BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015462
(406 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D N DG + +E ++ A G + + EEL K DKN DG + DE
Sbjct: 20 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 72
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D N DG + +E ++ A G + + EEL K DKN DG + DE
Sbjct: 100 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D N DG + +E ++ A G + + EEL K DKN DG + DE
Sbjct: 12 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 64
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D N DG + +E ++ A G + + EEL K DKN DG + DE
Sbjct: 10 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 62
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 187 IVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
I D N DG + +E +++ A G V E+L K +DKN DG + DE
Sbjct: 104 IFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 153
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 187 IVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
I D N DG + +E +++ A G V E+L K +DKN DG + DE
Sbjct: 104 IFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 153
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 187 IVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
I D N DG + +E +++ A G V E+L K +DKN DG + DE
Sbjct: 104 IFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 153
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D N DG + +E ++ A G + + EEL K DKN DG + DE
Sbjct: 15 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 67
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 187 IVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
I D N DG + +E +++ A G V E+L K +DKN DG + DE
Sbjct: 101 IFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 150
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D N DG + +E ++ A G + + EEL K DKN DG + DE
Sbjct: 100 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D N DG + +E ++ A G + + EEL K DKN DG + DE
Sbjct: 100 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ I D N DG + +E +++ A G V + E L K DKN DG + DE
Sbjct: 98 LFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDE 150
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 185 LSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
I D N DG + +E +++ A G V E+L K +DKN DG + DE
Sbjct: 16 FRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 67
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D N DG + E ++ A G + + EEL K DKN DG + DE
Sbjct: 100 LFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Score = 28.1 bits (61), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 192 QDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+DG +S KE ++ G + +E+ D++G G V DE
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D N DG + E ++ A G + + EEL K DKN DG + DE
Sbjct: 11 LFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 63
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 187 IVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
I D N DG + +E +++ A G V E+L K +DKN DG + DE
Sbjct: 104 IFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 153
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D N DG + E ++ A G + + EEL K DKN DG + DE
Sbjct: 100 LFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D N DG + E ++ A G + + EEL K DKN DG + DE
Sbjct: 100 LFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 187 IVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
I D N DG + +E +++ A G V + E L K DKN DG + DE
Sbjct: 101 IFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDE 150
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 189 DYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
D N DG + E ++ A G + + EEL K DKN DG + DE
Sbjct: 105 DKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 153 DPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQV 212
D S S K +GK+ + ++P E + ++ VD + G + F EF ++
Sbjct: 33 DGSISTKELGKV-MRMLGQNPTPEE---LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDD 88
Query: 213 AANKKEE----LFKAADKNGDGVVSVDE 236
+ K EE LF+ DKN DG + +DE
Sbjct: 89 SKGKSEEELSDLFRMWDKNADGYIDLDE 116
Score = 28.1 bits (61), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 192 QDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+DG +S KE ++ G + +E+ D++G G V DE
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ I+ + D N DGQ++ EF+ ++A G A + E F D NG+G +S+DE
Sbjct: 105 KGIVGMCDKNADGQINADEFAAWLTALGMSKA--EAAEAFNQVDTNGNGELSLDE 157
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 181 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
A+R+ D N+DG+LS EF ++ AF + F+ D +G+G ++ DE
