~v~Gr~v~--f~i~a~~~~~~Ig~g~h~R~iv~~~k 118 (130)
T COG5496 69 AATPPGLTVTIGARLEKVEGRKVK--FRIIAMEGGDKIGEGTHTRVIVPREK 118 (130)
T ss_pred cCCCCCCeEEEEEEEEEEeccEEE--EEEEEeeCCcEEeeeEEEEEEecHHH
Confidence 999999999999999988666554 34444468999999999988888653
No 40
>KOG3328 consensus HGG motif-containing thioesterase [General function prediction only]
Probab=95.72 E-value=0.13 Score=46.05 Aligned_cols=100 Identities=21% Similarity=0.106 Sum_probs=80.9
Q ss_pred EEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEEEE
Q 015458 104 RQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDT 183 (406)
Q Consensus 104 ~~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I~T 183 (406)
..+++|.-..++++|.+.-...+.+.+..+..-+- |......-|-+.++|.|..+...||.|.|+.
T Consensus 40 ~ce~kV~~~~~N~~k~LHGG~tAtLvD~i~s~~~~--------------~~~~~~~gvsvdLsvsyL~~AklGe~l~i~a 105 (148)
T KOG3328|consen 40 SCELKVTPDHLNRFKTLHGGATATLVDLITSAALL--------------MTSGFKPGVSVDLSVSYLSSAKLGEELEIEA 105 (148)
T ss_pred EEEEEeCHHHcCccccccccchhhHHHHHhhHHHH--------------hccCCCCceEEEEEhhhccccCCCCeEEEEE
Confidence 57899999999999999999888888876654321 1122234567899999999999999999999
Q ss_pred EEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEEE
Q 015458 184 WVGASGKNGMRRDWLIRSQATGHIFARATSTWVM 217 (406)
Q Consensus 184 wv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wVl 217 (406)
.+.+.|+.-..-+-+++...+|++++.++-+-.+
T Consensus 106 ~~vr~Gk~la~t~v~l~~K~t~kiia~grhtk~~ 139 (148)
T KOG3328|consen 106 TVVRVGKTLAFTDVELRRKSTGKIIAKGRHTKYF 139 (148)
T ss_pred EEeecCceEEEEEEEEEEcCCCeEEEecceEEEe
Confidence 9999999987777788877889999998766554
No 41
>cd03449 R_hydratase (R)-hydratase [(R)-specific enoyl-CoA hydratase] catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. (R)-hydratase contains a hot-dog fold similar to those of thioesterase II, and beta-hydroxydecanoyl-ACP dehydratase, MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit. The active site lies within a substrate-binding tunnel formed by the (R)-hydratase homodimer. A subset of the bacterial (R)-hydratases contain a C-terminal phosphotransacetylase (PTA) domain.
Probab=95.39 E-value=0.21 Score=42.11 Aligned_cols=56 Identities=7% Similarity=0.029 Sum_probs=45.0
Q ss_pred EEEEEEeEEeEeccCCCCCEEEEEEEEeeeCC--cEEEEEEEEEecCCCcEEEEEEEEE
Q 015458 159 IWVVSRMQVEIDHYPIWGEVVEIDTWVGASGK--NGMRRDWLIRSQATGHIFARATSTW 215 (406)
Q Consensus 159 ~WVV~r~~Ie~~r~p~~gD~I~I~Twv~~~g~--~~~~Rdf~I~d~~~Gevia~AtS~w 215 (406)
..+....+++|.+|...||+|.++.++.+... ..+.....+.+ ++|+++++++.+.
T Consensus 69 ~~~~~~~~~~f~~Pv~~gd~l~~~~~v~~~~~~~~~v~~~~~~~~-~~g~~v~~g~~~~ 126 (128)
T cd03449 69 GTIYLSQSLRFLRPVFIGDTVTATVTVTEKREDKKRVTLETVCTN-QNGEVVIEGEAVV 126 (128)
T ss_pred eEEEEEEEEEECCCccCCCEEEEEEEEEEEecCCCEEEEEEEEEe-CCCCEEEEEEEEE
Confidence 55667899999999999999999999976644 45555667776 6899999988754
No 42
>PLN02322 acyl-CoA thioesterase
Probab=94.73 E-value=1.5 Score=39.63 Aligned_cols=102 Identities=10% Similarity=-0.078 Sum_probs=77.1
Q ss_pred EEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEEEE
Q 015458 104 RQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDT 183 (406)
Q Consensus 104 ~~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I~T 183 (406)
+.++.|+...+.+.|.++=..++.+++-|+. .+.. ....+...+-+.++|+|.+|.+.||.|..+-
T Consensus 29 ~~~m~v~~~~~N~~G~vHGGv~atLaDta~g-~A~~-------------~~~~~~~~vTiel~infLrpa~~G~~L~Aea 94 (154)
T PLN02322 29 TGRLPVSPMCCQPFKVLHGGVSALIAESLAS-LGAH-------------MASGFKRVAGIQLSINHLKSADLGDLVFAEA 94 (154)
T ss_pred EEEEECCHHHcCCCCCccHHHHHHHHHHHHH-HHHh-------------hccCCCceEEEEEEEEEeccCCCCCEEEEEE
Confidence 3556677777999999999999999976543 2110 0112234678899999999999999999999
Q ss_pred EEeeeCCcEEEEEEEEEec----C-CCcEEEEEEEEEEEEe
Q 015458 184 WVGASGKNGMRRDWLIRSQ----A-TGHIFARATSTWVMMN 219 (406)
Q Consensus 184 wv~~~g~~~~~Rdf~I~d~----~-~Gevia~AtS~wVl~D 219 (406)
++...|+.-...+-+|++. + +|.+++.++.+..++.
T Consensus 95 ~vv~~Gr~~~~~ev~V~~~~~~~~~~~~lva~a~~T~~~~~ 135 (154)
T PLN02322 95 TPVSTGKTIQVWEVKLWKTTDKDKANKILISSSRVTLICNL 135 (154)
T ss_pred EEEecCCCEEEEEEEEEECCCCcccCCeEEEEEEEEEEEcc
Confidence 9999999887777788873 1 3789999998876543
No 43
>PF14539 DUF4442: Domain of unknown function (DUF4442); PDB: 1YOC_B 1SH8_B.
Probab=93.55 E-value=1.7 Score=37.94 Aligned_cols=99 Identities=13% Similarity=0.062 Sum_probs=64.7
Q ss_pred eEEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEE
Q 015458 102 GYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEI 181 (406)
Q Consensus 102 ~f~~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I 181 (406)
.....++.++.--+..|.++-.+++...+-+....+.. ....+..|++..++|+|.+|.+ ..|..
T Consensus 30 ~~~v~l~~~~~~~N~~gt~h~gAl~~laE~~~g~~~~~-------------~l~~~~~~~~k~~~i~f~kpa~--g~v~a 94 (132)
T PF14539_consen 30 RVVVRLPLRPRNRNHVGTIHAGALFTLAEPAYGLLLMS-------------NLGDKYRVWDKSAEIDFLKPAR--GDVTA 94 (132)
T ss_dssp EEEEEE-S-CCGB-TTSSB-HHHHHHHHHCHHHHHHHH-------------HS-TTEEEEEEEEEEEE-S-----S-EEE
T ss_pred EEEEEEcCCccccCcCcchHHHHHHHHHHHHHHHHHHH-------------hCCCcEEEEEEeeEEEEEeccC--CcEEE
Confidence 45677888888899999999999999999887665421 1122778889999999999964 34555
Q ss_pred EEEEee--eC-CcEEEEEEEEEecCCCcEEEEEEEEEE
Q 015458 182 DTWVGA--SG-KNGMRRDWLIRSQATGHIFARATSTWV 216 (406)
Q Consensus 182 ~Twv~~--~g-~~~~~Rdf~I~d~~~Gevia~AtS~wV 216 (406)
+..+.. .+ +.....+..|+| ++|+++++++.+|.
T Consensus 95 ~~~~~~e~~~~~~~~~~~v~i~D-~~G~~Va~~~~t~~ 131 (132)
T PF14539_consen 95 TAELTEEQIGERGELTVPVEITD-ADGEVVAEATITWY 131 (132)
T ss_dssp EEE-TCCHCCHEEEEEEEEEEEE-TTC-EEEEEEEEEE
T ss_pred EEEcCHHHhCCCcEEEEEEEEEE-CCCCEEEEEEEEEE
Confidence 554432 33 334455677887 89999999999995
No 44
>PLN02647 acyl-CoA thioesterase
Probab=93.32 E-value=2.1 Score=45.02 Aligned_cols=115 Identities=8% Similarity=0.017 Sum_probs=80.0
Q ss_pred EEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEEE
Q 015458 103 YRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEID 182 (406)
Q Consensus 103 f~~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I~ 182 (406)
-...+.+...|....|.+.=..+|.++.|+|.--+. ....+..-.+.=-.|+|.+|...||.|.++
T Consensus 291 ~~~~~iv~P~d~N~~g~iFGG~LM~~~De~A~i~A~--------------r~a~~~~vt~svd~v~F~~PV~vGdil~l~ 356 (437)
T PLN02647 291 LENSLICQPQQRNIHGRIFGGFLMRRAFELAFSTAY--------------AFAGLRPYFLEVDHVDFLRPVDVGDFLRFK 356 (437)
T ss_pred eEEEEEeCccccCCCCcEeHHHHHHHHHHHHHHHHH--------------HHcCCceEEEEecceEecCccccCcEEEEE
Confidence 446677889999999999999999999998764432 111222333444689999999999999986
Q ss_pred EEEee-----eCCcEEEEEEE--EEec--CCCcEEEEEEEEEEEEec-CCCceecCCHH
Q 015458 183 TWVGA-----SGKNGMRRDWL--IRSQ--ATGHIFARATSTWVMMNQ-QTRRLSKIPAE 231 (406)
Q Consensus 183 Twv~~-----~g~~~~~Rdf~--I~d~--~~Gevia~AtS~wVl~D~-~tRRpvrIP~e 231 (406)
..+.. .|+.++.-+-. +.+. .+++++..+..++|..|. ..++|+++|+-
T Consensus 357 A~V~yt~~~s~g~~~i~veV~v~v~~~~~~~~~~~n~~~fTfva~d~~~~g~p~~Vp~V 415 (437)
T PLN02647 357 SCVLYTELENSEQPLINVEVVAHVTRPELRSSEVSNTFYFTFTVRPEAAMKNGFKIRNV 415 (437)
T ss_pred EEEEEEeEEecCceEEEEEEEEEEEcCCCCcceEEEEEEEEEEEeccccCCCCccCCee
Confidence 65543 44455543322 2232 345678889999999886 36788888763
No 45
>cd00556 Thioesterase_II Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=92.85 E-value=0.68 Score=37.08 Aligned_cols=58 Identities=12% Similarity=0.014 Sum_probs=50.1
Q ss_pred eEEEEEEeEEeEeccCCCCCEEEEEEEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEE
Q 015458 158 LIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (406)
Q Consensus 158 l~WVV~r~~Ie~~r~p~~gD~I~I~Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wV 216 (406)
..-+...+++.|.+++.-++.+..+.++...|+....+.-++++ ++|++++.+.....
T Consensus 41 ~~~~t~~~~i~F~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~-~~G~lva~~~~~~~ 98 (99)
T cd00556 41 SGFASLDHHIYFHRPGDADEWLLYEVESLRDGRSRALRRGRAYQ-RDGKLVASATQSFL 98 (99)
T ss_pred CCeeeeEEEEEEcCCCCCCccEEEEEEecccCCCceEEEEEEEC-CCCcEEEEEEEeEc
Confidence 34567789999999999999999999999999988888888886 67999999987653
No 46
>cd03455 SAV4209 SAV4209 is a Streptomyces avermitilis protein with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The alpha- and gamma-proteobacterial members of this CD have, in addition to a hot dog fold, an N-terminal extension.
Probab=92.44 E-value=1.1 Score=38.20 Aligned_cols=55 Identities=15% Similarity=0.119 Sum_probs=42.6
Q ss_pred EEEEEeEEeEeccCCCCCEEEEEEEEeeeCCc-EEEEEEEEEecCCCcEEEEEEEEE
Q 015458 160 WVVSRMQVEIDHYPIWGEVVEIDTWVGASGKN-GMRRDWLIRSQATGHIFARATSTW 215 (406)
Q Consensus 160 WVV~r~~Ie~~r~p~~gD~I~I~Twv~~~g~~-~~~Rdf~I~d~~~Gevia~AtS~w 215 (406)
..+.+++++|.+|...||+|+++.++.+.... ......++.+ ++|+++++++.+.
T Consensus 67 ~~~~~~~~rf~~pv~~Gdtl~~~~~v~~~~~~~~v~~~~~~~n-q~G~~v~~g~a~v 122 (123)
T cd03455 67 ARVKSFAFRLGAPLYAGDTLRFGGRVTAKRDDEVVTVELWARN-SEGDHVMAGTATV 122 (123)
T ss_pred ceEEEEEEEeeccccCCCEEEEEEEEEeeccCcEEEEEEEEEc-CCCCEEEeEEEEE
Confidence 34567799999999999999999999765332 4455667776 7999998888653
No 47
>cd01288 FabZ FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid biosynthesis pathway.
Probab=91.91 E-value=1.6 Score=36.95 Aligned_cols=59 Identities=8% Similarity=0.064 Sum_probs=46.5
Q ss_pred CeEEEEEEeEEeEeccCCCCCEEEEEEEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEEE
Q 015458 157 NLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVM 217 (406)
Q Consensus 157 gl~WVV~r~~Ie~~r~p~~gD~I~I~Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wVl 217 (406)
+..+.+.-.+++|.+|+.-||.|+++.++...+......+..++ .+|+++++|+...+.
