BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 015460
         (406 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O43670|ZN207_HUMAN Zinc finger protein 207 OS=Homo sapiens GN=ZNF207 PE=1 SV=1
          Length = 478

 Score =  142 bits (358), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 59/87 (67%), Positives = 72/87 (82%), Gaps = 1/87 (1%)

Query: 1  MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
          MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct: 1  MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query: 61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
          E +  VPNA PGR   ++EIYGM+GIP
Sbjct: 60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86


>sp|Q5R8K4|ZN207_PONAB Zinc finger protein 207 OS=Pongo abelii GN=ZNF207 PE=2 SV=1
          Length = 494

 Score =  140 bits (354), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 59/87 (67%), Positives = 71/87 (81%), Gaps = 1/87 (1%)

Query: 1  MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
          MG+KKK+   K WC+YC+R+FDDEKIL QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct: 1  MGRKKKK-QLKPWCWYCNRDFDDEKILTQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query: 61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
          E +  VPNA PGR   ++EIYGM+GIP
Sbjct: 60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86


>sp|Q8NI51|CTCFL_HUMAN Transcriptional repressor CTCFL OS=Homo sapiens GN=CTCFL PE=1 SV=2
          Length = 663

 Score = 43.5 bits (101), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 14  CYYCDRE-FDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV 63
           C Y  R+ +  ++ +  H   K ++CH+CH + + +G M IH+LQ H ENV
Sbjct: 375 CSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHILQKHGENV 425


>sp|P39806|SALM_DROVI Homeotic protein spalt-major OS=Drosophila virilis GN=salm PE=2
           SV=1
          Length = 1402

 Score = 41.2 bits (95), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 6/81 (7%)

Query: 2   GKKKKRVSSKVWCYYCDREFDDEKILVQHQKA----KHFKCHVCHKKLSTAGGMAIHVLQ 57
           GK +     K  C YC + F  +  L  H ++    + FKC+VC  + +T G + +H  Q
Sbjct: 422 GKGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVH-FQ 480

Query: 58  VHKENVTKVP-NAKPGRESTD 77
            H +    VP NA P  E  D
Sbjct: 481 RHAQKFPHVPMNATPIPEHMD 501



 Score = 40.0 bits (92), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 5/61 (8%)

Query: 4   KKKRVSSKVWCYYCDREFDDEKILVQHQKA----KHFKCHVCHKKLSTAGGMAIHVLQVH 59
           K K++S    C  CDR    +  L  H +     + FKC +C +  +T G +  H + VH
Sbjct: 837 KNKKISDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTH-MAVH 895

Query: 60  K 60
           K
Sbjct: 896 K 896


>sp|Q80YR4|ZN598_MOUSE Zinc finger protein 598 OS=Mus musculus GN=Znf598 PE=2 SV=1
          Length = 908

 Score = 33.5 bits (75), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 13  WCYYCDREFDDEKILVQHQKAKHFKCHVC 41
            C +CD  + D   L++H +  H+ CH C
Sbjct: 186 LCKFCDERYLDNDELLKHLRRDHYFCHFC 214


>sp|Q9HEC9|SEC16_NEUCR COPII coat assembly protein sec-16 OS=Neurospora crassa (strain ATCC
            24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
            GN=sec-16 PE=3 SV=1
          Length = 2084

 Score = 32.3 bits (72), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 15/101 (14%)

Query: 147  VPPAGWPVPPRPQPWYPQ--HAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQPS 204
             PP G   PPRP    P    + V   PP+AVG    PL P  +  PP A   SP + P+
Sbjct: 1975 APPTG---PPRPAALMPSASESNVGSGPPSAVG----PLSPSGSNGPPSAGLLSPGMGPA 2027

Query: 205  PVVPPGMPS-STPPVTVSQPLFPVVNNNTTSQSSLFSAPIP 244
             +  P   S S PP   S+PL     + T+S   L  A +P
Sbjct: 2028 AMQRPASTSTSGPPAGTSKPL-----SATSSIDDLLGAAVP 2063


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.131    0.405 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 163,459,337
Number of Sequences: 539616
Number of extensions: 7674963
Number of successful extensions: 54814
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 2078
Number of HSP's that attempted gapping in prelim test: 39125
Number of HSP's gapped (non-prelim): 10358
length of query: 406
length of database: 191,569,459
effective HSP length: 120
effective length of query: 286
effective length of database: 126,815,539
effective search space: 36269244154
effective search space used: 36269244154
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)