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADE 58
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
P + + FA + ++ D + +G + F+EF ++S K F+ D N DG +
Sbjct: 57 PFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYI 116
Query: 233 SVDE 236
+ DE
Sbjct: 117 TFDE 120
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 15/83 (18%)
Query: 166 LSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA----FGNQVAANKKE--- 218
LS + +E + S+A + D N DG ++F E ++++ G+ V N+ E
Sbjct: 89 LSTTSRGTLEEKLSWA---FELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATP 145
Query: 219 -----ELFKAADKNGDGVVSVDE 236
++FK DKN DG +++DE
Sbjct: 146 EMRVKKIFKLMDKNEDGYITLDE 168
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 189 DYNQDGQLSFKEFSDLISAF-GNQVAANKKEELFKAADKNGDGVVSVDE 236
D N DG++S E + + A G+QV EE+ + D NGDG V +E
Sbjct: 98 DTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 34.7 bits (78), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 183 RILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK-EELFKAADKNGDGVVSVDE 236
R + D N DG + F EF ++ G + + + EE K AD++G+GV+ + E
Sbjct: 12 RAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPE 66
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 7/57 (12%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKE----ELFKAADKNGDGVVSVDE 236
+++ +D + + Q+ F EF L+S Q+ +N E E FK DKNGDG++S E
Sbjct: 52 LMNEIDVDGNHQIEFSEFLALMS---RQLKSNDSEQELLEAFKVFDKNGDGLISAAE 105
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 132 VDLLEFLTKDSDADSEVFDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYN 191
D+ + K+ D + +L+D S K+ G+ +V D + E S IL D++
Sbjct: 349 TDIFRHIDKNGDGQLDRQELIDGYS--KLSGE---EVAVFDLPQIE-SEVDAILGAADFD 402
Query: 192 QDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
++G + + EF + + ++ +K E F+ D++G+G +SVDE
Sbjct: 403 RNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDE 447
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 10/68 (14%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKE----ELFKAADKNG 228
P E E +++ +D + + Q+ F EF L+S Q+ +N E E FK DKNG
Sbjct: 43 PSEAE---VNDLMNEIDVDGNHQIEFSEFLALMS---RQLKSNDSEQELLEAFKVFDKNG 96
Query: 229 DGVVSVDE 236
DG++S E
Sbjct: 97 DGLISAAE 104
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 10/68 (14%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKE----ELFKAADKNG 228
P E E +++ +D + + Q+ F EF L+S Q+ +N E E FK DKNG
Sbjct: 43 PSEAE---VNDLMNEIDVDGNHQIEFSEFLALMS---RQLKSNDSEQELLEAFKVFDKNG 96
Query: 229 DGVVSVDE 236
DG++S E
Sbjct: 97 DGLISAAE 104
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 189 DYNQDGQLSFKEFSDLISAF-GNQVAANKKEELFKAADKNGDGVVSVDE 236
D N DG++S E + + G+QV EE+ + D NGDG V +E
Sbjct: 112 DTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 160
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 189 DYNQDGQLSFKEFSDLISAF-GNQVAANKKEELFKAADKNGDGVVSVDE 236
D N DG++S E + + G+QV EE+ + D NGDG V +E
Sbjct: 98 DTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
P FA + ++ D N+DG++ F EF +S K FK D + DG +
Sbjct: 57 PFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYI 116
Query: 233 SVDE 236
+ +E
Sbjct: 117 TRNE 120
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
P K++A+ + D N DG L FKE+ + K E F D +G+G +
Sbjct: 57 PEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTI 116
Query: 233 SVDE 236
S +E
Sbjct: 117 SKNE 120
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 189 DYNQDGQLSFKEFSDLISAF-GNQVAANKKEELFKAADKNGDGVVSVDE 236
D N DG++S E + + G+QV EE+ + D NGDG V +E
Sbjct: 17 DTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
P K++A+ + D N DG L FKE+ + K E F D +G+G +
Sbjct: 58 PEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTI 117
Query: 233 SVDE 236
S +E
Sbjct: 118 SKNE 121
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
P K++A+ + D N DG L FKE+ + K E F D +G+G +
Sbjct: 57 PEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTI 116
Query: 233 SVDE 236
S +E
Sbjct: 117 SKNE 120
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
P K++A+ + D N DG L FKE+ + K E F D +G+G +
Sbjct: 57 PEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTI 116
Query: 233 SVDE 236
S +E
Sbjct: 117 SKNE 120
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 32/55 (58%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
R + D + +G +S E +++ G +++ + +E+ +AAD +GDG V+ +E
Sbjct: 86 REAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEE 140
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 32/53 (60%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
IL D++++G + + EF + + ++ +K E F+ D++G+G +SVDE
Sbjct: 112 ILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDE 164