T Consensus 72 ~~~~l~~~~~~kf~~pv~pgd~l~i~~~v~~~~~~~~~~~~~~~--~~g~~v~~~~~~~~~ 130 (131)
T cd01288 72 KLVYFAGIDKARFRKPVVPGDQLILEVELLKLRRGIGKFKGKAY--VDGKLVAEAELMFAI 130 (131)
T ss_pred cEEEEeeecccEEccccCCCCEEEEEEEEEEeeCCEEEEEEEEE--ECCEEEEEEEEEEEE
Confidence 45555656899999999999999999999877665555555665 489999999887765
No 48
>PRK13691 (3R)-hydroxyacyl-ACP dehydratase subunit HadC; Provisional
Probab=91.79 E-value=2.6 Score=38.47 Aligned_cols=61 Identities=8% Similarity=0.009 Sum_probs=46.0
Q ss_pred EEEEeEEeEeccCCCCCEEEEEEEEeeeC----CcEEEEEEEEEecCCCcEEEEEEEEEEEEecCC
Q 015458 161 VVSRMQVEIDHYPIWGEVVEIDTWVGASG----KNGMRRDWLIRSQATGHIFARATSTWVMMNQQT 222 (406)
Q Consensus 161 VV~r~~Ie~~r~p~~gD~I~I~Twv~~~g----~~~~~Rdf~I~d~~~Gevia~AtS~wVl~D~~t 222 (406)
+-...+++|.+|.+.||+|+++..+.... +-.......+.| ++|++++++..+++.-+-+.
T Consensus 85 v~~~q~~~f~rPV~~GDtL~~~~~V~~~~~~~~~g~V~~~~~~~N-Q~Ge~V~~~~~~~~~~~~~~ 149 (166)
T PRK13691 85 VQVDQRFVFHKPVLAGDKLWARMDIHSVDERFGADIVVTRNVCTN-DDGELVMEAYTTLMGQQGDN 149 (166)
T ss_pred eeeeeEEEEeCCcCCCCEEEEEEEEEEEEEcCCCcEEEEEEEEEC-CCCCEEEEEEEEEEEecCCC
Confidence 44557889999999999999999986552 123455567776 89999999998776665433
No 49
>COG4109 Predicted transcriptional regulator containing CBS domains [Transcription]
Probab=91.47 E-value=1 Score=45.88 Aligned_cols=104 Identities=19% Similarity=0.122 Sum_probs=84.7
Q ss_pred ceecCceeEEEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCC
Q 015458 95 LIIEGGVGYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPI 174 (406)
Q Consensus 95 ~~~~~g~~f~~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~ 174 (406)
.+.+.+--+...++|...-++..|.+++..+..++.++....+. ... +--.++=.+.+-|.+|..
T Consensus 325 ~l~e~~~~~~~t~~V~P~M~n~~Gtis~gv~~~ll~e~~qr~l~-------------k~~--~~niiIE~i~iyflk~vq 389 (432)
T COG4109 325 NLSEKGDEYGVTVEVEPQMINSLGTISNGVFTELLTEVVQRVLR-------------KKK--KRNIIIENITIYFLKPVQ 389 (432)
T ss_pred hhhhhccccceEEEechhhccccccchHHHHHHHHHHHHHHHHH-------------Hhc--CCceEEEeeeeeeeccee
Confidence 34455556667788999999999999999999999998766543 122 234567789999999999
Q ss_pred CCCEEEEEEEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEE
Q 015458 175 WGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTW 215 (406)
Q Consensus 175 ~gD~I~I~Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~w 215 (406)
..+.|+|...+-..||.+..-+++|+. +|++++.|-...
T Consensus 390 id~~l~I~prIl~~gR~~a~idvei~~--~~~ivaKAiv~~ 428 (432)
T COG4109 390 IDSVLEIYPRILEEGRKFAKIDVEIYH--DGQIVAKAIVTV 428 (432)
T ss_pred cccEEEEeeeeeccccccceeEEEEee--Ccchhhhheeee
Confidence 999999999999999999999999995 788888876544
No 50
>cd03447 FAS_MaoC FAS_MaoC, the MaoC-like hot dog fold of the fatty acid synthase, beta subunit. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and 17-beta-hydroxysteriod dehydrogenase (HSD).
Probab=91.45 E-value=1.9 Score=37.27 Aligned_cols=53 Identities=11% Similarity=0.032 Sum_probs=40.5
Q ss_pred EEEeEEeEeccCCCCCEEEEEEEEeeeCCcEEEEEEEEEecCCCcEEEEEEEE
Q 015458 162 VSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATST 214 (406)
Q Consensus 162 V~r~~Ie~~r~p~~gD~I~I~Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~ 214 (406)
+.+++++|.+|...||+|+++.|+.+........++.+++..+|+++.+++..
T Consensus 70 ~~~~~~rf~~PV~~gdtl~~~~~v~~~~~~~~~~~~~~~nq~~g~~V~~g~~~ 122 (126)
T cd03447 70 VRSFTASFVGMVLPNDELEVRLEHVGMVDGRKVIKVEARNEETGELVLRGEAE 122 (126)
T ss_pred EEEEEEEEcccCcCCCEEEEEEEEEEEeCCeEEEEEEEEECCCCCEEEEEEEE
Confidence 34579999999999999999999977544445556778873338888887754
No 51
>cd03441 R_hydratase_like (R)-hydratase [(R)-specific enoyl-CoA hydratase]. Catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. The structure of the monomer includes a five-strand antiparallel beta-sheet wrapped around a central alpha helix, referred to as a hot dog fold. The active site lies within a substrate-binding tunnel formed by the homodimer. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit.
Probab=90.74 E-value=2.5 Score=35.23 Aligned_cols=56 Identities=11% Similarity=-0.026 Sum_probs=43.2
Q ss_pred eEEEEEEeEEeEeccCCCCCEEEEEEEEeeeCC----cEEEEEEEEEecCCCcEEEEEEEE
Q 015458 158 LIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGK----NGMRRDWLIRSQATGHIFARATST 214 (406)
Q Consensus 158 l~WVV~r~~Ie~~r~p~~gD~I~I~Twv~~~g~----~~~~Rdf~I~d~~~Gevia~AtS~ 214 (406)
..+++...+++|.+|.+.||+|+++.++..... ..........+ ++|+++..+++.
T Consensus 66 ~~~~~~~~~~~f~~Pv~~Gd~l~~~~~v~~~~~~~~~~~v~~~~~~~n-~~g~~v~~g~~~ 125 (127)
T cd03441 66 DGANLGSQSVRFLAPVFPGDTLRVEVEVLGKRPSKGRGVVTVRTEARN-QGGEVVLSGEAT 125 (127)
T ss_pred ccceeEEeEEEEeCCcCCCCEEEEEEEEEEeeccCCCcEEEEEEEEEe-CCCCEEEEEEEE
Confidence 466788999999999999999999999976642 23455566676 588888776643
No 52
>TIGR01750 fabZ beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ. This enzyme, FabZ, shows overlapping substrate specificity with FabA with regard to chain length in fatty acid biosynthesis. FabZ works preferentially on shorter chains and is often designated (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase, although its actual specificity is broader. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains.
Probab=90.39 E-value=11 Score=32.57 Aligned_cols=86 Identities=10% Similarity=0.046 Sum_probs=55.3
Q ss_pred cCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEE-eEEeEeccCCCCCEEEEEEEEeeeCCcEEEEEEE
Q 015458 120 ATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSR-MQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWL 198 (406)
Q Consensus 120 v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r-~~Ie~~r~p~~gD~I~I~Twv~~~g~~~~~Rdf~ 198 (406)
+--.-++.++-+++..++. . ..+ .....+....+.. .+++|.++.+-||+|++..++..........+..
T Consensus 53 ~Pg~l~iE~~aQ~~~~~~~---~---~~~---~~~~~~~~~~l~~~~~~kF~~~v~pGd~l~i~~~i~~~~~~~~~~~~~ 123 (140)
T TIGR01750 53 MPGVLIVEALAQAGGVLAI---L---SLG---GEIGKGKLVYFAGIDKAKFRRPVVPGDQLILHAEFLKKRRKIGKFKGE 123 (140)
T ss_pred ChHHHHHHHHHHHHHHHhe---c---ccc---ccCCCCcEEEEeecceeEECCccCCCCEEEEEEEEEEccCCEEEEEEE
Confidence 4444567777776655431 1 000 0011222334444 6999999999999999999987665555555566
Q ss_pred EEecCCCcEEEEEEEEEE
Q 015458 199 IRSQATGHIFARATSTWV 216 (406)
Q Consensus 199 I~d~~~Gevia~AtS~wV 216 (406)
+. .+|+++++|+...+
T Consensus 124 ~~--~~g~~va~~~~~~~ 139 (140)
T TIGR01750 124 AT--VDGKVVAEAEITFA 139 (140)
T ss_pred EE--ECCEEEEEEEEEEE
Confidence 65 48999999988764
No 53
>PRK13692 (3R)-hydroxyacyl-ACP dehydratase subunit HadA; Provisional
Probab=90.09 E-value=3.9 Score=36.97 Aligned_cols=60 Identities=8% Similarity=0.119 Sum_probs=46.3
Q ss_pred EEeEEeEeccCCCCCEEEEEEEEeeeC----CcEEEEEEEEEecCCCcEEEEEEEEEEEEecCCC
Q 015458 163 SRMQVEIDHYPIWGEVVEIDTWVGASG----KNGMRRDWLIRSQATGHIFARATSTWVMMNQQTR 223 (406)
Q Consensus 163 ~r~~Ie~~r~p~~gD~I~I~Twv~~~g----~~~~~Rdf~I~d~~~Gevia~AtS~wVl~D~~tR 223 (406)
...+++|.+|.+.||+|.++..+.... +-.+..+..+++ ++|+++++++++.+.-..+.+
T Consensus 87 ~~q~~~f~~PV~~GDtL~~~~eV~~~~~~~~~giv~~~~~v~N-q~Ge~V~~~~~~~~~r~~~~~ 150 (159)
T PRK13692 87 VDQVLKFEKPIVAGDKLYCDVYVDSVREAHGTQIIVTKNIVTN-EEGDVVQETYTTLAGRAGEDG 150 (159)
T ss_pred eeeEEEEeCCccCCCEEEEEEEEEEEEEcCCceEEEEEEEEEc-CCCCEEEEEEEEEEEecCCcC
Confidence 347899999999999999999986432 123456677776 799999999999888665543
No 54
>cd03454 YdeM YdeM is a Bacillus subtilis protein that belongs to a family of prokaryotic proteins of unkown function. YdeM has sequence similarity to the hot-dog fold of (R)-specific enoyl-CoA hydratase. Other enzymes with this fold include the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=90.00 E-value=1.7 Score=37.62 Aligned_cols=51 Identities=8% Similarity=-0.026 Sum_probs=39.9
Q ss_pred eEEeEeccCCCCCEEEEEEEEeeeC-------CcEEEEEEEEEecCCCcEEEEEEEEEE
Q 015458 165 MQVEIDHYPIWGEVVEIDTWVGASG-------KNGMRRDWLIRSQATGHIFARATSTWV 216 (406)
Q Consensus 165 ~~Ie~~r~p~~gD~I~I~Twv~~~g-------~~~~~Rdf~I~d~~~Gevia~AtS~wV 216 (406)
.+++|.+|...||+|.++.++.+.. +-.......+.| ++|+++++++.+.+
T Consensus 81 ~~~~f~~pv~~Gd~l~~~~~v~~~~~~~~~~~~~~v~~~~~~~n-q~g~~v~~~~~~~~ 138 (140)
T cd03454 81 DELRWPRPVRPGDTLSVEVEVLDKRPSRSRPDRGIVTLRSETLN-QRGEVVLTFEATVL 138 (140)
T ss_pred eeeEeCCCCCCCCEEEEEEEEEEEeecCCCCCCeEEEEEEEEEc-CCCCEEEEEEehhe
Confidence 4899999999999999999997552 113455677776 79999999887654
No 55
>cd03446 MaoC_like MoaC_like Similar to the MaoC (monoamine oxidase C) dehydratase regulatory protein but without the N-terminal PutA domain. This protein family has a hot-dog fold similar to that of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=89.58 E-value=2.1 Score=36.79 Aligned_cols=51 Identities=8% Similarity=0.098 Sum_probs=39.3
Q ss_pred eEEeEeccCCCCCEEEEEEEEeeeCC-----c-EEEEEEEEEecCCCcEEEEEEEEEE
Q 015458 165 MQVEIDHYPIWGEVVEIDTWVGASGK-----N-GMRRDWLIRSQATGHIFARATSTWV 216 (406)
Q Consensus 165 ~~Ie~~r~p~~gD~I~I~Twv~~~g~-----~-~~~Rdf~I~d~~~Gevia~AtS~wV 216 (406)
.+++|.+|.+.||+|.++.++.+... . .+.....+++ ++|++++++.++.+
T Consensus 83 ~~~~f~~pv~~GD~l~~~~~v~~~~~~~~~~~~~v~~~~~~~n-q~g~~v~~~~~~~l 139 (140)
T cd03446 83 DNLRFLNPVFIGDTIRAEAEVVEKEEKDGEDAGVVTRRIEVVN-QRGEVVQSGEMSLL 139 (140)
T ss_pred ceEEEcCCCCCCCEEEEEEEEEEecccCCCCceEEEEEEEEEc-CCCCEEEEEEEeee
Confidence 48999999999999999999976531 1 2344566676 79999999887754
No 56
>cd03453 SAV4209_like SAV4209_like. Similar in sequence to the Streptomyces avermitilis SAV4209 protein, with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=89.19 E-value=3 Score=35.61 Aligned_cols=52 Identities=10% Similarity=0.003 Sum_probs=39.9
Q ss_pred EEEeEEeEeccCCCCCEEEEEEEEeee----CCcEEEEEEEEEecCCCcEEEEEEEE
Q 015458 162 VSRMQVEIDHYPIWGEVVEIDTWVGAS----GKNGMRRDWLIRSQATGHIFARATST 214 (406)
Q Consensus 162 V~r~~Ie~~r~p~~gD~I~I~Twv~~~----g~~~~~Rdf~I~d~~~Gevia~AtS~ 214 (406)
+.++.++|.+|.+.||+|.++.++.+. ++.....+..+.+ ++|+++..++.+
T Consensus 70 i~~~~~rf~~Pv~~Gdtl~~~~~v~~~~~~~~~~~v~~~~~~~n-q~g~~v~~g~a~ 125 (127)
T cd03453 70 VVSFGVRFTKPVPVPDTLTCTGIVVEKTVADGEDALTVTVDATD-QAGGKKVLGRAI 125 (127)
T ss_pred eEEEEEEECCcCcCCCEEEEEEEEEEEEecCCCcEEEEEEEEEE-cCCCEEEEEEEE
Confidence 357789999999999999999998653 2223455677786 789988887754
No 57
>PRK04424 fatty acid biosynthesis transcriptional regulator; Provisional
Probab=88.36 E-value=5.3 Score=36.97 Aligned_cols=59 Identities=10% Similarity=-0.065 Sum_probs=45.5
Q ss_pred CeEEEEEEeEEeEeccCCCCCEEEEEEEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEEE
Q 015458 157 NLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVM 217 (406)
Q Consensus 157 gl~WVV~r~~Ie~~r~p~~gD~I~I~Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wVl 217 (406)
+..-+..-.+++|.+|...||+|.++.++...++....-+..+. .+|+++++|....+.
T Consensus 123 ~~~~~~~i~~irF~kPV~pGD~L~~ea~v~~~~~~~~~v~~~~~--v~g~~V~ege~~~~~ 181 (185)
T PRK04424 123 AELALTGVANIRFKRPVKLGERVVAKAEVVRKKGNKYIVEVKSY--VGDELVFRGKFIMYR 181 (185)
T ss_pred CcEEEEEeeeEEEccCCCCCCEEEEEEEEEEccCCEEEEEEEEE--ECCEEEEEEEEEEEE
Confidence 44445556799999999999999999999877665444444454 589999999887765
No 58
>cd03451 FkbR2 FkbR2 is a Streptomyces hygroscopicus protein with a hot dog fold that belongs to a conserved family of proteins found in prokaryotes and archaea but not in eukaryotes. FkbR2 has sequence similarity to (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The function of FkbR2 is unknown.
Probab=88.05 E-value=2.8 Score=36.29 Aligned_cols=52 Identities=10% Similarity=-0.025 Sum_probs=39.6
Q ss_pred eEEeEeccCCCCCEEEEEEEEeeeCC-------cEEEEEEEEEecCCCcEEEEEEEEEEE
Q 015458 165 MQVEIDHYPIWGEVVEIDTWVGASGK-------NGMRRDWLIRSQATGHIFARATSTWVM 217 (406)
Q Consensus 165 ~~Ie~~r~p~~gD~I~I~Twv~~~g~-------~~~~Rdf~I~d~~~Gevia~AtS~wVl 217 (406)
.+++|.+|.+.||+|+++.++.+... ..+.....+.+ ++|+++++++.+.++
T Consensus 84 ~~~~f~~pv~~GDtl~~~~~v~~~~~~~~~~~~~~v~~~~~~~n-q~g~~V~~~~~~~~~ 142 (146)
T cd03451 84 DEVRFPAPVFHGDTLYAESEVLSKRESKSRPDAGIVTVRTVGYN-QDGEPVLSFERTALV 142 (146)
T ss_pred cEEEecCCCCCCCEEEEEEEEEEEecCCCCCCCeEEEEEEEEEC-CCCCEEEEEEehhEE
Confidence 48999999999999999999976531 13344455664 799999999886654
No 59
>PRK00006 fabZ (3R)-hydroxymyristoyl-ACP dehydratase; Reviewed
Probab=87.65 E-value=18 Score=31.51 Aligned_cols=59 Identities=7% Similarity=0.068 Sum_probs=45.3
Q ss_pred EEEEEE-eEEeEeccCCCCCEEEEEEEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEEEEe
Q 015458 159 IWVVSR-MQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMN 219 (406)
Q Consensus 159 ~WVV~r-~~Ie~~r~p~~gD~I~I~Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wVl~D 219 (406)
.+++.. -+++|.+|...||+|+++.++...++.....+..+. .+|+++++++...++-|
T Consensus 87 ~~~l~gi~~~kF~~pv~pGd~l~i~~~i~~~~~~~v~~~~~~~--~~g~~v~~~~~~~~~~~ 146 (147)
T PRK00006 87 LVYFAGIDKARFKRPVVPGDQLILEVELLKQRRGIWKFKGVAT--VDGKLVAEAELMFAIRD 146 (147)
T ss_pred EEEEeeeeEEEEccccCCCCEEEEEEEEEEeeCCEEEEEEEEE--ECCEEEEEEEEEEEEEc
Confidence 334444 479999999999999999999876655555556665 48999999999887644
No 60
>cd03445 Thioesterase_II_repeat2 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=84.52 E-value=7.5 Score=31.83 Aligned_cols=52 Identities=12% Similarity=0.010 Sum_probs=45.8
Q ss_pred EEEeEEeEeccCCCCCEEEEEEEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEE
Q 015458 162 VSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTW 215 (406)
Q Consensus 162 V~r~~Ie~~r~p~~gD~I~I~Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~w 215 (406)
+..+++.|.+++..+..|++++..-..|+....|.-... ++|+++..++..+
T Consensus 41 ~~s~~~~Fl~p~~~~~pv~~~v~~lr~GRs~~~~~V~~~--Q~g~~~~~a~~sf 92 (94)
T cd03445 41 PHSLHSYFLRPGDPDQPIEYEVERLRDGRSFATRRVRAV--QNGKVIFTATASF 92 (94)
T ss_pred eEEEEEEecCCCCCCCCEEEEEEEEECCCcEEEEEEEEE--ECCEEEEEEEEEE
Confidence 678999999999999999999999999999998877776 5799998887765
No 61
>PF13452 MaoC_dehydrat_N: N-terminal half of MaoC dehydratase; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1S9C_K 3OML_A 3KHP_A.
Probab=84.42 E-value=3.7 Score=35.03 Aligned_cols=52 Identities=13% Similarity=0.044 Sum_probs=36.1
Q ss_pred eEEEEEEeEEeEeccCCCCCEEEEEEEEeeeC------Cc-EEEEEEEEEecCCCcEEEE
Q 015458 158 LIWVVSRMQVEIDHYPIWGEVVEIDTWVGASG------KN-GMRRDWLIRSQATGHIFAR 210 (406)
Q Consensus 158 l~WVV~r~~Ie~~r~p~~gD~I~I~Twv~~~g------~~-~~~Rdf~I~d~~~Gevia~ 210 (406)
..-+-....++|++|++-||+|++++.+.... +. .+..+..++| ++|+++++
T Consensus 73 ~~~vh~~~~~~~h~Pl~~Gd~l~~~~~v~~v~~k~g~G~~~~v~~~~~~~~-~~Ge~v~t 131 (132)
T PF13452_consen 73 TRLVHGEQDIEFHRPLRPGDTLTATSRVTDVYDKRGAGKGVFVTVETEYTD-QDGELVAT 131 (132)
T ss_dssp GGEEEEEEEEEESS--BSSEEEEEEEEEEEEEEES-TTSEEEEEEEEEEE--CTTEEEEE
T ss_pred hhEEecCcEEEEeCCCCCCCEEEEEEEEEEEEEecCCCCEEEEEEEEEEEC-CCCCEEEe
Confidence 34555679999999999999999999986542 12 1345567776 78998875
No 62
>PRK08190 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated
Probab=84.26 E-value=7.6 Score=41.14 Aligned_cols=66 Identities=12% Similarity=0.081 Sum_probs=48.2
Q ss_pred EEEEEEeEEeEeccCCCCCEEEEEEEEeee--CCcEEEEEEEEEecCCCcEEEEEEEEEEEEecCCCce
Q 015458 159 IWVVSRMQVEIDHYPIWGEVVEIDTWVGAS--GKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRL 225 (406)
Q Consensus 159 ~WVV~r~~Ie~~r~p~~gD~I~I~Twv~~~--g~~~~~Rdf~I~d~~~Gevia~AtS~wVl~D~~tRRp 225 (406)
+.+....+++|.+|.+.||+|+++.++... ++........+++ ++|++++.++.++++-...=.+|
T Consensus 82 ~~~~~~~~~rF~~PV~~GDtl~~~~~V~~~~~~~~~v~~~~~~~n-q~G~~V~~g~~~~l~~~~~~~~~ 149 (466)
T PRK08190 82 GTIYLGQSLRFRRPVRIGDTLTVTVTVREKDPEKRIVVLDCRCTN-QDGEVVITGTAEVIAPTEKVRRP 149 (466)
T ss_pred ceEEEEEEEEEeCCcCCCCEEEEEEEEEEEECCCCEEEEEEEEEe-CCCCEEEEEEEEeeccccccccc
Confidence 344567899999999999999999999654 3333445566676 79999999988776644433333
No 63
>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B.
Probab=84.21 E-value=7.6 Score=36.88 Aligned_cols=58 Identities=19% Similarity=0.098 Sum_probs=47.4
Q ss_pred EEEEEeEEeEeccCCCCCEEEEEEEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEEEEec
Q 015458 160 WVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQ 220 (406)
Q Consensus 160 WVV~r~~Ie~~r~p~~gD~I~I~Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wVl~D~ 220 (406)
..+..+++.|.++...| .+++++...+.||....+.-++. ++|+++++|+..+.--+.
T Consensus 34 ~~~~s~~~~fl~p~~~~-~~~~~v~~~r~Gr~~~~~~v~~~--q~~~~~~~a~~~f~~~~~ 91 (255)
T PF13622_consen 34 FDPHSLHVYFLRPVPPG-PVEYRVEVLRDGRSFSTRQVELS--QDGKVVATATASFGRPEP 91 (255)
T ss_dssp SEEEEEEEEESS--BSC-EEEEEEEEEEESSSEEEEEEEEE--ETTEEEEEEEEEEE--TT
T ss_pred CceEEEEeEeccccccC-CEEEEEEEeeCCCcEEEEEEEEE--ECCcCEEEEEEEEccCcC
Confidence 66889999999999999 99999999999999998888887 588999988887665553
No 64
>TIGR02286 PaaD phenylacetic acid degradation protein PaaD. Sequences scoring between trusted and noise include those from archaea and other species not known to catabolize phenylacetic acid and which are not adjacent to other genes potentially involved with such a pathway.
Probab=84.07 E-value=11 Score=31.36 Aligned_cols=65 Identities=5% Similarity=-0.036 Sum_probs=47.5
Q ss_pred cceeeccccCccCCccchHHHHHHHHHhCCcchh--cc-CceEEEEEEEecccCCCCeEEEEEEEcCC
Q 015458 266 SDLKPKRSDLDMNHHVNNVKYVRWMLETIPDRIL--ES-NQLSGITLEYRRECGGSDVVQSLCQPDED 330 (406)
Q Consensus 266 ~~~~vR~sDiD~ngHVNN~~Y~~w~~e~lp~e~~--~~-~~l~~i~i~Y~~E~~~gd~v~~~t~v~~~ 330 (406)
-.+.++...++.+|-+.=-.++.++..+...... .. ..-.+++++|++|+..||.|....++...
T Consensus 18 ~~l~~~~~~~n~~g~~HGG~i~al~D~~~~~~~~~~~~~~~t~~~~i~f~rp~~~G~~l~~~a~v~~~ 85 (114)
T TIGR02286 18 VAMTVRADMLNGHGTAHGGFLFSLADSAFAYACNSYGDAAVAAQCTIDFLRPGRAGERLEAEAVEVSR 85 (114)
T ss_pred EEEECCHHHcCcCCCchHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEEecCCCCCCEEEEEEEEEEe
Confidence 3567777888888888888888888776422111 11 12368899999999999999999888754
No 65
>cd03452 MaoC_C MaoC_C The C-terminal hot dog fold of the MaoC (monoamine oxidase C) dehydratase regulatory protein. Orthologs of MaoC include PaaZ [Escherichia coli] and PaaN [Pseudomonas putida], which are putative ring-opening enzymes involved in phenylacetic acid degradation. The C-terminal domain of MaoC has sequence similarity to (R)-specific enoyl-CoA hydratase,Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. MaoC also has an N-terminal PutA domain like that found in the E. coli PutA proline dehydrogenase and other members of the aldehyde dehydrogenase family.
Probab=82.86 E-value=6.7 Score=34.33 Aligned_cols=52 Identities=10% Similarity=0.035 Sum_probs=39.8
Q ss_pred eEEeEeccCCCCCEEEEEEEEeeeC--C----cEEEEEEEEEecCCCcEEEEEEEEEEE
Q 015458 165 MQVEIDHYPIWGEVVEIDTWVGASG--K----NGMRRDWLIRSQATGHIFARATSTWVM 217 (406)
Q Consensus 165 ~~Ie~~r~p~~gD~I~I~Twv~~~g--~----~~~~Rdf~I~d~~~Gevia~AtS~wVl 217 (406)
.+++|.+|.+.||+|+++..+.... + ..+.....+.+ ++|+++++++....+
T Consensus 81 ~~~rf~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~n-q~g~~V~~~~~~~~~ 138 (142)
T cd03452 81 ENLRFLEPVYPGDTIQVRLTCKRKIPRDGQDYGVVRWDAEVTN-QNGELVASYDILTLV 138 (142)
T ss_pred ceEEECCCCCCCCEEEEEEEEEEEeecCCCCcEEEEEEEEEEe-cCCCEEEEEEehHee
Confidence 4999999999999999999986652 1 13455667776 789999998865543
No 66
>PLN02864 enoyl-CoA hydratase
Probab=82.41 E-value=7.1 Score=39.20 Aligned_cols=58 Identities=14% Similarity=0.107 Sum_probs=46.5
Q ss_pred EEEeEEeEeccCCCCCEEEEEEEEeeeCCcE----EEEEEEEEecCCCcEEEEEEEEEEEEe
Q 015458 162 VSRMQVEIDHYPIWGEVVEIDTWVGASGKNG----MRRDWLIRSQATGHIFARATSTWVMMN 219 (406)
Q Consensus 162 V~r~~Ie~~r~p~~gD~I~I~Twv~~~g~~~----~~Rdf~I~d~~~Gevia~AtS~wVl~D 219 (406)
=....|+++||...++.+++++++..+...+ +..+..+.+..+|+++++..++.++-.