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 12/67 (17%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEEL------------FKAADKNGD 229
R ++ D N+DG ++ +E D++ A + + A L F+ DKN D
Sbjct: 92 RWTFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKD 151
Query: 230 GVVSVDE 236
G+V++DE
Sbjct: 152 GIVTLDE 158
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 110 VARISVFETNRLSKSNLEGY-CEVDLLEFLTKDSDAD-SEVFDLLDPSSSNKI----VGK 163
V RI + + N+ G+ E +L + LT++ A+ E F L D I +G
Sbjct: 275 VNRIELKGIDFKEDGNILGHKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGT 334
Query: 164 ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK-EELFK 222
+ S ++P E E + +++ VD + DG + F EF +++ + ++ E F+
Sbjct: 335 VMRSLG-QNPTEAE---LQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFR 390
Query: 223 AADKNGDGVVSVDE 236
DK+G+G +S E
Sbjct: 391 VFDKDGNGYISAAE 404
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 110 VARISVFETNRLSKSNLEGY-CEVDLLEFLTKDSDAD-SEVFDLLDPSSSNKI----VGK 163
V RI + + N+ G+ E +L + LT++ A+ E F L D I +G
Sbjct: 275 VNRIELKGIDFKEDGNILGHKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGT 334
Query: 164 ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK-EELFK 222
+ S ++P E E + +++ VD + DG + F EF +++ + ++ E F+
Sbjct: 335 VMRSLG-QNPTEAE---LQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFR 390
Query: 223 AADKNGDGVVSVDE 236
DK+G+G +S E
Sbjct: 391 VFDKDGNGYISAAE 404
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 32.3 bits (72), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAF---GNQVAANKKEELFKAADKNGDGVVSVDE 236
+++ I+D ++DG + E ++ F ++A + + L A DK+GDG + V+E
Sbjct: 44 KKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 101
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 31/55 (56%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D +Q+G +S E +++ G ++ + +E+ + AD +GDG ++ DE
Sbjct: 87 KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDE 141
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D +Q+G +S E ++ G ++ + E++ K AD +GDG V+ +E
Sbjct: 12 KEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEE 66
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 12/67 (17%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISA----FGNQVAANKKEE--------LFKAADKNGD 229
R ++ D N+DG ++ +E D++ A G KE+ F+ DKN D
Sbjct: 128 RWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKD 187
Query: 230 GVVSVDE 236
G+V++DE
Sbjct: 188 GIVTLDE 194
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 12/64 (18%)
Query: 185 LSIVDYNQDGQLSFKEFSDLISAFGNQVAA------------NKKEELFKAADKNGDGVV 232
++ D N+DG ++ +E D++ A + + E F+ DKN DGVV
Sbjct: 144 FNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVV 203
Query: 233 SVDE 236
++DE
Sbjct: 204 TIDE 207
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 183 RILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D ++ G++SFK + G + + +E+ AD++GDG VS E
Sbjct: 15 KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQE 68
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 12/67 (17%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISA----FGNQVAANKKEE--------LFKAADKNGD 229
R ++ D N+DG ++ +E D++ A G KE+ F+ DKN D
Sbjct: 92 RWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKD 151
Query: 230 GVVSVDE 236
G+V++DE
Sbjct: 152 GIVTLDE 158
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
P K++A+ + D N DG L FK++ + K E F D +G+G +
Sbjct: 57 PEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTI 116
Query: 233 SVDE 236
S +E
Sbjct: 117 SKNE 120
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 183 RILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D ++ G++SFK + G + + +E+ AD++GDG VS E
Sbjct: 25 KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQE 78
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
P K++A+ + D N DG L FK++ + K E F D +G+G +
Sbjct: 57 PEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTI 116
Query: 233 SVDE 236
S +E
Sbjct: 117 SKNE 120
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 12/67 (17%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISA----FGNQVAANKKEE--------LFKAADKNGD 229
R ++ D N+DG ++ +E D++ A G KE+ F+ DKN D
Sbjct: 95 RWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKD 154
Query: 230 GVVSVDE 236
G+V++DE
Sbjct: 155 GIVTLDE 161
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D +Q+G +S E ++ G ++ + E++ K AD +GDG V+ +E
Sbjct: 7 KEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEE 61
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 183 RILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D ++ G++SFK + G + + +E+ AD++GDG VS E