T Consensus 96 Hgeq~i~~~rPlp~~~~l~~~~~v~~v~dkG~ga~v~~~~~~~d~~~Ge~v~t~~st~~~Rg 157 (310)
T PLN02864 96 HGQQYIEIYKPIPSSASVRNKVSIAGLHDKGKAAILELETLSYEKDSGELLCMNRSTIFLRG 157 (310)
T ss_pred eccceEEEECCCCCCCEEEEEEEEEEEEeCCCcEEEEEEEEEEeCCCCcEEEEEEEEEEEeC
Confidence 4578999999999999999999998763222 456677777579999999998888765
No 67
>PRK10694 acyl-CoA esterase; Provisional
Probab=82.03 E-value=3.6 Score=36.10 Aligned_cols=69 Identities=13% Similarity=-0.024 Sum_probs=52.8
Q ss_pred ceeeccccCccCCccchHHHHHHHHHhCCcc---hhc-cCceEEE-EEEEecccCCCCeEEEEEEEcCCCeeee
Q 015458 267 DLKPKRSDLDMNHHVNNVKYVRWMLETIPDR---ILE-SNQLSGI-TLEYRRECGGSDVVQSLCQPDEDGILKD 335 (406)
Q Consensus 267 ~~~vR~sDiD~ngHVNN~~Y~~w~~e~lp~e---~~~-~~~l~~i-~i~Y~~E~~~gd~v~~~t~v~~~~~~s~ 335 (406)
...+...|...+|-+.--..+.|+.++.... +.. .....++ .++|++|++.||.|.+.+++...|..|-
T Consensus 15 ~~~v~p~~~N~~g~lfGG~ll~~~D~~a~i~a~~~~~~~~vtv~vd~i~F~~Pv~~Gd~l~~~a~V~~~g~sS~ 88 (133)
T PRK10694 15 RTLAMPADTNANGDIFGGWLMSQMDIGGAILAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCVKTGTTSI 88 (133)
T ss_pred EEEcChhhcCCCCcEeHHHHHHHHHHHHHHHHHHHcCCceEEEEECceEECCCcccCcEEEEEEEEEEccCceE
Confidence 3567889999999999999999999874221 111 2234667 6699999999999999999987765544
No 68
>TIGR02447 yiiD_Cterm thioesterase domain, putative. This family consists of a broadly distributed uncharacterized domain found often as a standalone protein. The member from Shewanella oneidensis, PDB|1T82_A (Forouhar, et al., unpublished) is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an Acetyltransf_1 domain (PFAM model pfam00583). The function of this protein is unknown.
Probab=81.05 E-value=37 Score=29.66 Aligned_cols=100 Identities=14% Similarity=0.148 Sum_probs=65.5
Q ss_pred EEEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEEEE
Q 015458 104 RQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDT 183 (406)
Q Consensus 104 ~~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I~T 183 (406)
+.+..++. ...+.|.++=..++.++..++..-+... . ... ..+..-|....+|+|.+|.+- + +.+..
T Consensus 25 ~v~~pl~~-n~N~~G~~hGG~l~tlad~a~~~~~~~~-~--------~~~-~~~~~~vt~~~~i~yl~P~~~-~-~~a~~ 91 (138)
T TIGR02447 25 RLSAPLAA-NINHHGTMFGGSLYTLATLSGWGLLWLR-L--------QEL-GIDGDIVIADSHIRYLAPVTG-D-PVANC 91 (138)
T ss_pred EEEeECCC-CcCCCCceehhHHHHHHHHHHHHHHHHH-H--------HHh-CCCCcEEEEEeeeEEcCCcCC-C-eEEEE
Confidence 34555666 4889999999999999965433211100 0 011 112345777899999999864 4 55554
Q ss_pred EE-------------eeeCCcEEEEEEEEEecCCCcEEEEEEEEEEEE
Q 015458 184 WV-------------GASGKNGMRRDWLIRSQATGHIFARATSTWVMM 218 (406)
Q Consensus 184 wv-------------~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wVl~ 218 (406)
.+ ...|+..+..+-+|++ +|+++|+++.+++.+
T Consensus 92 ~~~~~~~~~~~~~~l~~~gr~~~~~~~~v~~--~~~lvA~~~g~~~~~ 137 (138)
T TIGR02447 92 EAPDLESWEAFLATLQRGGKARVKLEAQISS--DGKLAATFSGEYVAL 137 (138)
T ss_pred EcCCHHHHHHHHHHHHhCCceEEEEEEEEEE--CCEEEEEEEEEEEEe
Confidence 44 3446666666777884 789999999999875
No 69
>cd00493 FabA_FabZ FabA/Z, beta-hydroxyacyl-acyl carrier protein (ACP)-dehydratases: One of several distinct enzyme types of the dissociative, type II, fatty acid synthase system (found in bacteria and plants) required to complete successive cycles of fatty acid elongation. The third step of the elongation cycle, the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, is catalyzed by FabA or FabZ. FabA is bifunctional and catalyzes an additional isomerization reaction of trans-2-acyl-ACP to cis-3-acyl-ACP, an essential reaction to unsaturated fatty acid synthesis. FabZ is the primary dehydratase that participates in the elongation cycles of saturated as well as unsaturated fatty acid biosynthesis, whereas FabA is more active in the dehydration of beta-hydroxydecanoyl-ACP. The FabA structure is homodimeric with two independent active sites located at the dimer interface.
Probab=78.99 E-value=37 Score=28.34 Aligned_cols=85 Identities=14% Similarity=0.097 Sum_probs=58.9
Q ss_pred CCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEEEEEEeeeCCcEEEEEE
Q 015458 118 KTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDW 197 (406)
Q Consensus 118 G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I~Twv~~~g~~~~~Rdf 197 (406)
+.+.-.-++.++-+++..++.. . +... . .....+..+.-.++++.++..-||+++++.++...+......+.
T Consensus 42 p~lPg~~~iE~~aQ~~~~~~~~---~--~~~~--~-~~~~~~~l~~~~~~kf~~~v~pgd~l~i~~~i~~~~~~~~~~~~ 113 (131)
T cd00493 42 PVMPGVLGIEAMAQAAAALAGL---L--GLGK--G-NPPRLGYLAGVRKVKFRGPVLPGDTLTLEVELLKVRRGLGKFDG 113 (131)
T ss_pred CCCCcHHHHHHHHHHHHHHHHh---c--cccc--c-cCCcEEEEEEcceeEECCCcCCCCEEEEEEEEEEeeCCEEEEEE
Confidence 5566778888888888777531 1 1100 0 12233444445699999999999999999999877654555566
Q ss_pred EEEecCCCcEEEEEE
Q 015458 198 LIRSQATGHIFARAT 212 (406)
Q Consensus 198 ~I~d~~~Gevia~At 212 (406)
.++. +|+++++++
T Consensus 114 ~~~~--~g~~v~~~~ 126 (131)
T cd00493 114 RAYV--DGKLVAEAE 126 (131)
T ss_pred EEEE--CCEEEEEEE
Confidence 7774 699999998
No 70
>KOG4366 consensus Predicted thioesterase [General function prediction only]
Probab=77.04 E-value=0.82 Score=42.55 Aligned_cols=99 Identities=8% Similarity=0.001 Sum_probs=74.5
Q ss_pred cCCCCCC-CcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEEEEEEeeeCC
Q 015458 112 YEVGPDK-TATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGK 190 (406)
Q Consensus 112 ~E~D~~G-~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I~Twv~~~g~ 190 (406)
.|+|-.- |+||+.|++=+.-|+.+|+..- |+ ...+...+..-|..-.-+.|.|..+.-+...|.|.+.....
T Consensus 60 ~dlDtll~HmnNArYfrElDfAR~~~~~r~-----~l--~~~lr~~~~~~v~~As~~ryrr~Irpfh~y~v~sRiI~WDe 132 (213)
T KOG4366|consen 60 TDLDTLLSHMNNARYFRELDFARVNFYCRT-----GL--YLMLRSKRGPYVQGASVFRYRREIRPFHPYSVSSRIICWDE 132 (213)
T ss_pred chHHHHHHHhhhhHHHHHhhHHHHHHHHHH-----hH--HHHHHhcCCCeeechhhhhhhhhcCCCCccceeeEEEEEch
Confidence 5666664 9999999999999999997532 21 11234455566666677889999999999999999987655
Q ss_pred cEEE--EEEEEEecCCCcEEEEEEEEEEEEe
Q 015458 191 NGMR--RDWLIRSQATGHIFARATSTWVMMN 219 (406)
Q Consensus 191 ~~~~--Rdf~I~d~~~Gevia~AtS~wVl~D 219 (406)
..++ -.|.+. .+|=+++-+.+..++.|
T Consensus 133 kaiyle~rFv~~--sd~fvcala~~kq~l~d 161 (213)
T KOG4366|consen 133 KAIYLESRFVIL--SDGFVCALALTKQVLKD 161 (213)
T ss_pred hhhhhhhheeec--cCceEeehHHHHHHHhc
Confidence 4433 335554 68999999999999998
No 71
>PF03756 AfsA: A-factor biosynthesis hotdog domain; InterPro: IPR005509 The AfsA family are key enzymes in A-factor biosynthesis, which is essential for streptomycin production and resistance. This domain is distantly related to the thioester dehydratase FabZ family and therefore has a Hotdog domain [].
Probab=73.66 E-value=28 Score=29.84 Aligned_cols=59 Identities=12% Similarity=0.288 Sum_probs=45.0
Q ss_pred CeEEEEEEeEEeEeccCCCCCEEEEEEEEeeeCC-----cEEEEEEEEEecCCCcEEEEEEEEEEE
Q 015458 157 NLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGK-----NGMRRDWLIRSQATGHIFARATSTWVM 217 (406)
Q Consensus 157 gl~WVV~r~~Ie~~r~p~~gD~I~I~Twv~~~g~-----~~~~Rdf~I~d~~~Gevia~AtS~wVl 217 (406)
+..+++..+.++|.++..+.-.+.|+..+..... ..+.....+. ++|+++++++..+-|
T Consensus 69 ~~~~~~~~l~~~f~~~~e~~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~--q~g~~~a~~~~~~tc 132 (132)
T PF03756_consen 69 DHQFVLTSLDFTFSRFAELDVPADLTVRITCRDRRGGRPRGLRFRVTVS--QGGRVVATASMTFTC 132 (132)
T ss_pred CceEEEEEEEEEEccccccCCCEEEEEEEEeccccCCccceEEEEEEEE--ECCEEEEEEEEEEEC
Confidence 4468999999999999888888888877754322 2455566666 699999999988753
No 72
>KOG4366 consensus Predicted thioesterase [General function prediction only]
Probab=72.51 E-value=1.2 Score=41.43 Aligned_cols=56 Identities=23% Similarity=0.201 Sum_probs=34.8
Q ss_pred cccCccCC-ccchHHHHHHHHHhC--------Ccchh---c-cCceEEEEEEEecccCCCCeEEEEEEE
Q 015458 272 RSDLDMNH-HVNNVKYVRWMLETI--------PDRIL---E-SNQLSGITLEYRRECGGSDVVQSLCQP 327 (406)
Q Consensus 272 ~sDiD~ng-HVNN~~Y~~w~~e~l--------p~e~~---~-~~~l~~i~i~Y~~E~~~gd~v~~~t~v 327 (406)
.+|+|..- |+||++|++=+.=+. -...+ . ......-.+.|+|++++-+...+.+.+
T Consensus 59 s~dlDtll~HmnNArYfrElDfAR~~~~~r~~l~~~lr~~~~~~v~~As~~ryrr~Irpfh~y~v~sRi 127 (213)
T KOG4366|consen 59 STDLDTLLSHMNNARYFRELDFARVNFYCRTGLYLMLRSKRGPYVQGASVFRYRREIRPFHPYSVSSRI 127 (213)
T ss_pred cchHHHHHHHhhhhHHHHHhhHHHHHHHHHHhHHHHHHhcCCCeeechhhhhhhhhcCCCCccceeeEE
Confidence 39999998 999999994332221 00111 1 122234455699999998877666654
No 73
>PRK11688 hypothetical protein; Provisional
Probab=72.38 E-value=21 Score=31.71 Aligned_cols=65 Identities=6% Similarity=-0.065 Sum_probs=44.6
Q ss_pred cceeeccccCc--cCCccchHHHHHHHHHhCCcchhc-------------------cCceEEEEEEEecccCCCCeEEEE
Q 015458 266 SDLKPKRSDLD--MNHHVNNVKYVRWMLETIPDRILE-------------------SNQLSGITLEYRRECGGSDVVQSL 324 (406)
Q Consensus 266 ~~~~vR~sDiD--~ngHVNN~~Y~~w~~e~lp~e~~~-------------------~~~l~~i~i~Y~~E~~~gd~v~~~ 324 (406)
-.++++...+. ..|.++=-.....+..+....... ...-.+++++|++|+. |+.|...
T Consensus 41 ~~l~~~~~~~~n~~~G~vHGG~i~tl~D~a~g~a~~~~~~~~~~~~~~~~~~~~~~~~vTi~l~i~fl~p~~-g~~l~a~ 119 (154)
T PRK11688 41 LSFKMQPELVGNIAQSILHGGVIASVLDVAGGLVCVGGILARHEDISEEELRQRLSRLGTIDLRVDYLRPGR-GERFTAT 119 (154)
T ss_pred EEeeCCHHHcCCCCcCeeeHHHHHHHHHHHHHHHHHhhcccccccccccccccccccceEEEEEEEeeccCC-CCeEEEE
Confidence 35666666664 468888888888887765322211 1123689999999996 9999998
Q ss_pred EEEcCCC
Q 015458 325 CQPDEDG 331 (406)
Q Consensus 325 t~v~~~~ 331 (406)
.++...|
T Consensus 120 a~v~~~g 126 (154)
T PRK11688 120 SSVLRAG 126 (154)
T ss_pred EEEEEcc
Confidence 8887654
No 74
>TIGR00369 unchar_dom_1 uncharacterized domain 1. Most proteins containing this domain consist almost entirely of a single copy of this domain. A protein from C. elegans consists of two tandem copies of the domain. The domain is also found as the N-terminal region of an apparent initiation factor eIF-2B alpha subunit of Aquifex aeolicus. The function of the domain is unknown.
Probab=68.12 E-value=62 Score=26.85 Aligned_cols=66 Identities=8% Similarity=-0.092 Sum_probs=46.3
Q ss_pred ccceeeccccCccCCccchHHHHHHHHHhCCcc----hhcc--CceEEEEEEEecccCCCCeEEEEEEEcCCC
Q 015458 265 NSDLKPKRSDLDMNHHVNNVKYVRWMLETIPDR----ILES--NQLSGITLEYRRECGGSDVVQSLCQPDEDG 331 (406)
Q Consensus 265 ~~~~~vR~sDiD~ngHVNN~~Y~~w~~e~lp~e----~~~~--~~l~~i~i~Y~~E~~~gd~v~~~t~v~~~~ 331 (406)
...+.++....+..|.++=-..+.|++.+...- .... ..-.+++++|.+|+..| .|....++...|
T Consensus 19 ~~~~~v~~~~~n~~g~vhGG~l~~l~D~a~~~a~~~~~~~~~~~vt~~l~i~f~~p~~~g-~l~a~a~v~~~g 90 (117)
T TIGR00369 19 EATMPVDERTLQPFGSLHGGVSAALADTAGSAAGYLCNSGGQAVVGLELNANHLRPAREG-KVRAIAQVVHLG 90 (117)
T ss_pred EEEEEcCHHHcCCcccChHHHHHHHHHHHHHHHHHhhcCCCceEEEEEEEeeeccccCCC-EEEEEEEEEecC
Confidence 345677787888888888888888877664111 1111 22368999999999999 888888776543
No 75
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=66.91 E-value=21 Score=34.48 Aligned_cols=53 Identities=8% Similarity=-0.070 Sum_probs=47.1
Q ss_pred EEEeEEeEeccCCCCCEEEEEEEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEE
Q 015458 162 VSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (406)
Q Consensus 162 V~r~~Ie~~r~p~~gD~I~I~Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wV 216 (406)
+..+++.|.+++..+..|++++....-||....|.-.++ ++|+++++++..+.
T Consensus 46 ~~S~h~~Fl~~~~~~~pv~~~V~~lR~GRs~~~r~V~~~--Q~g~~~~~a~asf~ 98 (271)
T TIGR00189 46 PHSLHSYFVRAGDPKKPIIYDVERLRDGRSFITRRVKAV--QHGKTIFTLQASFQ 98 (271)
T ss_pred cceeEEEecCCCCCCCCEEEEEEEeeCCCceEEEEEEEE--ECCEEEEEEEEEcc
Confidence 558999999999999999999999999999998877777 58999999987765
No 76
>cd03453 SAV4209_like SAV4209_like. Similar in sequence to the Streptomyces avermitilis SAV4209 protein, with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=62.71 E-value=53 Score=27.82 Aligned_cols=27 Identities=7% Similarity=0.097 Sum_probs=23.5
Q ss_pred ceEEEEEEEecccCCCCeEEEEEEEcC
Q 015458 303 QLSGITLEYRRECGGSDVVQSLCQPDE 329 (406)
Q Consensus 303 ~l~~i~i~Y~~E~~~gd~v~~~t~v~~ 329 (406)
.+.++++.|++|++.||.|.+...+.+
T Consensus 69 ~i~~~~~rf~~Pv~~Gdtl~~~~~v~~ 95 (127)
T cd03453 69 RVVSFGVRFTKPVPVPDTLTCTGIVVE 95 (127)
T ss_pred ceEEEEEEECCcCcCCCEEEEEEEEEE
Confidence 457889999999999999999888764
No 77
>cd03449 R_hydratase (R)-hydratase [(R)-specific enoyl-CoA hydratase] catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. (R)-hydratase contains a hot-dog fold similar to those of thioesterase II, and beta-hydroxydecanoyl-ACP dehydratase, MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit. The active site lies within a substrate-binding tunnel formed by the (R)-hydratase homodimer. A subset of the bacterial (R)-hydratases contain a C-terminal phosphotransacetylase (PTA) domain.
Probab=60.60 E-value=53 Score=27.21 Aligned_cols=26 Identities=19% Similarity=0.128 Sum_probs=22.8
Q ss_pred eEEEEEEEecccCCCCeEEEEEEEcC
Q 015458 304 LSGITLEYRRECGGSDVVQSLCQPDE 329 (406)
Q Consensus 304 l~~i~i~Y~~E~~~gd~v~~~t~v~~ 329 (406)
..+.++.|++|++.||.|.+..++.+
T Consensus 72 ~~~~~~~f~~Pv~~gd~l~~~~~v~~ 97 (128)
T cd03449 72 YLSQSLRFLRPVFIGDTVTATVTVTE 97 (128)
T ss_pred EEEEEEEECCCccCCCEEEEEEEEEE
Confidence 45789999999999999999888764
No 78
>COG1607 Acyl-CoA hydrolase [Lipid metabolism]
Probab=57.64 E-value=28 Score=31.67 Aligned_cols=71 Identities=15% Similarity=0.095 Sum_probs=50.7
Q ss_pred ceeeccccCccCCccchHHHHHHHHHhCC---cchhccCce--EEEEEEEecccCCCCeEEEEEEEcCCCeeeeee
Q 015458 267 DLKPKRSDLDMNHHVNNVKYVRWMLETIP---DRILESNQL--SGITLEYRRECGGSDVVQSLCQPDEDGILKDGV 337 (406)
Q Consensus 267 ~~~vR~sDiD~ngHVNN~~Y~~w~~e~lp---~e~~~~~~l--~~i~i~Y~~E~~~gd~v~~~t~v~~~~~~s~~~ 337 (406)
...+-.+|.+.||-+.=-.-+.||.++.. .++.....+ .--.++|++|++.||.|.+.+++...|..|-++
T Consensus 17 ~~lv~P~dtN~~g~ifGG~lm~~mD~~a~i~A~~~a~~~vVTasvd~v~F~~Pv~vGd~v~~~a~v~~~GrTSm~V 92 (157)
T COG1607 17 RTLVMPSDTNPNGTIFGGWLLSWMDLAAAIAASRHAGGRVVTASVDSVDFKKPVRVGDIVCLYARVVYTGRTSMEV 92 (157)
T ss_pred EEEecCCccCcccccccHHHHHHHHHHHHHHHHHHhCCeEEEEEeceEEEccccccCcEEEEEEEEeecCcccEEE
Confidence 34577889998888877777777777632 122223222 234689999999999999999999888766533
No 79
>PRK13188 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed
Probab=57.14 E-value=1e+02 Score=32.94 Aligned_cols=60 Identities=7% Similarity=0.014 Sum_probs=42.8
Q ss_pred eEEEEEEeEEeEeccCCCCCEEEEEEEEee-eCCcEEEEEEEEEecCCCcEEEEEEEEEEEEe
Q 015458 158 LIWVVSRMQVEIDHYPIWGEVVEIDTWVGA-SGKNGMRRDWLIRSQATGHIFARATSTWVMMN 219 (406)
Q Consensus 158 l~WVV~r~~Ie~~r~p~~gD~I~I~Twv~~-~g~~~~~Rdf~I~d~~~Gevia~AtS~wVl~D 219 (406)
+++.+.--+++|.+|+.-||+++++..+.. ..+.....+-.++ .+|+++++|....++.+
T Consensus 401 lg~LlgI~kvKF~~PV~PGDtL~I~veI~~~~~~giv~f~g~~~--vdGelVaeael~~~v~~ 461 (464)
T PRK13188 401 STYFMKIDKVKFRQKVVPGDTLIFKVELLSPIRRGICQMQGKAY--VNGKLVCEAELMAQIVK 461 (464)
T ss_pred eEEEEeccEEEEcCCCCCCCEEEEEEEEEEEecCCEEEEEEEEE--ECCEEEEEEEEEEEEec
Confidence 344443349999999999999999998865 3222333344555 58999999998887653
No 80
>cd03444 Thioesterase_II_repeat1 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=55.06 E-value=84 Score=25.99 Aligned_cols=56 Identities=7% Similarity=-0.085 Sum_probs=42.4
Q ss_pred EEEEEeEEeEeccCCCCCEEEEEEEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEE
Q 015458 160 WVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (406)
Q Consensus 160 WVV~r~~Ie~~r~p~~gD~I~I~Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wV 216 (406)
-.-..+.|.|++++...|-+..+.+....+.-+..-+=.|++ ++|+++|.....-+
T Consensus 48 ~aSldhsi~Fh~~~~~~~W~l~~~~~~~~~~gr~~~~~~l~~-~~G~LvAs~~Q~~l 103 (104)
T cd03444 48 SASLDHAIWFHRPFRADDWLLYEQRSPRAGNGRGLVEGRIFT-RDGELVASVAQEGL 103 (104)
T ss_pred eEeeeEEEEEeCCCCCCceEEEEEECccccCCeeEEEEEEEC-CCCCEEEEEEEeee
Confidence 345678899999999889999998887665554444457886 79999998876543
No 81
>cd03448 HDE_HSD HDE_HSD The R-hydratase-like hot dog fold of the 17-beta-hydroxysteriod dehydrogenase (HSD), and Hydratase-Dehydrogenase-Epimerase (HDE) proteins. Other enzymes with this fold include MaoC dehydratase, and the fatty acid synthase beta subunit.
Probab=54.35 E-value=69 Score=27.41 Aligned_cols=46 Identities=11% Similarity=0.219 Sum_probs=31.4
Q ss_pred EEEEeEEeEeccCCCCCEEEEEEEEeeeCCcEEEEEEEEEecCCCcEEEEE
Q 015458 161 VVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARA 211 (406)
Q Consensus 161 VV~r~~Ie~~r~p~~gD~I~I~Twv~~~g~~~~~Rdf~I~d~~~Gevia~A 211 (406)
.+..+.++|.+|...||+|.++.|.. ++ ... +.+...++|+++..+
T Consensus 71 ~~~~~~~rF~~PV~~gDtl~~~~~~~--~~-~v~--~~~~~~~~g~~v~~g 116 (122)
T cd03448 71 RFKAIKVRFSSPVFPGETLRTEMWKE--GN-RVI--FQTKVVERDVVVLSN 116 (122)
T ss_pred eeEEEEEEEcCCccCCCEEEEEEEEe--CC-EEE--EEEEEccCCcEEEEC
Confidence 45667999999999999999999853 33 222 334333466765544
No 82
>PF07977 FabA: FabA-like domain; InterPro: IPR013114 Fatty acids biosynthesis occurs by two distinct pathways: in fungi, mammals and mycobacteria, type I or associative fatty-acid biosynthesis (type I FAS) is accomplished by multifunctional proteins in which distinct domains catalyse specific reactions; in plants and most bacteria, type II or dissociative fatty-acid biosynthesis (type II FAS) is accomplished by distinct enzymes []. Both FabZ and FabA catalyse the dehydration of beta-hydroxyacyl acyl carrier protein (ACP) to trans 2-enoyl ACP. However, FabZ and FabA display subtle differences in substrate specificities, whereby FabA is most effective on acyl ACPs of 9-11 carbon atoms in length, while FabZ is less specific. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains. This enzyme domain has a HotDog fold.; PDB: 3D6X_F 2GLV_J 2GLM_E 2GLP_E 2GLL_C 1U1Z_F 3ESI_A 3AZB_T 3AZA_M 3AZ9_U ....
Probab=54.10 E-value=1.1e+02 Score=26.20 Aligned_cols=86 Identities=15% Similarity=0.096 Sum_probs=51.5
Q ss_pred CcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCC-EEEEEEEEee---eCCcEEE
Q 015458 119 TATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGE-VVEIDTWVGA---SGKNGMR 194 (406)
Q Consensus 119 ~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD-~I~I~Twv~~---~g~~~~~ 194 (406)
.+--.-+++.+-+++...+...+. ..+.+ ......+...--+++|.++..-|| .++++..+.+ .+.....
T Consensus 49 v~PGvl~iE~~aQ~~~~~~~~~~~-~~~~~-----~~~~~~~l~~~~~~kF~~~v~Pg~~~l~~~v~i~~~~~~~~~~~~ 122 (138)
T PF07977_consen 49 VMPGVLLIEAMAQAAGFLAGYSGL-AEGTG-----EARKVPFLAGIRNVKFRGPVYPGDKTLRIEVEIKKIRRREGGMAI 122 (138)
T ss_dssp -B-HHHHHHHHHHHHHHHHHHHCC-SSSCC-----CCCEEEEEEEEEEEEE-S-B-TTE-EEEEEEEEEEEEEEETTEEE
T ss_pred CCCeEhHHHHHHHHHHhHhhhccc-cccCC-----CcceEEEeccccEEEECccEeCCCcEEEEEEEEEEeecccCCEEE
Confidence 344445666776666665432110 00110 011345666778999999999999 9999998887 5555555
Q ss_pred EEEEEEecCCCcEEEEEE
Q 015458 195 RDWLIRSQATGHIFARAT 212 (406)
Q Consensus 195 Rdf~I~d~~~Gevia~At 212 (406)
.+..++ .+|+.+++|.