Sbjct: 83 KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQE 136
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
Query: 177 EKSFARRILSIVDYNQDGQLSFKEFSDLISA------FGNQVAANKKEELFKAADKNGDG 230
E FAR I+SIVD N+ G ++F+ F D +S +QV A+ K A DKN
Sbjct: 760 EAEFAR-IMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASFK---ILAGDKN--- 812
Query: 231 VVSVDEXXXXXXXQQEKEPLMNCCPVCG 258
++VDE Q + + P G
Sbjct: 813 YITVDELRRELPPDQAEYCIARMAPYNG 840
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 200 EFSDLISAFGNQVAANKKE----ELFKAADKNGDGVVSVDE 236
EFS+ ++ Q+ N E E FK DKNGDG++S E
Sbjct: 65 EFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAE 105
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
P K++A+ + D N DG L FKE+ + K E F D +G+G +
Sbjct: 65 PDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTI 124
Query: 233 SVDE 236
S +E
Sbjct: 125 SKNE 128
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
P +FA + ++ D +++G + FKEF +S +K F+ D + +G++
Sbjct: 57 PFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLI 116
Query: 233 SVDE 236
S DE
Sbjct: 117 SYDE 120
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 31.6 bits (70), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Query: 150 DLLDPSSSNKIVGKISLSCSVEDPIE------TEKSFARRILSIVDYNQDGQLSFKEF 201
+LLD S + K+ +CSVE E T + RI +VD N DGQLS EF
Sbjct: 116 ELLDIVES---IYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEF 170
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 31.2 bits (69), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D +Q+G +S E ++ G ++ + E++ K AD +GDG V+ +E
Sbjct: 86 KEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEE 140
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 188 VDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+D ++DG +S EF + A G + +K F D N +G +S DE
Sbjct: 111 IDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDE 159
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVA---ANKKEELFKAADKNGDGVVSVDE 236
+++ I+D ++ G + E ++ F + A A + + L A DK+GDG + V+E
Sbjct: 44 KKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEE 101
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 110 VARISVFETNRLSKSNLEGY-CEVDLLEFLTKDSDAD-SEVFDLLDPSSSNKI----VGK 163
V RI + + N+ G+ E + + LT++ A+ E F L D I +G
Sbjct: 276 VNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGT 335
Query: 164 ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK-EELFK 222
+ S ++P E E + +++ VD + +G + F EF +++ + + ++ E F+
Sbjct: 336 VMRSLG-QNPTEAE---LQDMINEVDADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFR 391
Query: 223 AADKNGDGVVSVDE 236
DK+G+G +S E
Sbjct: 392 VFDKDGNGYISAAE 405
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Query: 110 VARISVFETNRLSKSNLEGY-CEVDLLEFLTKDSDAD-SEVFDLLDPSSSNKI----VGK 163
V RI + + N+ G+ E + + LT++ A+ E F L D I +G
Sbjct: 275 VNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGT 334
Query: 164 ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS-AFGNQVAANKKEELFK 222
+ S ++P E E + +++ VD + DG + F EF +++ + + + E F+
Sbjct: 335 VMRSLG-QNPTEAE---LQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFR 390
Query: 223 AADKNGDGVVSVDE 236
DK+G+G +S E
Sbjct: 391 VFDKDGNGYISAAE 404
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 183 RILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D ++ G++SFK + G + + +E+ AD++GDG V+ +E
Sbjct: 85 KAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVNEEE 138
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 188 VDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+D ++DG +S EF + A G + +K F D N +G +S DE
Sbjct: 111 IDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDE 159
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Query: 110 VARISVFETNRLSKSNLEGY-CEVDLLEFLTKDSDAD-SEVFDLLDPSSSNKI----VGK 163
V RI + + N+ G+ E + + LT++ A+ E F L D I +G
Sbjct: 276 VNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGT 335
Query: 164 ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK-EELFK 222
+ S ++P E E + +++ VD + DG + F EF +++ + ++ E F+
Sbjct: 336 VMRSLG-QNPTEAE---LQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFR 391
Query: 223 AADKNGDGVVSVDE 236
DK+G+G +S E
Sbjct: 392 VFDKDGNGYISAAE 405
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 171 EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK-EELFKAADKNGD 229
++P E E + +++ + N +GQL+F EF +++ + ++ E FK D++GD
Sbjct: 41 QNPTEAE---LQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGD 97
Query: 230 GVVS 233
G +S
Sbjct: 98 GFIS 101