T Consensus 123 ~~~~~~--vdg~~v~~~~ 138 (138)
T PF07977_consen 123 FDGTAY--VDGELVAEAE 138 (138)
T ss_dssp EEEEEE--ETTEEEEEEE
T ss_pred EEEEEE--ECCEEEEEEC
Confidence 666776 4899998874
No 83
>PF01575 MaoC_dehydratas: MaoC like domain; InterPro: IPR002539 The C terminus of the MaoC protein is found to share similarity with a wide variety of enzymes. All these enzymes contain multiple domains. This domain is found in parts of two enzymes that have been assigned dehydratase activities. A deletion mutant of the C-terminal 271 amino acids in Q02207 from SWISSPROT abolished its 2-enoyl-CoA hydratase activity, suggesting that this region may be a hydratase enzyme []. The maoC gene is part of a operon with maoA which is involved in the synthesis of monoamine oxidase [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1PN4_C 1PN2_B 1S9C_K 3OML_A 1Q6W_B 2B3M_A 3K67_B ....
Probab=51.27 E-value=34 Score=28.87 Aligned_cols=32 Identities=13% Similarity=0.039 Sum_probs=25.9
Q ss_pred eEEEEEEeEEeEeccCCCCCEEEEEEEEeeeC
Q 015458 158 LIWVVSRMQVEIDHYPIWGEVVEIDTWVGASG 189 (406)
Q Consensus 158 l~WVV~r~~Ie~~r~p~~gD~I~I~Twv~~~g 189 (406)
....+.++++.|.+|...||+|.++.++.+..
T Consensus 74 ~~~~~~~~~~rF~~PV~~gdtl~~~~~v~~~~ 105 (122)
T PF01575_consen 74 PPARLGRFNVRFRAPVFPGDTLTAEVEVTEKR 105 (122)
T ss_dssp ECEEEEEEEEEESS--BTTEEEEEEEEEEEEE
T ss_pred cceEEEEEEEEEeccccCCCEEEEEEEEEEEE
Confidence 35678889999999999999999999997643
No 84
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=51.11 E-value=60 Score=32.01 Aligned_cols=54 Identities=11% Similarity=-0.056 Sum_probs=47.8
Q ss_pred EEEEeEEeEeccCCCCCEEEEEEEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEE
Q 015458 161 VVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (406)
Q Consensus 161 VV~r~~Ie~~r~p~~gD~I~I~Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wV 216 (406)
++..+++-|.+|...+..|+.++..-.-||++..|.-..+ ++|++|..++..+-
T Consensus 56 ~~hSlh~~Fl~pg~~~~pi~y~Ve~lRdGRSfstr~V~a~--Q~g~~if~~~~sF~ 109 (286)
T PRK10526 56 LVHSFHSYFLRPGDSQKPIIYDVETLRDGNSFSARRVAAI--QNGKPIFYMTASFQ 109 (286)
T ss_pred CceEEEEEcCCCCCCCCCEEEEEEEEeCCCceEeEEEEEE--ECCEEEEEEEEEec
Confidence 5778999999999999999999999999999998877777 68999998887665
No 85
>cd01289 FabA_like Domain of unknown function, appears to be related to a diverse group of beta-hydroxydecanoyl ACP dehydratases (FabA) and beta-hydroxyacyl ACP dehydratases (FabZ). This group appears to lack the conserved active site histidine of FabA and FabZ.
Probab=50.19 E-value=1.7e+02 Score=25.39 Aligned_cols=88 Identities=10% Similarity=-0.050 Sum_probs=56.4
Q ss_pred CCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCC-CCEEEEEEEEeeeCC-cEEEE
Q 015458 118 KTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIW-GEVVEIDTWVGASGK-NGMRR 195 (406)
Q Consensus 118 G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~-gD~I~I~Twv~~~g~-~~~~R 195 (406)
+.+.-..++.++-+++..+... . .. ..-.+..++..+.=-++++.++..- ||.+.|+.......+ .....
T Consensus 45 ~~~P~~l~iE~mAQa~a~~~g~---~----~~-~~~~~~~~g~l~~i~~~~f~~~v~p~Gd~l~i~~~~~~~~~~~~~~~ 116 (138)
T cd01289 45 GRLPAWVGIEYMAQAIAAHGGL---L----AR-QQGNPPRPGFLLGSRKYEAHVDRFDLGSTLLIVVAELLQGDSGLGVF 116 (138)
T ss_pred CCcchHHHHHHHHHHHHHHHHH---H----HH-hcCCCCCcEEEEEEEEEEEEcceeCCCCeeEEEeeeeeeCCCcEEEE
Confidence 6788888999998887766410 0 00 0011223455555568999988555 999999988765543 33333
Q ss_pred EEEEEecCCCcEEEEEEEEE
Q 015458 196 DWLIRSQATGHIFARATSTW 215 (406)
Q Consensus 196 df~I~d~~~Gevia~AtS~w 215 (406)
+-.++ .+|+++++|+-..
T Consensus 117 ~~~~~--v~~~~va~a~l~~ 134 (138)
T cd01289 117 ECTIE--DQGGVLASGRLNV 134 (138)
T ss_pred EEEEE--ECCEEEEEEEEEE
Confidence 44555 4789999987653
No 86
>cd03455 SAV4209 SAV4209 is a Streptomyces avermitilis protein with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The alpha- and gamma-proteobacterial members of this CD have, in addition to a hot dog fold, an N-terminal extension.
Probab=49.91 E-value=1.3e+02 Score=25.20 Aligned_cols=28 Identities=4% Similarity=-0.006 Sum_probs=24.4
Q ss_pred CceEEEEEEEecccCCCCeEEEEEEEcC
Q 015458 302 NQLSGITLEYRRECGGSDVVQSLCQPDE 329 (406)
Q Consensus 302 ~~l~~i~i~Y~~E~~~gd~v~~~t~v~~ 329 (406)
..+.++++.|++|++.||+|.+...+.+
T Consensus 67 ~~~~~~~~rf~~pv~~Gdtl~~~~~v~~ 94 (123)
T cd03455 67 ARVKSFAFRLGAPLYAGDTLRFGGRVTA 94 (123)
T ss_pred ceEEEEEEEeeccccCCCEEEEEEEEEe
Confidence 3567889999999999999999988765
No 87
>COG2030 MaoC Acyl dehydratase [Lipid metabolism]
Probab=48.37 E-value=1e+02 Score=27.62 Aligned_cols=59 Identities=12% Similarity=0.038 Sum_probs=41.5
Q ss_pred EEEEEEeEEeEeccCCCCCEEEEEEEEeeeC--C-cEE-EEEEEEEecCCCcEEEEEEEEEEEE
Q 015458 159 IWVVSRMQVEIDHYPIWGEVVEIDTWVGASG--K-NGM-RRDWLIRSQATGHIFARATSTWVMM 218 (406)
Q Consensus 159 ~WVV~r~~Ie~~r~p~~gD~I~I~Twv~~~g--~-~~~-~Rdf~I~d~~~Gevia~AtS~wVl~ 218 (406)
+-.+.-..++|.+|...||+|..++++.+.. + .++ .-....++ +.|++.......+++.
T Consensus 93 ~~~~g~~~vRF~~PV~~Gdtl~~~~~v~~~~~~~~~G~v~~~~~~~~-~~g~~v~~~~~~~~~~ 155 (159)
T COG2030 93 GANLGGDEVRFVKPVFPGDTLRARVEVLDKRPSKSRGLVTLRLETVN-QEGELVLTLEATVLVL 155 (159)
T ss_pred eeeccccceEecCCCCCCCEEEEEEEEEEeeecCCceEEEEEEEEEc-cCCcEEEEEEEeEeEe
Confidence 3345567899999999999999999997542 1 122 22234454 7888888888877664
No 88
>cd03441 R_hydratase_like (R)-hydratase [(R)-specific enoyl-CoA hydratase]. Catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. The structure of the monomer includes a five-strand antiparallel beta-sheet wrapped around a central alpha helix, referred to as a hot dog fold. The active site lies within a substrate-binding tunnel formed by the homodimer. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit.
Probab=42.77 E-value=53 Score=27.03 Aligned_cols=29 Identities=7% Similarity=0.028 Sum_probs=25.2
Q ss_pred CceEEEEEEEecccCCCCeEEEEEEEcCC
Q 015458 302 NQLSGITLEYRRECGGSDVVQSLCQPDED 330 (406)
Q Consensus 302 ~~l~~i~i~Y~~E~~~gd~v~~~t~v~~~ 330 (406)
..+...++.|++|++.||.|....++.+.
T Consensus 68 ~~~~~~~~~f~~Pv~~Gd~l~~~~~v~~~ 96 (127)
T cd03441 68 ANLGSQSVRFLAPVFPGDTLRVEVEVLGK 96 (127)
T ss_pred ceeEEeEEEEeCCcCCCCEEEEEEEEEEe
Confidence 35678999999999999999999987654
No 89
>cd01287 FabA FabA, beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase: Bacterial protein of the type II, fatty acid synthase system that binds ACP and catalyzes both dehydration and isomerization reactions, apparently in the same active site. The FabA structure is a homodimer with two independent active sites located at the dimer interface. Each active site is tunnel-shaped and completely inaccessible to solvent. No metal ions or cofactors are required for ligand binding or catalysis.
Probab=40.38 E-value=2.6e+02 Score=24.91 Aligned_cols=59 Identities=10% Similarity=-0.102 Sum_probs=43.7
Q ss_pred eEEEEEEeEEeEeccCCCCC-EEEEEEEEeeeCC----cEEEEEEEEEecCCCcEEEEEEEEEEEE
Q 015458 158 LIWVVSRMQVEIDHYPIWGE-VVEIDTWVGASGK----NGMRRDWLIRSQATGHIFARATSTWVMM 218 (406)
Q Consensus 158 l~WVV~r~~Ie~~r~p~~gD-~I~I~Twv~~~g~----~~~~Rdf~I~d~~~Gevia~AtS~wVl~ 218 (406)
+++...--.++|+++..-|| +++++..+.+.+. ..+.-+-.++ .+|+++++|+..-|.+
T Consensus 84 ~~~l~~~~~~kfr~~v~Pgd~~l~~e~~i~~~~~~~~~~~~~~~~~~~--vdg~~v~~a~~~~~~~ 147 (150)
T cd01287 84 QGAPGGPGEWKYRGQITPHNKKVTYEVHIKEVGRDGPRPYIIADASLW--VDGLRIYEAKDIAVRL 147 (150)
T ss_pred eeEeccceEEEECccCcCCCEEEEEEEEEEEEEccCCccEEEEEEEEE--ECCEEEEEEEccEEEe
Confidence 34445556899999999999 8999999988753 4444445555 4899999998766544
No 90
>PF09500 YiiD_Cterm: Putative thioesterase (yiiD_Cterm); InterPro: IPR012660 This entry consists of a broadly distributed uncharacterised domain found often as a standalone protein. The member from is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an N-terminal acetyltransferase domain (IPR000182 from INTERPRO). The function of these proteins are unknown. ; PDB: 1T82_C.
Probab=39.86 E-value=2.1e+02 Score=25.62 Aligned_cols=91 Identities=15% Similarity=0.165 Sum_probs=50.8
Q ss_pred CCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCC--eEEEEEEeEEeEeccCCCCCEEEEEEEE-----
Q 015458 113 EVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNN--LIWVVSRMQVEIDHYPIWGEVVEIDTWV----- 185 (406)
Q Consensus 113 E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~g--l~WVV~r~~Ie~~r~p~~gD~I~I~Twv----- 185 (406)
-++..|.+.=..+...+--++.-.++. .+.+.| ---||.+.+|+|.+|.. +|..-+..++
T Consensus 39 N~N~~~T~FgGSl~slatLaGW~lv~l------------~l~e~~~~~~IVi~~~~i~Y~~Pv~-~d~~A~~~~~~~~~~ 105 (144)
T PF09500_consen 39 NINHHGTMFGGSLYSLATLAGWGLVWL------------QLKEAGLNGDIVIADSNIRYLKPVT-GDFTARCSLPEPEDW 105 (144)
T ss_dssp GB-TTSSB-HHHHHHHHHHHHHHHHHH------------HHHHHT---EEEEEEEEEEE-S----S--EEEEE-------
T ss_pred CcCCCCCcchHHHHHHHHHHHHHHHHH------------HHHHhCCCCcEEEEeCceEEcCCCC-CCcEEEEeccccchh
Confidence 344567777777777666666554431 111222 46788999999999874 5544443343
Q ss_pred -------eeeCCcEEEEEEEEEecCCCcEEEEEEEEEEEE
Q 015458 186 -------GASGKNGMRRDWLIRSQATGHIFARATSTWVMM 218 (406)
Q Consensus 186 -------~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wVl~ 218 (406)
..-||..+.-.-.|++ +|+++++-+..+|.+
T Consensus 106 ~~~~~~l~~~grari~l~~~i~~--~~~~~a~f~G~yv~l 143 (144)
T PF09500_consen 106 ERFLQTLARGGRARITLEVEIYS--GGELAAEFTGRYVAL 143 (144)
T ss_dssp S---GGGGCTS-EEEEEEEEEEE--TTEEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCcEEEEEEEEEEE--CCEEEEEEEEEEEEE
Confidence 1224555666677774 889999999988875
No 91
>COG0764 FabA 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism]
Probab=37.28 E-value=3.1e+02 Score=24.59 Aligned_cols=61 Identities=13% Similarity=0.196 Sum_probs=45.9
Q ss_pred eEEEEEEeEEeEeccCCCCCEEEEEEEEeeeCCcEE-EEEEEEEecCCCcEEEEEEEEEEEEec
Q 015458 158 LIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGM-RRDWLIRSQATGHIFARATSTWVMMNQ 220 (406)
Q Consensus 158 l~WVV~r~~Ie~~r~p~~gD~I~I~Twv~~~g~~~~-~Rdf~I~d~~~Gevia~AtS~wVl~D~ 220 (406)
+..++.=-+++|+++..-||.+.++......+...+ .-+-... -+|+++++|+...+.++.
T Consensus 85 ~~~~~gid~~kF~~~V~PGd~l~l~~~~~~~~~~~~~~~~~~a~--Vdg~~v~~a~~~~~~~~~ 146 (147)
T COG0764 85 LGYFLGIDNAKFKRPVLPGDQLELEVKLLKSRRLGIGKAKGVAT--VDGKVVAEAELLFAGVEK 146 (147)
T ss_pred EEEEEEecceeecCccCCCCEEEEEEEEEEecccceEEEEEEEE--ECCEEEEEEEEEEEEeec
Confidence 666666679999999999999999999887773333 2222222 589999999998887653
No 92
>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B.
Probab=36.99 E-value=2.7e+02 Score=26.12 Aligned_cols=54 Identities=9% Similarity=0.101 Sum_probs=37.8
Q ss_pred EEEeEEeEeccC-CCCCEEEEEEEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEE
Q 015458 162 VSRMQVEIDHYP-IWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (406)
Q Consensus 162 V~r~~Ie~~r~p-~~gD~I~I~Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wV 216 (406)
-..+.|.|++.| .-+|-+.++++....+.-.+.-+-+|+| ++|+++|.+...-+
T Consensus 200 tld~ti~f~~~p~~~~~Wl~~~~~~~~~~~Gr~~~~~~l~d-~~G~lvA~~~Q~~l 254 (255)
T PF13622_consen 200 TLDHTIHFHRLPFDGDEWLLLEARSPRAGNGRALMEGRLWD-EDGRLVASSRQEAL 254 (255)
T ss_dssp EEEEEEEECSHCCTTTS-EEEEEEEEEEETTEEEEEEEEEE-TTS-EEEEEEEEEE
T ss_pred cceeEEEEEeCCccCCceEEEEEEEeEeCCCEEEEEEEEEC-CCCCEEEEEEEEee
Confidence 567777865544 4588999999887665555555567887 89999999887654
No 93
>cd03446 MaoC_like MoaC_like Similar to the MaoC (monoamine oxidase C) dehydratase regulatory protein but without the N-terminal PutA domain. This protein family has a hot-dog fold similar to that of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=36.91 E-value=1.5e+02 Score=25.10 Aligned_cols=23 Identities=13% Similarity=0.111 Sum_probs=20.4
Q ss_pred EEEEecccCCCCeEEEEEEEcCC
Q 015458 308 TLEYRRECGGSDVVQSLCQPDED 330 (406)
Q Consensus 308 ~i~Y~~E~~~gd~v~~~t~v~~~ 330 (406)
++.|++|++.||+|.....+.+.
T Consensus 84 ~~~f~~pv~~GD~l~~~~~v~~~ 106 (140)
T cd03446 84 NLRFLNPVFIGDTIRAEAEVVEK 106 (140)
T ss_pred eEEEcCCCCCCCEEEEEEEEEEe
Confidence 89999999999999999887643
No 94
>COG4109 Predicted transcriptional regulator containing CBS domains [Transcription]
Probab=36.66 E-value=63 Score=33.41 Aligned_cols=66 Identities=11% Similarity=0.127 Sum_probs=55.3
Q ss_pred eeeccccCccCCccchHHHHHHHHHhCCcchhc----cCceEEEEEEEecccCCCCeEEEEEEEcCCCee
Q 015458 268 LKPKRSDLDMNHHVNNVKYVRWMLETIPDRILE----SNQLSGITLEYRRECGGSDVVQSLCQPDEDGIL 333 (406)
Q Consensus 268 ~~vR~sDiD~ngHVNN~~Y~~w~~e~lp~e~~~----~~~l~~i~i~Y~~E~~~gd~v~~~t~v~~~~~~ 333 (406)
+.|...-++.+|-+.|.++...+.++.-..+.. .-.+..+.+.|.+|+..++.+.+...+-+.|..
T Consensus 337 ~~V~P~M~n~~Gtis~gv~~~ll~e~~qr~l~k~~~~niiIE~i~iyflk~vqid~~l~I~prIl~~gR~ 406 (432)
T COG4109 337 VEVEPQMINSLGTISNGVFTELLTEVVQRVLRKKKKRNIIIENITIYFLKPVQIDSVLEIYPRILEEGRK 406 (432)
T ss_pred EEechhhccccccchHHHHHHHHHHHHHHHHHHhcCCceEEEeeeeeeecceecccEEEEeeeeeccccc
Confidence 559999999999999999999999986433322 234689999999999999999999999887654
No 95
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=33.93 E-value=1.2e+02 Score=33.81 Aligned_cols=51 Identities=8% Similarity=-0.072 Sum_probs=38.0
Q ss_pred eEEeEeccCCCCCEEEEEEEEeeeC-----Cc-EEEEEEEEEecCCCcEEEEEEEEEE
Q 015458 165 MQVEIDHYPIWGEVVEIDTWVGASG-----KN-GMRRDWLIRSQATGHIFARATSTWV 216 (406)
Q Consensus 165 ~~Ie~~r~p~~gD~I~I~Twv~~~g-----~~-~~~Rdf~I~d~~~Gevia~AtS~wV 216 (406)
.+++|.+|.+.||+|+++..+.... .. .+..+..+++ ++|+++.++.....
T Consensus 604 ~~~rF~~PV~~GDtl~~~~~V~e~~~~~~~~~g~v~~~~~v~n-q~G~~Vl~~~~~~l 660 (663)
T TIGR02278 604 ENLRFLEPVGPGDTIQVRLTVKRKTPRDEKTYGVVEWAAEVVN-QNGEPVATYDVLTL 660 (663)
T ss_pred ceEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEEc-CCCCEEEEEEEHHh
Confidence 4899999999999999999986542 11 2445566775 78998888776543
No 96
>PRK13692 (3R)-hydroxyacyl-ACP dehydratase subunit HadA; Provisional
Probab=33.25 E-value=1.8e+02 Score=26.16 Aligned_cols=24 Identities=13% Similarity=0.116 Sum_probs=20.7
Q ss_pred EEEEEEecccCCCCeEEEEEEEcC
Q 015458 306 GITLEYRRECGGSDVVQSLCQPDE 329 (406)
Q Consensus 306 ~i~i~Y~~E~~~gd~v~~~t~v~~ 329 (406)
..++.|.+|++.||+|.....+.+
T Consensus 88 ~q~~~f~~PV~~GDtL~~~~eV~~ 111 (159)
T PRK13692 88 DQVLKFEKPIVAGDKLYCDVYVDS 111 (159)
T ss_pred eeEEEEeCCccCCCEEEEEEEEEE
Confidence 368999999999999998888754
No 97
>COG2050 PaaI HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=33.05 E-value=1.7e+02 Score=25.22 Aligned_cols=65 Identities=9% Similarity=-0.061 Sum_probs=43.1
Q ss_pred ceeeccccCccCCccchHHHHHHHHHhCCcchhcc----Cc--eEEEEEEEecccCCCCeEEEEEEEcCCCe
Q 015458 267 DLKPKRSDLDMNHHVNNVKYVRWMLETIPDRILES----NQ--LSGITLEYRRECGGSDVVQSLCQPDEDGI 332 (406)
Q Consensus 267 ~~~vR~sDiD~ngHVNN~~Y~~w~~e~lp~e~~~~----~~--l~~i~i~Y~~E~~~gd~v~~~t~v~~~~~ 332 (406)
.+.+.-..+-..|=++=-..+..+..+........ .. -.++.++|.++.+.|+ +.....+...|.
T Consensus 39 ~l~~~~~~~~~~G~~HGG~i~alaD~a~~~a~~~~~~~~~~~~ti~l~i~flr~~~~g~-v~a~a~v~~~G~ 109 (141)
T COG2050 39 TLPVDPELLNPGGILHGGVIAALADSAAGLAANSLLGVVALAVTLELNINFLRPVKEGD-VTAEARVLHLGR 109 (141)
T ss_pred EeecCHHHcCCCceeeHHHHHHHHHHHHHHHHhhccCccceeEEEEEEehhccCCCCCe-EEEEEEEEeeCC
Confidence 45555555557777777777777766643222111 11 2488899999999999 888888776643
No 98
>PF02551 Acyl_CoA_thio: Acyl-CoA thioesterase; InterPro: IPR003703 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH). They consequently have the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. They may also be involved in the metabolic regulation of peroxisome proliferation. Thioesters play a central role in cells as they participate in metabolism, membrane synthesis, signal transduction, and gene regulation. Thioesterases catalyse the hydrolysis of thioesters to the thiol and carboxylic acid components. Many thioesterases have a hot dog fold, including YciA from Escherichia coli and its close sequence homologue HI0827 from Haemophilus influenzae (HiYciA) []. In Helicobacter pylori, YbgC also belongs to the hot-dog family of proteins, with a epsilongamma tetrameric arrangement []. YbgC proteins are bacterial acyl-CoA thioesterases associated with the Tol-Pal system. This system is important for cell envelope integrity and is part of the cell division machinery. However, the E. coli thioesterase II reveals a new tertiary fold: a 'double hot dog'. It has an internal repeat with a basic unit that is structurally similar to the recently described beta-hydroxydecanoyl thiol ester dehydrase []. ; GO: 0016291 acyl-CoA thioesterase activity, 0006637 acyl-CoA metabolic process; PDB: 1C8U_B 1TBU_B 3U0A_B.
Probab=32.69 E-value=2.8e+02 Score=24.59 Aligned_cols=53 Identities=13% Similarity=0.011 Sum_probs=36.0
Q ss_pred EEEeEEeEeccCCCCCEEEEEEEE-eeeCCcEEEEEEEEEecCCCcEEEEEEEEE
Q 015458 162 VSRMQVEIDHYPIWGEVVEIDTWV-GASGKNGMRRDWLIRSQATGHIFARATSTW 215 (406)
Q Consensus 162 V~r~~Ie~~r~p~~gD~I~I~Twv-~~~g~~~~~Rdf~I~d~~~Gevia~AtS~w 215 (406)
-....|=|+|+++.+|-|.-.+.- .+.+..++.+. .+++.++|+++|.+....
T Consensus 77 SlDHs~wFHrpfr~ddWlLY~~~sp~A~~~Rgl~~G-~~f~~q~G~Lvas~~QEG 130 (131)
T PF02551_consen 77 SLDHSMWFHRPFRADDWLLYAIESPSASGGRGLVRG-RFFDTQDGELVASVVQEG 130 (131)
T ss_dssp EEEEEEEE-S--BTTS-EEEEEEEEEEETTEEEEEE-CCEEECTTEEEEEEEEEE
T ss_pred ecceeEEEcCCCCCCCCEEEEEEcCccccCcccccC-ceEecCCCCEEEEEecCC
Confidence 667888999999999988888765 45566666554 445337999999977654
No 99
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=31.71 E-value=2.3e+02 Score=27.10 Aligned_cols=54 Identities=7% Similarity=-0.035 Sum_probs=39.1
Q ss_pred EEEEeEEeEeccCCCCCEEEEEEEEeeeC-CcEEEEEEEEEecCCCcEEEEEEEEEE
Q 015458 161 VVSRMQVEIDHYPIWGEVVEIDTWVGASG-KNGMRRDWLIRSQATGHIFARATSTWV 216 (406)
Q Consensus 161 VV~r~~Ie~~r~p~~gD~I~I~Twv~~~g-~~~~~Rdf~I~d~~~Gevia~AtS~wV 216 (406)
.-..+.|.|+++...+|-+..+++....+ ..+.. .=.|+| ++|+++|.+...-+
T Consensus 215 aSldhtv~fh~~~~~~~W~l~~~~s~~~~~Grg~~-~~~l~d-~~G~lvAs~~Qe~l 269 (271)
T TIGR00189 215 ASLDHSIWFHRPFRADDWLLYKCSSPSASGSRGLV-EGKIFT-RDGVLIASTVQEGL 269 (271)
T ss_pred EeeeeeEEEeCCCCCCeeEEEEEEeccccCCceEE-EEEEEC-CCCCEEEEEEeeee
Confidence 45567888989878899999988876443 22333 246786 89999998876644
No 100
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=31.63 E-value=1.4e+02 Score=33.18 Aligned_cols=49 Identities=10% Similarity=0.020 Sum_probs=37.3
Q ss_pred EEeEeccCCCCCEEEEEEEEeeeC-----Cc-EEEEEEEEEecCCCcEEEEEEEEE
Q 015458 166 QVEIDHYPIWGEVVEIDTWVGASG-----KN-GMRRDWLIRSQATGHIFARATSTW 215 (406)
Q Consensus 166 ~Ie~~r~p~~gD~I~I~Twv~~~g-----~~-~~~Rdf~I~d~~~Gevia~AtS~w 215 (406)
+++|.+|.+.||+|+++..+.... +. .+..+..+.+ ++|+++.++....
T Consensus 617 ~~rF~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~n-q~G~~V~~~~~~~ 671 (675)
T PRK11563 617 NLRFLTPVKPGDTIQVRLTCKRKTPRRQAPYGVVRWDVEVTN-QDGELVATYDILT 671 (675)
T ss_pred eEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEEE-CCCCEEEEEEEHH
Confidence 799999999999999999987652 11 2455667776 7899888876643
No 101
>PLN02864 enoyl-CoA hydratase
Probab=31.52 E-value=2e+02 Score=28.87 Aligned_cols=51 Identities=10% Similarity=0.111 Sum_probs=35.7
Q ss_pred EEEEEeEEeEeccCCCCCEEEEEEEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEE
Q 015458 160 WVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTW 215 (406)
Q Consensus 160 WVV~r~~Ie~~r~p~~gD~I~I~Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~w 215 (406)
-.+.++.++|.+|...||+|.++.|.. ++. .. |.+...++|+++..+....