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 31/55 (56%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D +Q+G +S E +++ G ++ + +E+ + AD +GDG ++ +E
Sbjct: 87 KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 147 EVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFS 202
E F L D I +G + S ++P E E + +++ VD + DG + F EF
Sbjct: 306 EAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAE---LQDMINEVDADGDGTIDFPEF- 360
Query: 203 DLISAFGNQVAANKKEEL---FKAADKNGDGVVSVDE 236
LI + +EE+ F+ DK+G+G +S E
Sbjct: 361 -LIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 396
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 176 TEKSFA--RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVS 233
TE+ A + S+ D + DG ++ KE ++ + G + +++ D +GDG +
Sbjct: 297 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 356
Query: 234 VDE 236
E
Sbjct: 357 FPE 359
>pdb|1NSH|A Chain A, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
pdb|1NSH|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
Length = 101
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 183 RILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAA 224
R++ +D N DGQL F+EF +LI G VA + E KAA
Sbjct: 58 RMMKKLDLNSDGQLDFQEFLNLIG--GLAVACH--ESFVKAA 95
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 147 EVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFS 202
E F L D I +G + S ++P E E + +++ VD + +G + F EF
Sbjct: 10 EAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAE---LQDMINEVDADGNGTIDFPEFL 65
Query: 203 DLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+++ + + E F+ DK+G+G +S E
Sbjct: 66 TMMARKMKDTDSEEIREAFRVFDKDGNGYISAAE 99
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 26/64 (40%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
P FA + D N DG + F+EF +S K + F D +G+G +
Sbjct: 57 PYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYI 116
Query: 233 SVDE 236
S E
Sbjct: 117 SKAE 120
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 147 EVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFS 202
E F L D I +G + S ++P E E + +++ VD + +G + F EF
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAE---LQDMINEVDADGNGTIDFPEFL 69
Query: 203 DLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+L++ + + K +E F+ DK+G+G +S E
Sbjct: 70 NLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAE 104
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 183 RILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D ++ G++SFK + G + + +E AD++GDG VS E
Sbjct: 108 KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVSEQE 161
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 31/55 (56%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D +Q+G +S E +++ G ++ + +E+ + AD +GDG ++ +E
Sbjct: 7 KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 61
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAF---GNQVAANKKEELFKAADKNGDGVVSVDE 236
+++ I+D ++ G + E ++ F ++A + + L A DK+GDG + V+E
Sbjct: 8 KKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 65
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAF---GNQVAANKKEELFKAADKNGDGVVSVDE 236
+++ I+D ++ G + E ++ F ++A + + L A DK+GDG + V+E
Sbjct: 44 KKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 101
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 19/102 (18%)
Query: 150 DLLDPSSSNKIVGKISLSCSVEDPIETEKSF------------ARRILSIVDYNQDGQLS 197
DLL+ K VG + S D + +K F +++ ++D ++ G +
Sbjct: 5 DLLNAEDIKKAVG----AFSATDSFDHKKFFQMVGLKKKSADDVKKVFHMLDKDKSGFIE 60
Query: 198 FKEFSDLISAF---GNQVAANKKEELFKAADKNGDGVVSVDE 236
E ++ F ++A + + L A DK+GDG + VDE
Sbjct: 61 EDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDE 102
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 176 TEKSFA--RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVS 233
TE+ A + S+ D + DG ++ KE ++ + G + +++ D +GDG +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 64
Query: 234 VDE 236
E
Sbjct: 65 FPE 67
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Query: 162 GKISLSCSVEDPIETEKSFA----RRILSIVDYNQDGQLSFKEFSDLISA 207
GKIS S + D ++T S RR+++ +D + DG +SF EF+D A
Sbjct: 26 GKIS-SSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARA 74
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 180 FARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + IVD +Q+G ++ E+ A G ++ EE F+ D + G + VDE
Sbjct: 110 WGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Query: 110 VARISVFETNRLSKSNLEGY-CEVDLLEFLTKDSDAD-SEVFDLLDPSSSNKI----VGK 163
V RI + + N+ G+ E + + LT++ A+ E F L D I +G
Sbjct: 277 VNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGT 336
Query: 164 ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS-AFGNQVAANKKEELFK 222