T Consensus 253 ~~~~~~~~rF~~PV~pGdtl~~~~~~~--~~~-v~--~~~~~~~~g~~vl~G~a~~ 303 (310)
T PLN02864 253 TAVKTISGRFLLHVYPGETLVTEMWLE--GLR-VI--YQTKVKERNKAVLSGYVDL 303 (310)
T ss_pred ceEEEEEEEEcCCccCCCEEEEEEEeC--CCE-EE--EEEEEecCCeEEEEEEEEE
Confidence 356788999999999999999999864 222 22 3333336788777776543
No 102
>PF01575 MaoC_dehydratas: MaoC like domain; InterPro: IPR002539 The C terminus of the MaoC protein is found to share similarity with a wide variety of enzymes. All these enzymes contain multiple domains. This domain is found in parts of two enzymes that have been assigned dehydratase activities. A deletion mutant of the C-terminal 271 amino acids in Q02207 from SWISSPROT abolished its 2-enoyl-CoA hydratase activity, suggesting that this region may be a hydratase enzyme []. The maoC gene is part of a operon with maoA which is involved in the synthesis of monoamine oxidase [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1PN4_C 1PN2_B 1S9C_K 3OML_A 1Q6W_B 2B3M_A 3K67_B ....
Probab=30.90 E-value=70 Score=26.90 Aligned_cols=51 Identities=8% Similarity=0.066 Sum_probs=33.1
Q ss_pred cCCccchHHHHHHHHHhCCcchhccCceEEEEEEEecccCCCCeEEEEEEEcC
Q 015458 277 MNHHVNNVKYVRWMLETIPDRILESNQLSGITLEYRRECGGSDVVQSLCQPDE 329 (406)
Q Consensus 277 ~ngHVNN~~Y~~w~~e~lp~e~~~~~~l~~i~i~Y~~E~~~gd~v~~~t~v~~ 329 (406)
..|....+.-..++.+.++.. ....+.++++.|++|++.||.|.+..++.+
T Consensus 53 vhG~~~~a~~~~~~~~~~~~~--~~~~~~~~~~rF~~PV~~gdtl~~~~~v~~ 103 (122)
T PF01575_consen 53 VHGMLTLALASGLLGDWLGPN--PPARLGRFNVRFRAPVFPGDTLTAEVEVTE 103 (122)
T ss_dssp -BHHHHHHHHHHHHHHHHSTT--ECEEEEEEEEEESS--BTTEEEEEEEEEEE
T ss_pred EccHHHHHHHHHHHHHhccCc--cceEEEEEEEEEeccccCCCEEEEEEEEEE
Confidence 344444444445555555432 123578999999999999999999998876
No 103
>cd03450 NodN NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.
Probab=29.51 E-value=4e+02 Score=23.56 Aligned_cols=30 Identities=10% Similarity=-0.273 Sum_probs=24.1
Q ss_pred EEEEEEeEEeEeccCCCCCEEEEEEEEeee
Q 015458 159 IWVVSRMQVEIDHYPIWGEVVEIDTWVGAS 188 (406)
Q Consensus 159 ~WVV~r~~Ie~~r~p~~gD~I~I~Twv~~~ 188 (406)
++.+...+++|.+|.+-||+|+++..+.+.
T Consensus 84 ~~~~g~~~~rF~~PV~~GDtl~~~~~V~~~ 113 (149)
T cd03450 84 GVNYGLDKVRFPAPVPVGSRVRGRFTLLSV 113 (149)
T ss_pred EEEeeccEEEeCcceeCCcEEEEEEEEEEE
Confidence 344455689999999999999999988643
No 104
>cd03447 FAS_MaoC FAS_MaoC, the MaoC-like hot dog fold of the fatty acid synthase, beta subunit. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and 17-beta-hydroxysteriod dehydrogenase (HSD).
Probab=29.37 E-value=3.6e+02 Score=22.98 Aligned_cols=27 Identities=7% Similarity=-0.004 Sum_probs=23.1
Q ss_pred ceEEEEEEEecccCCCCeEEEEEEEcC
Q 015458 303 QLSGITLEYRRECGGSDVVQSLCQPDE 329 (406)
Q Consensus 303 ~l~~i~i~Y~~E~~~gd~v~~~t~v~~ 329 (406)
.+.+.++.|++|++.||+|.+..++.+
T Consensus 69 ~~~~~~~rf~~PV~~gdtl~~~~~v~~ 95 (126)
T cd03447 69 RVRSFTASFVGMVLPNDELEVRLEHVG 95 (126)
T ss_pred eEEEEEEEEcccCcCCCEEEEEEEEEE
Confidence 456789999999999999999887664
No 105
>PLN02868 acyl-CoA thioesterase family protein
Probab=28.90 E-value=1.6e+02 Score=30.54 Aligned_cols=54 Identities=9% Similarity=-0.091 Sum_probs=45.5
Q ss_pred EEEeEEeEeccCCCCCEEEEEEEEeeeCCcEEEEEEEEEecCCCcEEEEEEEEEEE
Q 015458 162 VSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVM 217 (406)
Q Consensus 162 V~r~~Ie~~r~p~~gD~I~I~Twv~~~g~~~~~Rdf~I~d~~~Gevia~AtS~wVl 217 (406)
+..+++.|.++...+..|++++..-.-||.+..|.-..+ ++|++++.+...+..
T Consensus 183 ~~s~~~~Fl~~~~~~~pv~~~V~~lr~Grs~~~r~v~~~--Q~g~~~~~~~~sf~~ 236 (413)
T PLN02868 183 VHSLHAYFLLVGDINLPIIYQVERIRDGHNFATRRVDAI--QKGKVIFTLFASFQK 236 (413)
T ss_pred ceEeeeeecCCCCCCCCEEEEEEEEcCCCceEeeEEEEE--ECCeeEEEEeecccc
Confidence 668889999999988899999999999999998877776 689998888766543
No 106
>COG1946 TesB Acyl-CoA thioesterase [Lipid metabolism]
Probab=28.48 E-value=6.2e+02 Score=25.42 Aligned_cols=105 Identities=16% Similarity=0.159 Sum_probs=66.9
Q ss_pred EEEEeeecCCCCCCCcCHHHHHHHHHHHHHHHHHhhccccCCCCcccccccCCeEEEEEEeEEeEeccCCCCCEEEEEEE
Q 015458 105 QTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTW 184 (406)
Q Consensus 105 ~~~~VR~~E~D~~G~v~~~~yl~ylQEAa~~h~~~~~~l~~Gfg~~~~m~~~gl~WVV~r~~Ie~~r~p~~gD~I~I~Tw 184 (406)
+.+-||...-=++-..-+..++.|+-+--.-... +...|.+. ...++.-+-....|-|+||.+.+|-|.-.+.
T Consensus 178 ~~vWira~~~~pdd~~~~~~lLay~SD~~ll~ta---l~~Hg~~~----~~~~~~~aSLDHs~wFhrp~~~ddWlLy~~~ 250 (289)
T COG1946 178 QQVWIRARGELPDDPRLHQALLAYLSDFTLLDTA---LQPHGLGF----LTPGIQVASLDHSMWFHRPFRLDDWLLYAQE 250 (289)
T ss_pred eeEEEEcCCCCCCCHHHHHHHHHHhccchhhhhh---hccCCCcc----ccCcceEeeccceEEEeccccCCCEEEEEee
Confidence 4455666554455556666777777774322211 11123221 2345555566788999999999998888877
Q ss_pred Ee-eeCCcEEEEEEEEEecCCCcEEEEEEEEEEEE
Q 015458 185 VG-ASGKNGMRRDWLIRSQATGHIFARATSTWVMM 218 (406)
Q Consensus 185 v~-~~g~~~~~Rdf~I~d~~~Gevia~AtS~wVl~ 218 (406)
.. ..+..++.|. .|++ ++|+++|......++-
T Consensus 251 sp~A~~~rgl~~G-~lf~-r~G~LiA~~~QEG~~r 283 (289)
T COG1946 251 SPSASGGRGLVRG-QLFD-RDGQLIASVVQEGLIR 283 (289)
T ss_pred CCcccCCcceeee-EEEc-CCCCEEEEEeeeEEEe
Confidence 64 4455666665 4665 7999999988777664
No 107
>PF11456 DUF3019: Protein of unknown function (DUF3019); InterPro: IPR021559 This is a bacterial family of uncharacterised proteins.
Probab=24.65 E-value=1.9e+02 Score=24.32 Aligned_cols=34 Identities=21% Similarity=0.373 Sum_probs=25.4
Q ss_pred EEEEEecCCCcEEEEEEEEEEEEecCCCceecCC
Q 015458 196 DWLIRSQATGHIFARATSTWVMMNQQTRRLSKIP 229 (406)
Q Consensus 196 df~I~d~~~Gevia~AtS~wVl~D~~tRRpvrIP 229 (406)
.|.++|..++.++|.+......+..++||-.|-|
T Consensus 66 ~f~L~~~~~~~~la~~~v~V~~~~~k~Rrr~r~p 99 (102)
T PF11456_consen 66 QFSLRDSDTGQPLAQVKVKVTWVSPKVRRRRRNP 99 (102)
T ss_pred EEEEEeCCCCcEEEEEEEEEEEeccCcCCccCCC
Confidence 4788888888889988777777767777765544
No 108
>cd03452 MaoC_C MaoC_C The C-terminal hot dog fold of the MaoC (monoamine oxidase C) dehydratase regulatory protein. Orthologs of MaoC include PaaZ [Escherichia coli] and PaaN [Pseudomonas putida], which are putative ring-opening enzymes involved in phenylacetic acid degradation. The C-terminal domain of MaoC has sequence similarity to (R)-specific enoyl-CoA hydratase,Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. MaoC also has an N-terminal PutA domain like that found in the E. coli PutA proline dehydrogenase and other members of the aldehyde dehydrogenase family.
Probab=22.63 E-value=2.7e+02 Score=24.09 Aligned_cols=23 Identities=13% Similarity=0.052 Sum_probs=20.5
Q ss_pred EEEEEecccCCCCeEEEEEEEcC
Q 015458 307 ITLEYRRECGGSDVVQSLCQPDE 329 (406)
Q Consensus 307 i~i~Y~~E~~~gd~v~~~t~v~~ 329 (406)
-++.|++|++.||+|.....+.+
T Consensus 81 ~~~rf~~PV~~GDtl~~~~~V~~ 103 (142)
T cd03452 81 ENLRFLEPVYPGDTIQVRLTCKR 103 (142)
T ss_pred ceEEECCCCCCCCEEEEEEEEEE
Confidence 38999999999999999888764
No 109
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=21.81 E-value=4.3e+02 Score=25.92 Aligned_cols=56 Identities=13% Similarity=0.021 Sum_probs=42.5
Q ss_pred EEEEEeEEeEeccCCCCCEEEEEEEEeee-CCcEEEEEEEEEecCCCcEEEEEEEEEEE
Q 015458 160 WVVSRMQVEIDHYPIWGEVVEIDTWVGAS-GKNGMRRDWLIRSQATGHIFARATSTWVM 217 (406)
Q Consensus 160 WVV~r~~Ie~~r~p~~gD~I~I~Twv~~~-g~~~~~Rdf~I~d~~~Gevia~AtS~wVl 217 (406)
-.-..+.|.|+++++.+|-+..+++.... +..++.+- .|++ ++|+++|.+...-++
T Consensus 226 ~aSLdhsi~Fh~~~~~d~W~L~~~~s~~a~~gr~~~~g-~i~~-~~G~LvAs~~Qegl~ 282 (286)
T PRK10526 226 IATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRG-EFYT-QDGVLVASTVQEGVM 282 (286)
T ss_pred EEeeeEeEEEeCCCCCCceEEEEEECCcccCCceEEEE-EEEC-CCCCEEEEEEeeEEE
Confidence 34567888999999999999999988644 33344443 6776 899999999887665
No 110
>PRK13693 (3R)-hydroxyacyl-ACP dehydratase subunit HadB; Provisional
Probab=21.38 E-value=5.5e+02 Score=22.35 Aligned_cols=52 Identities=12% Similarity=0.091 Sum_probs=33.8
Q ss_pred EEeEEeEeccCCCC-C----EEEEEEEEeee--CCcEEEEEEEEEecCCCcEEEEEEEEE
Q 015458 163 SRMQVEIDHYPIWG-E----VVEIDTWVGAS--GKNGMRRDWLIRSQATGHIFARATSTW 215 (406)
Q Consensus 163 ~r~~Ie~~r~p~~g-D----~I~I~Twv~~~--g~~~~~Rdf~I~d~~~Gevia~AtS~w 215 (406)
.++.++|.+|...| | +|+++..+.+. ++.....+..+.+ ++++++++|..+.
T Consensus 81 ~~~~~rF~~pv~~g~D~~~~~l~~~~~V~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~ 139 (142)
T PRK13693 81 TEYNVRFTAVVPVPNDGKGAELVFNGRVKSVDPESKSVTIALTATT-GGKKIFGRAIASA 139 (142)
T ss_pred EEEEEEecccEECCCCccceEEEEEEEEEEeccCCcEEEEEEEEEE-CCcEEEEEEEEEE
Confidence 46899999999865 3 88888888654 3334445555663 4555566665543
No 111
>cd03448 HDE_HSD HDE_HSD The R-hydratase-like hot dog fold of the 17-beta-hydroxysteriod dehydrogenase (HSD), and Hydratase-Dehydrogenase-Epimerase (HDE) proteins. Other enzymes with this fold include MaoC dehydratase, and the fatty acid synthase beta subunit.
Probab=21.19 E-value=1.5e+02 Score=25.20 Aligned_cols=27 Identities=4% Similarity=0.133 Sum_probs=23.0
Q ss_pred ceEEEEEEEecccCCCCeEEEEEEEcC
Q 015458 303 QLSGITLEYRRECGGSDVVQSLCQPDE 329 (406)
Q Consensus 303 ~l~~i~i~Y~~E~~~gd~v~~~t~v~~ 329 (406)
.+..+++.|++|++.||+|.+..+..+
T Consensus 71 ~~~~~~~rF~~PV~~gDtl~~~~~~~~ 97 (122)
T cd03448 71 RFKAIKVRFSSPVFPGETLRTEMWKEG 97 (122)
T ss_pred eeEEEEEEEcCCccCCCEEEEEEEEeC
Confidence 467889999999999999999887543
Done!