+ S ++P E E + +++ VD + +G + F EF +++ + + + E F+
Sbjct: 337 VMRSLG-QNPTEAE---LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFR 392
Query: 223 AADKNGDGVVSVDE 236
DK+G+G +S E
Sbjct: 393 VFDKDGNGYISAAE 406
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Query: 110 VARISVFETNRLSKSNLEGY-CEVDLLEFLTKDSDAD-SEVFDLLDPSSSNKI----VGK 163
V RI + + N+ G+ E + + LT++ A+ E F L D I +G
Sbjct: 276 VNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGT 335
Query: 164 ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS-AFGNQVAANKKEELFK 222
+ S ++P E E + +++ VD + +G + F EF +++ + + + E F+
Sbjct: 336 VMRSLG-QNPTEAE---LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFR 391
Query: 223 AADKNGDGVVSVDE 236
DK+G+G +S E
Sbjct: 392 VFDKDGNGYISAAE 405
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Query: 110 VARISVFETNRLSKSNLEGY-CEVDLLEFLTKDSDAD-SEVFDLLDPSSSNKI----VGK 163
V RI + + N+ G+ E + + LT++ A+ E F L D I +G
Sbjct: 276 VNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGT 335
Query: 164 ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS-AFGNQVAANKKEELFK 222
+ S ++P E E + +++ VD + +G + F EF +++ + + + E F+
Sbjct: 336 VMRSLG-QNPTEAE---LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFR 391
Query: 223 AADKNGDGVVSVDE 236
DK+G+G +S E
Sbjct: 392 VFDKDGNGYISAAE 405
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 147 EVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFS 202
E F L D I +G + S ++P E E + +++ VD + +G + F EF
Sbjct: 11 EAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAE---LQDMINEVDADGNGTIDFPEFL 66
Query: 203 DLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+L++ + + + +E F+ DK+G+G +S E
Sbjct: 67 NLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAE 101
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 147 EVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFS 202
E F L D I +G + S ++P E E + +++ VD + DG + F EF
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAE---LQDMINEVDADGDGTIDFPEFL 69
Query: 203 DLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+++ + + + E F+ DK+G+G +S E
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 104
Score = 28.1 bits (61), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 176 TEKSFA--RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVS 233
TE+ A + S+ D + DG ++ KE ++ + G + +++ D +GDG +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 64
Query: 234 VDE 236
E
Sbjct: 65 FPE 67
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 147 EVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFS 202
E F L D I +G + S ++P E E + +++ VD + +G + F EF
Sbjct: 14 EAFALFDKDGDGTITTKELGTVMRSLG-QNPTEAE---LQDMINEVDADGNGTIDFPEFL 69
Query: 203 DLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
L++ Q + + E FK D++G+G++S E
Sbjct: 70 SLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAE 104
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 147 EVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFS 202
E F L D I +G + S ++P E E + +++ VD + +G + F EF
Sbjct: 14 EAFALFDKDGDGTITTKELGTVMRSLG-QNPTEAE---LQDMINEVDADGNGTIDFPEFL 69
Query: 203 DLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
L++ Q + + E FK D++G+G++S E
Sbjct: 70 SLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAE 104
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAF---GNQVAANKKEELFKAADKNGDGVVSVDE 236
+++ +D + G + +E ++ +F G + + + KAADK+GDG + +DE
Sbjct: 45 KKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDE 102
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 180 FARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + IVD +Q+G ++ E+ A G ++ EE F+ D + G + VDE
Sbjct: 110 WGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Query: 110 VARISVFETNRLSKSNLEGY-CEVDLLEFLTKDSDAD-SEVFDLLDPSSSNKI----VGK 163
V RI + + N+ G+ E + + LT++ A+ E F L D I +G
Sbjct: 276 VNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGT 335
Query: 164 ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK-EELFK 222
+ S ++P E E + +++ VD + +G + F EF +++ + ++ E F+
Sbjct: 336 VMRSLG-QNPTEAE---LQDMINEVDADGNGTIDFPEFLTMMARKMKYTDSEEEIREAFR 391
Query: 223 AADKNGDGVVSVDE 236
DK+G+G +S E
Sbjct: 392 VFDKDGNGYISAAE 405
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Query: 110 VARISVFETNRLSKSNLEGY-CEVDLLEFLTKDSDAD-SEVFDLLDPSSSNKI----VGK 163
V RI + + N+ G+ E + + LT++ A+ E F L D I +G
Sbjct: 239 VNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGT 298
Query: 164 ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS-AFGNQVAANKKEELFK 222
+ S ++P E E + +++ VD + +G + F EF +++ + + + E F+
Sbjct: 299 VMRSLG-QNPTEAE---LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFR 354
Query: 223 AADKNGDGVVSVDE 236
DK+G+G +S E
Sbjct: 355 VFDKDGNGYISAAE 368
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 171 EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDG 230
E + EK + + ++D + DG+L+ +E + FG + ++ AD NGDG
Sbjct: 67 EQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQ----IMKADANGDG 122
Query: 231 VVSVDE 236
++++E
Sbjct: 123 YITLEE 128
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 147 EVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFS 202
E F L D I +G + S ++P E E + +++ VD + +G + F EF
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAE---LQDMINEVDADGNGTIDFPEFL 69
Query: 203 DLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+L++ + + + +E F+ DK+G+G +S E
Sbjct: 70 NLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAE 104
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 192 QDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+DG +S KE ++ G + +E+ D++G G V DE
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 192 QDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+DG +S KE ++ G + +E+ D++G G V DE
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 13/112 (11%)
Query: 135 LEFLTKDSDADS------EVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRIL 185
LE+ T+D + E F L D I K + ++P E E + ++
Sbjct: 263 LEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMI 319
Query: 186 SIVDYNQDGQLSFKEFSDLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ VD + +G + F EF +++ + + + E F+ DK+G+G +S E
Sbjct: 320 NEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 371
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 28.5 bits (62), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ I+D +Q+G +S E+ + G ++ EE F+ D + G + VDE
Sbjct: 114 LFDIIDKDQNGAISLDEWKAYTKSAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 148 VFDLLDPSSSNKIVGK--ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLI 205
F + D S KI K L + I+ E+ I+ VD N+DG++ F EF +++
Sbjct: 422 AFKMFDKDGSGKISTKELFKLFSQADSSIQMEE--LESIIEQVDNNKDGEVDFNEFVEML 479
Query: 206 SAF 208
F
Sbjct: 480 QNF 482
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 192 QDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+DG +S KE ++ G + +E+ D++G G V DE
Sbjct: 32 EDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 192 QDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+DG +S KE ++ G + +E+ D++G G V DE
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 147 EVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFS 202
E F L D I +G + S ++P E E + +++ VD + +G + F EF
Sbjct: 281 EAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAE---LQDMINEVDADGNGTIDFPEFL 336
Query: 203 DLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+++ + + + E F+ DK+G+G +S E
Sbjct: 337 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 371
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 28.1 bits (61), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA-FGNQVAANKK-EELFKAADKNGDG 230
P E + F + D NQ LS +E LI A F + + + ++LF+ DKNGDG
Sbjct: 6 PAELKSIFEKYAAKEGDPNQ---LSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDG 62
Query: 231 VVSVDE 236
VS +E
Sbjct: 63 EVSFEE 68
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 28.1 bits (61), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAF---GNQVAANKKEELFKAADKNGDGVVSVDE 236
+ I +D +Q G L E + F ++ ++ + L AAD +GDG + DE
Sbjct: 44 KDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADE 101
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 169 SVEDPIETEKSFARRILSI-VDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKN 227
+VE E +K+ + I V +DG +S KE ++ G + +E+ D++
Sbjct: 8 AVEQLTEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDED 67
Query: 228 GDGVVSVDE 236
G G V DE
Sbjct: 68 GSGTVDFDE 76
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 192 QDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+DG +S KE ++ G + +E+ D++G G V DE
Sbjct: 32 EDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,531,900
Number of Sequences: 62578
Number of extensions: 404949
Number of successful extensions: 1635
Number of sequences better than 100.0: 198
Number of HSP's better than 100.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 1236
Number of HSP's gapped (non-prelim): 405
length of query: 406
length of database: 14,973,337
effective HSP length: 101
effective length of query: 305
effective length of database: 8,652,959
effective search space: 2639152495
effective search space used: 2639152495
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)